BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019843
(335 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 154 bits (389), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 152/297 (51%), Gaps = 17/297 (5%)
Query: 31 RRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQ--CGGVFKSFDV 88
+RFS EL A+D FS N++GRG FG VYK R+ DG VAVK + GG + F
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ-FQT 84
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLY---SSNCVLDIFQRLNI 145
E E++ HRNL+++ C + LV YM +GS+ CL S LD +R I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 146 MIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
+ A L YLH +IH D+K +N+LLD+ A + DFG+AKL+ +D
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-V 203
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAG---EMTLKYWVSNL 262
TIG++APEY G+ S DV+ +G+ML+E T ++ D ++ L WV L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 263 LPISVME-IVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
L +E +VD +L K++ V + +A+ CT S +R E+V L
Sbjct: 264 LKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 150/297 (50%), Gaps = 17/297 (5%)
Query: 31 RRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQ--CGGVFKSFDV 88
+RFS EL A+D F N++GRG FG VYK R+ DG VAVK + GG + F
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ-FQT 76
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLY---SSNCVLDIFQRLNI 145
E E++ HRNL+++ C + LV YM +GS+ CL S LD +R I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 146 MIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
+ A L YLH +IH D+K +N+LLD+ A + DFG+AKL+ +D
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-V 195
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAG---EMTLKYWVSNL 262
IG++APEY G+ S DV+ +G+ML+E T ++ D ++ L WV L
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 263 LPISVME-IVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
L +E +VD +L K++ V + +A+ CT S +R E+V L
Sbjct: 256 LKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 161/303 (53%), Gaps = 17/303 (5%)
Query: 32 RFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECE 91
R ++L +AT+ F LIG G FG VYK ++DG +VA+K + + F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 92 VMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC---VLDIFQRLNIMID 148
+ RH +L+ +I C + L+ +YM +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
A L YLH + +IH D+K N+LLD+N V ++DFGI+K T DQ+ T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEM-TLKYW-VSNLLPIS 266
+GY+ PEY +GR++ DVYSFG++L E + + EM L W V +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL---LKIRD 323
+ +IVD NL + + + + + A++C S+E R + +++ +L L++++
Sbjct: 265 LEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
Query: 324 SLL 326
S++
Sbjct: 319 SVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 160/303 (52%), Gaps = 17/303 (5%)
Query: 32 RFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECE 91
R ++L +AT+ F LIG G FG VYK ++DG +VA+K + + F+ E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 92 VMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC---VLDIFQRLNIMID 148
+ RH +L+ +I C + L+ +YM +G+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
A L YLH + +IH D+K N+LLD+N V ++DFGI+K T Q+ T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEM-TLKYW-VSNLLPIS 266
+GY+ PEY +GR++ DVYSFG++L E + + EM L W V +
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL---LKIRD 323
+ +IVD NL + + + + + A++C S+E R + +++ +L L++++
Sbjct: 265 LEQIVDPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
Query: 324 SLL 326
S++
Sbjct: 319 SVI 321
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 116/231 (50%), Gaps = 19/231 (8%)
Query: 30 WRRFSYLELFQATDGFSE------NNLIGRGSFGSVYKARIQDGMEVAVK----VFHLQC 79
+ FS+ EL T+ F E N +G G FG VYK + + VAVK + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 80 GGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLE---KCLYSSNCV 136
+ + FD E +VM +H NL++++ S+ D LV YMP+GSL CL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPP 129
Query: 137 LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 196
L R I A + +LH + IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 197 DQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDK 247
Q+ ++ + T YMAPE R G ++ D+YSFG++L+E T D+
Sbjct: 187 AQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 30 WRRFSYLELFQATDGFSE------NNLIGRGSFGSVYKARIQDGMEVAVK----VFHLQC 79
+ FS+ EL T+ F E N +G G FG VYK + + VAVK + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 70
Query: 80 GGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLE---KCLYSSNCV 136
+ + FD E +VM +H NL++++ S+ D LV YMP+GSL CL
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPP 129
Query: 137 LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 196
L R I A + +LH + IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 197 DQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDK 247
Q+ + + T YMAPE R G ++ D+YSFG++L+E T D+
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 30 WRRFSYLELFQATDGFSE------NNLIGRGSFGSVYKARIQDGMEVAVK----VFHLQC 79
+ FS+ EL T+ F E N +G G FG VYK + + VAVK + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 64
Query: 80 GGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLE---KCLYSSNCV 136
+ + FD E +VM +H NL++++ S+ D LV YMP+GSL CL
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPP 123
Query: 137 LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 196
L R I A + +LH + IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 197 DQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDK 247
Q + + T YMAPE R G ++ D+YSFG++L+E T D+
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKV-----FHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG GSFG+V++A G +VAVK+ FH + F E +MK +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAE---RVNEFLREVAIMKRLRHPNIVLFM 100
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ ++V EY+ GSL + L+ S LD +RL++ DVA + YLH + P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVS 223
++H +LK N+L+D + DFG+++L S T +MAPE R+ +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 224 TNGDVYSFGIMLMETFTKKKP 244
DVYSFG++L E T ++P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 14/201 (6%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKV-----FHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG GSFG+V++A G +VAVK+ FH + F E +MK +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAE---RVNEFLREVAIMKRLRHPNIVLFM 100
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ ++V EY+ GSL + L+ S LD +RL++ DVA + YLH + P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPP 159
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVS 223
++H DLK N+L+D + DFG+++L T +MAPE R+ +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 224 TNGDVYSFGIMLMETFTKKKP 244
DVYSFG++L E T ++P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 271 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 133
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 194 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 251
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 252 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 140
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 201 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 258
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 259 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 141
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 202 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 259
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 260 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 270
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 271 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 138
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 199 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 256
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 257 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 253 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 253 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 139
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 200 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 257
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 258 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L + +D + L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 256 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 165
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 226 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 283
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD +
Sbjct: 284 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 109/224 (48%), Gaps = 19/224 (8%)
Query: 30 WRRFSYLELFQATDGFSE------NNLIGRGSFGSVYKARIQDGMEVAVK----VFHLQC 79
+ FS+ EL T+ F E N G G FG VYK + + VAVK + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 80 GGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLE---KCLYSSNCV 136
+ + FD E +V +H NL++++ S+ D LV Y P+GSL CL
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL-DGTPP 120
Query: 137 LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 196
L R I A + +LH + IH D+K +N+LLD+ A +SDFG+A+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 197 DQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
Q ++ + T Y APE R G ++ D+YSFG++L+E T
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIIT 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 132
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 250
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD +
Sbjct: 251 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 256 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 47/287 (16%)
Query: 51 IGRGSFGSVYKAR------IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G+FG V+ A +D M VAVK K F E E++ +++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYS---------------SNCVLDIFQRLNIMIDV 149
C + D +V EYM HG L K L + + L + Q L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A+ + YL S +H DL N L+ N++ + DFG+++ + D + T+ I
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+M PE + +T DV+SFG++L E FT K+P + +SN V+
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW-----------FQLSN---TEVI 245
Query: 269 E-IVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEI 314
E I +L R C V+++ + C +QR+N KEI
Sbjct: 246 ECITQGRVLER-------PRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 252
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 253 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++E++P+GSL + L +D + L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH DL N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 255
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 256 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 51 IGRGSFGSVYKAR---IQD--GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G+FGSV R +QD G VAVK + F+ E E++KS++H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 106 STCSNDDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
C + + L++EY+P+GSL L +D + L + +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 135
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
IH +L N+L+++ + DFG+ K+L + + K + + I + APE E +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 223 STNGDVYSFGIMLMETFT----KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-LLS 277
S DV+SFG++L E FT K P + M ++ ++E++ N L
Sbjct: 196 SVASDVWSFGVVLYELFTYIEKSKSPPAEFM--RMIGNDKQGQMIVFHLIELLKNNGRLP 253
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSL 325
R D C ++ + EC + QR + +++ R+ +IRD++
Sbjct: 254 RPDG-------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ + F++F E V++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ D+ A+V ++ SL K L+ +FQ ++I A ++YLH + +IH D
Sbjct: 102 TKDNL-AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRD 157
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
+K +N+ L + + + DFG+A + + S+ Q ++ +MAPE R S
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVYS+GI+L E T + P I
Sbjct: 218 SDVYSYGIVLYELMTGELPYSHI 240
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 46 SENNLIGRGSFGSVYKARIQDG---MEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
+ +IG G FG VYK ++ EV V + L+ G K F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL-HF 158
N+I++ S ++ EYM +G+L+K L + + Q + ++ +AA ++YL +
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA---TIGYMAPE 215
Y +H DL N+L++ N+V +SDFG++++L ED ++ T I + APE
Sbjct: 167 NY----VHRDLAARNILVNSNLVCKVSDFGLSRVL--EDDPEATYTTSGGKIPIRWTAPE 220
Query: 216 YGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDA 273
+ ++ DV+SFGI++ E T ++P YW +SN VM+ ++
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGERP------------YWELSNH---EVMKAIND 265
Query: 274 NLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSL 325
C S ++ L M+C + +R +IV+ +L++ DSL
Sbjct: 266 GF------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 125/292 (42%), Gaps = 50/292 (17%)
Query: 51 IGRGSFGSVYKARI------QDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G+FG V+ A QD M VAVK + F E E++ ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYS--------------SNCVLDIFQRLNIMIDVA 150
C+ +V EYM HG L + L S + L + Q L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 151 AALEYL---HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
A + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPIS 266
I +M PE + +T DV+SFG++L E FT K+P Y +SN
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-----------YQLSN----- 237
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
E +D RE C V+ + C +QR + K++ RL
Sbjct: 238 -TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 125/292 (42%), Gaps = 50/292 (17%)
Query: 51 IGRGSFGSVYKARI------QDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G+FG V+ A QD M VAVK + F E E++ ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYS--------------SNCVLDIFQRLNIMIDVA 150
C+ +V EYM HG L + L S + L + Q L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 151 AALEYL---HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
A + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPIS 266
I +M PE + +T DV+SFG++L E FT K+P Y +SN
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-----------YQLSN----- 243
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
E +D RE C V+ + C +QR + K++ RL
Sbjct: 244 -TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 291
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 44/288 (15%)
Query: 51 IGRGSFGSVYKARI------QDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G+FG V+ A QD + VAVK K F E E++ +++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVL----------DIFQRLNIMIDVAAA 152
C D +V EYM HG L K L + + VL Q L+I +AA
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
+ YL S +H DL N L+ +N++ + DFG+++ + D + T+ I +M
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 213 APEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVME-I 270
PE + +T DV+S G++L E FT K+P Y +SN V+E I
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW-----------YQLSN---NEVIECI 243
Query: 271 VDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+L R C V+ L + C R N K I T L
Sbjct: 244 TQGRVLQR-------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 125/292 (42%), Gaps = 50/292 (17%)
Query: 51 IGRGSFGSVYKARI------QDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G+FG V+ A QD M VAVK + F E E++ ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYS--------------SNCVLDIFQRLNIMIDVA 150
C+ +V EYM HG L + L S + L + Q L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 151 AALEYL---HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
A + YL HF +H DL N L+ +V + DFG+++ + D + +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPIS 266
I +M PE + +T DV+SFG++L E FT K+P Y +SN
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW-----------YQLSN----- 266
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
E +D RE C V+ + C +QR + K++ RL
Sbjct: 267 -TEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V+EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG G FG V+ + +VA+K + + F E EVM + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLK 170
LV E+M HG L L + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 171 PSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYS 230
N L+ +N V +SDFG+ + + +DQ S T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 231 FGIMLMETFTKKK 243
FG+++ E F++ K
Sbjct: 190 FGVLMWEVFSEGK 202
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 74 EEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 129
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 188
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 189 WSFGILLTELTTKGR 203
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKIISTC 108
IGRG+FG V+ R++ D VAVK K+ F E ++K H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V+E + G L + L + L ++ D AA +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ + V +SDFG+++ + S + + APE GR S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 229 YSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQ 288
+SFGI+L ETF+ + + T ++ + E
Sbjct: 299 WSFGILLWETFSLGASPYPNLSNQQTREF-------------------VEKGGRLPCPEL 339
Query: 289 CVSFVFNLAMECTVESAEQRINAKEIVTRLLKIR 322
C VF L +C QR + I L IR
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 105/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V+EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 84 EEPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK IRH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG G FG V+ + +VA+K + + F E EVM + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLK 170
LV E+M HG L L + + L + +DV + YL A VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 128
Query: 171 PSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYS 230
N L+ +N V +SDFG+ + + +DQ S T T + + +PE R S+ DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 231 FGIMLMETFTKKK 243
FG+++ E F++ K
Sbjct: 188 FGVLMWEVFSEGK 200
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 115/274 (41%), Gaps = 24/274 (8%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKIISTC 108
IGRG+FG V+ R++ D VAVK K+ F E ++K H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V+E + G L + L + L ++ D AA +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ + V +SDFG+++ + S + + APE GR S+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 229 YSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQ 288
+SFGI+L ETF+ + + T ++ + E
Sbjct: 299 WSFGILLWETFSLGASPYPNLSNQQTREF-------------------VEKGGRLPCPEL 339
Query: 289 CVSFVFNLAMECTVESAEQRINAKEIVTRLLKIR 322
C VF L +C QR + I L IR
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG G FG V+ + +VA+K + + F E EVM + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLK 170
LV E+M HG L L + + L + +DV + YL A VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 133
Query: 171 PSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYS 230
N L+ +N V +SDFG+ + + +DQ S T T + + +PE R S+ DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 231 FGIMLMETFTKKK 243
FG+++ E F++ K
Sbjct: 193 FGVLMWEVFSEGK 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG G FG V+ + +VA+K + + F E EVM + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLK 170
LV E+M HG L L + + L + +DV + YL A VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 130
Query: 171 PSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYS 230
N L+ +N V +SDFG+ + + +DQ S T T + + +PE R S+ DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 231 FGIMLMETFTKKK 243
FG+++ E F++ K
Sbjct: 190 FGVLMWEVFSEGK 202
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 132
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 191
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 192 WSFGILLTELTTKGR 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 251
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 249
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 250 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 73 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 128
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 187
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 188 WSFGILLTELTTKGR 202
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 250
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG G FG V+ + +VA+K + + F E EVM + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLK 170
LV E+M HG L L + + L + +DV + YL A VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLA 131
Query: 171 PSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYS 230
N L+ +N V +SDFG+ + + +DQ S T T + + +PE R S+ DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 231 FGIMLMETFTKKK 243
FG+++ E F++ K
Sbjct: 191 FGVLMWEVFSEGK 203
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 251
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 252 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 244
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 245 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 130
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 190 WSFGILLTELTTKGR 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDV 195
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 196 WSFGILLTELTTKGR 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 250 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 271
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 272 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 247
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKIISTCS 109
IG G FG V+ + +VA+K ++ G + + F E EVM + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKT--IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
LV E+M HG L L + + L + +DV + YL A VIH DL
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDL 149
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L+ +N V +SDFG+ + + +DQ S T T + + +PE R S+ DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 230 SFGIMLMETFTKKK 243
SFG+++ E F++ K
Sbjct: 209 SFGVLMWEVFSEGK 222
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 30/282 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + ++ +T A + +MA E +
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 270
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
+ E C ++ + ++C AE R + E+V+R+ I
Sbjct: 271 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 84 EEPI-YIVCEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 195
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 196 WSFGILLTELTTKGR 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 23/202 (11%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQ-------RLNIMIDVAAALEY-LHFGYS 161
+ +V+EYM S C+LD + RL ++D+AA + + +
Sbjct: 84 EEPI-YIVMEYM----------SKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
+H DL+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGR 191
Query: 222 VSTNGDVYSFGIMLMETFTKKK 243
+ DV+SFGI+L E TK +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 305
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 364
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 365 WSFGILLTELTTKGR 379
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 125/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAK-LLTGE-DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ +L E D ++T + +MA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 253
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 110 NDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L + L + Q +++ +A+ + Y+ +H D
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRD 388
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 447
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 448 WSFGILLTELTTKGR 462
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
++GRG+FG V KA+ + +VA+K ++ K+F VE + + H N++K+ C
Sbjct: 16 VVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM---IDVAAALEYLHFGYSAPVIH 166
N LV+EY GSL L+ + L + + M + + + YLH +IH
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 167 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
DLKP N+LL V + DFG T D T + +MAPE S
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 226 GDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSN 261
DV+S+GI+L E T++KP D+I + + V N
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN 220
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 139
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 198
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 199 WSFGILLTELTTKGR 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 15/216 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
++GRG+FG V KA+ + +VA+K ++ K+F VE + + H N++K+ C
Sbjct: 15 VVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM---IDVAAALEYLHFGYSAPVIH 166
N LV+EY GSL L+ + L + + M + + + YLH +IH
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 167 CDLKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
DLKP N+LL V + DFG T D T + +MAPE S
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 226 GDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSN 261
DV+S+GI+L E T++KP D+I + + V N
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN 219
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY-LHFGYSAPVIHCD 168
+ +V EYM GSL L + + RL ++D+AA + + + +H D
Sbjct: 251 EEPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 306
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ +N+V ++DFG+ +L+ + + Q I + APE GR + DV
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDV 365
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 366 WSFGILLTELTTKGR 380
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + + D ++T + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + + D ++T + +MA E +
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 250
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 251 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + + D ++T + +MA E +
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 252
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 253 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + + D ++T + +MA E +
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 257
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 258 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + + D ++T + +MA E +
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 253
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 254 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 124/287 (43%), Gaps = 30/287 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDG----MEVAVKVFH-LQCGGVFKSFDVECEVMKSIRHRNLI 102
N +IGRG FG VY + D + AVK + + G F E +MK H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 103 KIISTCSNDDFKALV-LEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ C + LV L YM HG L + + + + + VA +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE--DQSKSQTQTLATIGYMAPEYGRE 219
+H DL N +LD+ ++DFG+A+ + + D ++T + +MA E +
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
+ +T DV+SFG++L E T+ P P + D + +
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP-------------------PYPDVNTFDITVYLLQ 311
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ E C ++ + ++C AE R + E+V+R+ I + +
Sbjct: 312 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG+G FG V + G +VAVK ++ ++F E VM +RH NL++++
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 111 DDFKA-LVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L S VL L +DV A+EYL +H D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 127
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L NVL+ ++ VA +SDFG+ K + S +Q + + APE RE + ST DV
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 229 YSFGIMLMETFT 240
+SFGI+L E ++
Sbjct: 183 WSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG+G FG V + G +VAVK ++ ++F E VM +RH NL++++
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 111 DDFKA-LVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L S VL L +DV A+EYL +H D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 142
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L NVL+ ++ VA +SDFG+ K + S +Q + + APE RE + ST DV
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 229 YSFGIMLMETFT 240
+SFGI+L E ++
Sbjct: 198 WSFGILLWEIYS 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G+G FG V+ VA+K L+ G + ++F E +VMK +RH L+++ + S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQ-------RLNIMIDVAAALEY-LHFGYS 161
+ +V EYM S C+LD + RL ++D+AA + + +
Sbjct: 84 EEPI-YIVTEYM----------SKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 132
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
+H DL+ +N+L+ +N+V ++DFG+A+L+ + + Q I + APE GR
Sbjct: 133 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGR 191
Query: 222 VSTNGDVYSFGIMLMETFTKKK 243
+ DV+SFGI+L E TK +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG+G FG V + G +VAVK ++ ++F E VM +RH NL++++
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 111 DDFKA-LVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L S VL L +DV A+EYL +H D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 314
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L NVL+ ++ VA +SDFG+ K + S +Q + + APE RE + ST DV
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 229 YSFGIMLMETFT 240
+SFGI+L E ++
Sbjct: 370 WSFGILLWEIYS 381
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-KSFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V+ +VA+K L+ G + +SF E ++MK ++H L+++ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKT--LKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNC-VLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L L + +++ VAA + Y+ IH D
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRD 130
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L+ +N+L+ + ++ ++DFG+A+L+ + + Q I + APE GR + DV
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDV 189
Query: 229 YSFGIMLMETFTKKK 243
+SFGI+L E TK +
Sbjct: 190 WSFGILLTELVTKGR 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
IG+G FG V + G +VAVK ++ ++F E VM +RH NL++++
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 111 DDFKA-LVLEYMPHGSLEKCLYS-SNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYM GSL L S VL L +DV A+EYL +H D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRD 133
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L NVL+ ++ VA +SDFG+ K + S +Q + + APE RE ST DV
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 229 YSFGIMLMETFT 240
+SFGI+L E ++
Sbjct: 189 WSFGILLWEIYS 200
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 46 SENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRN 100
S + ++G G FG V R++ E++V + L+ G K F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FG 159
+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGR 218
Y +H DL N+L++ N+V +SDFG+A++L + ++ T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLS 277
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD----- 264
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 49 NLIGRGSFGSV--YKARIQDGMEVAVKVFHLQCGGV---FKSFDVECEVMKSIRHRNLIK 103
+IG G G V + R+ +V V + L+ G + F E +M H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FGYSA 162
+ + +V EYM +GSL+ L + + I Q + ++ V A + YL GY
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-- 172
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQSKSQTQTLATIGYMAPEYGREGR 221
+H DL NVL+D N+V +SDFG++++L + D + + T I + APE
Sbjct: 173 --VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 222 VSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSRE 279
S+ DV+SFG+++ E ++P YW ++N IS +E E
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERP------------YWNMTNRDVISSVE---------E 269
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
A C + L ++C + QR +IV+ L
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQ----CGGVFKSFDVECEVMKSIRHRNLIKII 105
+IG G FG VY+A G EVAVK ++ E ++ ++H N+I +
Sbjct: 14 IIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
C + LV+E+ G L + L DI +N + +A + YLH P+I
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPII 130
Query: 166 HCDLKPSNVLLDD--------NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
H DLK SN+L+ N + ++DFG+A+ E ++ +MAPE
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEVI 186
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKP 244
R S DV+S+G++L E T + P
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 34/279 (12%)
Query: 49 NLIGRGSFGSV--YKARIQDGMEVAVKVFHLQCGGV---FKSFDVECEVMKSIRHRNLIK 103
+IG G G V + R+ +V V + L+ G + F E +M H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FGYSA 162
+ + +V EYM +GSL+ L + + I Q + ++ V A + YL GY
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY-- 172
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQSKSQTQTLATIGYMAPEYGREGR 221
+H DL NVL+D N+V +SDFG++++L + D + + T I + APE
Sbjct: 173 --VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 222 VSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSRE 279
S+ DV+SFG+++ E ++P YW ++N IS +E E
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERP------------YWNMTNRDVISSVE---------E 269
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
A C + L ++C + QR +IV+ L
Sbjct: 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 39/243 (16%)
Query: 15 GKQLPNDANMPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQ-DG--MEVA 71
GK P D + PV W + ++IG G+FG V KARI+ DG M+ A
Sbjct: 10 GKNNP-DPTIYPVLDWNDIKF------------QDVIGEGNFGQVLKARIKKDGLRMDAA 56
Query: 72 VK-VFHLQCGGVFKSFDVECEVM-KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKC 129
+K + + F E EV+ K H N+I ++ C + + L +EY PHG+L
Sbjct: 57 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 116
Query: 130 LYSSNCV---------------LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNV 174
L S + L Q L+ DVA ++YL IH DL N+
Sbjct: 117 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNI 173
Query: 175 LLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 234
L+ +N VA ++DFG+++ G++ +T + +MA E +TN DV+S+G++
Sbjct: 174 LVGENYVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 230
Query: 235 LME 237
L E
Sbjct: 231 LWE 233
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 37/297 (12%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 35 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 94
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 95 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 154
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 155 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 218 REGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANL 275
+ ++ DV+S+GI+L E + ++P YW +SN V++ VD
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YWEMSNQ---DVIKAVD--- 252
Query: 276 LSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 253 ---EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 306
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 35/296 (11%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 45 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 104
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 164
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 165 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLL 276
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD---- 262
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 263 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 316
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 35/296 (11%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLL 276
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD---- 264
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 35/296 (11%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLL 276
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD---- 264
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 46 SENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRN 100
S + ++G G FG V R++ E++V + L+ G K F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FG 159
+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGR 218
Y +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLS 277
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD----- 264
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 35/296 (11%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLL 276
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD---- 264
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 141/297 (47%), Gaps = 37/297 (12%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 218 REGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANL 275
+ ++ DV+S+GI+L E + ++P YW +SN V++ VD
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YWEMSNQ---DVIKAVD--- 235
Query: 276 LSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 236 ---EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 289
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 46 SENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRN 100
S + ++G G FG V R++ E++V + L+ G K F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FG 159
+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGR 218
Y +H DL N+L++ N+V +SDFG+ ++L + ++ T+ I + +PE
Sbjct: 168 Y----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLS 277
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD----- 264
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L++S ++ + ++I A ++YLH + +IH D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L ++ + DFG+A + + S Q +I +MAPE R S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNI 216
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 101 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNI 240
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + + S Q +I +MAPE R + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 21 DANMPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQ-DG--MEVAVKVF-H 76
D + PV W + ++IG G+FG V KARI+ DG M+ A+K
Sbjct: 5 DPTIYPVLDWNDIKF------------QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 52
Query: 77 LQCGGVFKSFDVECEVM-KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC 135
+ F E EV+ K H N+I ++ C + + L +EY PHG+L L S
Sbjct: 53 YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 112
Query: 136 V---------------LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNM 180
+ L Q L+ DVA ++YL IH DL N+L+ +N
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 169
Query: 181 VAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
VA ++DFG+++ G++ +T + +MA E +TN DV+S+G++L E
Sbjct: 170 VAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 140/295 (47%), Gaps = 35/295 (11%)
Query: 46 SENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRN 100
S + ++G G FG V R++ E++V + L+ G K F E +M H N
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FG 159
+I++ + +V EYM +GSL+ L + + Q + ++ +A+ ++YL G
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGR 218
+ +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 168 F----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLS 277
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD----- 264
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 -EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L++S ++ + ++I A ++YLH + +IH D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L ++ + DFG+A + S Q +I +MAPE R S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +++E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 44/290 (15%)
Query: 51 IGRGSFGSVYKARI------QDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIK 103
+G FG VYK + + VA+K + G + F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY---------------SSNCVLDIFQRLNIMID 148
++ + D +++ Y HG L + L + L+ ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
+AA +EYL S V+H DL NVL+ D + +SD G+ + + D K +L
Sbjct: 137 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVM 268
I +MAPE G+ S + D++S+G++L E F+ L P
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------------------YGLQPYCGY 234
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
D + R + + C ++V+ L +EC E +R K+I +RL
Sbjct: 235 SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 44/290 (15%)
Query: 51 IGRGSFGSVYKARI------QDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIK 103
+G FG VYK + + VA+K + G + F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY---------------SSNCVLDIFQRLNIMID 148
++ + D +++ Y HG L + L + L+ ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
+AA +EYL S V+H DL NVL+ D + +SD G+ + + D K +L
Sbjct: 154 IAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVM 268
I +MAPE G+ S + D++S+G++L E F+ L P
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-------------------YGLQPYCGY 251
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
D + R + + C ++V+ L +EC E +R K+I +RL
Sbjct: 252 SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 94 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNI 232
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L++S ++ + ++I A ++YLH + +IH D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L ++ + DFG+A + S Q +I +MAPE R S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNC-VLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +V EYMP+G+L L N + L + +++A+EYL IH D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRD 155
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N V ++DFG+++L+TG D + I + APE S DV
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG+VYK + +VAVK+ ++ ++F E V++ RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ A+V ++ SL L+ ++ + ++I A ++YLH + +IH D
Sbjct: 102 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR---EGRVSTN 225
LK +N+ L +++ + DFG+A + S Q +I +MAPE R + S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 226 GDVYSFGIMLMETFTKKKPTDKI 248
DVY+FGI+L E T + P I
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 28/275 (10%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VAVK+ ++ G + + F E + M + H L+K CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM--IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
+ +V EY+ +G L L S L+ Q L + DV + +L S IH DL
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDL 130
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L+D ++ +SDFG+ + + +DQ S T + + APE + S+ DV+
Sbjct: 131 AARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVW 189
Query: 230 SFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQ 288
+FGI++ E F+ K P D E+ LK + + L R H A+
Sbjct: 190 AFGILMWEVFSLGKMPYDLYTNSEVVLK-------------VSQGHRLYR--PHLASDT- 233
Query: 289 CVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
++ + C E E+R +++++ + +R+
Sbjct: 234 ----IYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 99/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +++E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +++E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 38/237 (16%)
Query: 21 DANMPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQ-DG--MEVAVKVF-H 76
D + PV W + ++IG G+FG V KARI+ DG M+ A+K
Sbjct: 12 DPTIYPVLDWNDIKF------------QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE 59
Query: 77 LQCGGVFKSFDVECEVM-KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC 135
+ F E EV+ K H N+I ++ C + + L +EY PHG+L L S
Sbjct: 60 YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 119
Query: 136 V---------------LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNM 180
+ L Q L+ DVA ++YL IH +L N+L+ +N
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARNILVGENY 176
Query: 181 VAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
VA ++DFG+++ G++ +T + +MA E +TN DV+S+G++L E
Sbjct: 177 VAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 230
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 37/297 (12%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 18 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 77
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V E M +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 78 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 137
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 138 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 218 REGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANL 275
+ ++ DV+S+GI+L E + ++P YW +SN V++ VD
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERP------------YWEMSNQ---DVIKAVD--- 235
Query: 276 LSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 236 ---EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 289
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 139/296 (46%), Gaps = 35/296 (11%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-F 158
N+I++ + +V E M +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
GY +H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 167 GY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLL 276
+ ++ DV+S+GI+L E + GE YW +SN V++ VD
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS---------YGER--PYWEMSNQ---DVIKAVD---- 264
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ A +VAVK V ++F E VMK+++H L+K+ + +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ E+M GSL L S Q L +ID +A + E + F IH DL
Sbjct: 82 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ ++V ++DFG+A+++ + + + I + APE G + DV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVW 196
Query: 230 SFGIMLMETFT 240
SFGI+LME T
Sbjct: 197 SFGILLMEIVT 207
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +++E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +++E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 129/280 (46%), Gaps = 32/280 (11%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V R++ E+ V + L+ G K F E +M H N+I +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH-FGYSAP 163
+ +V EYM +GSL+ L ++ + Q + ++ ++A ++YL GY
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY--- 145
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGREGRV 222
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE +
Sbjct: 146 -VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 223 STNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSREDK 281
++ DV+S+GI++ E + GE YW ++N I +E E
Sbjct: 205 TSASDVWSYGIVMWEVVS---------YGERP--YWEMTNQDVIKAVE---------EGY 244
Query: 282 HFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
+ C + ++ L ++C + R EIV L K+
Sbjct: 245 RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 149
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 209 WAFGVLLWEIAT 220
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 140
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 200 WAFGVLLWEIAT 211
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 137/297 (46%), Gaps = 39/297 (13%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGV---FKSFDVECEVMKSIRHRNLIKI 104
+IG G FG V + R++ E V + L+ G + F E +M H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL-HFGYSAP 163
+N ++ E+M +G+L+ L ++ + Q + ++ +A+ + YL Y
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY--- 139
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA---TIGYMAPEYGREG 220
+H DL N+L++ N+V +SDFG+++ L ++T +L I + APE
Sbjct: 140 -VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSR 278
+ ++ D +S+GI++ E + ++P YW +SN I+ +E
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERP------------YWDMSNQDVINAIE--------- 237
Query: 279 EDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLK-IRD--SLLICTRES 332
