Citrus Sinensis ID: 019844

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMALHS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccEEEEEEEcccccccccEEEEEEEEEEEccccEEEEEEEEcccccEEEEEEEEccccccccHHHHHHHcccccEEEEEEEEEcccccccEEEEEEEEEccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccEEccccccccccccccccccccEEEEEccccHHHHHHHHHHccccccccccHHHHHHcHHHHHcccccccccccccccccccccccccccccccHHcccccHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccHHHccHHHHccccccccccccccccccEEEccccccccEEEEEEEccccccccEEEEEEEEEEEEEcccEEEEEEEEcccccEEEEEEEEEccccccHHHHHHcccccccEccEEEEEEEccccccEEEEEEEEcccEEHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHcHHHccccccccccccHHHHccccccHHHHHHHHccccccHHHcccHHHHHHcHHHHHHHccccEcccccEccccccccHHHHcccHHHHHHHHccHHHHHHHccccccc
Coil and Loop (DISEMBL)
masaslgnggvgssrsvngfksssSSVDWLGREMLEMRLRdqvdndedrdsepdiidgvgaetGHVIRttiggrngnskqKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLdhpnivalkhcffsttDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGtptreeikcmnpnytefkfpqikphpwhkvfqkrlppeaVDLVCRffqyspnlrctaleacvhpffdelrdpntrlpngrplpplfnfkppelsgippetinrlipEHARKQNLFMALHS
Flexible Loop (DISEMBL)
masaslgnggvgssrsvngfksssSSVDWLGREMLEMRLRdqvdndedrdsepdiidgvgaetghvirttiggrngnskQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVaikkvlqdkrYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNysrihqrmpLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMALHS
Low Complexity Region (SEG)
MASAslgnggvgssrsvngfksssssVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKeelylnlvleyvpeTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMALHS
Disordered region (IsUnstruct)
*******************************************************IDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR**************************************************
Disordered Region (DISOPRED)
**************************************************************TGHVIR**************SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQN****L**
Disordered Region (DISEMBL)
**************RSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMALHS
Disordered Region (DISPRO)
***********************************E*R***********DSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNL******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMALHS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q39019	421	Shaggy-related protein ki	yes	no	0.597	0.475	0.805	5e-92
Q9FVS6	420	Shaggy-related protein ki	no	no	0.591	0.471	0.783	5e-89
P51138	411	Glycogen synthase kinase-	N/A	no	0.573	0.467	0.638	8e-71
P51139	411	Glycogen synthase kinase-	N/A	no	0.573	0.467	0.653	2e-70
P51137	411	Glycogen synthase kinase-	N/A	no	0.576	0.469	0.655	2e-69
P43288	405	Shaggy-related protein ki	no	no	0.519	0.429	0.694	2e-69
Q40518	409	Shaggy-related protein ki	N/A	no	0.540	0.442	0.668	7e-68
Q8VZD5	410	Shaggy-related protein ki	no	no	0.564	0.460	0.625	8e-68
P43289	409	Shaggy-related protein ki	no	no	0.573	0.469	0.616	3e-67
Q96287	472	Shaggy-related protein ki	no	no	0.525	0.372	0.661	2e-65

>sp|Q39019|KSG10_ARATH Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=2 SV=2

 Score =  337 bits (865), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 162/201 (80%), Positives = 181/201 (90%), Gaps = 1/201 (0%)

Query: 1   MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVG 60
           MAS+ LGNG VG+SRS  G KSSSSSVDWL R++ E R+RD+V+ D++RDSEPDIIDG G
Sbjct: 1   MASSGLGNG-VGTSRSAKGLKSSSSSVDWLTRDLAETRIRDKVETDDERDSEPDIIDGAG 59

Query: 61  AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
           AE GHVIRTT+ GRNG S+Q VSYI+EHVVGTGSFG+VFQAKCRETGE+VAIKKVLQDKR
Sbjct: 60  AEPGHVIRTTLRGRNGQSRQTVSYISEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKR 119

Query: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRM 180
           YKNRELQIMQMLDHPN VALKH FFS TD EE+YLNLVLE+VPETVNR+AR+YSR +Q M
Sbjct: 120 YKNRELQIMQMLDHPNAVALKHSFFSRTDNEEVYLNLVLEFVPETVNRVARSYSRTNQLM 179

Query: 181 PLIYVKLYTYQICRALAYIHN 201
           PLIYVKLYTYQICRALAYIHN
Sbjct: 180 PLIYVKLYTYQICRALAYIHN 200

May mediate extracellular signals to regulate transcription in differentiating cells.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FVS6|KSG4_ARATH Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1

 Score =  328 bits (840), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 156/199 (78%), Positives = 178/199 (89%), Gaps = 1/199 (0%)

Query: 4   ASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAET 63
           + LGNG VGSSRS    K++SSSVDWL R+MLEM++RD+ + DE+RDSEPDIIDGVGAE 
Sbjct: 3   SHLGNG-VGSSRSAKNTKNTSSSVDWLSRDMLEMKIRDKTEADEERDSEPDIIDGVGAEP 61

Query: 64  GHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN 123
           GHVI TT+ GRNG S+Q VSYIAEHVVGTGSFG+VFQAKCRETGE+VAIKKVLQDKRYKN
Sbjct: 62  GHVITTTLPGRNGQSRQTVSYIAEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKN 121

Query: 124 RELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLI 183
           RELQIMQMLDHPN+V LKH F+S T+ EE+YLNLVLE+VPETVNR AR+YSR++Q MPLI
Sbjct: 122 RELQIMQMLDHPNVVCLKHSFYSRTENEEVYLNLVLEFVPETVNRTARSYSRMNQLMPLI 181

Query: 184 YVKLYTYQICRALAYIHNC 202
           YVKLYTYQICR LAY+HNC
Sbjct: 182 YVKLYTYQICRGLAYLHNC 200

May mediate extracellular signals to regulate transcription in differentiating cells.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P51138|MSK2_MEDSA Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1

 Score =  267 bits (683), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 127/199 (63%), Positives = 158/199 (79%), Gaps = 7/199 (3%)

Query: 6   LGNGGVGSSRSVNGFKSSSS-SVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETG 64
           +   GV  +  +    +SS+ +VD L  E+L MR++D      D++ E  ++DG   E G
Sbjct: 1   MATAGVAPASGIVDVNASSAIAVDKLPDEILGMRIKD------DKEMEAHVVDGNSTEAG 54

Query: 65  HVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR 124
           HVI TTIGG+NG  KQ +SY+AE  VG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNR
Sbjct: 55  HVIVTTIGGKNGQPKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 114

Query: 125 ELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIY 184
           ELQ M++LDHPN+V LKHCFFSTT+K+ELYLNLVLE+VPETV+R+ R+YS+++QRMPLIY
Sbjct: 115 ELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSKMNQRMPLIY 174

Query: 185 VKLYTYQICRALAYIHNCI 203
           VKLY+YQICR+LAYIHNC+
Sbjct: 175 VKLYSYQICRSLAYIHNCV 193

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P51139|MSK3_MEDSA Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2

 Score =  266 bits (680), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 130/199 (65%), Positives = 160/199 (80%), Gaps = 7/199 (3%)

Query: 6   LGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEP-DIIDGVGAETG 64
           + +GGV  +       +SS  V+ L  EM +M++RD      D++ E   I+DG G ETG
Sbjct: 1   MASGGVAPASGFIDKNASSVGVEKLPEEMNDMKIRD------DKEMEAATIVDGNGTETG 54

Query: 65  HVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR 124
           H+I TTIGG+NG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNR
Sbjct: 55  HIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNR 114

Query: 125 ELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIY 184
           ELQ M++LDHPN+V+LKHCFFSTT+K+ELYLNLVLEYVPETV+R+ R+Y++++QRMP+IY
Sbjct: 115 ELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNKMNQRMPMIY 174

Query: 185 VKLYTYQICRALAYIHNCI 203
           VKLY+YQICRALAYIHN I
Sbjct: 175 VKLYSYQICRALAYIHNSI 193

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P51137|MSK1_MEDSA Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1

 Score =  263 bits (672), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/200 (65%), Positives = 156/200 (78%), Gaps = 7/200 (3%)

Query: 4   ASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAET 63
           AS+G       R V G        D L  EM +M++RD      DR+ E  ++DG G ET
Sbjct: 2   ASVGVAPTSGFREVLG-DGEIGVDDILPEEMSDMKIRD------DREMEATVVDGNGTET 54

Query: 64  GHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN 123
           GH+I TTIGGRNG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQDKRYKN
Sbjct: 55  GHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKN 114

Query: 124 RELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLI 183
           RELQ M++LDHPN+V+LKHCFFSTT+K+ELYLNLVLEYVPETV+R+ ++YS+++QRMP+I
Sbjct: 115 RELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMI 174

Query: 184 YVKLYTYQICRALAYIHNCI 203
           YVKLYTYQI RAL+YIH CI
Sbjct: 175 YVKLYTYQIFRALSYIHRCI 194

Medicago sativa (taxid: 3879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43288|KSG1_ARATH Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3

 Score =  262 bits (670), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 125/180 (69%), Positives = 152/180 (84%), Gaps = 6/180 (3%)

Query: 24  SSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVS 83
           S+ VD L  EM +M++RD      D++ E  ++DG G ETGH+I TTIGGRNG  KQ +S
Sbjct: 15  STGVDKLPEEMNDMKIRD------DKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTIS 68

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHC 143
           Y+AE VVG GSFGVVFQAKC ETGE VAIKKVLQD+RYKNRELQ M++LDHPN+V+LKHC
Sbjct: 69  YMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHC 128

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
           FFSTT+K+ELYLNLVLEYVPETV+R+ ++Y++++QRMPLIYVKLYTYQI RAL+YIH CI
Sbjct: 129 FFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCI 188

May mediate extracellular signals to regulate transcription in differentiating cells.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q40518|MSK1_TOBAC Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1

 Score =  257 bits (657), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 127/190 (66%), Positives = 155/190 (81%), Gaps = 9/190 (4%)

Query: 17  VNGFKSSSS---SVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGG 73
           V+G + SSS    VD L  EM +MR+RD      D++ E  I+DG G ETGH+I TTIGG
Sbjct: 9   VSGLRESSSHSVGVDRLPEEMNDMRIRD------DKEIEAAIVDGNGTETGHIIVTTIGG 62

Query: 74  RNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLD 133
           R+G  KQ +SY+AE +VG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LD
Sbjct: 63  RHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLD 122

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           HPN+V LKHCFFSTT+K+E+YLNLVLEYVPETV+R+ ++Y++++QRMPLI VKLYTYQI 
Sbjct: 123 HPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYNKLNQRMPLILVKLYTYQIF 182

Query: 194 RALAYIHNCI 203
           RAL+YIH+ I
Sbjct: 183 RALSYIHHTI 192

May mediate extracellular signals to regulate transcription in differentiating cells.

Nicotiana tabacum (taxid: 4097)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8VZD5|KSG5_ARATH Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1

 Score =  257 bits (657), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 122/195 (62%), Positives = 154/195 (78%), Gaps = 6/195 (3%)

Query: 9   GGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIR 68
           G + +S       ++S   + L   + EM+++D      D++ E  ++DG G ETGH+I 
Sbjct: 5   GTLPASSMATKQSNASICAEKLPEGINEMKIKD------DKEMEAAVVDGNGTETGHIIV 58

Query: 69  TTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQI 128
           TTIGG+NG  KQ +SY+AE +VG GSFG+VFQAKC ETGE VAIKKVLQDKRYKNRELQ 
Sbjct: 59  TTIGGKNGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQT 118

Query: 129 MQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY 188
           M++LDHPN+V+LKHCFFSTT+K+ELYLNLVLEYVPETV R++++YSR +QRMP+IYVKLY
Sbjct: 119 MRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYSRANQRMPIIYVKLY 178

Query: 189 TYQICRALAYIHNCI 203
           TYQICRALAYIH  +
Sbjct: 179 TYQICRALAYIHGGV 193

May mediate extracellular signals to regulate transcription in differentiating cells.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43289|KSG3_ARATH Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1

 Score =  255 bits (651), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 122/198 (61%), Positives = 157/198 (79%), Gaps = 6/198 (3%)

Query: 6   LGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGH 65
           + + G+  S +V     + +  D L  EM +M+++D      D++ E  I++G   ETGH
Sbjct: 1   MASVGIEPSAAVRESTGNVTDADRLPEEMKDMKIQD------DKEMEATIVNGNVTETGH 54

Query: 66  VIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE 125
           +I TTIGGRNG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQD+RYKNRE
Sbjct: 55  IIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRE 114

Query: 126 LQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYV 185
           LQ M++LDHPN+V+LKHCFFSTT+K+ELYLNLVLEYVPETV+R+ ++Y++++QRMPL+YV
Sbjct: 115 LQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLVYV 174

Query: 186 KLYTYQICRALAYIHNCI 203
           KLYTYQI R+L+YIH CI
Sbjct: 175 KLYTYQIFRSLSYIHRCI 192

May mediate extracellular signals to regulate transcription in differentiating cells.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q96287|KSG8_ARATH Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3

 Score =  249 bits (637), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 117/177 (66%), Positives = 148/177 (83%), Gaps = 1/177 (0%)

Query: 28  DWLGREMLEMRLRDQVD-NDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIA 86
           D L   M+EM++RD+ + N ED+D E  +++G G ETG VI TT+GGR+G  KQ +SY+A
Sbjct: 81  DQLPDVMIEMKIRDERNANREDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMA 140

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFS 146
           + VVGTGSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQIM++ DHPN+V L+H FFS
Sbjct: 141 QRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFS 200

Query: 147 TTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
           TTDK+ELYLNLVLEYVPETV R +++Y++++Q MP+I+V+LYTYQICRAL Y+H  +
Sbjct: 201 TTDKDELYLNLVLEYVPETVYRASKHYTKMNQHMPIIFVQLYTYQICRALNYLHRVV 257

May mediate extracellular signals to regulate transcription in differentiating cells.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
449522383	690	PREDICTED: uncharacterized protein LOC10	0.605	0.294	0.935	1e-109
449460309	428	PREDICTED: shaggy-related protein kinase	0.605	0.474	0.935	1e-108
224119932	422	predicted protein [Populus trichocarpa]	0.605	0.481	0.940	1e-107
147833249	435	hypothetical protein VITISV_015513 [Viti	0.826	0.636	0.584	1e-106
224129720	422	predicted protein [Populus trichocarpa]	0.605	0.481	0.935	1e-106
225465185	422	PREDICTED: shaggy-related protein kinase	0.605	0.481	0.935	5e-99
218184901	525	hypothetical protein OsI_34360 [Oryza sa	0.683	0.436	0.608	2e-95
359806970	420	uncharacterized protein LOC100799387 [Gl	0.543	0.433	0.924	4e-94
116787454	424	unknown [Picea sitchensis]	0.605	0.478	0.819	5e-94
359806021	420	uncharacterized protein LOC100820098 [Gl	0.543	0.433	0.891	5e-91

>gi|449522383|ref|XP_004168206.1| PREDICTED: uncharacterized protein LOC101227928 [Cucumis sativus]

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/203 (93%), Positives = 196/203 (96%)

Query: 1   MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVG 60
           MASASLGNGGVGSSRS+NGFK SSSSVDWLGREMLEMRLRD+ D DEDRDSEPDIIDGVG
Sbjct: 7   MASASLGNGGVGSSRSINGFKGSSSSVDWLGREMLEMRLRDKTDTDEDRDSEPDIIDGVG 66

Query: 61  AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
           AE GHVIRTTIGGRNG SKQ +SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR
Sbjct: 67  AEAGHVIRTTIGGRNGQSKQNISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 126

Query: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRM 180
           YKNRELQIMQMLDHPNIV+LKHCFFSTTDKEE+YLNLVLE+VPETVNRIARNYSRI QRM
Sbjct: 127 YKNRELQIMQMLDHPNIVSLKHCFFSTTDKEEVYLNLVLEFVPETVNRIARNYSRISQRM 186

Query: 181 PLIYVKLYTYQICRALAYIHNCI 203
           PLIYVKLYTYQICRALAYIHNCI
Sbjct: 187 PLIYVKLYTYQICRALAYIHNCI 209

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460309|ref|XP_004147888.1| PREDICTED: shaggy-related protein kinase kappa-like [Cucumis sativus]

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/203 (93%), Positives = 196/203 (96%)

Query: 1   MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVG 60
           MASASLGNGGVGSSRS+NGFK SSSSVDWLGREMLEMRLRD+ D DEDRDSEPDIIDGVG
Sbjct: 7   MASASLGNGGVGSSRSINGFKGSSSSVDWLGREMLEMRLRDKTDTDEDRDSEPDIIDGVG 66

Query: 61  AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
           AE GHVIRTTIGGRNG SKQ +SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR
Sbjct: 67  AEAGHVIRTTIGGRNGQSKQNISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 126

Query: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRM 180
           YKNRELQIMQMLDHPNIV+LKHCFFSTTDKEE+YLNLVLE+VPETVNRIARNYSRI QRM
Sbjct: 127 YKNRELQIMQMLDHPNIVSLKHCFFSTTDKEEVYLNLVLEFVPETVNRIARNYSRISQRM 186

Query: 181 PLIYVKLYTYQICRALAYIHNCI 203
           PLIYVKLYTYQICRALAYIHNCI
Sbjct: 187 PLIYVKLYTYQICRALAYIHNCI 209

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224119932|ref|XP_002331098.1| predicted protein [Populus trichocarpa] gi|222872826|gb|EEF09957.1| predicted protein [Populus trichocarpa]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/203 (94%), Positives = 197/203 (97%)

Query: 1   MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVG 60
           M+SASLGNGGVGSSRSVNGFKSSSSS+DWLGREMLEMRLRD+VD+DEDRDSEPDIIDGVG
Sbjct: 1   MSSASLGNGGVGSSRSVNGFKSSSSSMDWLGREMLEMRLRDKVDHDEDRDSEPDIIDGVG 60

Query: 61  AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
           AE GHVIRTTIGGRNG S+Q VSYIAEHVVGTGSFGVV QAKCRETGEIVAIKKVLQDKR
Sbjct: 61  AEAGHVIRTTIGGRNGQSRQTVSYIAEHVVGTGSFGVVVQAKCRETGEIVAIKKVLQDKR 120

Query: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRM 180
           YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSR + RM
Sbjct: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRNNPRM 180

Query: 181 PLIYVKLYTYQICRALAYIHNCI 203
           PLIYVKLYTYQICRALAYIHNCI
Sbjct: 181 PLIYVKLYTYQICRALAYIHNCI 203

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147833249|emb|CAN73053.1| hypothetical protein VITISV_015513 [Vitis vinifera]

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/325 (58%), Positives = 234/325 (72%), Gaps = 48/325 (14%)

Query: 49  RDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGE 108
           R+    +I+G    TGH+I TTIGG+NG  KQ +SY+AE +VGTGSFG+VFQAKC ETGE
Sbjct: 52  REMSAAVIEGNDPVTGHIISTTIGGKNGEPKQTISYMAERIVGTGSFGIVFQAKCLETGE 111

Query: 109 IVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNR 168
            VAIKKVLQD+RYKNRELQ+++++DHPN+V LKHCFFSTT ++EL+LNLV+EYVPET+ R
Sbjct: 112 TVAIKKVLQDRRYKNRELQLLRLMDHPNVVTLKHCFFSTTSRDELFLNLVMEYVPETMYR 171

Query: 169 IARNYSRIHQRMPLIYVKLYTYQI---------C------------RALAYI-------- 199
           + ++YS  +QRMPLIYVKLYTYQ+         C              ++YI        
Sbjct: 172 VLKHYSNANQRMPLIYVKLYTYQVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAP 231

Query: 200 -----------------HNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPW 242
                              C+  +L+ + +VLGTPTREEI+CMNPNYT+F+FPQIK HPW
Sbjct: 232 ELIFGATEYTTSIDIWSAGCVFAELL-LGQVLGTPTREEIRCMNPNYTDFRFPQIKAHPW 290

Query: 243 HKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFN 302
           HKVF KR+PPEA+DL  R  QYSP+LRCTALEAC H FFDELR+PN RLPNGRPLPPLFN
Sbjct: 291 HKVFHKRMPPEALDLASRLLQYSPSLRCTALEACAHSFFDELREPNARLPNGRPLPPLFN 350

Query: 303 FKPPELSGIPPETINRLIPEHARKQ 327
           FK  EL+   PE ++RLIPEH R+Q
Sbjct: 351 FK-QELAAASPELLHRLIPEHVRRQ 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129720|ref|XP_002328786.1| predicted protein [Populus trichocarpa] gi|222839084|gb|EEE77435.1| predicted protein [Populus trichocarpa]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/203 (93%), Positives = 196/203 (96%)

Query: 1   MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVG 60
           M+SASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRD+VD+DEDRDSEPDIIDGVG
Sbjct: 1   MSSASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDKVDHDEDRDSEPDIIDGVG 60

Query: 61  AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
           AE GHVIRTTIGGRNG S+Q +SYIAEHVVGTGSFGVV QAKCRETGEIVAIKKVLQDKR
Sbjct: 61  AEAGHVIRTTIGGRNGQSRQTISYIAEHVVGTGSFGVVVQAKCRETGEIVAIKKVLQDKR 120

Query: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRM 180
           YKNRELQIMQMLDHPNIVALKH FFSTTDKEELYLNLVLEYVP+TVNRIARNYSR  QRM
Sbjct: 121 YKNRELQIMQMLDHPNIVALKHSFFSTTDKEELYLNLVLEYVPDTVNRIARNYSRNSQRM 180

Query: 181 PLIYVKLYTYQICRALAYIHNCI 203
           PLIYVKLYTYQICRALAYIHNCI
Sbjct: 181 PLIYVKLYTYQICRALAYIHNCI 203

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465185|ref|XP_002263398.1| PREDICTED: shaggy-related protein kinase kappa [Vitis vinifera] gi|297739515|emb|CBI29697.3| unnamed protein product [Vitis vinifera]

 Score =  367 bits (942), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 190/203 (93%), Positives = 196/203 (96%)

Query: 1   MASASLGNGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVG 60
           MASASLG+GGVGSSR+ NGFK SSSSVDWLGREMLEMRLRD+VD D+DRDSEPDIIDGVG
Sbjct: 1   MASASLGHGGVGSSRTANGFKGSSSSVDWLGREMLEMRLRDRVDQDDDRDSEPDIIDGVG 60

Query: 61  AETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120
           AE GHVIRTT GGRNG SKQ VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR
Sbjct: 61  AEAGHVIRTTFGGRNGQSKQTVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR 120

Query: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRM 180
           YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE+VPETVNRIARNYSRI+QRM
Sbjct: 121 YKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEFVPETVNRIARNYSRINQRM 180

Query: 181 PLIYVKLYTYQICRALAYIHNCI 203
           PLIYVKLYTYQICRALAYIHNCI
Sbjct: 181 PLIYVKLYTYQICRALAYIHNCI 203

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218184901|gb|EEC67328.1| hypothetical protein OsI_34360 [Oryza sativa Indica Group]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 171/281 (60%), Positives = 199/281 (70%), Gaps = 52/281 (18%)

Query: 98  VFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL 157
            +QAKC ETGE VAIKKVLQDKRYKNRELQ MQ+LDHPN+V LKH FFSTT++ E+YLNL
Sbjct: 245 AYQAKCLETGETVAIKKVLQDKRYKNRELQTMQLLDHPNVVQLKHHFFSTTERGEVYLNL 304

Query: 158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------- 203
           VLEYV ETV R+A+ Y+R++QR+P+++VKLY YQICRALAYIH  +              
Sbjct: 305 VLEYVSETVYRVAKYYNRMNQRVPILHVKLYAYQICRALAYIHRVVGVWHRDIKPQNLRA 364

Query: 204 --------------------------------------VDQLVEIIKVLGTPTREEIKCM 225
                                                 VDQLVEIIK+LGTPTREEI+CM
Sbjct: 365 PELIFGATEYTTAIDIWSVGCVLAELLIGQPLFPGESGVDQLVEIIKILGTPTREEIRCM 424

Query: 226 NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
           NPNY+EFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLRCTA++AC HPFFDELR
Sbjct: 425 NPNYSEFKFPQIKAHPWHKLFGKRMPPEAVDLVSRLLQYSPNLRCTAVDACAHPFFDELR 484

Query: 286 DPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARK 326
           DP T L NGR LPPLF+F   EL G+P E ++R+IPEH RK
Sbjct: 485 DPKTCLSNGRSLPPLFDFSAAELEGLPVELVHRIIPEHMRK 525

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806970|ref|NP_001241073.1| uncharacterized protein LOC100799387 [Glycine max] gi|255641011|gb|ACU20785.1| unknown [Glycine max]

 Score =  350 bits (899), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 171/185 (92%), Positives = 177/185 (95%), Gaps = 3/185 (1%)

Query: 19  GFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNS 78
           GF+ SSSSVDWLGREMLEMRLRD  D   DRDSEPDIIDGVGAETGHVIRT+IGGRNG S
Sbjct: 20  GFRGSSSSVDWLGREMLEMRLRDHED---DRDSEPDIIDGVGAETGHVIRTSIGGRNGQS 76

Query: 79  KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIV 138
           KQ VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIV
Sbjct: 77  KQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIV 136

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           AL+HCFFSTTDKEE+YLNLVLEYVPETVNRIAR+YSRI+QRMPLIYVKLYTYQICRALAY
Sbjct: 137 ALRHCFFSTTDKEEVYLNLVLEYVPETVNRIARSYSRINQRMPLIYVKLYTYQICRALAY 196

Query: 199 IHNCI 203
           IHNCI
Sbjct: 197 IHNCI 201

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116787454|gb|ABK24513.1| unknown [Picea sitchensis]

 Score =  350 bits (898), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 168/205 (81%), Positives = 190/205 (92%), Gaps = 2/205 (0%)

Query: 1   MASASLG-NGGVGSSRSVNGFKSSSSSVDWLGREMLEMRLRD-QVDNDEDRDSEPDIIDG 58
           MASASLG +GGVGSSR++N  K   +SVDWLGREMLEMR+RD ++D D+++D EP I+DG
Sbjct: 1   MASASLGHSGGVGSSRTINRLKGPVNSVDWLGREMLEMRIRDNKLDVDDEKDIEPAIVDG 60

Query: 59  VGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD 118
           +GAE+GH+I TTIGGRNG  KQ +SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD
Sbjct: 61  MGAESGHIIATTIGGRNGQPKQTISYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD 120

Query: 119 KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ 178
           KRYKNRELQIM MLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIAR+Y+R++Q
Sbjct: 121 KRYKNRELQIMHMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARHYNRMNQ 180

Query: 179 RMPLIYVKLYTYQICRALAYIHNCI 203
           RMPLIYVKLY+YQICR+LAYIHNC+
Sbjct: 181 RMPLIYVKLYSYQICRSLAYIHNCV 205

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806021|ref|NP_001240918.1| uncharacterized protein LOC100820098 [Glycine max] gi|255639602|gb|ACU20095.1| unknown [Glycine max]

 Score =  340 bits (873), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 165/185 (89%), Positives = 175/185 (94%), Gaps = 3/185 (1%)

Query: 19  GFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNS 78
           GF+ SSSSVDWLGREMLEM LRD  D    RDSEPDIIDG+GAETGHVIRT++GGRNG S
Sbjct: 20  GFRGSSSSVDWLGREMLEMSLRDHEDV---RDSEPDIIDGLGAETGHVIRTSVGGRNGQS 76

Query: 79  KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIV 138
           KQ VSYI+EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIV
Sbjct: 77  KQNVSYISEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIV 136

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           AL+HCF+STTDKEE+YLNLVLEYVPETVNRIAR+YSRI+QRMPLIYVKLYTYQICRALAY
Sbjct: 137 ALRHCFYSTTDKEEVYLNLVLEYVPETVNRIARSYSRINQRMPLIYVKLYTYQICRALAY 196

Query: 199 IHNCI 203
           IHNCI
Sbjct: 197 IHNCI 201

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2024341	421	SK41 "shaggy-like protein kina	0.394	0.313	0.946	8.1e-140
TAIR|locus:2832141	405	SK 11 "AT5G26751" [Arabidopsis	0.510	0.422	0.627	8.9e-113
TAIR|locus:2222642	410	SK13 "shaggy-like kinase 13" [	0.388	0.317	0.815	1.8e-112
TAIR|locus:2074464	409	ATSK12 [Arabidopsis thaliana (	0.388	0.317	0.792	1.3e-111
TAIR|locus:2052861	412	SKdZeta "SHAGGY-related protei	0.367	0.298	0.814	7.2e-107
TAIR|locus:2126993	472	SK32 "shaggy-like protein kina	0.525	0.372	0.587	1.5e-106
TAIR|locus:2202255	407	GSK1 "GSK3/SHAGGY-like protein	0.367	0.302	0.798	4.5e-105
TAIR|locus:2124082	380	BIN2 "BRASSINOSTEROID-INSENSIT	0.367	0.323	0.741	1.7e-103
TAIR|locus:2098896	438	AT3G61160 [Arabidopsis thalian	0.367	0.280	0.707	2.6e-94
UNIPROTKB|E2R4Y4	420	GSK3B "Uncharacterized protein	0.364	0.290	0.696	2.2e-76

TAIR|locus:2024341 SK41 "shaggy-like protein kinase 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 702 (252.2 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
 Identities = 125/132 (94%), Positives = 129/132 (97%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL+CRFFQ
Sbjct:   290 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQ 349

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSPNLRCTALEAC+HP FDELRDPNTRLPNGRPLPPLFNFKP ELSGIPPE +NRL+PEH
Sbjct:   350 YSPNLRCTALEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEH 409

Query:   324 ARKQNLFMALHS 335
             ARKQNLFMALHS
Sbjct:   410 ARKQNLFMALHS 421

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2832141 SK 11 "AT5G26751" [Arabidopsis thaliana (taxid:3702)]

 Score = 574 (207.1 bits), Expect = 8.9e-113, Sum P(2) = 8.9e-113
 Identities = 111/177 (62%), Positives = 136/177 (76%)

Query:    27 VDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIA 86
             VD L  EM +M++RD      D++ E  ++DG G ETGH+I TTIGGRNG  KQ +SY+A
Sbjct:    18 VDKLPEEMNDMKIRD------DKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMA 71

Query:    87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFS 146
             E VVG GSFGVVFQAKC ETGE VAIKKVLQD+RYKNRELQ M++LDHPN+V+LKHCFFS
Sbjct:    72 ERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFS 131

Query:   147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
             TT+K              TV+R+ ++Y++++QRMPLIYVKLYTYQI RAL+YIH CI
Sbjct:   132 TTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCI 188

GO:0004672 "protein kinase activity" evidence=ISS;IDA

GO:0005634 "nucleus" evidence=ISM

GO:0009933 "meristem structural organization" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:0016310 "phosphorylation" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2222642 SK13 "shaggy-like kinase 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 573 (206.8 bits), Expect = 1.8e-112, Sum P(2) = 1.8e-112
 Identities = 106/130 (81%), Positives = 113/130 (86%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR PPEAVDLV R  Q
Sbjct:   281 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRTPPEAVDLVSRLLQ 340

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSPNLR TA+EA VHPFFDELRDPNTRLPNGR LPPLFNFKP EL G   E +++LIP+H
Sbjct:   341 YSPNLRSTAMEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDH 400

Query:   324 ARKQNLFMAL 333
             ARKQ  F+AL
Sbjct:   401 ARKQCSFLAL 410

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006972 "hyperosmotic response" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2074464 ATSK12 [Arabidopsis thaliana (taxid:3702)]

 Score = 572 (206.4 bits), Expect = 1.3e-111, Sum P(2) = 1.3e-111
 Identities = 103/130 (79%), Positives = 114/130 (87%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEAVDLV R  Q
Sbjct:   280 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQ 339

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSPNLRC AL++ VHPFFDELRDPN RLPNGR LPPLFNFKP EL G+P E + +L+PEH
Sbjct:   340 YSPNLRCAALDSLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEH 399

Query:   324 ARKQNLFMAL 333
             ARKQ  +++L
Sbjct:   400 ARKQCPWLSL 409

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009933 "meristem structural organization" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0016310 "phosphorylation" evidence=IDA

TAIR|locus:2052861 SKdZeta "SHAGGY-related protein kinase dZeta" [Arabidopsis thaliana (taxid:3702)]

 Score = 563 (203.2 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
 Identities = 101/124 (81%), Positives = 110/124 (88%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTREEI+CMNPNYT+F+FPQIK HPWHKVF KR+PPEA+DL  R  Q
Sbjct:   279 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 338

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSP+LRCTALEAC HPFF+ELR+PN RLPNGRPLPPLFNFK  ELSG  PE INRLIPEH
Sbjct:   339 YSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFKQ-ELSGASPELINRLIPEH 397

Query:   324 ARKQ 327
              R+Q
Sbjct:   398 VRRQ 401

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IPI

GO:0032880 "regulation of protein localization" evidence=RCA;IDA

TAIR|locus:2126993 SK32 "shaggy-like protein kinase 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 545 (196.9 bits), Expect = 1.5e-106, Sum P(2) = 1.5e-106
 Identities = 104/177 (58%), Positives = 134/177 (75%)

Query:    28 DWLGREMLEMRLRDQVD-NDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIA 86
             D L   M+EM++RD+ + N ED+D E  +++G G ETG VI TT+GGR+G  KQ +SY+A
Sbjct:    81 DQLPDVMIEMKIRDERNANREDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMA 140

Query:    87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFS 146
             + VVGTGSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQIM++ DHPN+V L+H FFS
Sbjct:   141 QRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFS 200

Query:   147 TTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI 203
             TTDK              TV R +++Y++++Q MP+I+V+LYTYQICRAL Y+H  +
Sbjct:   201 TTDKDELYLNLVLEYVPETVYRASKHYTKMNQHMPIIFVQLYTYQICRALNYLHRVV 257

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS;IDA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2202255 GSK1 "GSK3/SHAGGY-like protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 4.5e-105, Sum P(2) = 4.5e-105
 Identities = 99/124 (79%), Positives = 108/124 (87%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTREEI+CMNPNYT+F+FPQIK HPWHKVF KR+PPEA+DL  R  Q
Sbjct:   277 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 336

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSP+LRCTALEAC HPFF+ELR+PN RLPNGRPLPPLFNFK  EL G   E INRLIPEH
Sbjct:   337 YSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFKQ-ELGGASMELINRLIPEH 395

Query:   324 ARKQ 327
              R+Q
Sbjct:   396 VRRQ 399

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IPI

GO:0032880 "regulation of protein localization" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0051049 "regulation of transport" evidence=RCA

TAIR|locus:2124082 BIN2 "BRASSINOSTEROID-INSENSITIVE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 536 (193.7 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
 Identities = 92/124 (74%), Positives = 108/124 (87%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTREEI+CMNP+YT+F+FPQIK HPWHK+F KR+PPEA+D   R  Q
Sbjct:   247 VDQLVEIIKVLGTPTREEIRCMNPHYTDFRFPQIKAHPWHKIFHKRMPPEAIDFASRLLQ 306

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSP+LRCTALEAC HPFFDELR+PN RLPNGRP PPLFNFK  E++G  PE +N+LIP+H
Sbjct:   307 YSPSLRCTALEACAHPFFDELREPNARLPNGRPFPPLFNFKQ-EVAGSSPELVNKLIPDH 365

Query:   324 ARKQ 327
              ++Q
Sbjct:   366 IKRQ 369

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IPI

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009729 "detection of brassinosteroid stimulus" evidence=IMP

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0009733 "response to auxin stimulus" evidence=IMP

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0046827 "positive regulation of protein export from nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

GO:0009651 "response to salt stress" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2098896 AT3G61160 [Arabidopsis thaliana (taxid:3702)]

 Score = 480 (174.0 bits), Expect = 2.6e-94, Sum P(2) = 2.6e-94
 Identities = 87/123 (70%), Positives = 99/123 (80%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIK+LGTP REEIK MNP Y +FKFPQIK  PWHK+F++++ PEA+DL  R  Q
Sbjct:   316 VDQLVEIIKILGTPAREEIKNMNPRYNDFKFPQIKAQPWHKIFRRQVSPEAMDLASRLLQ 375

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
             YSPNLRCTALEAC HPFFD+LRDP   LPNGR LPPLF+F   EL+G   E  +RLIPEH
Sbjct:   376 YSPNLRCTALEACAHPFFDDLRDPRASLPNGRALPPLFDFTAQELAGASVELRHRLIPEH 435

Query:   324 ARK 326
             ARK
Sbjct:   436 ARK 438

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

UNIPROTKB|E2R4Y4 GSK3B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 440 (159.9 bits), Expect = 2.2e-76, Sum P(2) = 2.2e-76
 Identities = 87/125 (69%), Positives = 94/125 (75%)

Query:   204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
             VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct:   263 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 322

Query:   264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
             Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct:   323 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 380

Query:   323 HARKQ 327
             HAR Q
Sbjct:   381 HARIQ 385

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39019	KSG10_ARATH	2, ., 7, ., 1, 1, ., 1	0.8059	0.5970	0.4750	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.991
3rd Layer	2.7.11	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	335
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-38
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	1e-31
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-27
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-26
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	7e-24
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-22
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-20
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-20
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	8e-20
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-19
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	1e-18
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-18
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-17
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-17
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-16
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-16
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-16
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	6e-16
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-16
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	7e-16
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-15
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-15
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-15
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-14
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-14
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-14
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-14
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-14
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-13
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-13
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-13
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-13
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	6e-13
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	8e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	1e-12
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-12
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-12
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	3e-12
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-12
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	4e-12
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-12
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-12
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-12
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	6e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	9e-12
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	1e-11
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-11
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-11
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-11
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-11
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-11
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	5e-11
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	8e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	9e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-10
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-10
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-10
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-10
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-10
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-10
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-09
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-09
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-09
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-09
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	3e-09
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	4e-09
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	4e-09
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	4e-09
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	5e-09
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-09
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	8e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-08
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-08
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-08
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-08
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	1e-08
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-08
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-08
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-08
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-08
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	3e-08
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-08
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-08
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-08
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-08
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	6e-08
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	8e-08
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	8e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	8e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-07
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	4e-07
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-07
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	5e-07
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	7e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	8e-07
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	9e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	9e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	9e-07
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	9e-07
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-07
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	9e-07
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-06
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	2e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-06
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	2e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	3e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-06
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	3e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	4e-06
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-06
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	5e-06
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	6e-06
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	9e-06
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	1e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-05
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-05
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	4e-05
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	4e-05
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	6e-05
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	7e-05
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-04
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	1e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-04
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	2e-04
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-04
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	3e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-04
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	3e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-04
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	4e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-04
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	5e-04
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	5e-04
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	8e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	8e-04
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	8e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-04
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	8e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	8e-04
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.001
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.001
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.001
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.001
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.002
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	0.002
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.002
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.002
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.002
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.002
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	0.002
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.002
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.002
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	0.003
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.003
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.003
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	0.003
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	0.004
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.004
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.004
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.004
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	0.004

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  140 bits (354), Expect = 3e-38
 Identities = 62/128 (48%), Positives = 95/128 (74%), Gaps = 3/128 (2%)

Query: 77  NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPN 136
           N     SY   +++G GSFGVV++A C +T E VAIKKVLQD +YKNREL IM+ L+H N
Sbjct: 61  NRSPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHIN 120

Query: 137 IVALKHCFFSTT---DKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           I+ LK  +++     +++ ++LN+V+E++P+TV++  ++Y+R +  +PL  VKLY+YQ+C
Sbjct: 121 IIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLC 180

Query: 194 RALAYIHN 201
           RALAYIH+
Sbjct: 181 RALAYIHS 188

Length = 440

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  122 bits (307), Expect = 1e-31
 Identities = 55/120 (45%), Positives = 75/120 (62%), Gaps = 1/120 (0%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLV II+VLGTPT +++K MNPNY + KFP +KP    KVF K  P +A++ + +F +
Sbjct: 277 VDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK 336

Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNG-RPLPPLFNFKPPELSGIPPETINRLIPE 322
           Y P  R   +EA   PFFD+LRDP  +LP     LP LFNF   E+  +      ++IP+
Sbjct: 337 YEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDAEIKEMSDACRRKIIPK 396

Length = 440

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  106 bits (266), Expect = 8e-27
 Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 18/129 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIV 138
           Y     +G GSFG V+ A+ ++TG++VAIK +      +D+    RE++I++ L HPNIV
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIV 60

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
            L   F    D+++LY  LV+EY    +  + + +       R+     + Y  QI  AL
Sbjct: 61  RLYDVF---EDEDKLY--LVMEYCEGGDLFDLLKK-----RGRLSEDEARFYLRQILSAL 110

Query: 197 AYIH-NCIV 204
            Y+H   IV
Sbjct: 111 EYLHSKGIV 119

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  104 bits (262), Expect = 3e-26
 Identities = 64/270 (23%), Positives = 99/270 (36%), Gaps = 82/270 (30%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     +G+GSFG V++AK + TG+IVA+K + +            RE++I++ L HPNI
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L   F    DK+ LY  LV+EY          +Y      +     K    QI R L 
Sbjct: 61  VRLIDAF---EDKDHLY--LVMEYCEGGDL---FDYLSRGGPLSEDEAKKIALQILRGLE 112

Query: 198 YIH------------NCIVDQLVEIIKV-------------------LGTPTR---EEIK 223
           Y+H            N ++D+   ++K+                   +GTP     E + 
Sbjct: 113 YLHSNGIIHRDLKPENILLDE-NGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLL 171

Query: 224 CMNPNYT------------------EFKFPQIKPHPWHKVFQKRLPPE------------ 253
                Y                   +  F         ++ ++ L P             
Sbjct: 172 -GGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGS 230

Query: 254 --AVDLVCRFFQYSPNLRCTALEACVHPFF 281
             A DL+ +     P+ R TA E   HP+F
Sbjct: 231 EEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 98.0 bits (245), Expect = 7e-24
 Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 15/125 (12%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN-----RELQIMQMLDHPNIVALK 141
            ++G GSFG V+ A  ++TGE++A+K V L     +      RE++I+  L HPNIV   
Sbjct: 6   ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIV--- 62

Query: 142 HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             + S  D+E+  LN+ LEYV   +++ + + + ++ + +    ++ YT QI   LAY+H
Sbjct: 63  RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPV----IRKYTRQILEGLAYLH 118

Query: 201 -NCIV 204
            N IV
Sbjct: 119 SNGIV 123

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 95.5 bits (238), Expect = 1e-22
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 14/119 (11%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKVLQ---DKRYKN---RELQIMQMLDHPNIVALK 141
            VVG G++GVV + + + TGEIVAIKK  +   D+  K    RE+++++ L H NIV LK
Sbjct: 7   GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLK 66

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             F     K  LY  LV EYV  T+  +          +P   V+ Y +Q+ +A+AY H
Sbjct: 67  EAFRR---KGRLY--LVFEYVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 89.3 bits (222), Expect = 2e-20
 Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 21/132 (15%)

Query: 80  QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR---YKN---RELQIMQMLD 133
           QK+  I     G G++GVV++A+ + TGEIVAIKK+              RE+++++ L+
Sbjct: 2   QKLGKI-----GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN 56

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           HPNI+ L   F     K +LY  LV E++   + ++ ++  R    +P   +K Y YQ+ 
Sbjct: 57  HPNIIKLLDVFR---HKGDLY--LVFEFMDTDLYKLIKDRQRG---LPESLIKSYLYQLL 108

Query: 194 RALAYIH--NCI 203
           + LA+ H    +
Sbjct: 109 QGLAFCHSHGIL 120

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 86.5 bits (215), Expect = 4e-20
 Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 14/119 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVALKHCF 144
           +G G FG V+ A+ ++TG+ VAIK + ++          RE++I++ L+HPNIV L   F
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF 60

Query: 145 FSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
                ++E +L LV+EY    ++  + +       ++    +     QI   L Y+H+ 
Sbjct: 61  -----EDENHLYLVMEYCEGGSLKDLLKENEG---KLSEDEILRILLQILEGLEYLHSN 111

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 87.5 bits (218), Expect = 8e-20
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 21/131 (16%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHP 135
           Y     +G G++GVV++A+ ++TGEIVA+KK+  D   +         RE+ +++ L HP
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLD--NEEEGIPSTALREISLLKELKHP 58

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNY-SRIHQRMPLIYVKLYTYQICR 194
           NIV L     +   + +LY  LV EY    +    + Y  +    +    +K   YQ+ R
Sbjct: 59  NIVKLLDVIHT---ERKLY--LVFEYCDMDL----KKYLDKRPGPLSPNLIKSIMYQLLR 109

Query: 195 ALAYIH-NCIV 204
            LAY H + I+
Sbjct: 110 GLAYCHSHRIL 120

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 87.6 bits (218), Expect = 1e-19
 Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 18/127 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y     +G+G++GVV  A  + TG  VAIKK+      L D +   RE+++++ L H NI
Sbjct: 2   YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI 61

Query: 138 VALKHCF--FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL--IYVKLYTYQIC 193
           + L       S  D  ++Y  +V E +   ++++      I    PL   +++ + YQI 
Sbjct: 62  IGLLDILRPPSPEDFNDVY--IVTELMETDLHKV------IKSPQPLTDDHIQYFLYQIL 113

Query: 194 RALAYIH 200
           R L Y+H
Sbjct: 114 RGLKYLH 120

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDH 134
           Y     +G G++ VV++A+ +ETG IVAIKK+   +R +          RE++++Q L H
Sbjct: 2   YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH 61

Query: 135 PNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           PNI+ L   F          +NLV E++   + ++ ++ S +        +K Y     R
Sbjct: 62  PNIIGLLDVF--GHKS---NINLVFEFMETDLEKVIKDKSIVLT---PADIKSYMLMTLR 113

Query: 195 ALAYIHNC 202
            L Y+H+ 
Sbjct: 114 GLEYLHSN 121

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 81.4 bits (202), Expect = 7e-18
 Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 12/124 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y     +G GSFG V+  + +  G++  +K++       +++     E++I++ L+HPNI
Sbjct: 2   YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI 61

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           +     F     +E+  L +V+EY     +++  +   +  +  P   +  +  Q+C AL
Sbjct: 62  IKYYESF-----EEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLAL 116

Query: 197 AYIH 200
            Y+H
Sbjct: 117 KYLH 120

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G+ G+VF+AK RETGE VA+KKV   +          RE++ +Q   HP +V L   
Sbjct: 8   IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDV 67

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           F            LV+EY+P  ++ + R+  R    +P   VK Y   + + +AY+H 
Sbjct: 68  F---PHGSGFV--LVMEYMPSDLSEVLRDEER---PLPEAQVKSYMRMLLKGVAYMHA 117

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 79.5 bits (197), Expect = 5e-17
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 17/119 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQ-IMQMLDHPNIVALK 141
           +G G+FG V+ A+ +ETGE+VAIKK+ +  ++ +       RE++ + ++ +HPNIV LK
Sbjct: 7   LGDGTFGSVYLARNKETGELVAIKKMKK--KFYSWEECMNLREVKSLRKLNEHPNIVKLK 64

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             F    + +ELY   V EY+   + ++ +   R  +      ++   YQI + LA+IH
Sbjct: 65  EVF---RENDELY--FVFEYMEGNLYQLMK--DRKGKPFSESVIRSIIYQILQGLAHIH 116

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 79.1 bits (196), Expect = 1e-16
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I++VLGTP+ E++K + +     +    P+    P  K+F     PEA+DL+ +
Sbjct: 213 IDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPG-ASPEAIDLLEK 271