+D C + + L ++C + R ++V+ L K IR+ SL I RE+
Sbjct: 238 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVAREN 294
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 137
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRD 138
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 136
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 195
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 196 SFGILLTEIVTHGR 209
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 137
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 196
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 197 SFGILLTEIVTHGR 210
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 141
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 26/259 (10%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ A +VAVK V ++F E VMK+++H L+K+ + +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ E+M GSL L S Q L +ID +A + E + F IH DL
Sbjct: 255 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ ++V ++DFG+A+++ + + + I + APE G + DV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGSFTIKSDVW 369
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
SFGI+LME T + +P M + E C
Sbjct: 370 SFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPRPENC 410
Query: 290 VSFVFNLAMECTVESAEQR 308
++N+ M C E+R
Sbjct: 411 PEELYNIMMRCWKNRPEER 429
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 203
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 204 SFGILLTEIVTHGR 217
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 136
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 200
Query: 230 SFGIMLMETFT 240
SFGI+L E T
Sbjct: 201 SFGILLTEIVT 211
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N + L + +++A+EYL IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRD 134
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 143
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 202
Query: 230 SFGIMLMETFT 240
SFGI+L E T
Sbjct: 203 SFGILLTEIVT 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 41/293 (13%)
Query: 51 IGRGSFGSVY-----KARIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKI 104
+G G FG V G VAVK CG +S + E ++++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 105 ISTCSNDDFKAL--VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C + K+L V+EY+P GSL Y + + Q L + + YLH S
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---SQ 136
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREGR 221
IH +L NVLLD++ + + DFG+AK + G + + + + + + APE +E +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 222 VSTNGDVYSFGIMLMETFTK----KKPTDK------IFAGEMTLKYWVSNLLPISVMEIV 271
DV+SFG+ L E T + P K I G+MT+ + + E++
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV---------LRLTELL 247
Query: 272 D-ANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
+ L R DK C V++L C A R + ++ L + +
Sbjct: 248 ERGERLPRPDK-------CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 200
Query: 230 SFGIMLMETFT 240
SFGI+L E T
Sbjct: 201 SFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 199
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 200 SFGILLTEIVTHGR 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 130
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 189
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 190 SFGILLTEIVTHGR 203
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 138/296 (46%), Gaps = 35/296 (11%)
Query: 45 FSENNLIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHR 99
S + ++G G FG V R++ E++V + L+ G K F E +M H
Sbjct: 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHP 106
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N+I++ + +V E M +GSL+ L + + Q + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS-- 164
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGR 218
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + +PE
Sbjct: 165 -DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 219 EGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLL 276
+ ++ DV+S+GI+L E + ++P YW +SN V++ VD
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERP------------YWEMSNQ---DVIKAVD---- 264
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVT---RLLKIRDSLLICT 329
E C + ++ L ++C + R ++IV+ +L++ SL I T
Sbjct: 265 --EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIIT 318
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + +D+ S + + + PE + S+ D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 249
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
V+ + C E A++R K +++ +L + D
Sbjct: 250 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 132/281 (46%), Gaps = 34/281 (12%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V R++ +VAV + L+ G K F E +M H N++ +
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL-HFGYSAP 163
+ +V+E+M +G+L+ L + + Q + ++ +AA + YL GY
Sbjct: 110 EGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY--- 166
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS-KSQTQTLATIGYMAPEYGREGRV 222
+H DL N+L++ N+V +SDFG+++++ + ++ + T + + APE + +
Sbjct: 167 -VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
Query: 223 STNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSRED 280
++ DV+S+GI++ E + ++P YW +SN I +E E
Sbjct: 226 TSASDVWSYGIVMWEVMSYGERP------------YWDMSNQDVIKAIE---------EG 264
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
A C + + L ++C + +R ++IV L K+
Sbjct: 265 YRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 128/277 (46%), Gaps = 26/277 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + +D+ S + + + PE + S+ D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 234
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
V+ + C E A++R K +++ +L + D L
Sbjct: 235 ---VYTIMYSCWHEKADERPTFKILLSNILDVMDENL 268
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 145
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 204
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 205 SFGILLTEIVTHGR 218
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 131
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + ++ + S+ + + PE + S+ D++
Sbjct: 132 AARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFP-VRWSPPEVLMYSKFSSKSDIW 190
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 234
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
V+ + C E A++R K +++ +L + D
Sbjct: 235 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 265
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 130
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + +D+ S + + + PE + S+ D++
Sbjct: 131 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 233
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
V+ + C E A++R K +++ +L + D
Sbjct: 234 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 264
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 137
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + +D+ S + + + PE + S+ D++
Sbjct: 138 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 197 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 240
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
V+ + C E A++R K +++ +L + D
Sbjct: 241 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 271
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 32/281 (11%)
Query: 50 LIGRGSFGSVYKA--RIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V ++ E+ V + L+ G K F E +M H N+I +
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ ++ E+M +GSL+ L ++ + Q + ++ +AA ++YL
Sbjct: 100 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNY 156
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA---TIGYMAPEYGREGR 221
+H DL N+L++ N+V +SDFG+++ L + + T L I + APE + +
Sbjct: 157 VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 216
Query: 222 VSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSRED 280
++ DV+S+GI++ E + GE YW ++N I+ +E +D
Sbjct: 217 FTSASDVWSYGIVMWEVMS---------YGER--PYWDMTNQDVINAIE---------QD 256
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
C S + L ++C + R +IV L K+
Sbjct: 257 YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 126
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + +D+ S + + + PE + S+ D++
Sbjct: 127 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 229
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
V+ + C E A++R K +++ +L + D
Sbjct: 230 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 127/274 (46%), Gaps = 26/274 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIKIISTCS 109
+G G FG V + + +VA+K+ ++ G + + F E +VM ++ H L+++ C+
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM--IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ EYM +G L L Q L + DV A+EYL S +H DL
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDL 146
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
N L++D V +SDFG+++ + +D+ S + + + PE + S+ D++
Sbjct: 147 AARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
+FG+++ E ++ K + F T ++ I L R H A+++
Sbjct: 206 AFGVLMWEIYSLGKMPYERFTNSETAEH------------IAQGLRLYR--PHLASEK-- 249
Query: 290 VSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
V+ + C E A++R K +++ +L + D
Sbjct: 250 ---VYTIMYSCWHEKADERPTFKILLSNILDVMD 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 135/296 (45%), Gaps = 39/296 (13%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGV---FKSFDVECEVMKSIRHRNLIKI 104
+IG G FG V + R++ E V + L+ G + F E +M H N+I++
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL-HFGYSAP 163
+N ++ E+M +G+L+ L ++ + Q + ++ +A+ + YL Y
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY--- 137
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA---TIGYMAPEYGREG 220
+H DL N+L++ N+V +SDFG+++ L + T +L I + APE
Sbjct: 138 -VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSR 278
+ ++ D +S+GI++ E + ++P YW +SN I+ +E
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERP------------YWDMSNQDVINAIE--------- 235
Query: 279 EDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLK-IRD--SLLICTRE 331
+D C + + L ++C + R ++V+ L K IR+ SL I RE
Sbjct: 236 QDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKIVARE 291
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 40/283 (14%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHL-------QCGGVFKSFDVECEVMKSIRHRNLI 102
IG+G FG V+K R ++D VA+K L + F+ F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K+ N +V+E++P G L L + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 163 PVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY- 216
P++H DL+ N+ LD+N + A ++DFG T + S + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWMAPETI 198
Query: 217 -GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANL 275
E + D YSF ++L T + P D+ G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------------INM 241
Query: 276 LSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ E E C + N+ C ++R + IV L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 41/293 (13%)
Query: 51 IGRGSFGSVY-----KARIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKI 104
+G G FG V G VAVK CG +S + E ++++++ H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 105 ISTCSNDDFKAL--VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C + K+L V+EY+P GSL Y + + Q L + + YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQ 136
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREGR 221
IH +L NVLLD++ + + DFG+AK + G + + + + + + APE +E +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 222 VSTNGDVYSFGIMLMETFTK----KKPTDK------IFAGEMTLKYWVSNLLPISVMEIV 271
DV+SFG+ L E T + P K I G+MT+ + + E++
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV---------LRLTELL 247
Query: 272 D-ANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
+ L R DK C V++L C A R + ++ L + +
Sbjct: 248 ERGERLPRPDK-------CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHE 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHL-------QCGGVFKSFDVECEVMKSIRHRNLI 102
IG+G FG V+K R ++D VA+K L + F+ F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K+ N +V+E++P G L L + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 163 PVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY- 216
P++H DL+ N+ LD+N + A ++DFG++ + S + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHSVSGLLGNFQWMAPETI 198
Query: 217 -GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANL 275
E + D YSF ++L T + P D+ G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------------INM 241
Query: 276 LSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ E E C + N+ C ++R + IV L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 340
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 400 WAFGVLLWEIAT 411
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 120/274 (43%), Gaps = 17/274 (6%)
Query: 51 IGRGSFGSVYKARIQD-----GMEVAVKVFHLQCGGV-FKSFDVECEVMKSIRHRNLIKI 104
+G G FG V R G +VAVK + GG E E+++++ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 105 ISTCSNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C+ D L++E++P GSL++ L + +++ Q+L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 133
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TGEDQSKSQTQTLATIGYMAPEYGREGR 221
+H DL NVL++ + DFG+ K + T ++ + + + + APE + +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 222 VSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDK 281
DV+SFG+ L E T A + LK ++V +V+ +E K
Sbjct: 194 FYIASDVWSFGVTLHELLTYCDSDSSPMA--LFLKMIGPTHGQMTVTRLVNT---LKEGK 248
Query: 282 HFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
C V+ L +C R + + ++
Sbjct: 249 RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNL 131
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 190
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 191 SFGILLTEIVTHGR 204
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 51 IGRGSFGSVYKARIQD-----GMEVAVKVFHLQCGGV-FKSFDVECEVMKSIRHRNLIKI 104
+G G FG V R G +VAVK + GG E E+++++ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 105 ISTCSNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C+ D L++E++P GSL++ L + +++ Q+L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SR 145
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TGEDQSKSQTQTLATIGYMAPEYGREGR 221
+H DL NVL++ + DFG+ K + T ++ + + + + APE + +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 222 VSTNGDVYSFGIMLMETFT 240
DV+SFG+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 205
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E S + D+++ G ++ +
Sbjct: 206 LTEKSASKSSDLWALGCIIYQ 226
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N ++ L + +++A+EYL IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRN 382
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 442 WAFGVLLWEIAT 453
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G +G VY+ + + VAVK V + F E VMK I+H NL++++ C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSN-CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ ++ E+M +G+L L N + L + +++A+EYL IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRN 343
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDV 228
L N L+ +N + ++DFG+++L+TG D + I + APE + S DV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 229 YSFGIMLMETFT 240
++FG++L E T
Sbjct: 403 WAFGVLLWEIAT 414
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ + +VAVK V ++F E +MK+++H L+++ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
++ ++ EYM GSL L S + +L ID +A + E + + IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHRDL 136
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +NVL+ ++++ ++DFG+A+++ + + + I + APE G + DV+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSDVW 195
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T K
Sbjct: 196 SFGILLYEIVTYGK 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 121/291 (41%), Gaps = 57/291 (19%)
Query: 45 FSENNL-----IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFKS-FDVECEV 92
+ NN+ IG G+FG V++AR + VAVK+ + ++ F E +
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 93 MKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSN----C------------- 135
M + N++K++ C+ L+ EYM +G L + L S + C
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 136 ------VLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 189
L ++L I VAA + YL +H DL N L+ +NMV ++DFG+
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGL 220
Query: 190 AKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIF 249
++ + D K+ I +M PE R +T DV+++G++L E F+
Sbjct: 221 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
Query: 250 AGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMEC 300
A E + Y + D N+L A E C ++NL C
Sbjct: 281 AHEEVIYY------------VRDGNIL-------ACPENCPLELYNLMRLC 312
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 51 IGRGSFGSVY-----KARIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKI 104
+G G FG V G VAVK CG +S + E E+++++ H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 105 ISTCSNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C + K+ LV+EY+P GSL L +CV + Q L + + YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQ 130
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREGR 221
IH L NVLLD++ + + DFG+AK + G + + + + + + APE +E +
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 222 VSTNGDVYSFGIMLMETFT 240
DV+SFG+ L E T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 51 IGRGSFGSVYKARIQD---GMEVAVKVFHL---QCGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G +VY A +D ++VA+K + + K F+ E + H+N++ +
Sbjct: 19 LGGGGMSTVYLA--EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
I DD LV+EY+ +L + + S+ L + +N + +++ H +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRI 132
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT-QTLATIGYMAPEYGREGRVS 223
+H D+KP N+L+D N + DFGIAK L+ + S +QT L T+ Y +PE +
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATD 190
Query: 224 TNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNL 262
D+YS GI+L E + P F GE + + ++
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKHI 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 14/199 (7%)
Query: 51 IGRGSFGSVY-----KARIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKI 104
+G G FG V G VAVK CG +S + E E+++++ H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 105 ISTCSNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C + K+ LV+EY+P GSL L +CV + Q L + + YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCV-GLAQLLLFAQQICEGMAYLH---AQ 131
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREGR 221
IH L NVLLD++ + + DFG+AK + G + + + + + + APE +E +
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 222 VSTNGDVYSFGIMLMETFT 240
DV+SFG+ L E T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 64
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 123
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 124 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 181 LTEKSACKSSDLWALGCIIYQ 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 125 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 182 LTEKSACKSSDLWALGCIIYQ 202
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 67
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 126
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 127 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 184 LTEKSACKSSDLWALGCIIYQ 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 66
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 125
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 126 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 183 LTEKSACKSSDLWALGCIIYQ 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVF-----KSFDVECEVMKSIRHRNLIKI 104
+G G FG V + QD G +VA+K QC + + +E ++MK + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 105 ------ISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYL 156
+ + +D L +EY G L K L + + C L ++ D+++AL YL
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 137
Query: 157 HFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H +IH DLKP N++L ++ + D G AK L DQ + T+ + T+ Y+A
Sbjct: 138 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 191
Query: 214 PEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
PE + + + D +SFG + E T +P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVF-----KSFDVECEVMKSIRHRNLIKI 104
+G G FG V + QD G +VA+K QC + + +E ++MK + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIK----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 105 ------ISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYL 156
+ + +D L +EY G L K L + + C L ++ D+++AL YL
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL 138
Query: 157 HFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H +IH DLKP N++L ++ + D G AK L DQ + T+ + T+ Y+A
Sbjct: 139 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLA 192
Query: 214 PEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
PE + + + D +SFG + E T +P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 202
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 203 LTEKSACKSSDLWALGCIIYQ 223
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G + K L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 183 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 71
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 130
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 131 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 188 LTEKSACKSSDLWALGCIIYQ 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 86
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 145
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 146 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 202
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 203 LTEKSACKSSDLWALGCIIYQ 223
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 54/320 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKIRDSLLICTRESKLN 335
L +I L + T E L+
Sbjct: 311 EDLDRI---LTLTTNEEYLD 327
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G G V+ +VAVK Q +F E +MK ++H+ L+++ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ EYM +GSL L + + I +N ++D+AA + E + F IH DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ D + ++DFG+A+L+ + + + I + APE G + DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T +
Sbjct: 195 SFGILLTEIVTHGR 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G GS+GSVYKA + G VA+K ++ + E +M+ +++K +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
+ +V+EY GS+ + N L + I+ LEYLHF IH D+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDI 151
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K N+LL+ A L+DFG+A LT D + + T +MAPE +E + D++
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GI +E K P +++ P+ + ++ N F E
Sbjct: 210 SLGITAIEMAEGKPP--------------YADIHPMRAIFMIPTN----PPPTFRKPELW 251
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
+ +C V+S EQR A +++
Sbjct: 252 SDNFTDFVKQCLVKSPEQRATATQLL 277
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 33/307 (10%)
Query: 26 PVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKA-RIQDG----MEVAVKVFHLQCG 80
P T + L + + T+ ++G G+FG+VYK + +G + VA+K+ + G
Sbjct: 22 PSGTAPNQAQLRILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG 80
Query: 81 GVFK-SFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDI 139
F E +M S+ H +L++++ C + + LV + MPHG L + ++ +
Sbjct: 81 PKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS 139
Query: 140 FQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 199
LN + +A + YL ++H DL NVL+ ++DFG+A+LL G+++
Sbjct: 140 QLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE 196
Query: 200 KSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW 258
+ I +MA E + + DV+S+G+ + E T KP D I E+
Sbjct: 197 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI----- 251
Query: 259 VSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+LL + ++ C V+ + ++C + A+ R KE+
Sbjct: 252 --------------PDLLEKGER-LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 296
Query: 319 LKI-RDS 324
++ RD
Sbjct: 297 SRMARDP 303
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 54/320 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKIRDSLLICTRESKLN 335
L +I L + T E L+
Sbjct: 311 EDLDRI---LTLTTNEEYLD 327
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 206 LTEKSAXKSSDLWALGCIIYQ 226
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T+ T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPEL 203
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPEL 206
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 207 LTEKSACKSSDLWALGCIIYQ 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 90
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 149
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 150 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 206
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 207 LTEKSACKSSDLWALGCIIYQ 227
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 40/283 (14%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHL-------QCGGVFKSFDVECEVMKSIRHRNLI 102
IG+G FG V+K R ++D VA+K L + F+ F E +M ++ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K+ N +V+E++P G L L + +L +M+D+A +EY+ +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNP 143
Query: 163 PVIHCDLKPSNVL---LDDN--MVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY- 216
P++H DL+ N+ LD+N + A ++DF ++ + S + L +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHSVSGLLGNFQWMAPETI 198
Query: 217 -GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANL 275
E + D YSF ++L T + P D+ G++ N+
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF-----------------INM 241
Query: 276 LSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ E E C + N+ C ++R + IV L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 149 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 205
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 206 LTEKSACKSSDLWALGCIIYQ 226
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 125/282 (44%), Gaps = 34/282 (12%)
Query: 50 LIGRGSFGSVYKA--RIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V ++ E+ V + L+ G K F E +M H N+I +
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 73
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ ++ E+M +GSL+ L ++ + Q + ++ +AA ++YL
Sbjct: 74 EGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNY 130
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA---TIGYMAPEYGREGR 221
+H L N+L++ N+V +SDFG+++ L + + T L I + APE + +
Sbjct: 131 VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK 190
Query: 222 VSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSRE 279
++ DV+S+GI++ E + ++P YW ++N I+ +E +
Sbjct: 191 FTSASDVWSYGIVMWEVMSYGERP------------YWDMTNQDVINAIE---------Q 229
Query: 280 DKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
D C S + L ++C + R +IV L K+
Sbjct: 230 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 129/283 (45%), Gaps = 32/283 (11%)
Query: 50 LIGRGSFGSVYKA-RIQDG----MEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
++G G+FG+VYK + +G + VA+K+ + G F E +M S+ H +L++
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
++ C + + LV + MPHG L + ++ + LN + +A + YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ERR 137
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVS 223
++H DL NVL+ ++DFG+A+LL G+++ + I +MA E + +
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 224 TNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKH 282
DV+S+G+ + E T KP D I E+ +LL + ++
Sbjct: 198 HQSDVWSYGVTIWELMTFGGKPYDGIPTREI-------------------PDLLEKGER- 237
Query: 283 FAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
C V+ + ++C + A+ R KE+ ++ RD
Sbjct: 238 LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 280
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 123
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 176
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 177 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 41/293 (13%)
Query: 51 IGRGSFGSVY-----KARIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLIKI 104
+G G FG V G VAVK G +S + E ++++++ H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 105 ISTCSNDDFKAL--VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
C + +L V+EY+P GSL Y + + Q L + + YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQ 153
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREGR 221
IH DL NVLLD++ + + DFG+AK + G + + + + + + APE +E +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 222 VSTNGDVYSFGIMLMETFTK----KKPTDK------IFAGEMTLKYWVSNLLPISVMEIV 271
DV+SFG+ L E T + P K I G+MT+ + + E++
Sbjct: 214 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV---------LRLTELL 264
Query: 272 D-ANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
+ L R DK C + V++L C A R + ++ L + +
Sbjct: 265 ERGERLPRPDK-------CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 92
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 151
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 152 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 208
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 209 LTEKSACKSSDLWALGCIIYQ 229
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 128
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 182 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 33/304 (10%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDG----MEVAVKVFHLQCG-GVFKSFDVECE 91
+F+ T+ + ++G G FG+V+K I +G + V +KV + G F++
Sbjct: 9 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 67
Query: 92 VMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
+ S+ H ++++++ C + LV +Y+P GSL + L LN + +A
Sbjct: 68 AIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 126
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
+ YL ++H +L NVLL ++DFG+A LL +D+ ++ I +
Sbjct: 127 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
MA E G+ + DV+S+G+ + E T F E P + + +
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT--------FGAE-----------PYAGLRLA 224
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV---TRLLKIRDSLLIC 328
+ L + + A + C V+ + ++C + R KE+ TR+ + L+
Sbjct: 225 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVI 284
Query: 329 TRES 332
RES
Sbjct: 285 KRES 288
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 178
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 179 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 121
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 174
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 175 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G + K L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPPEM 182
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 183 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 33/304 (10%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDG----MEVAVKVFHLQCG-GVFKSFDVECE 91
+F+ T+ + ++G G FG+V+K I +G + V +KV + G F++
Sbjct: 27 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHML 85
Query: 92 VMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
+ S+ H ++++++ C + LV +Y+P GSL + L LN + +A
Sbjct: 86 AIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAK 144
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
+ YL ++H +L NVLL ++DFG+A LL +D+ ++ I +
Sbjct: 145 GMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
MA E G+ + DV+S+G+ + E T F E P + + +
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT--------FGAE-----------PYAGLRLA 242
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV---TRLLKIRDSLLIC 328
+ L + + A + C V+ + ++C + R KE+ TR+ + L+
Sbjct: 243 EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYLVI 302
Query: 329 TRES 332
RES
Sbjct: 303 KRES 306
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 182
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 183 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPPEM 182
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 183 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K+ T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKI 321
L +I
Sbjct: 311 EDLDRI 316
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG+G+ G+VY A + G EVA++ +LQ + E VM+ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K N+LL + L+DFG +T E QSK +++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-QSK-RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 230 SFGIMLMETFTKKKP 244
S GIM +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPEM 178
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 179 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ A +VAVK V ++F E VMK+++H L+K+ + +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV-EAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
+ ++ E+M GSL L S Q L +ID +A + E + F IH DL
Sbjct: 249 EPI-YIITEFMAKGSLLDFLKSDEGSK---QPLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +N+L+ ++V ++DFG+A++ I + APE G + DV+
Sbjct: 305 RAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
SFGI+LME T + +P M + E C
Sbjct: 354 SFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPRPENC 394
Query: 290 VSFVFNLAMECTVESAEQR 308
++N+ M C E+R
Sbjct: 395 PEELYNIMMRCWKNRPEER 413
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 141
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 194
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 195 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF + AR + E A+K+ L+ + K V E +VM +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 87
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ T +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 146
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 147 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 203
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 204 LTEKSACKSSDLWALGCIIYQ 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG+G+ G+VY A + G EVA++ +LQ + E VM+ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K N+LL + L+DFG +T E QSK T + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 230 SFGIMLMETFTKKKP 244
S GIM +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKI 321
L +I
Sbjct: 311 EDLDRI 316
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 42 TDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG---GVFKSFDVECEVMKSIR 97
+D + ++G G V+ AR ++D +VAVKV + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 98 HRNLIKIISTCSND----DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
H ++ + T + +V+EY+ +L +++ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEV-IADAC 126
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG--- 210
+ L+F + +IH D+KP+N+++ + DFGIA+ + D S TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y++PE R V DVYS G +L E T + P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 41/229 (17%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVF-------------K 84
+F+ +D ++G+G FG A+KV H + G V +
Sbjct: 6 IFRPSD-LIHGEVLGKGCFGQ------------AIKVTHRETGEVMVMKELIRFDEETQR 52
Query: 85 SFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN 144
+F E +VM+ + H N++K I D + EY+ G+L + S + QR++
Sbjct: 53 TFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS 112
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
D+A+ + YLH S +IH DL N L+ +N ++DFG+A+L+ E +
Sbjct: 113 FAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR 169
Query: 205 TL---------ATIG---YMAPEYGREGRVSTNGDVYSFGIMLMETFTK 241
+L +G +MAPE DV+SFGI+L E +
Sbjct: 170 SLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 203
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 204 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 40 QATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQC---GGVFKSFDVECEVMKS 95
+ + F NL+G+GSF VY+A I G+EVA+K+ + G+ + E ++
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
++H +++++ + + ++ LVLE +G + + L + + + M + + Y
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAP 214
LH S ++H DL SN+LL NM ++DFG+A L + TL T Y++P
Sbjct: 128 LH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL---KMPHEKHYTLCGTPNYISP 181
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTD 246
E DV+S G M + P D
Sbjct: 182 EIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 42 TDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG---GVFKSFDVECEVMKSIR 97
+D + ++G G V+ AR ++D +VAVKV + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 98 HRNLIKIISTCSND----DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
H ++ + T + +V+EY+ +L +++ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEV-IADAC 126
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG--- 210
+ L+F + +IH D+KP+N+++ + DFGIA+ + D S TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y++PE R V DVYS G +L E T + P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEX 182
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR D++S G++ E K P
Sbjct: 183 -IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 14/207 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRH 98
+ F +G+G FG+VY AR Q +A+KV L+ GV E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + L+LEY P G++ + L D + + ++A AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCH- 129
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S VIH D+KP N+LL N ++DFG + S +T T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM-I 182
Query: 219 EGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E P
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKI 321
L +I
Sbjct: 311 EDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 131/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKI 321
L +I
Sbjct: 311 EDLDRI 316
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 130/304 (42%), Gaps = 39/304 (12%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKS--IRHRNLIKIIS- 106
LIGRG +G+VYK + D VAVKVF ++F E + + + H N+ + I
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSF---ANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 107 ----TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF---- 158
T LV+EY P+GSL K Y S D + V L YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 159 --GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE------DQSKSQTQTLATIG 210
Y + H DL NVL+ ++ +SDFG++ LTG ++ + + TI
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 211 YMAPEYGREGRVSTNG--------DVYSFGIMLMETF---TKKKPTDKIFAGEMTLKYWV 259
YMAPE EG V+ D+Y+ G++ E F T P + + +M + V
Sbjct: 194 YMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252
Query: 260 SNLLPISVMEIVDANLLSREDKHFAAKEQ--CVSFVFNLAMECTVESAEQRINAKEIVTR 317
N M+++ + R A KE V + +C + AE R+ A+ R
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312
Query: 318 LLKI 321
+ ++
Sbjct: 313 MAEL 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 47/304 (15%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGV-FKSFDVECEVM 93
D + +G G+FG V K + ++ + VAVK+ E E+M
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 94 KSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD--- 138
K I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 139 IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 197
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ + D
Sbjct: 155 TFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 198 QSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS----- 258
Query: 258 WVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTR 317
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 ------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 312
Query: 318 LLKI 321
L +I
Sbjct: 313 LDRI 316
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG+G+ G+VY A + G EVA++ +LQ + E VM+ ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K N+LL + L+DFG +T E QSK ++ + T +MAPE D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-QSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 230 SFGIMLMETFTKKKP 244
S GIM +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG+G+ G+VY A + G EVA++ +LQ + E VM+ ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+EY+ GSL + + C +D Q + + ALE+LH S VIH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K N+LL + L+DFG +T E QSK ++ + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE-QSK-RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 230 SFGIMLMETFTKKKP 244
S GIM +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQDGMEV-AVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR ++ + A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G FG V K + ++ + VAVK+ L+ K E E
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 79
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 80 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 139
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 140 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINN 196
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 197 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 245
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 246 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297
Query: 316 TRLLKI 321
L +I
Sbjct: 298 EDLDRI 303
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G FG V K + ++ + VAVK+ L+ K E E
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 138
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 255
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 256 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 304
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 305 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356
Query: 316 TRLLKI 321
L +I
Sbjct: 357 EDLDRI 362
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 6/194 (3%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+G G FG V+ + +VAVK V ++F E +MK+++H L+++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL-EYLHFGYSAPVIHCDL 169
++ ++ E+M GSL L S + +L ID +A + E + + IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHRDL 135
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
+ +NVL+ ++++ ++DFG+A+++ + + + I + APE G + +V+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP-IKWTAPEAINFGCFTIKSNVW 194
Query: 230 SFGIMLMETFTKKK 243
SFGI+L E T K
Sbjct: 195 SFGILLYEIVTYGK 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL +++FG + S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM 180
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 181 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G FG V K + ++ + VAVK+ L+ K E E
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 84
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 85 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 144
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 145 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 201
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 202 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 250
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 251 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
Query: 316 TRLLKI 321
L +I
Sbjct: 303 EDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G FG V K + ++ + VAVK+ L+ K E E
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 81
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++EY G+L + L Y N V +
Sbjct: 82 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 141
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 142 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 198
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 199 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 247
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 248 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
Query: 316 TRLLKI 321
L +I
Sbjct: 300 EDLDRI 305
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 12/201 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSI 96
+ F ++G GSF +V AR + E A+K+ L+ + K V E +VM +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKI--LEKRHIIKENKVPYVTRERDVMSRL 94
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H +K+ +D+ L Y +G L K + + R ++ +ALEYL
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYL 153
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +IH DLKP N+LL+++M ++DFG AK+L+ E + + T Y++PE
Sbjct: 154 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 210
Query: 217 GREGRVSTNGDVYSFGIMLME 237
E + D+++ G ++ +
Sbjct: 211 LTEKSACKSSDLWALGCIIYQ 231
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 30/279 (10%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V R++ E+ V + L+ G K F E +M H N+I +
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 95
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ ++ EYM +GSL+ L ++ + Q + ++ + + ++YL
Sbjct: 96 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSA 152
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGREGRVS 223
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE + +
Sbjct: 153 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 212
Query: 224 TNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSREDKH 282
+ DV+S+GI++ E + GE YW +SN I +E E
Sbjct: 213 SASDVWSYGIVMWEVMS---------YGERP--YWDMSNQDVIKAIE---------EGYR 252
Query: 283 FAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
C + L ++C + R +IV L K+
Sbjct: 253 LPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 42 TDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG---GVFKSFDVECEVMKSIR 97
+D + ++G G V+ AR ++D +VAVKV + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 98 HRNLIKIISTCSND----DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
H ++ + T + +V+EY+ +L +++ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEV-IADAC 126
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG--- 210
+ L+F + +IH D+KP+N+L+ + DFGIA+ + D S QT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA--DSGNSVXQTAAVIGTAQ 184
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y++PE R V DVYS G +L E T + P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL +++FG + S +T T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPPEM 179
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 180 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 16/210 (7%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPE 215
H S VIH D+KP N+LL ++DFG + S+ TL T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRDTLCGTLDYLPPE 177
Query: 216 YGREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 178 MI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPPEM 179
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 180 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V R++ E+ V + L+ G K F E +M H N+I +
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 80
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ ++ EYM +GSL+ L ++ + Q + ++ + + ++YL
Sbjct: 81 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSY 137
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGREGRVS 223
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE + +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
Query: 224 TNGDVYSFGIMLMETFT 240
+ DV+S+GI++ E +
Sbjct: 198 SASDVWSYGIVMWEVMS 214
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG+G+ G+VY A + G EVA++ +LQ + E VM+ ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+EY+ GSL + + C +D Q + + ALE+LH S VIH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K N+LL + L+DFG +T E QSK T + T +MAPE D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 230 SFGIMLMETFTKKKP 244
S GIM +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 30/279 (10%)
Query: 50 LIGRGSFGSVYKARIQ--DGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIKI 104
+IG G FG V R++ E+ V + L+ G K F E +M H N+I +
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHL 74
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ ++ EYM +GSL+ L ++ + Q + ++ + + ++YL
Sbjct: 75 EGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSY 131
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYGREGRVS 223
+H DL N+L++ N+V +SDFG++++L + ++ T+ I + APE + +
Sbjct: 132 VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
Query: 224 TNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW-VSNLLPISVMEIVDANLLSREDKH 282
+ DV+S+GI++ E + GE YW +SN I +E E
Sbjct: 192 SASDVWSYGIVMWEVMS---------YGERP--YWDMSNQDVIKAIE---------EGYR 231
Query: 283 FAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
C + L ++C + R +IV L K+
Sbjct: 232 LPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPPEM 180
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEM 180
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 181 -IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHL-----QCGGVFKSFDVECEVMKSIRH 98
+ + + +G G F +VYKAR ++ + VA+K L G+ ++ E ++++ + H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N+I ++ + +LV ++M LE + ++ VL M+ LEYLH
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
+ ++H DLKP+N+LLD+N V L+DFG+AK + ++ + T Y APE
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--RAYXHQVVTRWYRAPELLF 185
Query: 219 EGRVSTNG-DVYSFGIMLME 237
R+ G D+++ G +L E
Sbjct: 186 GARMYGVGVDMWAVGCILAE 205
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 110/240 (45%), Gaps = 28/240 (11%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGG---VFKSFDVECEVMK 94
FQ+ + + L+G GS+G V K R +D G VA+K F L+ V K E +++K
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKF-LESDDDKMVKKIAMREIKLLK 79
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKC-LYSSNCVLDIFQRLNIMIDVAAAL 153
+RH NL+ ++ C LV E++ H L+ L+ + + Q+ I +
Sbjct: 80 QLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI-----I 134
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+ F +S +IH D+KP N+L+ + V L DFG A+ L + +AT Y A
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA--PGEVYDDEVATRWYRA 192
Query: 214 PE-------YGREGRVSTNGDVYSFGIMLMETFTKKK--PTDKIFAGEMTLKYWVSNLLP 264
PE YG+ DV++ G ++ E F + P D + + NL+P
Sbjct: 193 PELLVGDVKYGKA------VDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L YS N + ++L+
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 143 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 240
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 241 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 16/208 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRH 98
+ F +G+G FG+VY AR Q +A+KV L+ GV E E+ +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + L+LEY P G++ + L D + + ++A AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCH- 129
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S VIH D+KP N+LL N ++DFG + S+ TL T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSV-----HAPSSRRDTLCGTLDYLPPEM- 181
Query: 218 REGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
A + F +G+G FG+VY AR Q +A+KV L+ GV E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
RH N++++ + L+LEY P G++ + L D + + ++A AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H S VIH D+KP N+LL ++DFG + S + T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPPEM 203
Query: 217 GREGRVSTNG-DVYSFGIMLMETFTKKKP 244
EGR+ D++S G++ E K P
Sbjct: 204 I-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L YS N + ++L+
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 146 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 243
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 244 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 251
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 252 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L YS N + ++L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 154 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 251
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 252 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L YS N + ++L+
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 147 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 244
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 245 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L YS N + ++L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 154 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 251
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 252 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L YS N + ++L+
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 195 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 292
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 293 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++ Y G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKI 321
L +I
Sbjct: 311 EDLDRI 316
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 37 ELFQATDG---FSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHL---QCGGVFKSFDVE 89
ELF D FS+ IG GSFG+VY AR +++ VA+K Q ++ E
Sbjct: 6 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 65
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++ +RH N I+ + LV+EY CL S++ +L++ ++ +++
Sbjct: 66 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEI 117
Query: 150 AA----ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
AA AL+ L + +S +IH D+K N+LL + + L DFG A ++
Sbjct: 118 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXF 171
Query: 206 LATIGYMAPEY---GREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T +MAPE EG+ DV+S GI +E +K P
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 130/306 (42%), Gaps = 51/306 (16%)
Query: 43 DGFSENNLIGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECE 91
D + +G G+FG V K + ++ + VAVK+ L+ K E E
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATEKDLSDLVSEME 92
Query: 92 VMKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----------YSSNCVLD- 138
+MK I +H+N+I ++ C+ D +++ Y G+L + L Y N V +
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 139 --IFQRL-NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
F+ L + +A +EYL S IH DL NVL+ +N V ++DFG+A+ +
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN 209
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
D K T + +MAPE + + DV+SFG+++ E FT G
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGS--- 258
Query: 256 KYWVSNLLPISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
P + + + L +E C + ++ + +C QR K++V
Sbjct: 259 --------PYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
Query: 316 TRLLKI 321
L +I
Sbjct: 311 EDLDRI 316
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 28/222 (12%)
Query: 37 ELFQATDG---FSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHL---QCGGVFKSFDVE 89
ELF D FS+ IG GSFG+VY AR +++ VA+K Q ++ E
Sbjct: 45 ELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKE 104
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++ +RH N I+ + LV+EY CL S++ +L++ ++ +++
Sbjct: 105 VRFLQKLRHPNTIQYRGCYLREHTAWLVMEY--------CLGSASDLLEVHKKPLQEVEI 156
Query: 150 AA----ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
AA AL+ L + +S +IH D+K N+LL + + L DFG A ++
Sbjct: 157 AAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------PANXF 210
Query: 206 LATIGYMAPEY---GREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T +MAPE EG+ DV+S GI +E +K P
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 41/282 (14%)
Query: 45 FSENNLIGRGSFGSVYKARI--QDGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRH 98
F+ ++G+G FGSV +A++ +DG V V V L+ + S F E MK H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 99 RNLIKIISTCSNDDFKA------LVLEYMPHGSLEKCLYSSNCVLDIFQR-----LNIMI 147
++ K++ K ++L +M HG L L +S + F + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 148 DVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
D+A +EYL S IH DL N +L ++M ++DFG+++ + D + +
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTK-KKPTDKIFAGEMTLKYWVSNLLPIS 266
+ ++A E + + + DV++FG+ + E T+ + P I E + N L
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL--- 252
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ N L + +C+ V++L +C +QR
Sbjct: 253 ----IGGNRLKQ-------PPECMEEVYDLMYQCWSADPKQR 283
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 27/236 (11%)
Query: 25 PPVATWRRFSYLEL---FQATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVK---VFHL 77
PPV ++ L + F IGRG F VY+A + DG+ VA+K +F L
Sbjct: 11 PPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL 70
Query: 78 QCGGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL---------EK 128
E +++K + H N+IK ++ D+ +VLE G L +K
Sbjct: 71 MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQK 130
Query: 129 CLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 188
L V F + + +ALE++H S V+H D+KP+NV + V L D G
Sbjct: 131 RLIPERTVWKYF------VQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 189 IAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ + + ++ + + T YM+PE E + D++S G +L E + P
Sbjct: 182 LGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 175 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 279
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 280 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 316
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 16 KQLPNDANMPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDG-MEVAVKV 74
K + N + P + T R F+ D F +G+G FG+VY AR + VA+KV
Sbjct: 4 KVMENSSGTPDILT-RHFT-------IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKV 55
Query: 75 F---HLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLY 131
++ GV E E+ + H N++++ + + L+LEY P G L K L
Sbjct: 56 LFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ 115
Query: 132 SSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 191
S C D + IM ++A AL Y H VIH D+KP N+LL ++DFG
Sbjct: 116 KS-CTFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFG--- 168
Query: 192 LLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKP 244
+ S + T+ Y+ PE EGR+ D++ G++ E P
Sbjct: 169 -WSVHAPSLRRKTMCGTLDYLPPEMI-EGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 143 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 247
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 248 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 250
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 251 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 42 TDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG---GVFKSFDVECEVMKSIR 97
+D + ++G G V+ AR ++ +VAVKV + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 98 HRNLIKIISTCSND----DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
H ++ + +T + +V+EY+ +L +++ + + I + +A A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEV-IADAC 126
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG--- 210
+ L+F + +IH D+KP+N+++ + DFGIA+ + D S TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y++PE R V DVYS G +L E T + P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L +S N + ++L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 251
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 252 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 140 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 244
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 245 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 257
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 258 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 177
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 153 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 257
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 258 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 146 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 250
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 251 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 147 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 251
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 252 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 288
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 16/210 (7%)
Query: 45 FSENN---LIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRN 100
+ EN ++G+G++G VY R + + + +A+K + + E + K ++H+N
Sbjct: 7 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN 66
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVL-DIFQRLNIMI-DVAAALEYLHF 158
+++ + + S + F + +E +P GSL L S L D Q + + L+YLH
Sbjct: 67 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH- 125
Query: 159 GYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEY 216
++H D+K NVL++ + V +SDFG +K L G + T+T T+ YMAPE
Sbjct: 126 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEI 180
Query: 217 GREGR--VSTNGDVYSFGIMLMETFTKKKP 244
+G D++S G ++E T K P
Sbjct: 181 IDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 16/210 (7%)
Query: 45 FSENN---LIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRN 100
+ EN ++G+G++G VY R + + + +A+K + + E + K ++H+N
Sbjct: 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN 80
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVL-DIFQRLNIMI-DVAAALEYLHF 158
+++ + + S + F + +E +P GSL L S L D Q + + L+YLH
Sbjct: 81 IVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH- 139
Query: 159 GYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEY 216
++H D+K NVL++ + V +SDFG +K L G + T+T T+ YMAPE
Sbjct: 140 --DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC---TETFTGTLQYMAPEI 194
Query: 217 GREGR--VSTNGDVYSFGIMLMETFTKKKP 244
+G D++S G ++E T K P
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 126/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 144 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 248
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C +F L C + + R + EI++ +
Sbjct: 249 LLDKPD-------NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 285
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 45 FSENNL-----IGRGSFGSVYKAR---IQDGMEVAVKVFHLQCGGV--FKSFDVECEVMK 94
F E +L +G+G+FGSV R + D V V LQ G + F E +++K
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 95 SIRHRNLIKI--ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
++ ++K +S LV+EY+P G L L LD + L +
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGY 211
+EYL S +H DL N+L++ ++DFG+AKLL +D + + I +
Sbjct: 124 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFW 180
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFT 240
APE + S DV+SFG++L E FT
Sbjct: 181 YAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 184
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 214
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 177
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 42 TDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG---GVFKSFDVECEVMKSIR 97
+D + ++G G V+ AR ++ +VAVKV + F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 98 HRNLIKIISTCSND----DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
H ++ + T + +V+EY+ +L +++ + + I + +A A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEV-IADAC 126
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG--- 210
+ L+F + +IH D+KP+N+++ + DFGIA+ + D S TQT A IG
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 184
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y++PE R V DVYS G +L E T + P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 42 TDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG---GVFKSFDVECEVMKSIR 97
+D + ++G G V+ AR ++ +VAVKV + F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 98 HRNLIKIISTCSND----DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
H ++ + T + +V+EY+ +L +++ + + I + +A A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEV-IADAC 143
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG--- 210
+ L+F + +IH D+KP+N+++ + DFGIA+ + D S TQT A IG
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQ 201
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y++PE R V DVYS G +L E T + P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 121/290 (41%), Gaps = 36/290 (12%)
Query: 48 NNLIGRGSFGSVYKA--------RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHR 99
+ +IG+G FG VY RIQ ++ ++ +Q ++F E +M+ + H
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQ---QVEAFLREGLLMRGLNHP 82
Query: 100 NLIKIIST-CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++ +I + ++L YM HG L + + S + ++ + VA +EYL
Sbjct: 83 NVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL-- 140
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA--TIGYMAPEY 216
+H DL N +LD++ ++DFG+A+ + + Q A + + A E
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 217 GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLL 276
+ R +T DV+SFG++L E T+ P P ++ D
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAP-------------------PYRHIDPFDLTHF 240
Query: 277 SREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDSLL 326
+ + E C ++ + +C R + +V + +I +LL
Sbjct: 241 LAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 177
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 176
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 176
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEIL 176
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 177
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 181
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L Y N + ++L+
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 139 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 236
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 237 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 125/284 (44%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ ++ + DFG+ + + D + + L + +M+P
Sbjct: 138 YLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 242
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C + L C + + R + EI++ +
Sbjct: 243 LLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 126/298 (42%), Gaps = 51/298 (17%)
Query: 51 IGRGSFGSVY--------KARIQDGMEVAVKVFHLQCGGVFKSFD---VECEVMKSI-RH 98
+G G+FG V K + +VAVK+ L+ K E E+MK I +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQRLN----- 144
+N+I ++ C+ D +++EY G+L + L Y N + ++L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
VA +EYL S IH DL NVL+ ++ V ++DFG+A+ + D K T
Sbjct: 154 SCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 204 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLL 263
+ +MAPE + + DV+SFG++L E FT G
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGS----------- 251
Query: 264 PISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
P + + + L +E C + ++ + +C QR K++V L +I
Sbjct: 252 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 184
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 45 FSENNL-----IGRGSFGSVYKAR---IQDGMEVAVKVFHLQCGGV--FKSFDVECEVMK 94
F E +L +G+G+FGSV R + D V V LQ G + F E +++K
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 95 SIRHRNLIKI--ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
++ ++K +S LV+EY+P G L L LD + L +
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGY 211
+EYL S +H DL N+L++ ++DFG+AKLL +D + + I +
Sbjct: 127 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 183
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFT 240
APE + S DV+SFG++L E FT
Sbjct: 184 YAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 45 FSENNL-----IGRGSFGSVYKAR---IQDGMEVAVKVFHLQCGGV--FKSFDVECEVMK 94
F E +L +G+G+FGSV R + D V V LQ G + F E +++K
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 95 SIRHRNLIKI--ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
++ ++K +S LV+EY+P G L L LD + L +
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGY 211
+EYL S +H DL N+L++ ++DFG+AKLL +D + + I +
Sbjct: 140 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 196
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFT 240
APE + S DV+SFG++L E FT
Sbjct: 197 YAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIISTC 108
+G G++G VYKA+ G VA+K L G+ + E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
++ LV E+M L+K L + L Q I I + L + + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE--YGREGRVSTNG 226
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP+ G + + ST+
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSK-KYSTSV 201
Query: 227 DVYSFGIMLMETFTKK 242
D++S G + E T K
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 129/296 (43%), Gaps = 30/296 (10%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQC-GGVFKSFDVECEVMKSIRHRNLIKIISTC 108
IG G F V A I G VA+K+ G E E +K++RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ +VLEY P G L + S + + + R+ + + +A+ Y+H S H D
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRD 133
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR-EGRVSTNGD 227
LKP N+L D+ L DFG+ G QT ++ Y APE + + + + D
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEAD 192
Query: 228 VYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWV--SNLLPISVMEIVDA--- 273
V+S GI+L P D KI G+ + W+ S++L + M VD
Sbjct: 193 VWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKR 252
Query: 274 ----NLLSR----EDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
NLL+ +D ++ + Q + +L +C E + N ++ + L+ +
Sbjct: 253 ISMKNLLNHPWIMQDYNYPVEWQSKNPFIHLDDDCVTELSVHHRNNRQTMEDLISL 308
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 16/209 (7%)
Query: 45 FSENNL-----IGRGSFGSVYKAR---IQDGMEVAVKVFHLQCGGV--FKSFDVECEVMK 94
F E +L +G+G+FGSV R + D V V LQ G + F E +++K
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 95 SIRHRNLIKI--ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
++ ++K +S LV+EY+P G L L LD + L +
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGY 211
+EYL S +H DL N+L++ ++DFG+AKLL +D + + I +
Sbjct: 128 MEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW 184
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFT 240
APE + S DV+SFG++L E FT
Sbjct: 185 YAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIISTC 108
+G G++G VYKA+ G VA+K L G+ + E ++K + H N++ +I
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
++ LV E+M L+K L + L Q I I + L + + ++H D
Sbjct: 89 HSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLLRGVAHCHQHRILHRD 144
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE--YGREGRVSTNG 226
LKP N+L++ + L+DFG+A+ +S T + T+ Y AP+ G + + ST+
Sbjct: 145 LKPQNLLINSDGALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSK-KYSTSV 201
Query: 227 DVYSFGIMLMETFTKK 242
D++S G + E T K
Sbjct: 202 DIWSIGCIFAEMITGK 217
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 32/281 (11%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS-----SNCVLDIFQRLNIMIDVAAAL-EYLH 157
++ S +V+E M HG L+ L S N L MI +AA + + +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
+ + +H DL N ++ + + DFG+ + + D + + L + +MAPE
Sbjct: 142 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 201
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLS 277
++G +T+ D++SFG++L E + + + + E LK+ ++D L
Sbjct: 202 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGGYLD 249
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ D C V +L C + + R EIV L
Sbjct: 250 QPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 122/281 (43%), Gaps = 32/281 (11%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS-----SNCVLDIFQRLNIMIDVAAAL-EYLH 157
++ S +V+E M HG L+ L S N L MI +AA + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
+ + +H DL N ++ + + DFG+ + + D + + L + +MAPE
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLS 277
++G +T+ D++SFG++L E + + + + E LK+ ++D L
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGGYLD 252
Query: 278 REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ D C V +L C + + R EIV L
Sbjct: 253 QPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS-----SNCVLDIFQRLNIMIDVAAAL-EYLH 157
++ S +V+E M HG L+ L S N L MI +AA + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
+ + +H DL N ++ + + DFG+ + + D + + L + +MAPE
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
++G +T+ D++SFG++L E + + + + E LK+
Sbjct: 205 KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 53 RGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKS--IRHRNLIKIIST--- 107
RG FG V+KA++ + VAVK+F LQ +S+ E E+ + ++H NL++ I+
Sbjct: 25 RGRFGCVWKAQLMNDF-VAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 108 CSNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF-------- 158
SN + + L+ + GSL Y ++ + ++ ++ L YLH
Sbjct: 81 GSNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIGYMAPEYG 217
G+ + H D K NVLL ++ A L+DFG+A + G+ + Q + T YMAPE
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAPEV- 196
Query: 218 REGRVSTNG------DVYSFGIMLMETFTKKK----PTDKI---FAGEMTLKYWVSNLLP 264
EG ++ D+Y+ G++L E ++ K P D+ F E+ + L
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQE 256
Query: 265 ISVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDS 324
+ V + + + KH + CV+ EC AE R++A + R+ IR S
Sbjct: 257 VVVHKKMRPTIKDHWLKHPGLAQLCVTI-----EECWDHDAEARLSAGCVEERVSLIRRS 311
Query: 325 L 325
+
Sbjct: 312 V 312
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 48 NNLIGRGSFGSVYKA----RIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLI 102
N ++G G FG VY+ + + VAVK C K F E +MK++ H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K+I + +++E P+G L L + L + + + + A+ YL S
Sbjct: 89 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 144
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
+H D+ N+L+ L DFG+++ + ED K+ L I +M+PE R
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 203
Query: 223 STNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDK 281
+T DV+ F + + E + K+P +W+ N I V+E D
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPF-----------FWLENKDVIGVLEKGD--------- 243
Query: 282 HFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ C ++ L C R E+V L
Sbjct: 244 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 280
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 48 NNLIGRGSFGSVYKA----RIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLI 102
N ++G G FG VY+ + + VAVK C K F E +MK++ H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K+I + +++E P+G L L + L + + + + A+ YL S
Sbjct: 73 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 128
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
+H D+ N+L+ L DFG+++ + ED K+ L I +M+PE R
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 187
Query: 223 STNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDK 281
+T DV+ F + + E + K+P +W+ N I V+E D
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPF-----------FWLENKDVIGVLEKGD--------- 227
Query: 282 HFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ C ++ L C R E+V L
Sbjct: 228 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 264
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 48 NNLIGRGSFGSVYKA----RIQDGMEVAVKVFHLQCGGVFKS-FDVECEVMKSIRHRNLI 102
N ++G G FG VY+ + + VAVK C K F E +MK++ H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K+I + +++E P+G L L + L + + + + A+ YL S
Sbjct: 77 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SI 132
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
+H D+ N+L+ L DFG+++ + ED K+ L I +M+PE R
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRF 191
Query: 223 STNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDK 281
+T DV+ F + + E + K+P +W+ N I V+E D
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPF-----------FWLENKDVIGVLEKGD--------- 231
Query: 282 HFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ C ++ L C R E+V L
Sbjct: 232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSL 268
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 175
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 175
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG 176
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L K ++ + I L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDL-KTFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 176
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+ L + GV + E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 177
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+ L + GV + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ T + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLG 176
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 119
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 177
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 119
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 177
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 120
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 178
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 119
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 177
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 175
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 176
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG 176
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 206
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 117
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 175
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS---------SNCVLDIFQRLNIMIDVAAALE 154
++ S +V+E M HG L+ L S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ + + DFG+ + + D + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T+ D++SFG++L E + + + + E LK+ ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
L + D C V +L C + + R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 233
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 234 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 281
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 10 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 68
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 69 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 127
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 128 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 233
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 234 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 281
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 118
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 176
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 121
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 179
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 211
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 33/299 (11%)
Query: 34 SYLELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQ-----CGGVFKSFD 87
+ L + + T+ F + ++G G+FG+VYK I +G +V + V ++ K
Sbjct: 41 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEIL 99
Query: 88 VECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI 147
E VM S+ + ++ +++ C + L+ + MP G L + + LN +
Sbjct: 100 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 148 DVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
+A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 159 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 215
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPIS 266
I +MA E + DV+S+G+ + E T KP D I A E++ S
Sbjct: 216 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------S 264
Query: 267 VMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
++E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 265 ILE---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 314
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L+K + +S L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 120
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 178
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 128/297 (43%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 236
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 237 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 13/214 (6%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIRHR 99
+ F + IG G++G VYKAR + G VA+K L + GV + E ++K + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
N++K++ ++ LV E++ H L+K + +S L I + L+ L F
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG 178
Query: 220 GR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS---------SNCVLDIFQRLNIMIDVAAALE 154
++ S +V+E M HG L+ L S + + + + ++A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ + + DFG+ + + D + + L + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T+ D++SFG++L E + + + + E LK+ ++D
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 248
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
L + D C V +L C + + R EIV L
Sbjct: 249 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKS---FDVECEVMKSIRHRNLIK 103
+G+GSFG VY K ++D E V + + + F E VMK ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS------SNCVL---DIFQRLNIMIDVAAALE 154
++ S +++E M G L+ L S +N VL + + + + ++A +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N + ++ + DFG+ + + D + + L + +M+P
Sbjct: 140 YLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T DV+SFG++L E T + + + E L++ +++
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGG 244
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
LL + D C + L C + + R + EI++ +
Sbjct: 245 LLDKPD-------NCPDMLLELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 159 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 259
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 260 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 17/216 (7%)
Query: 57 GSVYKARIQDGMEVAVKVFHLQCGGVFKS--FDVECEVMKSIRHRNLIKIISTCSND--D 112
G ++K R Q G ++ VKV ++ KS F+ EC ++ H N++ ++ C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 113 FKALVLEYMPHGSLEKCLY-SSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKP 171
L+ +MP+GSL L+ +N V+D Q + +D+A + +LH H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNS 141
Query: 172 SNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN---GDV 228
+V++D++M A +S + S + ++APE ++ TN D+
Sbjct: 142 RSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 229 YSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLP 264
+SF ++L E T++ P + E+ +K + L P
Sbjct: 195 WSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 173 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 273
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 274 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G+FG VYKA+ ++ G A KV + + + VE E++ + H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
+D +++E+ P G+++ + + L Q I + LE L+F +S +IH DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 170 KPSNVLLDDNMVAHLSDFGI-AKLLTGEDQSKSQTQTLATIGYMAPEY-----GREGRVS 223
K NVL+ L+DFG+ AK L + S + T +MAPE ++
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIGTPYWMAPEVVMCETMKDTPYD 200
Query: 224 TNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
D++S GI L+E + P ++ + LK
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G+FG VYKA+ ++ G A KV + + + VE E++ + H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
+D +++E+ P G+++ + + L Q I + LE L+F +S +IH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 170 KPSNVLLDDNMVAHLSDFGI-AKLLTGEDQSKSQTQTLATIGYMAPEY-----GREGRVS 223
K NVL+ L+DFG+ AK L + S + T +MAPE ++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS---FIGTPYWMAPEVVMCETMKDTPYD 192
Query: 224 TNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
D++S GI L+E + P ++ + LK
Sbjct: 193 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRH 98
D F +G+G FG+VY AR Q+ +A+KV L+ GV E E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
VIH D+KP N+L+ ++DFG + S + T+ Y+ PE
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTD 246
D++ G++ E P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L K ++ + I L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDL-KTFMDASALTGIPLPL-IKSYLFQLLQGLA 120
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 178
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRH 98
D F +G+G FG+VY AR Q+ +A+KV L+ GV E E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 132
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
VIH D+KP N+L+ ++DFG + S + T+ Y+ PE
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTD 246
D++ G++ E P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 129
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 135
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 136 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 159 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 259
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 260 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 165 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 265
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 266 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 145
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 91 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 145
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 185 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 285
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 286 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 158 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 258
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 259 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 150 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 250
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 251 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 39 FQATDG---FSENNLIGRGSFGSVYKA---RIQDGMEVAVKVFHLQCGGVFKSF-DVECE 91
FQ+ D F++ IG+GSFG V+K R Q VA+K+ L+ E
Sbjct: 20 FQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEIT 77
Query: 92 VMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
V+ + K + D +++EY+ GS L LD Q I+ ++
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILK 135
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
L+YLH S IH D+K +NVLL ++ L+DFG+A LT D + + T +
Sbjct: 136 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFW 190
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
MAPE ++ + D++S GI +E + P
Sbjct: 191 MAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 71 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 125
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 128/300 (42%), Gaps = 33/300 (11%)
Query: 33 FSYLELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSF 86
+ L + + T+ F + ++G G+FG+VYK I +G +V + V K
Sbjct: 3 MALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEI 61
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
E VM S+ + ++ +++ C + L+ + MP G L + + LN
Sbjct: 62 LDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWC 120
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
+ +A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 121 VQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 177
Query: 207 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPI 265
I +MA E + DV+S+G+ + E T KP D I A E++
Sbjct: 178 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS----------- 226
Query: 266 SVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
S++E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 227 SILE---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 277
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 112/253 (44%), Gaps = 12/253 (4%)
Query: 34 SYLELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFD 87
+ L + + T+ F + ++G G+FG+VYK I +G +V + V K
Sbjct: 7 ALLRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEIL 65
Query: 88 VECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI 147
E VM S+ + ++ +++ C + L+ + MP G L + + LN +
Sbjct: 66 DEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 148 DVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
+A + YL ++H DL NVL+ ++DFG+AKLL E++
Sbjct: 125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPIS 266
I +MA E + DV+S+G+ + E T KP D I A E++ LP
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 241
Query: 267 VMEIVDANLLSRE 279
+ +D ++ R+
Sbjct: 242 PICTIDVYMIMRK 254
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 235
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 236 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 283
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 3 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 61
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 62 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 121 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 226
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 227 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 274
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 240 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 89 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 143
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 12 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 70
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 71 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 129
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 130 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ LP +
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 246
Query: 269 EIVDANLLSRE 279
+D ++ R+
Sbjct: 247 CTIDVYMIMRK 257
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 175 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 275
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 276 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 69 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 123
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 124 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 34 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 92
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 93 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 151
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 152 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 257
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 258 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 305
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 75 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 129
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 130 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 19/210 (9%)
Query: 48 NNLIGRGSFGSVYKARI--QDG--MEVAVKVFHLQCGGV--FKSFDVECEVMKSIRHRNL 101
++G G FGSV + + +DG ++VAVK L + F E MK H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 102 IKIISTCSNDDFKAL-----VLEYMPHGSLEKCLYSSNCV-----LDIFQRLNIMIDVAA 151
I+++ C + + +L +M +G L L S + + L M+D+A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
+EYL + +H DL N +L D+M ++DFG++K + D + + +
Sbjct: 159 GMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTK 241
+A E + ++ DV++FG+ + E T+
Sbjct: 216 IAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 15 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 73
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 74 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 132
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 133 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 238
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 239 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 286
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 19 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 77
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 78 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 136
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 137 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ LP +
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 253
Query: 269 EIVDANLLSRE 279
+D ++ R+
Sbjct: 254 CTIDVYMIMRK 264
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 159 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 259
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 260 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 199 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 299
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 300 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + ++LE M G L+ L S L + L++ D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 176 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 276
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 277 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS---------SNCVLDIFQRLNIMIDVAAALE 154
++ S +V+E M HG L+ L S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H +L N ++ + + DFG+ + + D + + L + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
E ++G +T+ D++SFG++L E + + + + E LK+
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 13 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 71
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 72 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 130
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 131 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 236
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 237 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 284
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 23/219 (10%)
Query: 45 FSENNL-----IGRGSFGSVYKARI-----QDG-MEVAVKVFHLQCGGVFK-SFDVECEV 92
F NNL +G G+FG V +A +D ++VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 93 MKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
M + +H N++ ++ C++ ++ EY +G L L + VL+ I A+
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 152 ALEYLHFG----------YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKS 201
+ LHF S IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS---------SNCVLDIFQRLNIMIDVAAALE 154
++ S +V+E M HG L+ L S + + + + ++A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H +L N ++ + + DFG+ + + D + + L + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T+ D++SFG++L E + + + + E LK+ ++D
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 250
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
L + D C V +L C + R EIV L
Sbjct: 251 YLDQPD-------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ H L K ++ + I L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDL-KDFMDASALTGIPLPL-IKSYLFQLLQGLA 117
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 175
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 234
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 235 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 282
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 45 FSENNLIGRGSFGSVYKA---RIQDGMEVAVKVFHLQCGGVFKSF-DVECEVMKSIRHRN 100
F++ IG+GSFG V+K R Q VA+K+ L+ E V+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+ K + D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
S IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
+ D++S GI +E + P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 24/219 (10%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVF-HLQCGGVFKSFDV-ECEVMKSIRHRNLIKIIST 107
IG GS+G V+K R +D G VA+K F + V K + E ++K ++H NL+ ++
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQR---LNIMIDVA-AALEYLHFGYSAP 163
LV EY H L + LD +QR +++ + L+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE-------Y 216
IH D+KP N+L+ + V L DFG A+LLTG S +AT Y +PE Y
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 217 GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
G V G V++ + + + K D+++ TL