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELS 309
              + P  R TA EA  HP+  +L DP    P  +P      F   EL+
Sbjct: 272 MLVFDPKKRITADEALAHPYLAQLHDPE-DEPVAKPPFDFDFFDDDELT 319

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 78.3 bits (193), Expect = 1e-16
 Identities = 72/295 (24%), Positives = 110/295 (37%), Gaps = 106/295 (35%)

Query: 80  QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLD 133
           QKV  I E     G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+
Sbjct: 3   QKVEKIGE-----GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 57

Query: 134 HPNIVALKHC--------------------FFSTTDKEELYLNLVLEYVPETVNRIARNY 173
           HPNIV L                       F   +    + L L+  Y+ + +  +A  +
Sbjct: 58  HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH 117

Query: 174 SR--IHQRMP----LI----YVKLYTYQICRAL-----AYIHN----------------- 201
           S   +H+ +     LI     +KL  + + RA       Y H                  
Sbjct: 118 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 177

Query: 202 -----------CI----------------VDQLVEIIKVLGTPTREEIKCMNPNYTEFK- 233
                      CI                +DQL  I + LGTP       + P  T    
Sbjct: 178 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEV----VWPGVTSLPD 233

Query: 234 ----FPQIKPHPWHKVFQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFF 281
               FP+         F K +PP   +  DL+ +   Y PN R +A  A  HPFF
Sbjct: 234 YKPSFPKWARQD----FSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 77.6 bits (192), Expect = 3e-16
 Identities = 36/120 (30%), Positives = 63/120 (52%), Gaps = 14/120 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
           +G G++G V++A+ ++TGE+VA+KK+  +   K        RE++++Q L HPNIV LK 
Sbjct: 7   IGEGTYGQVYKARNKKTGELVALKKIRME-NEKEGFPITAIREIKLLQKLRHPNIVRLKE 65

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
              S   K  +Y  +V EY+   +  +  +      +     +K Y  Q+   L Y+H+ 
Sbjct: 66  IVTS-KGKGSIY--MVFEYMDHDLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN 119

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 76.1 bits (188), Expect = 5e-16
 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 13/119 (10%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQMLDHPNIVALKHC 143
             +G G FG V++A+ + TG+ VAIK + L+ K  K     E+QI++   HPNIV     
Sbjct: 6   EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGS 65

Query: 144 FFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           +     K+EL+  +V+E+    ++  + ++    +Q +    +     ++ + L Y+H+
Sbjct: 66  YL---KKDELW--IVMEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHS 116

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 76.1 bits (188), Expect = 6e-16
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 16/120 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN-----RELQIMQMLDHPNIVALKH 142
           ++G G+FGVV++    ETG+ VAIK++ L+  + +      +E+ +++ L HPNIV    
Sbjct: 7   LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIG 66

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
                  +    L ++LEY    ++ +I + +    + +    V +Y YQ+ + LAY+H 
Sbjct: 67  SI-----ETSDSLYIILEYAENGSLRQIIKKFGPFPESL----VAVYVYQVLQGLAYLHE 117

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 76.0 bits (188), Expect = 6e-16
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 21/130 (16%)

Query: 87  EHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
              +G G+FG V++   +         VA+K + +D   +      RE +IM+ LDHPNI
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNI 63

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRA 195
           V L       T++E L   +V+EY+P        +Y R ++   L    L  +  QI R 
Sbjct: 64  VKLLGV---CTEEEPLM--IVMEYMP---GGDLLDYLRKNRPKELSLSDLLSFALQIARG 115

Query: 196 LAYIH--NCI 203
           + Y+   N I
Sbjct: 116 MEYLESKNFI 125

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 76.4 bits (189), Expect = 7e-16
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 19/123 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYK--NRELQIMQMLDHPNIVALK 141
            +GTGSFG V   + + +G+  A+K     K+++ K+ +    E +I+Q + HP +V L 
Sbjct: 8   TLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLY 67

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
             F     +++  L LV+EYVP  E  + + ++      R P    + Y  Q+  AL Y+
Sbjct: 68  GSF-----QDDSNLYLVMEYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYL 117

Query: 200 HNC 202
           H+ 
Sbjct: 118 HSL 120

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 75.3 bits (186), Expect = 1e-15
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 21/131 (16%)

Query: 89  VVGTGSFGVVFQAKCR---ETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVAL 140
            +G G+FG V++ K +        VA+K + +D   + R     E ++M+ L HPN+V L
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL 61

Query: 141 KHCFFSTTDKEELYLNLVLEYVPE----TVNRIARNYSRIHQRMPLIYVKL--YTYQICR 194
                  T++E LY  LVLEY+         R +R      ++  L    L  +  QI +
Sbjct: 62  LGV---CTEEEPLY--LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAK 116

Query: 195 ALAYIH--NCI 203
            + Y+     +
Sbjct: 117 GMEYLASKKFV 127

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 74.9 bits (185), Expect = 1e-15
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 20/129 (15%)

Query: 87  EHVVGTGSFGVVFQAKCRE----TGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
              +G G+FG V++ K +         VA+K + +D   +      RE +IM+ LDHPN+
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNV 63

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
           V L       T++E LY  +V+EY+         +Y R ++ ++ L  +  +  QI R +
Sbjct: 64  VKLLGV---CTEEEPLY--IVMEYME---GGDLLSYLRKNRPKLSLSDLLSFALQIARGM 115

Query: 197 AYIH--NCI 203
            Y+   N I
Sbjct: 116 EYLESKNFI 124

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 18/123 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHC 143
           +G GS+GVVF+ + RETG+IVAIKK ++       K+   RE+++++ L HPN+V L   
Sbjct: 9   IGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEV 68

Query: 144 FFSTTDKEELYLNLVLEYVPETV-NRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH-- 200
           F     + +  L+LV EY   TV N + +N     + +P   +K   +Q  +A+ + H  
Sbjct: 69  F-----RRKRKLHLVFEYCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKH 119

Query: 201 NCI 203
           NCI
Sbjct: 120 NCI 122

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 72.5 bits (179), Expect = 1e-14
 Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 10/86 (11%)

Query: 201 NCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFK-----FPQIKPHPWHKVFQKRLPPEAV 255
           +  +DQL +I ++LGTPT E      P  T+       FP+  P    KV   RL PE +
Sbjct: 202 DSEIDQLFKIFQILGTPTEESW----PGVTKLPDYKPTFPKFPPKDLEKVL-PRLDPEGI 256

Query: 256 DLVCRFFQYSPNLRCTALEACVHPFF 281
           DL+ +  QY+P  R +A EA  HP+F
Sbjct: 257 DLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 16/128 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KR-YKNRELQIMQMLDHP 135
           Y     VG+G++G V  A   +TG  VAIKK+ +        KR Y  REL++++ +DH 
Sbjct: 17  YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTY--RELRLLKHMDHE 74

Query: 136 NIVALKHCFFSTTDKEELY-LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           N++ L   F   +  E+   + LV   +   +N I +      Q++   +++   YQI R
Sbjct: 75  NVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVK-----CQKLSDDHIQFLVYQILR 129

Query: 195 ALAYIHNC 202
            L YIH+ 
Sbjct: 130 GLKYIHSA 137

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 16/127 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLD-HP 135
           +    ++G GSF  V  AK +ET +  AIK     +++++K+  Y   E +++  L+ HP
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
            I+ L + F    D+E LY   VLEY P   N     Y R +  +     + Y  +I  A
Sbjct: 63  GIIKLYYTF---QDEENLY--FVLEYAP---NGELLQYIRKYGSLDEKCTRFYAAEILLA 114

Query: 196 LAYIHNC 202
           L Y+H+ 
Sbjct: 115 LEYLHSK 121

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 70.6 bits (174), Expect = 4e-14
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 19/121 (15%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQMLDHPNIVALKH 142
           +G GSFG V   + ++TG++ A+K     K+++ K   +   E  I+  ++HP IV L H
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL-H 59

Query: 143 CFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             F T +K    L LVLEY P  E  + +++       R      + Y  +I  AL Y+H
Sbjct: 60  YAFQTEEK----LYLVLEYAPGGELFSHLSK-----EGRFSEERARFYAAEIVLALEYLH 110

Query: 201 N 201
           +
Sbjct: 111 S 111

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 70.6 bits (174), Expect = 4e-14
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 20/127 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGE----IVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVA 139
            +G G+FG V++   +  GE     VA+K + +    +       E  IM+ L HPNIV 
Sbjct: 6   KLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVR 65

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
           L       T  E LY  +V EY+P        ++ R H +++ L  +     QI + + Y
Sbjct: 66  LLGVC---TQGEPLY--IVTEYMP---GGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEY 117

Query: 199 IH--NCI 203
           +   N +
Sbjct: 118 LESKNFV 124

Length = 258

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 70.6 bits (173), Expect = 6e-14
 Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 24/135 (17%)

Query: 82  VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV--------LQDKRYK------NRELQ 127
             ++   ++G G++G V+ A    TGE++A+K+V          D R K        E++
Sbjct: 1   FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIE 60

Query: 128 IMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVK 186
            ++ LDH NIV          +  E YL++ LEYVP  ++    R Y R  +++    V+
Sbjct: 61  TLKDLDHLNIVQYLGF-----ETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQL----VR 111

Query: 187 LYTYQICRALAYIHN 201
            +T Q+   LAY+H+
Sbjct: 112 FFTEQVLEGLAYLHS 126

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 69.7 bits (171), Expect = 2e-13
 Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 15/126 (11%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKK------VLQDKRYKNRELQIMQMLDHPN 136
            Y     +G+G++GVV  A    +G+ VAIKK      V    +   REL+I++   H N
Sbjct: 6   RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDN 65

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLI--YVKLYTYQICR 194
           I+A++         +   + +V++ +   ++ I      IH   PL   +++ + YQ+ R
Sbjct: 66  IIAIRD-ILRPPGADFKDVYVVMDLMESDLHHI------IHSDQPLTEEHIRYFLYQLLR 118

Query: 195 ALAYIH 200
            L YIH
Sbjct: 119 GLKYIH 124

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 68.1 bits (167), Expect = 4e-13
 Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           ++QL  + + LGTP  E    +  + P+Y +  FP+ KP P  ++F     PEA+DL+  
Sbjct: 207 IEQLAIVFRTLGTPNEETWPGLTSL-PDYNKITFPESKPIPLEEIFPD-ASPEALDLLKG 264

Query: 261 FFQYSPNLRCTALEACVHPFF 281
              Y P+ R +A EA  HP+F
Sbjct: 265 LLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALK 141
           + +G G++G+V++A+   +GEIVA+KKV  D           RE+ ++  L HPNIV LK
Sbjct: 13  NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELK 72

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
                   K    + LV+EY  + +  +  N            VK    Q+ R L Y+H 
Sbjct: 73  EV---VVGKHLDSIFLVMEYCEQDLASLLDNMPT---PFSESQVKCLMLQLLRGLQYLHE 126

Query: 201 NCIV 204
           N I+
Sbjct: 127 NFII 130

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 67.8 bits (166), Expect = 5e-13
 Identities = 36/125 (28%), Positives = 65/125 (52%), Gaps = 13/125 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNR---ELQIMQMLDHPN 136
           +  E  +G G F VV++A C   G +VA+KKV    + D + +     E+ +++ LDHPN
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPN 63

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           ++     F      E   LN+VLE      ++R+ +++ +  + +P   +  Y  Q+C A
Sbjct: 64  VIKYLASFI-----ENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSA 118

Query: 196 LAYIH 200
           L ++H
Sbjct: 119 LEHMH 123

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 67.4 bits (165), Expect = 6e-13
 Identities = 34/122 (27%), Positives = 68/122 (55%), Gaps = 16/122 (13%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN-----RELQIMQMLDHPNIVALK 141
           + +G G+FG V+ A   +TGE++A+K++ +QD   K       E++++++L HPN+V   
Sbjct: 6   NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK-- 63

Query: 142 HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             +     +E++Y+   +EY    T+  +   + RI   +    +++YT Q+   LAY+H
Sbjct: 64  -YYGVEVHREKVYI--FMEYCSGGTLEELLE-HGRI---LDEHVIRVYTLQLLEGLAYLH 116

Query: 201 NC 202
           + 
Sbjct: 117 SH 118

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 67.1 bits (164), Expect = 8e-13
 Identities = 65/260 (25%), Positives = 99/260 (38%), Gaps = 79/260 (30%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL---QDKRYK------NRELQIMQMLDHPNIVAL 140
           +G+GSFG V++    + G+  A+K+V      +  +       +E+ ++  L HPNIV  
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ- 66

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
               +  T++EE  L + LE VP     +A+   + +   P   ++LYT QI   L Y+H
Sbjct: 67  ----YLGTEREEDNLYIFLELVPG--GSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLH 119

Query: 201 ------------NCIVD-----------------QLVEIIKVLGTP---TREEIKCMNPN 228
                       N +VD                 +        G+P     E I      
Sbjct: 120 DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGG- 178

Query: 229 Y-----------TEFKFPQIKPHPWHKVFQ----------KRLPP-------EAVDLVCR 260
           Y           T  +    KP PW ++            K LPP       EA D + +
Sbjct: 179 YGLAADIWSLGCTVLEMATGKP-PWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILK 237

Query: 261 FFQYSPNLRCTALEACVHPF 280
             Q  P+LR TA E   HPF
Sbjct: 238 CLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 67.5 bits (163), Expect = 1e-12
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 16/130 (12%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHP 135
           SY     +G GSFG V+ A+ R+   +VA+K + +    K+       RE+QI+  L+HP
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRK---LVALKVLAKKLESKSKEVERFLREIQILASLNHP 57

Query: 136 -NIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
            NIV L   F     ++E  L LV+EYV                 +          QI  
Sbjct: 58  PNIVKLYDFF-----QDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILS 112

Query: 195 ALAYIHNCIV 204
           AL Y+H+  +
Sbjct: 113 ALEYLHSKGI 122

Length = 384

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 19/128 (14%)

Query: 80  QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLD 133
           +K++ I E     G++GVV++A+ ++TGEIVA+KK+  +K  +       RE+ I+  L 
Sbjct: 8   EKLNRIEE-----GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ 62

Query: 134 HPNIVALKHCFF-STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQI 192
           HPNIV +K     S  DK  +Y  +V+EYV   +  +      + Q      VK    Q+
Sbjct: 63  HPNIVTVKEVVVGSNLDK--IY--MVMEYVEHDLKSL---METMKQPFLQSEVKCLMLQL 115

Query: 193 CRALAYIH 200
              +A++H
Sbjct: 116 LSGVAHLH 123

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 16/120 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQ---DKRYKN---RELQIMQMLDHPNIVALKH 142
           +VG GS+G+V + K +ETG+IVAIKK L+   DK  K    RE+++++ L H N+V L  
Sbjct: 8   LVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIE 67

Query: 143 CFFSTTDKEELYLNLVLEYVPETV-NRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F     K+ LY  LV E+V  TV + + +  + + +      V+ Y +QI R + + H+
Sbjct: 68  VF---RRKKRLY--LVFEFVDHTVLDDLEKYPNGLDESR----VRKYLFQILRGIEFCHS 118

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 66.0 bits (162), Expect = 3e-12
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 204 VDQLVEIIKVLGTPTREE----IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL +I  VLGTPT+++     K  +     F+FPQ  P   H++      PEA+DL+ 
Sbjct: 205 IDQLYKICSVLGTPTKQDWPEGYKLASK--LGFRFPQFAPTSLHQLIP-NASPEAIDLIK 261

Query: 260 RFFQYSPNLRCTALEACVHPFF 281
              ++ P  R TA +A  HP+F
Sbjct: 262 DMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 65.9 bits (161), Expect = 4e-12
 Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 16/122 (13%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKH- 142
           +G G+FG VF+A+ ++T +IVA+KKVL +   +       RE++I+Q+L H N+V L   
Sbjct: 20  IGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 79

Query: 143 CFFSTT----DKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           C    T     K   Y  LV E+     + +A   S  + +  L  +K     +   L Y
Sbjct: 80  CRTKATPYNRYKGSFY--LVFEFCE---HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY 134

Query: 199 IH 200
           IH
Sbjct: 135 IH 136

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 6/81 (7%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I + LGTP  +    +  + P+Y    FP+       KV    L  + +DL+ +
Sbjct: 206 IDQLFRIFRTLGTPDEDVWPGVTSL-PDYKP-TFPKWARQDLSKVVP-NLDEDGLDLLSK 262

Query: 261 FFQYSPNLRCTALEACVHPFF 281
              Y P  R +A  A  HP+F
Sbjct: 263 MLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 65.0 bits (159), Expect = 5e-12
 Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 78/259 (30%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCFFS 146
            +G GS+G V++A  +ETG++VAIK V  ++  +   +E+ I++  D P IV     +F 
Sbjct: 10  KLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFK 69

Query: 147 TTDKEELYLNLVLEY-VPETVNRI--ARNYSRIHQRMPLIYVKLYTYQICRALAYIH--- 200
            TD     L +V+EY    +V+ I    N +   + +  I      YQ  + L Y+H   
Sbjct: 70  NTD-----LWIVMEYCGAGSVSDIMKITNKTLTEEEIAAI-----LYQTLKGLEYLHSNK 119

Query: 201 ---------NCIVD--------------QLVEIIK----VLGTP---TREEIKCMNPNY- 229
                    N +++              QL + +     V+GTP     E I      Y 
Sbjct: 120 KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVI--QEIGYN 177

Query: 230 ---------------TEFKFPQIKPHPWHKVF------------QKRLPPEAVDLVCRFF 262
                           E K P    HP   +F             ++  PE  D V +  
Sbjct: 178 NKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCL 237

Query: 263 QYSPNLRCTALEACVHPFF 281
              P  R +A++   HPF 
Sbjct: 238 VKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 65.7 bits (161), Expect = 5e-12
 Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 23/122 (18%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL------QDKRYKNRELQIM---QMLDHPNIVAL 140
           +G G++G+V++A  R T E+VA+KK+        D +   RE  IM   ++ DHPNIV L
Sbjct: 15  LGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFRE--IMFLQELGDHPNIVKL 72

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARN--YSRIHQRMPLIYVKLYTYQICRALAY 198
            +   +  DK ++Y  LV EY+   ++ + R      +H+R    Y+    YQ+ +AL Y
Sbjct: 73  LNVIKAENDK-DIY--LVFEYMETDLHAVIRANILEDVHKR----YI---MYQLLKALKY 122

Query: 199 IH 200
           IH
Sbjct: 123 IH 124

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPN--YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           +DQL +I + LGTP  E            +F FP+    P  K+F     P+A+DL+ + 
Sbjct: 205 IDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPN-ASPQALDLLSQM 263

Query: 262 FQYSPNLRCTALEACVHPFF 281
             Y P+ R TA +A  HP+F
Sbjct: 264 LHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 64.6 bits (158), Expect = 6e-12
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQML-DHPNIVALKH 142
           G G+F  V +A+ R+TG+  AIK +   K +K+       RE+Q ++ L  HPNI+ L  
Sbjct: 8   GEGTFSEVLKAQSRKTGKYYAIKCM--KKHFKSLEQVNNLREIQALRRLSPHPNILRLIE 65

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
             F   D++   L LV E +   +  + +      + +P   VK Y YQ+ ++L ++H  
Sbjct: 66  VLF---DRKTGRLALVFELMDMNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRN 119

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 64.5 bits (158), Expect = 9e-12
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           +DQL +I + LGTPT E    +   P+Y EFK     P P  ++F      +A+DL+ R 
Sbjct: 209 IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKP--FPPTPLKQIF-PAASDDALDLLQRL 265

Query: 262 FQYSPNLRCTALEACVHPFF 281
              +PN R TA +A  HP+F
Sbjct: 266 LTLNPNKRITARQALEHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 64.5 bits (158), Expect = 1e-11
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           ++QL +II+V+G P+ E+I+ +   +        P     P  ++   +   +A+DL+ +
Sbjct: 219 LNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELL-PKASDDALDLLKK 277

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDP 287
              ++PN R TA EA  HP+  +  +P
Sbjct: 278 LLVFNPNKRLTAEEALEHPYVAQFHNP 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 15/120 (12%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYK-NRELQIMQMLDHPNIVALKH 142
            V+G GS GVV++ + + TG+I A+KK+     ++ R +  REL+ ++  + P +V    
Sbjct: 7   KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F+      E  +++VLEY+   ++  +     +   ++P   +     QI + L Y+H 
Sbjct: 67  AFYK-----EGEISIVLEYMDGGSLADLL----KKVGKIPEPVLAYIARQILKGLDYLHT 117

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 17/119 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGEIVA+KK+  +   +       RE+ +++ L+HPNIV L   
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDV 66

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNY--SRIHQRMPLIYVKLYTYQICRALAYIH 200
             S     +LY  LV E+    ++   + Y  S     +    +K Y YQ+ + +AY H
Sbjct: 67  VHSEN---KLY--LVFEF----LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH 116

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 200 HNCIVDQLVEIIKVLGTPTREEIK--CMNPNYTEFKFPQIKPHPWHKVFQK-RLPPEAVD 256
              + DQL +I +VLGTPT E       NP +  + FP   P P      +    P   +
Sbjct: 207 STDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEE 266

Query: 257 LVCRFFQYSPNLRCTALEACVHPFF 281
           L  +F QY P  R +A EA  HP+F
Sbjct: 267 LALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 16/126 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y  + V+G GS+GVV  A    TGE VAIKK+      + D     RE++++++L HP+I
Sbjct: 2   YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI 61

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIAR---NYSRIHQRMPLIYVKLYTYQICR 194
           V +KH     + +E   + +V E +   ++++ +   + +  H        + + YQ+ R
Sbjct: 62  VEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHH-------QFFLYQLLR 114

Query: 195 ALAYIH 200
           AL YIH
Sbjct: 115 ALKYIH 120

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 20/121 (16%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN----------RELQIMQMLDHPNIVA 139
           +G G++GVV++ + ++TG+IVA+KK+    R ++          RE+ +++ L HPNIV 
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMKKI----RLESEEEGVPSTAIREISLLKELQHPNIVC 63

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           L+         +E  L L+ E++   + +   +     Q M    VK Y YQI + + + 
Sbjct: 64  LQDVLM-----QESRLYLIFEFLSMDLKKYL-DSLPKGQYMDAELVKSYLYQILQGILFC 117

Query: 200 H 200
           H
Sbjct: 118 H 118

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 62.7 bits (153), Expect = 4e-11
 Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 18/122 (14%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKHC 143
           G G+FG V++A+  +TG +VA+KK+L     K+       RE++I++ L HPN+V L   
Sbjct: 17  GEGTFGEVYKARQIKTGRVVALKKILM-HNEKDGFPITALREIKILKKLKHPNVVPLIDM 75

Query: 144 FFSTTDKE-----ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
                DK       +Y  +V  Y+   ++ +  N   +      I  K Y  Q+   + Y
Sbjct: 76  AVERPDKSKRKRGSVY--MVTPYMDHDLSGLLEN-PSVKLTESQI--KCYMLQLLEGINY 130

Query: 199 IH 200
           +H
Sbjct: 131 LH 132

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 61.8 bits (150), Expect = 5e-11
 Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 23/132 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL-------QDKRYKN------RELQIMQ 130
           +I   ++G+GSFG V+      +GE++A+K+V           R ++      RE+ +++
Sbjct: 2   WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLK 61

Query: 131 MLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYT 189
            L H NIV               +LN+ LEYVP  +V  +  NY    + +    V+ + 
Sbjct: 62  ELQHENIVQYLGSSLDAD-----HLNIFLEYVPGGSVAALLNNYGAFEETL----VRNFV 112

Query: 190 YQICRALAYIHN 201
            QI + L Y+HN
Sbjct: 113 RQILKGLNYLHN 124

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 62.1 bits (151), Expect = 8e-11
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 18/128 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-VLQDKR---YKNRELQIMQMLDHPNIVALKHCFF 145
           +G GS G+VF A   +  + VA+KK VL D +   +  RE++I++ LDH NIV +     
Sbjct: 13  LGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLG 72

Query: 146 S-----TTDKEELY----LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
                 T D   L     + +V EY+   +  +          +   + +L+ YQ+ R L
Sbjct: 73  PSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE-----QGPLSEEHARLFMYQLLRGL 127

Query: 197 AYIHNCIV 204
            YIH+  V
Sbjct: 128 KYIHSANV 135

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 61.1 bits (149), Expect = 9e-11
 Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 17/118 (14%)

Query: 93  GSFGVVFQAKCRETGEIVAIKKV-LQDKRYKNR------ELQIMQMLDHPNIVALKHCFF 145
           G++G VF AK + TG+I AIK +   D   KN+      E  I+     P +V L   ++
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL---YY 60

Query: 146 STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
           S   K+ LY  LV+EY+P   +  +  N   + + +     ++Y  +I  AL Y+H+ 
Sbjct: 61  SFQGKKNLY--LVMEYLPGGDLASLLENVGSLDEDV----ARIYIAEIVLALEYLHSN 112

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 61.2 bits (149), Expect = 1e-10
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 6/88 (6%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           V QL  I+ VLG+P+ E +  +       Y +   P+ +P PW K+F K   PEA+DL+ 
Sbjct: 218 VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ-NLPRKQPVPWSKIFPKA-SPEALDLLS 275

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDP 287
           +  Q+ P  R T  +A  HPF  +  DP
Sbjct: 276 QMLQFDPEERITVEQALQHPFLAQYHDP 303

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 60.7 bits (148), Expect = 1e-10
 Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 10/120 (8%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKH 142
            +G GSFG V + + +  G+I+  K++       ++K+    E+ I++ L HPNIV    
Sbjct: 7   TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYD 66

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
                 D+    L +V+EY     + ++ +   +  + +   ++     Q+  AL   HN
Sbjct: 67  RII---DRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHN 123

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 60.9 bits (148), Expect = 1e-10
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 14/117 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++G VF+AK RET EIVA+K+V  D   +       RE+ +++ L H NIV L   
Sbjct: 8   IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV 67

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             S  DK+   L LV EY  + + +    +   +  +    VK + +Q+ + LA+ H
Sbjct: 68  LHS--DKK---LTLVFEYCDQDLKKY---FDSCNGDIDPEIVKSFMFQLLKGLAFCH 116

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 20/144 (13%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDH-PNIVALKH 142
           +G G++G V++A+ + TG++VA+KK   +   +       RE+ ++QML     IV L  
Sbjct: 9   IGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLD 68

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNR-IARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
                    +  L LV EY+   + + +  N     + +P   +K + YQ+ + +A+ H 
Sbjct: 69  VEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK 128

Query: 201 -----------NCIVDQLVEIIKV 213
                      N +VD+   ++K+
Sbjct: 129 HGVMHRDLKPQNLLVDKQKGLLKI 152

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 198 YIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFK----FPQIKPHPWHKVFQKRLPPE 253
           +  +  + QL+ I K+LGTPT +      P  ++ +    FPQ KP    +     L PE
Sbjct: 212 FPGDSELQQLLHIFKLLGTPTEQVW----PGVSKLRDWHEFPQWKPQDLSRAVPD-LSPE 266

Query: 254 AVDLVCRFFQYSPNLRCTALEACVHPFFD 282
            +DL+ +  +Y P  R +A  A  HP+FD
Sbjct: 267 GLDLLQKMLRYDPAKRISAKAALTHPYFD 295

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 17/119 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVALKHCF 144
           +G G++  V++ + R TGEIVA+K++  D          RE+ +M+ L H NIV L H  
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRL-HDV 66

Query: 145 FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQR---MPLIYVKLYTYQICRALAYIH 200
             T +K    L LV EY+ + + +    Y   H     +    VK +TYQ+ + +A+ H
Sbjct: 67  IHTENK----LMLVFEYMDKDLKK----YMDTHGVRGALDPNTVKSFTYQLLKGIAFCH 117

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 59.0 bits (143), Expect = 6e-10
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)

Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKK-----VLQDKRYKNRELQIMQMLDHPNIV 138
           +G G FG V    CR       TGE VA+K        Q +    RE++I++ LDH NIV
Sbjct: 12  LGEGHFGKVE--LCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALA 197
             K             L L++EY+P    R    Y + H+ ++ L  + L++ QIC+ + 
Sbjct: 70  KYKGV---CEKPGGRSLRLIMEYLPSGSLRD---YLQRHRDQINLKRLLLFSSQICKGMD 123

Query: 198 YIHN 201
           Y+ +
Sbjct: 124 YLGS 127

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 26/128 (20%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
             +G G+ G V++A  R TG+ VAIKK+ L+ +  +    E+ IM+   HPNIV     +
Sbjct: 25  EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSY 84

Query: 145 FSTTDKEELYLNLVLEYVPE-------TVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
                 +EL++  V+EY+         T N +  N  +I       YV     ++ + L 
Sbjct: 85  L---VGDELWV--VMEYMDGGSLTDIITQNFVRMNEPQI------AYVCR---EVLQGLE 130

Query: 198 YIH--NCI 203
           Y+H  N I
Sbjct: 131 YLHSQNVI 138

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 57.5 bits (139), Expect = 2e-09
 Identities = 41/122 (33%), Positives = 61/122 (50%), Gaps = 21/122 (17%)

Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 12  LGKGNFGSV--ELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK 69

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNR--IARNYSRIHQRMPLIYVKLYTYQICRALA 197
            K   +S   +    L LV+EY+P    R  + ++  R+  R  L    LY  QIC+ + 
Sbjct: 70  YKGVCYSAGRRN---LRLVMEYLPYGSLRDYLQKHRERLDHRKLL----LYASQICKGME 122

Query: 198 YI 199
           Y+
Sbjct: 123 YL 124

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 57.7 bits (140), Expect = 2e-09
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 205 DQLVEIIKVLGTPTREEIKCM-NP---NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            QL  I+ VLGTP++E++ C+ +    NY +   P     PW+K+F     P+A+DL+ +
Sbjct: 217 HQLNLILGVLGTPSQEDLNCIISLRARNYIK-SLPFKPKVPWNKLFPN-ADPKALDLLDK 274

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKP 305
              ++P+ R T  EA  HP+ ++  DP+       P P  F    
Sbjct: 275 MLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPFPFDFELFD 319

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 15/120 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYK--NRELQIMQMLDHPNIVALKH 142
           +GTGSFG V  AK + TGE  AIK     ++L+ K+ +   +E  I+  L HP IV +  
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMC 85

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
            F    D+  +Y   +LE+V   V      + R   R P    K Y  ++  A  Y+H+ 
Sbjct: 86  SF---QDENRVY--FLLEFV---VGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK 137

Length = 329

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 57.1 bits (138), Expect = 3e-09
 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 19/121 (15%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ R T E +A+KK+  ++  +       RE+ +++ + H NIV L+  
Sbjct: 10  IGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDV 69

Query: 144 FFSTTDKEELYLNLVLEYVPETVNR---IARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             S     E  L LV EY+   + +    + ++++ + R+    +K Y YQI R +AY H
Sbjct: 70  VHS-----EKRLYLVFEYLDLDLKKHMDSSPDFAK-NPRL----IKTYLYQILRGIAYCH 119

Query: 201 N 201
           +
Sbjct: 120 S 120

Length = 294

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 13/123 (10%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKR----YKNRELQIMQMLDHPNI 137
           +Y     +G GS+  V++ + + TG++VA+K++ L+ +        RE  +++ L H NI
Sbjct: 6   TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANI 65

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L H    T       L LV EY+   + +   +       + +  V+L+ +Q+ R LA
Sbjct: 66  VTL-HDIIHTKKT----LTLVFEYLDTDLKQYMDDCGGG---LSMHNVRLFLFQLLRGLA 117

Query: 198 YIH 200
           Y H
Sbjct: 118 YCH 120

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 14/119 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKHC 143
           +G G++G+V  AK  ET E VAIKK+        D +   RE+++++ LDH N++A+K  
Sbjct: 13  IGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDI 72

Query: 144 FFSTTDK--EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                 +   ++Y  +V E +   +++I R+     Q +   + + + YQ+ R L YIH
Sbjct: 73  MPPPHREAFNDVY--IVYELMDTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIH 125

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 9/78 (11%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDK---RYKNRELQIMQMLDHPNIVALKHC 143
             +G+G++G V++A+   TGE+VAIK + L+         +E+ +++   HPNIVA    
Sbjct: 9   QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGS 68

Query: 144 FFSTTDKEELYLNLVLEY 161
           +          L +V+EY
Sbjct: 69  YLRRD-----KLWIVMEY 81

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 56.3 bits (136), Expect = 5e-09
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 205 DQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           DQL++I +++GTPT      ++  P Y +  FP+  P    ++F     P  +DL+ R  
Sbjct: 208 DQLLKIFRIMGTPTESTWPGISQLPEY-KPTFPRYPPQDLQQLF-PHADPLGIDLLHRLL 265

Query: 263 QYSPNLRCTALEACVHPFF 281
           Q +P LR +A +A  HP+F
Sbjct: 266 QLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 56.0 bits (135), Expect = 7e-09
 Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 15/118 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHC 143
           VG G+FG+V  A+ + TG+ VAIKK+++        +   REL++++ L H NI++L   
Sbjct: 18  VGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDI 77

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           F S    E++Y   V E +   ++R+  +     + +   +++ + YQI R L Y+H+
Sbjct: 78  FISP--LEDIY--FVTELLGTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHS 126

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 55.7 bits (135), Expect = 8e-09
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 20/129 (15%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN----------RELQIMQMLD---HPN 136
           +G G++G V++A+   TG  VA+KKV    R             RE+ +++ L+   HPN
Sbjct: 7   IGEGAYGTVYKARDLNTGRFVALKKV----RVPLSEEGIPLSTLREIALLKQLESFEHPN 62

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           IV L           EL L LV E+V + +        +    +P   +K    Q+ R +
Sbjct: 63  IVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPK--PGLPPETIKDLMRQLLRGV 120

Query: 197 AYIH-NCIV 204
            ++H + IV
Sbjct: 121 DFLHSHRIV 129

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 55.2 bits (134), Expect = 1e-08
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           ++QL +I ++ G+PT E    +  + P +   K  +       + F+  + P A+DL+ +
Sbjct: 208 LEQLEKIFELCGSPTDENWPGVSKL-PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDK 266

Query: 261 FFQYSPNLRCTALEACVHPFF 281
                P  R +A +A  H +F
Sbjct: 267 LLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ ++GTP  E ++ ++     NY +   PQ+    + +VF     P A+DL+ 
Sbjct: 222 IDQLKRIMNLVGTPDEELLQKISSESARNYIQ-SLPQMPKKDFKEVFS-GANPLAIDLLE 279

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPN 288
           +     P+ R TA EA  HP+  E  DP 
Sbjct: 280 KMLVLDPDKRITAAEALAHPYLAEYHDPE 308

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 16/129 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y     +G G++G+V  A  + TG  VAIKK+         +R   RE++I++   H NI
Sbjct: 7   YQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQR-TLREIKILRRFKHENI 65

Query: 138 VALKHCFFSTTDKE--ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           + +       + +   ++Y  +V E +   + ++ +      Q +   +++ + YQI R 
Sbjct: 66  IGILDIIRPPSFESFNDVY--IVQELMETDLYKLIKT-----QHLSNDHIQYFLYQILRG 118

Query: 196 LAYIHNCIV 204
           L YIH+  V
Sbjct: 119 LKYIHSANV 127

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 55.1 bits (133), Expect = 1e-08
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 10/78 (12%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVALKHC 143
           V+G G+  VV+ A C    E VAIK++  +K   +     +E+Q M   +HPN+V   + 
Sbjct: 8   VIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKY-YT 66

Query: 144 FFSTTDKEELYLNLVLEY 161
            F     +EL+  LV+ Y
Sbjct: 67  SF--VVGDELW--LVMPY 80

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 42/123 (34%), Positives = 56/123 (45%), Gaps = 22/123 (17%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--RYKNRELQIM-------QMLDHPNIVA 139
           V+G GSFG V  AK +  G+  A+ KVLQ K    K  +  IM       + + HP +V 
Sbjct: 2   VIGKGSFGKVLLAKHKADGKFYAV-KVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           L H  F T DK    L  VL+YV   E    + R      +  P    + Y  +I  AL 
Sbjct: 61  L-HYSFQTADK----LYFVLDYVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALG 110

Query: 198 YIH 200
           Y+H
Sbjct: 111 YLH 113

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 55.0 bits (132), Expect = 1e-08
 Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 13/123 (10%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN---RELQIMQMLDHPNIVA 139
           E  +G G F  V++A C   G  VA+KKV    L D + +    +E+ +++ L+HPN++ 
Sbjct: 7   EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 66

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
               F      E+  LN+VLE      ++R+ +++ +  + +P   V  Y  Q+C AL +
Sbjct: 67  YYASFI-----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121

Query: 199 IHN 201
           +H+
Sbjct: 122 MHS 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 1e-08
 Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 14/123 (11%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQML-DHPNIVALKH 142
           V+G G++G V++A+ ++TG++VAIK  + D           E  I++   +HPNI     
Sbjct: 13  VIGEGTYGKVYKARHKKTGQLVAIK--IMDIIEDEEEEIKEEYNILRKYSNHPNIATFYG 70

Query: 143 CFF---STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
            F       + ++L+  LV+E     +V  + +   +  +R+   ++     +  R LAY
Sbjct: 71  AFIKKNPPGNDDQLW--LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128

Query: 199 IHN 201
           +H 
Sbjct: 129 LHE 131

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 17/126 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQMLDHPN 136
           +    V+G G+FG V   + R+T ++ A+K     K ++    +N   E +I+Q L+HP 
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPF 61

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRA 195
           +V L   ++S  D+E +Y  LV++ +     R    Y    + +     VK +  +I  A
Sbjct: 62  LVNL---WYSFQDEENMY--LVVDLLLGGDLR----YHLSQKVKFSEEQVKFWICEIVLA 112

Query: 196 LAYIHN 201
           L Y+H+
Sbjct: 113 LEYLHS 118

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           V QL  I ++LG+P+ E++  + N     +    P      + ++F     P A+DL+ +
Sbjct: 215 VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLF-PHANPLAIDLLEK 273

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLI 320
              + P+ R T  EA  HP+   L DP+       P    F+F+   L+    E I  LI
Sbjct: 274 MLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQTPFS--FDFEEDALT---EEDIKELI 328

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 22/122 (18%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKH 142
           VVG G++GVV + + +ET EIVAIKK          K    REL++++ L   NIV LK 
Sbjct: 8   VVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKE 67

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL----IYVKLYTYQICRALAY 198
            F     + +LY  LV EYV        +N   + + MP       V+ Y YQ+ +A+ +
Sbjct: 68  AF---RRRGKLY--LVFEYV-------EKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHW 115

Query: 199 IH 200
            H
Sbjct: 116 CH 117

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 54.4 bits (131), Expect = 2e-08
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 19/123 (15%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVAL 140
             +G GSFG V+ A+   T E+VAIKK+    +  N       +E++ +Q L HPN +  
Sbjct: 21  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEY 80

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAY 198
           K C+       E    LV+EY   +    A +   +H++ PL  V++    +   + LAY
Sbjct: 81  KGCYL-----REHTAWLVMEYCLGS----ASDILEVHKK-PLQEVEIAAICHGALQGLAY 130

Query: 199 IHN 201
           +H+
Sbjct: 131 LHS 133

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 30/145 (20%)

Query: 77  NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------------- 123
           +  ++      H+ G G++G V +A    TG+IVAIKKV +     N             
Sbjct: 5   SISERYIQKGAHL-GEGTYGKVEKAYDTLTGKIVAIKKV-KIIEISNDVTKDRQLVGMCG 62

Query: 124 ------RELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIH 177
                 REL+IM  + H NI+ L   +      E  ++NLV++ +   + ++     +I 
Sbjct: 63  IHFTTLRELKIMNEIKHENIMGLVDVYV-----EGDFINLVMDIMASDLKKVVD--RKI- 114

Query: 178 QRMPLIYVKLYTYQICRALAYIHNC 202
            R+    VK    QI   L  +H  
Sbjct: 115 -RLTESQVKCILLQILNGLNVLHKW 138

Length = 335

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 32/124 (25%), Positives = 66/124 (53%), Gaps = 20/124 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV--------LQDKRYKN--RELQIMQMLDHPNIV 138
            +GTG+F   +QA+  +TG ++A+K+V         Q++  +   +E+++M  L+HP+I+
Sbjct: 7   QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHII 66

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
                  +T   E+ + NL +E++   +V+ +   Y    +    + +  YT Q+ R L+
Sbjct: 67  ---RMLGAT--CEDSHFNLFVEWMAGGSVSHLLSKYGAFKEA---VIIN-YTEQLLRGLS 117

Query: 198 YIHN 201
           Y+H 
Sbjct: 118 YLHE 121

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 16/121 (13%)

Query: 89  VVGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVA 139
           V+G G FG V    +      TGE+VA+K + ++   +N      E+ I++ L H NIV 
Sbjct: 11  VLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVK 70

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
            K C    +++    L L++EYVP       R+Y   H ++ L  + L+  QIC  +AY+
Sbjct: 71  YKGC---CSEQGGKGLQLIMEYVPLGS---LRDYLPKH-KLNLAQLLLFAQQICEGMAYL 123

Query: 200 H 200
           H
Sbjct: 124 H 124

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 53.4 bits (129), Expect = 4e-08
 Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNP-NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           +DQ+ +I  VLGTP  E +K      +  + FP  K     K+       E +DL+ +  
Sbjct: 205 LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPN-ASAEGLDLLKKLL 263

Query: 263 QYSPNLRCTALEACVHPFF 281
            Y P+ R TA +A  HP+F
Sbjct: 264 AYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 20/96 (20%)

Query: 204 VDQLVEIIKVLGTPTRE------EIKCMN-----PNYTEFKFPQIKPHPWHKVFQKRLPP 252
           VDQL +I++VLGTP  E        K  N     PN  +  F  I P+           P
Sbjct: 216 VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNA---------NP 266

Query: 253 EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 288
            A+DL+ +   + P  R +  EA  HP+     DP+
Sbjct: 267 LALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPD 302

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 53.8 bits (129), Expect = 4e-08
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCR 260
           +DQL +I+KV G P  E ++ +     +  + +  P    K F    P   P+AVDL+ +
Sbjct: 221 LDQLTQILKVTGVPGPEFVQKLEDKAAK-SYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
             +   + R TA EA  HP+FD  RD +
Sbjct: 280 MLELDVDKRLTATEALEHPYFDSFRDAD 307

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 53.5 bits (128), Expect = 4e-08
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 19/127 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
           ++  H +G GSFG V+ A    T E+VA+KK+    +  N       +E++ +Q L HPN
Sbjct: 23  FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPN 82

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICR 194
            +  K C+      +E    LV+EY   +    A +   +H++ PL  V++   T+   +
Sbjct: 83  TIEYKGCYL-----KEHTAWLVMEYCLGS----ASDLLEVHKK-PLQEVEIAAITHGALQ 132

Query: 195 ALAYIHN 201
            LAY+H+
Sbjct: 133 GLAYLHS 139

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 53.0 bits (127), Expect = 6e-08
 Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLP---PEAVD 256
           +DQL+EI+KV GTP++E ++ +      NY + K P+ +     K F+  LP   P AV+
Sbjct: 222 LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVK-KLPRFR----KKDFRSLLPNANPLAVN 276

Query: 257 LVCRFFQYSPNLRCTALEACVHPFFDELRDPN 288
           ++ +        R TA EA  HP+F+E  DP 
Sbjct: 277 VLEKMLVLDAESRITAAEALAHPYFEEFHDPE 308

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 52.7 bits (126), Expect = 8e-08
 Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 13/123 (10%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
           +YI    +G G++  VF+ + + T  +VA+K++  +          RE+ +++ L H NI
Sbjct: 7   TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 66

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L       TDK    L LV EY+ + + +   +   I   M +  VK++ YQI R LA
Sbjct: 67  VTLHDIVH--TDKS---LTLVFEYLDKDLKQYMDDCGNI---MSMHNVKIFLYQILRGLA 118

Query: 198 YIH 200
           Y H
Sbjct: 119 YCH 121

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 52.5 bits (126), Expect = 8e-08
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 34/134 (25%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKH 142
            +G G++G V++A+ ++TGE+VA+KKV  D   +       RE++I++ L+H NIV LK 
Sbjct: 14  QIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKE 73

Query: 143 CFFSTTD-----KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTY------- 190
                 D     K++    LV EY+              H  M L+   L  +       
Sbjct: 74  IVTDKQDALDFKKDKGAFYLVFEYMD-------------HDLMGLLESGLVHFSEDHIKS 120

Query: 191 ---QICRALAYIHN 201
              Q+   L Y H 
Sbjct: 121 FMKQLLEGLNYCHK 134

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 205 DQLVEIIKVLGTPTREE---IKCMNPNYTEFKFPQIKPHPW----HKVFQKRLP--PEAV 255
           DQL  I +VLGTPT ++   IK M P Y                  K  +K      +  
Sbjct: 232 DQLERIFEVLGTPTEKDWPDIKKM-PEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGF 290

Query: 256 DLVCRFFQYSPNLRCTALEACVHPFF 281
           DL+ +  +Y P  R TA EA  HP+F
Sbjct: 291 DLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 21/125 (16%)

Query: 90  VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVAL 140
           +G G++G V++AK +    G+  AIKK   DK           RE+ +++ L H N+V+L
Sbjct: 8   IGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL 67

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSR-----IHQRMPLIYVKLYTYQICRA 195
              F    DK    + L+ +Y    + +I + + +     I   M    VK   +QI   
Sbjct: 68  VEVFLEHADKS---VYLLFDYAEHDLWQIIKFHRQAKRVSIPPSM----VKSLLWQILNG 120

Query: 196 LAYIH 200
           + Y+H
Sbjct: 121 VHYLH 125

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 20/141 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQD--------KRYK--NRELQIMQMLDHPNIV 138
           V+G G++G V+       G+++A+K+V  D        K Y+    E+ +++ L H NIV
Sbjct: 7   VLGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIV 65

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
                 +  T  ++  +++ +E+VP     I+   +R       ++ K YT QI   +AY
Sbjct: 66  Q-----YLGTCLDDNTISIFMEFVPG--GSISSILNRFGPLPEPVFCK-YTKQILDGVAY 117

Query: 199 IH-NCIVDQLVEIIKVLGTPT 218
           +H NC+V + ++   V+  P 
Sbjct: 118 LHNNCVVHRDIKGNNVMLMPN 138

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 50.8 bits (121), Expect = 3e-07
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)

Query: 205 DQLVEIIKVLGTPTREEIKCM--NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           +QL  I ++LGTPT E    +  N  +  + +P+ +    H     RL  +  +L+ +  
Sbjct: 212 EQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHN-HAPRLDSDGAELLSKLL 270

Query: 263 QYSPNLRCTALEACVHPFFDELRDPNTRLPN 293
           Q+    R +A EA  HP+F  L +   +LP+
Sbjct: 271 QFEGRKRISAEEAMKHPYFHCLGERIHKLPD 301

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 50.7 bits (121), Expect = 4e-07
 Identities = 33/119 (27%), Positives = 60/119 (50%), Gaps = 14/119 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A  R TG  VAIKK+       L  KR   REL++++ + H N++ L  
Sbjct: 23  VGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKR-AYRELRLLKHMKHENVIGLLD 81

Query: 143 CFFSTTDKEELY-LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            F      +  +   LV+ ++   + ++ +     H+++    ++   YQ+ + L YIH
Sbjct: 82  VFTPDLSLDRFHDFYLVMPFMGTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIH 135

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 50.4 bits (120), Expect = 4e-07
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 15/119 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
           +G GSFG V+ A+     E+VAIKK+    +  N       +E++ +Q L HPN +  + 
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           C+       E    LV+EY   + + +   + +  Q + +  V   T+   + LAY+H+
Sbjct: 83  CYL-----REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQGLAYLHS 133

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 205 DQLVEIIKVLGTPTREEIKCMNPN--YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           D+L  I ++LGTPT E    ++ N  +  + FP+ KP P       RL  E ++L+ +F 
Sbjct: 212 DELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLIN-HAPRLDTEGIELLTKFL 270

Query: 263 QYSPNLRCTALEACVHPFFDEL 284
           QY    R +A EA  H +F  L
Sbjct: 271 QYESKKRISAEEAMKHAYFRSL 292

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 49.5 bits (119), Expect = 7e-07
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 11/85 (12%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQ--KRLPP-----EAVD 256
           +DQL +I K+LGTPT +      P ++E    + K    +   Q  K+ P         D
Sbjct: 213 IDQLNKIFKLLGTPTEKIW----PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFD 268

Query: 257 LVCRFFQYSPNLRCTALEACVHPFF 281
           L+ R   Y P  R +A +A  HP+F
Sbjct: 269 LLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 49.6 bits (118), Expect = 8e-07
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 13/123 (10%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
           +Y+    +G G++  VF+ + + T  +VA+K++  +          RE+ +++ L H NI
Sbjct: 6   TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI 65

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L H    T    E  L LV EY+   + +   N   +   M +  VK++ +Q+ R L+
Sbjct: 66  VTL-HDIIHT----ERCLTLVFEYLDSDLKQYLDNCGNL---MSMHNVKIFMFQLLRGLS 117

Query: 198 YIH 200
           Y H
Sbjct: 118 YCH 120

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 49.4 bits (118), Expect = 9e-07
 Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           +D+L +I ++LGTP  E    +   P+Y    FP+  P     V    L P  VDL+ + 
Sbjct: 210 IDELFKIFRILGTPNEETWPGVTSLPDYKS-AFPKWPPKDLATVVPT-LEPAGVDLLSKM 267

Query: 262 FQYSPNLRCTALEACVHPFFDELRD 286
            +  P+ R TA  A  H +F +L D
Sbjct: 268 LRLDPSKRITARAALEHEYFKDLGD 292

Length = 294

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 49.5 bits (118), Expect = 9e-07
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 13/124 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN---RELQIMQMLDHPNI 137
           Y +   VG+G++G V  A  + TGE VAIKK+    Q + +     REL +++ + H N+
Sbjct: 17  YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV 76

Query: 138 VALKHCFFSTTDKEELY-LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           + L   F S    +E     LV+ Y+   + +I      +   +    V+   YQ+   L
Sbjct: 77  IGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKI------MGHPLSEDKVQYLVYQMLCGL 130

Query: 197 AYIH 200
            YIH
Sbjct: 131 KYIH 134

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 12/118 (10%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVL--QDKRYKN---RELQIMQMLDHPNIVALKHC 143
            +G G+ GVV +   R TG+I+A+K +    ++  +    REL I+   + P IV     
Sbjct: 8   ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGA 67

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           F++  D     +++ +EY+      + +    +  R+P   +      + + L Y+H 
Sbjct: 68  FYNNGD-----ISICMEYMDGG--SLDKILKEVQGRIPERILGKIAVAVLKGLTYLHE 118

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 49.7 bits (119), Expect = 9e-07
 Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 12/81 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAI----KKVLQDKRYKNRELQ---IMQMLDHPNIVALKH 142
           VG G +G VF AK ++TGEIVA+    K +L         L    I+       +V L +
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLY 68

Query: 143 CFFSTTDKEELYLNLVLEYVP 163
            F    D E LY  L +EYVP
Sbjct: 69  AF---QDDEYLY--LAMEYVP 84

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 9e-07
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 14/123 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPNIV 138
           +     +G GSFG V++A  + T ++VAIK +       +     +E+Q +     P I 
Sbjct: 3   FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYIT 62

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
                F   +      L +++EY          +  +   ++   Y+     ++   L Y
Sbjct: 63  KYYGSFLKGSK-----LWIIMEYCG---GGSCLDLLKP-GKLDETYIAFILREVLLGLEY 113

Query: 199 IHN 201
           +H 
Sbjct: 114 LHE 116

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 49.0 bits (117), Expect = 9e-07
 Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 16/125 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKNR-----ELQIMQMLDHPNI 137
           YI   V+G G+FG     +  E   +V  K+V L     K R     E+ I+ +L HPNI
Sbjct: 2   YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI 61

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           +A  + F      ++  L + +EY       ++I R   +  Q      V  Y +QI  A
Sbjct: 62  IAYYNHFM-----DDNTLLIEMEYANGGTLYDKIVR---QKGQLFEEEMVLWYLFQIVSA 113

Query: 196 LAYIH 200
           ++YIH
Sbjct: 114 VSYIH 118

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 26/132 (19%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-------------LQIMQMLDHPN 136
           +G G++G V++A+   +G  VA+K V    R +  E             L+ ++  DHPN
Sbjct: 8   IGVGAYGTVYKARDPHSGHFVALKSV----RVQTNEDGLPLSTVREVALLKRLEAFDHPN 63

Query: 137 IVALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNY-SRIHQR-MPLIYVKLYTYQIC 193
           IV L   C  S TD+ E  + LV E+V + +    R Y  ++    +P   +K    Q  
Sbjct: 64  IVRLMDVCATSRTDR-ETKVTLVFEHVDQDL----RTYLDKVPPPGLPAETIKDLMRQFL 118

Query: 194 RALAYIH-NCIV 204
           R L ++H NCIV
Sbjct: 119 RGLDFLHANCIV 130

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)

Query: 203 IVDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRL--PPEAVDLV 258
           + +QL +I  VLG PT +    ++  PNY    F   KP     V+ KRL  PP+A DL 
Sbjct: 210 VFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVW-KRLSRPPKAEDLA 268

Query: 259 CRFFQYSPNLRCTALEACVHPFF 281
            +     P  R +A +A +HP+F
Sbjct: 269 SQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 48.7 bits (116), Expect = 2e-06
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 4/87 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           V+Q   I  +LGTP  + I  + + N   F    P+ +P P+ + F+    P A+DL+ +
Sbjct: 212 VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKN-ADPSAIDLLEK 270

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDP 287
              + P  R +A EA  HP+     DP
Sbjct: 271 MLVFDPQKRISAAEALAHPYLAPYHDP 297

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 19/122 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
           V+G G+FG V+  + ++TG++ A+K + +    K  ++        I+   D P IV L 
Sbjct: 8   VIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKL- 66

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
             ++S  D+E LY  LV+EY+P  + +N + R         P    + Y  ++  AL  +
Sbjct: 67  --YYSFQDEEHLY--LVMEYMPGGDLMNLLIR-----KDVFPEETARFYIAELVLALDSV 117

Query: 200 HN 201
           H 
Sbjct: 118 HK 119

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 19/121 (15%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
           +G GSFG V+ A+   T E+VAIKK+    +  N       +E++ +Q + HPN +  K 
Sbjct: 33  IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL--IYVKLYTYQICRALAYIH 200
           C+       E    LV+EY   +    A +   +H++ PL  + +   T+   + LAY+H
Sbjct: 93  CYL-----REHTAWLVMEYCLGS----ASDLLEVHKK-PLQEVEIAAITHGALQGLAYLH 142

Query: 201 N 201
           +
Sbjct: 143 S 143

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 12/119 (10%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKHC 143
           VG+G++G V  A      + VA+KK+      L   R   REL++++ + H N++ L   
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDV 82

Query: 144 FFSTTDKEELY-LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           F   T  E    + LV   +   +N I +      Q++   +V+   YQ+ R L YIH+
Sbjct: 83  FTPATSIENFNEVYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHS 136

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 31/127 (24%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN---RELQIMQMLDHP 135
           ++  E  +G G F  V++A C    + VA+KKV    + D + +    +E+ +++ L+HP
Sbjct: 3   NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           N++     F    +     LN+VLE      ++++ + + +  + +P   V  Y  Q+C 
Sbjct: 63  NVIKYLDSFIEDNE-----LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCS 117

Query: 195 ALAYIHN 201
           A+ ++H+
Sbjct: 118 AVEHMHS 124

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 22/124 (17%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ---------IMQMLDHPNIVA 139
           V+G GSFG V  AK +  G+  A+ KVLQ K   NR+ Q         +++ + HP +V 
Sbjct: 2   VIGKGSFGKVLLAKRKLDGKCYAV-KVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           L H  F TT+K    L  VL++V   E    + R  S      P    + Y  +I  AL 
Sbjct: 61  L-HYSFQTTEK----LYFVLDFVNGGELFFHLQRERS-----FPEPRARFYAAEIASALG 110

Query: 198 YIHN 201
           Y+H+
Sbjct: 111 YLHS 114

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 47.8 bits (114), Expect = 3e-06
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 19/120 (15%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
           VGTG+FG V   + R +    A+K +       L+ +++ + E ++++ + HP I+ L  
Sbjct: 9   VGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRL-- 66

Query: 143 CFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            F++  D+  LY  +++EYVP  E  + + RN  R      L     Y  +I  AL Y+H
Sbjct: 67  -FWTEHDQRFLY--MLMEYVPGGELFSYL-RNSGRFSNSTGL----FYASEIVCALEYLH 118

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH---KVFQKRLPPEAVDLVCR 260
           +DQL  I++V+GTP+ E +K ++  +       +   P     K+F +   P A+DL+ +
Sbjct: 222 IDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIF-RGANPLAIDLLEK 280

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 296
                 + R +A EA  HP+F +  DP    P   P
Sbjct: 281 MLVLDSDKRISASEALAHPYFSQYHDPEDE-PEAEP 315

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 47.7 bits (113), Expect = 4e-06
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 14/120 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 25  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 83

Query: 143 CFFSTTDKEELY-LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F      EE   + LV   +   +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 84  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 138

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 47.0 bits (112), Expect = 5e-06
 Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 14/84 (16%)

Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHP-------WHKVFQKRLPPEAVDL 257
           DQL  I ++LGTPT E      P  +  K P  KP+P          V   +L     DL
Sbjct: 208 DQLKRIFRLLGTPTEESW----PGVS--KLPDYKPYPMYPATTSLVNVV-PKLNSTGRDL 260

Query: 258 VCRFFQYSPNLRCTALEACVHPFF 281
           +      +P  R +A EA  HP+F
Sbjct: 261 LQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 47.0 bits (111), Expect = 6e-06
 Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 15/124 (12%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKR----YKNRELQIMQMLDHPNI 137
           SY     +G GS+  V++ K +  G++VA+K + LQ++        RE  +++ L H NI
Sbjct: 6   SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI 65

Query: 138 VALKHCFFSTTDKEELYLNLVLEYV-PETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           V L H    T +     L LV EYV  +    + ++   +H       VKL+ +Q+ R L
Sbjct: 66  VLL-HDIIHTKET----LTLVFEYVHTDLCQYMDKHPGGLHPE----NVKLFLFQLLRGL 116

Query: 197 AYIH 200
           +YIH
Sbjct: 117 SYIH 120

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 46.0 bits (109), Expect = 9e-06
 Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 14/124 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQ--DKRYKN---RELQIMQMLDHPNI 137
           +   + +G GSFGVVF+   +    + A+K++ L   ++R +     E +++  LD   I
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           +     F      ++  LN+V+EY     ++++ +      + +P   V  +  QI   L
Sbjct: 62  IRYYESFL-----DKGKLNIVMEYAENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGL 114

Query: 197 AYIH 200
           A++H
Sbjct: 115 AHLH 118

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           +DQL  I ++LGTPT +    +   P+Y    FP+ K     +   K L  + +DL+ + 
Sbjct: 208 IDQLFRIFRILGTPTEDVWPGVTSLPDYKN-TFPKWKK-GSLRSAVKNLDEDGLDLLEKM 265

Query: 262 FQYSPNLRCTALEACVHPFF 281
             Y P  R +A +A  HP+F
Sbjct: 266 LIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 46.2 bits (109), Expect = 1e-05
 Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 13/123 (10%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
           +YI    +G G++  V++ + + T  +VA+K++  +          RE+ +++ L H NI
Sbjct: 7   TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 66

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L H    T    E  L LV EY+ + + +   +       + +  VKL+ +Q+ R L 
Sbjct: 67  VTL-HDIIHT----EKSLTLVFEYLDKDLKQYLDDCGNS---INMHNVKLFLFQLLRGLN 118

Query: 198 YIH 200
           Y H
Sbjct: 119 YCH 121

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCR 260
            DQL +I  V+G P+ EE    N +     FP   P      F+  +P    E +DL+ +
Sbjct: 212 ADQLDKIFDVIGLPSEEEWP-RNVSLPRSSFPSYTPRS----FKSFVPEICEEGLDLLKK 266

Query: 261 FFQYSPNLRCTALEACVHPFF 281
              ++P+ R +A EA  HP+F
Sbjct: 267 MLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I++++GTP  E +K ++     NY +    Q+    +  VF     P AVDL+ 
Sbjct: 224 IDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIGA-NPLAVDLLE 281

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPN 288
           +      + R TA +A  H +F +  DP+
Sbjct: 282 KMLVLDSDKRITAAQALAHAYFAQYHDPD 310

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 19/122 (15%)

Query: 90  VGTGSFGVVFQAKCRETG--EI-VAIK-----KVLQDKRYKNRELQIMQMLDHPNIVALK 141
           +G G+FG V +         E+ VA+K      +   K+   RE  +M  LDHP IV L 
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRL- 61

Query: 142 HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                    E L   LV+E  P   + +    Y +  + +P+  +K   +Q+   +AY+ 
Sbjct: 62  ---IGVCKGEPLM--LVMELAPLGPLLK----YLKKRREIPVSDLKELAHQVAMGMAYLE 112

Query: 201 NC 202
           + 
Sbjct: 113 SK 114

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 15/121 (12%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK---KVLQDKRYKNR----ELQIMQMLDHPNIVALK 141
           ++G G  G VF  + + TG++ A+K   K    KR K +    E +I+  LDHP +  L 
Sbjct: 8   LLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLY 67

Query: 142 HCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             F + T     YL LV++Y P   + R+ +   +  + +     + Y  ++  AL Y+H
Sbjct: 68  ASFQTET-----YLCLVMDYCPGGELFRLLQ--RQPGKCLSEEVARFYAAEVLLALEYLH 120

Query: 201 N 201
            
Sbjct: 121 L 121

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 204 VDQLVEIIKVLGT--PTREEIKCMNPNYTEFKFPQIK-PHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  IIK LG   P  +EI   NP +   + P++K   P  K F K L    +DL  +
Sbjct: 207 IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPK-LSGLVLDLAKQ 265

Query: 261 FFQYSPNLRCTALEACVHPFF 281
             +  P+ R ++ +   H FF
Sbjct: 266 CLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 18/122 (14%)

Query: 90  VGTGSFGVVFQAKCRET--GEIVAIKKV-------LQDKRYKNRELQIMQML-DHPNIVA 139
           +G G++G+V  A+  ET   E VAIKK+       +  KR   REL++++    H NI  
Sbjct: 8   LGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKR-ALRELKLLRHFRGHKNITC 66

Query: 140 LKHCFFSTTDK-EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           L            ELYL    E +   +++I R+     Q +   + + + YQI   L Y
Sbjct: 67  LYDMDIVFPGNFNELYL--YEELMEADLHQIIRS----GQPLTDAHFQSFIYQILCGLKY 120

Query: 199 IH 200
           IH
Sbjct: 121 IH 122

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 44.2 bits (104), Expect = 4e-05
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 17/125 (13%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPN 136
           SY+    +G GS+  V++   R  G++VA+K V+  K  +       RE  +++ L H N
Sbjct: 6   SYLNLEKLGEGSYATVYKGISRINGQLVALK-VISMKTEEGVPFTAIREASLLKGLKHAN 64

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYV-PETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           IV L H    T +     L  V EY+  +    + ++   +H       V+L+ +Q+ R 
Sbjct: 65  IVLL-HDIIHTKET----LTFVFEYMHTDLAQYMIQHPGGLHPY----NVRLFMFQLLRG 115

Query: 196 LAYIH 200
           LAYIH
Sbjct: 116 LAYIH 120

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 19/119 (15%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPNIVALKHC 143
           +G GS G+V  A  + TG  VA+KK+  D R + R      E+ IM+   HPNIV +   
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVKKM--DLRKQQRRELLFNEVVIMRDYQHPNIVEM--- 81

Query: 144 FFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           + S    +EL+  +V+E++    +  I       H RM    +      + +AL+++H 
Sbjct: 82  YSSYLVGDELW--VVMEFLEGGALTDIV-----THTRMNEEQIATVCLAVLKALSFLHA 133

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 18/121 (14%)

Query: 89  VVGTGSFGVVFQA--KCRETGEI-VAIKKVLQDKRYKNREL-----QIMQMLDHPNIVAL 140
            +G G FG V+Q      E  +I VA+K          RE       IM+  DHP+IV L
Sbjct: 13  CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL 72

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALAYI 199
                      E  + +V+E  P       R+Y ++++  + L  + LY+YQ+  ALAY+
Sbjct: 73  IGVI------TENPVWIVMELAPLGE---LRSYLQVNKYSLDLASLILYSYQLSTALAYL 123

Query: 200 H 200
            
Sbjct: 124 E 124

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 43.6 bits (103), Expect = 9e-05
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I ++LGTP  +   + K + P YTEF     KP     +F      +A+DL+  
Sbjct: 240 IDQLGRIFELLGTPNEDNWPQAKKL-PLYTEFTP--RKPKDLKTIFPNA-SDDAIDLLQS 295

Query: 261 FFQYSPNLRCTALEACVHPFF 281
             + +P  R +A EA  H +F
Sbjct: 296 LLKLNPLERISAKEALKHEYF 316

Length = 335

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 18/45 (40%), Positives = 22/45 (48%)

Query: 237 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 281
            KP P     +  + PEA DL+ +     P  R TA EA  HPFF
Sbjct: 210 GKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 204 VDQLVEIIKVLG--TPTREEIKCMNPNYTEFKFPQIK-PHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I K LG   P+ +E+   NP +    FP+   P    + +  ++   A+D +  
Sbjct: 208 IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKA 267

Query: 261 FFQYSPNLRCTALEACVHPFF 281
             +  P  R T  E   HP+F
Sbjct: 268 CLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 43.2 bits (102), Expect = 1e-04
 Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 20/122 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALK 141
           V+G G+FG V   + + + ++ A+K + + +  K         E  IM   +   IV L 
Sbjct: 50  VIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQL- 108

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           H  F    +++ YL +V+EY+P  + VN ++ NY      +P  + + YT ++  AL  I
Sbjct: 109 HYAF----QDDKYLYMVMEYMPGGDLVNLMS-NYD-----IPEKWARFYTAEVVLALDAI 158

Query: 200 HN 201
           H+
Sbjct: 159 HS 160

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 18/99 (18%)

Query: 89  VVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNI 137
            +G G+FG VF  +C         E+VA+ K L++      ++   RE +++    H NI
Sbjct: 12  ELGEGAFGKVFLGECYHLEPENDKELVAV-KTLKETASNDARKDFEREAELLTNFQHENI 70

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSR 175
           V         T+ +     +V EY+    +N+  R++  
Sbjct: 71  VKFYGV---CTEGDPPI--MVFEYMEHGDLNKFLRSHGP 104

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 17/120 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDH---PNIVAL 140
           ++G G++G V++ K   TG +VA+K +  D    +     RE+ ++  L     PNI   
Sbjct: 8   LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKY 67

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
              +          L +++EY      R       I ++    Y+ +   ++  AL YIH
Sbjct: 68  YGSYLKGPR-----LWIIMEYAEGGSVRTLMKAGPIAEK----YISVIIREVLVALKYIH 118

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 15/118 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
           +G G+FG V++AK +ETG  +A  KV++ K  +       E++I+   +HP IV L   F
Sbjct: 20  LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF 78

Query: 145 FSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           +      +  L +++E+ P   V+ I     R     P I  ++   Q+  AL Y+H+
Sbjct: 79  Y-----WDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQI--QVICRQMLEALQYLHS 128

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.8 bits (101), Expect = 1e-04
 Identities = 37/127 (29%), Positives = 59/127 (46%), Gaps = 30/127 (23%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK---VLQD----KRYKNRELQIMQMLDHPNIV---- 138
           +G G+FGVV+       G+ VA+KK   V Q+    KR   REL+++    H N++    
Sbjct: 8   IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVF-RELKMLCFFKHDNVLSALD 66

Query: 139 ----ALKHCFFSTTDKEELYLNLVLEYVPETVNR-IARNYSRIHQRMPLIYVKLYTYQIC 193
                    F      EE+Y+  V E +   +++ I        Q +   +VK++ YQI 
Sbjct: 67  ILQPPHIDPF------EEIYV--VTELMQSDLHKIIVSP-----QPLSSDHVKVFLYQIL 113

Query: 194 RALAYIH 200
           R L Y+H
Sbjct: 114 RGLKYLH 120

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 41.9 bits (98), Expect = 2e-04
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)

Query: 205 DQLVEIIKVLGTPTREEIK--CMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           ++L  I ++LGTPT E       N  +  + FPQ +  P       RL  + +DL+    
Sbjct: 211 EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPL-INHAPRLDTDGIDLLSSLL 269

Query: 263 QYSPNLRCTALEACVHPFF 281
            Y    R +A  A  H +F
Sbjct: 270 LYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 42.3 bits (99), Expect = 2e-04
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 16/121 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNIVALKH 142
            +G GSFG ++ AK +   E   IK++      +++K    +E+ ++  + HPNIV    
Sbjct: 7   KIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVT--- 63

Query: 143 CFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            FF++  +E   L +V+EY    + + RI R    +     ++    +  QI   L +IH
Sbjct: 64  -FFASF-QENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQIL---SWFVQISLGLKHIH 118

Query: 201 N 201
           +
Sbjct: 119 D 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 42.0 bits (98), Expect = 2e-04
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 18/164 (10%)

Query: 90  VGTGSFGVVFQAKCRETGEI---VAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCF 144
           VG G++G V++AK R+ G+     A+K++          RE+ +++ L HPN++AL+  F
Sbjct: 9   VGRGTYGHVYKAK-RKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVF 67

Query: 145 FSTTDKEELYLNLVLEYVPETVNRI-----ARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
            S +D++   + L+ +Y    +  I     A   ++   ++P   VK   YQI   + Y+
Sbjct: 68  LSHSDRK---VWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124

Query: 200 HNCIV---DQLVEIIKVLGT-PTREEIKCMNPNYTEFKFPQIKP 239
           H   V   D     I V+G  P R  +K  +  +       +KP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 8/112 (7%)

Query: 203 IVDQLVEIIKVLGTPTREEI-KCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLV 258
           +V QL  I  +LGTP+ E I +  N     +     K  P    F ++ P   P A+ L+
Sbjct: 213 VVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQP--VPFSQKFPNADPLALRLL 270

Query: 259 CRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPL-FNFKPPELS 309
            R   + P  R TA EA   P+F  L     R P+ +P+  L F F+   L+
Sbjct: 271 ERLLAFDPKDRPTAEEALADPYFKGLAKVE-REPSAQPITKLEFEFERRRLT 321

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 14/120 (11%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPNIVALKH 142
           VVG G+FG+V   + +   ++V IK++  ++  K+       E Q++++L HPNI+    
Sbjct: 7   VVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYE 66

Query: 143 CFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F      E+  L +V+EY P  T+    +   R +  +    +  +  QI  AL ++H 
Sbjct: 67  NFL-----EDKALMIVMEYAPGGTLAEYIQK--RCNSLLDEDTILHFFVQILLALHHVHT 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 11/79 (13%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-----VLQDKRYKNRELQIMQMLDHPNIVALKHCF 144
           +G G+FG V++   +   E VA+K          KR   +E +I++  DHPNIV L    
Sbjct: 3   IGKGNFGDVYKGVLKGNTE-VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKL---I 58

Query: 145 FSTTDKEELYLNLVLEYVP 163
                K+ +Y  +V+E VP
Sbjct: 59  GVCVQKQPIY--IVMELVP 75

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 20/128 (15%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN--RELQIMQMLDHPNI 137
           Y+    +G GSFG     K +E G+   IK++    +  K  +   +E+ ++  + HPNI
Sbjct: 2   YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI 61

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIY----VKLYTYQIC 193
           V  +  F     +E   L +V++Y           Y +I+ +  +++    +  +  QIC
Sbjct: 62  VQYQESF-----EENGNLYIVMDYCEG-----GDLYKKINAQRGVLFPEDQILDWFVQIC 111

Query: 194 RALAYIHN 201
            AL ++H+
Sbjct: 112 LALKHVHD 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 19/90 (21%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKR-YKNRELQIMQMLDHP 135
           Y     +G+G+ G+V  A    TG+ VAIKK       V   KR Y  REL +M++++H 
Sbjct: 18  YQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAY--RELVLMKLVNHK 75

Query: 136 NIVALKHCFFSTTDK-----EELYLNLVLE 160
           NI+ L + F  T  K     +++Y  LV+E
Sbjct: 76  NIIGLLNVF--TPQKSLEEFQDVY--LVME 101

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 41.6 bits (98), Expect = 3e-04
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 34/123 (27%)

Query: 96  GVVFQAKCRETGEIVAIKKVLQDKRYKNR------ELQIMQMLDHPNIVALKHCFFSTTD 149
            +V  AK + T  +VA+KK+  D   K        E+   + L HPNI+     F     
Sbjct: 14  MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF---IV 70

Query: 150 KEELYL-----------NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             ELY+           +L+  + PE               +P + +      +  AL Y
Sbjct: 71  DSELYVVSPLMAYGSCEDLLKTHFPEG--------------LPELAIAFILKDVLNALDY 116

Query: 199 IHN 201
           IH+
Sbjct: 117 IHS 119

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 23/123 (18%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKH 142
           +G G FG V   K +      A+K V          + +   E +I++  +HP IV L +
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKL-Y 59

Query: 143 CFFSTTDKEELYLNLVLEYVPE----TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             F    K++ Y+ +++EY       T+ R    +     R        Y   +  A  Y
Sbjct: 60  RTF----KDKKYIYMLMEYCLGGELWTILRDRGLFDEYTAR-------FYIACVVLAFEY 108

Query: 199 IHN 201
           +HN
Sbjct: 109 LHN 111

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPP---EAVDLVCR 260
           + QL  I  +LGTP+ E ++                 P   V          EAV L+CR
Sbjct: 211 IQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCR 270

Query: 261 FFQYSPNLRCTALEACVHPFFDELR 285
              + P+ R +A +A  HP+ DE R
Sbjct: 271 MLVFDPDKRISAADALAHPYLDEGR 295

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 18/125 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNR------ELQIMQMLDHPNIVAL 140
           +G G+FG V+     +TG  +A+K+V         K        E+Q+++ L H  IV  
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY 69

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             C     D E L   + +EY+P       ++  + +  +     + YT QI   + Y+H
Sbjct: 70  YGCL---RDDETLS--IFMEYMP---GGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121

Query: 201 -NCIV 204
            N IV
Sbjct: 122 SNMIV 126

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 41.2 bits (96), Expect = 5e-04
 Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 22/124 (17%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY--KNRELQIM-------QMLDHPNIVA 139
           V+G GSFG V  A+ +   +  A+ KVLQ K    K  E  IM       + + HP +V 
Sbjct: 2   VIGKGSFGKVLLARHKAEEKFYAV-KVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           L H  F T DK    L  VL+Y+   E    + R    +  R      + Y  +I  AL 
Sbjct: 61  L-HFSFQTADK----LYFVLDYINGGELFYHLQRERCFLEPR-----ARFYAAEIASALG 110

Query: 198 YIHN 201
           Y+H+
Sbjct: 111 YLHS 114

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 25/128 (19%)

Query: 90  VGTGSFGVVFQAKCRE-TGEI--VAIKKVLQDKRYKN-----RELQIMQMLDHPNIVALK 141
           +G GSFGVV + +     G++  VA+K +  DK         +E  IM  LDH N++ L 
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQR----MPLIYVKLYTYQICRALA 197
               +        L +V E  P     +     R+ +       +  +  Y  QI   + 
Sbjct: 63  GVVLTHP------LMMVTELAP-----LGSLLDRLRKDALGHFLISTLCDYAVQIANGMR 111

Query: 198 YIH--NCI 203
           Y+     I
Sbjct: 112 YLESKRFI 119

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 18/127 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR---------ELQIMQMLDHPNIVA 139
           ++G G+FG V+     +TG  +A+K+V  D   +           E+Q+++ L H  IV 
Sbjct: 9   LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
              C     D EE  L++ +EY+P  ++    + Y  + + +     + YT QI + ++Y
Sbjct: 69  YYGCL---RDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENV----TRRYTRQILQGVSY 121

Query: 199 IH-NCIV 204
           +H N IV
Sbjct: 122 LHSNMIV 128

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 16/133 (12%)

Query: 80  QKVSYIAEHVVGTGSFGVVFQAK-CRETGEIVAIKKVLQDKRYKN------RELQIMQML 132
           Q+   +AE  +G G++G VF+A+  +  G  VA+K+V      +       RE+ +++ L
Sbjct: 1   QQYECVAE--IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 58

Query: 133 D---HPNIVAL-KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY 188
           +   HPN+V L   C  S TD+E   L LV E+V + +             +P   +K  
Sbjct: 59  ETFEHPNVVRLFDVCTVSRTDRET-KLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDM 115

Query: 189 TYQICRALAYIHN 201
            +Q+ R L ++H+
Sbjct: 116 MFQLLRGLDFLHS 128

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 11/124 (8%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPN 136
           +Y    VVG GS+G V   + R  G+   IKK+       ++++   +E Q++  L HPN
Sbjct: 1   AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPN 60

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           IVA +  +    + E+  L +V+ +  E  +   +   +  + +P   V  +  QI  AL
Sbjct: 61  IVAYRESW----EGEDGLLYIVMGFC-EGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL 115

Query: 197 AYIH 200
            Y+H
Sbjct: 116 QYLH 119

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 40.4 bits (94), Expect = 8e-04
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
           +G G+FG V++A+ +ETG ++A  KV+  K  +       E+ I+   DHPNIV L   F
Sbjct: 13  LGDGAFGKVYKAQNKETG-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 71

Query: 145 F 145
           +
Sbjct: 72  Y 72

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 12/82 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQ-DKRYKNR------ELQIMQMLDHPNIVALK 141
           V+G G+FG V   + ++TG I A+KK+ + +   K +      E  I+   D+P +V L 
Sbjct: 8   VIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLY 67

Query: 142 HCFFSTTDKEELYLNLVLEYVP 163
           + F     ++E YL L++EY+P
Sbjct: 68  YSF-----QDENYLYLIMEYLP 84

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 40.4 bits (94), Expect = 8e-04
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 20/127 (15%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
           Y    V+G G+FG V   + + + ++ A+K + +       D  +   E  IM   + P 
Sbjct: 45  YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 104

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           +V L  C F    +++ YL +V+EY+P  + VN ++ NY      +P  + K YT ++  
Sbjct: 105 VVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMS-NYD-----VPEKWAKFYTAEVVL 153

Query: 195 ALAYIHN 201
           AL  IH+
Sbjct: 154 ALDAIHS 160

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 23/124 (18%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR--------ELQIMQMLDHPNIVALK 141
           +G G FG V   + + TG++ A KK L  KR K R        E +I++ +    IV+L 
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKK-LDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLA 59

Query: 142 HCFFSTTDKEELYLNLV----LEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           +  F T D   L + L+    L+Y    V       +R            Y  QI   L 
Sbjct: 60  YA-FETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEAR---------AIFYAAQIICGLE 109

Query: 198 YIHN 201
           ++H 
Sbjct: 110 HLHQ 113

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 40.2 bits (94), Expect = 8e-04
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 20/122 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQM--------LDHPNIVAL 140
           V+G GS+  V   + ++T  I A+K + ++    + ++  +Q          +HP +V L
Sbjct: 2   VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGL 61

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             CF     + E  L  V+E+V   + +  + R      +++P  + + Y+ +I  AL +
Sbjct: 62  HSCF-----QTESRLFFVIEFVSGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNF 111

Query: 199 IH 200
           +H
Sbjct: 112 LH 113

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 40.4 bits (94), Expect = 8e-04
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 18/164 (10%)

Query: 90  VGTGSFGVVFQAKCRETGEI---VAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCF 144
           VG G++G V++AK R+ G+     A+K++          RE+ +++ L HPN+++L+  F
Sbjct: 9   VGRGTYGHVYKAK-RKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 67

Query: 145 FSTTDKEELYLNLVLEYVPETVNRI-----ARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
            S  D++   + L+ +Y    +  I     A   ++   ++P   VK   YQI   + Y+
Sbjct: 68  LSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 124

Query: 200 HNCIV---DQLVEIIKVLGT-PTREEIKCMNPNYTEFKFPQIKP 239
           H   V   D     I V+G  P R  +K  +  +       +KP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP 168

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 20/122 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPNIVALK 141
           V+G G+FG V   + + T ++ A+K + +       D  +   E  IM   + P +V L 
Sbjct: 50  VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           + F     +++ YL +V+EY+P  + VN ++ NY      +P  + + YT ++  AL  I
Sbjct: 110 YAF-----QDDRYLYMVMEYMPGGDLVNLMS-NYD-----VPEKWARFYTAEVVLALDAI 158

Query: 200 HN 201
           H+
Sbjct: 159 HS 160

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 20/122 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH--------PNIVAL 140
           V+G GS+  V   + ++  +I A+K V ++  + + ++  +Q   H        P +V L
Sbjct: 2   VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL 61

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             CF +T+      L LV+EYV   + +  + R      +++P  + + Y  +IC AL +
Sbjct: 62  HSCFQTTSR-----LFLVIEYVNGGDLMFHMQR-----QRKLPEEHARFYAAEICIALNF 111

Query: 199 IH 200
           +H
Sbjct: 112 LH 113

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 15/118 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALKH 142
           +G GSFG V Q + R+T  I A+K + +       E+        ++  ++ P IV LK 
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLK- 59

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             FS    E+LYL L      E  + + R       R  L   + YT ++  AL  +H
Sbjct: 60  --FSFQSPEKLYLVLAFINGGELFHHLQR-----EGRFDLSRARFYTAELLCALENLH 110

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 19/125 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
           ++G G+FG V   + + TG+  A+K + ++      E+       +++Q   HP + ALK
Sbjct: 2   LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALK 61

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           +  F T D     L  V+EY    E    ++R       R      + Y  +I  AL Y+
Sbjct: 62  YS-FQTHD----RLCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSALGYL 111

Query: 200 HNCIV 204
           H+C V
Sbjct: 112 HSCDV 116

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 18/121 (14%)

Query: 90  VGTGSFGVV----FQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVAL 140
           +G G FG V    +  +   TGE VA+K +  +    +     +E++I++ L H NIV  
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNR--IARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           K      T+     + L++E++P    +  + RN ++I+ +  L     Y  QIC+ + Y
Sbjct: 72  KGI---CTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQL----KYAVQICKGMDY 124

Query: 199 I 199
           +
Sbjct: 125 L 125

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 15/84 (17%)

Query: 89  VVGTGSFGVVFQAK----CRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIV 138
            +G G FG VF AK      E GE + + K LQ  + +N      REL + + L H N+V
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVV 71

Query: 139 ALKHCFFSTTDKEELYLNLVLEYV 162
            L        + E  Y  ++LEY 
Sbjct: 72  RL---LGLCREAEPHY--MILEYT 90

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 13/82 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKK-----VLQDKRYK--NRELQIMQML-DHPNIVAL 140
           V+G GSFG V  A+ + T E+ A+K      +LQD   +    E +++ +   HP +  L
Sbjct: 2   VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQL 61

Query: 141 KHCFFSTTDKEELYLNLVLEYV 162
            H  F T D+    L  V+EYV
Sbjct: 62  -HSCFQTKDR----LFFVMEYV 78

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 12/82 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL-------QIMQMLDHPNIVALK 141
           V+G G+FG V   + ++TG+I A+K +L+ + +K  +L        ++   D P +V+L 
Sbjct: 8   VIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLY 67

Query: 142 HCFFSTTDKEELYLNLVLEYVP 163
           + F     ++  YL L++E++P
Sbjct: 68  YSF-----QDAQYLYLIMEFLP 84

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 22/124 (17%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ---------IMQMLDHPNIVA 139
           V+G GSFG V  AK +  G   A+ KVLQ K    ++ Q         +++ L HP +V 
Sbjct: 2   VIGKGSFGKVLLAKRKSDGSFYAV-KVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           L + F +    E+LY   VL+YV   E    + R    +  R      + Y  ++  A+ 
Sbjct: 61  LHYSFQTA---EKLY--FVLDYVNGGELFFHLQRERCFLEPR-----ARFYAAEVASAIG 110

Query: 198 YIHN 201
           Y+H+
Sbjct: 111 YLHS 114

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 13/82 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKNR--ELQIMQM-LDHPNIVAL 140
           V+G GSFG V  A+ + T E+ AIK      +LQD        E +I+ +   HP + AL
Sbjct: 2   VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTAL 61

Query: 141 KHCFFSTTDKEELYLNLVLEYV 162
            HC F T D+    L  V+EYV
Sbjct: 62  -HCCFQTKDR----LFFVMEYV 78

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 18/120 (15%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKNR-----ELQIMQMLDHPNIVALKHCF 144
           G GS+G V++ K     +  A+K+V L     K R     E++I+  ++HPNI++ K  F
Sbjct: 9   GKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF 68

Query: 145 FSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTY--QICRALAYIH 200
               D  +L   +V+EY P  +    I++   R  +R  +   +++    Q+ R L  +H
Sbjct: 69  L---DGNKLC--IVMEYAPFGDLSKAISK---RKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 25/132 (18%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFFS 146
           +GTG FGVV   K R   + VAIK + +    ++    E ++M  L H  +V L   +  
Sbjct: 12  LGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQL---YGV 67

Query: 147 TTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL-YTYQICRALAY------I 199
            T +  +Y  +V EY+    N    NY R H +       L     +C  +AY      I
Sbjct: 68  CTKQRPIY--IVTEYMS---NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122

Query: 200 H------NCIVD 205
           H      NC+VD
Sbjct: 123 HRDLAARNCLVD 134

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 23/121 (19%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPNIVALKHC 143
           G G+FG V++A+ +ETG   A K +       L+D      E+ I+    HPNIV L   
Sbjct: 14  GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMV---EIDILSECKHPNIVGLYEA 70

Query: 144 FFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLI--YVKLYTYQICRALAYIH 200
           +F         L +++E+     ++ I     R      L    ++    Q+  AL ++H
Sbjct: 71  YFYENK-----LWILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLH 120

Query: 201 N 201
           +
Sbjct: 121 S 121

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (90), Expect = 0.003
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 13/76 (17%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE----------LQIMQMLDHPNIVA 139
           +G G+FG V+Q + ++T  I A+K + + +    +E          L    + + P IV 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 140 LKHCFFSTTDKEELYL 155
           LK  F + +D   LYL
Sbjct: 61  LKFSFQTDSD---LYL 73

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 38.5 bits (89), Expect = 0.003
 Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 7/72 (9%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
           +G+G++G V++A+   TGE+ AIK +     +D     +E+ +M+   H NIVA    F 
Sbjct: 17  IGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAY---FG 73

Query: 146 STTDKEELYLNL 157
           S   +++L++ +
Sbjct: 74  SYLRRDKLWICM 85

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 11/92 (11%)

Query: 76  GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQM 131
           G+ K+K  Y     +G G+ G V+ A    TG+ VAIK++ LQ +  K     E+ +M+ 
Sbjct: 15  GDPKKK--YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRE 72

Query: 132 LDHPNIVALKHCFFSTTDKEELYLNLVLEYVP 163
             HPNIV     +      +EL+  +V+EY+ 
Sbjct: 73  NKHPNIVNYLDSYLVG---DELW--VVMEYLA 99

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 38.1 bits (88), Expect = 0.003
 Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 18/137 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR---------ELQIMQMLDHPNIVA 139
           ++G G+FG V+     +TG  +A K+V  D               E+Q+++ L H  IV 
Sbjct: 9   LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ 68

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
              C     D+ E  L + +EY+P  +V    + Y  + + +     + YT QI   ++Y
Sbjct: 69  YYGCL---RDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESV----TRKYTRQILEGMSY 121

Query: 199 IH-NCIVDQLVEIIKVL 214
           +H N IV + ++   +L
Sbjct: 122 LHSNMIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 16/99 (16%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNP---NYTEFKFPQIKPHPWHKVF------------QK 248
           +DQ  +II+ LGTP+ E +  + P   NY E + P+   + + ++F             K
Sbjct: 223 IDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENR-PKYAGYSFEELFPDVLFPPDSESHNK 281

Query: 249 RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
               +A DL+ +     P  R +  +A  HP+ +   DP
Sbjct: 282 LKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDP 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 10/78 (12%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR--------ELQIMQMLDHPNIVAL 140
           V+G G FG V   + R TG++ A KK L+ KR K R        E QI++ ++   +V+L
Sbjct: 7   VLGKGGFGEVCACQVRATGKMYACKK-LEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 65

Query: 141 KHCFFSTTDKEELYLNLV 158
            +  + T D   L L L+
Sbjct: 66  AYA-YETKDALCLVLTLM 82

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.2 bits (89), Expect = 0.004
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 11/81 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
           V+G GSFG V  A+ + T E+ AIK + +D   ++ +++       ++ +   P  +   
Sbjct: 7   VLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQL 66

Query: 142 HCFFSTTDKEELYLNLVLEYV 162
           H  F T D+    L  V+EYV
Sbjct: 67  HSCFQTMDR----LYFVMEYV 83

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 38.1 bits (88), Expect = 0.004
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVL-------QDKRYKNRELQIM-QMLDHPNIVAL 140
           V+G GS+  V   + ++T  I A+K V        +D  +   E  +  Q  +HP +V L
Sbjct: 2   VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 61

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             CF     + E  L  V+EYV   + +  + R      +++P  + + Y+ +I  AL Y
Sbjct: 62  HSCF-----QTESRLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNY 111

Query: 199 IH 200
           +H
Sbjct: 112 LH 113

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 18/137 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR---------ELQIMQMLDHPNIVA 139
           ++G G+FG V+     +TG  +A+K+V  D               E+Q+++ L H  IV 
Sbjct: 9   LLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
              C     D  E  L++ +E++P  ++    ++Y  + + +     + YT QI   ++Y
Sbjct: 69  YYGCL---RDPMERTLSIFMEHMPGGSIKDQLKSYGALTENV----TRKYTRQILEGVSY 121

Query: 199 IH-NCIVDQLVEIIKVL 214
           +H N IV + ++   +L
Sbjct: 122 LHSNMIVHRDIKGANIL 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.97
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
KOG0605	550	consensus NDR and related serine/threonine kinases	99.97
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.97
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.96
KOG0198	313	consensus MEKK and related serine/threonine protei	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.96
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.96
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.96
KOG0578	550	consensus p21-activated serine/threonine protein k	99.96
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.95
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.95
PHA03209	357	serine/threonine kinase US3; Provisional	99.95
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
PHA03212	391	serine/threonine kinase US3; Provisional	99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.94
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.94
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
KOG0589	426	consensus Serine/threonine protein kinase [General	99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.94
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.94
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.94
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.94
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.94
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.94
KOG0586	596	consensus Serine/threonine protein kinase [General	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.94
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.94
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.94
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.94
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.94
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
PTZ00284	467	protein kinase; Provisional	99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.93
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.93
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.93
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.93
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.93
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.93
PHA03211	461	serine/threonine kinase US3; Provisional	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.93
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.93
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.93
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.93
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.93
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.93
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.92
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.92
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.92
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.92
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.92
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.92
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.92
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.92
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.92
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.92
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
PTZ00283	496	serine/threonine protein kinase; Provisional	99.92
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.92
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.92
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.92
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.92
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.92
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.92
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.92
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.92
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.92
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.92
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.92
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.92
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.92
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.92
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.92
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.92
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.92
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.92
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.91
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.91
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.91
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.91
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.91
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.91
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.91
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.91
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.91
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.91
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.91
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.91
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.91
KOG0584	632	consensus Serine/threonine protein kinase [General	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.91
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.91
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.91
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.91
PHA03210	501	serine/threonine kinase US3; Provisional	99.91
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.91
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.91
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.91
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.9
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.9
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.9
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.9
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.9
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.9
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.9
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.9
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.9
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.9
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.9
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.9
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.9
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.9
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.9
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.9
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.9
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.9
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.9
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.9
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.89
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.89
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.89
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.89
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.89
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.89
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.89
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.89
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.89
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.89
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.89
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.89
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.89
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.89
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.89
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.89
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.88
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.88
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.88
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.88
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.88
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.88
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.88
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.88
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.88
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.88
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.88
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.88
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.88
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.88
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.88
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.88
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.88
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.87
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.87
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.87
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.87
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.87
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.87
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.87
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.87
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.87
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.87
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.87
PHA02988	283	hypothetical protein; Provisional	99.87
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.87
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.87
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.87
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.87
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.87
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.87
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.87
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.87
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.87
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.87
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.87
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.87
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.86
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.86
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.86
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.86
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.86
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.86
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.86
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.86
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.86
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.86
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.86
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.86
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.86
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.86
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.86
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.86
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.86
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.86
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.86
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.86
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.86
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.86
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.86
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.85
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.85
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.85
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.85
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.85
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.85
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.85
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.85
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.85
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.85
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.85
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.85
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.85
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.85
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.85
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.85
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.85
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.85
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.85
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.84
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.84
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.84
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.84
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.84
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.84
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.84
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.84
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.84
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.84
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.84
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.83
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.83
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.83
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.83
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.83
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.82
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.82
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.82
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.82
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.82
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.82
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.81
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.81
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.81
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.81
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.81
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.81
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.8
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.8
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.8
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.8
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.78
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.77
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.77
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.76
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.75
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.75
KOG1152	772	consensus Signal transduction serine/threonine kin	99.74
PHA02882	294	putative serine/threonine kinase; Provisional	99.73
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.73
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.7
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.68
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.62
KOG3653	534	consensus Transforming growth factor beta/activin	99.6
PRK09188	365	serine/threonine protein kinase; Provisional	99.58
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.51
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.51
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.51
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.5
PRK10345	210	hypothetical protein; Provisional	99.48
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.46
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.45
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.45
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.45
smart00090	237	RIO RIO-like kinase.	99.35
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.34
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.31
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.29
PRK14879	211	serine/threonine protein kinase; Provisional	99.22
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.21
PLN00181	793	protein SPA1-RELATED; Provisional	99.12
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.11
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.02
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.97
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.96
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.93
PRK12274	218	serine/threonine protein kinase; Provisional	98.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.9
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.88
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.84
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.82
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.8
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.79
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.79
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.75
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.73
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.7
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.49
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.41
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.38
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.22
KOG1243	690	consensus Protein kinase [General function predict	98.16
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.08
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.97
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.89
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.79
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.78
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.71
KOG3087	229	consensus Serine/threonine protein kinase [General	97.18
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.14
PF01636	239	APH: Phosphotransferase enzyme family This family	97.06
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.04
PLN02876	822	acyl-CoA dehydrogenase	97.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.85
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	96.84
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.46
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	96.43
PRK10593	297	hypothetical protein; Provisional	96.37
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.35
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	96.29
PRK09902	216	hypothetical protein; Provisional	95.89
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.85
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.78
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	95.58
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.51
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.04
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	94.91
PRK09550	401	mtnK methylthioribose kinase; Reviewed	94.83
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	94.44
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	94.18
KOG1235	538	consensus Predicted unusual protein kinase [Genera	93.53
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.39
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	92.83
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.65
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	92.34
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	90.96
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	90.56
KOG2270	520	consensus Serine/threonine protein kinase involved	89.65
PLN02756	418	S-methyl-5-thioribose kinase	88.74
PRK12396	409	5-methylribose kinase; Reviewed	88.58
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	86.41
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	85.92
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	85.56
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	85.45
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	85.07
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	84.62
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	82.84