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTL 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + +++E M G L+ L S L + L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 158 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 258
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 259 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G G+FG VY+ ++ ++VAVK C + F +E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAALEYL- 156
I + +++E M G L+ L S L + L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 157 --HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
HF IH D+ N LL VA + DFG+A+ + + + + +
Sbjct: 173 ENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
M PE EG ++ D +SFG++L E F+ G M + V+E V
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EVLEFV 273
Query: 272 DANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+ R D + C V+ + +C E R N I+ R+
Sbjct: 274 TSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ LP +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 269 EIVDANLLSRE 279
+D ++ R+
Sbjct: 246 CTIDVYMIMRK 256
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 45 FSENNLIGRGSFGSVYKA---RIQDGMEVAVKVFHLQCGGVFKSF-DVECEVMKSIRHRN 100
F++ IG+GSFG V+K R Q VA+K+ L+ E V+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+ K + D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
S IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE ++
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
+ D++S GI +E + P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRH 98
D F +G+G FG+VY AR Q+ +A+KV L+ GV E E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + + L+LE+ P G L K L + D + M ++A AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL-QKHGRFDEQRSATFMEELADALHYCH- 131
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
VIH D+KP N+L+ ++DFG + S + T+ Y+ PE
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTD 246
D++ G++ E P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 45 FSENNLI-----GRGSFGSVYKA-----RIQDG-MEVAVKVFHLQCG-GVFKSFDVECEV 92
F NL+ G G FG V KA + + G VAVK+ + E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 93 MKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCV---------------- 136
+K + H ++IK+ CS D L++EY +GSL L S V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 137 -------LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 189
L + ++ ++ ++YL ++H DL N+L+ + +SDFG+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 190 AKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
++ + ED ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 48 NNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGG--VFKSFDVECEVMKSIRHRNLIKII 105
LIG+G FG VY R EVA+++ ++ K+F E + RH N++ +
Sbjct: 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM 95
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
C + A++ +L + + VLD+ + I ++ + YLH + ++
Sbjct: 96 GACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGI----AKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
H DLK NV D+ V ++DFG+ L G + K + Q + ++APE R+
Sbjct: 153 HKDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQN-GWLCHLAPEIIRQLS 210
Query: 222 VST---------NGDVYSFGIMLMETFTKKKP 244
T + DV++ G + E ++ P
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 45 FSENNLI-----GRGSFGSVYKA-----RIQDG-MEVAVKVFHLQCG-GVFKSFDVECEV 92
F NL+ G G FG V KA + + G VAVK+ + E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 93 MKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCV---------------- 136
+K + H ++IK+ CS D L++EY +GSL L S V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 137 -------LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 189
L + ++ ++ ++YL ++H DL N+L+ + +SDFG+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 190 AKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
++ + ED ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 197 SRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 45 FSENNLIGRGSFGSVYKA---RIQDGMEVAVKVFHLQCGGVFKSF-DVECEVMKSIRHRN 100
F++ IG+GSFG V+K R Q VA+K+ L+ E V+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQK--VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+ K + D +++EY+ GS L LD Q I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 136
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
S IH D+K +NVLL ++ L+DFG+A LT D + + T +MAPE ++
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
+ D++S GI +E + P
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP 218
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ S++ + L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 178
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 34/270 (12%)
Query: 48 NNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV------ECEVMKSIRHRN 100
+ +G G+FG V Q G +VAVK+ + Q +S DV E + +K RH +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+IK+ S +V+EY+ G L + V ++ R + + +A++Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH--- 128
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
V+H DLKP NVLLD +M A ++DFG++ +++ + ++ + + Y APE G
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT---SCGSPNYAAPEV-ISG 184
Query: 221 RVSTNG--DVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVSNLLPISVME 269
R+ D++S G++L P D KI G + +++ + +M
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 244
Query: 270 IVDANLLSRED-----KHFAAKEQCVSFVF 294
++ + L R +H K+ S++F
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQDLPSYLF 274
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ S++ + L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGV--PVRTYXHEVVTLWYRAPEIL 176
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ G FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 39 FQAT--DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGV-FKSFDVECEVMK 94
FQ T D F +G G+FG V+ + G+E +K + V + + E EV+K
Sbjct: 16 FQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLK 75
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC---VLDIFQRLNIMIDVAA 151
S+ H N+IKI + +V+E G L + + S+ L +M +
Sbjct: 76 SLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN 135
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
AL Y H S V+H DLKP N+L D + + DFG+A+L ++ S T T
Sbjct: 136 ALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGT 189
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIML 235
YMAPE + V+ D++S G+++
Sbjct: 190 ALYMAPEVFKRD-VTFKCDIWSAGVVM 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++ G+FG+VYK I +G +V + V K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+++ MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 240 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 51 IGRGSFGSVYKARIQDGME------VAVKVFHLQCGGVFK-SFDVECEVMKSIRHRNLIK 103
+G+GSFG VY+ +D ++ VAVK + + F E VMK ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS---------SNCVLDIFQRLNIMIDVAAALE 154
++ S +V+E M HG L+ L S + + + + ++A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
YL+ + +H DL N ++ + + DFG+ + + + + L + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
E ++G +T+ D++SFG++L E + + + + E LK+ ++D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGG 249
Query: 275 LLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
L + D C V +L C + + R EIV L
Sbjct: 250 YLDQPD-------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ G FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 433 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 487
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 45 FSENNLI-----GRGSFGSVYKA-----RIQDG-MEVAVKVFHLQCG-GVFKSFDVECEV 92
F NL+ G G FG V KA + + G VAVK+ + E V
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 93 MKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCV---------------- 136
+K + H ++IK+ CS D L++EY +GSL L S V
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 137 -------LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 189
L + ++ ++ ++YL ++H DL N+L+ + +SDFG+
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 190 AKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
++ + ED ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 197 SRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 47 ENNLIGRGSFGSVYKARIQDGMEVAVKVFHL-----QCGGVFKSFDVECEVMKSIRHRNL 101
E+ +G G+FG+V K Q V + + E VM+ + + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++I C + + LV+E G L K L + V D + ++ V+ ++YL
Sbjct: 434 VRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---E 488
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-EDQSKSQTQTLATIGYMAPEYGREG 220
+ +H DL NVLL A +SDFG++K L E+ K+QT + + APE
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 221 RVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMT 254
+ S+ DV+SFG+++ E F+ +KP + E+T
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 16 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 240 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ S++ + L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 178
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ G FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-GKAFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 123/270 (45%), Gaps = 34/270 (12%)
Query: 48 NNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV------ECEVMKSIRHRN 100
+ +G G+FG V Q G +VAVK+ + Q +S DV E + +K RH +
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+IK+ S +V+EY+ G L + V ++ R + + +A++Y H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH--- 128
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
V+H DLKP NVLLD +M A ++DFG++ +++ + + + Y APE G
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRDSCGSPNYAAPEV-ISG 184
Query: 221 RVSTNG--DVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVSNLLPISVME 269
R+ D++S G++L P D KI G + +++ + +M
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 244
Query: 270 IVDANLLSRED-----KHFAAKEQCVSFVF 294
++ + L R +H K+ S++F
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQDLPSYLF 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 126/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 9 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 35/233 (15%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV--------- 88
F D + IG G++G V AR + G +VA+K + +FDV
Sbjct: 50 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLR 102
Query: 89 ECEVMKSIRHRNLIKII----STCSNDDFKAL--VLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +++K +H N+I I T +FK++ VL+ M L + ++SS L +
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHV 160
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TGEDQSK 200
+ + L+Y+H SA VIH DLKPSN+L+++N + DFG+A+ L + +
Sbjct: 161 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 201 SQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGE 252
T+ +AT Y APE T D++S G + E ++ ++F G+
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGK 266
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ S++ + L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 177
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 209
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++G G+FG+VYK I +G +V + V K E
Sbjct: 11 LRILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 69
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 70 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 128
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG AKLL E++ I
Sbjct: 129 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ LP +
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 245
Query: 269 EIVDANLLSRE 279
+D ++ R+
Sbjct: 246 CTIDVYMIMRK 256
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 40/297 (13%)
Query: 53 RGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEV--MKSIRHRNLIKIIST--- 107
RG FG V+KA++ + VAVK+F +Q +S+ E EV + ++H N+++ I
Sbjct: 34 RGRFGCVWKAQLLNEY-VAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGAEKR 89
Query: 108 -CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF-------G 159
S D L+ + GSL L ++ V+ + +I +A L YLH G
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIGYMAPEYGR 218
+ + H D+K NVLL +N+ A ++DFG+A K G+ + Q + T YMAPE
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAPEV-L 205
Query: 219 EGRVSTNG------DVYSFGIMLMETFTK----KKPTDKI---FAGEMTLKYWVSNLLPI 265
EG ++ D+Y+ G++L E ++ P D+ F E+ + ++ +
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEV 265
Query: 266 SVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIR 322
V + L KH C + EC AE R++A + R+ +++
Sbjct: 266 VVHKKKRPVLRDYWQKHAGMAMLCETI-----EECWDHDAEARLSAGCVGERITQMQ 317
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 31/280 (11%)
Query: 49 NLIGRGSFGSVYKA-RIQDG----MEVAVKVFHLQCGG-VFKSFDVECEVMKSIRHRNLI 102
++G G+FG+VYK I DG + VA+KV K E VM + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+++ C + LV + MP+G L + + L LN + +A + YL
Sbjct: 83 RLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
++H DL NVL+ ++DFG+A+LL ++ I +MA E R
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 223 STNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDK 281
+ DV+S+G+ + E T KP D I A E+ +LL + ++
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDGIPAREI-------------------PDLLEKGER 239
Query: 282 HFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI 321
C V+ + ++C + +E R +E+V+ ++
Sbjct: 240 -LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 36/237 (15%)
Query: 23 NMPPVATWRR---FSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGMEV-AVKVFHLQ 78
+MPPV F + E+ +A IG+GSFG V + D ++ A+K + Q
Sbjct: 1 SMPPVFDENEDVNFDHFEILRA---------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQ 51
Query: 79 -------CGGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLY 131
VFK E ++M+ + H L+ + + +++ +V++ + G L L
Sbjct: 52 KCVERNEVRNVFK----ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ 107
Query: 132 SSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 191
+ + +L + ++ AL+YL + +IH D+KP N+LLD++ H++DF IA
Sbjct: 108 QNVHFKEETVKL-FICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAA 163
Query: 192 LLTGEDQSKSQTQTLA-TIGYMAPEY--GREGR-VSTNGDVYSFGIMLMETFTKKKP 244
+L E +Q T+A T YMAPE R+G S D +S G+ E ++P
Sbjct: 164 MLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 52/238 (21%)
Query: 40 QATDGFSEN----NLIGRGSFGSVYKARIQDGM--EVAVKVFHLQCGGVFKSFDV----- 88
+T GF EN ++GRG SV + I E AVK+ + GG F + +V
Sbjct: 10 HSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 89 ----ECEVMKSIR-HRNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLD 138
E ++++ + H N+I++ T + F LV + M G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 139 IFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 198
I + L ++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 129 IMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DP 176
Query: 199 SKSQTQTLATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ + T Y+APE YG+E D++S G+++ P
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ------------EPWI-GLNGSQILHKID-----KEG 231
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 45 FSENNLIGRGSFGSVYKA---RIQDGMEVAVKVFHLQCGGVFKSF-DVECEVMKSIRHRN 100
F++ IG+GSFG V+K R Q VA+K+ L+ E V+
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQ--QVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+ K + +++EY+ GS L + D FQ ++ ++ L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP--FDEFQIATMLKEILKGLDYLH--- 137
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
S IH D+K +NVLL + L+DFG+A LT D + + T +MAPE ++
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQS 195
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
+ D++S GI +E + P
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPP 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 111/233 (47%), Gaps = 35/233 (15%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV--------- 88
F D + IG G++G V AR + G +VA+K + +FDV
Sbjct: 51 FDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIK-------KIPNAFDVVTNAKRTLR 103
Query: 89 ECEVMKSIRHRNLIKII----STCSNDDFKAL--VLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +++K +H N+I I T +FK++ VL+ M L + ++SS L +
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQP-LTLEHV 161
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TGEDQSK 200
+ + L+Y+H SA VIH DLKPSN+L+++N + DFG+A+ L + +
Sbjct: 162 RYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 201 SQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGE 252
T+ +AT Y APE T D++S G + E ++ ++F G+
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPGK 267
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ------------EPWI-GLNGSQILHKID-----KEG 241
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++ G+FG+VYK I +G +V + V K E
Sbjct: 9 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 67
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 68 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 126
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 232
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 233 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 126/297 (42%), Gaps = 33/297 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVF-----HLQCGGVFKSFDVE 89
L + + T+ F + ++ G+FG+VYK I +G +V + V K E
Sbjct: 16 LRILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDE 74
Query: 90 CEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
VM S+ + ++ +++ C + L+ + MP G L + + LN + +
Sbjct: 75 AYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 133
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
A + YL ++H DL NVL+ ++DFG+AKLL E++ I
Sbjct: 134 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+MA E + DV+S+G+ + E T KP D I A E++ S++
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----------SIL 239
Query: 269 EIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKI-RDS 324
E + + C V+ + ++C + A+ R +E++ K+ RD
Sbjct: 240 E---------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 287
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 23/219 (10%)
Query: 45 FSENNL-----IGRGSFGSVYKARI-----QDG-MEVAVKVFHLQCGGVFK-SFDVECEV 92
F NNL +G G+FG V +A +D ++VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 93 MKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
M + +H N++ ++ C++ ++ EY +G L L + VL+ I +
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 152 ALEYLHFG----------YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKS 201
+ LHF S IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ------------EPWI-GLNGSQILHKID-----KEG 231
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 129
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQ------------EPWI-GLNGSQILHKID-----KEG 231
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQ------------EPWIG-LNGSQILHKID-----KEG 235
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 133
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQ------------EPWI-GLNGSQILHKID-----KEG 235
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 105/268 (39%), Gaps = 34/268 (12%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIK 103
+G GSFG V + A + VAVK L F E M S+ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ K +V E P GSL L + + +L R + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---S 139
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPEYGREG 220
IH DL N+LL + + DFG+ + L +D Q + APE +
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 221 RVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S D + FG+ L E FT + + W+ L ++ +D +E
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQ------------EPWI-GLNGSQILHKID-----KEG 241
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQR 308
+ E C ++N+ ++C E R
Sbjct: 242 ERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 13/216 (6%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHL--QCGGVFKSFDVECEVMKSIR 97
+ + F + IG G++G VYKAR + G VA+K L + GV + E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K++ ++ LV E++ L+K + +S L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDAS--ALTGIPLPLIKSYLFQLLQGLA 120
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYG 217
F +S V+H DLKP N+L++ L+DFG+A+ ++ + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--VRTYXHEVVTLWYRAPEIL 178
Query: 218 REGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ ST D++S G + E T++ +F G+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR----ALFPGD 210
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 104/238 (43%), Gaps = 52/238 (21%)
Query: 40 QATDGFSEN----NLIGRGSFGSVYKARIQDGM--EVAVKVFHLQCGGVFKSFDV----- 88
+T GF EN ++GRG SV + I E AVK+ + GG F + +V
Sbjct: 10 HSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELRE 68
Query: 89 ----ECEVMKSIR-HRNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLD 138
E ++++ + H N+I++ T + F LV + M G L EK S
Sbjct: 69 ATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK 128
Query: 139 IFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ 198
I + L ++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D
Sbjct: 129 IMRAL---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DP 176
Query: 199 SKSQTQTLATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T Y+APE YG+E D++S G+++ P
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 228
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 49 NLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV------ECEVMKSIRHRNL 101
+ +G G+FG V + + G +VAVK+ + Q +S DV E + +K RH ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
IK+ S +V+EY+ G L + N LD + + + + ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM- 136
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
V+H DLKP NVLLD +M A ++DFG++ +++ + + + Y APE GR
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMS---DGEFLRXSCGSPNYAAPEVI-SGR 190
Query: 222 VSTNG--DVYSFGIMLMETFTKKKPTD 246
+ D++S G++L P D
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 34/224 (15%)
Query: 44 GFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
++ +IG GSFG V++A++ + EVA+K LQ FK + E ++M+ ++H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV-LQ-DKRFK--NRELQIMRIVKHPNVVD 96
Query: 104 IIS-TCSNDD-----FKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNI------MIDVAA 151
+ + SN D F LVLEY+P E +S + Q + + M +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG 210
+L Y+H S + H D+KP N+LLD + V L DFG AK+L + + S + +
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS---XICSRY 206
Query: 211 YMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
Y APE +G +TN D++S G ++ E + +F GE
Sbjct: 207 YRAPELIFGATN-YTTNIDIWSTGCVMAELMQGQ----PLFPGE 245
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 52/291 (17%)
Query: 51 IGRGSFGSVYKARIQ------DGMEVAVKVFHLQCGGVFKSFD-----VECEVMKSIRHR 99
+G G+FG VY+ ++ ++VAVK V+ D +E ++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP----EVYSEQDELDFLMEALIISKFNHQ 108
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLY------SSNCVLDIFQRLNIMIDVAAAL 153
N+++ I + ++LE M G L+ L S L + L++ D+A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 154 EYL---HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
+YL HF IH D+ N LL VA + DFG+A+ + + +
Sbjct: 169 QYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISV 267
+ +M PE EG ++ D +SFG++L E F+ G M + V
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------LGYMPYPSKSNQ----EV 269
Query: 268 MEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
+E V + R D + C V+ + +C E R N I+ R+
Sbjct: 270 LEFVTSG--GRMD----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 49 NLIGRGSFGSVYKARIQDGMEV----AVKVFHLQCGGVFKSF--DVECEVMKSIRHRNLI 102
++G+GSFG V+ + G + A+KV V +E +++ + H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNI-MIDVAAALEYLHFGYS 161
K+ + L+L+++ G L L S V+ + + + ++A AL++LH S
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
+I+ DLKP N+LLD+ L+DFG++K D K T+ YMAPE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
+ + D +SFG+++ E T P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHL--------QCGGVFKSFD 87
E +Q D ++IGRG V + G E AVK+ + Q V ++
Sbjct: 91 EFYQKYDP---KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 88 VECEVMKSIR-HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
E +++ + H ++I +I + + F LV + M G L L + L + +IM
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIM 206
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQT 205
+ A+ +LH + ++H DLKP N+LLDDNM LSDFG + L GE +
Sbjct: 207 RSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLREL 259
Query: 206 LATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
T GY+APE YG+E D+++ G++L P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKE------VDLWACGVILFTLLAGSPP 304
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 49 NLIGRGSFGSVYKARIQDGMEV----AVKVFHLQCGGVFKSF--DVECEVMKSIRHRNLI 102
++G+GSFG V+ + G + A+KV V +E +++ + H ++
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNI-MIDVAAALEYLHFGYS 161
K+ + L+L+++ G L L S V+ + + + ++A AL++LH S
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH---S 145
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
+I+ DLKP N+LLD+ L+DFG++K D K T+ YMAPE
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
+ + D +SFG+++ E T P
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 49 NLIGRGSFGSVYKARIQDGMEV----AVKVFHLQCGGVFKSF--DVECEVMKSIRHRNLI 102
++G+GSFG V+ + G + A+KV V +E +++ + H ++
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNI-MIDVAAALEYLHFGYS 161
K+ + L+L+++ G L L S V+ + + + ++A AL++LH S
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH---S 144
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
+I+ DLKP N+LLD+ L+DFG++K D K T+ YMAPE
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
+ + D +SFG+++ E T P
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 49 NLIGRGSFGSVY----KARIQDGMEVAVKVFHLQCGGVFKSF--DVECEVMKSIRHRNLI 102
++G+GSFG V+ R G A+KV V +E +++ + H ++
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNI-MIDVAAALEYLHFGYS 161
K+ + L+L+++ G L L S V+ + + + ++A L++LH S
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALGLDHLH---S 148
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE-YGREG 220
+I+ DLKP N+LLD+ L+DFG++K D K T+ YMAPE R+G
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
S + D +S+G+++ E T P
Sbjct: 207 H-SHSADWWSYGVLMFEMLTGSLP 229
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 30/255 (11%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-------KSIRHRNLI 102
+IG+GSFG V AR EV V LQ + K + E +M K+++H L+
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKE-EKHIMSERNVLLKNVKHPFLV 102
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+ + D VL+Y+ G L L C L+ R ++A+AL YLH S
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SL 158
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREGR 221
+++ DLKP N+LLD L+DFG+ K + S T T T Y+APE +
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 222 VSTNGDVYSFGIMLMETFTKKKP---------TDKIFAGEMTLKYWVSNLLPISVMEIVD 272
D + G +L E P D I + LK ++N S +++
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITN----SARHLLE 271
Query: 273 ANLLSREDKHFAAKE 287
L K AK+
Sbjct: 272 GLLQKDRTKRLGAKD 286
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 51 IGRGSFGSVYKAR--IQDGMEVAVKVFHLQCG--GVFKSFDVECEVMK---SIRHRNLIK 103
IG G++G V+KAR G VA+K +Q G G+ S E V++ + H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 104 IISTC--SNDDFKA---LVLEYMPHG---SLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
+ C S D + LV E++ L+K I ++M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
LH S V+H DLKP N+L+ + L+DFG+A++ + + + T + T+ Y APE
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPE 189
Query: 216 YGREGRVSTNGDVYSFGIMLMETFTKK 242
+ +T D++S G + E F +K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAVK+ L + K F E +MK + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H + ++H
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVH 129
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 186
Query: 226 GDVYSFGIMLMETFTKKKPTD 246
DV+S G++L + P D
Sbjct: 187 VDVWSLGVILYTLVSGSLPFD 207
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
FS + +IGRG FG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 105 IST-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
+ST C + F + +L+ M G L L + R ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 304
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE++H + V++ DLKP+N+LLD++ +SD G+A + K ++ T GYM
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYM 357
Query: 213 APEYGREG-RVSTNGDVYSFGIMLME------TFTKKKPTDKIFAGEMTL 255
APE ++G ++ D +S G ML + F + K DK MTL
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
FS + +IGRG FG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 105 IST-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
+ST C + F + +L+ M G L L + R ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 304
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE++H + V++ DLKP+N+LLD++ +SD G+A + K ++ T GYM
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYM 357
Query: 213 APEYGREG-RVSTNGDVYSFGIMLME------TFTKKKPTDKIFAGEMTL 255
APE ++G ++ D +S G ML + F + K DK MTL
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 51 IGRGSFGSVYKAR--IQDGMEVAVKVFHLQCG--GVFKSFDVECEVMK---SIRHRNLIK 103
IG G++G V+KAR G VA+K +Q G G+ S E V++ + H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 104 IISTC--SNDDFKA---LVLEYMPHG---SLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
+ C S D + LV E++ L+K I ++M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
LH S V+H DLKP N+L+ + L+DFG+A++ + + + T + T+ Y APE
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPE 189
Query: 216 YGREGRVSTNGDVYSFGIMLMETFTKK 242
+ +T D++S G + E F +K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
FS + +IGRG FG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 244
Query: 105 IST-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
+ST C + F + +L+ M G L L + R ++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 303
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE++H + V++ DLKP+N+LLD++ +SD G+A + K ++ T GYM
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYM 356
Query: 213 APEYGREG-RVSTNGDVYSFGIMLME------TFTKKKPTDKIFAGEMTL 255
APE ++G ++ D +S G ML + F + K DK MTL
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
FS + +IGRG FG VY R D K++ ++C + + E + ++ R ++ +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKAD----TGKMYAMKCLDKKRIKMKQGETL-ALNERIMLSL 245
Query: 105 IST-------CSNDDFK-----ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA 152
+ST C + F + +L+ M G L L + R ++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG 304
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE++H + V++ DLKP+N+LLD++ +SD G+A + K ++ T GYM
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS----KKKPHASVGTHGYM 357
Query: 213 APEYGREG-RVSTNGDVYSFGIMLME------TFTKKKPTDKIFAGEMTL 255
APE ++G ++ D +S G ML + F + K DK MTL
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 24/207 (11%)
Query: 51 IGRGSFGSVYKAR--IQDGMEVAVKVFHLQCG--GVFKSFDVECEVMK---SIRHRNLIK 103
IG G++G V+KAR G VA+K +Q G G+ S E V++ + H N+++
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 104 IISTC--SNDDFKA---LVLEYMPHG---SLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
+ C S D + LV E++ L+K I ++M + L++
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI---KDMMFQLLRGLDF 135
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
LH S V+H DLKP N+L+ + L+DFG+A++ + + + T + T+ Y APE
Sbjct: 136 LH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPE 189
Query: 216 YGREGRVSTNGDVYSFGIMLMETFTKK 242
+ +T D++S G + E F +K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 52/234 (22%)
Query: 44 GFSEN----NLIGRGSFGSVYKARIQDGM--EVAVKVFHLQCGGVFKSFDV--------- 88
GF EN ++GRG SV + I E AVK+ + GG F + +V
Sbjct: 1 GFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 89 ECEVMKSIR-HRNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLDIFQR 142
E ++++ + H N+I++ T + F LV + M G L EK S I +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
L ++V AL L+ ++H DLKP N+LLDD+M L+DFG + L D +
Sbjct: 120 L---LEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQL---DPGEKL 167
Query: 203 TQTLATIGYMAPE------------YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T Y+APE YG+E D++S G+++ P
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIMYTLLAGSPP 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAVK+ L + K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 226 GDVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVS 260
DV+S G++L + P D ++ G+ + +++S
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 51 IGRGSFGSVYKARIQDGME-VAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIIST 107
IG G++G+V+KA+ ++ E VA+K L GV S E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+D LV E+ L+K S N LD + + + L + H S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STNG 226
DLKP N+L++ N L+DFG+A+ + + + T+ Y P+ ++ ST+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 227 DVYSFGIMLMETFTKKKPTDKIFAG 251
D++S G + E +P +F G
Sbjct: 184 DMWSAGCIFAELANAARP---LFPG 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 27/286 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQ-CGGVFKSFDVECEVMKSIRHRN 100
D + +IG G+ V A E VA+K +L+ C E + M H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYS-------SNCVLDIFQRLNIMIDVAAAL 153
++ ++ D LV++ + GS+ + + VLD I+ +V L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TGEDQSKSQTQT--LATIG 210
EYLH IH D+K N+LL ++ ++DFG++ L TG D ++++ + + T
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 211 YMAPEYGREGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVME 269
+MAPE + R D++SFGI +E T P K + L + N P
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLETG 245
Query: 270 IVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
+ D +L + K F + +S C + E+R A E++
Sbjct: 246 VQDKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELL 281
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAVK+ L + K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 226 GDVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVS 260
DV+S G++L + P D ++ G+ + +++S
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 85
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 146 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 198
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 199 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 89
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 202
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 203 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 238
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 78
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 139 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 191
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 192 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 96
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 157 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 209
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 210 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 245
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G+FG VYKA+ ++ + A KV + + + VE +++ S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY-----GREGRVST 224
K N+L + L+DFG++ T Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRD--SFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
DV+S GI L+E + P ++ + LK
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G+FG VYKA+ ++ + A KV + + + VE +++ S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY-----GREGRVST 224
K N+L + L+DFG++ T Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRD--SFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
DV+S GI L+E + P ++ + LK
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR + G EVAVK+ L + K F E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H Y ++H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVH 137
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPE 194
Query: 226 GDVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVS 260
DV+S G++L + P D ++ G+ + +++S
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 238
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 89
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 150 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 202
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 203 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 238
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 81
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 142 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 194
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 195 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 230
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 27/286 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQ-CGGVFKSFDVECEVMKSIRHRN 100
D + +IG G+ V A E VA+K +L+ C E + M H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYS-------SNCVLDIFQRLNIMIDVAAAL 153
++ ++ D LV++ + GS+ + + VLD I+ +V L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL-TGEDQSKSQTQT--LATIG 210
EYLH IH D+K N+LL ++ ++DFG++ L TG D ++++ + + T
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 211 YMAPEYGREGR-VSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVME 269
+MAPE + R D++SFGI +E T P K + L + N P
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK-YPPMKVLMLTLQNDPPSLETG 250
Query: 270 IVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIV 315
+ D +L + K F + +S C + E+R A E++
Sbjct: 251 VQDKEMLKKYGKSF---RKMISL-------CLQKDPEKRPTAAELL 286
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 11/212 (5%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G+FG VYKA+ ++ + A KV + + + VE +++ S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
++ +++E+ G+++ + L Q + AL YLH +IH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY-----GREGRVST 224
K N+L + L+DFG++ T Q + + T +MAPE ++
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRD--XFIGTPYWMAPEVVMCETSKDRPYDY 219
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
DV+S GI L+E + P ++ + LK
Sbjct: 220 KADVWSLGITLIEMAEIEPPHHELNPMRVLLK 251
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 111
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSXICSRYYRA 224
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 225 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 260
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 77
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 138 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 190
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 191 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIISTC 108
IG G++G VYKA+ G A+K L+ G+ + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
LV E++ L+K L L+ + ++ + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE--YGREGRVSTNG 226
LKP N+L++ ++DFG+A+ + T + T+ Y AP+ G + + ST
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEIVTLWYRAPDVLMGSK-KYSTTI 182
Query: 227 DVYSFGIMLME 237
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 90
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 151 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 203
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 204 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAVK+ L + K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPE 193
Query: 226 GDVYSFGIMLMETFTKKKPTD 246
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAV++ L + K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDGPE 193
Query: 226 GDVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVS 260
DV+S G++L + P D ++ G+ + +++S
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 38/278 (13%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRHRNLI 102
+G G+FGSV Y+ R + ++VA+KV G K+ E ++M + + ++
Sbjct: 18 LGCGNFGSVRQGVYRMR-KKQIDVAIKVLK---QGTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
++I C + LV+E G L K L + + ++ V+ ++YL
Sbjct: 74 RLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EK 129
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ-SKSQTQTLATIGYMAPEYGREGR 221
+H DL NVLL + A +SDFG++K L +D +++ + + APE +
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 222 VSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S+ DV+S+G+ + E + +KP K+ E VM ++ +
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------------VMAFIE------QG 229
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
K +C ++ L +C + E R + + R+
Sbjct: 230 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 111
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 224
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 225 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 260
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAV++ L + K F E +MK + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV+EY G + L + + + R + +A++Y H + ++H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T ++ + + Y APE + +
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPE 193
Query: 226 GDVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVS 260
DV+S G++L + P D ++ G+ + +++S
Sbjct: 194 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 237
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRHRNLIKIIS 106
+G GSFG V+ R + +G A+KV + K + E ++ + H +I++
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
T + ++++Y+ G L L S + + +V ALEYLH S +I+
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIY 129
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREGRVSTN 225
DLKP N+LLD N ++DFG AK + T L T Y+APE + +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVP------DVTYXLCGTPDYIAPEVVSTKPYNKS 183
Query: 226 GDVYSFGIMLMETFTKKKP 244
D +SFGI++ E P
Sbjct: 184 IDWWSFGILIYEMLAGYTP 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKV---FHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+IGRG+FG V R + +V A+K+ F + F E ++M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+D + +V+EYMP G L L S+ V + + R +V AL+ +H S I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFI 195
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE----YGREGR 221
H D+KP N+LLD + L+DFG + E + T + T Y++PE G +G
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGY 254
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D +S G+ L E P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKV---FHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+IGRG+FG V R + +V A+K+ F + F E ++M ++++
Sbjct: 76 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+D + +V+EYMP G L L S+ V + + R +V AL+ +H S I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFI 190
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE----YGREGR 221
H D+KP N+LLD + L+DFG + E + T + T Y++PE G +G
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGY 249
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D +S G+ L E P
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTP 272
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 82
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 143 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 195
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 196 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 231
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKV---FHLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+IGRG+FG V R + +V A+K+ F + F E ++M ++++
Sbjct: 81 VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 140
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+D + +V+EYMP G L L S+ V + + R +V AL+ +H S I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARF-YTAEVVLALDAIH---SMGFI 195
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE----YGREGR 221
H D+KP N+LLD + L+DFG + E + T + T Y++PE G +G
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPDYISPEVLKSQGGDGY 254
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D +S G+ L E P
Sbjct: 255 YGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIISTC 108
IG G++G VYKA+ G A+K L+ G+ + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
LV E++ L+K L L+ + ++ + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE--YGREGRVSTNG 226
LKP N+L++ ++DFG+A+ + T + T+ Y AP+ G + + ST
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSK-KYSTTI 182
Query: 227 DVYSFGIMLME 237
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIISTC 108
IG G++G VYKA+ G A+K L+ G+ + E ++K ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
LV E++ L+K L L+ + ++ + + Y H V+H D
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 169 LKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE--YGREGRVSTNG 226
LKP N+L++ ++DFG+A+ + T + T+ Y AP+ G + + ST
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFG--IPVRKYTHEVVTLWYRAPDVLMGSK-KYSTTI 182
Query: 227 DVYSFGIMLME 237
D++S G + E
Sbjct: 183 DIWSVGCIFAE 193
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 105
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 166 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 218
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 219 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 113
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 174 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 226
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 227 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 262
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 115
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 228
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 229 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIK 103
+++ +IG GSFG VY+A++ D E VA+K LQ FK + E ++M+ + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQ-DKRFK--NRELQIMRKLDHCNIVR 156
Query: 104 I----ISTCSNDD--FKALVLEYMPHGSLEKCLYSSNC--VLDIFQRLNIMIDVAAALEY 155
+ S+ D + LVL+Y+P + S L + M + +L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 156 LH-FGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+H FG + H D+KP N+LLD D V L DFG AK L + + + + Y A
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRA 269
Query: 214 PE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
PE +G S+ DV+S G +L E + IF G+
Sbjct: 270 PELIFGATDYTSSI-DVWSAGCVLAELLLGQ----PIFPGD 305
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + M VA+K + V + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP-IKWMAPESINFRRFTSA 192
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 193 SDVWMFGVCMWE 204
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 39 FQATDGFSENNLIGRGSFG-SVYKARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKS 95
FQ+ + + IG GSFG ++ +DG + +K ++ + E V+ +
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQR---LNIMIDVAAA 152
++H N+++ + + +V++Y G L K + + VL FQ L+ + + A
Sbjct: 80 MKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL--FQEDQILDWFVQICLA 137
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
L+++H ++H D+K N+ L + L DFGIA++L + + T Y+
Sbjct: 138 LKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN--STVELARACIGTPYYL 192
Query: 213 APEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISV 267
+PE + D+++ G +L E T K + + LK + P+S+
Sbjct: 193 SPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSL 247
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 12/225 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 126
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG++ L E + + T YM+PE +
Sbjct: 127 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSPERLQG 180
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLP 264