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.4e-44  Score=304.78  Aligned_cols=268  Identities=69%  Similarity=1.088  Sum_probs=244.8

Q ss_pred             CceEEeeccCCCCCccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeecee
Q 019844           64 GHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHC  143 (335)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~  143 (335)
                      +........+..........|...+++|.|+||.||+|....+++.||||.+..+.+...+|+++|+.++|||||++..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~   85 (364)
T KOG0658|consen    6 GHVIQTVAEGRNDGKKVEISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYF   85 (364)
T ss_pred             eeEEEEEeecCCCCcceEEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEE
Confidence            34445555566666677788999999999999999999999999999999999988899999999999999999999999


Q ss_pred             eeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------
Q 019844          144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------  203 (335)
Q Consensus       144 ~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------  203 (335)
                      |....+.++.++.+|||||+.+|.+.++.+...+..++.-.++-|.+||++||.|||+.|                    
T Consensus        86 f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~L  165 (364)
T KOG0658|consen   86 FSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVL  165 (364)
T ss_pred             EEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeE
Confidence            987665557789999999999999999988777889999999999999999999999988                    


Q ss_pred             ------------------------------------------------------------------cChHHhHhhhcCCC
Q 019844          204 ------------------------------------------------------------------VDQLVEIIKVLGTP  217 (335)
Q Consensus       204 ------------------------------------------------------------------~~~~~~~~~~~g~~  217 (335)
                                                                                        .+++..++..+|+|
T Consensus       166 KicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P  245 (364)
T KOG0658|consen  166 KICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP  245 (364)
T ss_pred             EeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence                                                                              78899999999999


Q ss_pred             CHHHhhhhCCCCCCCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCC
Q 019844          218 TREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL  297 (335)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~  297 (335)
                      +.+++.+++++|..+.++++...+|...+....++++.+|+.++|+++|.+|.++.|+|.||||.+++.|...+++++++
T Consensus       246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~~~l~~g~~l  325 (364)
T KOG0658|consen  246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPNTKLPNGRPL  325 (364)
T ss_pred             CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcCccCcCCCcC
Confidence            99999999999999999999999999877789999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccCCCCCHHHHhhcChHHHhhcccccc
Q 019844          298 PPLFNFKPPELSGIPPETINRLIPEHARKQNLFMA  332 (335)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (335)
                      |++++|+.. .....++.+..++++++++......
T Consensus       326 p~lf~f~~~-e~~~~~~~~~~l~p~~~~~~~~~~~  359 (364)
T KOG0658|consen  326 PPLFNFKRA-ELGISPELVNVLIPEHLREQEKDKI  359 (364)
T ss_pred             CCccCchHH-HhccchHHHHhhccHhhhhhccccc
Confidence            999999955 7778889999999999888765443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-37  Score=264.45  Aligned_cols=233  Identities=31%  Similarity=0.506  Sum_probs=197.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .+|..++.||+|+||.|+.+.++.+|+.||||+|..      ..++..||+.+|+.++|+||+.+++++.........-+
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv  101 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV  101 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence            357778999999999999999999999999999962      34677899999999999999999999977444556669


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------------  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------------  203 (335)
                      |+|+|+|+.||.++++.    .+.+++..++.+++||++||+|+|+.+                                
T Consensus       102 YiV~elMetDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen  102 YLVFELMETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             EEehhHHhhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence            99999999999999997    566999999999999999999999988                                


Q ss_pred             --------------------------------------------------------cChHHhHhhhcCCCCHHHhhhhCC
Q 019844          204 --------------------------------------------------------VDQLVEIIKVLGTPTREEIKCMNP  227 (335)
Q Consensus       204 --------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~  227 (335)
                                                                              ++++..+...+|+|..+.+.....
T Consensus       178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s  257 (359)
T KOG0660|consen  178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS  257 (359)
T ss_pred             cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence                                                                    678888888999998888776542


Q ss_pred             CCC-C--CCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019844          228 NYT-E--FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK  304 (335)
Q Consensus       228 ~~~-~--~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~  304 (335)
                      ... .  ..++.....+|...| +..++.+.||+.+||.+||.+|+|++|+|+||||..+.+|.+++.....   .+.+ 
T Consensus       258 ~~ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~---~~~~-  332 (359)
T KOG0660|consen  258 EKARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPI---FDSF-  332 (359)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCC---Cccc-
Confidence            211 1  156777888999999 5999999999999999999999999999999999999999988654221   1123 


Q ss_pred             cccCCCCCHHHHhhcChHHHhh
Q 019844          305 PPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                        +.. ++.+.|++++|+|+..
T Consensus       333 --~~~-~~~~~~r~~i~~e~~~  351 (359)
T KOG0660|consen  333 --EHE-LTEEELRELIYKEILD  351 (359)
T ss_pred             --ccc-ccHHHHHHHHHHHHHh
Confidence              233 8899999999998764

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.9e-37  Score=266.52  Aligned_cols=200  Identities=29%  Similarity=0.378  Sum_probs=156.2

Q ss_pred             CccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----------hhHHHHHHHHHhCCCCceeeeceeee
Q 019844           77 NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----------RYKNRELQIMQMLDHPNIVALKHCFF  145 (335)
Q Consensus        77 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~Ei~~l~~l~hpnIv~~~~~~~  145 (335)
                      .....+.|.+.+.||+|+||.|.+|..+.||+.||||+|.+..           ..+.+|+++|++|+|||||+++++| 
T Consensus       167 pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f-  245 (475)
T KOG0615|consen  167 PKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF-  245 (475)
T ss_pred             cchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee-
Confidence            3346678999999999999999999999999999999996421           2356999999999999999999999 


Q ss_pred             eCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------
Q 019844          146 STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------  203 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------  203 (335)
                          ....+.||||||++| +|.+.+-.    ++.+.|...+.+++||+.||.|||++|                     
T Consensus       246 ----~~~ds~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~l  317 (475)
T KOG0615|consen  246 ----EVPDSSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCL  317 (475)
T ss_pred             ----ecCCceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceE
Confidence                666678999999996 99998887    778999999999999999999999999                     


Q ss_pred             -----------cChHHhHhhhcCCCCHHHhhhh---CCC---------------------CCCCC----CC----CC--C
Q 019844          204 -----------VDQLVEIIKVLGTPTREEIKCM---NPN---------------------YTEFK----FP----QI--K  238 (335)
Q Consensus       204 -----------~~~~~~~~~~~g~~~~~~~~~~---~~~---------------------~~~~~----~~----~~--~  238 (335)
                                 ......+.++||||.|......   ...                     |.+|.    -+    ++  .
T Consensus       318 lKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G  397 (475)
T KOG0615|consen  318 LKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG  397 (475)
T ss_pred             EEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC
Confidence                       1112223467888874332211   111                     11110    00    00  1


Q ss_pred             CCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          239 PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       239 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ...+.+..|..+++++.+||.+||..||++|||++++|+||||+...
T Consensus       398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            11233456678999999999999999999999999999999999764

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-36  Score=273.37  Aligned_cols=198  Identities=25%  Similarity=0.393  Sum_probs=152.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+|..++.||+|+|+.||.+++..+|+.||+|+|.+.       ...+.+||+|++.|+|||||++|++|     ++..+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCCc
Confidence            5799999999999999999999999999999999752       35678999999999999999999999     88888


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------cChH-------------
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------VDQL-------------  207 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------~~~~-------------  207 (335)
                      +|||+|+|. |+|..+++.    ++.++|.+|++|++||+.||.|||+++             .+.+             
T Consensus        93 VYivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l  168 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQL  168 (592)
T ss_pred             eEEEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeee
Confidence            999999999 699999886    788999999999999999999999998             1111             


Q ss_pred             ----HhHhhhcCCCCHHHhhhhCC---------------CCCC-CCCCCCCCCccc----------cccccCCChHHHHH
Q 019844          208 ----VEIIKVLGTPTREEIKCMNP---------------NYTE-FKFPQIKPHPWH----------KVFQKRLPPEAVDL  257 (335)
Q Consensus       208 ----~~~~~~~g~~~~~~~~~~~~---------------~~~~-~~~~~~~~~~~~----------~~~~~~~s~~~~~l  257 (335)
                          ....++||||.|...+...-               -|.. ...|......+.          ..+|..+|.++++|
T Consensus       169 e~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dL  248 (592)
T KOG0575|consen  169 EYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDL  248 (592)
T ss_pred             cCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHH
Confidence                22234455555322111110               0000 011111111111          23567899999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      |++||..||.+|||++++|.|+||..-.-|.
T Consensus       249 I~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~  279 (592)
T KOG0575|consen  249 IRKLLRPNPSERPSLDEVLDHPFFKSGFTPA  279 (592)
T ss_pred             HHHHhcCCcccCCCHHHHhcCHhhhCCCcCC
Confidence            9999999999999999999999995544443

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-37  Score=271.16  Aligned_cols=199  Identities=33%  Similarity=0.529  Sum_probs=171.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccch-----hHHHHHHHHHhCC-CCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-----YKNRELQIMQMLD-HPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-----~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .-+||.++++||.|+||.||+|+.+.+|..||||.+++...     .-.||+..|++|+ |||||++.+++.+.    +.
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~----~~   83 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN----DR   83 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc----Cc
Confidence            34679999999999999999999999999999999975431     2349999999998 99999999999532    22


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      .+|+|||||+.+|+++++..   +..|+|..++.|++||+.||+|+|.+|                              
T Consensus        84 ~L~fVfE~Md~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   84 ILYFVFEFMDCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             eEeeeHHhhhhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccc
Confidence            79999999999999999973   577999999999999999999999999                              


Q ss_pred             -------------------------------------------------------cChHHhHhhhcCCCCHHHhhhh--C
Q 019844          204 -------------------------------------------------------VDQLVEIIKVLGTPTREEIKCM--N  226 (335)
Q Consensus       204 -------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~--~  226 (335)
                                                                             +|++.++..++|+|....|..+  .
T Consensus       161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L  240 (538)
T KOG0661|consen  161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL  240 (538)
T ss_pred             ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence                                                                   7889999999999997776543  1


Q ss_pred             CCCCCCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          227 PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      .....+.++.....++...++. +++++.+||.+||.+||.+||||.++|+||||+....
T Consensus       241 a~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~  299 (538)
T KOG0661|consen  241 ASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA  299 (538)
T ss_pred             HHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence            2234567888888888888855 9999999999999999999999999999999986543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.6e-35  Score=242.39  Aligned_cols=196  Identities=34%  Similarity=0.588  Sum_probs=168.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|...++||+|+||.||+|++..||+.||||+|+...      ....|||.+|+.++|+||+.++++|     .....+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F-----~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF-----PHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc-----cCCCce
Confidence            46999999999999999999999999999999997432      3467999999999999999999999     666669


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------------  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------------  203 (335)
                      .||+|||+.||...++..   ...++..+++.|+.+++.||+|||.+.                                
T Consensus        77 ~lVfEfm~tdLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~  153 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS  153 (318)
T ss_pred             EEEEEeccccHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence            999999999999999863   567999999999999999999999876                                


Q ss_pred             ------------------------------------------------------cChHHhHhhhcCCCCHHHhhhh--CC
Q 019844          204 ------------------------------------------------------VDQLVEIIKVLGTPTREEIKCM--NP  227 (335)
Q Consensus       204 ------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~--~~  227 (335)
                                                                            ++|+..++..+|||.+..|..+  -|
T Consensus       154 p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lp  233 (318)
T KOG0659|consen  154 PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLP  233 (318)
T ss_pred             CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccc
Confidence                                                                  7889999999999999999876  36


Q ss_pred             CCCCCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          228 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      .|..+.  .....+....| +..++++.||+.+||.+||.+|+|+.|+|+|+||+....|.
T Consensus       234 dY~~~~--~~P~~~~~~lf-~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt  291 (318)
T KOG0659|consen  234 DYVKIQ--QFPKPPLNNLF-PAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPT  291 (318)
T ss_pred             cHHHHh--cCCCCcccccc-ccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCC
Confidence            666544  23333444456 67888999999999999999999999999999999865543

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=5.1e-34  Score=265.47  Aligned_cols=246  Identities=41%  Similarity=0.767  Sum_probs=184.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCC---CCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTT---DKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~---~~~~~~~~i  157 (335)
                      ..+|++++.||+|+||.||+|.+..+++.||||++........+|+.+|+.++|||||+++++|+...   .....++++
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~l  144 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNV  144 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEE
Confidence            34699999999999999999999999999999999776667779999999999999999999886432   123456889


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC--hHHhHhhh----------
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD--QLVEIIKV----------  213 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~--~~~~~~~~----------  213 (335)
                      ||||++++|.+++.........+++..++.|+.||+.||.|||+++            ++  .....+..          
T Consensus       145 vmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~  224 (440)
T PTZ00036        145 VMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG  224 (440)
T ss_pred             EEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC
Confidence            9999999998888766555678999999999999999999999988            10  00000111          


Q ss_pred             ------cCCCC---HHHhh----------------------hhCC-------------------------------CCCC
Q 019844          214 ------LGTPT---REEIK----------------------CMNP-------------------------------NYTE  231 (335)
Q Consensus       214 ------~g~~~---~~~~~----------------------~~~~-------------------------------~~~~  231 (335)
                            .|++.   ++.+.                      .+.+                               .|..
T Consensus       225 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~  304 (440)
T PTZ00036        225 QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYAD  304 (440)
T ss_pred             CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhc
Confidence                  12211   11110                      0011                               1111


Q ss_pred             CCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCC-CCCCCCCCCCCcccCCC
Q 019844          232 FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPN-GRPLPPLFNFKPPELSG  310 (335)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  310 (335)
                      ..++......+...++...++++.+||.+||++||.+|||+.|+|+||||..+..+....+. ...+|.+++|...++..
T Consensus       305 ~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  384 (440)
T PTZ00036        305 IKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRDPCIKLPKYIDKLPDLFNFCDAEIKE  384 (440)
T ss_pred             ccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhcccccCCCCCCCCCCCcCCCHHHHhh
Confidence            12222223334445566788999999999999999999999999999999998876655554 35678889999888888


Q ss_pred             CCHHHHhhcChHHHhh
Q 019844          311 IPPETINRLIPEHARK  326 (335)
Q Consensus       311 ~~~~~~~~~~~~~~~~  326 (335)
                      +..+..+.+++....+
T Consensus       385 ~~~~~~~~~~~~~~~~  400 (440)
T PTZ00036        385 MSDACRRKIIPKCTYE  400 (440)
T ss_pred             CCHHHHHHHhhHHHHH
Confidence            8988888888775554

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1e-34  Score=256.65  Aligned_cols=199  Identities=31%  Similarity=0.443  Sum_probs=164.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+.|+.+++||+|+||.||+|++..||+.||+|+|+.+.      ....|||.||++|+|||||++.+..+..   ..
T Consensus       114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~  190 (560)
T KOG0600|consen  114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LS  190 (560)
T ss_pred             cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CC
Confidence            34567999999999999999999999999999999997443      4467999999999999999999998653   34


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      ..+|+|+|||+.||..++..-   .-.|++.++++|++||+.||+|||++|                             
T Consensus       191 ~siYlVFeYMdhDL~GLl~~p---~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~  267 (560)
T KOG0600|consen  191 GSIYLVFEYMDHDLSGLLSSP---GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARF  267 (560)
T ss_pred             ceEEEEEecccchhhhhhcCC---CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceee
Confidence            569999999999999988752   346999999999999999999999988                             


Q ss_pred             ----------------------------------------------------------cChHHhHhhhcCCCCHHHhhhh
Q 019844          204 ----------------------------------------------------------VDQLVEIIKVLGTPTREEIKCM  225 (335)
Q Consensus       204 ----------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~  225 (335)
                                                                                ++|+..|+.+||+|....|...
T Consensus       268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~  347 (560)
T KOG0600|consen  268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS  347 (560)
T ss_pred             ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence                                                                      7889999999999998887633


Q ss_pred             -CCCCCCCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          226 -NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       226 -~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                       .|.+..+.-...-...+.+.+ ..+++.+.+|+..||+.||.+|.||.++|+|+||..-
T Consensus       348 kLP~~~~~kp~~~y~r~l~E~~-~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  348 KLPHATIFKPQQPYKRRLRETF-KDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             cCCcccccCCCCcccchHHHHh-ccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence             233333322222223334444 6789999999999999999999999999999999544

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.6e-34  Score=242.27  Aligned_cols=204  Identities=28%  Similarity=0.434  Sum_probs=168.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccch------hHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR------YKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~------~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +..+.|+.+..|++|+||+||+|+++.|++.||+|+++-+..      ...|||.+|.+++|||||.+..+..-   .+-
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG---~~~  149 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG---SNM  149 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec---ccc
Confidence            344579999999999999999999999999999999974332      24699999999999999999998753   233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      ..+|||||||+.||..++...   .++|...+++.++.|++.||+|||.+.                             
T Consensus       150 d~iy~VMe~~EhDLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  150 DKIYIVMEYVEHDLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLARE  226 (419)
T ss_pred             ceeeeeHHHHHhhHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhh
Confidence            448999999999999999974   368999999999999999999999876                             


Q ss_pred             ---------------------------------------------------------cChHHhHhhhcCCCCHHHhhhhC
Q 019844          204 ---------------------------------------------------------VDQLVEIIKVLGTPTREEIKCMN  226 (335)
Q Consensus       204 ---------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~  226 (335)
                                                                               ++++..|+..+|+|....|....
T Consensus       227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~  306 (419)
T KOG0663|consen  227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS  306 (419)
T ss_pred             hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence                                                                     78889999999999977775442


Q ss_pred             --CCCCCCCCCCCCCCccccccccC-CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          227 --PNYTEFKFPQIKPHPWHKVFQKR-LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       227 --~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                        |......++......+...|+.. +++...+|++.+|.+||.+|.||.|+|+|+||.+.+.|.
T Consensus       307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~  371 (419)
T KOG0663|consen  307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPI  371 (419)
T ss_pred             ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCC
Confidence              22223345555555566666544 789999999999999999999999999999999976543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-32  Score=234.79  Aligned_cols=201  Identities=24%  Similarity=0.411  Sum_probs=149.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..+.+.++.||+|+.|+||+|+|+.|++.+|+|+|..+     .+++.+|+++++.++||+||.+|++|+....    .+
T Consensus        78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~i  153 (364)
T KOG0581|consen   78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EI  153 (364)
T ss_pred             HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eE
Confidence            34678899999999999999999999999999999422     3667899999999999999999999965431    48


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC-cC-------------------------hH
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI-VD-------------------------QL  207 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~-~~-------------------------~~  207 (335)
                      +|+||||+| +|.+++..    .++++|.....|+.+|++||.|||+ .+ ++                         .+
T Consensus       154 sI~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l  229 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL  229 (364)
T ss_pred             EeehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence            899999995 99999987    5789999999999999999999996 44 00                         00


Q ss_pred             H--hHhhhcCCCCHHHhhhhCC-CCC------------------CCCCCCCC--CCcc-----------ccccccC-CCh
Q 019844          208 V--EIIKVLGTPTREEIKCMNP-NYT------------------EFKFPQIK--PHPW-----------HKVFQKR-LPP  252 (335)
Q Consensus       208 ~--~~~~~~g~~~~~~~~~~~~-~~~------------------~~~~~~~~--~~~~-----------~~~~~~~-~s~  252 (335)
                      .  ...+..||..|...+...- .|.                  .|.++...  ...|           ...+|.. +|+
T Consensus       230 vnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~  309 (364)
T KOG0581|consen  230 VNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSP  309 (364)
T ss_pred             hhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCH
Confidence            0  1123456655333221110 111                  11222110  0111           1223444 899


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      ++++||..||++||.+|+++.|+|+|||++....+..
T Consensus       310 ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~v  346 (364)
T KOG0581|consen  310 EFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNV  346 (364)
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccc
Confidence            9999999999999999999999999999998765443

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.2e-32  Score=229.52  Aligned_cols=194  Identities=31%  Similarity=0.549  Sum_probs=147.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|+.+.++|+|+||+||+|+++.||+.||||++..+.      +...|||++|++|+|||+|.++++|     ..+..+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl   76 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL   76 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence            35899999999999999999999999999999985322      4467999999999999999999999     777779


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------------  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------------  203 (335)
                      ++|+|||+.++.+-+..+   ...++...++.|++|++.|+.|+|+++                                
T Consensus        77 hLVFE~~dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~  153 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA  153 (396)
T ss_pred             EEEeeecchHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence            999999998776666654   466999999999999999999999998                                


Q ss_pred             ------------------------------------------------------cChHHhHhhhcCCCCHHHhh--hhCC
Q 019844          204 ------------------------------------------------------VDQLVEIIKVLGTPTREEIK--CMNP  227 (335)
Q Consensus       204 ------------------------------------------------------~~~~~~~~~~~g~~~~~~~~--~~~~  227 (335)
                                                                            +|++..|...+|...+....  ..+|
T Consensus       154 pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~  233 (396)
T KOG0593|consen  154 PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNP  233 (396)
T ss_pred             CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCC
Confidence                                                                  22222222222222222111  1122


Q ss_pred             CCCCCCCCCCC-CCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          228 NYTEFKFPQIK-PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       228 ~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      -|....+|... ..+.+..+ +.++.-+.||+++||+.||++|++.+++|.|+||..+
T Consensus       234 ~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~  290 (396)
T KOG0593|consen  234 FFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGF  290 (396)
T ss_pred             ceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHH
Confidence            22222333221 12333444 5678899999999999999999999999999999664

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.9e-31  Score=241.56  Aligned_cols=196  Identities=28%  Similarity=0.410  Sum_probs=155.2

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      |++++.||.|+-|.|.+|++..||+..|||+|.+.       ...+.+||-||+.+.||||+++|++|     .++.++|
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~~~ly   88 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENKQHLY   88 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccCceEE
Confidence            99999999999999999999999999999999865       34578999999999999999999999     7778899


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChHH-hHhhhcCCCCH---
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQLV-EIIKVLGTPTR---  219 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~~-~~~~~~g~~~~---  219 (335)
                      +|+||++| .|++++..    +++++|.++..+++||+.|+.|||..+            ++.-. ..+..+|...-   
T Consensus        89 lvlEyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~  164 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP  164 (786)
T ss_pred             EEEEecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence            99999995 99999887    889999999999999999999999988            11000 11122333221   


Q ss_pred             ---HHhhhhCCCCCCCC------CCCCCCCccc-------------------------------cccccCCChHHHHHHH
Q 019844          220 ---EEIKCMNPNYTEFK------FPQIKPHPWH-------------------------------KVFQKRLPPEAVDLVC  259 (335)
Q Consensus       220 ---~~~~~~~~~~~~~~------~~~~~~~~~~-------------------------------~~~~~~~s~~~~~li~  259 (335)
                         ....|+.|.|...+      +...+.+.|.                               ...|..+|+++.+||+
T Consensus       165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr  244 (786)
T KOG0588|consen  165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLR  244 (786)
T ss_pred             CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHH
Confidence               12235555554321      1122233332                               1245789999999999


Q ss_pred             HhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          260 RFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       260 ~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      +||..||.+|+|.+||++|||+..+..+.
T Consensus       245 ~ml~VDp~~RiT~~eI~kHP~l~g~~~~~  273 (786)
T KOG0588|consen  245 RMLDVDPSTRITTEEILKHPFLSGYTSLP  273 (786)
T ss_pred             HHhccCccccccHHHHhhCchhhcCCCCC
Confidence            99999999999999999999999886643

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.97  E-value=6.1e-31  Score=234.60  Aligned_cols=202  Identities=25%  Similarity=0.383  Sum_probs=155.7

Q ss_pred             ccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-------cchhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           78 SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        78 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-------~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .+...+|.+++.||.|+|++|++|+++.+++.||||++.+       ..+++.+|-.+|..| +||.||+||..|     
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF-----  143 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF-----  143 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence            3455679999999999999999999999999999999854       346788999999999 899999999999     


Q ss_pred             CCccEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-------------ChHHhH-----
Q 019844          150 KEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-------------DQLVEI-----  210 (335)
Q Consensus       150 ~~~~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-------------~~~~~~-----  210 (335)
                      +++..+|+|+||++ |+|.++|+.    .+.|+|..+++|+.||+.||+|||++|+             ......     
T Consensus       144 QD~~sLYFvLe~A~nGdll~~i~K----~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFG  219 (604)
T KOG0592|consen  144 QDEESLYFVLEYAPNGDLLDLIKK----YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFG  219 (604)
T ss_pred             ecccceEEEEEecCCCcHHHHHHH----hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecc
Confidence            77777999999999 599999998    5789999999999999999999999990             001111     


Q ss_pred             -------------------------hhhcCCCCHHHhhhhCCCCCCC----------------CCCCCC-CC--------
Q 019844          211 -------------------------IKVLGTPTREEIKCMNPNYTEF----------------KFPQIK-PH--------  240 (335)
Q Consensus       211 -------------------------~~~~g~~~~~~~~~~~~~~~~~----------------~~~~~~-~~--------  240 (335)
                                               ..++||..|...+.++..+..+                ..|... ..        
T Consensus       220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI  299 (604)
T KOG0592|consen  220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI  299 (604)
T ss_pred             ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence                                     2234444432222111111110                000000 00        


Q ss_pred             -ccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          241 -PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       241 -~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                       .....|++.+++.++|||+++|..||++|+|+.+|.+||||..+.|..
T Consensus       300 ~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  300 QALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             HHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence             111246788999999999999999999999999999999999998743

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=7.8e-33  Score=224.27  Aligned_cols=196  Identities=29%  Similarity=0.320  Sum_probs=148.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+.|.+.++||+|+|+.||+|.++.||+.+|+|+|..      +.+.+.+|+.|.+.|+|||||++.+.+     ...
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~   82 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEE   82 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----ccc
Confidence            455679999999999999999999999999999999853      336678999999999999999999999     888


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------  203 (335)
                      .+.|||+|+|.| +|..-+-.    +..++|..+..+++||+.||.|+|.++                            
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FG  158 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFG  158 (355)
T ss_pred             ceeEEEEecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccc
Confidence            889999999997 76544433    345899999999999999999999998                            


Q ss_pred             ----cChHHhHhhhcCCCCHHH---------------hhhhC------CCCCCCC-------CCCC--CCCccccccccC
Q 019844          204 ----VDQLVEIIKVLGTPTREE---------------IKCMN------PNYTEFK-------FPQI--KPHPWHKVFQKR  249 (335)
Q Consensus       204 ----~~~~~~~~~~~g~~~~~~---------------~~~~~------~~~~~~~-------~~~~--~~~~~~~~~~~~  249 (335)
                          +..........|+|.+..               |.|+.      .+|.+|-       +..+  ....+....|..
T Consensus       159 vAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~  238 (355)
T KOG0033|consen  159 LAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDT  238 (355)
T ss_pred             eEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCc
Confidence                111112223455555221               11110      0111110       0011  112333446688


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      +++++++||++||..||.+|+|+.|+|+|||+.+
T Consensus       239 is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  239 VTPEAKSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             CCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            9999999999999999999999999999999976

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=3.6e-30  Score=222.98  Aligned_cols=117  Identities=24%  Similarity=0.411  Sum_probs=106.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ....|++++.||+|.-|+||+|+.+.++..+|+|++.+.       ..++..|.+||+.++||.++.+|..|     +..
T Consensus        75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-----et~  149 (459)
T KOG0610|consen   75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-----ETD  149 (459)
T ss_pred             CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee-----ecc
Confidence            345699999999999999999999999999999999753       24567899999999999999999999     888


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+.|++||||+| ||..+.+...  .+.|++..+++|+.+|+.||+|||.+|
T Consensus       150 ~~~cl~meyCpGGdL~~LrqkQp--~~~fse~~aRFYaAEvl~ALEYLHmlG  199 (459)
T KOG0610|consen  150 KYSCLVMEYCPGGDLHSLRQKQP--GKRFSESAARFYAAEVLLALEYLHMLG  199 (459)
T ss_pred             ceeEEEEecCCCccHHHHHhhCC--CCccchhhHHHHHHHHHHHHHHHHhhc
Confidence            889999999996 9999988755  778999999999999999999999999

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=2.9e-31  Score=237.48  Aligned_cols=192  Identities=25%  Similarity=0.377  Sum_probs=147.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|.+.+.||+|+||.||+|+.+.|.+.||+|.|.|..      +.+.+|++|++.|+|||||.++++|     +...++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence            35999999999999999999999999999999996532      4478999999999999999999999     777789


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC----------------------hH------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD----------------------QL------  207 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~----------------------~~------  207 (335)
                      |+|+|||.|+|..++..    .+.++|+.++.|+.+++.||.|||++++-                      .+      
T Consensus        77 ~vVte~a~g~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~  152 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST  152 (808)
T ss_pred             EEEehhhhhhHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence            99999999999999998    78899999999999999999999999810                      00      


Q ss_pred             --HhHhhhcCCCCHHHhhhh------------------------CCCCCCCCCCC----CCCCccccccccCCChHHHHH
Q 019844          208 --VEIIKVLGTPTREEIKCM------------------------NPNYTEFKFPQ----IKPHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       208 --~~~~~~~g~~~~~~~~~~------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~s~~~~~l  257 (335)
                        .....+-|||.|......                        .|.|..-.+..    +...+  ...|...+..+++|
T Consensus       153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~--v~~p~~~S~~f~nf  230 (808)
T KOG0597|consen  153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP--VKPPSTASSSFVNF  230 (808)
T ss_pred             CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC--CCCcccccHHHHHH
Confidence              011123456553221111                        11111000000    00000  11235789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      |+++|.+||.+|+|+.++|.|||++.-
T Consensus       231 l~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  231 LQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             HHHHhhcChhhcccHHHHhcChHHhhh
Confidence            999999999999999999999998764

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.97  E-value=9.7e-31  Score=224.12  Aligned_cols=199  Identities=27%  Similarity=0.343  Sum_probs=153.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|+++++||+|+||+|++++.+.|++.||+|+++|.       .+....|..||..++||+||+++..|     ++
T Consensus        22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-----Qt   96 (357)
T KOG0598|consen   22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-----QT   96 (357)
T ss_pred             CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec-----cc
Confidence            3456799999999999999999999999999999999653       35577899999999999999999999     77


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------------  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------  203 (335)
                      ...+|+|+||+.| +|...|.+    .+.|+|..++.|+.+|+.||.|||++|                           
T Consensus        97 ~~kLylVld~~~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~  172 (357)
T KOG0598|consen   97 EEKLYLVLDYLNGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLC  172 (357)
T ss_pred             CCeEEEEEeccCCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccc
Confidence            7889999999996 99999987    788999999999999999999999999                           


Q ss_pred             ---cChHHhHhhhcCCCCHHHhhh------------------------hCCCCCCCCCC----CCCCCccccccccCCCh
Q 019844          204 ---VDQLVEIIKVLGTPTREEIKC------------------------MNPNYTEFKFP----QIKPHPWHKVFQKRLPP  252 (335)
Q Consensus       204 ---~~~~~~~~~~~g~~~~~~~~~------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~s~  252 (335)
                         ...-....++|||+.|.....                        +.|.|......    .+.... ....+..++.
T Consensus       173 k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~  251 (357)
T KOG0598|consen  173 KEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSE  251 (357)
T ss_pred             hhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCH
Confidence               111112234577776432211                        11111110000    000000 0123345899


Q ss_pred             HHHHHHHHhccCCCCCCC----CHHHHhcCcccccCCCC
Q 019844          253 EAVDLVCRFFQYSPNLRC----TALEACVHPFFDELRDP  287 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~----t~~~~L~hp~f~~~~~~  287 (335)
                      ++++||+++|+.||++|.    .+.++-+||||..+.|.
T Consensus       252 ~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  252 EARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             HHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence            999999999999999996    68999999999998873

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=215.96  Aligned_cols=197  Identities=23%  Similarity=0.344  Sum_probs=154.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++++.||.|+||.|.+++++.+|..||+|++.+.       .+....|..+|+.+.||+++++++.|     .+.
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~  116 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDN  116 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccC
Confidence            345699999999999999999999999999999999753       24567899999999999999999999     778


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC--------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD--------------  205 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~--------------  205 (335)
                      .++||||||++| .|..+++.    .++|++..+++|+.||+.||+|||+++            ++              
T Consensus       117 ~~lymvmeyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK  192 (355)
T KOG0616|consen  117 SNLYMVMEYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAK  192 (355)
T ss_pred             CeEEEEEeccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceE
Confidence            889999999996 99999987    788999999999999999999999998            11              


Q ss_pred             -hHHhHhhhcCCCCHHHhhhh---------------------CCCCCCCCCCCCCCCcc------ccccccCCChHHHHH
Q 019844          206 -QLVEIIKVLGTPTREEIKCM---------------------NPNYTEFKFPQIKPHPW------HKVFQKRLPPEAVDL  257 (335)
Q Consensus       206 -~~~~~~~~~g~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~------~~~~~~~~s~~~~~l  257 (335)
                       --..+.++||||.+......                     ..+|.+|...+ ....+      .-.||..++++++||
T Consensus       193 ~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~-~~~iY~KI~~~~v~fP~~fs~~~kdL  271 (355)
T KOG0616|consen  193 RVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN-PIQIYEKILEGKVKFPSYFSSDAKDL  271 (355)
T ss_pred             EecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC-hHHHHHHHHhCcccCCcccCHHHHHH
Confidence             11124567888874322111                     11111111000 01111      124678899999999


Q ss_pred             HHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      |.++|+.|-.+|.     ...+|.+||||+.+.|
T Consensus       272 l~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W  305 (355)
T KOG0616|consen  272 LKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW  305 (355)
T ss_pred             HHHHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence            9999999999995     4789999999998876

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.97  E-value=8.7e-30  Score=227.19  Aligned_cols=116  Identities=26%  Similarity=0.404  Sum_probs=107.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|+++++||+|+||.||+|+.+.||..||+|++++.       ...+..|..+|...++|+||++|..|     ++
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-----QD  212 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-----QD  212 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe-----cC
Confidence            3556899999999999999999999999999999999764       25577899999999999999999999     88


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++||||||++| |+..+|..    .+.|+|..+++|+.+++.|++-||..|
T Consensus       213 ~~~LYLiMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~g  261 (550)
T KOG0605|consen  213 KEYLYLIMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQLG  261 (550)
T ss_pred             CCeeEEEEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHcC
Confidence            8999999999996 99999987    789999999999999999999999998

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-29  Score=228.73  Aligned_cols=190  Identities=29%  Similarity=0.403  Sum_probs=148.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCC-CCceeeeceeeeeCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLD-HPNIVALKHCFFSTTD  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~  149 (335)
                      ...+|.+++.||+|+||+|+.|.+..++..||+|++.+.         .+.+.+|+.+++.+. ||||+++++++     
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~-----   89 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF-----   89 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE-----
Confidence            345699999999999999999999999999999977543         234568999999998 99999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------cC---------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------VD---------  205 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------~~---------  205 (335)
                      .....+|+|||||.| +|++.+..    .+++.|.+++.+|+||+.||+|||++|              .+         
T Consensus        90 ~t~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DF  165 (370)
T KOG0583|consen   90 ATPTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDF  165 (370)
T ss_pred             ecCCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecc
Confidence            555559999999996 99999987    688999999999999999999999998              01         


Q ss_pred             --------hHHhHhhhcCCCCHHHhhhhC--CCCCCCCCCCCCCCccc-------------------------------c
Q 019844          206 --------QLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWH-------------------------------K  244 (335)
Q Consensus       206 --------~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------------------------------~  244 (335)
                              ......+.||+|.|.......  +.|..     ...+.|.                               .
T Consensus       166 G~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g-----~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~  240 (370)
T KOG0583|consen  166 GLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSG-----KAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF  240 (370)
T ss_pred             ccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCC-----chhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc
Confidence                    011122345555533322221  11221     1111121                               2


Q ss_pred             ccccCC-ChHHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          245 VFQKRL-PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       245 ~~~~~~-s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      .+|..+ |+++++||++||..||.+|+|+.++++||||+.
T Consensus       241 ~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  241 KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            345667 999999999999999999999999999999997

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-30  Score=200.52  Aligned_cols=192  Identities=30%  Similarity=0.547  Sum_probs=163.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|...++||+|+||+|++++.+.+++.||+|.++.+.      ....|||.+|+.++|.|||+++++.     ..+..+.
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence            4777899999999999999999999999999997432      4567999999999999999999998     4555588


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------------------  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------------  203 (335)
                      +|+|||+.+|..+....   ++.++...++.++.|+++||.|+|+++                                 
T Consensus        78 lvfe~cdqdlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip  154 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             EeHHHhhHHHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence            99999999999888763   678999999999999999999999987                                 


Q ss_pred             ------------------------------------------------------cChHHhHhhhcCCCCHHHhhhhC--C
Q 019844          204 ------------------------------------------------------VDQLVEIIKVLGTPTREEIKCMN--P  227 (335)
Q Consensus       204 ------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~--~  227 (335)
                                                                            .+++..++..+|+|..+.|..+.  |
T Consensus       155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp  234 (292)
T KOG0662|consen  155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP  234 (292)
T ss_pred             eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence                                                                  56788889999999988887763  6


Q ss_pred             CCCCCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          228 NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      .|..|.... ....|.... +.++..-+||++++|.-+|.+|++++++|+||||.+.
T Consensus       235 dyk~yp~yp-attswsqiv-p~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  235 DYKPYPIYP-ATTSWSQIV-PKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             CCcccCCcc-ccchHHHHh-hhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence            666543221 223565555 6788889999999999999999999999999999875

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=3.1e-30  Score=223.17  Aligned_cols=197  Identities=23%  Similarity=0.397  Sum_probs=149.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ....+|.+.+.||.|+||+||+|+++.++..||||.|.+.      .+.+..||.+|+.++|||||++++++     ...
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~   81 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDD   81 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecC
Confidence            3445699999999999999999999999999999999643      24467899999999999999999999     666


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------  203 (335)
                      .++|+|||||+| ||..+|..    +++++|..++.++.||+.||++||+++                            
T Consensus        82 ~~i~lVMEyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIA  157 (429)
T KOG0595|consen   82 DFIYLVMEYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIA  157 (429)
T ss_pred             CeEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEec
Confidence            679999999995 99999998    778999999999999999999999998                            


Q ss_pred             -------cChHHhHhhhcCCCCHHHhhhh-CCCCCCC---------------CCCCCC-------------CCccccccc
Q 019844          204 -------VDQLVEIIKVLGTPTREEIKCM-NPNYTEF---------------KFPQIK-------------PHPWHKVFQ  247 (335)
Q Consensus       204 -------~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~---------------~~~~~~-------------~~~~~~~~~  247 (335)
                             ........++||+|.|...+.+ ...|.+-               ..+.+.             .......++
T Consensus       158 DFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~  237 (429)
T KOG0595|consen  158 DFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP  237 (429)
T ss_pred             ccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh
Confidence                   0111112244555553222111 1111110               000000             111112334


Q ss_pred             cCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          248 KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ..+++...+|+...|+.||.+|.+..+-+.|+++..-
T Consensus       238 ~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  238 AELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             hhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence            5678888899999999999999999999999998754

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.97  E-value=1.5e-29  Score=216.48  Aligned_cols=207  Identities=29%  Similarity=0.583  Sum_probs=167.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCc-eeeeceeeeeCCC-CCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPN-IVALKHCFFSTTD-KEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpn-Iv~~~~~~~~~~~-~~~~  153 (335)
                      ..|..+++||+|+||+||+|+.+.+|+.||+|+|+-+.      ....||+.+|+.|+|+| ||.+++++.+.+. ....
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            34888899999999999999999999999999997432      34579999999999999 9999999965432 2334


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      .+++|+||++-||..++....+....++...++.+++||+.||+|||+++                              
T Consensus        91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~  170 (323)
T KOG0594|consen   91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAF  170 (323)
T ss_pred             eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHh
Confidence            68999999999999999986533246888999999999999999999998                              


Q ss_pred             --------------------------------------------------------cChHHhHhhhcCCCCHHHhhhh--
Q 019844          204 --------------------------------------------------------VDQLVEIIKVLGTPTREEIKCM--  225 (335)
Q Consensus       204 --------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~--  225 (335)
                                                                              .+++..++..+|||....|...  
T Consensus       171 ~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~  250 (323)
T KOG0594|consen  171 SIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSS  250 (323)
T ss_pred             cCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccc
Confidence                                                                    5677778888899887777654  


Q ss_pred             CCCCCCCCCCCCC-CCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCC
Q 019844          226 NPNYTEFKFPQIK-PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR  290 (335)
Q Consensus       226 ~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~  290 (335)
                      .|.|.. .++... ...+.... +..+++..+++.+||++||.+|.||..+|.||||.....+...
T Consensus       251 ~~~~k~-~f~~~~~~~~l~~~~-~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~~  314 (323)
T KOG0594|consen  251 LPDYKA-PFPKWPGPKDLSSIL-PKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSSQ  314 (323)
T ss_pred             cccccc-cCcCCCCccchHHhc-cccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchhh
Confidence            344543 233333 33444444 4566899999999999999999999999999999998665443

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=1.1e-28  Score=217.77  Aligned_cols=114  Identities=28%  Similarity=0.512  Sum_probs=100.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ++|.+.+.||.|+||.||+|.++.++..||+|++...     ...+.+|+.+++.++||||+++++++     ....++|
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeEE
Confidence            4699999999999999999999999999999998632     23466899999999999999999999     5566799


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++|+|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        80 lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~  123 (288)
T cd07871          80 LVFEYLDSDLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKRK  123 (288)
T ss_pred             EEEeCCCcCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999998888652   345899999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.6e-29  Score=218.56  Aligned_cols=204  Identities=23%  Similarity=0.373  Sum_probs=151.0

Q ss_pred             CccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           77 NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        77 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .....+.|++..+||.|.-++||+|+++.+++.||||++.-+     ...+.+|+..|+.++||||++++..|.     .
T Consensus        21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-----v   95 (516)
T KOG0582|consen   21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-----V   95 (516)
T ss_pred             CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-----e
Confidence            335556799999999999999999999999999999999632     356789999999999999999999994     4


Q ss_pred             ccEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------cChHH--------
Q 019844          152 ELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------VDQLV--------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------~~~~~--------  208 (335)
                      +..+|+||.||. |++.++++.+.  ...|.|..+..|+++++.||.|||.+|              .+...        
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs  173 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS  173 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee
Confidence            455999999999 59999999876  456999999999999999999999999              00000        


Q ss_pred             ------------hHhhhcCCCCHHHhhh--------------------------hCCCCCCCC-----CCCCCCCc----
Q 019844          209 ------------EIIKVLGTPTREEIKC--------------------------MNPNYTEFK-----FPQIKPHP----  241 (335)
Q Consensus       209 ------------~~~~~~g~~~~~~~~~--------------------------~~~~~~~~~-----~~~~~~~~----  241 (335)
                                  ....+.|+|.+.....                          +...|..|.     +..+...+    
T Consensus       174 a~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~  253 (516)
T KOG0582|consen  174 ASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL  253 (516)
T ss_pred             eeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc
Confidence                        0023456666322111                          111111110     00000000    


Q ss_pred             ---cccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          242 ---WHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       242 ---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                         ....-...++..++.+|..||+.||.+||||+++|+|+||+.....
T Consensus       254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~  302 (516)
T KOG0582|consen  254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSK  302 (516)
T ss_pred             cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccch
Confidence               0001113467789999999999999999999999999999887553

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.3e-29  Score=217.63  Aligned_cols=193  Identities=31%  Similarity=0.489  Sum_probs=145.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .+|..++.||+|+||.||++.+..+|..+|||.+...    .+.+.+|+.+|++|+|||||++++.......   ..++|
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~i   93 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYNI   93 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeEe
Confidence            4589999999999999999999999999999998755    4557899999999999999999997532221   36889


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHhHhhhc--------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVEIIKVL--------  214 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~~~~~~--------  214 (335)
                      +|||++| +|.+++..+.   +.++|..++.+.+||+.||.|||++|            ++.  ....+..+        
T Consensus        94 ~mEy~~~GsL~~~~~~~g---~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   94 FMEYAPGGSLSDLIKRYG---GKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eeeccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            9999995 9999999743   27999999999999999999999998            111  01111122        


Q ss_pred             ------------CCCCHHHhhhhCCCCCCC------------------CCCCCCCCccc------------------ccc
Q 019844          215 ------------GTPTREEIKCMNPNYTEF------------------KFPQIKPHPWH------------------KVF  246 (335)
Q Consensus       215 ------------g~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~------------------~~~  246 (335)
                                  ||+.     ++.|+....                  .+.. ...+|.                  +.+
T Consensus       171 ~~~~~~~~~~~~Gtp~-----~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T-g~~PW~~~~~~~~~~~~ig~~~~~P~i  244 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPN-----YMAPEVIRNGEVARRESDIWSLGCTVVEMLT-GKPPWSEFFEEAEALLLIGREDSLPEI  244 (313)
T ss_pred             ccccccccccccCCcc-----ccCchhhcCCCcCCccchhhhcCCEEEeccC-CCCcchhhcchHHHHHHHhccCCCCCC
Confidence                        3322     222221110                  0000 012222                  245


Q ss_pred             ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          247 QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |..+|+++++||.+||..||++||||.++|+|||.+....
T Consensus       245 p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  245 PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            6789999999999999999999999999999999987543

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=5.9e-29  Score=224.04  Aligned_cols=198  Identities=25%  Similarity=0.351  Sum_probs=150.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCC-CCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLD-HPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~  150 (335)
                      .....|.+.+.||+|.||.||+|+++.||+.+|+|.|.+..       ..+.+|+.+|+++. |||||+++++|     +
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e  106 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----E  106 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----E
Confidence            44557999999999999999999999999999999997532       36789999999998 99999999999     6


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------  203 (335)
                      ...++++|||+|.| .|++.+...     .++|..+..++.||+.|+.|||+.|                          
T Consensus       107 ~~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~  181 (382)
T KOG0032|consen  107 DPDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLI  181 (382)
T ss_pred             cCCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEe
Confidence            66679999999996 999888763     3999999999999999999999998                          


Q ss_pred             -------cChHHhHhhhcCCCCHHHhhhhC-CCCC--------------------CCCCCC-------CC--CCcccccc
Q 019844          204 -------VDQLVEIIKVLGTPTREEIKCMN-PNYT--------------------EFKFPQ-------IK--PHPWHKVF  246 (335)
Q Consensus       204 -------~~~~~~~~~~~g~~~~~~~~~~~-~~~~--------------------~~~~~~-------~~--~~~~~~~~  246 (335)
                             ..........+|+|.+....... ..|.                    +|.-..       +.  ...+....
T Consensus       182 DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~  261 (382)
T KOG0032|consen  182 DFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEP  261 (382)
T ss_pred             eCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCC
Confidence                   00011122345665533222111 1111                    110000       00  11223344


Q ss_pred             ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          247 QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |..++..+++||++||..||.+|+|+.++|+|||++....
T Consensus       262 w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~  301 (382)
T KOG0032|consen  262 WDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGE  301 (382)
T ss_pred             ccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCcc
Confidence            5788999999999999999999999999999999987633

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=2.7e-28  Score=220.05  Aligned_cols=117  Identities=32%  Similarity=0.538  Sum_probs=102.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.++||+|+||.||+|+++.+++.||||++...      ...+.+|+.+++.++||||+++++++..........+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            599999999999999999999999999999998632      23467899999999999999999998655444445689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||||+++|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        81 lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~  123 (338)
T cd07859          81 VVFELMESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTAN  123 (338)
T ss_pred             EEEecCCCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999988876    567999999999999999999999998

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=8.7e-30  Score=220.05  Aligned_cols=193  Identities=23%  Similarity=0.327  Sum_probs=148.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ....+|++.+.||+|+||+|.+|++...|+.||||.|+++.       -.+.|||+||..|+||||+++|++|     ++
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----EN  124 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----EN  124 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cC
Confidence            34458999999999999999999999999999999997643       3467999999999999999999999     77


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------------  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------  203 (335)
                      ...+.|||||..| .|++++.+    .+.++|.+++.+|+||+.|+.|+|.++                           
T Consensus       125 kdKIvivMEYaS~GeLYDYiSe----r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLS  200 (668)
T KOG0611|consen  125 KDKIVIVMEYASGGELYDYISE----RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLS  200 (668)
T ss_pred             CceEEEEEEecCCccHHHHHHH----hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchh
Confidence            7779999999995 99999998    788999999999999999999999988                           


Q ss_pred             --cChHHhHhhhcCCCCHHHhhhhC-CCCCCC-------------------CCC---------CCCCCccccccccCCCh
Q 019844          204 --VDQLVEIIKVLGTPTREEIKCMN-PNYTEF-------------------KFP---------QIKPHPWHKVFQKRLPP  252 (335)
Q Consensus       204 --~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~-------------------~~~---------~~~~~~~~~~~~~~~s~  252 (335)
                        ..+.....++||.|.|......+ ..|...                   .|.         ++...   ..+.+.-+.
T Consensus       201 Nly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G---aYrEP~~PS  277 (668)
T KOG0611|consen  201 NLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG---AYREPETPS  277 (668)
T ss_pred             hhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc---cccCCCCCc
Confidence              01111223556666543222110 111110                   000         00111   112245677


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      ++.-||+.||..||++|.|+.++-.|=|+.-
T Consensus       278 dA~gLIRwmLmVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  278 DASGLIRWMLMVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             hHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence            8999999999999999999999999988753

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-28  Score=216.57  Aligned_cols=201  Identities=26%  Similarity=0.364  Sum_probs=146.5

Q ss_pred             CCccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------------hhHHHHHHHHHhCCCCce
Q 019844           76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------------RYKNRELQIMQMLDHPNI  137 (335)
Q Consensus        76 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------------~~~~~Ei~~l~~l~hpnI  137 (335)
                      ......+.|++++.||+|.||+|.+|++..+++.||||++.+..                  +.+.+||.||++|+||||
T Consensus        91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV  170 (576)
T KOG0585|consen   91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV  170 (576)
T ss_pred             ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence            34456678999999999999999999999999999999996421                  357799999999999999


Q ss_pred             eeeceeeeeCCCCCccEEEEEeecch-hhHHHHHHHHhhhcCC-CCHHHHHHHHHHHHHHHHHHHhCC------------
Q 019844          138 VALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQR-MPLIYVKLYTYQICRALAYIHNCI------------  203 (335)
Q Consensus       138 v~~~~~~~~~~~~~~~~~~iv~e~~~-g~L~~~l~~~~~~~~~-l~~~~~~~i~~qi~~aL~yLH~~~------------  203 (335)
                      |+|+++.   ++....++|||+|||. |.+... .    ..+. +++.+++.|++.++.||+|||.+|            
T Consensus       171 V~LiEvL---DDP~s~~~YlVley~s~G~v~w~-p----~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLL  242 (576)
T KOG0585|consen  171 VKLIEVL---DDPESDKLYLVLEYCSKGEVKWC-P----PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLL  242 (576)
T ss_pred             eEEEEee---cCcccCceEEEEEeccCCccccC-C----CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheE
Confidence            9999998   4456677999999999 444211 1    1344 999999999999999999999998            


Q ss_pred             -----------------------cChHHhHhhhcCCCCH---HHhhhhC-CCCCCC-----------------CCC----
Q 019844          204 -----------------------VDQLVEIIKVLGTPTR---EEIKCMN-PNYTEF-----------------KFP----  235 (335)
Q Consensus       204 -----------------------~~~~~~~~~~~g~~~~---~~~~~~~-~~~~~~-----------------~~~----  235 (335)
                                             .+.........|||..   +....+. ..|..+                 ..|    
T Consensus       243 l~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~  322 (576)
T KOG0585|consen  243 LSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD  322 (576)
T ss_pred             EcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc
Confidence                                   0112222335677762   2222111 011100                 011    


Q ss_pred             -------CCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          236 -------QIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       236 -------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                             .+...++.....+.+.++++|||.+||++||.+|++..++..|||....
T Consensus       323 ~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  323 FELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence                   1111222222224578999999999999999999999999999999776

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=6.9e-28  Score=214.18  Aligned_cols=115  Identities=30%  Similarity=0.442  Sum_probs=101.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|++.+.||+|+||.||+|+++.+++.||||++....     ....+|+.+++.++||||+++++++     ....++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~   78 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETL   78 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeE
Confidence            356999999999999999999999999999999986422     3467899999999999999999999     555679


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.++|.+++...   .+.+++..++.++.||+.||+|||+++
T Consensus        79 ~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~  123 (303)
T cd07869          79 TLVFEYVHTDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQRY  123 (303)
T ss_pred             EEEEECCCcCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999988887652   356899999999999999999999988

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.3e-29  Score=204.89  Aligned_cols=198  Identities=23%  Similarity=0.311  Sum_probs=149.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|.+++.||+|-||.||+|+.+.++-.||+|++.++       ..++.||++|...|+||||.++|++|     .+.
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~   94 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDS   94 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----ecc
Confidence            345799999999999999999999999999999999654       25678999999999999999999999     555


Q ss_pred             cEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---------------------------
Q 019844          153 LYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV---------------------------  204 (335)
Q Consensus       153 ~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~---------------------------  204 (335)
                      ..+|+++||.. |.|+..|....  ..++++..++.|++|++.||.|+|.+++                           
T Consensus        95 ~riyLilEya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV  172 (281)
T KOG0580|consen   95 KRIYLILEYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSV  172 (281)
T ss_pred             ceeEEEEEecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCcee
Confidence            55999999999 69999988533  6779999999999999999999999980                           


Q ss_pred             -ChHHhHhhhcCCCCHHHhhhhCCC-CCC---------------CCCCCCCCC----------ccccccccCCChHHHHH
Q 019844          205 -DQLVEIIKVLGTPTREEIKCMNPN-YTE---------------FKFPQIKPH----------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       205 -~~~~~~~~~~g~~~~~~~~~~~~~-~~~---------------~~~~~~~~~----------~~~~~~~~~~s~~~~~l  257 (335)
                       .....-.++|||..+....-..+. +..               ...+.+...          .....+|..++..+.||
T Consensus       173 ~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dl  252 (281)
T KOG0580|consen  173 HAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADL  252 (281)
T ss_pred             ecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHH
Confidence             001122234555442222111000 000               001111100          11123568899999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      |.+||..+|.+|++..|++.|||+...
T Consensus       253 I~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  253 ISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             HHHHhccCccccccHHHHhhhHHHHhc
Confidence            999999999999999999999998754

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=6.8e-29  Score=227.36  Aligned_cols=198  Identities=24%  Similarity=0.334  Sum_probs=152.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      ...++|.++++||+|+||+|+++..+.+++.||||+++|+.       ...+.|..|+... +||.+++++.+|     +
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f-----Q  439 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF-----Q  439 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----c
Confidence            44568999999999999999999999999999999998643       5567898988888 599999999999     8


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------  203 (335)
                      ...++|+||||+.| |+..+..     .+.|+|..++.|+.+|+.||+|||++|                          
T Consensus       440 T~~~l~fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGl  514 (694)
T KOG0694|consen  440 TKEHLFFVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGL  514 (694)
T ss_pred             cCCeEEEEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEeccccc
Confidence            88889999999997 7443333     477999999999999999999999999                          


Q ss_pred             ----cChHHhHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCC-CCC------ccccccccCCChH
Q 019844          204 ----VDQLVEIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQI-KPH------PWHKVFQKRLPPE  253 (335)
Q Consensus       204 ----~~~~~~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~-~~~------~~~~~~~~~~s~~  253 (335)
                          ........++||||.+....... ..|..                  ..|+.- ...      .-...+|..+|.+
T Consensus       515 cKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~e  594 (694)
T KOG0694|consen  515 CKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKE  594 (694)
T ss_pred             ccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHH
Confidence                11223445678887743222111 11110                  011100 000      0123467789999


Q ss_pred             HHHHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          254 AVDLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +.++|+++|..||++|..     +.+|..||||+.+.|
T Consensus       595 a~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w  632 (694)
T KOG0694|consen  595 AIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW  632 (694)
T ss_pred             HHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence            999999999999999996     589999999999876

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-30  Score=214.79  Aligned_cols=192  Identities=28%  Similarity=0.426  Sum_probs=150.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      -|.++.+||+|+||.||+|.++.+|..+|||.++.+  .+.+.+||.||.+++.|+||+||+.|+...+     +|||||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sD-----LWIVME  108 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSD-----LWIVME  108 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCc-----eEeehh
Confidence            388999999999999999999999999999999754  4778899999999999999999999976555     999999


Q ss_pred             cch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------cChHHh
Q 019844          161 YVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------VDQLVE  209 (335)
Q Consensus       161 ~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------~~~~~~  209 (335)
                      ||+ |++.++++..   +++++|.++..+++..+.||+|||...                              .+...+
T Consensus       109 YCGAGSiSDI~R~R---~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  109 YCGAGSISDIMRAR---RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             hcCCCcHHHHHHHh---cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence            999 7999999863   678999999999999999999999765                              233344


Q ss_pred             HhhhcCCCCH---HHhh---------------------hhCCCCCC-------CCCCCCCCCccccccccCCChHHHHHH
Q 019844          210 IIKVLGTPTR---EEIK---------------------CMNPNYTE-------FKFPQIKPHPWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       210 ~~~~~g~~~~---~~~~---------------------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~s~~~~~li  258 (335)
                      -.++.|||.+   +.+.                     .+.|.|..       |-.|...+..|.  -|..+|.++.|||
T Consensus       186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~--KPE~WS~~F~DFi  263 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFK--KPEEWSSEFNDFI  263 (502)
T ss_pred             hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCC--ChHhhhhHHHHHH
Confidence            4456777762   2221                     12233321       111111111111  1345789999999


Q ss_pred             HHhccCCCCCCCCHHHHhcCcccccC
Q 019844          259 CRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       259 ~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ++||..+|++|-||.++++|||++..
T Consensus       264 ~~CLiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  264 RSCLIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             HHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence            99999999999999999999999864

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-29  Score=225.91  Aligned_cols=194  Identities=24%  Similarity=0.336  Sum_probs=146.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...|....+||+|+-|.||.|+...+++.||||.+...    .+.+..|+.+|+..+|+|||.+++.|+..     ..+|
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deLW  346 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DELW  346 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----ceeE
Confidence            34688899999999999999999999999999999643    34577999999999999999999999654     4499


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------------------------C
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------------------------D  205 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------------------------~  205 (335)
                      +|||||+| +|.+++..     -.++|.++..|+++++.||+|||.+++                              .
T Consensus       347 VVMEym~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~  421 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE  421 (550)
T ss_pred             EEEeecCCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence            99999996 99999985     449999999999999999999999980                              0


Q ss_pred             hHHhHhhhcCCCCHHHhhhhCC-CCCC----------------CCCCCCCCCccc------------cccccCCChHHHH
Q 019844          206 QLVEIIKVLGTPTREEIKCMNP-NYTE----------------FKFPQIKPHPWH------------KVFQKRLPPEAVD  256 (335)
Q Consensus       206 ~~~~~~~~~g~~~~~~~~~~~~-~~~~----------------~~~~~~~~~~~~------------~~~~~~~s~~~~~  256 (335)
                      ...+-.+.+|||++...+.... .|..                -+-|.+...++.            ...+..+|+.++|
T Consensus       422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kd  501 (550)
T KOG0578|consen  422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKD  501 (550)
T ss_pred             ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHH
Confidence            0112234567777332221110 0100                000111111111            1234679999999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ||.+||+.|+.+|++|.+||+||||+..
T Consensus       502 FL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  502 FLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             HHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999644

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.96  E-value=4.8e-28  Score=221.31  Aligned_cols=195  Identities=31%  Similarity=0.460  Sum_probs=157.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchh---HHHHHHHHHhCC-C-----CceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY---KNRELQIMQMLD-H-----PNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~---~~~Ei~~l~~l~-h-----pnIv~~~~~~~~~~~~~~~  153 (335)
                      +|.+.+.||+|+||.|-+|.+..|++.||||+|++...+   ...|+.+|..|+ |     -|||+++++|     .-.+
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr~  261 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFRN  261 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----cccc
Confidence            899999999999999999999999999999999876644   457999999996 4     4899999999     7777


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      |+|||+|+++-+|+++++.+.  ..+|+...++.|+.||+.||.+||..+                              
T Consensus       262 HlciVfELL~~NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  262 HLCIVFELLSTNLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC  339 (586)
T ss_pred             ceeeeehhhhhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence            899999999999999999866  566999999999999999999999988                              


Q ss_pred             ------------------------------------------------------cChHHhHhhhcCCCCHHHhhhhCCCC
Q 019844          204 ------------------------------------------------------VDQLVEIIKVLGTPTREEIKCMNPNY  229 (335)
Q Consensus       204 ------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~  229 (335)
                                                                            .+++..|+.++|.|+...+..+.-.+
T Consensus       340 ~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~  419 (586)
T KOG0667|consen  340 FESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAH  419 (586)
T ss_pred             ccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccc
Confidence                                                                  67888889999988877665332111


Q ss_pred             CCC----CCCC-----------------------------C-CCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHH
Q 019844          230 TEF----KFPQ-----------------------------I-KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEA  275 (335)
Q Consensus       230 ~~~----~~~~-----------------------------~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~  275 (335)
                      .-+    .++.                             . ....+...+.......+.|||.+||.+||.+|+|+.++
T Consensus       420 kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qa  499 (586)
T KOG0667|consen  420 KFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQA  499 (586)
T ss_pred             eehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHH
Confidence            000    0000                             0 11122222322345678999999999999999999999


Q ss_pred             hcCcccccC
Q 019844          276 CVHPFFDEL  284 (335)
Q Consensus       276 L~hp~f~~~  284 (335)
                      |+||||...
T Consensus       500 l~Hpfl~~~  508 (586)
T KOG0667|consen  500 LNHPFLTGT  508 (586)
T ss_pred             hcCcccccc
Confidence            999999854

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=1.5e-27  Score=215.14  Aligned_cols=235  Identities=26%  Similarity=0.382  Sum_probs=165.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..+|.+.+.||+|+||+||+|.+..+++.||||.+...      ...+.+|+.+++.++||||+++++++.........+
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            34699999999999999999999999999999998642      234568999999999999999999885443333356


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--hHHhHh---------
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--QLVEII---------  211 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--~~~~~~---------  211 (335)
                      +|+||||+.++|.+++..    .+.+++..++.++.||+.||.|||++++            +  ....+.         
T Consensus        84 ~~lv~e~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  159 (337)
T cd07858          84 VYIVYELMDTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS  159 (337)
T ss_pred             EEEEEeCCCCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence            899999999999888875    5679999999999999999999999880            0  000000         


Q ss_pred             -------hhcCCCC---HHHhhhhC-C------------------CCCCCCCCC--------------------------
Q 019844          212 -------KVLGTPT---REEIKCMN-P------------------NYTEFKFPQ--------------------------  236 (335)
Q Consensus       212 -------~~~g~~~---~~~~~~~~-~------------------~~~~~~~~~--------------------------  236 (335)
                             ...|+..   ++.+.... .                  ....+....                          
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T cd07858         160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE  239 (337)
T ss_pred             CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence                   0011111   11111000 0                  000000000                          


Q ss_pred             -----------CCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCc
Q 019844          237 -----------IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKP  305 (335)
Q Consensus       237 -----------~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~  305 (335)
                                 .....+.. ..+.+++++.+||++||+.||++|||+.++|+||||..+..+......  ..  .++|+ 
T Consensus       240 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~--~~--~~~~~-  313 (337)
T cd07858         240 KARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVC--QT--PFSFD-  313 (337)
T ss_pred             hhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccC--CC--ccchh-
Confidence                       00000011 124688999999999999999999999999999999998887764432  22  33444 


Q ss_pred             ccCCCCCHHHHhhcChHHHh
Q 019844          306 PELSGIPPETINRLIPEHAR  325 (335)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~  325 (335)
                      .+...+..+.++++|..|+.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~  333 (337)
T cd07858         314 FEEDALTEEDIKELIYNEML  333 (337)
T ss_pred             hhhhhcCHHHHHHHHHHHHh
Confidence            44666889999999988875

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=2e-27  Score=211.76  Aligned_cols=114  Identities=30%  Similarity=0.518  Sum_probs=99.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ++|.+.+.||+|+||.||+|+++.+++.||+|++....     ..+.+|+.+++.++||||+++++++     ....++|
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV-----HTDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEE-----eeCCeEE
Confidence            46999999999999999999999999999999986322     3466899999999999999999999     4555689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++++|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        81 lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (309)
T cd07872          81 LVFEYLDKDLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRRK  124 (309)
T ss_pred             EEEeCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999888877652   345899999999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=7.7e-28  Score=216.31  Aligned_cols=197  Identities=27%  Similarity=0.343  Sum_probs=143.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|.+.+.||+|+||.||+|+++.+++.||||++.+.       ...+.+|+.+++.++||||+++++++     ....
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~   91 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDEN   91 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCC
Confidence            45699999999999999999999999999999998642       23467899999999999999999999     5566


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHh--------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEII--------  211 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~--------  211 (335)
                      ++|+||||+.| +|.+++..    .+.+++..++.++.||+.||+|||++++            +. ....+        
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  167 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKK  167 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceE
Confidence            79999999986 99988876    5679999999999999999999999980            00 00000        


Q ss_pred             ------hhcCCCC---HHHhhhhCCCC--CCC------------CCCCCCCCcc---------ccccccCCChHHHHHHH
Q 019844          212 ------KVLGTPT---REEIKCMNPNY--TEF------------KFPQIKPHPW---------HKVFQKRLPPEAVDLVC  259 (335)
Q Consensus       212 ------~~~g~~~---~~~~~~~~~~~--~~~------------~~~~~~~~~~---------~~~~~~~~s~~~~~li~  259 (335)
                            ..+|++.   ++.+.......  .-|            ..+.....+.         ...++..+++.+++||.
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~  247 (329)
T PTZ00263        168 VPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVK  247 (329)
T ss_pred             cCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHH
Confidence                  1123332   22111110000  000            0000000000         11234568899999999


Q ss_pred             HhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          260 RFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       260 ~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +||+.||.+|++     +.++++||||....+
T Consensus       248 ~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~  279 (329)
T PTZ00263        248 GLLQTDHTKRLGTLKGGVADVKNHPYFHGANW  279 (329)
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCCccCCCCH
Confidence            999999999997     799999999987543

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.95  E-value=2.1e-29  Score=207.39  Aligned_cols=195  Identities=23%  Similarity=0.398  Sum_probs=154.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .|.-.+.||+|..++|..|.++.+|+.+|+|+|....            +...+|+.||+++ .||+|+.+.++|     
T Consensus        18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y-----   92 (411)
T KOG0599|consen   18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY-----   92 (411)
T ss_pred             hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec-----
Confidence            4888899999999999999999999999999995211            2345899999999 799999999999     


Q ss_pred             CCccEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------
Q 019844          150 KEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------------------  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------------------  203 (335)
                      +...++++|+|+|+ |.|++++.+    .-.++|..++.|++|++.|++|||.++                         
T Consensus        93 es~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence            77888999999999 799999997    678999999999999999999999888                         


Q ss_pred             ----cChHHhHhhhcCCCCHH---Hhhh----hCCCCCC-----------CC------------------CCCCCCCccc
Q 019844          204 ----VDQLVEIIKVLGTPTRE---EIKC----MNPNYTE-----------FK------------------FPQIKPHPWH  243 (335)
Q Consensus       204 ----~~~~~~~~~~~g~~~~~---~~~~----~~~~~~~-----------~~------------------~~~~~~~~~~  243 (335)
                          +....+...+||||.+.   .+.|    ..|+|..           |.                  +.......+.
T Consensus       169 Fa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~  248 (411)
T KOG0599|consen  169 FACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFR  248 (411)
T ss_pred             eeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccC
Confidence                23334555678888743   3332    2344431           00                  0000111233


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ..-|.++|.+++|||.+||+.||.+|+|++++|.||||.++-.
T Consensus       249 speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~  291 (411)
T KOG0599|consen  249 SPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ  291 (411)
T ss_pred             CcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence            4456789999999999999999999999999999999976543

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=4.9e-27  Score=211.75  Aligned_cols=234  Identities=26%  Similarity=0.435  Sum_probs=164.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|.+.+.||+|+||.||+|.+..+|+.||||++...     ...+.+|+.+++.++||||+++++++.........++
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            45799999999999999999999999999999998532     2346689999999999999999998754433444568


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-Ch-------------HHhH-----------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-DQ-------------LVEI-----------  210 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-~~-------------~~~~-----------  210 (335)
                      |+||||++++|.+++.     ...+++..++.++.||+.||.|||++++ +.             ...+           
T Consensus        84 ~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~  158 (336)
T cd07849          84 YIVQELMETDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADP  158 (336)
T ss_pred             EEEehhcccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence            9999999998888775     3569999999999999999999999980 00             0000           


Q ss_pred             --------hhhcCCCC---HHHhhh----------------------hCCCCCCCCC-------------C---------
Q 019844          211 --------IKVLGTPT---REEIKC----------------------MNPNYTEFKF-------------P---------  235 (335)
Q Consensus       211 --------~~~~g~~~---~~~~~~----------------------~~~~~~~~~~-------------~---------  235 (335)
                              ....|++.   ++.+..                      +.+.|.....             +         
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (336)
T cd07849         159 EHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCII  238 (336)
T ss_pred             cccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhh
Confidence                    00011111   111100                      0011100000             0         


Q ss_pred             ------------CCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCC
Q 019844          236 ------------QIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNF  303 (335)
Q Consensus       236 ------------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~  303 (335)
                                  .....++.... +..++++.+||.+||+.||++|||+.++++||||..+..+......  +-+..++|
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~--~~~~~~~~  315 (336)
T cd07849         239 SLRARNYIKSLPFKPKVPWNKLF-PNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVA--EEPFPFDF  315 (336)
T ss_pred             chhhhhHHhhcCcCCcccHHHHh-cccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccC--CCCCChhh
Confidence                        00000011111 3568889999999999999999999999999999999876543322  22345666


Q ss_pred             CcccCCCCCHHHHhhcChHHH
Q 019844          304 KPPELSGIPPETINRLIPEHA  324 (335)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~  324 (335)
                      +  .++.++.+.+++.|.+++
T Consensus       316 ~--~~~~~~~~~~~~~~~~~~  334 (336)
T cd07849         316 E--LFDDLPKEKLKELIFEEI  334 (336)
T ss_pred             c--cccccCHHHHHHHHHHHh
Confidence            6  668888888888888775

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=4.8e-30  Score=211.95  Aligned_cols=196  Identities=22%  Similarity=0.401  Sum_probs=145.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEec------ccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL------QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~------~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..+|+++++||+|+||.||++.+..+|+.+|.|.|.      +..+.+..|+.+|++|+|||||++|++-+.   ++..-
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~~ev   94 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---EDNEV   94 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---ccchh
Confidence            345999999999999999999999999999999985      234567899999999999999999994432   33334


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC--C----------------------------
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC--I----------------------------  203 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~--~----------------------------  203 (335)
                      ++||||||+ |||.++++.+.+.++.++|..+|.++.|+|.||..+|++  +                            
T Consensus        95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL  174 (375)
T KOG0591|consen   95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGL  174 (375)
T ss_pred             hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchh
Confidence            889999999 699999999988889999999999999999999999982  2                            


Q ss_pred             ----cChHHhHhhhcCCCCHHHhhhh-CCCCCC-----------------------CCCC----CCCCCccccccc-cCC
Q 019844          204 ----VDQLVEIIKVLGTPTREEIKCM-NPNYTE-----------------------FKFP----QIKPHPWHKVFQ-KRL  250 (335)
Q Consensus       204 ----~~~~~~~~~~~g~~~~~~~~~~-~~~~~~-----------------------~~~~----~~~~~~~~~~~~-~~~  250 (335)
                          ........+.+|||.+...... ...|..                       -.+.    ++....+.. +| ..+
T Consensus       175 ~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~-~p~~~Y  253 (375)
T KOG0591|consen  175 GRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP-LPDEHY  253 (375)
T ss_pred             HhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC-CcHHHh
Confidence                1111122356788885433221 111211                       0000    011112211 22 567


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      |.++..||..|+..||+.||+.     +|++.++.
T Consensus       254 S~~l~~li~~ci~vd~~~RP~t-----~~~v~di~  283 (375)
T KOG0591|consen  254 STDLRELINMCIAVDPEQRPDT-----VPYVQDIQ  283 (375)
T ss_pred             hhHHHHHHHHHccCCcccCCCc-----chHHHHHH
Confidence            8999999999999999999987     56665543

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-29  Score=220.64  Aligned_cols=195  Identities=22%  Similarity=0.347  Sum_probs=147.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...|..++.||+|+||.||+|.+..+++.||+|+|..+     ...+++|+.+|.+++++||.++|+.|+...     .+
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~L   86 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----KL   86 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----cH
Confidence            34588899999999999999999999999999999743     355789999999999999999999995544     49


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------c
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------V  204 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------~  204 (335)
                      ||+||||.| ++.++++.    ...+.|.++..++++++.||.|||..+                              .
T Consensus        87 wiiMey~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~  162 (467)
T KOG0201|consen   87 WIIMEYCGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLT  162 (467)
T ss_pred             HHHHHHhcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeee
Confidence            999999996 99999986    555699999999999999999999988                              1


Q ss_pred             ChHHhHhhhcCCCCHHHhhhhC-CCCCCC----------------CCCCCCCCc----------cccccccCCChHHHHH
Q 019844          205 DQLVEIIKVLGTPTREEIKCMN-PNYTEF----------------KFPQIKPHP----------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       205 ~~~~~~~~~~g~~~~~~~~~~~-~~~~~~----------------~~~~~~~~~----------~~~~~~~~~s~~~~~l  257 (335)
                      .......+++|||.+....... ..|..-                .-|.....+          ..+.+...+|+.+++|
T Consensus       163 ~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEF  242 (467)
T KOG0201|consen  163 NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEF  242 (467)
T ss_pred             chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHH
Confidence            1112225667888732222111 112110                000001111          1122334789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      |..||.+||+.||+|.++|+|+|++..
T Consensus       243 V~~CL~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  243 VEACLDKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             HHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence            999999999999999999999998763

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.4e-28  Score=214.21  Aligned_cols=195  Identities=24%  Similarity=0.303  Sum_probs=142.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|.++.+++.||+|++...       ...+.+|+.+++.++||||+++++++     .+..++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~   76 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRFL   76 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCeE
Confidence            599999999999999999999999999999998632       23467899999999999999999998     566779


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHh----------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEII----------  211 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~----------  211 (335)
                      |+||||++| +|.+++..    .+.+++..++.++.||+.||+|||++++            +. ....+          
T Consensus        77 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~  152 (291)
T cd05612          77 YMLMEYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR  152 (291)
T ss_pred             EEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence            999999995 99999876    5679999999999999999999999980            00 00000          


Q ss_pred             ----hhcCCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-------ccccccccCCChHHHHHHHHh
Q 019844          212 ----KVLGTPT---REEIKCMNPNYT----------------EFKFPQIKPH-------PWHKVFQKRLPPEAVDLVCRF  261 (335)
Q Consensus       212 ----~~~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~s~~~~~li~~~  261 (335)
                          ..+|++.   ++.+........                ...+......       .....++..+++.+++||++|
T Consensus       153 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~  232 (291)
T cd05612         153 DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKL  232 (291)
T ss_pred             CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHH
Confidence                1123322   111110000000                0000000000       001124456789999999999


Q ss_pred             ccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          262 FQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       262 L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      |+.||.+|++     +.++++||||....+
T Consensus       233 l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  262 (291)
T cd05612         233 LVVDRTRRLGNMKNGADDVKNHRWFKSVDW  262 (291)
T ss_pred             cCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence            9999999995     999999999987655

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=6.8e-27  Score=207.60  Aligned_cols=115  Identities=27%  Similarity=0.490  Sum_probs=101.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|.+.+.||.|+||.||+|.++.+++.||+|.+....     ..+.+|+.+++.++||||+++++++     ....++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~   79 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSL   79 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeE
Confidence            356999999999999999999999999999999986322     3466899999999999999999999     555679


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++++|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        80 ~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~  124 (301)
T cd07873          80 TLVFEYLDKDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRRK  124 (301)
T ss_pred             EEEEeccccCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999998887652   346899999999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.95  E-value=6.1e-27  Score=206.38  Aligned_cols=113  Identities=35%  Similarity=0.551  Sum_probs=97.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||+|+++.+++.||+|++...      ...+.+|+.+++.++||||+++++++     ....++|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~   76 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKLY   76 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEEE
Confidence            599999999999999999999999999999998642      23467899999999999999999999     5566799


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++++.+.+...   ...+++..++.++.||+.||.|||+.+
T Consensus        77 lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~  120 (287)
T cd07848          77 LVFEYVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHKND  120 (287)
T ss_pred             EEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999998554444331   456999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=2.6e-27  Score=212.35  Aligned_cols=190  Identities=26%  Similarity=0.367  Sum_probs=137.0

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||+|+++.+|+.||||++.+..       ..+.+|+.+++.++||||+++++++     ....++|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence            46999999999999999999999999996431       3456899999999999999999999     56667999999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh--------------
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK--------------  212 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~--------------  212 (335)
                      |+.| +|.+++..    .+.+++..++.++.||+.||+|||++|+            +. ....+.              
T Consensus        76 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~  151 (323)
T cd05571          76 YANGGELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT  151 (323)
T ss_pred             CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc
Confidence            9996 99888875    5679999999999999999999999980            00 000011              


Q ss_pred             ---hcCCCC---HHHhhhhCCCC--CCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhcc
Q 019844          213 ---VLGTPT---REEIKCMNPNY--TEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFFQ  263 (335)
Q Consensus       213 ---~~g~~~---~~~~~~~~~~~--~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L~  263 (335)
                         .+|++.   ++.+.......  .-|.+.-      ....+|               ...++..+++++.+||.+||+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  231 (323)
T cd05571         152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLK  231 (323)
T ss_pred             ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcc
Confidence               122322   11111000000  0000000      000011               112456789999999999999


Q ss_pred             CCCCCCC-----CHHHHhcCcccccCCC
Q 019844          264 YSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       264 ~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .||++||     ++.++++||||....+
T Consensus       232 ~dP~~R~~~~~~~~~~ll~h~~f~~~~~  259 (323)
T cd05571         232 KDPKQRLGGGPEDAKEIMEHRFFASINW  259 (323)
T ss_pred             CCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            9999999     8999999999988644

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=4.5e-27  Score=214.88  Aligned_cols=117  Identities=25%  Similarity=0.359  Sum_probs=100.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+++.||+|+||.||+|.+..+++.||||.+...      .+.+.+|+.+++.++||||+++++++.........++|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            378899999999999999999999999999998642      24567899999999999999999998543322223689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        81 lv~e~~~~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~  123 (372)
T cd07853          81 VVTELMQSDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAG  123 (372)
T ss_pred             EEeeccccCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999988887765    567999999999999999999999998

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.95  E-value=4.7e-28  Score=202.80  Aligned_cols=202  Identities=31%  Similarity=0.492  Sum_probs=156.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc----EEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..|++++.||+|+||.||+|..+.++.    .||||.++.+.      ....||+.+++.|+|||||.+..+|...    
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~----   99 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH----   99 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc----
Confidence            459999999999999999997665533    79999997542      3467999999999999999999999742    


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRI-HQRMPLIYVKLYTYQICRALAYIHNCI---------------------------  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------  203 (335)
                      +..+++++||.+.||..+++..... ...++...++.|++||+.|+.|||++-                           
T Consensus       100 d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD  179 (438)
T KOG0666|consen  100 DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD  179 (438)
T ss_pred             CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence            4559999999999999999865432 346899999999999999999999864                           


Q ss_pred             ---------------------------------------------------------------------------cChHH
Q 019844          204 ---------------------------------------------------------------------------VDQLV  208 (335)
Q Consensus       204 ---------------------------------------------------------------------------~~~~~  208 (335)
                                                                                                 .+++.
T Consensus       180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~  259 (438)
T KOG0666|consen  180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD  259 (438)
T ss_pred             ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence                                                                                       67788


Q ss_pred             hHhhhcCCCCHHHhhhh--CCCCCC----CCCCCCCCCcccccc--ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcc
Q 019844          209 EIIKVLGTPTREEIKCM--NPNYTE----FKFPQIKPHPWHKVF--QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPF  280 (335)
Q Consensus       209 ~~~~~~g~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~  280 (335)
                      .|+.++|+|....|..+  -|.|..    +.........+...+  ...-++.+.+|+.+||++||.+|+|++++|+|+|
T Consensus       260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y  339 (438)
T KOG0666|consen  260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY  339 (438)
T ss_pred             HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence            88899999987777655  233311    000001111111111  1234566999999999999999999999999999


Q ss_pred             cccCCCC
Q 019844          281 FDELRDP  287 (335)
Q Consensus       281 f~~~~~~  287 (335)
                      |.....|
T Consensus       340 F~~d~lp  346 (438)
T KOG0666|consen  340 FTEDPLP  346 (438)
T ss_pred             cccCCCC
Confidence            9987655

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.95  E-value=3.6e-26  Score=208.37  Aligned_cols=119  Identities=22%  Similarity=0.292  Sum_probs=100.1

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~  151 (335)
                      ...++|.+.+.||+|+||.||+|.+..+++.||||++...      ...+.+|+.+++.++||||+++++++..... ..
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            3456799999999999999999999999999999998642      2356789999999999999999998854321 23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|+||||++++|.+.+..      .+++..++.++.||+.||.|||+++
T Consensus       101 ~~~~~lv~e~~~~~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~  146 (364)
T cd07875         101 FQDVYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG  146 (364)
T ss_pred             cCeEEEEEeCCCCCHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            345899999999988777642      3889999999999999999999988

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.4e-26  Score=210.37  Aligned_cols=112  Identities=20%  Similarity=0.250  Sum_probs=98.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeec
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      .+|.+++.||+|+||.||+|.+..+++.||+|+..+.  ....|+.+++.++||||+++++++     ....+.|+|||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~  138 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--TTLIEAMLLQNVNHPSVIRMKDTL-----VSGAITCMVLPH  138 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--ccHHHHHHHHhCCCCCCcChhheE-----EeCCeeEEEEEc
Confidence            4699999999999999999999999999999976432  346799999999999999999999     445568899999


Q ss_pred             chhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          162 VPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       162 ~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.|+|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus       139 ~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (357)
T PHA03209        139 YSSDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQR  177 (357)
T ss_pred             cCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999998888652   456999999999999999999999998

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.95  E-value=2.1e-26  Score=202.95  Aligned_cols=119  Identities=27%  Similarity=0.423  Sum_probs=100.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhC---CCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQML---DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|++.+.||+|+||.||+|.++.+++.||+|.+....      ....+|+.+++.+   +||||+++++++.........
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            4899999999999999999999999999999986421      2456788887766   799999999998654444556


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++||||+.++|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        81 ~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (288)
T cd07863          81 KVTLVFEHVDQDLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHANC  128 (288)
T ss_pred             eEEEEEcccccCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            789999999999988887532  345899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=1.6e-26  Score=204.07  Aligned_cols=119  Identities=27%  Similarity=0.435  Sum_probs=97.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcC-CCcEEEEEEecccc------hhHHHHHHHHHhC---CCCceeeeceeeeeCCCCCc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRE-TGEIVAIKKVLQDK------RYKNRELQIMQML---DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~------~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +|++.+.||+|+||.||+|++.. +++.||+|.+....      ....+|+.+++.+   +||||+++++++........
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            59999999999999999999864 46889999886321      2456788887776   69999999999854333345


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++||||++++|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        82 ~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~  130 (290)
T cd07862          82 TKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR  130 (290)
T ss_pred             CcEEEEEccCCCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5689999999999999887533  345899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=7.7e-27  Score=214.11  Aligned_cols=112  Identities=21%  Similarity=0.290  Sum_probs=100.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      ..+|.+++.||+|+||.||+|.+..+++.||+|....  ..+.+|+.+|+.|+|||||+++++|     ....+.|+|||
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~lv~e  163 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--GGTATEAHILRAINHPSIIQLKGTF-----TYNKFTCLILP  163 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--hhhHHHHHHHHhCCCCCCCCEeEEE-----EECCeeEEEEe
Confidence            3569999999999999999999999999999997643  4567999999999999999999999     45556899999


Q ss_pred             cchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++.++|..++..    ...+++..++.|+.||+.||.|||+++
T Consensus       164 ~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~  202 (391)
T PHA03212        164 RYKTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENR  202 (391)
T ss_pred             cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999888875    567999999999999999999999998

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=1.2e-26  Score=204.41  Aligned_cols=196  Identities=20%  Similarity=0.269  Sum_probs=139.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      |++.+.||+|+||.||+|.++.+++.||+|.+.+..       ..+.+|+.+++.++|+||+++++++     ....++|
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~~   76 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeEE
Confidence            888999999999999999999999999999986421       2356899999999999999999999     5556799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh---------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV---------  213 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~---------  213 (335)
                      +|||||+| +|..++....  ...+++..+..++.||+.||.|||++++            + .....+..         
T Consensus        77 lv~e~~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             EEEEecCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence            99999995 9987776422  3468999999999999999999999980            0 00000111         


Q ss_pred             -------cCCCC---HHHhhhhCCCCC--C--------------CCCCCCCC-----------CccccccccCCChHHHH
Q 019844          214 -------LGTPT---REEIKCMNPNYT--E--------------FKFPQIKP-----------HPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       214 -------~g~~~---~~~~~~~~~~~~--~--------------~~~~~~~~-----------~~~~~~~~~~~s~~~~~  256 (335)
                             .|++.   ++.+........  -              ..+.....           ......++..+++++.+
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~  234 (285)
T cd05631         155 GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKS  234 (285)
T ss_pred             CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHH
Confidence                   22222   111110000000  0              00000000           00011234568899999


Q ss_pred             HHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ||++||+.||.+||+     ++++++||||....+
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         235 ICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINF  269 (285)
T ss_pred             HHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence            999999999999997     899999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=1.4e-26  Score=208.56  Aligned_cols=117  Identities=26%  Similarity=0.457  Sum_probs=101.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .+|.+.+.||.|+||.||+|.++.+++.||+|++...      ...+.+|+.+|+.++||||+++++++.... ....++
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~   83 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDV   83 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceE
Confidence            5699999999999999999999999999999998643      234668999999999999999999875433 345678


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.|+|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        84 ~lv~e~~~~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~  127 (334)
T cd07855          84 YVVMDLMESDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSAN  127 (334)
T ss_pred             EEEEehhhhhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999999888865    556999999999999999999999988

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=3.1e-26  Score=208.43  Aligned_cols=118  Identities=22%  Similarity=0.306  Sum_probs=99.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++...      ...+.+|+.+++.++||||+++++++..... ...
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            456799999999999999999999999999999998642      2446689999999999999999999854321 122


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|+||||++++|.+.+.      ..+++..++.++.||+.||.|||+++
T Consensus        99 ~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~  143 (359)
T cd07876          99 QDVYLVMELMDANLCQVIH------MELDHERMSYLLYQMLCGIKHLHSAG  143 (359)
T ss_pred             ceeEEEEeCCCcCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4578999999998777664      24889999999999999999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.4e-26  Score=210.98  Aligned_cols=112  Identities=27%  Similarity=0.416  Sum_probs=101.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|+++.+++.||||++.+.       ...+.+|+.+|+.++||||++++++|     ....++
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~   76 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENYL   76 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCeE
Confidence            599999999999999999999999999999999642       13456899999999999999999999     666779


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||.| +|.+++..    .+.+++..++.|+.||+.||+|||+++
T Consensus        77 ~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~  121 (364)
T cd05599          77 YLIMEYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKLG  121 (364)
T ss_pred             EEEECCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999985 99999876    567999999999999999999999998

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-28  Score=222.31  Aligned_cols=194  Identities=21%  Similarity=0.313  Sum_probs=147.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc----cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ----DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .+-|.|+..||.|+||+||+|..+.++-..|.|+|.-    ....+.-||+||..++||+||++++.|+-.     +.+|
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e-----nkLw  105 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE-----NKLW  105 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc-----CceE
Confidence            3458999999999999999999999999999999852    234567899999999999999999999543     3499


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------cC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------VD  205 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------~~  205 (335)
                      |+.|||+| -+..++-..   ...|++.+++.+++|+|.||.|||+++                              ..
T Consensus       106 iliEFC~GGAVDaimlEL---~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~  182 (1187)
T KOG0579|consen  106 ILIEFCGGGAVDAIMLEL---GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS  182 (1187)
T ss_pred             EEEeecCCchHhHHHHHh---ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh
Confidence            99999997 777777664   567999999999999999999999998                              11


Q ss_pred             hHHhHhhhcCCCCHHH---hhhhCCCCCCCCCCCCCCCcc----------------------------------cccccc
Q 019844          206 QLVEIIKVLGTPTREE---IKCMNPNYTEFKFPQIKPHPW----------------------------------HKVFQK  248 (335)
Q Consensus       206 ~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~  248 (335)
                      ....--.+.|||++..   ..|-...-.+|.+   ..+.|                                  ...-|.
T Consensus       183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDy---kaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS  259 (1187)
T KOG0579|consen  183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDY---KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPS  259 (1187)
T ss_pred             HHhhhccccCCcccccchheeeccccCCCchh---hhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcc
Confidence            1122234578887322   2222111111110   11111                                  112346


Q ss_pred             CCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          249 RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       249 ~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      .++..+.||+.+||..||..||+++++|+||||+...
T Consensus       260 ~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  260 HWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             hhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence            7889999999999999999999999999999998653

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.94  E-value=3.3e-26  Score=201.32  Aligned_cols=113  Identities=33%  Similarity=0.510  Sum_probs=99.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||+|.++.+|+.||+|.+...      ...+.+|+.+++.++||||+++++++     .+..++|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence            489999999999999999999999999999998632      13466899999999999999999999     5556699


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||++++|.+++...   .+.+++..++.++.||+.||.|||+++
T Consensus        76 lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~  119 (284)
T cd07839          76 LVFEYCDQDLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSHN  119 (284)
T ss_pred             EEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999888877642   456999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=2.8e-26  Score=206.23  Aligned_cols=231  Identities=27%  Similarity=0.423  Sum_probs=163.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||.|+||.||+|++..+++.||||.+...      .+.+.+|+.+++.++||||+++++++..........+|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            589999999999999999999989999999998642      24577899999999999999999998554323334689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------ChH-Hh--------------
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQL-VE--------------  209 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~~-~~--------------  209 (335)
                      +||||+.++|.+++..    ...+++..++.++.||+.||.|||++|+            +.. ..              
T Consensus        81 lv~e~~~~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          81 IVTELMETDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             EEecchhhhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            9999999999888875    4579999999999999999999999980            000 00              


Q ss_pred             ------HhhhcCCCC---HHHhh----------------------hhCCCCCCCC-------------------------
Q 019844          210 ------IIKVLGTPT---REEIK----------------------CMNPNYTEFK-------------------------  233 (335)
Q Consensus       210 ------~~~~~g~~~---~~~~~----------------------~~~~~~~~~~-------------------------  233 (335)
                            .....+++.   ++.+.                      .+.+.+....                         
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS  236 (330)
T ss_pred             ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence                  000011111   11000                      0011110000                         


Q ss_pred             ---------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019844          234 ---------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK  304 (335)
Q Consensus       234 ---------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~  304 (335)
                               ........+...+ +.+++++.+||.+||+.||.+|||+.++|+||||+....+..+.+..    ..++|.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~----~~~~~~  311 (330)
T cd07834         237 EKARNYLKSLPKKPKKPLSKLF-PGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAK----PPFDFD  311 (330)
T ss_pred             cchhhHHhhcccCCcchhHHhc-ccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCC----Cccccc
Confidence                     0000000111111 45789999999999999999999999999999999998877665542    334665


Q ss_pred             cccCCCCCHHHHhhcChH
Q 019844          305 PPELSGIPPETINRLIPE  322 (335)
Q Consensus       305 ~~~~~~~~~~~~~~~~~~  322 (335)
                      +.+.+.+..++.++.|.+
T Consensus       312 ~~~~~~~~~~~~~~~~~~  329 (330)
T cd07834         312 FFDDDELTEEELKELIYE  329 (330)
T ss_pred             ccchhhcCHHHHhHHhhc
Confidence            566777888888777654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-26  Score=205.63  Aligned_cols=187  Identities=27%  Similarity=0.367  Sum_probs=133.8

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||+|+||.||+|.+..+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ....++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence            79999999999999999999999998642       13456899999999999999999999     5566799999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-H-Hh----------------Hh
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-L-VE----------------II  211 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~-~~----------------~~  211 (335)
                      +| +|.+++..    .+.+++..++.++.||+.||.|||++++            +. . ..                ..
T Consensus        76 ~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  151 (312)
T cd05585          76 NGGELFHHLQR----EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTN  151 (312)
T ss_pred             CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccc
Confidence            96 99998876    5679999999999999999999999881            00 0 00                00


Q ss_pred             hhcCCCC---HHHhhhhCCC--CCCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhccCC
Q 019844          212 KVLGTPT---REEIKCMNPN--YTEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFFQYS  265 (335)
Q Consensus       212 ~~~g~~~---~~~~~~~~~~--~~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L~~d  265 (335)
                      ..+|++.   ++.+......  ..-|.+.-      ....+|               ...++..+++++.+||.+||..|
T Consensus       152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  231 (312)
T cd05585         152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRD  231 (312)
T ss_pred             cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCC
Confidence            1123322   1111100000  00000000      000000               11244678899999999999999