S D++S G+ L+E + P + E+ L Y V+ P
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPP 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDV-ECEVMKS 95
++ + F +L+G G++G V A + E VA+K +F + E +++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 96 IRHRNLIKIISTCSNDDFKAL----VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
+H N+I I + D F+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL----------TGEDQSKS 201
A++ LH + VIH DLKPSN+L++ N + DFG+A+++ TG Q
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG--QQSG 178
Query: 202 QTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAG 251
T+ +AT Y APE + S DV+S G +L E F ++ IF G
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPG 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 15/205 (7%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
+G GSFG V A + +VA+K L+ + + E +K +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ +V+EY + + D +R + A+EY H ++H
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCH---RHKIVH 131
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG 226
DLKP N+LLDDN+ ++DFG++ ++T + K+ + + Y APE G++
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-INGKLYAGP 187
Query: 227 --DVYSFGIMLMETFTKKKPTDKIF 249
DV+S GI+L + P D F
Sbjct: 188 EVDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 23/232 (9%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSF-DVECEVMKSIRHRNLI 102
F++ + IG+GSFG VYK EV A+K+ L+ E V+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+ + +++EY+ GS L L+ I+ ++ L+YLH S
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLH---SE 135
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
IH D+K +NVLL + L+DFG+A LT D + + T +MAPE ++
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 223 STNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
D++S GI +E K +P + S+L P+ V+ ++ N
Sbjct: 194 DFKADIWSLGITAIE-LAKGEPPN-------------SDLHPMRVLFLIPKN 231
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 32/224 (14%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRH- 98
A+D F E ++G+G+FG V KAR D A+K + E ++ S+ H
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQ 62
Query: 99 ------------RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
RN +K ++ + +EY +G+L ++S N + +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK-------LLTGEDQ- 198
+ AL Y+H S +IH DLKP N+ +D++ + DFG+AK +L + Q
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 199 ----SKSQTQTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLME 237
S + T + T Y+A E G + D+YS GI+ E
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 177
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
S D++S G+ L+E + P A E+ L +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 177
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
S D++S G+ L+E + P A E+ L +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 50 LIGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVFK-SFDVECEVMKSI-RHRNL 101
++G G+FG V A + ++VAVK+ + + + E ++M + H N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCL-------------YSSNCVLDIFQRLNIMI- 147
+ ++ C+ L+ EY +G L L Y + L+ + LN++
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 148 --------DVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS 199
VA +E+L F +H DL NVL+ V + DFG+A+ + +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 200 KSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ + +MAPE EG + DV+S+GI+L E F+
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 150
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 151 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 204
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
S D++S G+ L+E + P A E+ L +
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 51 IGRGSFGSVYKARIQDGME-VAVKVFHLQCG--GVFKSFDVECEVMKSIRHRNLIKIIST 107
IG G++G+V+KA+ ++ E VA+K L GV S E ++K ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+D LV E+ L+K S N LD + + + L + H S V+H
Sbjct: 70 LHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHR 125
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STNG 226
DLKP N+L++ N L++FG+A+ + + + T+ Y P+ ++ ST+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 227 DVYSFGIMLMETFTKKKPTDKIFAG 251
D++S G + E +P +F G
Sbjct: 184 DMWSAGCIFAELANAGRP---LFPG 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 177
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
S D++S G+ L+E + P A E+ L +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 215
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 106/231 (45%), Gaps = 28/231 (12%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDV-ECEVMKS 95
++ + F +L+G G++G V A + E VA+K +F + E +++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 96 IRHRNLIKIISTCSNDDFKAL----VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
+H N+I I + D F+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL----------TGEDQSKS 201
A++ LH + VIH DLKPSN+L++ N + DFG+A+++ TG Q
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG--QQSG 178
Query: 202 QTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAG 251
T+ +AT Y APE + S DV+S G +L E F ++ IF G
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPG 225
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 177
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
S D++S G+ L+E + P A E+ L +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A G +VAVK L+ + E +M+ H N++ + S+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL YLH + VIH D+
Sbjct: 113 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDI 167
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE T D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 230 SFGIMLMETFTKKKP 244
S GIM++E + P
Sbjct: 226 SLGIMVIEMIDGEPP 240
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 11/218 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 185
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 239
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKY 257
S D++S G+ L+E + P A E+ L +
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 277
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + M VA+K + V + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 192
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 193 SDVWMFGVCMWE 204
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 57 GSVYKARIQDGMEVAVKVFHLQCGGVFKS--FDVECEVMKSIRHRNLIKIISTCSND--D 112
G ++K R Q G ++ VKV ++ KS F+ EC ++ H N++ ++ C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 113 FKALVLEYMPHGSLEKCLY-SSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKP 171
L+ + P+GSL L+ +N V+D Q + +D A +LH H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNS 141
Query: 172 SNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN---GDV 228
+V +D++ A +S + QS + A ++APE ++ TN D
Sbjct: 142 RSVXIDEDXTARISXADVKFSF----QSPGRXYAPA---WVAPEALQKKPEDTNRRSADX 194
Query: 229 YSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLP 264
+SF ++L E T++ P + E+ K + L P
Sbjct: 195 WSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRP 230
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 39/213 (18%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
+G+G +G V++ Q G VAVK+F + KS+ E E+ ++ RH N++ I++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH---FGYS 161
+ L+ Y GSL Y LD L I++ +A+ L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 162 A-PVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT-----LATIGYMAP 214
P I H DLK N+L+ N ++D G+A + QS +Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 215 E----------YGREGRVSTNGDVYSFGIMLME 237
E + RV D+++FG++L E
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWE 215
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 39/213 (18%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
+G+G +G V++ Q G VAVK+F + KS+ E E+ ++ RH N++ I++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 71
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH---FGYS 161
+ L+ Y GSL Y LD L I++ +A+ L +LH FG
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 162 A-PVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT-----LATIGYMAP 214
P I H DLK N+L+ N ++D G+A + QS +Q + T YMAP
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 215 E----------YGREGRVSTNGDVYSFGIMLME 237
E + RV D+++FG++L E
Sbjct: 187 EVLDETIQVDCFDSYKRV----DIWAFGLVLWE 215
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 39/213 (18%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
+G+G +G V++ Q G VAVK+F + KS+ E E+ ++ RH N++ I++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASD 100
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH---FGYS 161
+ L+ Y GSL Y LD L I++ +A+ L +LH FG
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 162 A-PVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT-----LATIGYMAP 214
P I H DLK N+L+ N ++D G+A + QS +Q + T YMAP
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 215 E----------YGREGRVSTNGDVYSFGIMLME 237
E + RV D+++FG++L E
Sbjct: 216 EVLDETIQVDCFDSYKRV----DIWAFGLVLWE 244
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 30/283 (10%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 123
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 177
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRE 279
S D++S G+ L+E + P A E + P+++ E++D +
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE-------DSRPPMAIFELLDYIVNEPP 230
Query: 280 DKHFAAKEQCVSFVFNLAME-----CTVESAEQRINAKEIVTR 317
K S VF+L + C +++ +R + K+++
Sbjct: 231 PK-------LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG--GVFKSFDVECEVMK--- 94
AT + IG G++G+VYKAR G VA+K + G G+ S E +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 95 SIRHRNLIKIISTC----SNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
+ H N+++++ C ++ + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L++LH ++H DLKP N+L+ L+DFG+A++ + + + + T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTL 175
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKK 243
Y APE + +T D++S G + E F +K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + M VA+K + V + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 572
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 573 SDVWMFGVCMWE 584
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 45 FSENNL-----IGRGSFGSVYKARI-----QDG-MEVAVKVFHLQCGGVFK-SFDVECEV 92
F NNL +G G+FG V +A +D ++VAVK+ K + E ++
Sbjct: 35 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 94
Query: 93 MKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLY---------SSNCVLDIFQR 142
M + +H N++ ++ C++ ++ EY +G L L L++
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + + +
Sbjct: 155 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 211
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
+G GSFG V A G +VA+K+ + L + + E ++ +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 107 TCSNDDFKALVLEYMPHGSLEKCL----YSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+ D +V+EY + + + S FQ+ + +A+EY H
Sbjct: 72 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 122
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
++H DLKP N+LLD+++ ++DFG++ ++T + K+ + + Y APE G++
Sbjct: 123 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKL 178
Query: 223 STNG--DVYSFGIMLMETFTKKKPTD 246
DV+S G++L ++ P D
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
+G GSFG V A G +VA+K+ + L + + E ++ +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 107 TCSNDDFKALVLEYMPHGSLEKCL----YSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+ D +V+EY + + + S FQ+ + +A+EY H
Sbjct: 82 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 132
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
++H DLKP N+LLD+++ ++DFG++ ++T + K+ + + Y APE G++
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKL 188
Query: 223 STNG--DVYSFGIMLMETFTKKKPTD 246
DV+S G++L ++ P D
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V AR + G +VAVK+ L+ + E +M+ +H N++++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
+ +++E++ G+L + S L+ Q + V AL YLH + VIH D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDI 167
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ +D K + + T +MAPE +T D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKX-LVGTPYWMAPEVISRSLYATEVDIW 225
Query: 230 SFGIMLMETFTKKKP 244
S GIM++E + P
Sbjct: 226 SLGIMVIEMVDGEPP 240
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
+G GSFG V A G +VA+K+ + L + + E ++ +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 107 TCSNDDFKALVLEYMPHGSLEKCL----YSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+ D +V+EY + + + S FQ+ + +A+EY H
Sbjct: 76 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 126
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
++H DLKP N+LLD+++ ++DFG++ ++T + K+ + + Y APE G++
Sbjct: 127 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKL 182
Query: 223 STNG--DVYSFGIMLMETFTKKKPTD 246
DV+S G++L ++ P D
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 130/301 (43%), Gaps = 40/301 (13%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHL-QCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG+G +G V+ + + G +VAVKVF + F+ ++ V+ +RH N++ I+
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVL--MRHENILGFIAA-- 99
Query: 110 NDDFKA--------LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF--- 158
D K L+ +Y +GSL L S+ LD L + + L +LH
Sbjct: 100 --DIKGTGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 159 -GYSAPVI-HCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQT-LATIGYMAP 214
P I H DLK N+L+ N ++D G+A K ++ ++ T + T YM P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 215 EYGREGRVSTN------GDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPI--- 265
E E + D+YSFG++L E ++ E L Y +L+P
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWE--VARRCVSGGIVEEYQLPY--HDLVPSDPS 271
Query: 266 --SVMEIVDANLLSREDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRD 323
+ EIV L + + ++C+ + L EC + R+ A + L K+ +
Sbjct: 272 YEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331
Query: 324 S 324
S
Sbjct: 332 S 332
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 25/218 (11%)
Query: 45 FSENNL-----IGRGSFGSVYKARI-----QDG-MEVAVKVFHLQCGGVFK-SFDVECEV 92
F NNL +G G+FG V +A +D ++VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 93 MKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLY---------SSNCVLDIFQR 142
M + +H N++ ++ C++ ++ EY +G L L L++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 162
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
L+ VA + +L S IH D+ NVLL + VA + DFG+A+ + + +
Sbjct: 163 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 219
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+S+GI+L E F+
Sbjct: 220 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
+G GSFG V A G +VA+K+ + L + + E ++ +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCL----YSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
+ D +V+EY + + + S FQ+ + +A+EY H
Sbjct: 81 VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ------IISAVEYCH---RH 131
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
++H DLKP N+LLD+++ ++DFG++ ++T + K+ + + Y APE G++
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKT---SCGSPNYAAPEV-ISGKL 187
Query: 223 STNG--DVYSFGIMLMETFTKKKPTD 246
DV+S G++L ++ P D
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 24/229 (10%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCGGVFKSFDV-ECEVMKS 95
++ + F +L+G G++G V A + E VA+K +F + E +++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 96 IRHRNLIKIISTCSNDDFKAL----VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAA 151
+H N+I I + D F+ +++ + L + + + D Q +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYF--IYQTLR 123
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL--TGEDQSKSQTQT---- 205
A++ LH + VIH DLKPSN+L++ N + DFG+A+++ + D S+ Q
Sbjct: 124 AVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 206 --LATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAG 251
+AT Y APE + S DV+S G +L E F ++ IF G
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR----PIFPG 225
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG--GVFKSFDVECEVMK--- 94
AT + IG G++G+VYKAR G VA+K + G G+ S E +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 95 SIRHRNLIKIISTC----SNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
+ H N+++++ C ++ + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L++LH ++H DLKP N+L+ L+DFG+A++ + + + + T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTL 175
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKK 243
Y APE + +T D++S G + E F +K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DG------------------MEVAVKVFHLQC---GGV 82
F E LIG G FG V+KA+ + DG ++ K+ H+ G
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGC 73
Query: 83 FKSFDVECEV----MKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC-VL 137
+ FD + E ++S + S+ S + +E+ G+LE+ + L
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 138 DIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 197
D L + + ++Y+H S +IH DLKPSN+ L D + DFG+ L +
Sbjct: 134 DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG 190
Query: 198 QSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
+ +T++ T+ YM+PE D+Y+ G++L E
Sbjct: 191 K---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 108/239 (45%), Gaps = 41/239 (17%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPH------------GSLEKCLYSSNCVLD 138
+++ RH N+I I ND +A +E M L KC + SN +
Sbjct: 77 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHIC 131
Query: 139 IFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-D 197
F + + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 132 YF-----LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 198 QSKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 238
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 38/278 (13%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRHRNLI 102
+G G+FGSV Y+ R + ++VA+KV G K+ E ++M + + ++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-IDVAIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
++I C + LV+E G L K L + + ++ V+ ++YL
Sbjct: 400 RLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EK 455
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQ-SKSQTQTLATIGYMAPEYGREGR 221
+H +L NVLL + A +SDFG++K L +D +++ + + APE +
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 222 VSTNGDVYSFGIMLMETFT-KKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSRED 280
S+ DV+S+G+ + E + +KP K+ E VM ++ +
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--------------VMAFIE------QG 555
Query: 281 KHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
K +C ++ L +C + E R + + R+
Sbjct: 556 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVA+K+ L + K F E +MK + H N++K+
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ L++EY G + L + + + R + +A++Y H ++H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVH 134
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREGRV-ST 224
DLK N+LLD +M ++DFG + T + T + Y APE + +
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFSNEFT----VGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 225 NGDVYSFGIMLMETFTKKKPTD 246
DV+S G++L + P D
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRNLIKIISTC 108
+GRGSFG V++ Q G + AVK L+ VF++ ++ C + S R ++ +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR---IVPLYGAV 154
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ + +E + GSL + + C+ + + L + LEYLH S ++H D
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGD 210
Query: 169 LKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQSKS---QTQTLATIGYMAPEYGREGRVST 224
+K NVLL D A L DFG A L + KS T +MAPE
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDA 270
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
DV+S M++ P + F G + LK
Sbjct: 271 KVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 302
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCG--GVFKSFDVECEVMK--- 94
AT + IG G++G+VYKAR G VA+K + G G+ S E +++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 95 SIRHRNLIKIISTC----SNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
+ H N+++++ C ++ + K LV E++ + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L++LH ++H DLKP N+L+ L+DFG+A++ + + + + T+
Sbjct: 122 LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTL 175
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKK 243
Y APE + +T D++S G + E F +K
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 209
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--------FKSFDVECEVMK 94
D F + ++GRG FG V+ + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI---DVAA 151
+ R ++ + LV+ M G + +Y+ + FQ + + +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIG 210
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ ++K T G
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---GTPG 354
Query: 211 YMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+MAPE G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + + VA+K + V + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 192
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 193 SDVWMFGVCMWE 204
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--------FKSFDVECEVMK 94
D F + ++GRG FG V+ + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI---DVAA 151
+ R ++ + LV+ M G + +Y+ + FQ + + +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIG 210
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ ++K T G
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---GTPG 354
Query: 211 YMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+MAPE G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--------FKSFDVECEVMK 94
D F + ++GRG FG V+ + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI---DVAA 151
+ R ++ + LV+ M G + +Y+ + FQ + + +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIG 210
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ ++K T G
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---GTPG 354
Query: 211 YMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+MAPE G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFD-VECEVMKSIRHRNLIKIISTC 108
+GRGSFG V++ + Q G + AVK L+ VF+ + V C + S R ++ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPR---IVPLYGAV 119
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ + +E + GSL + + C+ + + L + LEYLH + ++H D
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGD 175
Query: 169 LKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQSKS---QTQTLATIGYMAPEYGREGRVST 224
+K NVLL D A L DFG A L + KS T +MAPE
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
D++S M++ P + F G + LK
Sbjct: 236 KVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 50/222 (22%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVK---------------------VFHLQCGGV 82
F E LIG G FG V+KA+ + DG +K V + G
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 83 FKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNC-VLDIFQ 141
+ FD + E R+ K + + +E+ G+LE+ + LD
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCL---------FIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 142 RLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKS 201
L + + ++Y+H S +I+ DLKPSN+ L D + DFG L+T
Sbjct: 124 ALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFG---LVTSLKNDGK 177
Query: 202 QTQTLATIGYMAPE------YGREGRVSTNGDVYSFGIMLME 237
+ ++ T+ YM+PE YG+E D+Y+ G++L E
Sbjct: 178 RXRSKGTLRYMSPEQISSQDYGKE------VDLYALGLILAE 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFD-VECEVMKSIRHRNLIKIISTC 108
+GRGSFG V++ + Q G + AVK L+ VF+ + V C + S R ++ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPR---IVPLYGAV 135
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ + +E + GSL + + C+ + + L + LEYLH + ++H D
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGD 191
Query: 169 LKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQSKS---QTQTLATIGYMAPEYGREGRVST 224
+K NVLL D A L DFG A L + KS T +MAPE
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 251
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
D++S M++ P + F G + LK
Sbjct: 252 KVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 13/228 (5%)
Query: 13 KRGKQLPNDANMPPVATWRRFSYLELFQATDGF---SENNLIGRGSFGSVYK-ARIQDGM 68
KR L D PP R + A + F S+ ++G G FG V+K G+
Sbjct: 57 KRTSALAVDIPAPPAPFDHRIVTAKQ-GAVNSFYTVSKTEILGGGRFGQVHKCEETATGL 115
Query: 69 EVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEK 128
++A K+ + + E VM + H NLI++ + + LV+EY+ G L
Sbjct: 116 KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD 175
Query: 129 CLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL--DDNMVAHLSD 186
+ + L + M + + ++H Y ++H DLKP N+L D + D
Sbjct: 176 RIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIID 232
Query: 187 FGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 234
FG+A+ ++ K T ++APE VS D++S G++
Sbjct: 233 FGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + + VA+K + V + F E M+ H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 106 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 161
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 162 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 220
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 221 SDVWMFGVCMWE 232
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV--AVKVFHLQCGGVFKSFDVECEVMKSIRHRNLI 102
++ N IGRGS+G V K +Q G + A K F E E+MKS+ H N+I
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 103 KIISTCSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ T ++ LV+E G L E+ ++ V IM DV +A+ Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH---K 124
Query: 162 APVIHCDLKPSNVL-LDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
V H DLKP N L L D+ + L DFG+A K + T Y++P+
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---PGKMMRTKVGTPYYVSPQV-L 180
Query: 219 EGRVSTNGDVYSFGIML 235
EG D +S G+M+
Sbjct: 181 EGLYGPECDEWSAGVMM 197
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + + VA+K + V + F E M+ H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 75 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 130
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 131 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 189
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 190 SDVWMFGVCMWE 201
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 30/198 (15%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQC---GGVFK--SFDVECEVMKSIRHRNLIKI 104
++G G+F V+ + + K+F L+C F+ S + E V+K I+H N++ +
Sbjct: 16 VLGSGAFSEVFLVK----QRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 105 ISTCSNDDFKALVLEYMPHGS-----LEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
+ LV++ + G LE+ +Y+ + Q+ V +A++YLH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ------VLSAVKYLH-- 123
Query: 160 YSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
++H DLKP N+L ++N ++DFG++K+ +Q+ + T GY+APE
Sbjct: 124 -ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEV 178
Query: 217 GREGRVSTNGDVYSFGIM 234
+ S D +S G++
Sbjct: 179 LAQKPYSKAVDCWSIGVI 196
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFD-VECEVMKSIRHRNLIKIISTC 108
+GRGSFG V++ + Q G + AVK L+ VF+ + V C + S R ++ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLE---VFRVEELVACAGLSSPR---IVPLYGAV 133
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ + +E + GSL + + C+ + + L + LEYLH + ++H D
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPED-RALYYLGQALEGLEYLH---TRRILHGD 189
Query: 169 LKPSNVLL-DDNMVAHLSDFGIAKLLTGEDQSKS---QTQTLATIGYMAPEYGREGRVST 224
+K NVLL D A L DFG A L + KS T +MAPE
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 249
Query: 225 NGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
D++S M++ P + F G + LK
Sbjct: 250 KVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 16/197 (8%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV--AVKVFHLQCGGVFKSFDVECEVMKSIRHRNLI 102
++ N IGRGS+G V K +Q G + A K F E E+MKS+ H N+I
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 103 KIISTCSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
++ T ++ LV+E G L E+ ++ V IM DV +A+ Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCH---K 141
Query: 162 APVIHCDLKPSNVL-LDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
V H DLKP N L L D+ + L DFG+A K + T Y++P+
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---PGKMMRTKVGTPYYVSPQV-L 197
Query: 219 EGRVSTNGDVYSFGIML 235
EG D +S G+M+
Sbjct: 198 EGLYGPECDEWSAGVMM 214
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + + VA+K + V + F E M+ H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 80 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 135
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 136 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 194
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 195 SDVWMFGVCMWE 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGV--------FKSFDVECEVMK 94
D F + ++GRG FG V+ + M+ K++ + ++ VE +++
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQ----MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI---DVAA 151
+ R ++ + LV+ M G + +Y+ + FQ + + +
Sbjct: 241 KVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVS 300
Query: 152 ALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIG 210
LE+LH +I+ DLKP NVLLDD+ +SD G+A +L G+ ++K T G
Sbjct: 301 GLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA---GTPG 354
Query: 211 YMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+MAPE G E S D ++ G+ L E + P
Sbjct: 355 FMAPELLLGEEYDFSV--DYFALGVTLYEMIAARGP 388
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + + VA+K + V + F E M+ H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 81 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 136
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 137 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 195
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 196 SDVWMFGVCMWE 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 12/164 (7%)
Query: 77 LQCGGVFKSFDVECEVMKSIRHRNLIKIISTC--SNDDFKALVLEYMPHGSLEKCLYSSN 134
+Q G + E ++K + H N++K++ N+D +V E + G + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 135 CVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 194
D Q D+ +EYLH+ +IH D+KPSN+L+ ++ ++DFG++
Sbjct: 134 LSED--QARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 195 GEDQSKSQTQTLATIGYMAPEYGREGRVSTNG---DVYSFGIML 235
G D S T+ T +MAPE E R +G DV++ G+ L
Sbjct: 189 GSDALLS--NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 50 LIGR-GSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
+IG G FG VYKA+ ++ + A KV + + + VE +++ S H N++K++
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
++ +++E+ G+++ + L Q + AL YLH +IH
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY-----GREGRV 222
DLK N+L + L+DFG++ T + + + T +MAPE ++
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNT-RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 223 STNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
DV+S GI L+E + P ++ + LK
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T TL T Y+APE
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEII 196
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 197 LSKGYNKAVDWWALGVLIYE 216
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + + VA+K + V + F E M+ H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 83 GVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFV 138
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ N L DFG+++ + K+ L I +MAPE R ++
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 197
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 198 SDVWMFGVCMWE 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIIS-- 106
+G+G +G V++ + G VAVK+F + +S+ E E+ ++ RH N++ I+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 107 -TCSNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH---FGYS 161
T N + L+ Y HGSL L L+ L + + A L +LH FG
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQ--TLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 162 A-PVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQ-SKSQTQTLATIGYMAPEYG 217
P I H D K NVL+ N+ ++D G+A + + G D + T YMAPE
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 218 REGRVSTN-------GDVYSFGIMLME 237
E ++ T+ D+++FG++L E
Sbjct: 190 DE-QIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
IG+G FG V++ + + G EVAVK+F + +S+ E E+ +++ RH N++ I+
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF----GY 160
+ D+ LV +Y HGSL Y + + + + + + A+ L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 161 SAPVI-HCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQ-SKSQTQTLATIGYMAPEY- 216
P I H DLK N+L+ N ++D G+A + + D + + T YMAPE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 217 -----GREGRVSTNGDVYSFGIMLME 237
+ D+Y+ G++ E
Sbjct: 186 DDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 31/224 (13%)
Query: 45 FSENNL-----IGRGSFGSVYKARI-----QDG-MEVAVKVFHLQCGGVFK-SFDVECEV 92
F NNL +G G+FG V +A +D ++VAVK+ K + E ++
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 102
Query: 93 MKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL---------YSSNCVLDIFQR 142
M + +H N++ ++ C++ ++ EY +G L L YS N + ++
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 143 L------NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 196
L + VA + +L S IH D+ NVLL + VA + DFG+A+ + +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 219
Query: 197 DQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ + +MAPE + + DV+S+GI+L E F+
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
IG+G FG V++ + + G EVAVK+F + +S+ E E+ +++ RH N++ I+
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF----GY 160
+ D+ LV +Y HGSL Y + + + + + + A+ L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 161 SAPVI-HCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQ-SKSQTQTLATIGYMAPEY- 216
P I H DLK N+L+ N ++D G+A + + D + + T YMAPE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 217 -----GREGRVSTNGDVYSFGIMLME 237
+ D+Y+ G++ E
Sbjct: 185 DDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
IG+G FG V++ + + G EVAVK+F + +S+ E E+ +++ RH N++ I+
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF----GY 160
+ D+ LV +Y HGSL Y + + + + + + A+ L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 161 SAPVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL--------ATIGY 211
P I H DLK N+L+ N ++D G+A + S T T+ T Y
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV------RHDSATDTIDIAPNHRVGTKRY 181
Query: 212 MAPEY------GREGRVSTNGDVYSFGIMLME 237
MAPE + D+Y+ G++ E
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVECEVMK------S 95
+ F + ++G+GSFG V+ A + + A+K L+ V DVEC +++ +
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
H L + T + V+EY+ G L + S + D+ + ++ L++
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQF 134
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL-LTGEDQSKSQTQTLATIGYMAP 214
LH S +++ DLK N+LLD + ++DFG+ K + G+ ++ + T Y+AP
Sbjct: 135 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTPDYIAP 188
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
E + + + D +SFG++L E + P
Sbjct: 189 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F IG GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EYMP G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F IG GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EYMP G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 30/219 (13%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRNLIKIISTC 108
+GRGSFG V++ Q G + AVK L+ VF++ ++ C + S R ++ +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFRAEELMACAGLTSPR---IVPLYGAV 135
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ + +E + GSL + + C+ + + L + LEYLH S ++H D
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGD 191
Query: 169 LKPSNVLL-DDNMVAHLSDFGIA----------KLLTGEDQSKSQTQTLATIGYMAPEYG 217
+K NVLL D A L DFG A LLTG+ ++T +MAPE
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET-------HMAPEVV 244
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
DV+S M++ P + F G + LK
Sbjct: 245 LGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLK 283
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
IG+G FG V++ + + G EVAVK+F + +S+ E E+ +++ RH N++ I+
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF----GY 160
+ D+ LV +Y HGSL Y + + + + + + A+ L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 161 SAPVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL--------ATIGY 211
P I H DLK N+L+ N ++D G+A + S T T+ T Y
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV------RHDSATDTIDIAPNHRVGTKRY 204
Query: 212 MAPEY------GREGRVSTNGDVYSFGIMLME 237
MAPE + D+Y+ G++ E
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
IG+G FG V++ + + G EVAVK+F + +S+ E E+ +++ RH N++ I+
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF----GY 160
+ D+ LV +Y HGSL Y + + + + + + A+ L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 161 SAPVI-HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL--------ATIGY 211
P I H DLK N+L+ N ++D G+A + S T T+ T Y
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAV------RHDSATDTIDIAPNHRVGTKRY 217
Query: 212 MAPEY------GREGRVSTNGDVYSFGIMLME 237
MAPE + D+Y+ G++ E
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 25/206 (12%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI--RHRNLIKIISTC 108
IG+G FG V++ + + G EVAVK+F + +S+ E E+ +++ RH N++ I+
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 109 SNDDFKA----LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF----GY 160
+ D+ LV +Y HGSL Y + + + + + + A+ L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 161 SAPVI-HCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQ-SKSQTQTLATIGYMAPEY- 216
P I H DLK N+L+ N ++D G+A + + D + + T YMAPE
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 217 -----GREGRVSTNGDVYSFGIMLME 237
+ D+Y+ G++ E
Sbjct: 191 DDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 74
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ + RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 75 KILLAFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 125
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 22/224 (9%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVA+K+ L + K F E +MK + H N++K+
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ L++EY G + L + + + R + +A++Y H ++H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVH 137
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD +M ++DFG + T + + Y APE + +
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPE 194
Query: 226 GDVYSFGIMLMETFTKKKPTD---------KIFAGEMTLKYWVS 260
DV+S G++L + P D ++ G+ + +++S
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS 238
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 50 LIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKS--------FDVECEVMKSIRHRNL 101
+IGRG+FG V R + + KV+ ++ F+ F E ++M +
Sbjct: 82 VIGRGAFGEVQLVR----HKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV 137
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+++ +D + +V+EYMP G L L S+ V + + + +V AL+ +H S
Sbjct: 138 VQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKF-YTAEVVLALDAIH---S 192
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE----YG 217
+IH D+KP N+LLD + L+DFG + T + T Y++PE G
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AVGTPDYISPEVLKSQG 251
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKP 244
+G D +S G+ L E P
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 42 TDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
TD + +G+G+F V + +I G E A K+ + + + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYS----SNCVLDIFQRLNIMIDV 149
N++++ + S + F LV + + G L + YS S+C+ I + +N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
+ H ++H DLKP N+LL L+DFG+A + G+ Q +
Sbjct: 118 -----HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFA 167
Query: 207 ATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T GY++PE R+ D+++ G++L
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T TL T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVECEV 92
F +++ IG G++G V A VA+K F Q C + E ++
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQI 94
Query: 93 MKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN-----IMI 147
+ RH N+I I +A+ Y+ +E LY +L Q N +
Sbjct: 95 LLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK---LLKSQQLSNDHICYFLY 151
Query: 148 DVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQSKSQTQTL 206
+ L+Y+H SA V+H DLKPSN+L++ + DFG+A++ E D + T+ +
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXV 208
Query: 207 ATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 254
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 92
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M L L + D+++ L
Sbjct: 93 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYLVTHLMGA----DLYKLLKTQHLSN 143
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 254
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 42 TDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
TD + +G+G+F V + +I G E A K+ + + + + E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYS----SNCVLDIFQRLNIMIDV 149
N++++ + S + F LV + + G L + YS S+C+ I + +N
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN----- 117
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
+ H ++H DLKP N+LL L+DFG+A + G+ Q +
Sbjct: 118 -----HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQ--AWFGFA 167
Query: 207 ATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T GY++PE R+ D+++ G++L
Sbjct: 168 GTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 73 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 123
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 234
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 25/254 (9%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRHRNLIKII- 105
IGRGSF +VYK + V V LQ + KS F E E +K ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 106 ---STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
ST LV E G+L+ L V I + + L++LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-VXKIKVLRSWCRQILKGLQFLH-TRTP 150
Query: 163 PVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
P+IH DLK N+ + + + D G+A L ++ + T + APE E +
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE-K 205
Query: 222 VSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPIS--------VMEIVDA 273
+ DVY+FG +E T + P + + S + P S V EI++
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
Query: 274 NLLSREDKHFAAKE 287
+ +D+ ++ K+
Sbjct: 266 CIRQNKDERYSIKD 279
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 43 DGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + + +G G+ G V+K + G+ +A K+ HL+ ++ + E +V+
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK 142
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YM+PE +
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMSPERLQG 196
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKP 244
S D++S G+ L+E + P
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRN 100
D F + +G G+ G V K + + G+ +A K+ HL+ ++ + E +V+
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD-IFQRLNIMIDVAAALEYLHFG 159
++ +D ++ +E+M GSL++ L + + + I +++I V L YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREK 133
Query: 160 YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ ++H D+KPSN+L++ L DFG+ +G+ + T YMAPE +
Sbjct: 134 HQ--IMHRDVKPSNILVNSRGEIKLCDFGV----SGQLIDSMANSFVGTRSYMAPERLQG 187
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEM 253
S D++S G+ L+E + P A E+
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYPIPPPDAKEL 221
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 73 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 123
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 234
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 110/238 (46%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 74
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ + RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 75 KILLAFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 125
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 236
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 73 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 123
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 234
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
+D + +G+G+F V + G+E A K+ + + F+ + E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + + F LV + + G L+ + + + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 159 GYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
+S ++H +LKP N+LL L+DFG+A + + S++ T GY++PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 176
Query: 216 YGREGRVSTNGDVYSFGIML 235
++ S D+++ G++L
Sbjct: 177 VLKKDPYSKPVDIWACGVIL 196
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 77 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 127
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 238
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 98/208 (47%), Gaps = 17/208 (8%)
Query: 38 LFQATDGFSEN----NLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVEC 90
+ A+ FS+N +G+G+F V + G+E A K+ + + F+ + E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVA 150
+ + ++H N++++ + + F LV + + G L+ + + + +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQ 135
Query: 151 AALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
LE + + +S ++H +LKP N+LL L+DFG+A + + S++
Sbjct: 136 QILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAG 192
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIML 235
T GY++PE ++ S D+++ G++L
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 32/224 (14%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRH- 98
A+D F E ++G+G+FG V KAR D A+K + E ++ S+ H
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQ 62
Query: 99 ------------RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
RN +K ++ + +EY + +L ++S N + +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK-------LLTGEDQ- 198
+ AL Y+H S +IH DLKP N+ +D++ + DFG+AK +L + Q
Sbjct: 123 RQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 199 ----SKSQTQTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLME 237
S + T + T Y+A E G + D+YS GI+ E
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
+D + +G+G+F V + G+E A K+ + + F+ + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + + F LV + + G L+ + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 159 GYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
+S ++H +LKP N+LL L+DFG+A + + S++ T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 177
Query: 216 YGREGRVSTNGDVYSFGIML 235
++ S D+++ G++L
Sbjct: 178 VLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
+D + +G+G+F V + G+E A K+ + + F+ + E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + + F LV + + G L+ + + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGE----LFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 159 GYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
+S ++H +LKP N+LL L+DFG+A + + S++ T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV---NDSEAWHGFAGTPGYLSPE 177
Query: 216 YGREGRVSTNGDVYSFGIML 235
++ S D+++ G++L
Sbjct: 178 VLKKDPYSKPVDIWACGVIL 197
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 73 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 123