Q ss_pred             CCCCC---CHHHHhcCcccccCC
Q 019844          266 PNLRC---TALEACVHPFFDELR  285 (335)
Q Consensus       266 P~~R~---t~~~~L~hp~f~~~~  285 (335)
                      |.+||   ++.++|+||||.+..
T Consensus       232 p~~R~~~~~~~e~l~hp~~~~~~  254 (312)
T cd05585         232 PTRRLGYNGAQEIKNHPFFSQLS  254 (312)
T ss_pred             HHHcCCCCCHHHHHcCCCcCCCC
Confidence            99997   589999999999863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.94  E-value=1.1e-26  Score=207.84  Aligned_cols=190  Identities=25%  Similarity=0.350  Sum_probs=135.3

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||+||+|.++.+++.||||++.+.       .....+|+.+++.+ +||||+++++++     ....++|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence            4699999999999999999999999999753       23456788999888 799999999999     5566799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV------------  213 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~------------  213 (335)
                      ||++| +|...+..    .+.+++..++.++.||+.||.|||++++            + .....+..            
T Consensus        76 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  151 (318)
T cd05570          76 EYVNGGDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV  151 (318)
T ss_pred             cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC
Confidence            99986 99888875    5679999999999999999999999981            0 00000111            


Q ss_pred             -----cCCCC---HHHhhhhCCCC--C--------------CCCCCCCCCC-------ccccccccCCChHHHHHHHHhc
Q 019844          214 -----LGTPT---REEIKCMNPNY--T--------------EFKFPQIKPH-------PWHKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       214 -----~g~~~---~~~~~~~~~~~--~--------------~~~~~~~~~~-------~~~~~~~~~~s~~~~~li~~~L  262 (335)
                           +|++.   ++.+.......  .              ...+......       .....++..+++++.+||++||
T Consensus       152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l  231 (318)
T cd05570         152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFL  231 (318)
T ss_pred             cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHc
Confidence                 12222   11111100000  0              0000000000       0011234568999999999999


Q ss_pred             cCCCCCCCCH-----HHHhcCcccccCCC
Q 019844          263 QYSPNLRCTA-----LEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~-----~~~L~hp~f~~~~~  286 (335)
                      +.||++||++     .++++||||....+
T Consensus       232 ~~dP~~R~s~~~~~~~~ll~~~~~~~~~~  260 (318)
T cd05570         232 TKNPEKRLGCLPTGEQDIKGHPFFREIDW  260 (318)
T ss_pred             cCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            9999999999     99999999988654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.94  E-value=1e-26  Score=209.72  Aligned_cols=198  Identities=26%  Similarity=0.315  Sum_probs=142.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCC-cEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETG-EIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..++|.+.+.||+|+||.||+|.++.++ ..||+|++.+.       ...+.+|+.+++.++||||+++++++     ..
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~  102 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----KD  102 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----Ee
Confidence            3456999999999999999999976655 68999998532       23466899999999999999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HHh--------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LVE--------  209 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~~--------  209 (335)
                      ..++|+||||+.| +|.+++..    .+.+++..++.++.||+.||.|||+++            ++. ...        
T Consensus       103 ~~~~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a  178 (340)
T PTZ00426        103 ESYLYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFA  178 (340)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCC
Confidence            6679999999985 99999876    567999999999999999999999998            000 000        


Q ss_pred             ------HhhhcCCCC---HHHhhhhCCCC--CCCC------------CCCCCCCc---------cccccccCCChHHHHH
Q 019844          210 ------IIKVLGTPT---REEIKCMNPNY--TEFK------------FPQIKPHP---------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       210 ------~~~~~g~~~---~~~~~~~~~~~--~~~~------------~~~~~~~~---------~~~~~~~~~s~~~~~l  257 (335)
                            .....|++.   ++.+.......  .-|.            .|.....+         -...++..+++.+.++
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l  258 (340)
T PTZ00426        179 KVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHL  258 (340)
T ss_pred             eecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence                  011223332   22211110000  0000            00000000         0012356688999999


Q ss_pred             HHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      |++||+.||.+|+     ++.++++||||....+
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~  292 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDW  292 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            9999999999996     8999999999998754

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.5e-26  Score=202.38  Aligned_cols=197  Identities=22%  Similarity=0.288  Sum_probs=139.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .|++.++||+|+||.||++.+..+++.||||++....       ..+.+|+.+++.++||||+++++++     ....++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence            3889999999999999999999999999999986421       2356899999999999999999999     555679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh---------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK---------  212 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~---------  212 (335)
                      |+||||++| +|.+++....  ...+++..+..++.||+.||.|||++++            +. ....+.         
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            999999985 9988776422  3569999999999999999999999880            00 000000         


Q ss_pred             -------hcCCCC---HHHhhhhCCCC--C--------------CCCCCCCCCC-----------ccccccccCCChHHH
Q 019844          213 -------VLGTPT---REEIKCMNPNY--T--------------EFKFPQIKPH-----------PWHKVFQKRLPPEAV  255 (335)
Q Consensus       213 -------~~g~~~---~~~~~~~~~~~--~--------------~~~~~~~~~~-----------~~~~~~~~~~s~~~~  255 (335)
                             ..|++.   ++.+.......  .              ...+......           .....++..+++.+.
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
T cd05605         154 EGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAAR  233 (285)
T ss_pred             CCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHH
Confidence                   112221   11110000000  0              0000000000           001123346789999


Q ss_pred             HHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          256 DLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       256 ~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      +||.+||..||.+||     ++.++++||||....+
T Consensus       234 ~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05605         234 SICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANF  269 (285)
T ss_pred             HHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCH
Confidence            999999999999999     8999999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=2.3e-26  Score=206.67  Aligned_cols=190  Identities=23%  Similarity=0.328  Sum_probs=135.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ....++|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence            4699999999999999999999999999643       13456899999999999999999999     56667999999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHh---------------
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEII---------------  211 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~---------------  211 (335)
                      |++| +|...+..    ...+++..++.++.||+.||.|||++++            + .....+               
T Consensus        76 y~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~  151 (328)
T cd05593          76 YVNGGELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT  151 (328)
T ss_pred             CCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc
Confidence            9996 89888765    5679999999999999999999999981            0 000001               


Q ss_pred             --hhcCCCC---HHHhhhhCCC--CCCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhcc
Q 019844          212 --KVLGTPT---REEIKCMNPN--YTEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFFQ  263 (335)
Q Consensus       212 --~~~g~~~---~~~~~~~~~~--~~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L~  263 (335)
                        ..+|++.   ++.+......  ..-|.+.-      ....+|               ...++..+++++.+||++||+
T Consensus       152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  231 (328)
T cd05593         152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLI  231 (328)
T ss_pred             cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcC
Confidence              1123322   1111100000  00000000      000011               112456788999999999999


Q ss_pred             CCCCCCC-----CHHHHhcCcccccCCC
Q 019844          264 YSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       264 ~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .||++|+     ++.++++||||....+
T Consensus       232 ~dP~~R~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         232 KDPNKRLGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             CCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            9999997     8999999999987543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=5.1e-27  Score=209.28  Aligned_cols=197  Identities=22%  Similarity=0.312  Sum_probs=148.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|.+++++|+|+||.+++++++..++.|++|.|...      .+...+|+.+++++.|||||.+++.|.    .+..++
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~l   79 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQLL   79 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCceE
Confidence            4699999999999999999999999999999999632      346789999999999999999999994    444559


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------c
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------V  204 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------~  204 (335)
                      ||||+||+| +|.+.+....  +..|+|..+..|+.||+.||.|||+++                              .
T Consensus        80 ~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~  157 (426)
T KOG0589|consen   80 CIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN  157 (426)
T ss_pred             EEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence            999999996 9999998755  567999999999999999999999776                              0


Q ss_pred             ChHHhHhhhcCCCCHH---HhhhhCCCCCC---------CC----CCCCCCCcc-----------ccccccCCChHHHHH
Q 019844          205 DQLVEIIKVLGTPTRE---EIKCMNPNYTE---------FK----FPQIKPHPW-----------HKVFQKRLPPEAVDL  257 (335)
Q Consensus       205 ~~~~~~~~~~g~~~~~---~~~~~~~~~~~---------~~----~~~~~~~~~-----------~~~~~~~~s~~~~~l  257 (335)
                      .......+.+|||.+.   .+.....++..         |.    -+.+....+           -...+..++.+++.+
T Consensus       158 ~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~l  237 (426)
T KOG0589|consen  158 PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSL  237 (426)
T ss_pred             CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHH
Confidence            0001223456666632   22221111100         00    000111111           123456789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      |..||..+|..||++.++|.+|....+
T Consensus       238 v~~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  238 VKSMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             HHHHhhcCCccCCCHHHHhhChhhhhH
Confidence            999999999999999999999987744

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.1e-26  Score=206.31  Aligned_cols=195  Identities=26%  Similarity=0.407  Sum_probs=140.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|++..+++.||||++.+.       ...+.+|+.+++.++||||+++++++     ....++
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~~   76 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEYL   76 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCEE
Confidence            599999999999999999999999999999999643       23466899999999999999999999     566679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--HHhH----------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--LVEI----------  210 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--~~~~----------  210 (335)
                      ||||||++| +|.+++..    .+.+++..++.++.||+.||.|||++++            +.  ..++          
T Consensus        77 ~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~  152 (333)
T cd05600          77 YLAMEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV  152 (333)
T ss_pred             EEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence            999999986 99999976    5679999999999999999999999881            00  0000          


Q ss_pred             ---hhhcCCCC---HHHhhhhCCCC--CCC--------------CCCCCCCC-------ccccc--cc------cCCChH
Q 019844          211 ---IKVLGTPT---REEIKCMNPNY--TEF--------------KFPQIKPH-------PWHKV--FQ------KRLPPE  253 (335)
Q Consensus       211 ---~~~~g~~~---~~~~~~~~~~~--~~~--------------~~~~~~~~-------~~~~~--~~------~~~s~~  253 (335)
                         ...+|++.   ++.+.......  .-|              .+......       .|...  .+      ..++++
T Consensus       153 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~  232 (333)
T cd05600         153 TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDE  232 (333)
T ss_pred             cccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHH
Confidence               11223332   22111100000  000              00000000       00000  00      145899


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +.+||.+||..+|.+|+++.++++||||....+
T Consensus       233 ~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         233 AWDLITKLINDPSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             HHHHHHHHhhChhhhcCCHHHHHhCcccCCCCH
Confidence            999999999999999999999999999998654

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=3.1e-26  Score=205.49  Aligned_cols=188  Identities=24%  Similarity=0.360  Sum_probs=134.8

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHH---HhCCCCceeeeceeeeeCCCCCcc
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIM---QMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l---~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      |++.+.||+|+||.||+|.++.+++.||||++++.       ...+.+|+.++   +.++||||+++++++     ....
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~   75 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED   75 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence            67899999999999999999999999999999642       13455666655   566899999999999     5566


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhhc-----
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKVL-----  214 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~~-----  214 (335)
                      ++|+||||++| +|..++.     .+.+++..++.++.||+.||.|||++++            + .....+..+     
T Consensus        76 ~~~lv~E~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~  150 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIH-----TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKE  150 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCcc
Confidence            79999999996 8887765     3569999999999999999999999981            0 000001111     


Q ss_pred             ------------CCCCHHHhhhhCCCCCCCCCCCCCCCcc-------------------------------ccccccCCC
Q 019844          215 ------------GTPTREEIKCMNPNYTEFKFPQIKPHPW-------------------------------HKVFQKRLP  251 (335)
Q Consensus       215 ------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~s  251 (335)
                                  |++.+     +.|+...........+.|                               ...++..++
T Consensus       151 ~~~~~~~~~~~~g~~~y-----~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~  225 (324)
T cd05589         151 GMGFGDRTSTFCGTPEF-----LAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS  225 (324)
T ss_pred             CCCCCCcccccccCccc-----cCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCC
Confidence                        22211     111100000000000111                               012445689


Q ss_pred             hHHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      +++.+||.+||+.||.+||     ++.++++||||....+
T Consensus       226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~  265 (324)
T cd05589         226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINW  265 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence            9999999999999999999     6999999999987643

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=2.1e-26  Score=206.40  Aligned_cols=185  Identities=26%  Similarity=0.355  Sum_probs=135.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||+|+++.+|+.||+|++.+.       ...+.+|+.+++.++||||++++++|     ....++|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence            4699999999999999999999999998643       13356899999999999999999999     55567999999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh--------------
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK--------------  212 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~--------------  212 (335)
                      |++| +|..++..    .+.+++..++.++.||+.||.|||++++            +. ....+.              
T Consensus        76 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  151 (323)
T cd05595          76 YANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  151 (323)
T ss_pred             CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc
Confidence            9996 99888765    5679999999999999999999999980            00 000001              


Q ss_pred             ---hcCCCCHHHhhhhCCCCCCCCCCCCCCCcc-------------------------------ccccccCCChHHHHHH
Q 019844          213 ---VLGTPTREEIKCMNPNYTEFKFPQIKPHPW-------------------------------HKVFQKRLPPEAVDLV  258 (335)
Q Consensus       213 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~s~~~~~li  258 (335)
                         ..|++.     ++.|+...........+.|                               ...++..+++++.+||
T Consensus       152 ~~~~~gt~~-----y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li  226 (323)
T cd05595         152 MKTFCGTPE-----YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLL  226 (323)
T ss_pred             cccccCCcC-----cCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence               112221     1111111000000000111                               0123467899999999


Q ss_pred             HHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .+||+.||.+|+     ++.++++||||....+
T Consensus       227 ~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         227 AGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             HHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            999999999998     8999999999987653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=1.3e-25  Score=203.97  Aligned_cols=118  Identities=23%  Similarity=0.304  Sum_probs=99.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++...      ...+.+|+.+++.++||||+++++++..... ...
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            456799999999999999999999999999999998642      2456689999999999999999999854322 233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|+||||++++|.+.+..      .+++..++.++.||+.||.|||++|
T Consensus        95 ~~~~lv~e~~~~~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~g  139 (355)
T cd07874          95 QDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_pred             ceeEEEhhhhcccHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45789999999988776642      4889999999999999999999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.94  E-value=9.7e-26  Score=202.81  Aligned_cols=113  Identities=24%  Similarity=0.411  Sum_probs=100.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|.+.+.||+|+||.||+|.++.+++.||+|++++..       ..+.+|+.+++.++||||+++++++     ....++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~~   76 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDNL   76 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeE
Confidence            5999999999999999999999999999999997432       3467899999999999999999998     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        77 ~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~  122 (330)
T cd05601          77 YLVMEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQMG  122 (330)
T ss_pred             EEEECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999985 999998763   357999999999999999999999988

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.94  E-value=7.6e-26  Score=205.37  Aligned_cols=190  Identities=22%  Similarity=0.342  Sum_probs=136.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...+|++++.||+|+||.||+|++..+++.||||++...     ...+.+|+.+++.++|+||+++++++     .....
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~  146 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGE  146 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCe
Confidence            345699999999999999999999999999999998543     24567999999999999999999999     55667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-C------------hHHhHhhhc------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-D------------QLVEIIKVL------  214 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-~------------~~~~~~~~~------  214 (335)
                      +|+|||||.| +|.+        .....+..+..++.||+.||.|||++++ +            .....+..+      
T Consensus       147 ~~lv~e~~~~~~L~~--------~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~  218 (353)
T PLN00034        147 IQVLLEFMDGGSLEG--------THIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRIL  218 (353)
T ss_pred             EEEEEecCCCCcccc--------cccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceec
Confidence            9999999996 7643        2346788889999999999999999880 0            000001111      


Q ss_pred             -----------CCCCHHHhhhhCCCCCC-----------------------------CCCCCCCCCccc-----------
Q 019844          215 -----------GTPTREEIKCMNPNYTE-----------------------------FKFPQIKPHPWH-----------  243 (335)
Q Consensus       215 -----------g~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~-----------  243 (335)
                                 |+..     ++.|++..                             ..+.......|.           
T Consensus       219 ~~~~~~~~~~~gt~~-----y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  293 (353)
T PLN00034        219 AQTMDPCNSSVGTIA-----YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP  293 (353)
T ss_pred             ccccccccccccCcc-----ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC
Confidence                       2221     11111100                             000000001110           


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      ...+..+++++++||.+||+.||++|||+.|+|+||||.....+
T Consensus       294 ~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~  337 (353)
T PLN00034        294 PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG  337 (353)
T ss_pred             CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence            11234678899999999999999999999999999999886543

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=2.7e-26  Score=207.52  Aligned_cols=119  Identities=28%  Similarity=0.403  Sum_probs=100.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|++++.||+|+||.||+|.+..+++.||||++...      ...+.+|+.+++.++||||++++++|..... ...
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            346799999999999999999999999999999998643      2345689999999999999999998853221 223


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|++|+++.++|.+++.     ...+++..++.++.||+.||.|||+++
T Consensus        93 ~~~~~~~~~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~  138 (343)
T cd07878          93 NEVYLVTNLMGADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSAG  138 (343)
T ss_pred             CcEEEEeecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4578999999889988775     356999999999999999999999998

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.94  E-value=1e-25  Score=199.68  Aligned_cols=113  Identities=31%  Similarity=0.541  Sum_probs=99.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|.+.+.||.|+||.||+|.+..+++.||||.+....         ..+..|+.+++.++|+||+++++++     ....
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVF-----GHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhhee-----ecCC
Confidence            4889999999999999999999999999999996432         2356799999999999999999999     5566


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|+||||+.|+|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~  122 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSNW  122 (298)
T ss_pred             EEEEEEcccCCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            79999999966999998752   126999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.5e-25  Score=206.06  Aligned_cols=114  Identities=22%  Similarity=0.296  Sum_probs=99.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc--CCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR--ETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ...+|.+++.||+|+||.||+|...  .+++.||+|.+... ....+|+.+|+.++|||||+++++|     .....+|+
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~~l  163 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-KTPGREIDILKTISHRAIINLIHAY-----RWKSTVCM  163 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-ccHHHHHHHHHhcCCCCccceeeeE-----eeCCEEEE
Confidence            3457999999999999999999764  35678999988653 4567899999999999999999999     55667999


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||++.++|.+++..    ...+++..++.|+.||+.||.|||+++
T Consensus       164 v~e~~~~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~g  205 (392)
T PHA03207        164 VMPKYKCDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGRG  205 (392)
T ss_pred             EehhcCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999888854    567999999999999999999999998

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=5e-26  Score=204.73  Aligned_cols=114  Identities=21%  Similarity=0.331  Sum_probs=100.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|++.+.||+|+||.||+|+++.++..||+|.+....     ..+.+|+.+|+.++||||+++++++     .....+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   78 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI   78 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECCEE
Confidence            457999999999999999999999999999999986432     4577999999999999999999999     445568


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||++| +|.+++..    ...+++..++.++.|++.||.|||+.+
T Consensus        79 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (331)
T cd06649          79 SICMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH  123 (331)
T ss_pred             EEEeecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            999999996 99999876    567999999999999999999999853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.1e-27  Score=208.40  Aligned_cols=198  Identities=23%  Similarity=0.271  Sum_probs=149.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ...-|.+.+.||+|-|++|.+|++.-||..||||+|.+..      ..+.+|++.|+.++|||||++|++.     ..+.
T Consensus        16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi-----DTQT   90 (864)
T KOG4717|consen   16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI-----DTQT   90 (864)
T ss_pred             eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-----cccc
Confidence            3445999999999999999999999999999999997643      4577999999999999999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      .+|+|+|+-+| ||+++|..+   ...+.|..++.||.||+.|+.|+|...                             
T Consensus        91 KlyLiLELGD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSN  167 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSN  167 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccc
Confidence            69999999995 999999864   467999999999999999999999876                             


Q ss_pred             -cChHHhHhhhcCCCCHHHhh-------------------------hhCCCCCCCC----CCCCCCCccccccccCCChH
Q 019844          204 -VDQLVEIIKVLGTPTREEIK-------------------------CMNPNYTEFK----FPQIKPHPWHKVFQKRLPPE  253 (335)
Q Consensus       204 -~~~~~~~~~~~g~~~~~~~~-------------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~  253 (335)
                       .....+..+.||...|....                         |+.+.|.+..    +-.+.  .-....|..++.+
T Consensus       168 kf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm--DCKYtvPshvS~e  245 (864)
T KOG4717|consen  168 KFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM--DCKYTVPSHVSKE  245 (864)
T ss_pred             cCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh--cccccCchhhhHH
Confidence             01111222334433321111                         1111111100    00000  1112346778999


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      ++|||..||+.||.+|.+.++|..|+|++....+
T Consensus       246 CrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~  279 (864)
T KOG4717|consen  246 CRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRG  279 (864)
T ss_pred             HHHHHHHHHhcCchhhccHHHHhccccccCCCCC
Confidence            9999999999999999999999999999987654

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.94  E-value=3.2e-26  Score=201.22  Aligned_cols=192  Identities=22%  Similarity=0.270  Sum_probs=135.0

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||+|+||+||+|.++.+++.||+|.+.+..       ..+..|+.+++.++||||+++++++     ....++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence            799999999999999999999999986421       3356799999999999999999998     5566699999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh---------------
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV---------------  213 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~---------------  213 (335)
                      +| +|..++.........+++..++.++.||+.||.|||++++            +. ....+..               
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  155 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK  155 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence            95 9988876543335679999999999999999999999981            00 0000011               


Q ss_pred             --cCCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-----------ccccccccCCChHHHHHHHHh
Q 019844          214 --LGTPT---REEIKCMNPNYT----------------EFKFPQIKPH-----------PWHKVFQKRLPPEAVDLVCRF  261 (335)
Q Consensus       214 --~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-----------~~~~~~~~~~s~~~~~li~~~  261 (335)
                        .|++.   ++.+........                ...+......           .-...++..+++++.+|+.+|
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  235 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEAL  235 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHH
Confidence              12221   111110000000                0000000000           000123356789999999999


Q ss_pred             ccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          262 FQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       262 L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      |+.||++||     +++++++||||++..+
T Consensus       236 l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~  265 (280)
T cd05608         236 LAKDPEKRLGFRDGNCDGLRTHPLFRDLNW  265 (280)
T ss_pred             hcCCHHHhcCCCCCCHHHHhcChhhhcCCH
Confidence            999999999     8899999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.94  E-value=4.8e-27  Score=195.78  Aligned_cols=204  Identities=21%  Similarity=0.271  Sum_probs=147.6

Q ss_pred             cceeeeEEe-eeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAE-HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...++|.+- ++||-|-.|+|..|.++.|++.+|+|++.. ....++|++++... .|||||.++++|...- .+..++.
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-s~KARrEVeLHw~~s~h~~iV~IidVyeNs~-~~rkcLL  135 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-SPKARREVELHWMASGHPHIVSIIDVYENSY-QGRKCLL  135 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-CHHHHhHhhhhhhhcCCCceEEeehhhhhhc-cCceeeE
Confidence            345567774 689999999999999999999999997754 56688999998777 6999999999995433 4567788


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcCh-----------------------------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQ-----------------------------  206 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~~-----------------------------  206 (335)
                      ||||+|+| .|+.-+...+  .+.|+|.++..|++||+.|+.|||+.++-.                             
T Consensus       136 iVmE~meGGeLfsriq~~g--~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~  213 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRG--DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKE  213 (400)
T ss_pred             eeeecccchHHHHHHHHcc--cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccc
Confidence            99999996 9998888744  667999999999999999999999998100                             


Q ss_pred             ---HHhHhhhcCCCCHHHh------------------------hhhCCCC-CCCCCC-------CC--CCCccccccccC
Q 019844          207 ---LVEIIKVLGTPTREEI------------------------KCMNPNY-TEFKFP-------QI--KPHPWHKVFQKR  249 (335)
Q Consensus       207 ---~~~~~~~~g~~~~~~~------------------------~~~~~~~-~~~~~~-------~~--~~~~~~~~~~~~  249 (335)
                         -....+-|-||.|...                        .|+-|.| ......       .+  ....|...-|..
T Consensus       214 t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~  293 (400)
T KOG0604|consen  214 TQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSC  293 (400)
T ss_pred             cCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhH
Confidence               0011111222221111                        1121111 110000       00  011222334567


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +|++++|+|+++|..+|.+|.|+.+++.|||+.+...
T Consensus       294 VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  294 VSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             HHHHHHHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence            8999999999999999999999999999999988754

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=5.2e-26  Score=203.64  Aligned_cols=190  Identities=27%  Similarity=0.421  Sum_probs=134.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|+++.+++.||||++.+..       ....+|+.++..+ +||||+++++++     ....++|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence            46999999999999999999999999986431       3455788888877 799999999999     5566799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhh-------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIK-------------  212 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~-------------  212 (335)
                      |||+| +|..++..    ...+++..++.++.||+.||.|||++++            + .....+.             
T Consensus        76 Ey~~~g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~  151 (320)
T cd05590          76 EFVNGGDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK  151 (320)
T ss_pred             cCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC
Confidence            99996 99888876    5679999999999999999999999981            0 0000011             


Q ss_pred             ----hcCCCC---HHHhhhhCCCC--CCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhc
Q 019844          213 ----VLGTPT---REEIKCMNPNY--TEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       213 ----~~g~~~---~~~~~~~~~~~--~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L  262 (335)
                          ..|++.   ++.+.......  .-|.+.-      ....+|               ...++..+++++.+||++||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L  231 (320)
T cd05590         152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFM  231 (320)
T ss_pred             cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHc
Confidence                122222   11111100000  0000000      000011               01234568899999999999


Q ss_pred             cCCCCCCCCH------HHHhcCcccccCCC
Q 019844          263 QYSPNLRCTA------LEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~------~~~L~hp~f~~~~~  286 (335)
                      +.||.+|+++      .++++||||..+.+
T Consensus       232 ~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         232 TKNPTMRLGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             ccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence            9999999998      99999999988654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=3.4e-25  Score=197.43  Aligned_cols=118  Identities=31%  Similarity=0.485  Sum_probs=100.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++.+.||+|+||.||+|.++.+|+.||+|.+....      ....+|+.+++.++|+||+++++++..   ....
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~   81 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLD   81 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCC
Confidence            3456999999999999999999999999999999986321      234589999999999999999999843   2234


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++||||+.++|.+++...   ...+++..++.++.||+.||.|||+.+
T Consensus        82 ~~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (309)
T cd07845          82 SIFLVMEYCEQDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENF  128 (309)
T ss_pred             eEEEEEecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            58899999999988888753   356899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.2e-26  Score=206.18  Aligned_cols=112  Identities=27%  Similarity=0.420  Sum_probs=101.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|.+.+.||+|+||.||+|++..+++.||||++.+.       ...+.+|+.++..++||||+++++++     ....++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~   76 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEHL   76 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCeE
Confidence            599999999999999999999999999999999642       23467899999999999999999999     566679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++..    .+.+++..++.++.||+.||.|||++|
T Consensus        77 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g  121 (350)
T cd05573          77 YLVMEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKLG  121 (350)
T ss_pred             EEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999986 99999886    467999999999999999999999988

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=1.9e-25  Score=202.73  Aligned_cols=118  Identities=25%  Similarity=0.345  Sum_probs=100.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ...+|++.+.||+|+||.||+|.+..+++.||||.+.+.      ...+.+|+.+++.++||||++++++|..... .+.
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            446799999999999999999999999999999998642      2345689999999999999999999854322 233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++|+||||+.++|.+.+..      .+++..++.++.||+.||+|||++|
T Consensus        94 ~~~~lv~e~~~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~g  138 (353)
T cd07850          94 QDVYLVMELMDANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSAG  138 (353)
T ss_pred             CcEEEEEeccCCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45789999999988887753      2899999999999999999999988

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.94  E-value=1e-25  Score=198.29  Aligned_cols=115  Identities=30%  Similarity=0.558  Sum_probs=100.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||.|+||.||+|+++.++..||+|++...      ...+.+|+.+++.++||||+++++++     ....++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVL-----MQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEE-----eeCCeEE
Confidence            489999999999999999999999999999998532      13467899999999999999999999     4556699


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|.+++..... ...+++..++.++.||+.||.|||+++
T Consensus        76 ~v~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~  121 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSRR  121 (285)
T ss_pred             EEEecCCCCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999998888865331 356999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.94  E-value=5.3e-26  Score=204.39  Aligned_cols=107  Identities=25%  Similarity=0.484  Sum_probs=94.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.++.+++.||||++++..       ..+.+|+.++..+ +||||++++++|     ....++|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence            46999999999999999999999999997421       3466899999998 799999999999     5566799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+| +|..++..    .+.+++..++.|+.||+.||.|||+++
T Consensus        76 e~~~~g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~  116 (329)
T cd05588          76 EFVSGGDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHERG  116 (329)
T ss_pred             eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996 99888765    567999999999999999999999998

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.94  E-value=8e-26  Score=207.26  Aligned_cols=112  Identities=21%  Similarity=0.341  Sum_probs=100.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .|.+++.||+|+||+||+|+++.+++.||||++.+.       ...+.+|+.+++.++||||+++++++     .+..++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence            489999999999999999999999999999999642       13467899999999999999999999     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.++.||+.||+|||+++
T Consensus        77 ~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~g  121 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKMG  121 (381)
T ss_pred             EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999986 99999876    567999999999999999999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.94  E-value=1.3e-25  Score=203.61  Aligned_cols=201  Identities=25%  Similarity=0.324  Sum_probs=149.0

Q ss_pred             ccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           78 SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        78 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ......|.+.+.||+|.|++|.++++..++..||||.|.+..      ..+.+|+++|+.|+|||||+++.+.     ..
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t  126 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ET  126 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----ee
Confidence            344556999999999999999999999999999999997642      3367999999999999999999999     45


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-------------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-------------  205 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-------------  205 (335)
                      ...+|+||||+.| .+++++..    ++++.+..++.++.|+++|++|||+++            .+             
T Consensus       127 ~~~lylV~eya~~ge~~~yl~~----~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS  202 (596)
T KOG0586|consen  127 EATLYLVMEYASGGELFDYLVK----HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFS  202 (596)
T ss_pred             cceeEEEEEeccCchhHHHHHh----cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccc
Confidence            5559999999985 99999987    788999999999999999999999998            00             


Q ss_pred             ----hHHhHhhhcCCCCHHHhhhhC-CCCCCC---------------------C---CCCCCCCccc--cccccCCChHH
Q 019844          206 ----QLVEIIKVLGTPTREEIKCMN-PNYTEF---------------------K---FPQIKPHPWH--KVFQKRLPPEA  254 (335)
Q Consensus       206 ----~~~~~~~~~g~~~~~~~~~~~-~~~~~~---------------------~---~~~~~~~~~~--~~~~~~~s~~~  254 (335)
                          .....-+.||++.+....... ..|...                     .   +.........  ..++..++.++
T Consensus       203 ~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dc  282 (596)
T KOG0586|consen  203 TFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDC  282 (596)
T ss_pred             eeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechh
Confidence                011111234444422111100 001100                     0   0000111111  12345688999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      .++|+++|..||.+|++.+++..|.|.......
T Consensus       283 e~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  283 EDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             HHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            999999999999999999999999998776654

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=6.9e-26  Score=203.32  Aligned_cols=190  Identities=25%  Similarity=0.337  Sum_probs=135.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||+|.++.+++.||+|++.+..       ....+|+.+++.++||||+++++++     ....++|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence            46999999999999999999999999996431       3456799999999999999999998     55667999999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC------------cC-hHHhHhh-------------
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI------------VD-QLVEIIK-------------  212 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~------------~~-~~~~~~~-------------  212 (335)
                      |++| +|..++..    ...+++..++.++.||+.||.|||+ ++            ++ .....+.             
T Consensus        76 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~  151 (325)
T cd05594          76 YANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA  151 (325)
T ss_pred             CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc
Confidence            9996 89888765    5679999999999999999999997 56            00 0000011             


Q ss_pred             ----hcCCCC---HHHhhhhCCCC--CCCCCCCC------CCCcc---------------ccccccCCChHHHHHHHHhc
Q 019844          213 ----VLGTPT---REEIKCMNPNY--TEFKFPQI------KPHPW---------------HKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       213 ----~~g~~~---~~~~~~~~~~~--~~~~~~~~------~~~~~---------------~~~~~~~~s~~~~~li~~~L  262 (335)
                          .+|++.   ++.+.......  .-|.+.-+      ...+|               ...++..+++++.+||.+||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L  231 (325)
T cd05594         152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLL  231 (325)
T ss_pred             ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHh
Confidence                123332   22211110000  00000000      00011               11235568999999999999


Q ss_pred             cCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          263 QYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      +.||++|+     ++.++++||||....+
T Consensus       232 ~~dP~~R~~~~~~~~~~il~h~~~~~~~~  260 (325)
T cd05594         232 KKDPKQRLGGGPDDAKEIMQHKFFAGIVW  260 (325)
T ss_pred             hcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence            99999997     8999999999987643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.94  E-value=6.7e-26  Score=207.46  Aligned_cols=112  Identities=19%  Similarity=0.306  Sum_probs=101.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++++.||+|+||.||+|+++.+++.||||++.+.       ...+.+|+.+|+.++||||+++++.|     ....++
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~~   76 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL   76 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCEE
Confidence            599999999999999999999999999999998642       23467899999999999999999999     566679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.++.||+.||+|||+++
T Consensus        77 ~lv~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~~  121 (376)
T cd05598          77 YFVMDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKMG  121 (376)
T ss_pred             EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999985 99999876    567999999999999999999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.1e-26  Score=207.38  Aligned_cols=112  Identities=23%  Similarity=0.402  Sum_probs=100.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|.+++.||+|+||.||+|.++.+++.||||++.+.       ...+.+|+.+++.++|||||+++++|     .+..++
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~   76 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQYL   76 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCee
Confidence            599999999999999999999999999999998642       13467899999999999999999999     566679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.++.||+.||+|||+++
T Consensus        77 ~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~g  121 (377)
T cd05629          77 YLIMEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKLG  121 (377)
T ss_pred             EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999985 99998876    567999999999999999999999998

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.94  E-value=1e-25  Score=205.03  Aligned_cols=112  Identities=21%  Similarity=0.320  Sum_probs=101.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|.++.+++.||+|++.+.       ...+.+|+.++..++||||+++++++     ....++
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~~   76 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRNL   76 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCEE
Confidence            599999999999999999999999999999999642       23466899999999999999999999     666779


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.|+.||+.||.|||++|
T Consensus        77 ~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~g  121 (360)
T cd05627          77 YLIMEFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQLG  121 (360)
T ss_pred             EEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999996 99999876    567999999999999999999999998

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=4.2e-25  Score=195.05  Aligned_cols=114  Identities=27%  Similarity=0.489  Sum_probs=100.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ++|++.+.||.|+||.||+|.++.+++.||||.+....     ..+.+|+.+++.++||||+++++++     ....+.|
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeEE
Confidence            56999999999999999999999899999999986432     3456899999999999999999999     5566799


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++++|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        80 lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~~  123 (291)
T cd07844          80 LVFEYLDTDLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQRR  123 (291)
T ss_pred             EEEecCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999998888753   346899999999999999999999988

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=2.2e-25  Score=201.50  Aligned_cols=234  Identities=26%  Similarity=0.402  Sum_probs=163.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|.+.+.||+|+||.||+|++..+++.||+|++...      ...+.+|+.+++.++||||+++++++..... ...
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            455799999999999999999999999999999998642      1345689999999999999999998854332 233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhh-------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIK-------  212 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~-------  212 (335)
                      ..+|+|+||++++|.+++..     ..+++..++.++.||+.||.|||++++            + .....+.       
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~  167 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARH  167 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccc
Confidence            45889999998899988874     569999999999999999999999881            0 0000000       


Q ss_pred             -------hcCCCC---HHHhhh----------------------hCCCCCCCC---------------------------
Q 019844          213 -------VLGTPT---REEIKC----------------------MNPNYTEFK---------------------------  233 (335)
Q Consensus       213 -------~~g~~~---~~~~~~----------------------~~~~~~~~~---------------------------  233 (335)
                             ..+++.   ++.+..                      +.+.+....                           
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07851         168 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSES  247 (343)
T ss_pred             ccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchh
Confidence                   011111   111100                      000000000                           


Q ss_pred             -------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          234 -------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       234 -------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                             .+......+...+ ..+++++.+||.+||+.||.+|||+.++++||||.+...+...     +.+++++-+ .
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~-~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~-----~~~~~~~~~-~  320 (343)
T cd07851         248 ARNYIQSLPQMPKKDFKEVF-SGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDE-----PVAPPYDQS-F  320 (343)
T ss_pred             HHHHHHhccccCCCCHHHHh-ccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCccc-----ccccccCcc-h
Confidence                   0000000011111 3468999999999999999999999999999999988766543     234455533 6


Q ss_pred             cCCCCCHHHHhhcChHHHh
Q 019844          307 ELSGIPPETINRLIPEHAR  325 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~  325 (335)
                      ....+...+|++++..++-
T Consensus       321 ~~~~~~~~~~~~~~~~~~~  339 (343)
T cd07851         321 ESRDLTVDEWKELVYKEIM  339 (343)
T ss_pred             hhhhcCHHHHHHHhHHHHH
Confidence            6788889999999887654

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=8.4e-26  Score=202.16  Aligned_cols=189  Identities=25%  Similarity=0.343  Sum_probs=133.9

Q ss_pred             eeeeccCceEEEEEEE---cCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           88 HVVGTGSFGVVFQAKC---RETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~---~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      +.||+|+||.||++++   ..+|+.||+|++.+.      .....+|+.+++.++||||+++++++     .....+|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence            6799999999999986   357899999999642      23456899999999999999999999     555679999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHh-------------
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEII-------------  211 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~-------------  211 (335)
                      |||+.| +|.+++..    ...+++..++.++.||+.||.|||++++            + .....+             
T Consensus        77 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~  152 (318)
T cd05582          77 LDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  152 (318)
T ss_pred             EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC
Confidence            999985 99888865    5679999999999999999999999980            0 000001             


Q ss_pred             ----hhcCCCC---HHHhhhhCCCC--CCC-------CCCCCCCCccc---------------cccccCCChHHHHHHHH
Q 019844          212 ----KVLGTPT---REEIKCMNPNY--TEF-------KFPQIKPHPWH---------------KVFQKRLPPEAVDLVCR  260 (335)
Q Consensus       212 ----~~~g~~~---~~~~~~~~~~~--~~~-------~~~~~~~~~~~---------------~~~~~~~s~~~~~li~~  260 (335)
                          ..+|++.   ++.+.......  .-|       .+.. ...+|.               ..++..+++++.+||++
T Consensus       153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  231 (318)
T cd05582         153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRA  231 (318)
T ss_pred             CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeecc-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence                1122222   11111100000  000       0000 000110               12345678999999999


Q ss_pred             hccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          261 FFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       261 ~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ||+.||.+||+     +.+++.||||....+
T Consensus       232 ~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~  262 (318)
T cd05582         232 LFKRNPANRLGAGPDGVEEIKRHPFFSTIDW  262 (318)
T ss_pred             HhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence            99999999999     788999999987644

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.94  E-value=9.2e-26  Score=206.98  Aligned_cols=112  Identities=21%  Similarity=0.325  Sum_probs=100.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|.++++||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++|||||+++++|     .+..++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence            499999999999999999999999999999998643       23567899999999999999999999     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.++.||+.||+|||+++
T Consensus        77 ~lv~E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~~  121 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKMG  121 (382)
T ss_pred             EEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999995 99998876    567999999999999999999999998

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.94  E-value=3.8e-25  Score=194.64  Aligned_cols=113  Identities=35%  Similarity=0.541  Sum_probs=100.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||.|+||.||+|.+..+|+.||+|++....      ..+.+|+.+++.++||||+++++++     ....++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence            4899999999999999999999999999999986432      4577899999999999999999999     5566789


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        76 ~v~e~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  119 (286)
T cd07832          76 LVMEYMPSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHANG  119 (286)
T ss_pred             EEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999955999988753   356999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=1.5e-25  Score=201.05  Aligned_cols=195  Identities=24%  Similarity=0.287  Sum_probs=138.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCC-CceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDH-PNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~h-pnIv~~~~~~~~~~~~~~~~  154 (335)
                      +|++++.||+|+||.||+|+++.+++.||||++.+.       ...+..|+.++..++| ++|+++++++     ....+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence            489999999999999999999999999999998643       2345689999999976 5688899988     55566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh-------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV-------  213 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~-------  213 (335)
                      +|+||||++| +|.+++..    ...+++..++.++.||+.||.|||++++            + .....+..       
T Consensus        76 ~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            9999999995 99888876    5679999999999999999999999981            0 00000111       


Q ss_pred             ----------cCCCC---HHHhhhhCCCC--CCC------------CCCCCCCC---------ccccccccCCChHHHHH
Q 019844          214 ----------LGTPT---REEIKCMNPNY--TEF------------KFPQIKPH---------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       214 ----------~g~~~---~~~~~~~~~~~--~~~------------~~~~~~~~---------~~~~~~~~~~s~~~~~l  257 (335)
                                +|++.   ++.+.......  .-|            ..+.....         .....++..+++++.+|
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l  231 (324)
T cd05587         152 IFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSI  231 (324)
T ss_pred             CCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence                      12222   11111000000  000            00000000         00112345789999999


Q ss_pred             HHHhccCCCCCCCCH-----HHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCTA-----LEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t~-----~~~L~hp~f~~~~~  286 (335)
                      |.+||..||.+|+++     .++++||||....+
T Consensus       232 i~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         232 CKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            999999999999986     89999999988654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.94  E-value=3.4e-25  Score=196.00  Aligned_cols=121  Identities=26%  Similarity=0.414  Sum_probs=102.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+....      ..+.+|+.+++.+. ||||+++++++..........+
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            5999999999999999999999999999999886422      34678999999995 6999999999865443344558


Q ss_pred             EEEeecchhhHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRI-HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++++|.+++...... ...+++..++.++.||+.||.|||+++
T Consensus        82 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~  130 (295)
T cd07837          82 YLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG  130 (295)
T ss_pred             EEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            899999999998888764322 346899999999999999999999998

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.94  E-value=1.9e-25  Score=196.80  Aligned_cols=196  Identities=23%  Similarity=0.313  Sum_probs=139.4

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      |++.+.||+|+||.||+|.++.+++.||+|.+.+..       ..+.+|+.+++.++|+||+.+++.+     ....++|
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~   76 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAY-----ETKDALC   76 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEE-----ecCCEEE
Confidence            788999999999999999999999999999986421       2356799999999999999999998     5556799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh----------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK----------  212 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~----------  212 (335)
                      +||||+.| +|.+++....  ...+++..+..++.|++.||.|||+.++            +. ....+.          
T Consensus        77 lv~e~~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05630          77 LVLTLMNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  154 (285)
T ss_pred             EEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCC
Confidence            99999986 9998886532  3469999999999999999999999881            00 000000          


Q ss_pred             ------hcCCCC---HHHhhhhCCCCC----------------CCCCCCCCC-----------CccccccccCCChHHHH
Q 019844          213 ------VLGTPT---REEIKCMNPNYT----------------EFKFPQIKP-----------HPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       213 ------~~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~-----------~~~~~~~~~~~s~~~~~  256 (335)
                            ..|++.   ++.+........                ...+.....           ......++..+++++.+
T Consensus       155 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd05630         155 GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARS  234 (285)
T ss_pred             CccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHH
Confidence                  112221   111110000000                000000000           00112234568899999


Q ss_pred             HHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ||++||+.||.+|+|     +.++++||||.+...
T Consensus       235 li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05630         235 LCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINF  269 (285)
T ss_pred             HHHHHhhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence            999999999999999     999999999987543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.94  E-value=2.9e-25  Score=198.58  Aligned_cols=114  Identities=25%  Similarity=0.434  Sum_probs=94.7

Q ss_pred             eeeeeccCceEEEEEEEc--CCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           87 EHVVGTGSFGVVFQAKCR--ETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      +++||+|+||+||+|+++  .+++.||+|.+...  .....+|+.+|+.++||||++++++|..   ....++|+||||+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~~   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFDYA   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEecc
Confidence            568999999999999975  46789999998653  2456799999999999999999999854   2345689999999


Q ss_pred             hhhHHHHHHHHhh-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PETVNRIARNYSR-----IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g~L~~~l~~~~~-----~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++|..++.....     ....+++..++.++.||+.||.|||+++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  128 (317)
T cd07868          83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999888764321     1235899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.93  E-value=2.5e-25  Score=202.76  Aligned_cols=112  Identities=21%  Similarity=0.336  Sum_probs=101.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||+||+|.++.+++.||||++.+..       ..+.+|+.++..++||||+++++++     .+..++
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~~   76 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLNL   76 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCeE
Confidence            5999999999999999999999999999999996421       3467899999999999999999999     666679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.++.||+.||+|||++|
T Consensus        77 ~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~g  121 (363)
T cd05628          77 YLIMEFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQLG  121 (363)
T ss_pred             EEEEcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999996 99999876    577999999999999999999999998

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=2.3e-25  Score=196.03  Aligned_cols=114  Identities=32%  Similarity=0.574  Sum_probs=100.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||.|+||.||+|+++.+++.||||.+..+.      ..+.+|+.++++++||||+++++++     .+..+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence            3899999999999999999999999999999886422      3567899999999999999999998     5556689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|..++....  ...+++..++.++.||+.||+|||+.+
T Consensus        76 ~v~e~~~~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (284)
T cd07860          76 LVFEFLHQDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSHR  120 (284)
T ss_pred             EEeeccccCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999888888876532  456899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=2e-24  Score=203.13  Aligned_cols=115  Identities=21%  Similarity=0.237  Sum_probs=96.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCC------CceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDH------PNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~h------pnIv~~~~~~~~~~~~~  151 (335)
                      ..+|+++++||+|+||+||+|.+..+++.||||+++..   ......|+.+++.+.|      .+|++++++|.    ..
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~----~~  203 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ----NE  203 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE----cC
Confidence            36799999999999999999999999999999999642   2345678888887755      45889988884    23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      ..++|||||++.++|.+++..    .+.+++..++.|+.||+.||+|||++ +
T Consensus       204 ~~~~~iv~~~~g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~g  252 (467)
T PTZ00284        204 TGHMCIVMPKYGPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELH  252 (467)
T ss_pred             CceEEEEEeccCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            356899999998888888875    56799999999999999999999974 6

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.93  E-value=2.6e-25  Score=200.16  Aligned_cols=195  Identities=25%  Similarity=0.361  Sum_probs=139.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc--------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD--------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      +|++++.||+|+||.||+|++.   .+++.||+|++.+.        ...+.+|+.+++.+ +||||+++++++     .
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~   75 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q   75 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence            4899999999999999999874   47899999998642        13456899999999 599999999998     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HH--------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LV--------  208 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~--------  208 (335)
                      ...++|+||||+.| +|.+++..    +..+++..++.++.||+.||.|||+++            ++. ..        
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~  151 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGL  151 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcC
Confidence            66679999999996 99988876    567999999999999999999999998            000 00        


Q ss_pred             ----------hHhhhcCCCC---HHHhhhhC---CCCCCCCCCC------CCCCcc-------------------ccccc
Q 019844          209 ----------EIIKVLGTPT---REEIKCMN---PNYTEFKFPQ------IKPHPW-------------------HKVFQ  247 (335)
Q Consensus       209 ----------~~~~~~g~~~---~~~~~~~~---~~~~~~~~~~------~~~~~~-------------------~~~~~  247 (335)
                                .....+|++.   ++.+....   ....-|.+.-      ....+|                   ...++
T Consensus       152 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  231 (332)
T cd05614         152 SKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFP  231 (332)
T ss_pred             CccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence                      0011223333   22221100   0000000000      000011                   11234