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + M VA+K + V + F E M+ H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 78 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 133
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ L DFG+++ + K+ L I +MAPE R ++
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 192
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 193 SDVWMFGVCMWE 204
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 49 NLIGRGSFGSVYKARIQDG--------MEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRN 100
++G G++G V+ R G M+V K +Q + E +V++ IR
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 101 LIKIISTCSNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMI---DVAAALEYL 156
+ + + K L+L+Y+ G L ++ + F + I ++ ALE+L
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
H +I+ D+K N+LLD N L+DFG++K D+++ TI YMAP+
Sbjct: 176 H---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDI 231
Query: 217 GREGRVSTNG--DVYSFGIMLMETFTKKKP 244
R G + D +S G+++ E T P
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 74
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 75 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 125
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 126 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 70
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 71 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 121
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 122 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 70
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 71 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 121
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 122 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 232
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 10/208 (4%)
Query: 41 ATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRH 98
++ F + +G G++ +VYK G+ VA+K L G + E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMID---VAAALEY 155
N++++ ++ LV E+M L+K + S V + + L + + L+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFM-DNDLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
L F + ++H DLKP N+L++ L DFG+A+ + S + T+ Y AP+
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFS--SEVVTLWYRAPD 178
Query: 216 YGREGRV-STNGDVYSFGIMLMETFTKK 242
R ST+ D++S G +L E T K
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 77
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 78 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 128
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 129 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 239
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 78
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 79 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 129
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 130 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 240
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 69
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 70 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 120
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 121 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 231
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 77 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 127
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 238
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 31/234 (13%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK-VFHLQCGGVFKSFDVECEVMK 94
++F ++ + IG G++G V A + + VA+K + + + E +++
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILL 80
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN---------- 144
RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 81 RFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSNDHIC 131
Query: 145 -IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQSKSQ 202
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D +
Sbjct: 132 YFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL 188
Query: 203 TQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 189 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 238
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 29/225 (12%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRHRNLIK-- 103
IG GS+G K R + DG + K L G + ++ E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 104 --IISTCSNDDFKALVLEYMPHGSLEKCLYSSN---CVLDIFQRLNIMIDVAAALEYLHF 158
II + + +V+EY G L + LD L +M + AL+ H
Sbjct: 72 DRIIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 159 GYSA--PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
V+H DLKP+NV LD L DFG+A++L D S ++T + T YM+PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKT-FVGTPYYMSPEQ 187
Query: 217 GREGRVSTNGDVYSFGIMLME---------TFTKKKPTDKIFAGE 252
+ D++S G +L E F++K+ KI G+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
TD + IG+G+F V + ++ G E A K+ + + + + E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
N++++ + S + F LV + + G L+ + + + + LE +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 159 GYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
+ V+H DLKP N+LL L+DFG+A + G+ Q + T GY++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ--AWFGFAGTPGYLSPE 176
Query: 216 YGREGRVSTNGDVYSFGIML 235
R+ D+++ G++L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 92
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 93 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 143
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 144 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 254
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 80
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 81 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 131
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 132 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 242
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EI 72
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 73 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 123
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 124 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 51 IGRGSFGSV----YKARIQDGMEVAVKVF-HLQCGGVFKSFDVECEVMKSIRHRNLIKII 105
IG G FG V Y + M VA+K + V + F E M+ H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ + +++E G L L LD+ + ++ AL YL S +
Sbjct: 458 GVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFV 513
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+ NVL+ L DFG+++ + K+ L I +MAPE R ++
Sbjct: 514 HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSA 572
Query: 226 GDVYSFGIMLME 237
DV+ FG+ + E
Sbjct: 573 SDVWMFGVCMWE 584
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRHRNLIK-- 103
IG GS+G K R + DG + K L G + ++ E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 104 --IISTCSNDDFKALVLEYMPHGSLEKCLYSSN---CVLDIFQRLNIMIDVAAALEYLHF 158
II + + +V+EY G L + LD L +M + AL+ H
Sbjct: 72 DRIIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 159 GYSA--PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT-GEDQSKSQTQTLATIGYMAPE 215
V+H DLKP+NV LD L DFG+A++L ED +K + + T YM+PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK---EFVGTPYYMSPE 186
Query: 216 YGREGRVSTNGDVYSFGIMLME---------TFTKKKPTDKIFAGE 252
+ D++S G +L E F++K+ KI G+
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVA---VKVFHLQCGGVFKSFDVECEV---- 92
AT + IG G++G+VYKAR G VA V+V + GG EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 93 -MKSIRHRNLIKIISTC----SNDDFK-ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
+++ H N+++++ C ++ + K LV E++ + L ++M
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
L++LH ++H DLKP N+L+ L+DFG+A++ + + + T +
Sbjct: 127 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVV 180
Query: 207 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKK 243
T+ Y APE + +T D++S G + E F +K
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKP 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVECEVMK------S 95
+ F + ++G+GSFG V+ A + + A+K L+ V DVEC +++ +
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA--LKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
H L + T + V+EY+ G L + S + D+ + ++ L++
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQF 133
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL-LTGEDQSKSQTQTLATIGYMAP 214
LH S +++ DLK N+LLD + ++DFG+ K + G+ ++ T Y+AP
Sbjct: 134 LH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NXFCGTPDYIAP 187
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
E + + + D +SFG++L E + P
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F IG GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA++ F Q C + E
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EI 76
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 77 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 127
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ T+ +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 238
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A ++ G VAVK L+ + E +M+ +H N++++ ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 88 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 142
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE D++
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GIM++E + P Y+ N P+ M+++ NL R
Sbjct: 201 SLGIMVIEMVDGEPP------------YF--NEPPLKAMKMIRDNLPPRLKNLHKVSPSL 246
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
F+ L V QR A E++
Sbjct: 247 KGFLDRL----LVRDPAQRATAAELL 268
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A ++ G VAVK L+ + E +M+ +H N++++ ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 99 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 153
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE D++
Sbjct: 154 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GIM++E + P Y+ N P+ M+++ NL R
Sbjct: 212 SLGIMVIEMVDGEPP------------YF--NEPPLKAMKMIRDNLPPRLKNLHKVSPSL 257
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
F+ L V QR A E++
Sbjct: 258 KGFLDRL----LVRDPAQRATAAELL 279
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 151
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 203
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 204 LSKGYNKAVDWWALGVLIYE 223
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A ++ G VAVK L+ + E +M+ +H N++++ ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 97 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 151
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE D++
Sbjct: 152 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GIM++E + P Y+ N P+ M+++ NL R
Sbjct: 210 SLGIMVIEMVDGEPP------------YF--NEPPLKAMKMIRDNLPPRLKNLHKVSPSL 255
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
F+ L V QR A E++
Sbjct: 256 KGFLDRL----LVRDPAQRATAAELL 277
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A ++ G VAVK L+ + E +M+ +H N++++ ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 92 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 146
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GIM++E + P Y+ N P+ M+++ NL R
Sbjct: 205 SLGIMVIEMVDGEPP------------YF--NEPPLKAMKMIRDNLPPRLKNLHKVSPSL 250
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
F+ L V QR A E++
Sbjct: 251 KGFLDRL----LVRDPAQRATAAELL 272
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQC-GGVFKSFDVECEVMKSIRHRN 100
D + +++G G+F V A + + VA+K + G S + E V+ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSS-NCVLDIFQRLNIMIDVAAALE 154
++ + + L+++ + G L EK Y+ + IFQ L+ A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 155 YLHFGYSAPVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
YLH ++H DLKP N+L LD++ +SDFG++K+ ED + T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 212 MAPEYGREGRVSTNGDVYSFGIM 234
+APE + S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQC-GGVFKSFDVECEVMKSIRHRN 100
D + +++G G+F V A + + VA+K + G S + E V+ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSS-NCVLDIFQRLNIMIDVAAALE 154
++ + + L+++ + G L EK Y+ + IFQ L+ A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 155 YLHFGYSAPVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
YLH ++H DLKP N+L LD++ +SDFG++K+ ED + T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 212 MAPEYGREGRVSTNGDVYSFGIM 234
+APE + S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 29/214 (13%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 101 LIKIISTCSNDDFKALVL-EYMPHGSLEKCL---------YSSNCVLDIFQRLNIMI--- 147
++ ++ C+ +V+ E+ G+L L Y + F L +I
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYS 154
Query: 148 -DVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 155 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 207 ATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 151
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 203
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 204 LSKGYNKAVDWWALGVLIYE 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMK----- 94
D F ++G+GSFG V AR+++ G AVKV L+ + + DVEC + +
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILS 78
Query: 95 -SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
+ H L ++ D V+E++ G L + S + R ++ +AL
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISAL 137
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
+LH +I+ DLK NVLLD L+DFG+ K G + T Y+A
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIA 192
Query: 214 PEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
PE +E D ++ G++L E P
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQC-GGVFKSFDVECEVMKSIRHRN 100
D + +++G G+F V A + + VA+K + G S + E V+ I+H N
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN 77
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSS-NCVLDIFQRLNIMIDVAAALE 154
++ + + L+++ + G L EK Y+ + IFQ L+ A++
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD-------AVK 130
Query: 155 YLHFGYSAPVIHCDLKPSNVL---LDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
YLH ++H DLKP N+L LD++ +SDFG++K+ ED + T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGY 184
Query: 212 MAPEYGREGRVSTNGDVYSFGIM 234
+APE + S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 76
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 77 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 127
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 128 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ + +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 108/238 (45%), Gaps = 39/238 (16%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVK---VFHLQ--CGGVFKSFDVEC 90
++F ++ + IG G++G V A + + VA+K F Q C + E
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EI 77
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------ 144
+++ RH N+I I ND +A +E M + + L + D+++ L
Sbjct: 78 KILLRFRHENIIGI-----NDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSN 128
Query: 145 -----IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE-DQ 198
+ + L+Y+H SA V+H DLKPSN+LL+ + DFG+A++ + D
Sbjct: 129 DHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ + +AT Y APE + T D++S G +L E + + IF G+ L
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR----PIFPGKHYL 239
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A ++ G VAVK L+ + E +M+ +H N++++ ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 142 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 196
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GIM++E + P Y+ N P+ M+++ NL R
Sbjct: 255 SLGIMVIEMVDGEPP------------YF--NEPPLKAMKMIRDNLPPRLKNLHKVSPSL 300
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
F+ L V QR A E++
Sbjct: 301 KGFLDRL----LVRDPAQRATAAELL 322
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 26/222 (11%)
Query: 24 MPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQC-GG 81
MP R+ E + D + +++G G+F V A + + VA+K + G
Sbjct: 1 MPGAVEGPRWKQAEDIR--DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG 58
Query: 82 VFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSS-NC 135
S + E V+ I+H N++ + + L+++ + G L EK Y+ +
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA 118
Query: 136 VLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVL---LDDNMVAHLSDFGIAKL 192
IFQ L+ A++YLH ++H DLKP N+L LD++ +SDFG++K+
Sbjct: 119 SRLIFQVLD-------AVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
Query: 193 LTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 234
ED + T GY+APE + S D +S G++
Sbjct: 169 ---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 42 TDGFSENNLIGRGSFGSVY--KARIQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
+D + ++G+GSFG V K +I G E AVKV ++ +S E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H N++K+ + + LV E G L + S ++ I+ V + + Y+
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 157 HFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H ++H DLKP N+LL+ + + DFG++ T + SK + T Y+A
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 202
Query: 214 PEYGREGRVSTNGDVYSFGIML 235
PE G DV+S G++L
Sbjct: 203 PEV-LHGTYDEKCDVWSTGVIL 223
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 12/219 (5%)
Query: 32 RFSYLELFQAT-DGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDV-- 88
++ +LE T + F + ++G+G FG V +++ ++ + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 89 --ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNI 145
E ++++ + R ++ + D LVL M G L+ +Y + +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 146 MIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
++ LE LH +++ DLKP N+LLDD+ +SD G+A + + ++
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGR 345
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T+GYMAPE + R + + D ++ G +L E + P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 99/219 (45%), Gaps = 12/219 (5%)
Query: 32 RFSYLELFQAT-DGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDV-- 88
++ +LE T + F + ++G+G FG V +++ ++ + + +
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 89 --ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNI 145
E ++++ + R ++ + D LVL M G L+ +Y + +
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 146 MIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
++ LE LH +++ DLKP N+LLDD+ +SD G+A + + ++
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGR 345
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T+GYMAPE + R + + D ++ G +L E + P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 51 IGRGSFGSVYKAR-IQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSIRHRNLIKIIS 106
IG+G+F V AR I G EVAVK+ L + K F E + K + H N++K+
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 107 TCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ LV EY G + L + + R + +A++Y H + ++H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVH 136
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV-STN 225
DLK N+LLD + ++DFG + T ++ + Y APE + +
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPE 193
Query: 226 GDVYSFGIMLMETFTKKKPTD 246
DV+S G++L + P D
Sbjct: 194 VDVWSLGVILYTLVSGSLPFD 214
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 101 LIKIISTCSNDDFKALVL-EYMPHGSLEKCLYSSNC-----------VLDIFQRLNIMID 148
++ ++ C+ +V+ E+ G+L L S L + +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQ 152
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 29/225 (12%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKS----FDVECEVMKSIRHRNLIK-- 103
IG GS+G K R + DG + K L G + ++ E +++ ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWK--ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 104 --IISTCSNDDFKALVLEYMPHGSLEKCLYSSN---CVLDIFQRLNIMIDVAAALEYLHF 158
II + + +V+EY G L + LD L +M + AL+ H
Sbjct: 72 DRIIDRTNTTLY--IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
Query: 159 GYSA--PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
V+H DLKP+NV LD L DFG+A++L D S ++ + T YM+PE
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKA-FVGTPYYMSPEQ 187
Query: 217 GREGRVSTNGDVYSFGIMLME---------TFTKKKPTDKIFAGE 252
+ D++S G +L E F++K+ KI G+
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 28/217 (12%)
Query: 48 NNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRHRNLIK 103
++++G+G+ +V++ R + G A+KVF+ + DV E EV+K + H+N++K
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 104 I--ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQR--LNIMIDVAAALEYLHFG 159
+ I + K L++E+ P GSL L + + + L ++ DV + +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-- 129
Query: 160 YSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
++H ++KP N++ D V L+DFG A+ L ++Q S T Y+ P+
Sbjct: 130 -ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS---LYGTEEYLHPD 185
Query: 216 -YGR-------EGRVSTNGDVYSFGIMLMETFTKKKP 244
Y R + + D++S G+ T P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG+AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+P G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 231
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 41 ATDGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRH- 98
A+D F E ++G+G+FG V KAR D A+K + E ++ S+ H
Sbjct: 5 ASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQ 62
Query: 99 ------------RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
RN +K + + EY + +L ++S N + +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK-------LLTGEDQ- 198
+ AL Y+H S +IH +LKP N+ +D++ + DFG+AK +L + Q
Sbjct: 123 RQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 199 ----SKSQTQTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLME 237
S + T + T Y+A E G + D YS GI+ E
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 38/231 (16%)
Query: 45 FSENNL-----IGRGSFGSVYKARI-----QDG-MEVAVKVFHLQCGGVFK-SFDVECEV 92
F NNL +G G+FG V +A +D ++VAVK+ K + E ++
Sbjct: 28 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKI 87
Query: 93 MKSI-RHRNLIKIISTCSNDDFKALVLEYMPHGSL--------EKCLYSS---------- 133
M + +H N++ ++ C++ ++ EY +G L E L S
Sbjct: 88 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGL 147
Query: 134 ----NCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 189
L++ L+ VA + +L S IH D+ NVLL + VA + DFG+
Sbjct: 148 DKEDGRPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGL 204
Query: 190 AKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
A+ + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 205 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 26/266 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
IG GS G V A ++ G VAVK L+ + E +M+ +H N++++ ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 110 NDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDL 169
D +V+E++ G+L + ++ ++ Q + + V AL LH + VIH D+
Sbjct: 219 VGDELWVVMEFLEGGALTDIV--THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDI 273
Query: 170 KPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVY 229
K ++LL + LSDFG ++ E + + T +MAPE D++
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
Query: 230 SFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDKHFAAKEQC 289
S GIM++E + P Y+ N P+ M+++ NL R
Sbjct: 332 SLGIMVIEMVDGEPP------------YF--NEPPLKAMKMIRDNLPPRLKNLHKVSPSL 377
Query: 290 VSFVFNLAMECTVESAEQRINAKEIV 315
F+ L V QR A E++
Sbjct: 378 KGFLDRL----LVRDPAQRATAAELL 399
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 42 TDGFSENNLIGRGSFGSVY--KARIQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
+D + ++G+GSFG V K +I G E AVKV ++ +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H N++K+ + + LV E G L + S ++ I+ V + + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 157 HFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H ++H DLKP N+LL+ + + DFG++ T + SK + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 196
Query: 214 PEYGREGRVSTNGDVYSFGIML 235
PE G DV+S G++L
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVIL 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG+AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRH 98
TD + +G+G+F V + + E A K+ + + + + E + + ++H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYS----SNCVLDIFQRLNIMIDV 149
N++++ + S + F LV + + G L + YS S+C+ I + +N +
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI--- 146
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
+ ++H DLKP N+LL L+DFG+A + GE Q +
Sbjct: 147 ----------HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ--AWFGFA 194
Query: 207 ATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T GY++PE R+ D+++ G++L
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 27/212 (12%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 101 LIKIISTCSNDDFKALVL-EYMPHGSLEKCLYSSNCVL----DIFQRLNIM-------ID 148
++ ++ C+ +V+ E+ G+L L S D+++ +
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQ 152
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQ----CGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G++G V A R+ + VAVK+ ++ C K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ + L LEY G L + + + + A + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 225 NG-DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 141
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQ----CGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G++G V A R+ + VAVK+ ++ C K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ + L LEY G L + + + + A + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 225 NG-DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 141
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQ----CGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G++G V A R+ + VAVK+ ++ C K E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 69
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ + L LEY G L + + + + A + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 125
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 225 NG-DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 15/204 (7%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQ----CGGVFKSFDVECEVMKSIRHRNLIKI 104
+G G++G V A R+ + VAVK+ ++ C K E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKK---EICINKMLNHENVVKF 70
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
+ + L LEY G L + + + + A + YLH +
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGI 126
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 225 NG-DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 127
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQ 208
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E + +++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +VLEY P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 150
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 42 TDGFSENNLIGRGSFGSVY--KARIQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
+D + ++G+GSFG V K +I G E AVKV ++ +S E +++K +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H N++K+ + + LV E G L + S ++ I+ V + + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 157 HFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H ++H DLKP N+LL+ + + DFG++ T + SK + T Y+A
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 219
Query: 214 PEYGREGRVSTNGDVYSFGIML 235
PE G DV+S G++L
Sbjct: 220 PEV-LHGTYDEKCDVWSTGVIL 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 37/286 (12%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH--LQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G+V A + G +VA+K + Q K E ++K +RH N+I ++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 108 CSND----DFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ D DF LV+ +M L K + D Q L + + L Y+H +
Sbjct: 93 FTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL--VYQMLKGLRYIH---A 146
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ-TLATIGYMAPEYGREG 220
A +IH DLKP N+ ++++ + DFG+A+ Q+ S+ + T Y APE
Sbjct: 147 AGIIHRDLKPGNLAVNEDCELKILDFGLAR------QADSEMXGXVVTRWYRAPEVILNW 200
Query: 221 -RVSTNGDVYSFGIMLMETFTKK---KPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN-- 274
R + D++S G ++ E T K K +D + + +K V+ P ++ + ++
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK--VTGTPPAEFVQRLQSDEA 258
Query: 275 ------LLSREDKHFAAKEQCVS-FVFNLAMECTVESAEQRINAKE 313
L E K FA+ S NL + V AEQR+ A E
Sbjct: 259 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 304
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 48 NNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRHRNLIK 103
++++G+G+ +V++ R + G A+KVF+ + DV E EV+K + H+N++K
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNIS--FLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 104 I--ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQR--LNIMIDVAAALEYLHFG 159
+ I + K L++E+ P GSL L + + + L ++ DV + +L
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR-- 129
Query: 160 YSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
++H ++KP N++ D V L+DFG A+ L ++Q T Y+ P+
Sbjct: 130 -ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGTEEYLHPD 185
Query: 216 -YGR-------EGRVSTNGDVYSFGIMLMETFTKKKP 244
Y R + + D++S G+ T P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 17/202 (8%)
Query: 42 TDGFSENNLIGRGSFGSVY--KARIQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
+D + ++G+GSFG V K +I G E AVKV ++ +S E +++K +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H N++K+ + + LV E G L + S ++ I+ V + + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 157 HFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H ++H DLKP N+LL+ + + DFG++ T + SK + T Y+A
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKDKIGTAYYIA 220
Query: 214 PEYGREGRVSTNGDVYSFGIML 235
PE G DV+S G++L
Sbjct: 221 PEV-LHGTYDEKCDVWSTGVIL 241
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQ 210
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 25/247 (10%)
Query: 50 LIGRGSFGSVYKARIQDG--------MEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNL 101
++G+G +G V++ R G M+V K ++ E +++ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ +I L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---Q 139
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREG 220
+I+ DLKP N++L+ L+DFG+ K + T T TI YMAPE
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI---HDGTVTHTFCGTIEYMAPEILMRS 196
Query: 221 RVSTNGDVYSFGIMLMETFT---------KKKPTDKIFAGEMTLKYWVSNLLPISVMEIV 271
+ D +S G ++ + T +KK DKI ++ L +++ + +++
Sbjct: 197 GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 272 DANLLSR 278
N SR
Sbjct: 257 KRNAASR 263
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLE--HL 152
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 153 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-ECEVMKSIRHRNLI 102
F +GRG FG V++A+ + D A+K L + + + E + + + H ++
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 103 KIISTCSNDDFKALVLEYMPHGSLE-----------KCLYSSNCVLDIFQR---LNIMID 148
+ + + + P L K + C ++ +R L+I +
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKS------- 201
+A A+E+LH S ++H DLKPSN+ + V + DFG+ + +++ ++
Sbjct: 127 IAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 202 ---QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
T + T YM+PE S D++S G++L E
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 51 IGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRHRNLIKIIST 107
+G+G+F V + ++ G E A K+ + + + + E + + ++H N++++ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
S + L+ + + G L + + + + + LE + + V+H
Sbjct: 90 ISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 168 DLKPSNVLLDDNM---VAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
DLKP N+LL + L+DFG+A + GE Q + T GY++PE R+
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGK 203
Query: 225 NGDVYSFGIML 235
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 101 LIKIISTCSNDDFKALVL-EYMPHGSLEKCLYSSNCVL-------DIFQRLNIM------ 146
++ ++ C+ +V+ E+ G+L L S D+++ +
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICY 153
Query: 147 -IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT 205
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 154 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 150
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 32/164 (19%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIML 235
S +TL T Y+APE V T G D +S G++L
Sbjct: 171 ---SLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVIL 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 141
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 141
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 32/164 (19%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIML 235
S +TL T Y+APE V T G D +S G++L
Sbjct: 171 ---SLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVIL 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ + L LEY G L ++ QR + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 127
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 227 -DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 188 VDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 11/202 (5%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 108 CSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIH 166
+ + L LEY G L ++ QR + A + YLH + H
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITH 128
Query: 167 CDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 227 -DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 VDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 19/206 (9%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI------RHRNLI 102
+G G++G V A R+ + VAVK+ ++ ++ D + K I H N++
Sbjct: 15 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMK-----RAVDCPENIKKEICINAMLNHENVV 68
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
K + + L LEY G L + + + + A + YLH
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
+ H D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 223 STNG-DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 44/291 (15%)
Query: 50 LIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI-RHRNLIKII-- 105
L+G G++G VYK R ++ G A+KV + G + E ++K HRN+
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDV-TGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 106 ----STCSNDDFKALVLEYMPHGSLEKCLYSSNC-VLDIFQRLNIMIDVAAALEYLHFGY 160
+ DD LV+E+ GS+ + ++ L I ++ L +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH--- 146
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT-LATIGYMAPEY--- 216
VIH D+K NVLL +N L DFG++ L D++ + T + T +MAPE
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 217 --GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDAN 274
+ D++S GI +E P + ++ P+ + ++ N
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPP--------------LCDMHPMRALFLIPRN 249
Query: 275 LLSR-EDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRLLKIRDS 324
R + K ++ K Q SF+ + C V++ QR ++++ IRD
Sbjct: 250 PAPRLKSKKWSKKFQ--SFIES----CLVKNHSQRPATEQLMKHPF-IRDQ 293
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 32/164 (19%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 121 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 169
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIML 235
S +TL T Y+APE V T G D +S G++L
Sbjct: 170 ---SLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVIL 208
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKS 95
D + +G G F V K R + G E A K + G + + E +++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
IRH N+I + N L+LE + G L L + + + + + + Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 130
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAH----LSDFGIAKLLTGEDQSKSQTQTLATIGY 211
LH S + H DLKP N++L D V + L DFGIA + ++ K+ T +
Sbjct: 131 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEF 184
Query: 212 MAPEYGREGRVSTNGDVYSFGIM 234
+APE + D++S G++
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 150
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 32/173 (18%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 261 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GE- 308
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLMETFTKKKP 244
S +TL T Y+APE V T G D +S G++L + P
Sbjct: 309 --TSLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLA-TIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T LA T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 32/164 (19%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 122 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GET 170
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIML 235
S +TL T Y+APE V T G D +S G++L
Sbjct: 171 ---SLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVIL 209
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 50/238 (21%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIR----------HR 99
+G+G++G V+K+ + G VAVK +F +F + ++ R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-------KIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 100 NLIKIIST--CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
N++ +++ ND LV +YM L + ++ +L+ + ++ + ++YLH
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH 126
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG-------------------EDQ 198
S ++H D+KPSN+LL+ ++DFG+++ +D
Sbjct: 127 ---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 199 SKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
T +AT Y APE T G D++S G +L E K IF G T+
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK----PIFPGSSTM 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVFHLQCGGVF---KSFDVECEVMKSIRHR-N 100
+GRG+FG V +A + VAVK+ L+ G ++ E +++ I H N
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 101 LIKIISTCSNDDFKALVL------------------EYMPHGSLEKCLYSSNCVLDIFQR 142
++ ++ C+ +V+ E++P+ + LY L+
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE--HL 187
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 188 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 32/165 (19%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 247 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GE- 294
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIMLM 236
S +TL T Y+APE V T G D +S G++L
Sbjct: 295 --TSLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVILF 335
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 83/164 (50%), Gaps = 32/164 (19%)
Query: 87 DVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL------EKCLYSSNCVLDIF 140
+ E E++K + H +IKI + +D+ +VLE M G L K L + C L +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGED 197
Q L A++YLH +IH DLKP NVLL +++ + ++DFG +K+L GE
Sbjct: 128 QML-------LAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GE- 175
Query: 198 QSKSQTQTL-ATIGYMAPEYGREGRVSTNG-----DVYSFGIML 235
S +TL T Y+APE V T G D +S G++L
Sbjct: 176 --TSLMRTLCGTPTYLAPEVLVS--VGTAGYNRAVDCWSLGVIL 215
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRH 98
F +G G+F V A + K+F ++C G S + E V++ I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAE----EKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLDIFQRLNIMIDVAAAL 153
N++ + + + LV++ + G L EK Y+ + ++ V A+
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAV 133
Query: 154 EYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH ++H DLKP N+L D+ +SDFG++K+ E + + T G
Sbjct: 134 YYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPG 187
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
Y+APE + S D +S G++
Sbjct: 188 YVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 51 IGRGSFGSV---YKARIQDGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKII 105
+G G++GSV Y AR++ +VAVK + + E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 106 ----STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
S +DF + L G+ + S + D + ++ + L+Y+H S
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG- 220
A +IH DLKPSNV ++++ + DFG+A+ + T +AT Y APE
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 221 RVSTNGDVYSFGIMLMETFTKK 242
+ D++S G ++ E K
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 145
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D+ ++DFG AK + G +T L T Y+APE
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 197
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 198 LSKGYNKAVDWWALGVLIYE 217
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKS 95
D + +G G F V K R + G E A K + G + + E +++
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
IRH N+I + N L+LE + G L L + + + + + + Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 123
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAH----LSDFGIAKLLTGEDQSKSQTQTLATIGY 211
LH S + H DLKP N++L D V + L DFGIA + ++ K+ T +
Sbjct: 124 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEF 177
Query: 212 MAPEYGREGRVSTNGDVYSFGIM 234
+APE + D++S G++
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVI 200
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMK-SIRHRNLIK 103
F +++G G+ G++ + D +VAVK +C F D E ++++ S H N+I+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIR 82
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
T + F+ + +E + +L++ + + + + ++ + L +LH S
Sbjct: 83 YFCTEKDRQFQYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLN 138
Query: 164 VIHCDLKPSNVLLD-----DNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIGYMAPE 215
++H DLKP N+L+ + A +SDFG+ KL G ++ T G++APE
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L K+ + ++ +V+EY P G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKS 95
D + +G G F V K R + G E A K + G + + E +++
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
IRH N+I + N L+LE + G L L + + + + + + Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTED-EATQFLKQILDGVHY 144
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAH----LSDFGIAKLLTGEDQSKSQTQTLATIGY 211
LH S + H DLKP N++L D V + L DFGIA + ++ K+ T +
Sbjct: 145 LH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN---IFGTPEF 198
Query: 212 MAPEYGREGRVSTNGDVYSFGIM 234
+APE + D++S G++
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVI 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 179
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G T TL T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ATWTLCGTPEYLAPEII 231
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 17/202 (8%)
Query: 42 TDGFSENNLIGRGSFGSVY--KARIQDGMEVAVKVF---HLQCGGVFKSFDVECEVMKSI 96
+D + ++G+GSFG V K +I G E AVKV ++ +S E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
H N+ K+ + + LV E G L + S ++ I+ V + + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 157 HFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H ++H DLKP N+LL+ + + DFG++ T + SK + T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKDKIGTAYYIA 196
Query: 214 PEYGREGRVSTNGDVYSFGIML 235
PE G DV+S G++L
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVIL 217
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL +N V + DFG+A+ + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLPISVM 268
+ +MAPE + ST DV+S+G++L E F+ G P +
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGS-----------PYPGV 305
Query: 269 EIVDANLLS--REDKHFAAKEQCVSFVFNLAMECTVESAEQRINAKEIVTRL 318
++ D + S RE A E ++ + ++C ++R E+V +L
Sbjct: 306 QM-DEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 153
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 205
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 206 LSKGYNKAVDWWALGVLIYE 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 24/208 (11%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVK--VFHLQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
IG+G+FG V+KAR + G +VA+K + + G + E ++++ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 108 CSN-----DDFKA---LVLEYMPH---GSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
C + KA LV ++ H G L L L +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNGL 138
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTGEDQSKSQTQTLATIGYMAP 214
++ + ++H D+K +NVL+ + V L+DFG+A+ L Q + T+ Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 215 EYGREGR-VSTNGDVYSFGIMLMETFTK 241
E R D++ G ++ E +T+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKAR-IQDGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + IG G++GSV A + G+ VAVK + K E ++K
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATR 191
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 TDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNL 101
+D F + +GRG+ VY+ + Q G + + L+ K E V+ + H N+
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 102 IKIISTCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
IK+ +LVLE + G L EK YS D ++ + A+ YL
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAYL 164
Query: 157 HFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
H ++H DLKP N+L + ++DFG++K++ E Q +T T GY A
Sbjct: 165 H---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYCA 218
Query: 214 PEYGREGRVSTNGDVYSFGIM 234
PE R D++S GI+
Sbjct: 219 PEILRGCAYGPEVDMWSVGII 239
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 26/227 (11%)
Query: 24 MPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGV 82
M P T F YL+L +G+G+FG V R + G A+K+ + +
Sbjct: 3 MDPKVTMNDFDYLKL------------LGKGTFGKVILVREKATGRYYAMKILRKEV--I 48
Query: 83 FKSFDV-----ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVL 137
+V E V+++ RH L + D V+EY G L L
Sbjct: 49 IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT 108
Query: 138 DIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGED 197
+ R ++ +ALEYLH S V++ D+K N++LD + ++DFG+ K G
Sbjct: 109 EERARF-YGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGIS 162
Query: 198 QSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T Y+APE + D + G+++ E + P
Sbjct: 163 DGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 9/201 (4%)
Query: 51 IGRGSFGSVYKA--RIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G+ G V A R+ + VAVK+ ++ ++ E + K + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ + L LEY G L + + + + A + YLH + H
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 168 DLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG- 226
D+KP N+LLD+ +SDFG+A + ++ + + T+ Y+APE +
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 227 DVYSFGIMLMETFTKKKPTDK 247
DV+S GI+L + P D+
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQ 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 106/249 (42%), Gaps = 29/249 (11%)
Query: 50 LIGRGSFGSVYKARIQDG--------MEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNL 101
++G+G +G V++ R G M+V K ++ E +++ ++H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ +I L+LEY+ G L L ++ + +++ AL +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---Q 139
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQT---LATIGYMAPEYGR 218
+I+ DLKP N++L+ L+DFG+ K + T T TI YMAPE
Sbjct: 140 KGIIYRDLKPENIMLNHQGHVKLTDFGLCK-----ESIHDGTVTHXFCGTIEYMAPEILM 194
Query: 219 EGRVSTNGDVYSFGIMLMETFT---------KKKPTDKIFAGEMTLKYWVSNLLPISVME 269
+ D +S G ++ + T +KK DKI ++ L +++ + +
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKK 254
Query: 270 IVDANLLSR 278
++ N SR
Sbjct: 255 LLKRNAASR 263
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 179
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 180 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 231
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 51 IGRGSFGSVYK-ARIQDGMEVAVK-----VFHLQCGGVFKSFDVECEVMKSIRHRNLIKI 104
IGRG++GSV K G +AVK V + + DV VM+S +++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV---VMRSSDCPYIVQF 86
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLD--IFQRLNIMIDVAAALEYLHFGYSA 162
+ + +E M S +K VLD I + + I +A H +
Sbjct: 87 YGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL 145