Q ss_pred             cCCChHHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          248 KRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      ..+++.+.+||.+||+.||++||     ++.++++||||+...+
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         232 SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            56889999999999999999999     8899999999987643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.93  E-value=8.5e-25  Score=196.44  Aligned_cols=226  Identities=27%  Similarity=0.463  Sum_probs=156.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|.+.+.||.|+||.||+|.+..+++.||||++.+.      .+.+.+|+.+++.++||||++++++|..    ...
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~   83 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS----PLE   83 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----CCC
Confidence            456799999999999999999999999999999987532      2456789999999999999999999843    233


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC------------h-HHhHhhhcC-----
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD------------Q-LVEIIKVLG-----  215 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~------------~-~~~~~~~~g-----  215 (335)
                      .+|+||||++++|.+++.     ...+++..+..++.||+.||.|||++++-            . ....+..+|     
T Consensus        84 ~~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          84 DIYFVTELLGTDLHRLLT-----SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             cEEEEeehhccCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            588999999889988876     34689999999999999999999999810            0 000000111     


Q ss_pred             ---------CCC---HHHhh----------------------hhCCCCCCCC----------------------------
Q 019844          216 ---------TPT---REEIK----------------------CMNPNYTEFK----------------------------  233 (335)
Q Consensus       216 ---------~~~---~~~~~----------------------~~~~~~~~~~----------------------------  233 (335)
                               ++.   ++.+.                      .+.+.+....                            
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (328)
T cd07856         159 DPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT  238 (328)
T ss_pred             CCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence                     100   11000                      0001110000                            


Q ss_pred             ------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCccc
Q 019844          234 ------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPE  307 (335)
Q Consensus       234 ------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (335)
                            .+.....++...+ +.+++++.++|++||+.||++|||+.+++.||||.....|......    ...|++. ..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~~----~~~~~~~-~~  312 (328)
T cd07856         239 LRFVQSLPKREPVPFSEKF-KNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVA----EEKFDWS-FN  312 (328)
T ss_pred             HHHHhhccccCCCcHHHHc-CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccCc----hhhcCCc-hh
Confidence                  0000000111111 3578899999999999999999999999999999998877655332    2245555 55


Q ss_pred             CCCCCHHHHhhcC
Q 019844          308 LSGIPPETINRLI  320 (335)
Q Consensus       308 ~~~~~~~~~~~~~  320 (335)
                      ..+++.+.|+-.+
T Consensus       313 ~~~~~~~~~~~~~  325 (328)
T cd07856         313 DADLPVDTWKVMM  325 (328)
T ss_pred             cccCCHHHHHHHh
Confidence            7788888887543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4e-25  Score=198.82  Aligned_cols=113  Identities=23%  Similarity=0.352  Sum_probs=100.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++|+||++++++|     ....++
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~   76 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENNL   76 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCeE
Confidence            599999999999999999999999999999998642       23467899999999999999999999     566679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.| +|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        77 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (331)
T cd05597          77 YLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQLG  122 (331)
T ss_pred             EEEEecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999986 999998652   456999999999999999999999998

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.93  E-value=1.8e-25  Score=200.84  Aligned_cols=111  Identities=23%  Similarity=0.374  Sum_probs=96.0

Q ss_pred             Eeeeeecc--CceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           86 AEHVVGTG--SFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        86 ~~~~lG~G--~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ++++||+|  +||+||++.++.+|+.||+|++....      ..+.+|+.+++.++||||++++++|     .....+|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~-----~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATF-----IADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----EECCEEEE
Confidence            56789999  78899999999999999999996431      3466899999999999999999999     44556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+++ +|.+++....  ...+++..++.++.||+.||+|||+++
T Consensus        77 v~e~~~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~  121 (327)
T cd08227          77 VTSFMAYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHMG  121 (327)
T ss_pred             EEeccCCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999995 9999987533  345899999999999999999999988

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=1.6e-25  Score=201.50  Aligned_cols=113  Identities=20%  Similarity=0.349  Sum_probs=100.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|++.+.||.|+||.||+|.+..++..+|+|.+....     ..+.+|+.+++.++||||++++++|     ....++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   78 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGEI   78 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEE-----EECCEE
Confidence            356999999999999999999999999999999886432     3477999999999999999999999     445569


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      |+||||+.| +|.+++..    .+.+++..++.++.||+.||.|||+.
T Consensus        79 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~  122 (333)
T cd06650          79 SICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREK  122 (333)
T ss_pred             EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            999999986 99999876    56789999999999999999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=1.7e-25  Score=199.93  Aligned_cols=188  Identities=25%  Similarity=0.371  Sum_probs=133.3

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|++..+++.||||++.+..       .....|..++..+ +||||+++++++     ....++|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF-----QTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE-----EeCCEEEEEE
Confidence            46999999999999999999999999996531       3345678888765 899999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV------------  213 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~------------  213 (335)
                      ||++| +|.+++..    ...+++..+..++.||+.||.|||++++            +. ....+..            
T Consensus        76 ey~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  151 (316)
T cd05619          76 EYLNGGDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA  151 (316)
T ss_pred             eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC
Confidence            99985 99988875    5679999999999999999999999981            00 0000111            


Q ss_pred             -----cCCCC---HHHhhhhCCCCCC------------------CCCCCCCCC-------ccccccccCCChHHHHHHHH
Q 019844          214 -----LGTPT---REEIKCMNPNYTE------------------FKFPQIKPH-------PWHKVFQKRLPPEAVDLVCR  260 (335)
Q Consensus       214 -----~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~~~~~li~~  260 (335)
                           .|++.   ++.+...  .|..                  ..+......       .....++..++.++.+||.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  229 (316)
T cd05619         152 KTCTFCGTPDYIAPEILLGQ--KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVK  229 (316)
T ss_pred             ceeeecCCccccCHHHHcCC--CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHH
Confidence                 12222   1111100  0000                  000000000       00112345678999999999


Q ss_pred             hccCCCCCCCCHH-HHhcCcccccCCC
Q 019844          261 FFQYSPNLRCTAL-EACVHPFFDELRD  286 (335)
Q Consensus       261 ~L~~dP~~R~t~~-~~L~hp~f~~~~~  286 (335)
                      ||+.||.+|+++. ++++||||....+
T Consensus       230 ~l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05619         230 LFVREPERRLGVKGDIRQHPFFREIDW  256 (316)
T ss_pred             HhccCHhhcCCChHHHHcCcccCCCCH
Confidence            9999999999996 9999999988754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.93  E-value=3.8e-25  Score=201.85  Aligned_cols=114  Identities=25%  Similarity=0.424  Sum_probs=100.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~  115 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD  115 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence            345699999999999999999999999999999999642       13356899999999999999999999     666


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++|+|||||+| +|.+++..     ..+++..+..++.||+.||.|||+++
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~  162 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            679999999985 99998864     45899999999999999999999998

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=1.9e-25  Score=199.62  Aligned_cols=190  Identities=22%  Similarity=0.352  Sum_probs=133.5

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|+++.+|+.||+|++++..       .....|..++..+ +||||+++++++     ....++|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence            47999999999999999999999999996431       3355788888765 899999999999     5666799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhhc-----------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKVL-----------  214 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~~-----------  214 (335)
                      ||+.| +|..++..    ...+++..+..++.||+.||+|||++++            +. ....+..+           
T Consensus        76 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  151 (316)
T cd05620          76 EFLNGGDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN  151 (316)
T ss_pred             CCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC
Confidence            99996 99888875    5679999999999999999999999980            00 00011112           


Q ss_pred             ------CCCC---HHHhhhhCCCC--CCC--------------CCCCCCCC-------ccccccccCCChHHHHHHHHhc
Q 019844          215 ------GTPT---REEIKCMNPNY--TEF--------------KFPQIKPH-------PWHKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       215 ------g~~~---~~~~~~~~~~~--~~~--------------~~~~~~~~-------~~~~~~~~~~s~~~~~li~~~L  262 (335)
                            |++.   ++.+.......  .-|              .+......       .....++..++.++++||++||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  231 (316)
T cd05620         152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLF  231 (316)
T ss_pred             ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc
Confidence                  2222   11111000000  000              00000000       0011234567899999999999


Q ss_pred             cCCCCCCCCH-HHHhcCcccccCCC
Q 019844          263 QYSPNLRCTA-LEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~-~~~L~hp~f~~~~~  286 (335)
                      +.||++|+++ +++++||||....+
T Consensus       232 ~~dP~~R~~~~~~~~~h~~f~~~~~  256 (316)
T cd05620         232 ERDPTRRLGVVGNIRGHPFFKTINW  256 (316)
T ss_pred             cCCHHHcCCChHHHHcCCCcCCCCH
Confidence            9999999997 58999999988654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=3.7e-25  Score=198.41  Aligned_cols=191  Identities=26%  Similarity=0.332  Sum_probs=134.3

Q ss_pred             eeeeeccCceEEEEEEEc---CCCcEEEEEEecccc--------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           87 EHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~--------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++.||+|+||.||+|++.   .+++.||+|++.+..        ..+.+|+.+|+.++||||++++++|     ....++
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~   75 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKL   75 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeE
Confidence            368999999999999874   578899999986421        2356899999999999999999999     555669


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhhcCCCCH--
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKVLGTPTR--  219 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~~g~~~~--  219 (335)
                      |+||||+.| +|.+++..    .+.+++..++.++.||+.||.|||++++            +. ....+..+|....  
T Consensus        76 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  151 (323)
T cd05584          76 YLILEYLSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESI  151 (323)
T ss_pred             EEEEeCCCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecc
Confidence            999999996 99988876    5678999999999999999999999981            00 0001111221100  


Q ss_pred             -----HHhhhhCCCCCCCCC-----CCCCCCcc-------------------------------ccccccCCChHHHHHH
Q 019844          220 -----EEIKCMNPNYTEFKF-----PQIKPHPW-------------------------------HKVFQKRLPPEAVDLV  258 (335)
Q Consensus       220 -----~~~~~~~~~~~~~~~-----~~~~~~~~-------------------------------~~~~~~~~s~~~~~li  258 (335)
                           .....+.+.|.+.+.     .....+.|                               ...++..+++++.+||
T Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  231 (323)
T cd05584         152 HEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLL  231 (323)
T ss_pred             cCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence                 000011111111100     00001111                               0123456789999999


Q ss_pred             HHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .+||+.||++||     ++.++++||||....+
T Consensus       232 ~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~  264 (323)
T cd05584         232 KKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNW  264 (323)
T ss_pred             HHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            999999999999     8999999999987543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.93  E-value=3.8e-25  Score=195.30  Aligned_cols=195  Identities=27%  Similarity=0.387  Sum_probs=141.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||++.+..+++.||+|++.+.       ...+.+|+++++.++||||+++++++     ....++
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   76 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSNL   76 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCeE
Confidence            599999999999999999999999999999998642       24467899999999999999999999     555669


Q ss_pred             EEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--HHhH----------
Q 019844          156 NLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--LVEI----------  210 (335)
Q Consensus       156 ~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--~~~~----------  210 (335)
                      |+||||++ ++|.+++..    .+.+++..+..++.||+.||.|||++++            +.  ...+          
T Consensus        77 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  152 (290)
T cd05580          77 YLVMEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK  152 (290)
T ss_pred             EEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence            99999997 499999876    5679999999999999999999999881            00  0000          


Q ss_pred             ---hhhcCCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-------ccccccccCCChHHHHHHHHh
Q 019844          211 ---IKVLGTPT---REEIKCMNPNYT----------------EFKFPQIKPH-------PWHKVFQKRLPPEAVDLVCRF  261 (335)
Q Consensus       211 ---~~~~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~s~~~~~li~~~  261 (335)
                         ....|++.   ++.+........                ...+......       .....++..+++.++++|.+|
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  232 (290)
T cd05580         153 GRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNL  232 (290)
T ss_pred             CCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHH
Confidence               00112211   111110000000                0000000000       001123456789999999999


Q ss_pred             ccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          262 FQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       262 L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      |..||.+|+     +++++++||||..+.+
T Consensus       233 l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  262 (290)
T cd05580         233 LQVDLTKRLGNLKNGVNDIKNHPWFAGIDW  262 (290)
T ss_pred             ccCCHHHccCcccCCHHHHHcCcccccCCH
Confidence            999999999     8999999999998765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=2.1e-25  Score=199.88  Aligned_cols=190  Identities=27%  Similarity=0.391  Sum_probs=134.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|+++.+++.||||++.+..       .....|+.++..+ +||||++++++|     ....++|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence            46999999999999999999999999986531       2355788888876 799999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh-------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK-------------  212 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~-------------  212 (335)
                      ||++| +|...+..    ...+++..++.++.||+.||.|||++++            +. ....+.             
T Consensus        76 E~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~  151 (321)
T cd05591          76 EYVNGGDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV  151 (321)
T ss_pred             eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc
Confidence            99996 99888875    5679999999999999999999999981            00 000011             


Q ss_pred             ----hcCCCC---HHHhhhhCCC--CCCCCCCC------CCCCccc---------------cccccCCChHHHHHHHHhc
Q 019844          213 ----VLGTPT---REEIKCMNPN--YTEFKFPQ------IKPHPWH---------------KVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       213 ----~~g~~~---~~~~~~~~~~--~~~~~~~~------~~~~~~~---------------~~~~~~~s~~~~~li~~~L  262 (335)
                          ..|++.   ++.+......  ..-|.+.-      ....+|.               ..++..+++++.+||.+||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L  231 (321)
T cd05591         152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFM  231 (321)
T ss_pred             cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence                112222   1111110000  00000000      0000110               1234457899999999999


Q ss_pred             cCCCCCCC-------CHHHHhcCcccccCCC
Q 019844          263 QYSPNLRC-------TALEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~-------t~~~~L~hp~f~~~~~  286 (335)
                      +.||++|+       ++.++++||||....+
T Consensus       232 ~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~  262 (321)
T cd05591         232 TKNPNKRLGCVASQGGEDAIKQHPFFKEIDW  262 (321)
T ss_pred             ccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence            99999999       8999999999987654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=2.4e-25  Score=200.14  Aligned_cols=190  Identities=24%  Similarity=0.396  Sum_probs=134.8

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.++.+++.||+|++.+..       ..+.+|+.++..+ +||||+++++++     ....++|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence            46999999999999999999999999997431       3456888888777 899999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--hHHh---------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--QLVE---------------  209 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--~~~~---------------  209 (335)
                      ||++| +|..++..    .+.+++..++.|+.||+.||.|||++++            +  ....               
T Consensus        76 E~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~  151 (329)
T cd05618          76 EYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  151 (329)
T ss_pred             eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC
Confidence            99996 99887765    5679999999999999999999999980            0  0000               


Q ss_pred             -HhhhcCCCC---HHHhhhhCCC------------------CCCCCCCCCCCC--------------ccccccccCCChH
Q 019844          210 -IIKVLGTPT---REEIKCMNPN------------------YTEFKFPQIKPH--------------PWHKVFQKRLPPE  253 (335)
Q Consensus       210 -~~~~~g~~~---~~~~~~~~~~------------------~~~~~~~~~~~~--------------~~~~~~~~~~s~~  253 (335)
                       ....+|++.   ++.+......                  ..++........              .-...+|..++.+
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~  231 (329)
T cd05618         152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK  231 (329)
T ss_pred             ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHH
Confidence             011223332   2221111000                  000000000000              0011245678899


Q ss_pred             HHHHHHHhccCCCCCCCC------HHHHhcCcccccCCC
Q 019844          254 AVDLVCRFFQYSPNLRCT------ALEACVHPFFDELRD  286 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t------~~~~L~hp~f~~~~~  286 (335)
                      +.+||.+||+.||++|++      +.++++||||+...+
T Consensus       232 ~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         232 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             HHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            999999999999999998      589999999987654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=2.8e-25  Score=199.25  Aligned_cols=190  Identities=25%  Similarity=0.349  Sum_probs=131.3

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHH-HHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQ-IMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~-~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||+||+|+++.+|+.||||++.+..       ..+.+|.. +++.++||||+++++++     .....+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence            47999999999999999999999999996421       22344544 56788999999999999     5556689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV------------  213 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~------------  213 (335)
                      ||+.| +|..++..    .+.+++..++.++.||+.||.|||++++            + .....+..            
T Consensus        76 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~  151 (323)
T cd05575          76 DYVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK  151 (323)
T ss_pred             cCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC
Confidence            99996 99888875    5679999999999999999999999980            0 00000111            


Q ss_pred             -----cCCCC---HHHhhhhCCC--CCCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhc
Q 019844          214 -----LGTPT---REEIKCMNPN--YTEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       214 -----~g~~~---~~~~~~~~~~--~~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L  262 (335)
                           +|++.   ++.+......  ..-|.+.-      ....+|               ...+++.+++++.+||++||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l  231 (323)
T cd05575         152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLL  231 (323)
T ss_pred             ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence                 22222   1111100000  00000000      000000               01133567999999999999


Q ss_pred             cCCCCCCCCH----HHHhcCcccccCCC
Q 019844          263 QYSPNLRCTA----LEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~----~~~L~hp~f~~~~~  286 (335)
                      +.||.+||++    .++++||||....+
T Consensus       232 ~~~p~~R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         232 QKDRTKRLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             hcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            9999999987    69999999987654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.5e-24  Score=191.61  Aligned_cols=122  Identities=20%  Similarity=0.271  Sum_probs=105.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCC-----C---CceeeeceeeeeC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLD-----H---PNIVALKHCFFST  147 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~-----h---pnIv~~~~~~~~~  147 (335)
                      -...||.+.++||-|-|++||+|.|..+.+.||+|+++...   +....||.+|+++.     |   ..||+|++.|--.
T Consensus        75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            34468999999999999999999999999999999987543   44678999999982     3   4799999998543


Q ss_pred             CCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          148 TDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      . .+..++|+|+|+++.+|..+|....  .+.++...|+.|++||+.||.|||..-
T Consensus       155 G-pNG~HVCMVfEvLGdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~ec  207 (590)
T KOG1290|consen  155 G-PNGQHVCMVFEVLGDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHREC  207 (590)
T ss_pred             C-CCCcEEEEEehhhhhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence            3 6889999999999999999998765  678999999999999999999999765

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.93  E-value=7.7e-25  Score=197.90  Aligned_cols=118  Identities=28%  Similarity=0.429  Sum_probs=100.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC------
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK------  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~------  150 (335)
                      ..+|.+.+.||.|+||.||+|.++.+++.||+|.+...    .+.+.+|+.+++.++||||+++++++......      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            35799999999999999999999999999999998542    24467899999999999999999887543211      


Q ss_pred             ---CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 ---EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ---~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                         ...++|+||||++++|.+++.     ...+++..++.++.||+.||.|||+.|
T Consensus        84 ~~~~~~~~~lv~e~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~g  134 (342)
T cd07854          84 SLTELNSVYIVQEYMETDLANVLE-----QGPLSEEHARLFMYQLLRGLKYIHSAN  134 (342)
T ss_pred             cccccceEEEEeecccccHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               124688999999999888775     356999999999999999999999998

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=8.9e-25  Score=192.17  Aligned_cols=115  Identities=30%  Similarity=0.486  Sum_probs=100.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++.+.||.|++|.||+|++..+|..||||++...     ...+.+|+.+++.++||||+++++++     ....++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI-----HTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeE-----eeCCcEEE
Confidence            489999999999999999999999999999998643     23566899999999999999999999     44556899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++|+|.+++..... ...+++..+..++.||+.||.|||+++
T Consensus        76 v~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHENR  120 (284)
T ss_pred             EEecCCccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999888875331 346899999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=2.9e-25  Score=198.50  Aligned_cols=190  Identities=26%  Similarity=0.386  Sum_probs=131.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.+..+++.||||++++..       .....|..++..+ +||||+++++++     ....++|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence            46999999999999999999999999996432       2345677777654 899999999999     5566799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh-------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK-------------  212 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~-------------  212 (335)
                      ||++| +|..++..    .+.+++..++.|+.||+.||.|||++++            +. ....+.             
T Consensus        76 e~~~gg~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~  151 (316)
T cd05592          76 EYLNGGDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG  151 (316)
T ss_pred             cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC
Confidence            99986 99888876    5679999999999999999999999981            00 000011             


Q ss_pred             ----hcCCCCH---HHhhhhCCC--CCCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhc
Q 019844          213 ----VLGTPTR---EEIKCMNPN--YTEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       213 ----~~g~~~~---~~~~~~~~~--~~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L  262 (335)
                          .+|++.+   +.+......  ..-|.+.-      ....+|               ...++..+++++.+||.+||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l  231 (316)
T cd05592         152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLF  231 (316)
T ss_pred             ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHc
Confidence                1223221   111100000  00000000      000011               11234568899999999999


Q ss_pred             cCCCCCCCCH-HHHhcCcccccCCC
Q 019844          263 QYSPNLRCTA-LEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~-~~~L~hp~f~~~~~  286 (335)
                      +.||.+||++ .++++||||....+
T Consensus       232 ~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         232 ERDPTKRLGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             cCCHHHcCCChHHHHcCcccCCCCH
Confidence            9999999986 58889999987643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.8e-24  Score=195.74  Aligned_cols=233  Identities=24%  Similarity=0.315  Sum_probs=157.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++.+.      ...+.+|+.+++.++||||+++++++..... ...
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~   94 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   94 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence            446799999999999999999999999999999998643      2346689999999999999999998854321 123


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc--------------ChHHhHh-------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV--------------DQLVEII-------  211 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~--------------~~~~~~~-------  211 (335)
                      ..+|++++++.++|.+++..     ..+++..++.++.||+.||+|||++++              +....+.       
T Consensus        95 ~~~~lv~~~~~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~  169 (345)
T cd07877          95 NDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH  169 (345)
T ss_pred             ccEEEEehhcccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccc
Confidence            45789999998899887763     469999999999999999999999981              0000000       


Q ss_pred             ------hhcCCCC---HHHhhh----------------------hCCCCCCCC----------------------C----
Q 019844          212 ------KVLGTPT---REEIKC----------------------MNPNYTEFK----------------------F----  234 (335)
Q Consensus       212 ------~~~g~~~---~~~~~~----------------------~~~~~~~~~----------------------~----  234 (335)
                            ...|++.   ++.+..                      +.+.+....                      +    
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (345)
T cd07877         170 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  249 (345)
T ss_pred             ccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHh
Confidence                  0011111   111100                      001110000                      0    


Q ss_pred             --------CCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          235 --------PQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       235 --------~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                              +......+.. .....++++.+||.+||+.||.+||++.++|+||||+++..|.....     +..+++. .
T Consensus       250 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~-----~~~~~~~-~  322 (345)
T cd07877         250 ARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV-----ADPYDQS-F  322 (345)
T ss_pred             HHHHHHHhcccCCcchhh-hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCcccc-----CCCccCc-c
Confidence                    0000000000 01246888999999999999999999999999999999877665432     3334443 4


Q ss_pred             cCCCCCHHHHhhcChHHH
Q 019844          307 ELSGIPPETINRLIPEHA  324 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~  324 (335)
                      .+..+-.+.+.....+++
T Consensus       323 ~~~~~~~~~~~~~~~~~~  340 (345)
T cd07877         323 ESRDLLIDEWKSLTYDEV  340 (345)
T ss_pred             hhcccCHHHHHHHHHHHH
Confidence            455666677777666654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.93  E-value=6.4e-25  Score=194.12  Aligned_cols=116  Identities=30%  Similarity=0.456  Sum_probs=99.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.++...      ..+.+|+.+++.++||||+++++++...   +..++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~   81 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI   81 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence            45999999999999999999999999999999996322      2346899999999999999999998532   22568


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.++|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        82 ~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~  126 (293)
T cd07843          82 YMVMEYVEHDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDNW  126 (293)
T ss_pred             EEEehhcCcCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999998888752   235899999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.5e-24  Score=189.51  Aligned_cols=124  Identities=24%  Similarity=0.403  Sum_probs=106.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCC-CCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTD-KEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~-~~~~~  154 (335)
                      ..++|++.+.||+|+||.||+|.++.+++.+|+|++...   ...+.+|+.+++.+ +|+||+++++++..... ....+
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ   83 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence            346799999999999999999999989999999998643   24577899999999 79999999999965443 34566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||||+++ +|.+++.........+++..++.++.||+.||.|||+.+
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~  133 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK  133 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            8999999996 999988765434567999999999999999999999988

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.93  E-value=1.4e-24  Score=187.94  Aligned_cols=114  Identities=25%  Similarity=0.434  Sum_probs=99.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||++.+..+++.||+|.+...      ...+.+|+.+++.++||||+++++++     ....+.|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence            489999999999999999999999999999998532      23577899999999999999999998     5666799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.| +|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus        76 lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVHDRK  121 (256)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999986 9988887522  345899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.93  E-value=6.1e-25  Score=191.53  Aligned_cols=112  Identities=26%  Similarity=0.449  Sum_probs=100.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +|+.++.||+|+||.||++.+..+++.||+|++...          ...+.+|+.+++.++|+||+++++++     ...
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence            388899999999999999999999999999998642          24567899999999999999999999     555


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++||||+.| +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~~  123 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHENQ  123 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            668999999996 99999876    567899999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.93  E-value=3.1e-24  Score=199.70  Aligned_cols=114  Identities=20%  Similarity=0.210  Sum_probs=99.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ....|.+.+.||+|+||.||+|.+..+++.||||...  .....+|+.+|++|+|+|||++++++     ......|+||
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--~~~~~~E~~iL~~L~HpnIv~l~~~~-----~~~~~~~lv~  239 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--YASSVHEARLLRRLSHPAVLALLDVR-----VVGGLTCLVL  239 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--ccCHHHHHHHHHHCCCCCCCcEEEEE-----EECCEEEEEE
Confidence            3446999999999999999999999999999999643  23467899999999999999999998     4445688999


Q ss_pred             ecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |++.++|..++...   ...+++..++.|+.||+.||.|||+++
T Consensus       240 e~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~g  280 (461)
T PHA03211        240 PKYRSDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGEG  280 (461)
T ss_pred             EccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999998887652   346999999999999999999999998

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=1.6e-24  Score=195.34  Aligned_cols=115  Identities=31%  Similarity=0.417  Sum_probs=99.5

Q ss_pred             ceeeeEE-eeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------------hhHHHHHHHHHhCCCCceeee
Q 019844           80 QKVSYIA-EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------------RYKNRELQIMQMLDHPNIVAL  140 (335)
Q Consensus        80 ~~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------------~~~~~Ei~~l~~l~hpnIv~~  140 (335)
                      ..++|.. .+.||.|+||+||+|.++.+++.||||++....                  ..+.+|+.+++.++||||+++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            3456764 578999999999999999999999999985321                  135689999999999999999


Q ss_pred             ceeeeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ~~~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++     ....++|+||||+.|+|.+++..    ...+++..+..++.||+.||.|||+++
T Consensus        86 ~~~~-----~~~~~~~lv~e~~~~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~  139 (335)
T PTZ00024         86 VDVY-----VEGDFINLVMDIMASDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKWY  139 (335)
T ss_pred             eEEE-----ecCCcEEEEEeccccCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999     55567999999999999988875    567999999999999999999999988

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4e-25  Score=194.10  Aligned_cols=114  Identities=24%  Similarity=0.341  Sum_probs=100.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ++|++.+.||.|+||.||+|.+..++..+|+|.+...    ...+.+|+.+++.++||||+++++++     .....+|+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY-----FYENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----ecCCeEEE
Confidence            4699999999999999999999889999999998643    23567899999999999999999999     44556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++| +|.+++...   ...+++..++.++.|++.||.|||+++
T Consensus        80 v~e~~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~  123 (280)
T cd06611          80 LIEFCDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSHK  123 (280)
T ss_pred             EeeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996 998888752   356999999999999999999999988

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.93  E-value=7.7e-25  Score=195.07  Aligned_cols=111  Identities=21%  Similarity=0.330  Sum_probs=98.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++.+.||+|+||.||++.+..++..+|+|.+....     ..+.+|+++++.++||||+++++++     ....++|+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~l   76 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAF-----YSDGEISI   76 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCCEEEE
Confidence            5999999999999999999999999999999986432     3467899999999999999999999     45566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      ||||++| +|.+++..    .+.+++..+..++.||+.||.|||+.
T Consensus        77 v~ey~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~  118 (308)
T cd06615          77 CMEHMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREK  118 (308)
T ss_pred             EeeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            9999996 99999876    56799999999999999999999974

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=8.9e-25  Score=195.95  Aligned_cols=195  Identities=24%  Similarity=0.312  Sum_probs=138.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +|.+.+.||+|+||.||+|+++.+++.||+|++.+..       .....|..++..+ +|++|+++++++     ....+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence            4889999999999999999999999999999987532       2345678888777 589999999998     55567


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhh--------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIK--------  212 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~--------  212 (335)
                      +|+||||++| +|.+.+..    .+.+++..+..++.||+.||.|||++++            + .....+.        
T Consensus        76 ~~lv~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            9999999985 99888875    5679999999999999999999999880            0 0000011        


Q ss_pred             ---------hcCCCC---HHHhhhhCCCC--CCCCCCC------CCCCcc---------------ccccccCCChHHHHH
Q 019844          213 ---------VLGTPT---REEIKCMNPNY--TEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDL  257 (335)
Q Consensus       213 ---------~~g~~~---~~~~~~~~~~~--~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~l  257 (335)
                               .+|++.   ++.+.......  .-|.+.-      ....+|               ...++..+++++.+|
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  231 (323)
T cd05616         152 MWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAI  231 (323)
T ss_pred             CCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence                     122322   11111100000  0000000      000000               012345789999999


Q ss_pred             HHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+|++     ..++++||||+...+
T Consensus       232 i~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         232 CKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             HHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence            99999999999998     489999999988764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.4e-26  Score=192.79  Aligned_cols=196  Identities=23%  Similarity=0.343  Sum_probs=150.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|..+++||+|.||+|-+|+.+.+++.||+|+++++.       .....|-++|+..+||.+..+...|     +....
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF-----Qt~dr  242 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF-----QTQDR  242 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-----ccCce
Confidence            57999999999999999999999999999999998653       2345788999999999999999999     77777


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      +|+||||+.| .|+-.+..    ...|+|..+++|..+|+.||.|||+++                              
T Consensus       243 lCFVMeyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  243 LCFVMEYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             EEEEEEEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence            9999999996 88877765    677999999999999999999999988                              


Q ss_pred             cChHHhHhhhcCCCCHHHhhhhCC-CCCC-----------C-----CCCCCCCC--cc-------ccccccCCChHHHHH
Q 019844          204 VDQLVEIIKVLGTPTREEIKCMNP-NYTE-----------F-----KFPQIKPH--PW-------HKVFQKRLPPEAVDL  257 (335)
Q Consensus       204 ~~~~~~~~~~~g~~~~~~~~~~~~-~~~~-----------~-----~~~~~~~~--~~-------~~~~~~~~s~~~~~l  257 (335)
                      +.......++||||.+........ .|..           |     .+|.....  .+       ...||..++++++.|
T Consensus       319 I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktL  398 (516)
T KOG0690|consen  319 IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTL  398 (516)
T ss_pred             ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHH
Confidence            111122335677776432221110 0100           0     11111111  11       123678999999999


Q ss_pred             HHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +..+|..||.+|..     |.++.+|+||..+.|
T Consensus       399 LsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W  432 (516)
T KOG0690|consen  399 LSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW  432 (516)
T ss_pred             HHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence            99999999999995     789999999999877

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=1.8e-24  Score=190.55  Aligned_cols=125  Identities=22%  Similarity=0.316  Sum_probs=106.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++...   ...+.+|+.+++.+ +||||+++++++.........+
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~   94 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQ   94 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCe
Confidence            3456799999999999999999999999999999988642   24567899999999 7999999999986544445567


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++||||++| +|.+++.........+++..++.++.|++.||.|||+++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  144 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK  144 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            8999999996 999988754434567899999999999999999999887

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-25  Score=201.45  Aligned_cols=187  Identities=23%  Similarity=0.247  Sum_probs=137.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc---cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ---DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ..+.+++.||+|.||.||.|.+. ....||+|.++.   ....+.+|+++|++|+|+|||++|+++.     .+.-+|||
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~-----~~~piyIV  279 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCT-----KQEPIYIV  279 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEe-----cCCceEEE
Confidence            34566899999999999999995 334799999864   2366789999999999999999999994     33359999


Q ss_pred             eecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------cChHHhHhhhcCCCCH-----
Q 019844          159 LEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------VDQLVEIIKVLGTPTR-----  219 (335)
Q Consensus       159 ~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------~~~~~~~~~~~g~~~~-----  219 (335)
                      ||||. |+|.++|+..  .+..+...+...++.|||+||+||++++             .+.+...+..+|-...     
T Consensus       280 tE~m~~GsLl~yLr~~--~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~  357 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTR--EGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE  357 (468)
T ss_pred             EEecccCcHHHHhhhc--CCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence            99999 7999999872  2677999999999999999999999998             1122222333443221     


Q ss_pred             --------HHhhhhCCCCCCCCCCCCCCCccc---------------------------------cccccCCChHHHHHH
Q 019844          220 --------EEIKCMNPNYTEFKFPQIKPHPWH---------------------------------KVFQKRLPPEAVDLV  258 (335)
Q Consensus       220 --------~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~s~~~~~li  258 (335)
                              -.+.+.+|+...+....++.+.|+                                 ...|..+|+++.+++
T Consensus       358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM  437 (468)
T KOG0197|consen  358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELM  437 (468)
T ss_pred             eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHH
Confidence                    112222232222222222223322                                 234678999999999


Q ss_pred             HHhccCCCCCCCCHHHHh
Q 019844          259 CRFFQYSPNLRCTALEAC  276 (335)
Q Consensus       259 ~~~L~~dP~~R~t~~~~L  276 (335)
                      ..||..+|++|||++.+.
T Consensus       438 ~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  438 KSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHhhCCcccCCCHHHHH
Confidence            999999999999998654

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.93  E-value=1.8e-24  Score=187.24  Aligned_cols=114  Identities=27%  Similarity=0.441  Sum_probs=100.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...      ...+.+|+.+++.++||||+++++.+     .....++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence            489999999999999999999999999999998642      23567899999999999999999998     4556689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++....  ...+++..+..++.|++.||.|||+++
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~  121 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTKL  121 (256)
T ss_pred             EEEecCCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 9999987632  345899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.93  E-value=1.6e-24  Score=190.85  Aligned_cols=196  Identities=22%  Similarity=0.259  Sum_probs=139.0

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      |+..+.||+|+||+||+|.+..+++.||+|.+.+..       ..+.+|+.+|+.++|+||+.+++++     ..+..+|
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~   76 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence            788899999999999999999999999999986421       2356899999999999999999998     5556799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-------------ChHHhHhhhcC-------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-------------DQLVEIIKVLG-------  215 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-------------~~~~~~~~~~g-------  215 (335)
                      +||||+.| +|.+++....  ...+++..+..++.|++.||.|||++++             ......+..+|       
T Consensus        77 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05632          77 LVLTIMNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPE  154 (285)
T ss_pred             EEEEeccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCC
Confidence            99999996 8988776532  3469999999999999999999999981             00000011112       


Q ss_pred             ---------CCC---HHHhhhhCCCC--C--------------CCCCCCCCC-----------CccccccccCCChHHHH
Q 019844          216 ---------TPT---REEIKCMNPNY--T--------------EFKFPQIKP-----------HPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       216 ---------~~~---~~~~~~~~~~~--~--------------~~~~~~~~~-----------~~~~~~~~~~~s~~~~~  256 (335)
                               +..   ++.+.......  .              ...+.....           ......++..+++++.+
T Consensus       155 ~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd05632         155 GESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKS  234 (285)
T ss_pred             CCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHH
Confidence                     111   11110000000  0              000000000           00011234568899999


Q ss_pred             HHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ||.+||+.||++||+     +.++++|+||.....
T Consensus       235 li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         235 ICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             HHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence            999999999999999     899999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=1.1e-24  Score=205.03  Aligned_cols=199  Identities=23%  Similarity=0.262  Sum_probs=140.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCC-CcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRET-GEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...|.+.+.||+|+||.||+|.+..+ +..||+|.+....    ..+.+|+.+|+.++|||||++++++     ....++
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~-----~~~~~~  140 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDF-----KSDDKL  140 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----EECCEE
Confidence            34599999999999999999998877 7889999875322    3467899999999999999999999     555669


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--hHHh-----------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--QLVE-----------  209 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--~~~~-----------  209 (335)
                      ||||||++| +|.+++.........+++..+..++.||+.||.|||++++            +  ...+           
T Consensus       141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~  220 (478)
T PTZ00267        141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS  220 (478)
T ss_pred             EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence            999999985 9999887654445679999999999999999999999880            0  0000           


Q ss_pred             -------HhhhcCCCCHHHhhhhC-CCCCC----C------------CCCCCCCCc----------cccccccCCChHHH
Q 019844          210 -------IIKVLGTPTREEIKCMN-PNYTE----F------------KFPQIKPHP----------WHKVFQKRLPPEAV  255 (335)
Q Consensus       210 -------~~~~~g~~~~~~~~~~~-~~~~~----~------------~~~~~~~~~----------~~~~~~~~~s~~~~  255 (335)
                             ....+|++.+....... ..|..    |            ..|......          -...++..+++++.
T Consensus       221 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  300 (478)
T PTZ00267        221 DSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMK  300 (478)
T ss_pred             CccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHH
Confidence                   01112333211110000 00000    0            000000000          00123356789999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +||.+||..||++||++.++|.|+|++..
T Consensus       301 ~li~~~L~~dP~~Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        301 ALLDPLLSKNPALRPTTQQLLHTEFLKYV  329 (478)
T ss_pred             HHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence            99999999999999999999999998653

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.93  E-value=1.6e-24  Score=190.43  Aligned_cols=116  Identities=22%  Similarity=0.327  Sum_probs=97.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHH-HHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQI-MQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~-l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||+|.++.+|+.||+|+++...     ..+..|+.+ ++.++||||+++++++.     ....+|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~~   76 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDVW   76 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcEE
Confidence            5999999999999999999999999999999986432     234456665 56679999999999994     444589


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      ++|||++|+|.+++.........+++..++.++.||+.||.|||++ +
T Consensus        77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~  124 (283)
T cd06617          77 ICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS  124 (283)
T ss_pred             EEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999999988876544456799999999999999999999987 5

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-26  Score=222.56  Aligned_cols=199  Identities=25%  Similarity=0.372  Sum_probs=153.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|.++++||+|+||.|.+++++.|++.||+|++++.       ...+..|..+|..-+.+.||+++.+|     ++.
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF-----QD~  147 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF-----QDE  147 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh-----cCc
Confidence            456799999999999999999999999999999999752       34577899999999999999999999     899


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------  203 (335)
                      .|+|+|||||+| ||..+|..    ..+++|..+++|+.+|+.||+-||+.|                            
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk----~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSK----FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL  223 (1317)
T ss_pred             cceEEEEecccCchHHHHHhh----cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH
Confidence            999999999996 99999987    447999999999999999999999999                            


Q ss_pred             ---cChHHhHhhhcCCCCHH---HhhhhCCC---CC------------------------CC---CCCCCCCCccccccc
Q 019844          204 ---VDQLVEIIKVLGTPTRE---EIKCMNPN---YT------------------------EF---KFPQIKPHPWHKVFQ  247 (335)
Q Consensus       204 ---~~~~~~~~~~~g~~~~~---~~~~~~~~---~~------------------------~~---~~~~~~~~~~~~~~~  247 (335)
                         .+..+.....+|||.|.   .+..+...   |.                        .-   .+..+....-...||
T Consensus       224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP  303 (1317)
T KOG0612|consen  224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP  303 (1317)
T ss_pred             hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC
Confidence               12222222346777633   22222111   11                        00   011111111111233


Q ss_pred             --cCCChHHHHHHHHhccCCCCCCCC---HHHHhcCcccccCCCCC
Q 019844          248 --KRLPPEAVDLVCRFFQYSPNLRCT---ALEACVHPFFDELRDPN  288 (335)
Q Consensus       248 --~~~s~~~~~li~~~L~~dP~~R~t---~~~~L~hp~f~~~~~~~  288 (335)
                        ..+|+++++||+++++ +|+.|..   ++++-+||||.++.|..
T Consensus       304 ~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~  348 (1317)
T KOG0612|consen  304 DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDN  348 (1317)
T ss_pred             cccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhh
Confidence              4689999999999997 8999998   99999999999998843

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=2.1e-24  Score=190.94  Aligned_cols=115  Identities=30%  Similarity=0.473  Sum_probs=99.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++.+.||+|+||.||+|.++.+++.||+|.+...      ...+.+|+.+++.++||||+++++++     ....++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVV-----HSEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEE-----ecCCeE
Confidence            3699999999999999999999999999999988542      13467899999999999999999999     555679


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++++|.+.+....  ...+++..++.++.||+.||+|||+++
T Consensus        77 ~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~  122 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSHR  122 (294)
T ss_pred             EEEEecccccHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999988888776522  234688899999999999999999988

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.93  E-value=3.6e-24  Score=188.82  Aligned_cols=118  Identities=21%  Similarity=0.348  Sum_probs=102.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|...+.||.|++|.||+|.+..+++.+|+|.+...     ...+.+|+++++.++||||++++++|..   .....+|+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~l   78 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIGI   78 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEEE
Confidence            599999999999999999999999999999998643     2357799999999999999999999843   23345889


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++| +|.+++.........+++..+..++.||+.||.|||+.+
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~  125 (287)
T cd06621          79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK  125 (287)
T ss_pred             EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996 999888765444567899999999999999999999988

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.93  E-value=5.2e-25  Score=196.14  Aligned_cols=196  Identities=27%  Similarity=0.409  Sum_probs=148.7

Q ss_pred             eEE--eeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           84 YIA--EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        84 y~~--~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      |++  -++||.|.||+||-|+++.+|+.||||+|.+      ....++.|+.||..++||.||.+-..|     +....+
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~erv  638 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERV  638 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceE
Confidence            555  4799999999999999999999999999964      235678999999999999999999999     555569


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------------  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------------  203 (335)
                      ++|||-+.||+...+-...  .+++++...++++.||+.||.|||.+|                                
T Consensus       639 FVVMEKl~GDMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi  716 (888)
T KOG4236|consen  639 FVVMEKLHGDMLEMILSSE--KGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARI  716 (888)
T ss_pred             EEEehhhcchHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceee
Confidence            9999999998777776544  688999999999999999999999998                                


Q ss_pred             cChHHhHhhhcCCCCHHHhhhh-CCCCCC----C------------CCCCCCCC-----------ccccccccCCChHHH
Q 019844          204 VDQLVEIIKVLGTPTREEIKCM-NPNYTE----F------------KFPQIKPH-----------PWHKVFQKRLPPEAV  255 (335)
Q Consensus       204 ~~~~~~~~~~~g~~~~~~~~~~-~~~~~~----~------------~~~~~~~~-----------~~~~~~~~~~s~~~~  255 (335)
                      +....---.++|||.|...... +.+|..    +            .||.....           .+...-|..+++++.
T Consensus       717 IgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~Ai  796 (888)
T KOG4236|consen  717 IGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAI  796 (888)
T ss_pred             cchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHH
Confidence            1111112245788874332211 111210    0            11111111           111222357899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |||..+|+..-.+|.+++..|.|||++++..
T Consensus       797 dlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~  827 (888)
T KOG4236|consen  797 DLINNLLQVKMRKRYSVDKSLSHPWLQDYQT  827 (888)
T ss_pred             HHHHHHHHHHHHHhcchHhhccchhhhcchH
Confidence            9999999999999999999999999988643

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=6.6e-25  Score=192.52  Aligned_cols=107  Identities=24%  Similarity=0.357  Sum_probs=92.2

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||+|+||.||++.++.+|+.||+|.+...       ......|+++++.++||||+++++++     ....++|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence            79999999999999999999999998532       12345799999999999999999999     5666799999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +| +|.+++....  ...+++..+..++.||+.||+|||+.+
T Consensus        76 ~g~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~  115 (277)
T cd05607          76 NGGDLKYHIYNVG--ERGLEMERVIHYSAQITCGILHLHSMD  115 (277)
T ss_pred             CCCCHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            86 9988876532  345899999999999999999999988

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.1e-24  Score=189.26  Aligned_cols=112  Identities=26%  Similarity=0.475  Sum_probs=99.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .|.+.+.||.|+||.||.|.+..+++.||+|.+...         ...+.+|+.+++.++||||+++++++     ....
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~   77 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDDE   77 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccCC
Confidence            499999999999999999999999999999998532         13467899999999999999999999     5555


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++| +|.+++..    .+.+++..++.++.||+.||.|||+.+
T Consensus        78 ~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~  124 (263)
T cd06625          78 TLSIFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSNM  124 (263)
T ss_pred             eEEEEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            79999999986 99998876    567899999999999999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.93  E-value=7.4e-24  Score=187.13  Aligned_cols=114  Identities=28%  Similarity=0.450  Sum_probs=98.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .+|.+.+.||+|+||.||+|.++.+++.||+|++....     ....+|+.+++.++|+||+++++++     ....+.|
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~~~   79 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKETLT   79 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCeEE
Confidence            46999999999999999999999999999999986432     2456899999999999999999998     4556689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|.+.+...   ...+++..++.++.||+.||.|||+.+
T Consensus        80 lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~  123 (291)
T cd07870          80 FVFEYMHTDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQH  123 (291)
T ss_pred             EEEecccCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999998877766542   345888999999999999999999988

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.92  E-value=2.5e-24  Score=187.49  Aligned_cols=111  Identities=26%  Similarity=0.479  Sum_probs=97.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +|++.+.||+|+||.||+|.. .+++.+|+|.+....          ..+.+|+++++.++|+||+++++++     ...
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTC-----LDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEe-----ecC
Confidence            488999999999999999987 588999999885321          3467899999999999999999999     555


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++|+||||++| +|.+++..    ...+++..++.++.|++.||.|||+.+
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~  122 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNNC  122 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            679999999986 99999876    567899999999999999999999988

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.92  E-value=4.1e-24  Score=192.39  Aligned_cols=116  Identities=29%  Similarity=0.375  Sum_probs=98.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCC--CcEEEEEEeccc------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRET--GEIVAIKKVLQD------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~--~~~vAvK~i~~~------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|++.+.||+|+||.||+|.+..+  +..||+|.+...      .+.+.+|+.+++.+ +||||+++++++.... ....
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence            489999999999999999999888  899999998642      23467899999999 5999999999764322 2334


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|++|||++++|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        80 ~~~~~~e~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g  125 (332)
T cd07857          80 ELYLYEELMEADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSAN  125 (332)
T ss_pred             cEEEEEecccCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5789999999999888865    567999999999999999999999998

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.92  E-value=1.6e-24  Score=189.41  Aligned_cols=121  Identities=21%  Similarity=0.349  Sum_probs=102.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCCC-CccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTDK-EELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~-~~~~~  155 (335)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|++...   ...+.+|+.+++.+ +||||+++++++...... ...++
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL   84 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence            34599999999999999999999999999999998643   34577899999998 799999999998654322 23568