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY-----G 217
+IH D+KPSN+LLD + L DFGI+ L S ++T+ YMAPE
Sbjct: 146 KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSAS 202
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKPTDK 247
R+G DV+S GI L E T + P K
Sbjct: 203 RQG-YDVRSDVWSLGITLYELATGRFPYPK 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLXGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 51 IGRGSFGSV---YKARIQDGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKII 105
+G G++GSV Y AR++ +VAVK + + E ++K ++H N+I ++
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 106 ----STCSNDDFKALVLEYMPHGS----LEKC--LYSSNCVLDIFQRLNIMIDVAAALEY 155
S +DF + L G+ + KC L + ++Q L L+Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR-------GLKY 146
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
+H SA +IH DLKPSNV ++++ + DFG+A+ + T +AT Y APE
Sbjct: 147 IH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----QADEEMTGYVATRWYRAPE 198
Query: 216 YGREG-RVSTNGDVYSFGIMLMETFTKK 242
+ D++S G ++ E K
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 211
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 33/208 (15%)
Query: 51 IGRGSFGSV---YKARIQDGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKII 105
+G G++GSV Y AR++ +VAVK + + E ++K ++H N+I ++
Sbjct: 28 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 106 ----STCSNDDFKALVLEYMPHGS----LEKC--LYSSNCVLDIFQRLNIMIDVAAALEY 155
S +DF + L G+ + KC L + ++Q L L+Y
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLR-------GLKY 138
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE 215
+H SA +IH DLKPSNV ++++ + DFG+A+ + T +AT Y APE
Sbjct: 139 IH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----QADEEMTGYVATRWYRAPE 190
Query: 216 YGREG-RVSTNGDVYSFGIMLMETFTKK 242
+ D++S G ++ E K
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 22/224 (9%)
Query: 41 ATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFHLQCG--GVFKSFDVECEVMKSIR 97
+ D + +G G++G VYKA E VA+K L+ GV + E ++K ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
HRN+I++ S ++ L+ EY L+K + + D+ R+ I + + ++
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYA-ENDLKKYMDKNP---DVSMRV-IKSFLYQLINGVN 146
Query: 158 FGYSAPVIHCDLKPSNVLL-----DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
F +S +H DLKP N+LL + V + DFG+A+ + T + T+ Y
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG--IPIRQFTHEIITLWYR 204
Query: 213 APEYGREGR-VSTNGDVYS----FGIMLMET--FTKKKPTDKIF 249
PE R ST+ D++S + MLM+T F D++F
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGXVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 95 SIRHRNLIKIISTCS--------NDDFKALVLEYMPHGSLEKC--LYSSNCVLDIFQRLN 144
++H N+I ++ + ND + L ++ KC L + I+Q L
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T
Sbjct: 144 -------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 205 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
+AT Y APE + D++S G ++ E T +
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATR 191
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 145
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 146 LRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTGYVATR 197
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVK--VFHLQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
IG+G+FG V+KAR + G +VA+K + + G + E ++++ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 108 CSNDDFKA--------LVLEYMPH---GSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
C LV ++ H G L L L +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNGL 138
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTGEDQSKSQTQTLATIGYMAP 214
++ + ++H D+K +NVL+ + V L+DFG+A+ L Q + T+ Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 215 EYGREGR-VSTNGDVYSFGIMLMETFTK 241
E R D++ G ++ E +T+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVK--VFHLQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
IG+G+FG V+KAR + G +VA+K + + G + E ++++ ++H N++ +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 108 CSNDDFKA--------LVLEYMPH---GSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
C LV ++ H G L L L +R+ M+ L L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNGL 137
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTGEDQSKSQTQTLATIGYMAP 214
++ + ++H D+K +NVL+ + V L+DFG+A+ L Q + T+ Y P
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 215 EYGREGR-VSTNGDVYSFGIMLMETFTK 241
E R D++ G ++ E +T+
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 51 IGRGSFGSVYK--ARIQDGMEVAVKVFHLQCG-GVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++ +VYK +++ D + VA+K L+ G + E ++K ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 108 CSNDDFKALVLEYMPHGSLEKCL--YSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+ LV EY L+K L Y +C +I N+ + + L L + + V+
Sbjct: 69 IHTEKSLTLVFEY-----LDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE--YGREGRVS 223
H DLKP N+L+++ L+DFG+A+ +K+ + T+ Y P+ G S
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVVTLWYRPPDILLGSTD-YS 179
Query: 224 TNGDVYSFGIMLMETFTKK 242
T D++ G + E T +
Sbjct: 180 TQIDMWGVGCIFYEMATGR 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMID 148
E ++KS+ H N+IK+ + + LV E+ G L + + + + D NIM
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQ 154
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLTGEDQSKSQTQT 205
+ + + YLH ++H D+KP N+LL++ + + DFG++ + + + + +
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR--- 208
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIML 235
L T Y+APE ++ + + DV+S G+++
Sbjct: 209 LGTAYYIAPEVLKK-KYNEKCDVWSCGVIM 237
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVK--VFHLQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
IG+G+FG V+KAR + G +VA+K + + G + E ++++ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 108 CSNDDFKA--------LVLEYMPH---GSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYL 156
C LV ++ H G L L L +R+ M+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNGL 138
Query: 157 HFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL--LTGEDQSKSQTQTLATIGYMAP 214
++ + ++H D+K +NVL+ + V L+DFG+A+ L Q + T+ Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 215 EYGREGR-VSTNGDVYSFGIMLMETFTK 241
E R D++ G ++ E +T+
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 10/204 (4%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRN 100
+ +G+G F Y+ D EV A KV L + E + KS+ + +
Sbjct: 28 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
++ +DDF +VLE SL + V + R M ++YLH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH--- 143
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
+ VIH DLK N+ L+D+M + DFG+A + + + K T Y+APE +
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK--DLCGTPNYIAPEVLCKK 201
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
S D++S G +L K P
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV + ++ G+++AVK + K E ++K
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK 105
Query: 95 SIRHRNLIKII----STCSNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 163
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 164 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 215
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATR 193
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATR 193
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 131
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 132 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 183
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 73
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 74 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 131
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 132 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 183
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 95 SIRHRNLIKIISTCS--------NDDFKALVLEYMPHGSLEKC--LYSSNCVLDIFQRLN 144
++H N+I ++ + ND + L ++ KC L + I+Q L
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T
Sbjct: 133 -------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 177
Query: 205 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
+AT Y APE + D++S G ++ E T +
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + S D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+ + E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 18/213 (8%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKARIQDG--MEVAVKVFHLQCGGVFKSFDVECEVMKSI 96
Q TDG+ IG GS+ SV K I ME AVK+ + ++ +++
Sbjct: 18 IQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYG 73
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
+H N+I + + + +V E M G L +K L + ++ + +EY
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEY 131
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
LH + V+H DLKPSN+L D + DFG AK L E+ T +
Sbjct: 132 LH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANF 186
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+APE D++S G++L T P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 12/205 (5%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRN 100
+ +G+G F Y+ D EV A KV L + E + KS+ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
++ +DDF +VLE SL + V + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH--- 159
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGRE 219
+ VIH DLK N+ L+D+M + DFG+A + + + K +TL T Y+APE +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK---KTLCGTPNYIAPEVLCK 216
Query: 220 GRVSTNGDVYSFGIMLMETFTKKKP 244
S D++S G +L K P
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 33/231 (14%)
Query: 49 NLIGRGSFGSVYKA-RIQDGMEVAVKV-----FHLQCGGVFKSFDVECEVMKSIRHRNLI 102
+IG+G+F V + + G + AVK+ F G + E + ++H +++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA---------L 153
+++ T S+D +V E+M L +I +R + + A L
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADL---------CFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 154 EYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG 210
E L + + +IH D+KP NVLL +++ L DFG+A L GE + + + T
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL-GESGLVAGGR-VGTPH 198
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP----TDKIFAGEMTLKY 257
+MAPE + DV+ G++L + P +++F G + KY
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY 249
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATR 188
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 74
Query: 95 SIRHRNLIKIISTCS--------NDDFKALVLEYMPHGSLEKC--LYSSNCVLDIFQRLN 144
++H N+I ++ + ND + L ++ KC L + I+Q L
Sbjct: 75 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 134
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T
Sbjct: 135 -------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 179
Query: 205 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
+AT Y APE + D++S G ++ E T +
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 83
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 84 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 141
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 142 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 193
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
L+I I +A A+E+LH S ++H DLKPSN+ + V + DFG L+T DQ + +
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFG---LVTAMDQDEEE 220
Query: 203 TQTLATIG-------------YMAPEYGREGRVSTNGDVYSFGIMLME 237
L + YM+PE S D++S G++L E
Sbjct: 221 QTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 191
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 75
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 76 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 133
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 134 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 185
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 81
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 82 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 139
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 140 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 191
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSIRH 98
F L+G+G+FG V R + G A+K+ + + +V E V+++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L + D V+EY G L L + R ++ +ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S V++ D+K N++LD + ++DFG+ K G + T Y+APE
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLE 178
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKP 244
+ D + G+++ E + P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 140
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTGYVATR 192
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 140
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 192
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 188
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 87
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 88 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 145
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 146 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 197
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 146
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 198
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 88
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 146
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 198
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 188
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 10/204 (4%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRN 100
+ +G+G F Y+ D EV A KV L + E + KS+ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
++ +DDF +VLE SL + V + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH--- 159
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
+ VIH DLK N+ L+D+M + DFG+A + + + K T Y+APE +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK--DLCGTPNYIAPEVLCKK 217
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
S D++S G +L K P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 78
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 79 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 136
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 137 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 188
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 95 SIRHRNLIKIISTCS--------NDDFKALVLEYMPHGSLEKC--LYSSNCVLDIFQRLN 144
++H N+I ++ + ND + L ++ KC L + I+Q L
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T
Sbjct: 160 -------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 204
Query: 205 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
+AT Y APE + D++S G ++ E T +
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSIRH 98
F L+G+G+FG V R + G A+K+ + + +V E V+++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L + D V+EY G L L + R ++ +ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S V++ D+K N++LD + ++DFG+ K G + T Y+APE
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLE 178
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKP 244
+ D + G+++ E + P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 10/204 (4%)
Query: 45 FSENNLIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRN 100
+ +G+G F Y+ D EV A KV L + E + KS+ + +
Sbjct: 44 YMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
++ +DDF +VLE SL + V + R M ++YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH--- 159
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
+ VIH DLK N+ L+D+M + DFG+A + + + K T Y+APE +
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK--XLCGTPNYIAPEVLCKK 217
Query: 221 RVSTNGDVYSFGIMLMETFTKKKP 244
S D++S G +L K P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 154
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 155 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 206
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 153
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 154 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 205
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 140
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 192
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSIRH 98
F L+G+G+FG V R + G A+K+ + + +V E V+++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L + D V+EY G L L + R ++ +ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S V++ D+K N++LD + ++DFG+ K G + T Y+APE
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLE 178
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKP 244
+ D + G+++ E + P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK 88
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 89 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 146
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 147 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 198
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSIRH 98
F L+G+G+FG V R + G A+K+ + + +V E V+++ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRH 67
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L + D V+EY G L L + R ++ +ALEYLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 125
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S V++ D+K N++LD + ++DFG+ K G + T Y+APE
Sbjct: 126 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLE 181
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKP 244
+ D + G+++ E + P
Sbjct: 182 DNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ +
Sbjct: 211 LSKGYNKAVDWWALGVLIYQ 230
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSIRH 98
F L+G+G+FG V R + G A+K+ + + +V E V+++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L + D V+EY G L L + R ++ +ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S V++ D+K N++LD + ++DFG+ K G + T Y+APE
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAPEVLE 178
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKP 244
+ D + G+++ E + P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 45 FSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV-----ECEVMKSIRH 98
F L+G+G+FG V R + G A+K+ + + +V E V+++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRH 64
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L + D V+EY G L L + R ++ +ALEYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH- 122
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S V++ D+K N++LD + ++DFG+ K G + T Y+APE
Sbjct: 123 --SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAPEVLE 178
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKP 244
+ D + G+++ E + P
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+++D ++DFG AK + G +T L T Y+APE
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 ISKGYNKAVDWWALGVLIYE 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 50 LIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKIIS 106
++G+GSFG V K + + E AVKV + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 107 TCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ +V E G L ++ +S + I ++ V + + Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH---K 139
Query: 162 APVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
++H DLKP N+LL+ + + DFG++ Q+ + T Y+APE R
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLR 196
Query: 219 EGRVSTNGDVYSFGIML 235
G DV+S G++L
Sbjct: 197 -GTYDEKCDVWSAGVIL 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + + D Q L + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFL--IYQI 130
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 182
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 93/236 (39%), Gaps = 40/236 (16%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+GRG++G V K R H+ G + + V + R L+ + +
Sbjct: 59 LGRGAYGVVEKMR------------HVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 106
Query: 111 DDFKALVLEY---MPHGSLEKCLYSSNCVLDIFQRL--------------NIMIDVAAAL 153
D V Y G + C+ + LD F + I + + AL
Sbjct: 107 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 166
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
E+LH S VIH D+KPSNVL++ + DFGI+ L S ++T YMA
Sbjct: 167 EHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMA 221
Query: 214 -----PEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVSNLLP 264
PE ++G S D++S GI ++E + P D LK V P
Sbjct: 222 PERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP 276
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 24/197 (12%)
Query: 50 LIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKIIS 106
++G+GSFG V K + + E AVKV + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 107 TCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ +V E G L ++ +S + I ++ V + + Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH---K 139
Query: 162 APVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
++H DLKP N+LL+ + + DFG++ T Q+ + T Y+APE R
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 219 EGRVSTNGDVYSFGIML 235
G DV+S G++L
Sbjct: 197 -GTYDEKCDVWSAGVIL 212
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + D+G+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 95 SIRHRNLIKIISTCS--------NDDFKALVLEYMPHGSLEKC--LYSSNCVLDIFQRLN 144
++H N+I ++ + ND + L ++ KC L + I+Q L
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T
Sbjct: 133 -------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 177
Query: 205 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
+AT Y APE + D++S G ++ E T +
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 24/197 (12%)
Query: 50 LIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKIIS 106
++G+GSFG V K + + E AVKV + + + E E++K + H N++K+
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 107 TCSNDDFKALVLEYMPHGSL-----EKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ +V E G L ++ +S + I ++ V + + Y+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQ------VFSGITYMH---K 139
Query: 162 APVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
++H DLKP N+LL+ + + DFG++ T Q+ + T Y+APE R
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 219 EGRVSTNGDVYSFGIML 235
G DV+S G++L
Sbjct: 197 -GTYDEKCDVWSAGVIL 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 144 NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQT 203
+ + + AL YL + VIH D+KPSN+LLD+ L DFGI+ L +D++K ++
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRS 184
Query: 204 QTLATIGYMAPEY-----GREGRVSTNGDVYSFGIMLMETFTKKKP 244
A YMAPE + DV+S GI L+E T + P
Sbjct: 185 AGCAA--YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-- 93
L + +D + IG G+FG R + E+ V V +++ G +V+ E++
Sbjct: 12 LPIMHDSDRYELVKDIGAGNFGVARLMRDKQANEL-VAVKYIERGEKIDE-NVKREIINH 69
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----YSSNCVLDIFQRLNIMID 148
+S+RH N+++ A+V+EY G L + + +S + FQ+L +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL--SDFGIAKLLTGEDQSKSQTQTL 206
A A++ V H DLK N LLD + L +DFG +K Q KS +
Sbjct: 130 YAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AV 177
Query: 207 ATIGYMAPEY----GREGRVSTNGDVYSFGIML 235
T Y+APE +G+V+ DV+S G+ L
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 51 IGRGSFGSVYK-ARIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVMKSIRHRNLIKIIST 107
+G+G+F V + ++ G E A + + + + + E + + ++H N++++ +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
S + L+ + + G L+ + + + + LE + + V+H
Sbjct: 79 ISEEGHHYLIFDLVTGGE----LFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHR 134
Query: 168 DLKPSNVLLDDNM---VAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
+LKP N+LL + L+DFG+A + GE Q + T GY++PE R+
Sbjct: 135 NLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGK 192
Query: 225 NGDVYSFGIML 235
D+++ G++L
Sbjct: 193 PVDLWACGVIL 203
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 154
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 155 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 206
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPAII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 95
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 96 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 153
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 154 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 205
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 9/195 (4%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNL 101
D + + +G G+FG V++ + G A K ++ E + M +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ + +D+ ++ E+M G L + + + + + + M V L ++H
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 167
Query: 162 APVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+H DLKP N++ L DFG+ L D +S T T + APE
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEG 224
Query: 220 GRVSTNGDVYSFGIM 234
V D++S G++
Sbjct: 225 KPVGYYTDMWSVGVL 239
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 9/195 (4%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNL 101
D + + +G G+FG V++ + G A K ++ E + M +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ + +D+ ++ E+M G L + + + + + + M V L ++H
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---E 273
Query: 162 APVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+H DLKP N++ L DFG+ L D +S T T + APE
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEG 330
Query: 220 GRVSTNGDVYSFGIM 234
V D++S G++
Sbjct: 331 KPVGYYTDMWSVGVL 345
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 82
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 83 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 140
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E T +AT
Sbjct: 141 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATR 192
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 108/248 (43%), Gaps = 29/248 (11%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-- 93
+ + +D + IG G+FG R + E+ V V +++ G +V+ E++
Sbjct: 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKEL-VAVKYIERGAAIDE-NVQREIINH 70
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAAL 153
+S+RH N+++ A+++EY G LY C F L
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGE----LYERICNAGRFSEDEARFFFQQLL 126
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGY 211
+ + +S + H DLK N LLD + L DFG +K Q KS T+ T Y
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAY 183
Query: 212 MAPE----YGREGRVSTNGDVYSFG----IMLMETFTKKKPTD-----KIFAGEMTLKYW 258
+APE +G+++ DV+S G +ML+ + + P + K +++KY
Sbjct: 184 IAPEVLLRQEYDGKIA---DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS 240
Query: 259 VSNLLPIS 266
+ + + IS
Sbjct: 241 IPDDIRIS 248
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 19/201 (9%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMKSIRHRNLIKIIST 107
+G G++GSV A + G VAVK + K E ++K ++H N+I ++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 108 C----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
S ++F + L ++ L + D Q L + + L+Y+H SA
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQILRGLKYIH---SA 154
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG-R 221
+IH DLKPSN+ ++++ + DFG+A+ E T +AT Y APE
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMH 209
Query: 222 VSTNGDVYSFGIMLMETFTKK 242
+ D++S G ++ E T +
Sbjct: 210 YNQTVDIWSVGCIMAELLTGR 230
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVEC-----EVMKSIRHRNLIK 103
+IGRG+FG V ++++ +V A+K+ L + K + C +V+ + + +
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKI--LNKWEMLKRAETACFREERDVLVNGDSKWITT 138
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ +D+ LV++Y G L L L + ++ A++ +H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLH 195
Query: 164 VIHCDLKPSNVLLDDNMVAHLSDFGIA-KLLTGEDQSKSQTQTLATIGYMAPEY-----G 217
+H D+KP N+L+D N L+DFG KL+ ED + + + T Y++PE G
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 218 REGRVSTNGDVYSFGIMLMETFTKKKP 244
+GR D +S G+ + E + P
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 24/225 (10%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI---R 97
T F E IG G FGSV+K + DG A+K G + EV +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRL---NIMIDVAAALE 154
H ++++ S + DD + EY GSL + + ++ F+ ++++ V L
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
Y+H S ++H D+KPSN+ + + + A G++ + + + IG
Sbjct: 126 YIH---SMSLVHMDIKPSNIFISRTSIPN------AASEEGDEDDWASNKVMFKIG---- 172
Query: 215 EYGREGRVST----NGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ G R+S+ GD +++ P IFA +T+
Sbjct: 173 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 217
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 24/225 (10%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI---R 97
T F E IG G FGSV+K + DG A+K G + EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRL---NIMIDVAAALE 154
H ++++ S + DD + EY GSL + + ++ F+ ++++ V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
Y+H S ++H D+KPSN+ + + + A G++ + + + IG
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSIPN------AASEEGDEDDWASNKVMFKIG---- 174
Query: 215 EYGREGRVST----NGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ G R+S+ GD +++ P IFA +T+
Sbjct: 175 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 99
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 100 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 157
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E
Sbjct: 158 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----------MX 203
Query: 210 GYMAPEYGREGRVSTNG-------DVYSFGIMLMETFTKK 242
GY+A + R + N D++S G ++ E T +
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 24/225 (10%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI---R 97
T F E IG G FGSV+K + DG A+K G + EV +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRL---NIMIDVAAALE 154
H ++++ S + DD + EY GSL + + ++ F+ ++++ V L
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
Y+H S ++H D+KPSN+ + + + A G++ + + + IG
Sbjct: 130 YIH---SMSLVHMDIKPSNIFISRTSIPN------AASEEGDEDDWASNKVMFKIG---- 176
Query: 215 EYGREGRVST----NGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ G R+S+ GD +++ P IFA +T+
Sbjct: 177 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 221
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 24/225 (10%)
Query: 42 TDGFSENNLIGRGSFGSVYK-ARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSI---R 97
T F E IG G FGSV+K + DG A+K G + EV +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRL---NIMIDVAAALE 154
H ++++ S + DD + EY GSL + + ++ F+ ++++ V L
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
Y+H S ++H D+KPSN+ + + + A G++ + + + IG
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSIPN------AASEEGDEDDWASNKVMFKIG---- 174
Query: 215 EYGREGRVST----NGDVYSFGIMLMETFTKKKPTDKIFAGEMTL 255
+ G R+S+ GD +++ P IFA +T+
Sbjct: 175 DLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTV 219
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 28/228 (12%)
Query: 41 ATDGFS---------ENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVEC 90
+TD FS + +++G G+ V + E AVK+ Q G + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 91 EVMKSIR-HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
E++ + HRN++++I +D LV E M GS+ ++ + + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDV 120
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVA--HLSDFGIAK--LLTGEDQSKSQTQ 204
A+AL++LH + + H DLKP N+L + N V+ + DFG+ L G+ S +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPE 177
Query: 205 TLATIG---YMAPE----YGREGRV-STNGDVYSFGIMLMETFTKKKP 244
L G YMAPE + E + D++S G++L + P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 30/213 (14%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-- 93
L + +D + IG G+FG R + E+ V V +++ G + +V+ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIAA-NVKREIINH 69
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----YSSNCVLDIFQRLNIMID 148
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTL 206
+ + Y H + V H DLK N LLD + L DFG +K Q KS T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 177
Query: 207 ATIGYMAPEY----GREGRVSTNGDVYSFGIML 235
T Y+APE +G+V+ DV+S G+ L
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 15/210 (7%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKIISTC 108
+G G+FG V++ + V V F + + V E +M + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKF-INTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 109 SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCD 168
+ L+LE++ G L + + + + + +N M L+++H ++H D
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLD 174
Query: 169 LKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTNG 226
+KP N++ + + + DFG+A L ++ K T AT + APE V
Sbjct: 175 IKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV---TTATAEFAAPEIVDREPVGFYT 231
Query: 227 DVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
D+++ G++ + P FAGE L+
Sbjct: 232 DMWAIGVLGYVLLSGLSP----FAGEDDLE 257
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPA 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 8 ISRYRKRGKQLPNDANMPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQDG 67
+S ++ G+Q + P A+ R +Q D + +LIG GS+G V +A D
Sbjct: 20 VSGSQQEGQQRKQHHSSKPTASMPRPH--SDWQIPDRYEIRHLIGTGSYGHVCEA--YDK 75
Query: 68 ME---VAVK----VFH--LQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSNDDFKA--- 115
+E VA+K VF + C + + E ++ + H +++K++ D +
Sbjct: 76 LEKRVVAIKKILRVFEDLIDCKRILR----EIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131
Query: 116 --LVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSN 173
+VLE S K L+ + L ++ ++ ++Y+H SA ++H DLKP+N
Sbjct: 132 LYVVLEIA--DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPAN 186
Query: 174 VLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
L++ + + DFG+A+ + + SQ
Sbjct: 187 CLVNQDCSVKVCDFGLARTVDYPENGNSQ 215
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 30/213 (14%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-- 93
L + +D + IG G+FG R + E+ V V +++ G +V+ E++
Sbjct: 11 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDE-NVKREIINH 68
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----YSSNCVLDIFQRLNIMID 148
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 123
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTL 206
+ + Y H + V H DLK N LLD + L DFG +K Q KS T+
Sbjct: 124 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TV 176
Query: 207 ATIGYMAPEY----GREGRVSTNGDVYSFGIML 235
T Y+APE +G+V+ DV+S G+ L
Sbjct: 177 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 206
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIRH 98
D F +G GSFG V + ++ G A+K+ Q K + E +++++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHF 158
L+K+ + ++ +V+EY+ G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 159 GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYG 217
S +I+ DLKP N+L+D ++DFG AK + G +T L T +APE
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEALAPEII 210
Query: 218 REGRVSTNGDVYSFGIMLME 237
+ D ++ G+++ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 90/219 (41%), Gaps = 22/219 (10%)
Query: 35 YLELFQATDGFSENNLIGRGSFGS----VYKARIQDGMEVAVKVFHLQCGGVFKSFDVEC 90
Y + +DG+ IG GS+ V+KA ME AVKV + ++
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIEI-- 73
Query: 91 EVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDV 149
+++ +H N+I + + LV E M G L +K L + ++ +
Sbjct: 74 -LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTI 130
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTGEDQSKSQTQT 205
+EYLH S V+H DLKPSN+L D + DFG AK L E+
Sbjct: 131 GKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLLMTP 185
Query: 206 LATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
T ++APE + D++S GI+L P
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + FG+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 93/222 (41%), Gaps = 23/222 (10%)
Query: 32 RFSYLELFQATDGFSENNLIGRGSFGS----VYKARIQDGMEVAVKVFHLQCGGVFKSFD 87
R S++ L +DG+ IG GS+ V+KA ME AVKV + +
Sbjct: 17 RGSHMNLV-FSDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVIDKSKRDPSEEIE 72
Query: 88 VECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIM 146
+ +++ +H N+I + + LV E M G L +K L + ++
Sbjct: 73 I---LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVL 127
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTGEDQSKSQ 202
+ +EYLH S V+H DLKPSN+L D + DFG AK L E+
Sbjct: 128 HTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN--GLL 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
T ++APE + D++S GI+L P
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 68
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 127
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 181
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 68
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 127
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 181
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 96
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 97 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 154
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E +AT
Sbjct: 155 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGXVATR 206
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + D G+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 41 ATDGFS---------ENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVEC 90
+TD FS + +++G G+ V + E AVK+ Q G + E
Sbjct: 2 STDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREV 61
Query: 91 EVMKSIR-HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
E++ + HRN++++I +D LV E M GS+ ++ + + ++ DV
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDV 120
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLS----DFGIAKLLTGEDQSKSQTQ 204
A+AL++LH + + H DLKP N+L + N V+ + D G L G+ S +
Sbjct: 121 ASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPE 177
Query: 205 TLATIG---YMAPE----YGREGRV-STNGDVYSFGIMLMETFTKKKP 244
L G YMAPE + E + D++S G++L + P
Sbjct: 178 LLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 29/219 (13%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTCS--------NDDFKALVLEYMPHGSLEKC--LYSSNCVLDIFQRLN 144
++H N+I ++ + ND + L ++ KC L + I+Q L
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQ 204
L+Y+H SA +IH DLKPSN+ ++++ + D G+A+ E T
Sbjct: 137 -------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE-----MTG 181
Query: 205 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
+AT Y APE + D++S G ++ E T +
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 72
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 73 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 130
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DFG+A+ E +AT
Sbjct: 131 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MAGFVATR 182
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFD-VECE---VMKSIRHRNLIKI 104
+IGRGS+ V R++ + A+KV + + D V+ E ++ H L+ +
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
S + V+EY+ G L + + + R +++ AL YLH +
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 142
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
I+ DLK NVLLD L+D+G+ K G + + T Y+APE R
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 200
Query: 225 NGDVYSFGIMLMETFTKKKPTD 246
+ D ++ G+++ E + P D
Sbjct: 201 SVDWWALGVLMFEMMAGRSPFD 222
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G+ VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + D G+A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFD-VECE---VMKSIRHRNLIKI 104
+IGRGS+ V R++ + A+KV + + D V+ E ++ H L+ +
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
S + V+EY+ G L + + + R +++ AL YLH +
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 127
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
I+ DLK NVLLD L+D+G+ K G + + T Y+APE R
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 185
Query: 225 NGDVYSFGIMLMETFTKKKPTD 246
+ D ++ G+++ E + P D
Sbjct: 186 SVDWWALGVLMFEMMAGRSPFD 207
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 40/218 (18%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+GRG++G V K R H+ G + + V + R L+ + +
Sbjct: 15 LGRGAYGVVEKMR------------HVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 111 DDFKALVLEY---MPHGSLEKCLYSSNCVLDIFQRL--------------NIMIDVAAAL 153
D V Y G + C+ + LD F + I + + AL
Sbjct: 63 VDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 122
Query: 154 EYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMA 213
E+LH S VIH D+KPSNVL++ + DFGI+ L +D +K YMA
Sbjct: 123 EHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCKP--YMA 177
Query: 214 -----PEYGREGRVSTNGDVYSFGIMLMETFTKKKPTD 246
PE ++G S D++S GI ++E + P D
Sbjct: 178 PERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD 214
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 200 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFD-VECE---VMKSIRHRNLIKI 104
+IGRGS+ V R++ + A+KV + + D V+ E ++ H L+ +
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
S + V+EY+ G L + + + R +++ AL YLH +
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 131
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
I+ DLK NVLLD L+D+G+ K G + + T Y+APE R
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGF 189
Query: 225 NGDVYSFGIMLMETFTKKKPTD 246
+ D ++ G+++ E + P D
Sbjct: 190 SVDWWALGVLMFEMMAGRSPFD 211
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVF----HLQCGGVFKSFDVECEVMKSI-RHR 99
+G G+FG V +A + M VAVK+ HL S E +V+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 110
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEK----------CLYSSNCVLDIFQRL------ 143
N++ ++ C+ ++ EY +G L C +S +++ +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 144 -NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 171 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + DV+S+GI L E F+
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H D+KP N+L+ + A+L DFGIA T E ++ T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ-LGNTVGTLYYXAPERFSESHATYR 215
Query: 226 GDVYSFGIMLMETFTKKKP 244
D+Y+ +L E T P
Sbjct: 216 ADIYALTCVLYECLTGSPP 234
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + T+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCS 109
+G G G V+ A D VA+K L K E ++++ + H N++K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 110 ------NDDFKAL--------VLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
DD +L V EYM L L +L+ RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVL-EQGPLLEEHARL-FMYQLLRGLKY 135
Query: 156 LHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQ-TQTLATIGYMA 213
+H SA V+H DLKP+N+ ++ +++V + DFG+A+++ K ++ L T Y +
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS 192
Query: 214 PEYGREGRVSTNG-DVYSFGIMLMETFTKKKPTDKIFAGEMTLK 256
P T D+++ G + E T K +FAG L+
Sbjct: 193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGK----TLFAGAHELE 232
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVF----HLQCGGVFKSFDVECEVMKSI-RHR 99
+G G+FG V +A + M VAVK+ HL S E +V+ + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 105
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEK----------CLYSSNCVLDIFQRL------ 143
N++ ++ C+ ++ EY +G L C +S +++ +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 144 -NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 166 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + DV+S+GI L E F+
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+LE + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 18/213 (8%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKARIQDGM--EVAVKVFHLQCGGVFKSFDVECEVMKSI 96
Q TDG+ IG GS+ SV K I E AVK+ + ++ +++
Sbjct: 18 IQFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYG 73
Query: 97 RHRNLIKIISTCSNDDFKALVLEYMPHGSL-EKCLYSSNCVLDIFQRLNIMIDVAAALEY 155
+H N+I + + + +V E G L +K L + ++ + +EY
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTVEY 131
Query: 156 LHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
LH + V+H DLKPSN+L D + DFG AK L E+ T +
Sbjct: 132 LH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN--GLLXTPCYTANF 186
Query: 212 MAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+APE D++S G++L T P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G F ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
++DF +VLE SL + L+ L + + + +YLH VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREGRVST 224
H DLK N+ L++++ + DFG+A + + + K +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSKKGHSF 196
Query: 225 NGDVYSFGIMLMETFTKKKP 244
DV+S G ++ K P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVF----HLQCGGVFKSFDVECEVMKSI-RHR 99
+G G+FG V +A + M VAVK+ HL S E +V+ + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 103
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEK----------CLYSSNCVLDIFQRL------ 143
N++ ++ C+ ++ EY +G L C +S +++ +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 144 -NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 164 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + DV+S+GI L E F+
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLAT 208
VA +E+L S IH DL N+LL + V + DFG+A+ + + +
Sbjct: 209 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 209 IGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + + DV+SFG++L E F+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G F ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
++DF +VLE SL + L+ L + + + +YLH VI
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 143
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREGRVST 224
H DLK N+ L++++ + DFG+A + + + K +TL T Y+APE + S
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSKKGHSF 200
Query: 225 NGDVYSFGIMLMETFTKKKP 244
DV+S G ++ K P
Sbjct: 201 EVDVWSIGCIMYTLLVGKPP 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G F ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
++DF +VLE SL + L+ L + + + +YLH VI
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL-ATIGYMAPEYGREGRVST 224
H DLK N+ L++++ + DFG+A T + + +TL T Y+APE + S
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 225 NGDVYSFGIMLMETFTKKKP 244
DV+S G ++ K P
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRHRNLIK 103
+G G F V K R + G+E A K + G + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ N L+LE + G L L L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH---TKK 135
Query: 164 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ H DLKP N+ LLD N+ + H+ DFG+A + + K+ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 220 GRVSTNGDVYSFGIM 234
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVF----HLQCGGVFKSFDVECEVMKSI-RHR 99
+G G+FG V +A + M VAVK+ HL S E +V+ + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 87
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEK----------CLYSSNCVLDIFQRL------ 143
N++ ++ C+ ++ EY +G L C +S +++ +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 144 -NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 148 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + DV+S+GI L E F+
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 34/218 (15%)
Query: 51 IGRGSFGSVYKA------RIQDGMEVAVKVF----HLQCGGVFKSFDVECEVMKSI-RHR 99
+G G+FG V +A + M VAVK+ HL S E +V+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHM 110
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEK----------CLYSSNCVLDIFQRL------ 143
N++ ++ C+ ++ EY +G L C +S +++ +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 144 -NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
+ VA + +L S IH DL N+LL + + DFG+A+ + + +
Sbjct: 171 LSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 240
+ +MAPE + DV+S+GI L E F+
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 100/258 (38%), Gaps = 37/258 (14%)
Query: 51 IGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIRHRNLIKIISTCSN 110
+GRG FG V++ + + F G E ++ RHRN++ + + +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 111 DDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN----------IMIDVAAALEYLHFGY 160
+ ++ E++ LDIF+R+N I+ V E L F +
Sbjct: 73 MEELVMIFEFISG-------------LDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGR 218
S + H D++P N++ + + +FG A+ L D + Y APE +
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQ 176
Query: 219 EGRVSTNGDVYSFGIML------METF---TKKKPTDKIFAGEMTLKYWVSNLLPISVME 269
VST D++S G ++ + F T ++ + I E T + I M+
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 270 IVDANLLSREDKHFAAKE 287
VD L+ A E
Sbjct: 237 FVDRLLVKERKSRMTASE 254
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 48 NNLIGRGSFGSVYKA-RIQDG-------MEVAVKVFHLQCGGVFKSFDVECEVMKSIRHR 99
N +G+G+F ++K R + G EV +KV +SF +M + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
+L+ C D LV E++ GSL+ L + ++I +L + +AAA +HF
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA---MHFL 129
Query: 160 YSAPVIHCDLKPSNVLL---DDNMVAH-----LSDFGIAKLLTGEDQSKSQTQTLATIGY 211
+IH ++ N+LL +D + LSD GI+ + +D + + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER------IPW 183
Query: 212 MAPEYGREGR-VSTNGDVYSFGIMLME 237
+ PE + ++ D +SFG L E
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRHRNLIK 103
+G G F V K R + G+E A K + G + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ N L+LE + G L L L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH---TKK 135
Query: 164 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ H DLKP N+ LLD N+ + H+ DFG+A + + K+ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 220 GRVSTNGDVYSFGIM 234
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 93/228 (40%), Gaps = 27/228 (11%)
Query: 24 MPPVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGV 82
M P T F YL+L +G+G+FG V + + G A+K+ + V
Sbjct: 3 MDPRVTMNEFEYLKL------------LGKGTFGKVILVKEKATGRYYAMKILKKE---V 47
Query: 83 FKSFD------VECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCV 136
+ D E V+++ RH L + + D V+EY G L L
Sbjct: 48 IVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVF 107
Query: 137 LDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE 196
+ R ++ +AL+YLH V++ DLK N++LD + ++DFG+ K G
Sbjct: 108 SEDRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGI 162
Query: 197 DQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
+ T Y+APE + D + G+++ E + P
Sbjct: 163 KDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 48 NNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFKSFDVECEVMKSIR-HRNLIKII 105
+ L+G G++ V A +Q+G E AVK+ Q G E E + + ++N++++I
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
+D LV E + GS+ + + + ++ DVAAAL++LH + +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 166 HCDLKPSNVLLD 177
H DLKP N+L +
Sbjct: 134 HRDLKPENILCE 145
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 38 LFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVF--KSFDVECEVMK 94
+++ + + + +G G++GSV A + G VAVK + K E ++K
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK 76
Query: 95 SIRHRNLIKIISTC----SNDDFKALVL-EYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
++H N+I ++ S ++F + L ++ L + D Q L + +
Sbjct: 77 HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL--IYQI 134
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
L+Y+H SA +IH DLKPSN+ ++++ + DF +A+ E T +AT
Sbjct: 135 LRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE-----MTGYVATR 186
Query: 210 GYMAPEYGREG-RVSTNGDVYSFGIMLMETFTKK 242
Y APE + D++S G ++ E T +
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRHRNLIK 103
+G G F V K R + G+E A K + G + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ N L+LE + G L L L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH---TKK 135
Query: 164 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ H DLKP N+ LLD N+ + H+ DFG+A + + K+ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 220 GRVSTNGDVYSFGIM 234
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRHRNLIK 103
+G G F V K R + G+E A K + G + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ N L+LE + G L L L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH---TKK 135
Query: 164 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ H DLKP N+ LLD N+ + H+ DFG+A + + K+ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 220 GRVSTNGDVYSFGIM 234
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 11/202 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFD-VECE---VMKSIRHRNLIKI 104
+IGRGS+ V R++ + A++V + + D V+ E ++ H L+ +
Sbjct: 59 VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 118
Query: 105 ISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPV 164
S + V+EY+ G L + + + R +++ AL YLH +
Sbjct: 119 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGI 174
Query: 165 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVST 224
I+ DLK NVLLD L+D+G+ K G + + T Y+APE R
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGF 232
Query: 225 NGDVYSFGIMLMETFTKKKPTD 246
+ D ++ G+++ E + P D
Sbjct: 233 SVDWWALGVLMFEMMAGRSPFD 254
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVK-VFHLQCGG----------VFKS 85
EL ++ I GS+G+V +G+ VA+K VF+ G + K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 86 FDVECEVMKSIRHRNLIKIISTCSNDDFKA-----LVLEYMPHGSLEKCLYSSNCVLDIF 140
E ++ H N++ + + + A LV E M L + ++ V+
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSK 200
M + L LH A V+H DL P N+LL DN + DF +A+ T +
Sbjct: 135 HIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---A 188
Query: 201 SQTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLMETFTKK 242
++T + Y APE + + T D++S G ++ E F +K
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVK-VFHLQCGG----------VFKS 85
EL ++ I GS+G+V +G+ VA+K VF+ G + K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 86 FDVECEVMKSIRHRNLIKIISTCSNDDFKA-----LVLEYMPHGSLEKCLYSSNCVLDIF 140
E ++ H N++ + + + A LV E M L + ++ V+
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQ 134
Query: 141 QRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSK 200
M + L LH A V+H DL P N+LL DN + DF +A+ T +
Sbjct: 135 HIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD---A 188
Query: 201 SQTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLMETFTKK 242
++T + Y APE + + T D++S G ++ E F +K
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKAL--VLEYMPHGSLEKCLYSSNCVLDIFQRLNIM 146
E ++++ +RH+N+I+++ N++ + + V+EY G E + Q
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 147 IDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTL 206
+ LEYLH S ++H D+KP N+LL +S G+A+ L + +
Sbjct: 116 CQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 207 ATIGYMAPEYGREGRVSTNG---DVYSFGIMLMETFTKKKP 244
+ + PE G + +G D++S G+ L T P
Sbjct: 173 GSPAFQPPEIAN-GLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRHRNLIK 103
+G G F V K R + G+E A K + G + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ N L+LE + G L L L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH---TKK 135
Query: 164 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ H DLKP N+ LLD N+ + H+ DFG+A + + K+ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 220 GRVSTNGDVYSFGIM 234
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)
Query: 51 IGRGSFGSVYKARIQD-GMEVAVKVFHLQC------GGVFKSFDVECEVMKSIRHRNLIK 103
+G G F V K R + G+E A K + G + + E +++ + H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAP 163
+ N L+LE + G L L L + + + + + YLH +
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQILDGVNYLH---TKK 135
Query: 164 VIHCDLKPSNV-LLDDNM-VAHLS--DFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE 219
+ H DLKP N+ LLD N+ + H+ DFG+A + + K+ T ++APE
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN---IFGTPEFVAPEIVNY 192
Query: 220 GRVSTNGDVYSFGIM 234
+ D++S G++
Sbjct: 193 EPLGLEADMWSIGVI 207
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 12/197 (6%)
Query: 45 FSENNLIGRGSFGSVYKARI-QDGMEVAVKVFHLQCGGVFKSFDVECEVM---KSIRHRN 100
F + +G GS+G V+K R +DG AVK G EV K +H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 101 LIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+++ L E + SL++ + L Q + D AL +LH
Sbjct: 119 CVRLEQAWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH--- 174
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
S ++H D+KP+N+ L L DFG+ L + Q YMAPE +G
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDPRYMAPEL-LQG 230
Query: 221 RVSTNGDVYSFGIMLME 237
T DV+S G+ ++E
Sbjct: 231 SYGTAADVFSLGLTILE 247
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 30/199 (15%)
Query: 51 IGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV--ECEVMKSIRHRNLIKIIST 107
+G G++G V R + +E A+K+ + + E V+K + H N++K+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN--------IMIDVAAALEYLHFG 159
+ LV+E C +I R+ I+ V + + YLH
Sbjct: 105 FEDKRNYYLVME---------CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH-- 153
Query: 160 YSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
++H DLKP N+LL+ + + + DFG++ + + K + L T Y+APE
Sbjct: 154 -KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAPEV 209
Query: 217 GREGRVSTNGDVYSFGIML 235
R+ + DV+S G++L
Sbjct: 210 LRK-KYDEKCDVWSIGVIL 227
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G F ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
++DF +VLE SL + L+ L + + + +YLH VI
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 137
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H DLK N+ L++++ + DFG+A + + + K T Y+APE + S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK--VLCGTPNYIAPEVLSKKGHSFE 195
Query: 226 GDVYSFGIMLMETFTKKKP 244
DV+S G ++ K P
Sbjct: 196 VDVWSIGCIMYTLLVGKPP 214
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 173
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T+ T Y+APE + + D++S G+++
Sbjct: 174 LTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + + + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G F ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
++DF +VLE SL + L+ L + + + +YLH VI
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 161
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H DLK N+ L++++ + DFG+A + + + K T Y+APE + S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKK--VLCGTPNYIAPEVLSKKGHSFE 219
Query: 226 GDVYSFGIMLMETFTKKKP 244
DV+S G ++ K P
Sbjct: 220 VDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 10/199 (5%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFH---LQCGGVFKSFDVECEVMKSIRHRNLIKII 105
+G+G F ++ D EV A K+ L + +E + +S+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 106 STCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVI 165
++DF +VLE SL + L+ L + + + +YLH VI
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 163
Query: 166 HCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRVSTN 225
H DLK N+ L++++ + DFG+A + E + + T Y+APE + S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKV--EYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 226 GDVYSFGIMLMETFTKKKP 244
DV+S G ++ K P
Sbjct: 222 VDVWSIGCIMYTLLVGKPP 240
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 83 FKSFDVECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEK-------CLYSSNC 135
+ F E +++ I++ + +N D ++ EYM + S+ K + C
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 136 VLDIFQRLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTG 195
+ I I+ V + Y+H + H D+KPSN+L+D N LSDFG ++ +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 196 EDQSKSQTQTLATIGYMAPEYGREGRVSTNG---DVYSFGIMLMETF 239
+ S+ T +M PE+ S NG D++S GI L F
Sbjct: 205 KKIKGSR----GTYEFMPPEFF-SNESSYNGAKVDIWSLGICLYVMF 246
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 30/213 (14%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-- 93
L + +D + IG G+FG R + E+ V V +++ G +V+ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDE-NVKREIINH 69
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----YSSNCVLDIFQRLNIMID 148
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTL 206
+ + Y H + V H DLK N LLD + L FG +K Q KS T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS---TV 177
Query: 207 ATIGYMAPEY----GREGRVSTNGDVYSFGIML 235
T Y+APE +G+V+ DV+S G+ L
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 39 FQA-TDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV---ECEVM 93
FQ +D + +G G++G V + + G E A+K+ + E V+
Sbjct: 16 FQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN---IMIDVA 150
K + H N++K+ + LV+E G L + + F ++ IM V
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVL 131
Query: 151 AALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLA 207
+ YLH ++H DLKP N+LL+ + + + DFG++ + K + L
Sbjct: 132 SGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK---ERLG 185
Query: 208 TIGYMAPEYGREGRVSTNGDVYSFGIML 235
T Y+APE R+ + DV+S G++L
Sbjct: 186 TAYYIAPEVLRK-KYDEKCDVWSCGVIL 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 106/243 (43%), Gaps = 42/243 (17%)
Query: 35 YLELFQATDGFSENNLIGRGSFGSVY--KARIQDGMEVAVKVFHLQCGGVFKSFDVECEV 92
Y + Q ++ F + IG G+F SVY A++Q G E + + HL E +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 93 MKSIRHRNLIKIISTC-SNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRL-NIMIDVA 150
+ ++ + + C +D + + Y+ H S L S + FQ + M+++
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLS-----FQEVREYMLNLF 127
Query: 151 AALEYLH-FGYSAPVIHCDLKPSNVLLDDNMVAH-LSDFGIA-----------KLLTGED 197
AL+ +H FG ++H D+KPSN L + + + L DFG+A K + E
Sbjct: 128 KALKRIHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEA 183
Query: 198 QSK-----------SQTQTLA----TIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTK 241
Q + S+ Q +A T G+ APE + T D++S G++ + +
Sbjct: 184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSG 243
Query: 242 KKP 244
+ P
Sbjct: 244 RYP 246
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 126 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 179
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 180 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 166 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 219
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 49 NLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFD------VECEVMKSIRHRNL 101
L+G+G+FG V + + G A+K+ + V + D E V+++ RH L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ + D V+EY G L L + R ++ +AL+YLH
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 267
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
V++ DLK N++LD + ++DFG+ K G + T Y+APE +
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D + G+++ E + P
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 127 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 180
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 181 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 121 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 174
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 175 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 49 NLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFD------VECEVMKSIRHRNL 101
L+G+G+FG V + + G A+K+ + V + D E V+++ RH L
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ + D V+EY G L L + R ++ +AL+YLH
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 270
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
V++ DLK N++LD + ++DFG+ K G + T Y+APE +
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYLAPEVLEDND 328
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D + G+++ E + P
Sbjct: 329 YGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCG-----GVFKSFDVECEV--MK 94
D + +G G F V K R + G++ A K + GV + D+E EV +K
Sbjct: 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE-DIEREVSILK 69
Query: 95 SIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALE 154
I+H N+I + N L+ E + G L L + + + + + +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEE-EATEFLKQILNGVY 128
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDDNMVA----HLSDFGIAKLLTGEDQSKSQTQTLATIG 210
YLH S + H DLKP N++L D V + DFG+A + ++ K+ T
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN---IFGTPE 182
Query: 211 YMAPEYGREGRVSTNGDVYSFGIM 234
++APE + D++S G++
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 175
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 175
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 176 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 128 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 181
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 182 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 172 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 225
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 226 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 234
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 120 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 173
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 174 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH--LQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++GSV A + G +VA+K Q K E ++K ++H N+I ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 108 CSND-------DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+ DF LV+ +M L+K + F I V L+ L + +
Sbjct: 110 FTPASSLRNFYDF-YLVMPFM-QTDLQKIMGME------FSEEKIQYLVYQMLKGLKYIH 161
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
SA V+H DLKP N+ ++++ + DFG+A+ E T + T Y APE
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSW 216
Query: 221 -RVSTNGDVYSFGIMLMETFTKK 242
+ D++S G ++ E T K
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 51 IGRGSFGSVYKA-RIQDGMEVAVKVFH--LQCGGVFKSFDVECEVMKSIRHRNLIKIIST 107
+G G++GSV A + G +VA+K Q K E ++K ++H N+I ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 108 CSND-------DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGY 160
+ DF LV+ +M L+K + F I V L+ L + +
Sbjct: 92 FTPASSLRNFYDF-YLVMPFM-QTDLQKIMGLK------FSEEKIQYLVYQMLKGLKYIH 143
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREG 220
SA V+H DLKP N+ ++++ + DFG+A+ E T + T Y APE
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRWYRAPEVILSW 198
Query: 221 -RVSTNGDVYSFGIMLMETFTKK 242
+ D++S G ++ E T K
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 153 LEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYM 212
LE +H + ++H DLKP+N L+ D M+ L DFGIA + + S + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 213 APEYGREGRVS-TNG----------DVYSFGIMLMETFTKKKPTDKIF 249
PE ++ S NG DV+S G +L K P +I
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERM 121
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 122 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 175
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 227
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 49 NLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFD------VECEVMKSIRHRNL 101
L+G+G+FG V + + G A+K+ + V + D E V+++ RH L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ + D V+EY G L L + R ++ +AL+YLH
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 127
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
V++ DLK N++LD + ++DFG+ K G + T Y+APE +
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDND 185
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D + G+++ E + P
Sbjct: 186 YGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 48 NNLIGRGSFGSVYKA-RIQDG-------MEVAVKVFHLQCGGVFKSFDVECEVMKSIRHR 99
N +G+G+F ++K R + G EV +KV +SF +M + H+
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 100 NLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFG 159
+L+ C D LV E++ GSL+ L + ++I +L + +A A +HF
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWA---MHFL 129
Query: 160 YSAPVIHCDLKPSNVLL---DDNMVAH-----LSDFGIAKLLTGEDQSKSQTQTLATIGY 211
+IH ++ N+LL +D + LSD GI+ + +D + + I +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQER------IPW 183
Query: 212 MAPEYGREGR-VSTNGDVYSFGIMLME 237
+ PE + ++ D +SFG L E
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 49 NLIGRGSFGSVYKA-RIQDGMEVAVKV-----FHLQCGGVFKSFDVECEVMKSIRHRNLI 102
+IG+G F V + + G + AVK+ F G + E + ++H +++
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA---------L 153
+++ T S+D +V E+M ++ +I +R + + A L
Sbjct: 92 ELLETYSSDGMLYMVFEFMD---------GADLCFEIVKRADAGFVYSEAVASHYMRQIL 142
Query: 154 EYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG 210
E L + + +IH D+KP VLL +++ L FG+A L GE + + + T
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGR-VGTPH 200
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP----TDKIFAGEMTLKY 257
+MAPE + DV+ G++L + P +++F G + KY
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY 251
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 49 NLIGRGSFGSVYKA-RIQDGMEVAVKV-----FHLQCGGVFKSFDVECEVMKSIRHRNLI 102
+IG+G F V + + G + AVK+ F G + E + ++H +++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAA---------L 153
+++ T S+D +V E+M ++ +I +R + + A L
Sbjct: 90 ELLETYSSDGMLYMVFEFMD---------GADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 154 EYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIG 210
E L + + +IH D+KP VLL +++ L FG+A L GE + + + T
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGR-VGTPH 198
Query: 211 YMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKP----TDKIFAGEMTLKY 257
+MAPE + DV+ G++L + P +++F G + KY
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY 249
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 43 DGFSENNLIGRGSFGSVYKARI-QDGMEVAVKV---FHLQCGGVFKSFDVECEVMKSIRH 98
D F +IGRG+F V ++ Q G A+K+ + + G F E +V+ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 99 RNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH- 157
R + ++ ++++ LV+EY G L L + + ++ A++ +H
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPE-- 215
GY +H D+KP N+LLD L+DFG L + +S + T Y++PE
Sbjct: 181 LGY----VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV-AVGTPDYLSPEIL 235
Query: 216 -----YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
G D ++ G+ E F + P
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
H N++K+ + LV+E + G L + + + + IM + +A+ ++H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH 123
Query: 158 FGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAP 214
V+H DLKP N+L +DN+ + DFG A+L ++Q T+ Y AP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTPCFTLHYAAP 178
Query: 215 EYGREGRVSTNGDVYSFGIMLMETFTKKKP 244
E + + D++S G++L + + P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 136 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 189
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
T T Y+APE + + D++S G+++
Sbjct: 190 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 49 NLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFD------VECEVMKSIRHRNL 101
L+G+G+FG V + + G A+K+ + V + D E V+++ RH L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKE---VIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 102 IKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYS 161
+ + D V+EY G L L + R ++ +AL+YLH
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SE 128
Query: 162 APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGR 221
V++ DLK N++LD + ++DFG+ K G + T Y+APE +
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDND 186
Query: 222 VSTNGDVYSFGIMLMETFTKKKP 244
D + G+++ E + P
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 89 ECEVMKSIRHRNLIKIISTC----SNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ S ++F+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
T + T Y APE N D++S G+++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 89 ECEVMKSIRHRNLIKIISTC----SNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ S ++F+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
T + T Y APE N D++S G+++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGE 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 30/217 (13%)
Query: 45 FSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQ-----C---GGVFKSFDVECEVMKS 95
+S + +G G+FG V+ A ++ EV VK + C +E ++
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 96 IRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN------IMIDV 149
+ H N+IK++ N F LV+E HGS +D RL+ I +
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVME--KHGSGLDLF----AFIDRHPRLDEPLASYIFRQL 139
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
+A+ YL +IH D+K N+++ ++ L DFG A L ++ K TI
Sbjct: 140 VSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTI 193
Query: 210 GYMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKP 244
Y APE G R +++S G+ L ++ P
Sbjct: 194 EYCAPEVLMGNPYR-GPELEMWSLGVTLYTLVFEENP 229
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 24/225 (10%)
Query: 37 ELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQ--CGGVFKSFDVECEVM 93
E F+A + L+G+G FG+V+ R+ D ++VA+KV G S V C +
Sbjct: 27 EAFEAE--YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 94 KSI--------RHRNLIKIISTCSNDDFKALVLEY-MPHGSLEKCLYSSNCVLDIFQRLN 144
++ H +I+++ + LVLE +P L + + + R
Sbjct: 85 VALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC- 143
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSKSQT 203
V AA+++ H S V+H D+K N+L+D A L DFG LL E T
Sbjct: 144 FFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE----PYT 196
Query: 204 QTLATIGYMAPEY-GREGRVSTNGDVYSFGIMLMETFTKKKPTDK 247
T Y PE+ R + V+S GI+L + P ++
Sbjct: 197 DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 42 TDGFSENNLIGRGSFGSVYKARIQ-DGMEVAVKVFHLQCGGVFKSFDV---ECEVMKSIR 97
+D + +G G++G V + + G E A+K+ + E V+K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 98 HRNLIKIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLN---IMIDVAAALE 154
H N++K+ + LV+E G L + + F ++ IM V +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGEL----FDEIILRQKFSEVDAAVIMKQVLSGTT 118
Query: 155 YLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGY 211
YLH ++H DLKP N+LL+ + + + DFG++ + K + L T Y
Sbjct: 119 YLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK---ERLGTAYY 172
Query: 212 MAPEYGREGRVSTNGDVYSFGIML 235
+APE R+ + DV+S G++L
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVIL 195
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 26 PVATWRRFSYLELFQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFHLQCGGVFK 84
P W S++ + D + +GRG + V++A I + +V VK+ K
Sbjct: 20 PREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK 79
Query: 85 SFDVECEVMKSIRHRNLIKIISTCSNDDFK---ALVLEYMPHGSLEKCLYSSNCVLDIFQ 141
E ++++++R I ++ D ALV E++ + K LY + DI
Sbjct: 80 R---EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-KQLYQTLTDYDI-- 133
Query: 142 RLNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLTGEDQSK 200
R M ++ AL+Y H S ++H D+KP NV++D ++ L D+G+A+ +
Sbjct: 134 RF-YMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---PGQ 186
Query: 201 SQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKKP 244
+A+ + PE + ++ D++S G ML +K+P
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 36 LELFQATDGFSENNLIGRGSFGSVYKARIQDGMEVAVKVFHLQCGGVFKSFDVECEVM-- 93
L + +D + IG G+FG R + E+ V V +++ G +V+ E++
Sbjct: 12 LPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNEL-VAVKYIERGEKIDE-NVKREIINH 69
Query: 94 KSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKCL-----YSSNCVLDIFQRLNIMID 148
+S+RH N+++ A+V+EY G L + + +S + FQ+L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL----- 124
Query: 149 VAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS--DFGIAKLLTGEDQSKSQTQTL 206
+ + Y H + V H DLK N LLD + L FG +K Q K T+
Sbjct: 125 -ISGVSYCH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD---TV 177
Query: 207 ATIGYMAPEY----GREGRVSTNGDVYSFGIML 235
T Y+APE +G+V+ DV+S G+ L
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVA---DVWSCGVTL 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVECEVMKS------IRHRNLI 102
++G+GSFG V A + E+ A+K+ L+ V + DVEC +++ + L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKI--LKKDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCV--LDIFQRLNIMIDVAAALEYLHFGY 160
++ S D V+EY+ G L +Y V Q + +++ L +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDL---MYHIQQVGKFKEPQAVFYAAEISIGLFFLH--- 137
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK--LLTGEDQSKSQTQTLATIGYMAPEYGR 218
+I+ DLK NV+LD ++DFG+ K ++ G + + T Y+APE
Sbjct: 138 KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG----VTTREFCGTPDYIAPEIIA 193
Query: 219 EGRVSTNGDVYSFGIMLMETFTKKKPTD 246
+ D +++G++L E + P D
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 22/195 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKA----LVLEYMPHGSLE---KCLYSSNCVLDIFQ 141
E ++ + H N++++++ C + L+L + G+L + L L Q
Sbjct: 76 EADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ 135
Query: 142 RLNIMIDVAAALEYLHF-GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSK 200
L +++ + LE +H GY+ H DLKP+N+LL D L D G +
Sbjct: 136 ILWLLLGICRGLEAIHAKGYA----HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191
Query: 201 SQTQTL-------ATIGYMAPEY---GREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFA 250
Q TL TI Y APE + DV+S G +L + P D +F
Sbjct: 192 RQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ 251
Query: 251 GEMTLKYWVSNLLPI 265
++ V N L I
Sbjct: 252 KGDSVALAVQNQLSI 266
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 50 LIGRGSFGSV-YKARIQDGMEVAVKVFHLQ-CGGVFKSFDVECEVMKSIRHRNLIKIIST 107
++G GS G+V ++ Q G VAVK + C + E S H N+I+ +
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCS 77
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNC------VLDIFQRLNIMIDVAAALEYLHFGYS 161
+ D F + LE + + +L+ + S N + + ++++ +A+ + +LH S
Sbjct: 78 ETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 133
Query: 162 APVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLL-TGEDQSKSQTQTLA 207
+IH DLKP N+L+ +N+ +SDFG+ K L +G+ ++ +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPS 193
Query: 208 -TIGYMAPEYGREG-------RVSTNGDVYSFGIMLMETFTKKK 243
T G+ APE E R++ + D++S G + +K K
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 50 LIGRGSFGSV-YKARIQDGMEVAVKVFHLQ-CGGVFKSFDVECEVMKSIRHRNLIKIIST 107
++G GS G+V ++ Q G VAVK + C + E S H N+I+ +
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCS 95
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNC------VLDIFQRLNIMIDVAAALEYLHFGYS 161
+ D F + LE + + +L+ + S N + + ++++ +A+ + +LH S
Sbjct: 96 ETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 151
Query: 162 APVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLL-TGEDQSKSQ-TQTL 206
+IH DLKP N+L+ +N+ +SDFG+ K L +G+ +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 207 ATIGYMAPEYGREG---RVSTNGDVYSFGIMLMETFTKKK 243
T G+ APE E R++ + D++S G + +K K
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 144 NIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSK--- 200
I + + ALE+LH S VIH D+KPSNVL++ DFGI+ L +D +K
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLV-DDVAKDID 196
Query: 201 SQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYWVS 260
+ + + PE ++G S D++S GI +E + P D LK V
Sbjct: 197 AGCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
Query: 261 NLLP 264
P
Sbjct: 256 EPSP 259
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKS 201
IM D+ A+++LH S + H D+KP N+L + + V L+DFG AK T Q+
Sbjct: 114 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNAL 167
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
QT T Y+APE + + D++S G+++
Sbjct: 168 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 50 LIGRGSFGSV-YKARIQDGMEVAVKVFHLQ-CGGVFKSFDVECEVMKSIRHRNLIKIIST 107
++G GS G+V ++ Q G VAVK + C + E S H N+I+ +
Sbjct: 40 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCS 95
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNC------VLDIFQRLNIMIDVAAALEYLHFGYS 161
+ D F + LE + + +L+ + S N + + ++++ +A+ + +LH S
Sbjct: 96 ETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 151
Query: 162 APVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLL-TGEDQSKSQ-TQTL 206
+IH DLKP N+L+ +N+ +SDFG+ K L +G+ +
Sbjct: 152 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 211
Query: 207 ATIGYMAPEYGREG---RVSTNGDVYSFGIMLMETFTKKK 243
T G+ APE E R++ + D++S G + +K K
Sbjct: 212 GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVEC-----EVMKSIRHRNLIK 103
+IGRG+FG V ++++ + A+K+ L + K + C +V+ + + +
Sbjct: 81 VIGRGAFGEVAVVKMKNTERIYAMKI--LNKWEMLKRAETACFREERDVLVNGDCQWITA 138
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNI--MIDVAAALEYLHFGY 160
+ +++ LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY-- 196
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE- 219
+H D+KP NVLLD N L+DFG + L +D + + + T Y++PE +
Sbjct: 197 ----VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 220 ----GRVSTNGDVYSFGIMLMETFTKKKP 244
G+ D +S G+ + E + P
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 27/229 (11%)
Query: 50 LIGRGSFGSVYKA-RIQDGMEVAVKVFHLQ------CGGVFKSFDVECEVM----KSIRH 98
L+G G FGSVY R+ D + VA+K H++ G + V EV+ S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 72
Query: 99 RNLIKIISTCSNDDFKALVLEYM-PHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLH 157
+I+++ D L+LE M P L + + + R + V A+ + H
Sbjct: 73 SGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELAR-SFFWQVLEAVRHCH 131
Query: 158 FGYSAPVIHCDLKPSNVLLDDNMVA-HLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEY 216
+ V+H D+K N+L+D N L DFG LL + T T Y PE+
Sbjct: 132 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPPEW 184
Query: 217 GREGRV-STNGDVYSFGIMLMETFTKKKP---TDKIFAGEMTLKYWVSN 261
R R + V+S GI+L + P ++I G++ + VS+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 233
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLTGEDQSKS 201
IM D+ A+++LH S + H D+KP N+L + + V L+DFG AK T Q+
Sbjct: 133 IMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNAL 186
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 235
QT T Y+APE + + D++S G+++
Sbjct: 187 QTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 43 DGFSENNLIGRGSFGSVYKARIQD-GMEVAVKVFHLQCGGVFKSFDVEC-EVMKSIRHRN 100
D F + G+G+FG+V + + GM VA+K + F++ +++ + + + H N
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK--KVIQDPRFRNRELQIMQDLAVLHHPN 80
Query: 101 LIKIISTC-------SNDDFKALVLEYMPHGSLEKC---LYSSNCVLDIFQRLNIMIDVA 150
++++ S D + +V+EY+P +L +C Y + +
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 151 AALEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
++ LH S V H D+KP NVL+++ + L DFG AK L+ S+ + +
Sbjct: 140 RSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS---PSEPNVAYICSR 195
Query: 210 GYMAPE--YGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
Y APE +G + +T D++S G + E + IF G+
Sbjct: 196 YYRAPELIFGNQ-HYTTAVDIWSVGCIFAEMML----GEPIFRGD 235
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 33 FSYLELFQATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFH------LQCGGVFKS 85
F ++ D + +LIGRGS+G VY A ++ + VA+K + + C + +
Sbjct: 16 FQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR- 74
Query: 86 FDVECEVMKSIRHRNLIKIISTCSNDD---FKALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E ++ ++ +I++ DD F L + S K L+ + L
Sbjct: 75 ---EITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHI 131
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQS--- 199
I+ ++ ++H + +IH DLKP+N LL+ + + DFG+A+ + E +
Sbjct: 132 KTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV 188
Query: 200 -----------------KSQTQTLATIGYMAPEY-GREGRVSTNGDVYSFGIMLME 237
K T + T Y APE + + + D++S G + E
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAE 244
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 51 IGRGSFGSVY-KARIQDGMEVAVKVFHLQCGGV-FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG +Y A I G EVA+K L+C +E + K ++ I I C
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIK---LECVKTKHPQLHIESKFYKMMQGGVGIPSIKWC 73
Query: 109 SND-DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ D+ +V+E + SLE + + L + + + +EY+H S IH
Sbjct: 74 GAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHR 129
Query: 168 DLKPSNVLL----DDNMVAHLSDFGIAK 191
D+KP N L+ N+V ++ DFG+AK
Sbjct: 130 DVKPDNFLMGLGKKGNLV-YIIDFGLAK 156
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 121
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 122 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 175
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 227
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVEC-----EVMKSIRHRNLIK 103
+IGRG+FG V ++++ + A+K+ L + K + C +V+ + + +
Sbjct: 97 VIGRGAFGEVAVVKMKNTERIYAMKI--LNKWEMLKRAETACFREERDVLVNGDCQWITA 154
Query: 104 IISTCSNDDFKALVLEYMPHGSLEKCLYS-SNCVLDIFQRLNI--MIDVAAALEYLHFGY 160
+ +++ LV++Y G L L + + + R I M+ ++ LH+
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHY-- 212
Query: 161 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGRE- 219
+H D+KP NVLLD N L+DFG + L +D + + + T Y++PE +
Sbjct: 213 ----VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 220 ----GRVSTNGDVYSFGIMLMETFTKKKP 244
G+ D +S G+ + E + P
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVECEVMKSI------RHRNLI 102
++G+GSFG V + + E+ AVK+ L+ V + DVEC +++ + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
++ S D V+EY+ G L +Y V F+ + + A L F S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 140
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
+I+ DLK NV+LD ++DFG+ K + + T Y+APE
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPY 198
Query: 223 STNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ D ++FG++L E + P F GE
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAP----FEGE 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 122
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 176
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 228
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 31/164 (18%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
IM + A++YLH S + H D+KP N+L N + L+DFG AK TGE KS
Sbjct: 122 IMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKS 178
Query: 202 -QTQTLATIGYM-----APEYGREGRVSTNG-------DVYSFG-----------IMLME 237
+L I Y+ P Y G + G Y F ML+
Sbjct: 179 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 238
Query: 238 TFTKKKPTDKIFAGEMTLKYWVSNLLPISVMEIVDANLLSREDK 281
K +PT ++ E W+ + + + +L +EDK
Sbjct: 239 NLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL-KEDK 281
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 67 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 122
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 123 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 176
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 228
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 104/253 (41%), Gaps = 48/253 (18%)
Query: 40 QATDGFSENNLIGRGSFGSVYKARIQDGME-VAVKVFH------LQCGGVFKSFDVECEV 92
+ D + +LIGRGS+G VY A ++ + VA+K + + C + + E +
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR----EITI 80
Query: 93 MKSIRHRNLIKIISTCSNDD---FKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
+ ++ +I++ +D F L + S K L+ + L I+ ++
Sbjct: 81 LNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGE------------- 196
+++H + +IH DLKP+N LL+ + + DFG+A+ + +
Sbjct: 141 LLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 197 ----------DQSKSQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLMETFTKKK-- 243
+ K T + T Y APE TN D++S G + E K
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
Query: 244 ---PTDK--IFAG 251
PT++ +F G
Sbjct: 258 INNPTNRFPLFPG 270
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 72 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 127
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 128 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 181
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 129
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 183
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 235
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 234
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 74 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 129
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 130 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 183
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 235
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 50 LIGRGSFGSVYKARIQDGMEV-AVKVFHLQCGGVFKSFDVECEVMKSI------RHRNLI 102
++G+GSFG V + + E+ AVK+ L+ V + DVEC +++ + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKI--LKKDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 103 KIISTCSNDDFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSA 162
++ S D V+EY+ G L +Y V F+ + + A L F S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDL---MYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQSK 461
Query: 163 PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATIGYMAPEYGREGRV 222
+I+ DLK NV+LD ++DFG+ K + + T Y+APE
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD--GVTTKXFCGTPDYIAPEIIAYQPY 519
Query: 223 STNGDVYSFGIMLMETFTKKKPTDKIFAGE 252
+ D ++FG++L E + P F GE
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAP----FEGE 545
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 166
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMM 220
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 272
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 89 ECEVMKSIRHRNLIKIISTC----SNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ S ++F+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 89 ECEVMKSIRHRNLIKIISTCSN----DDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ + ++F+ LV+E M +L + + LD +
Sbjct: 111 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERM 166
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 167 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMM 220
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMTLKYW 258
T + T Y APE N D++S G ++ E K +F G + W
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK----ILFPGRDYIDQW 272
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 39 FQATDGFSENNLIGRGSFGSVYKA-RIQDGMEVAVKVFH--LQCGGVFKSFDVECEVMKS 95
F + + IG G+ G V A G+ VAVK Q K E ++K
Sbjct: 20 FTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC 79
Query: 96 IRHRNLIKIISTCSN----DDFK--ALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDV 149
+ H+N+I +++ + ++F+ LV+E M +L + ++ LD + ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQM 135
Query: 150 AAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQTQTLATI 209
+++LH SA +IH DLKPSN+++ + + DFG+A+ + T + T
Sbjct: 136 LCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFMMTPYVVTR 189
Query: 210 GYMAPEYGREGRVSTNGDVYSFGIMLME 237
Y APE + N D++S G ++ E
Sbjct: 190 YYRAPEVILGMGYAANVDIWSVGCIMGE 217
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 50 LIGRGSFGSV-YKARIQDGMEVAVKVFHLQ-CGGVFKSFDVECEVMKSIRHRNLIKIIST 107
++G GS G+V ++ Q G VAVK + C + E S H N+I+ +
Sbjct: 22 ILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYYCS 77
Query: 108 CSNDDFKALVLEYMPHGSLEKCLYSSNC------VLDIFQRLNIMIDVAAALEYLHFGYS 161
+ D F + LE + + +L+ + S N + + ++++ +A+ + +LH S
Sbjct: 78 ETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---S 133
Query: 162 APVIHCDLKPSNVLLD-------------DNMVAHLSDFGIAKLL-TGEDQSKSQTQTLA 207
+IH DLKP N+L+ +N+ +SDFG+ K L +G+ + +
Sbjct: 134 LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPS 193
Query: 208 -TIGYMAPEYGREG-------RVSTNGDVYSFGIMLMETFTKKK 243
T G+ APE E R++ + D++S G + +K K
Sbjct: 194 GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGK 237
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 51 IGRGSFGSVY-KARIQDGMEVAVKVFHLQCGGV-FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG +Y I G EVA+K L+C +E ++ K ++ I I C
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIK---LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWC 73
Query: 109 SND-DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ D+ +V+E + SLE + + L + + + +EY+H S IH
Sbjct: 74 GAEGDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHR 129
Query: 168 DLKPSNVLL----DDNMVAHLSDFGIAK 191
D+KP N L+ N+V ++ DFG+AK
Sbjct: 130 DVKPDNFLMGLGKKGNLV-YIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 51 IGRGSFGSVY-KARIQDGMEVAVKVFHLQCGGV-FKSFDVECEVMKSIRHRNLIKIISTC 108
IG GSFG +Y I G EVA+K L+C +E ++ K ++ I I C
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIK---LECVKTKHPQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 109 SND-DFKALVLEYMPHGSLEKCLYSSNCVLDIFQRLNIMIDVAAALEYLHFGYSAPVIHC 167
+ D+ +V+E + SLE + + L + + + +EY+H S IH
Sbjct: 72 GAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHR 127
Query: 168 DLKPSNVLL----DDNMVAHLSDFGIAK 191
D+KP N L+ N+V ++ DFG+AK
Sbjct: 128 DVKPDNFLMGLGKKGNLV-YIIDFGLAK 154
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 89 ECEVMKSIRHRNLIKIISTC----SNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ S ++F+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 89 ECEVMKSIRHRNLIKIISTC----SNDDFKA--LVLEYMPHGSLEKCLYSSNCVLDIFQR 142
E +MK + H+N+I +++ S ++F+ +V+E M +L + + LD +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERM 128
Query: 143 LNIMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLTGEDQSKSQ 202
++ + +++LH SA +IH DLKPSN+++ + + DFG+A+ S
Sbjct: 129 SYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLART---AGTSFMM 182
Query: 203 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLME 237
T + T Y APE N D++S G ++ E
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKC--------LYSSNCVLDIF 140
E +MK + H+N+I +++ + P SLE+ L +N I
Sbjct: 67 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 114
Query: 141 QRLN------IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 194
L+ ++ + +++LH SA +IH DLKPSN+++ + + DFG+A+
Sbjct: 115 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 168
Query: 195 GEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMT 254
S T + T Y APE N D++S G ++ E K +F G
Sbjct: 169 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDY 224
Query: 255 LKYW 258
+ W
Sbjct: 225 IDQW 228
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 36/184 (19%)
Query: 89 ECEVMKSIRHRNLIKIISTCSNDDFKALVLEYMPHGSLEKC--------LYSSNCVLDIF 140
E +MK + H+N+I +++ + P SLE+ L +N I
Sbjct: 78 ELVLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQ 125
Query: 141 QRLN------IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLT 194
L+ ++ + +++LH SA +IH DLKPSN+++ + + DFG+A+
Sbjct: 126 MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--- 179
Query: 195 GEDQSKSQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTKKKPTDKIFAGEMT 254
S T + T Y APE N D++S G ++ E K +F G
Sbjct: 180 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK----ILFPGRDY 235
Query: 255 LKYW 258
+ W
Sbjct: 236 IDQW 239
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 145 IMIDVAAALEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLTGEDQSKS 201
I + A++YLH S + H D+KP N+L N + L+DFG AK T + S
Sbjct: 166 IXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN---S 219
Query: 202 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 234
T T Y+APE + + D +S G++
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVI 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,246,893
Number of Sequences: 62578
Number of extensions: 370252
Number of successful extensions: 3170
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 250
Number of HSP's that attempted gapping in prelim test: 950
Number of HSP's gapped (non-prelim): 1150
length of query: 335
length of database: 14,973,337
effective HSP length: 99
effective length of query: 236
effective length of database: 8,778,115
effective search space: 2071635140
effective search space used: 2071635140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)