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+++ +|.+++....  ...+++..++.++.|++.||.|||+++
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~  131 (272)
T cd06637          85 WLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHK  131 (272)
T ss_pred             EEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            899999996 9999887632  356899999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.92  E-value=2.6e-24  Score=189.37  Aligned_cols=113  Identities=35%  Similarity=0.614  Sum_probs=97.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++.+.||+|+||.||+|.++.+++.||+|++....      +.+.+|+.+++.++||||+++++++     ....++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVF-----RRKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEE-----eeCCEE
Confidence            36999999999999999999999999999999885321      3457899999999999999999999     555668


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||+++ .|..++..    ...+++..++.++.||+.||.|||+++
T Consensus        76 ~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~~  120 (286)
T cd07847          76 HLVFEYCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKHN  120 (286)
T ss_pred             EEEEeccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999997 66655543    456999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.92  E-value=1.2e-24  Score=195.03  Aligned_cols=195  Identities=24%  Similarity=0.292  Sum_probs=137.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +|.+.+.||+|+||.||+|+++.+++.||+|++.+..       .....|+.++..+. |++|+++++++     .....
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~   75 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR   75 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence            3788999999999999999999999999999986431       33567888998885 57888899988     55566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh-------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV-------  213 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~-------  213 (335)
                      +|+||||++| +|.+++..    .+.+++..++.|+.||+.||.|||++++            +. ....+..       
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence            9999999985 99888875    5679999999999999999999999880            00 0000111       


Q ss_pred             ----------cCCCC---HHHhhhhCCCC--CCC------------CCCCCCCCc---------cccccccCCChHHHHH
Q 019844          214 ----------LGTPT---REEIKCMNPNY--TEF------------KFPQIKPHP---------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       214 ----------~g~~~---~~~~~~~~~~~--~~~------------~~~~~~~~~---------~~~~~~~~~s~~~~~l  257 (335)
                                .|++.   ++.+.......  .-|            ..+......         ....++..+++++.+|
T Consensus       152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l  231 (323)
T cd05615         152 MVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSI  231 (323)
T ss_pred             CCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence                      12222   12111100000  000            000000000         0012345688999999


Q ss_pred             HHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +.+||+.||.+|++     ..++++||||....+
T Consensus       232 i~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         232 CKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             HHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence            99999999999997     579999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.92  E-value=4.4e-24  Score=190.87  Aligned_cols=114  Identities=26%  Similarity=0.452  Sum_probs=94.1

Q ss_pred             eeeeeccCceEEEEEEEcC--CCcEEEEEEecccc--hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           87 EHVVGTGSFGVVFQAKCRE--TGEIVAIKKVLQDK--RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~--~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      +.+||+|+||.||+|+++.  ++..||+|.+....  ..+.+|+.+++.++||||+++++++..   ....++|+||||+
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~~   82 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDYA   82 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEeee
Confidence            5689999999999999754  56889999986532  356789999999999999999999854   2345688999999


Q ss_pred             hhhHHHHHHHHhh-----hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PETVNRIARNYSR-----IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g~L~~~l~~~~~-----~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++|.+++.....     ....+++..++.++.||+.||.|||+++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~  128 (317)
T cd07867          83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW  128 (317)
T ss_pred             CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998888764321     1235889999999999999999999988

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.92  E-value=1.2e-24  Score=195.37  Aligned_cols=190  Identities=23%  Similarity=0.405  Sum_probs=135.3

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.++.+++.||+|++.+..       ..+.+|+.++..+ +||||+++++++     ....++|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence            47999999999999999999999999997431       3466899999888 699999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--hHHhH--------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--QLVEI--------------  210 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--~~~~~--------------  210 (335)
                      ||++| +|..++..    .+.+++..++.|+.||+.||+|||++++            +  ....+              
T Consensus        76 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  151 (327)
T cd05617          76 EYVNGGDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD  151 (327)
T ss_pred             eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC
Confidence            99986 99888765    5679999999999999999999999980            0  00000              


Q ss_pred             --hhhcCCCC---HHHhhhhCCCCC----------------CCCCCCCCCCc--------------cccccccCCChHHH
Q 019844          211 --IKVLGTPT---REEIKCMNPNYT----------------EFKFPQIKPHP--------------WHKVFQKRLPPEAV  255 (335)
Q Consensus       211 --~~~~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~~--------------~~~~~~~~~s~~~~  255 (335)
                        ...+|++.   ++.+........                ...+.......              -...++..+++.+.
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  231 (327)
T cd05617         152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKAS  231 (327)
T ss_pred             ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHH
Confidence              01223332   121111000000                00010000000              00124456789999


Q ss_pred             HHHHHhccCCCCCCCC------HHHHhcCcccccCCC
Q 019844          256 DLVCRFFQYSPNLRCT------ALEACVHPFFDELRD  286 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t------~~~~L~hp~f~~~~~  286 (335)
                      ++|.+||..||.+|++      +.++++||||....+
T Consensus       232 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~  268 (327)
T cd05617         232 HVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDW  268 (327)
T ss_pred             HHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence            9999999999999998      579999999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.92  E-value=4.9e-25  Score=191.15  Aligned_cols=112  Identities=27%  Similarity=0.381  Sum_probs=100.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||.|+||.||+|.+..+++.||+|++.+.       .+.+.+|+.++++++||||+++++++     ....++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence            489999999999999999999999999999998642       24567899999999999999999999     666679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.| +|.+++..    ...+++..+..++.||+.||.|||+++
T Consensus        76 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~  120 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSKG  120 (258)
T ss_pred             EEEEeCCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999997 99998876    457999999999999999999999988

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.92  E-value=4.9e-24  Score=192.75  Aligned_cols=119  Identities=26%  Similarity=0.451  Sum_probs=100.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC-Cc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK-EE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~-~~  152 (335)
                      ..++|++.+.||+|+||.||+|.+..++..||||++.+.      ...+.+|+.+|+.++||||+++++++...... ..
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            456799999999999999999999999999999998542      13466899999999999999999998543221 12


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|+||||++++|.+++.     ...+++..++.++.||+.||.|||+.+
T Consensus        93 ~~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~i~~qi~~al~~LH~~g  138 (343)
T cd07880          93 HDFYLVMPFMGTDLGKLMK-----HEKLSEDRIQFLVYQMLKGLKYIHAAG  138 (343)
T ss_pred             ceEEEEEecCCCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3468999999779888876     356999999999999999999999988

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=4.4e-26  Score=205.35  Aligned_cols=196  Identities=24%  Similarity=0.348  Sum_probs=145.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .|.-++.||.|+||-||.|++..+.+.||||.+.-..       ..+.+||..|+++.|||+|.|.+||.-     +...
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr-----e~Ta  101 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR-----EHTA  101 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec-----cchH
Confidence            4778999999999999999999999999999996432       346799999999999999999999953     3338


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-cC-------------------h------HHh
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-VD-------------------Q------LVE  209 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-~~-------------------~------~~~  209 (335)
                      |+|||||-|+-.+++.-.   ++++.|.++..|+.+.+.||.|||+++ ++                   .      ..-
T Consensus       102 WLVMEYClGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P  178 (948)
T KOG0577|consen  102 WLVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP  178 (948)
T ss_pred             HHHHHHHhccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence            899999999888888764   467999999999999999999999988 00                   0      011


Q ss_pred             HhhhcCCCCH---HHhhhhCCC-CCC----CC-------CCCCCC----------------CccccccccCCChHHHHHH
Q 019844          210 IIKVLGTPTR---EEIKCMNPN-YTE----FK-------FPQIKP----------------HPWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       210 ~~~~~g~~~~---~~~~~~~~~-~~~----~~-------~~~~~~----------------~~~~~~~~~~~s~~~~~li  258 (335)
                      ..+++|||.+   +.+..|..+ |..    +.       +..-++                ..-...-...+|..+..||
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fv  258 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFV  258 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHH
Confidence            1245777773   333222221 110    00       000000                0000111246788999999


Q ss_pred             HHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ..||+.=|.+|||.+++|.|+|+..-+.
T Consensus       259 d~CLqKipqeRptse~ll~H~fv~R~Rp  286 (948)
T KOG0577|consen  259 DSCLQKIPQERPTSEELLKHRFVLRERP  286 (948)
T ss_pred             HHHHhhCcccCCcHHHHhhcchhccCCC
Confidence            9999999999999999999999986543

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.92  E-value=1.6e-24  Score=195.48  Aligned_cols=117  Identities=31%  Similarity=0.502  Sum_probs=100.1

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|.+.+.||+|+||.||+|.+..+++.+|+|++.+.      ...+.+|+.+++.+ +||||+++++++..   .+
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~   80 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---EN   80 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CC
Confidence            4456799999999999999999999989999999988532      23456899999999 99999999998833   23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|+||||++++|..++..     ..+++..++.++.||+.||.|||+++
T Consensus        81 ~~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~  127 (337)
T cd07852          81 DKDIYLVFEYMETDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSGN  127 (337)
T ss_pred             CceEEEEecccccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            445889999999999888764     36889999999999999999999988

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.92  E-value=4.3e-24  Score=190.69  Aligned_cols=118  Identities=28%  Similarity=0.484  Sum_probs=100.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcC--CCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRE--TGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|.+.+.||+|+||.||+|.++.  +++.||+|.+....       ....+|+.+++.++||||+++++++..   ....
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~   77 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLE---HADK   77 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeC---CCCc
Confidence            48999999999999999999988  89999999997522       456789999999999999999999943   2235


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++++|.+++....... ..+++..++.++.||+.||.|||+++
T Consensus        78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  128 (316)
T cd07842          78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW  128 (316)
T ss_pred             eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            699999999998888876544322 37899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=3.6e-24  Score=195.27  Aligned_cols=113  Identities=27%  Similarity=0.452  Sum_probs=100.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     .+..
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~~  116 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----QDDK  116 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCC
Confidence            35699999999999999999999999999999998642       23466899999999999999999999     6667


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|+|||||+| +|.+++..     ..+++..++.++.||+.||+|||+++
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~~  162 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMG  162 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            79999999985 99998864     45899999999999999999999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.92  E-value=2.5e-24  Score=189.47  Aligned_cols=112  Identities=34%  Similarity=0.590  Sum_probs=98.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||+|.++.+++.||+|.+.+.      .+.+.+|+.+++.++||||+++++++     ....++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   76 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRLY   76 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeEE
Confidence            599999999999999999999989999999987532      13467899999999999999999999     5666799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++ +|..+...    ...+++..++.++.||+.||.|||+.+
T Consensus        77 lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (286)
T cd07846          77 LVFEFVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSHN  120 (286)
T ss_pred             EEEecCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999997 67665543    456899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=1.5e-24  Score=188.96  Aligned_cols=112  Identities=31%  Similarity=0.483  Sum_probs=98.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------------hhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------------RYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      +|.+...||.|+||.||+|.+..+++.||+|.+....             +.+.+|+.+++.++||||+++++++     
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSS-----   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----
Confidence            4888999999999999999999899999999885321             2466899999999999999999998     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+.++||||++| +|.+++..    .+.+++..++.++.|++.||+|||+++
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~  126 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNRG  126 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhcC
Confidence            455568899999986 99999976    567899999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=1.8e-24  Score=203.94  Aligned_cols=203  Identities=20%  Similarity=0.220  Sum_probs=144.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC---CC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD---KE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~---~~  151 (335)
                      ..+|.+.+.||+|+||.||+|++..+++.||||++...      ...+.+|+.++..++|+||+++++.+.....   ..
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~  110 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN  110 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence            34799999999999999999999999999999998642      2346789999999999999999988753322   12


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHh------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEII------  211 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~------  211 (335)
                      ...+++||||+.+ +|.+++.........+++..++.++.||+.||.|||++++            + .....+      
T Consensus       111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls  190 (496)
T PTZ00283        111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFS  190 (496)
T ss_pred             ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccC
Confidence            2357899999995 9999998655445679999999999999999999999880            0 000001      


Q ss_pred             -------------hhcCCCCH---HHhhhhCCCCCC------------------CCCCCCCC--------CccccccccC
Q 019844          212 -------------KVLGTPTR---EEIKCMNPNYTE------------------FKFPQIKP--------HPWHKVFQKR  249 (335)
Q Consensus       212 -------------~~~g~~~~---~~~~~~~~~~~~------------------~~~~~~~~--------~~~~~~~~~~  249 (335)
                                   ..+|++.+   +.+....  |..                  ..+.....        ......++..
T Consensus       191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~--~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~  268 (496)
T PTZ00283        191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKP--YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPS  268 (496)
T ss_pred             eeccccccccccccccCCcceeCHHHhCCCC--CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence                         11233221   1111000  000                  00000000        0001124567


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +++++.+||.+||+.||.+||++.++|+|||++.+.
T Consensus       269 ~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~  304 (496)
T PTZ00283        269 ISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI  304 (496)
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence            899999999999999999999999999999987653

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-24  Score=205.12  Aligned_cols=120  Identities=24%  Similarity=0.352  Sum_probs=100.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-c---chhHHHHHHHHHhCC-CCceeeece-eeeeCCCCC-ccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-D---KRYKNRELQIMQMLD-HPNIVALKH-CFFSTTDKE-ELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-~---~~~~~~Ei~~l~~l~-hpnIv~~~~-~~~~~~~~~-~~~  154 (335)
                      .+++|.++|.+|||+.||+|++...|..||+|++-. +   .+.+.+||++|+.|. |+|||.|+| ........+ ..-
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            469999999999999999999988889999998742 2   355789999999995 999999999 443332233 344


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.|+||||.| .|-++|....  ..+|+|.+|+.|+.|+|+|+.+||...
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rl--q~~lte~eVLkIf~dv~~AVa~mH~~~  164 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRL--QTRLTEDEVLKIFYDVCEAVAAMHYLK  164 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHH--hccCChHHHHHHHHHHHHHHHHHhcCC
Confidence            7799999994 9999998755  456999999999999999999999988

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.92  E-value=7.6e-24  Score=187.05  Aligned_cols=123  Identities=23%  Similarity=0.337  Sum_probs=105.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|.+.+.||+|+||.||+|.+..+++.+|+|++...   ...+.+|+.+++.+ +||||+++++++..........+|
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~  100 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW  100 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence            45699999999999999999999999999999998642   24567899999999 899999999998754433445688


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++.........+++..++.++.|++.||.|||+.+
T Consensus       101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  148 (291)
T cd06639         101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR  148 (291)
T ss_pred             EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999986 999988754434567999999999999999999999988

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.92  E-value=3.8e-24  Score=188.15  Aligned_cols=113  Identities=32%  Similarity=0.531  Sum_probs=98.9

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++.+.||.|++|.||+|.++.+|..||+|++..+.      ..+.+|+.+++.++||||+++++++     ....+.|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~-----~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVV-----HSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhhee-----ccCCeEEE
Confidence            678899999999999999999999999999986432      3467899999999999999999999     55567999


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||++++|.+++....  ...+++..++.++.||+.||+|||+++
T Consensus        76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~~  119 (283)
T cd07835          76 VFEFLDLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHR  119 (283)
T ss_pred             EEeccCcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999889998887632  236899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.92  E-value=5.8e-24  Score=188.44  Aligned_cols=196  Identities=23%  Similarity=0.261  Sum_probs=139.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..+|++.+.||.|+||.||+|.+..+++.||+|.+...    ...+.+|+.+++.++||||+++++++     ....++|
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~   92 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW   92 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCEEE
Confidence            35699999999999999999999999999999998642    24467899999999999999999999     5556689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhhc--------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKVL--------  214 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~~--------  214 (335)
                      +||||++| +|.+++..     ..+++..+..++.|++.||.|||+.++            + .....+..+        
T Consensus        93 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          93 VVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             EeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            99999996 99888863     458999999999999999999999881            0 000000111        


Q ss_pred             ---------CCCC---HHHhhh---------------------hCCCCCCCCC-C---CCC-CCccccccccCCChHHHH
Q 019844          215 ---------GTPT---REEIKC---------------------MNPNYTEFKF-P---QIK-PHPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       215 ---------g~~~---~~~~~~---------------------~~~~~~~~~~-~---~~~-~~~~~~~~~~~~s~~~~~  256 (335)
                               |++.   ++.+..                     +.+.|..... .   ... ........+..++..+.+
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (297)
T cd06656         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRD  247 (297)
T ss_pred             CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHH
Confidence                     1111   111100                     0011100000 0   000 000011123457788999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ||.+||..||++||++.++|+||||.....
T Consensus       248 li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         248 FLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             HHHHHccCChhhCcCHHHHhcCchhccccc
Confidence            999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.92  E-value=7e-24  Score=190.77  Aligned_cols=114  Identities=25%  Similarity=0.352  Sum_probs=100.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|.+.+.||+|+||.||+++++.+++.||+|++.+.       ...+.+|+.++..++|+||+++++++     ....+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence            3699999999999999999999999999999998642       13356789999999999999999999     66677


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||||+.| +|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~~  122 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQLH  122 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999985 999998752   356899999999999999999999988

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.92  E-value=7.6e-24  Score=190.63  Aligned_cols=113  Identities=21%  Similarity=0.341  Sum_probs=99.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|.+.+.||+|+||.||+++++.+++.||+|++.+.       ...+.+|+.++..++|+||+++++++     .+..++
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~   76 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENNL   76 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCEE
Confidence            599999999999999999999999999999998642       12366899999999999999999999     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.| +|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus        77 ~lv~ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~  122 (332)
T cd05623          77 YLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQLH  122 (332)
T ss_pred             EEEEeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999985 999998752   356899999999999999999999998

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.92  E-value=2.5e-24  Score=187.64  Aligned_cols=113  Identities=23%  Similarity=0.333  Sum_probs=100.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .+|++.+.||+|+||.||+|+++.+++.||+|++...    ...+.+|+.+++.++||||+++++++     .....+|+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~-----~~~~~~~i   83 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSY-----LSREKLWI   83 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEE-----EeCCEEEE
Confidence            4699999999999999999999999999999998632    23467899999999999999999999     44556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+++ +|.+++..    ...+++..+..++.|++.||+|||+.+
T Consensus        84 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~  126 (267)
T cd06646          84 CMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSKG  126 (267)
T ss_pred             EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996 99988875    567899999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.92  E-value=6e-24  Score=183.90  Aligned_cols=114  Identities=24%  Similarity=0.359  Sum_probs=100.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+...      ...+.+|+.+++.++||||+++++++     .....+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF-----LDKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeee-----ccCCEEE
Confidence            388999999999999999999999999999998532      34567899999999999999999999     5556789


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++....  ...+++..++.++.||+.||.|||+.+
T Consensus        76 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~  121 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSKK  121 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999986 9999988642  457999999999999999999999988

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.4e-24  Score=191.53  Aligned_cols=114  Identities=26%  Similarity=0.461  Sum_probs=100.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+.+..       +.+..|+.+++.++||||+++++.+     ....++
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~   76 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETYL   76 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCEE
Confidence            5999999999999999999999999999999986432       3467899999999999999999998     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.| +|.+++....  ...+++..++.++.||+.||+|||+.+
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~  123 (316)
T cd05574          77 CLVMDYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLLG  123 (316)
T ss_pred             EEEEEecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999986 9999887532  357999999999999999999999988

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.92  E-value=6.6e-24  Score=183.82  Aligned_cols=115  Identities=29%  Similarity=0.416  Sum_probs=98.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .|++++.||+|+||.||++.++.+++.||+|.+...      .+.+.+|+.+++.++|+||+++++.+.    .....+|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~   76 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY   76 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence            389999999999999999999999999999998532      234678999999999999999998873    2344688


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||++| +|.+++....  ...+++.+++.++.||+.||.|||+++
T Consensus        77 lv~e~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~  122 (257)
T cd08223          77 IVMGFCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEKH  122 (257)
T ss_pred             EEecccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 9998887632  456899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.92  E-value=2.9e-24  Score=186.04  Aligned_cols=112  Identities=29%  Similarity=0.514  Sum_probs=99.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|+..+.||+|+||+||+|.+..++..||+|.+....         +.+.+|+.+++.++|+||+++++++     ....
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTE-----REED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeE-----ecCC
Confidence            4888899999999999999998899999999985422         3467899999999999999999998     5556


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|++|||++| +|.+++..    ...+++..++.++.||+.||.|||+.+
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDRN  122 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            68999999996 99998875    456899999999999999999999988

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.92  E-value=2.4e-24  Score=193.30  Aligned_cols=190  Identities=25%  Similarity=0.360  Sum_probs=130.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHH-HHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQ-IMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~-~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||+||+|.++.+|+.||+|++.+..       ..+.+|.. +++.++||||+++++++     .....+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence            46999999999999999999999999986431       23345554 56778999999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHh--------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEII--------------  211 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~--------------  211 (335)
                      ||+.| +|...+..    .+.+++..++.++.||+.||+|||++|+            + .....+              
T Consensus        76 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~  151 (325)
T cd05604          76 DFVNGGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD  151 (325)
T ss_pred             cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC
Confidence            99996 89887765    5679999999999999999999999981            0 000001              


Q ss_pred             ---hhcCCCC---HHHhhhhCCCC--CCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhc
Q 019844          212 ---KVLGTPT---REEIKCMNPNY--TEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       212 ---~~~g~~~---~~~~~~~~~~~--~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L  262 (335)
                         ..+|++.   ++.+.......  .-|.+.-      ....+|               ...+++..+..+.++|++||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll  231 (325)
T cd05604         152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELL  231 (325)
T ss_pred             CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHh
Confidence               1122222   11111100000  0000000      000011               01123567899999999999


Q ss_pred             cCCCCCCCCH----HHHhcCcccccCCC
Q 019844          263 QYSPNLRCTA----LEACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~----~~~L~hp~f~~~~~  286 (335)
                      +.||.+||++    .++++||||....+
T Consensus       232 ~~~p~~R~~~~~~~~~i~~h~~f~~~~~  259 (325)
T cd05604         232 EKDRQRRLGAKEDFLEIQEHPFFESLSW  259 (325)
T ss_pred             ccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence            9999999976    69999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=5.4e-24  Score=187.10  Aligned_cols=120  Identities=23%  Similarity=0.354  Sum_probs=101.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCC-CCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTD-KEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~-~~~~~~~  156 (335)
                      ..|++.+.||.|+||.||+|.+..+++.+|+|++...   ...+..|+.+++.+ +|+||+++++++..... ....++|
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   95 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW   95 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence            4699999999999999999999999999999998643   23567899999998 79999999999864322 2356789


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||+++ +|.+++....  ...+++..++.++.||+.||.|||+.+
T Consensus        96 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~  141 (282)
T cd06636          96 LVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAHK  141 (282)
T ss_pred             EEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999996 9999887633  356889999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=1.2e-23  Score=187.32  Aligned_cols=121  Identities=29%  Similarity=0.426  Sum_probs=100.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCC---C
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTD---K  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~---~  150 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||||.+....      ....+|+.+++.++||||+++++++.....   .
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR   89 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence            3446999999999999999999999999999999885321      234679999999999999999998854321   2


Q ss_pred             CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....|+||||+.++|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        90 ~~~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~  139 (310)
T cd07865          90 YKGSFYLVFEFCEHDLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRNK  139 (310)
T ss_pred             CCceEEEEEcCCCcCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33557899999999888877642   346899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.92  E-value=3.8e-24  Score=185.27  Aligned_cols=114  Identities=25%  Similarity=0.353  Sum_probs=99.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||+|+||.||+|.++.+|..+|+|.+...      ...+.+|+.+++.++|+||+++++.+     .....+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence            489999999999999999999999999999998532      24567899999999999999999998     5556799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||+++ +|.+++....  ...+++..+..++.||+.||.|||+.+
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIHDRK  121 (257)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999986 9999887532  335899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=4.8e-24  Score=188.43  Aligned_cols=115  Identities=26%  Similarity=0.393  Sum_probs=99.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .+.|++++.||.|+||.||+|++..+++.+|+|.+....    ..+.+|+.+++.++||||+++++++     ....++|
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   85 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF-----YWDGKLW   85 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE-----EeCCeEE
Confidence            356999999999999999999999999999999986432    3466899999999999999999998     4445689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|..++...   ...+++..++.++.||+.||.|||+++
T Consensus        86 lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~  130 (292)
T cd06644          86 IMIEFCPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSMK  130 (292)
T ss_pred             EEEecCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999996 887776542   356899999999999999999999988

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=7.3e-24  Score=187.71  Aligned_cols=195  Identities=21%  Similarity=0.213  Sum_probs=138.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|.+...    ...+.+|+.+++.++||||+++++.+     ....++|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~-----~~~~~~~   93 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELW   93 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeCCEEE
Confidence            34699999999999999999999999999999998643    24567899999999999999999998     4445689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh---------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV---------  213 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~---------  213 (335)
                      +||||++| +|.+++..     ..+++.++..++.|++.||.|||++++            +. ....+..         
T Consensus        94 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~  168 (296)
T cd06654          94 VVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  168 (296)
T ss_pred             EeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccc
Confidence            99999996 99998863     458999999999999999999999981            00 0000011         


Q ss_pred             --------cCCCC---HHHhhhhCC------------------CCCCCCCCCC--------CCCccccccccCCChHHHH
Q 019844          214 --------LGTPT---REEIKCMNP------------------NYTEFKFPQI--------KPHPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       214 --------~g~~~---~~~~~~~~~------------------~~~~~~~~~~--------~~~~~~~~~~~~~s~~~~~  256 (335)
                              .|++.   ++.+.....                  ...++.....        .........+..+++.+.+
T Consensus       169 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (296)
T cd06654         169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD  248 (296)
T ss_pred             cccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHH
Confidence                    12211   111110000                  0000000000        0000011123457889999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ||.+||..||.+|||+.++++||||...+
T Consensus       249 li~~~l~~~p~~Rpt~~eil~~~~~~~~~  277 (296)
T cd06654         249 FLNRCLDMDVEKRGSAKELLQHQFLKIAK  277 (296)
T ss_pred             HHHHHCcCCcccCcCHHHHhhChhhhccC
Confidence            99999999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=1.7e-24  Score=188.65  Aligned_cols=113  Identities=21%  Similarity=0.320  Sum_probs=100.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|.++...    ..+.+|+.+++.++||||+++++++     .....+|+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~-----~~~~~~~l   83 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY-----LRRDKLWI   83 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE-----EeCCEEEE
Confidence            46999999999999999999999999999999986432    3467899999999999999999998     45566899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+++ +|.+++..    .+.+++..++.++.|++.||.|||++|
T Consensus        84 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~  126 (267)
T cd06645          84 CMEFCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSKG  126 (267)
T ss_pred             EEeccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996 99998876    567999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.92  E-value=5.2e-24  Score=208.74  Aligned_cols=121  Identities=26%  Similarity=0.363  Sum_probs=104.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ....+|.+++.||.|+||.||+|.++.++..||+|++...      ...+.+|+.+|+.|+|||||+++++|..   ...
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~~   86 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KAN   86 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cCC
Confidence            3445799999999999999999999999999999998632      2456789999999999999999999854   233


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      ..+|||||||++ +|.++|.........+++..++.|+.||+.||.|||..
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~  137 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL  137 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            468999999995 99999986544456799999999999999999999984

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=187.72  Aligned_cols=114  Identities=19%  Similarity=0.257  Sum_probs=101.2

Q ss_pred             eeeeEE-eeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIA-EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~-~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+-|++ .+.||+|+|+.|--|....+|..||||+|.+.    ..++.||++++.++ .|+||++++++|     +++..
T Consensus        76 ~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF-----Edd~~  150 (463)
T KOG0607|consen   76 EDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF-----EDDTR  150 (463)
T ss_pred             HHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh-----cccce
Confidence            344655 46899999999999999999999999999764    36688999999999 699999999999     77777


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+|||-|.| .|...|..    +..|+|.++..+.++|+.||+|||.+|
T Consensus       151 FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~kg  196 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHTKG  196 (463)
T ss_pred             EEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhhcC
Confidence            9999999996 88777776    678999999999999999999999998

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.92  E-value=9.4e-24  Score=183.38  Aligned_cols=115  Identities=23%  Similarity=0.364  Sum_probs=99.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||.|+||.||+|.+..++..||+|.+...      ...+..|+.+++.++||||+++++++..   .....+|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence            489999999999999999999999999999998532      2346689999999999999999998753   3345688


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH  200 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH  200 (335)
                      ++|||+++ +|.+++.........+++..++.++.||+.||.|||
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH  122 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH  122 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            99999996 999999875544567999999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=6.3e-24  Score=185.65  Aligned_cols=112  Identities=31%  Similarity=0.500  Sum_probs=98.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--------------chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--------------KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      +|.+.+.||.|+||.||+|.+..+++.||+|.+...              .+.+.+|+.+++.++||||+++++++    
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~----   77 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFE----   77 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEe----
Confidence            589999999999999999999999999999987521              12356899999999999999999998    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+++||||++| +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        78 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~  128 (272)
T cd06629          78 -TTEEYLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHSKG  128 (272)
T ss_pred             -ccCCceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             455568999999986 99998876    467999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=7.2e-25  Score=190.07  Aligned_cols=111  Identities=32%  Similarity=0.581  Sum_probs=99.3

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++++.||+|+||+||+|.+..+++.||+|++....      ....+|+.+++.++||||+++++++     ....++++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVF-----QDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEE-----EESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccc-----cccccccc
Confidence            889999999999999999999999999999997542      1234599999999999999999999     44666889


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+.+ +|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        76 v~~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~Lh~~~  118 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQK----NKPLSEEEILKIAYQILEALAYLHSKG  118 (260)
T ss_dssp             EEEEETTEBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccc----ccccccccccccccccccccccccccc
Confidence            9999998 99999984    577999999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=9.1e-24  Score=187.08  Aligned_cols=195  Identities=23%  Similarity=0.273  Sum_probs=138.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..+|++.+.||.|+||.||+|.+..+++.||+|.+...    ...+.+|+.+++.++||||+++++++     .....+|
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~   92 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF-----LVGDELF   92 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE-----ecCceEE
Confidence            35699999999999999999999999999999998532    24567899999999999999999999     4555699


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhhcCCCCH---
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKVLGTPTR---  219 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~~g~~~~---  219 (335)
                      +||||+.| +|..++..     ..+++.++..++.|++.||.|||++++            + .....+..+|....   
T Consensus        93 lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655          93 VVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             EEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccc
Confidence            99999996 99888763     458999999999999999999999981            0 00000111111000   


Q ss_pred             ---------HHhhhhCCCCCC------------------------CCCCCCC----------CCccccccccCCChHHHH
Q 019844          220 ---------EEIKCMNPNYTE------------------------FKFPQIK----------PHPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       220 ---------~~~~~~~~~~~~------------------------~~~~~~~----------~~~~~~~~~~~~s~~~~~  256 (335)
                               ....++.|+...                        ..+....          ........+..+++.+.+
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (296)
T cd06655         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRD  247 (296)
T ss_pred             ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHH
Confidence                     000011111100                        0000000          000001123457889999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ||++||..||.+|||+.++++||||....
T Consensus       248 li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         248 FLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             HHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence            99999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=4.1e-24  Score=187.70  Aligned_cols=108  Identities=20%  Similarity=0.335  Sum_probs=93.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++.++||+|+||.||+|.+..+++.||+|.+..+     ...+.+|+.+++.++||||+++++++     ......++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~l   76 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAF-----FVENRISI   76 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----EECCEEEE
Confidence            588999999999999999999999999999998643     23467899999999999999999999     44455889


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+++ +|..+        ..+++..+..++.|++.||.|||+.+
T Consensus        77 v~e~~~~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~  115 (279)
T cd06619          77 CTEFMDGGSLDVY--------RKIPEHVLGRIAVAVVKGLTYLWSLK  115 (279)
T ss_pred             EEecCCCCChHHh--------hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999996 66432        24789999999999999999999998

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=7e-25  Score=200.88  Aligned_cols=189  Identities=26%  Similarity=0.357  Sum_probs=142.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecch
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP  163 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~  163 (335)
                      -+||+|+||+||.|+++.|...+|||.|+..    .+-+..||.+.++|+|.|||+++|.+     ..++++-|.||-++
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVP  655 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVP  655 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCC
Confidence            4799999999999999999999999999643    24467999999999999999999998     77778999999999


Q ss_pred             h-hHHHHHHHHhhhcCCC--CHHHHHHHHHHHHHHHHHHHhCC------------c--ChHHhHhhhcC-----------
Q 019844          164 E-TVNRIARNYSRIHQRM--PLIYVKLYTYQICRALAYIHNCI------------V--DQLVEIIKVLG-----------  215 (335)
Q Consensus       164 g-~L~~~l~~~~~~~~~l--~~~~~~~i~~qi~~aL~yLH~~~------------~--~~~~~~~~~~g-----------  215 (335)
                      | +|.++++.   ..+++  .|..+-+|.+||++||.|||.+.            +  ......+..+|           
T Consensus       656 GGSLSsLLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~  732 (1226)
T KOG4279|consen  656 GGSLSSLLRS---KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPC  732 (1226)
T ss_pred             CCcHHHHHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcc
Confidence            6 99999986   35777  88999999999999999999987            0  00111112222           


Q ss_pred             ------CCC---HHHhhhhCCCCCC-----------------------CCCCC-----CCCCccccccccCCChHHHHHH
Q 019844          216 ------TPT---REEIKCMNPNYTE-----------------------FKFPQ-----IKPHPWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       216 ------~~~---~~~~~~~~~~~~~-----------------------~~~~~-----~~~~~~~~~~~~~~s~~~~~li  258 (335)
                            |..   ++.+..+..+|..                       ..-++     ......++.+|..++.++++||
T Consensus       733 TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fi  812 (1226)
T KOG4279|consen  733 TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFI  812 (1226)
T ss_pred             ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHH
Confidence                  222   2222222222221                       11010     0111223456778899999999


Q ss_pred             HHhccCCCCCCCCHHHHhcCcccccC
Q 019844          259 CRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       259 ~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      .+|+.+||.+||+|.++|.+||++.-
T Consensus       813 lrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  813 LRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHHcCCCcccCccHHHhccCcccccC
Confidence            99999999999999999999999875

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.92  E-value=1.5e-23  Score=184.12  Aligned_cols=114  Identities=30%  Similarity=0.447  Sum_probs=96.1

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++.+.||+|+||.||+|.++.+++.||+|++.+..     ....+|+.+++++. |+||+++++++...   ...++++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l   77 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL   77 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence            678999999999999999999999999999986432     22347899999885 99999999998532   2256899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+.|+|.+.+...   ...+++..++.++.||+.||.|||+.+
T Consensus        78 v~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~  120 (282)
T cd07831          78 VFELMDMNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRNG  120 (282)
T ss_pred             EEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999888877652   356899999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=1.3e-23  Score=186.51  Aligned_cols=121  Identities=29%  Similarity=0.407  Sum_probs=100.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCC----
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTD----  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~----  149 (335)
                      ..++|++.+.||.|+||.||+|.++.+++.||+|.+....      ..+.+|+.+++.++||||+++++++....+    
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            3456999999999999999999999999999999986422      245689999999999999999999854331    


Q ss_pred             -CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 -KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 -~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ....++|+||||+++++.+++...   ...+++..++.++.||+.||.|||+.+
T Consensus        85 ~~~~~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  136 (302)
T cd07864          85 KKDKGAFYLVFEYMDHDLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKKN  136 (302)
T ss_pred             cccCCcEEEEEcccCccHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             123378999999999887776642   346899999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.7e-23  Score=189.09  Aligned_cols=117  Identities=30%  Similarity=0.454  Sum_probs=97.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~  153 (335)
                      ..+|.+.+.||+|+||.||+|.++.+|+.||||++.+.      ...+.+|+.+++.++||||+++++++..... ....
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            35799999999999999999999999999999998642      1346789999999999999999999854321 1223


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||+.++|..++      ...+++..++.++.||+.||.|||+++
T Consensus        94 ~~~lv~e~~~~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~  137 (342)
T cd07879          94 DFYLVMPYMQTDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSAG  137 (342)
T ss_pred             eEEEEecccccCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            46899999988776654      245899999999999999999999988

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.92  E-value=7.4e-24  Score=186.27  Aligned_cols=113  Identities=27%  Similarity=0.381  Sum_probs=97.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      -|++.+.||.|+||.||+|.+..++..+|+|.+...    ...+.+|+.+++.++||||+++++++     ....+.|+|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~~v   80 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-----YYENNLWIL   80 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEE-----eeCCEEEEE
Confidence            378899999999999999999999999999998643    23467899999999999999999999     445568999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+++ +|..++...   ...+++..+..++.||+.||.|||+.+
T Consensus        81 ~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~~  123 (282)
T cd06643          81 IEFCAGGAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHENK  123 (282)
T ss_pred             EEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999996 887776541   456999999999999999999999988

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.92  E-value=4.3e-24  Score=185.66  Aligned_cols=105  Identities=27%  Similarity=0.403  Sum_probs=93.2

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||.|+||.||+|.+..+++.||+|++.+..       +.+.+|+.+++.++||||+++++.+     ....++|+||||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence            799999999999999999999999986422       4577899999999999999999998     4555689999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +| +|.+++..    ...+++..+..++.||+.||.|||+++
T Consensus        76 ~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~  113 (262)
T cd05572          76 LGGELWTILRD----RGLFDEYTARFYIACVVLAFEYLHNRG  113 (262)
T ss_pred             CCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            86 99999976    456899999999999999999999988

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.92  E-value=1e-23  Score=187.53  Aligned_cols=112  Identities=23%  Similarity=0.433  Sum_probs=100.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +|.+.+.||+|+||.||++.++.+++.||+|.+.+..       ..+.+|+.+++.++||||+++++.+     ....++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~   76 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRHL   76 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCEE
Confidence            5999999999999999999999999999999986432       3456899999999999999999998     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++..    .+.+++..+..++.|++.||.|||+++
T Consensus        77 ~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~  121 (305)
T cd05609          77 CMVMEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNYG  121 (305)
T ss_pred             EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999996 99999876    567999999999999999999999988

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.92  E-value=1.4e-23  Score=184.88  Aligned_cols=112  Identities=38%  Similarity=0.593  Sum_probs=96.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||+|+||.||+|.+..+++.||+|++...      ...+.+|+.+++.++|+||+++++++     .....++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~   76 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAF-----RRKGRLY   76 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheE-----EECCEEE
Confidence            599999999999999999999999999999988532      24577999999999999999999999     4455689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++ .+..+...    ...+++..++.++.||+.||.|||.++
T Consensus        77 iv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~  120 (288)
T cd07833          77 LVFEYVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSHN  120 (288)
T ss_pred             EEEecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999997 44444433    456999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.91  E-value=3.9e-24  Score=191.98  Aligned_cols=190  Identities=22%  Similarity=0.304  Sum_probs=130.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHH-HHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNREL-QIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei-~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||+||+|+++.+++.||+|++.+..       ..+.+|. .+++.++||||+++++++     .....+|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence            46999999999999999999999999986421       2233444 356788999999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhh-------------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIK-------------  212 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~-------------  212 (335)
                      ||+.| +|.+++..    .+.+++..++.++.||+.||.|||++|+            + .....+.             
T Consensus        76 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~  151 (325)
T cd05602          76 DYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG  151 (325)
T ss_pred             eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC
Confidence            99996 99888876    5679999999999999999999999980            0 0000011             


Q ss_pred             ----hcCCCC---HHHhhhhCCCC--CCCCCCC------CCCCcc---------------ccccccCCChHHHHHHHHhc
Q 019844          213 ----VLGTPT---REEIKCMNPNY--TEFKFPQ------IKPHPW---------------HKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       213 ----~~g~~~---~~~~~~~~~~~--~~~~~~~------~~~~~~---------------~~~~~~~~s~~~~~li~~~L  262 (335)
                          .+|++.   ++.+.......  .-|.+.-      ....+|               ...+++.+++.+.++|.+||
T Consensus       152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l  231 (325)
T cd05602         152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLL  231 (325)
T ss_pred             CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHc
Confidence                123322   12111100000  0000000      000000               01233578999999999999


Q ss_pred             cCCCCCCCCHH----HHhcCcccccCCC
Q 019844          263 QYSPNLRCTAL----EACVHPFFDELRD  286 (335)
Q Consensus       263 ~~dP~~R~t~~----~~L~hp~f~~~~~  286 (335)
                      +.||.+|+++.    ++++|+||....+
T Consensus       232 ~~~p~~R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         232 QKDRTKRLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             ccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence            99999999875    8999999977644

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.91  E-value=1.1e-23  Score=184.84  Aligned_cols=110  Identities=20%  Similarity=0.343  Sum_probs=97.3

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      |++.+.||.|+||.||+|.+..+++.||||.+....     ..+.+|+.+++.++||||+++++++     ....++|+|
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv   80 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKLWII   80 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE-----EeCCeEEEE
Confidence            888999999999999999999899999999875322     3467899999999999999999999     555668999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||++| +|.+++..     ..+++..+..++.|++.||.|||+.+
T Consensus        81 ~e~~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06641          81 MEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEK  121 (277)
T ss_pred             EEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            999996 89888763     46899999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.91  E-value=1.3e-25  Score=180.80  Aligned_cols=196  Identities=29%  Similarity=0.499  Sum_probs=150.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-cchhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-DKRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-~~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..++|++.+++|+|.|+.|+.|....+++.++||+++. ..+.+.||+.||..|. ||||++++++..++.   .....+
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~---SktpaL  112 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKTPSL  112 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccCchh
Confidence            34579999999999999999999999999999999964 4567889999999995 999999999985433   223568


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------------------  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------------  203 (335)
                      |+||+.. |...+..       .++..+++.++.|++.||.|+|++|                                 
T Consensus       113 iFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp  185 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP  185 (338)
T ss_pred             HhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence            9999997 6655543       4888899999999999999999999                                 


Q ss_pred             ------------------------------------------------------cChHHhHhhhcCCCCHHH-hh----h
Q 019844          204 ------------------------------------------------------VDQLVEIIKVLGTPTREE-IK----C  224 (335)
Q Consensus       204 ------------------------------------------------------~~~~~~~~~~~g~~~~~~-~~----~  224 (335)
                                                                            .+++.++..++||..-.. +.    .
T Consensus       186 ~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  186 GKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             CceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence                                                                  456666666666543111 00    1


Q ss_pred             hCCCCCCCCCCCCCCCcccccccc----CCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          225 MNPNYTEFKFPQIKPHPWHKVFQK----RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~----~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ..|.|.. .+......+|...++.    -.++++.|||.++|.+|..+|+||.|++.||||.....
T Consensus       266 Ldp~~~~-i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~  330 (338)
T KOG0668|consen  266 LDPQFED-ILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE  330 (338)
T ss_pred             CChhHhh-HhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence            2233322 1223344566654432    25799999999999999999999999999999987654

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.91  E-value=1e-23  Score=192.40  Aligned_cols=114  Identities=27%  Similarity=0.454  Sum_probs=100.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~~~  115 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDD  115 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcC
Confidence            345799999999999999999999999999999998642       23456899999999999999999999     566


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++|+|||||+| +|.+++..     ..+++..++.++.||+.||.|||+++
T Consensus       116 ~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~  162 (371)
T cd05622         116 RYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG  162 (371)
T ss_pred             CEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            779999999985 99998864     45899999999999999999999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.91  E-value=3e-24  Score=186.40  Aligned_cols=116  Identities=23%  Similarity=0.356  Sum_probs=98.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc---------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ---------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|.+.+.||+|+||.||++.+..++..+++|+++.         ....+.+|+.+++.++||||+++++++     ....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence            58999999999999999999988877777776642         112355799999999999999999998     4445


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++||||+++ +|.+++.........+++..++.++.|++.||.|||+++
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR  126 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            58899999996 999988765444567999999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=2.4e-23  Score=180.32  Aligned_cols=114  Identities=30%  Similarity=0.419  Sum_probs=100.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++++.||.|+||.||.+++..+++.+|+|.+...      ...+.+|+.++++++|+||+++++++     .....++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHF-----MDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEE-----ecCCeEE
Confidence            599999999999999999999999999999987532      24567899999999999999999999     4556699


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||+| +|.+++....  ...+++..+..++.|++.||.|||+.+
T Consensus        76 ~~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAG  121 (256)
T ss_pred             EEEEecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 9999887632  356899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.91  E-value=7e-24  Score=190.00  Aligned_cols=107  Identities=26%  Similarity=0.416  Sum_probs=90.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHH-HHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQ-IMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~-~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ++||+|+||.||+|++..+++.||+|++.+..       ..+.+|+. +++.++||||+++++++     .....+|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence            47999999999999999999999999986421       22344544 67889999999999998     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+| +|...+..    ...+++..++.++.||+.||.|||+++
T Consensus        76 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~  116 (321)
T cd05603          76 DYVNGGELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSLN  116 (321)
T ss_pred             cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996 89877765    567999999999999999999999988

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.91  E-value=1e-23  Score=185.06  Aligned_cols=112  Identities=35%  Similarity=0.541  Sum_probs=98.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++.+.||+|+||.||+|.+..+++.||+|++....      ..+.+|+.+++.++|+||+++++++     ....++++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVI-----HTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhh-----hcCCceEE
Confidence            667889999999999999999999999999987531      3456899999999999999999999     44466999


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++++|.+++...   ...+++..++.++.|++.||.|||+++
T Consensus        76 v~e~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (282)
T cd07829          76 VFEYCDMDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSHR  118 (282)
T ss_pred             EecCcCcCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999998862   146999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.91  E-value=8.3e-24  Score=184.36  Aligned_cols=114  Identities=26%  Similarity=0.446  Sum_probs=98.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|++.+.||+|+||.||+|.+..++..||+|.+...         ...+.+|+.+++.++||||+++++++..   ....
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~   79 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAEK   79 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCCC
Confidence            599999999999999999999999999999988532         1346789999999999999999998843   2235


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++++|||+++ +|.+++..    .+.+++..++.++.||+.||+|||+++
T Consensus        80 ~~~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~  126 (266)
T cd06651          80 TLTIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSNM  126 (266)
T ss_pred             EEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68899999986 99998875    556899999999999999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.91  E-value=9.5e-24  Score=183.43  Aligned_cols=112  Identities=28%  Similarity=0.458  Sum_probs=101.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|.+.+.||.|++|.||+|.+..+++.||+|++...     ...+.+|+..+..++|+||+++++++     .....+++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAF-----YKEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----ccCCeEEE
Confidence            589999999999999999999999999999998654     24577899999999999999999999     45566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                      ||||++| +|.+++..    ...+++..++.++.||+.||.|||+ ++
T Consensus        77 v~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~~  120 (264)
T cd06623          77 VLEYMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKRH  120 (264)
T ss_pred             EEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            9999995 99999986    4679999999999999999999999 87

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.91  E-value=2.3e-24  Score=175.39  Aligned_cols=125  Identities=21%  Similarity=0.267  Sum_probs=110.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEec----ccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~----~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ....||++.+.||.|+|+-||+++...+++.||+|+|.    .+.+...+|++..++++||||++++++...........
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            44568999999999999999999999999999999984    33466789999999999999999999987655556667


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .||+++|.. |+|.+.+......+..++|.++..|+.+|++||++||+..
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~  147 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE  147 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence            999999998 7999999887766668999999999999999999999887

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.91  E-value=1.4e-23  Score=181.43  Aligned_cols=116  Identities=25%  Similarity=0.461  Sum_probs=101.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||.|+||.||++.+..++..||+|++...      ...+.+|+++++.++|||++++++.+     .....++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~-----~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESF-----EEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEE-----ecCCEEE
Confidence            489999999999999999999999999999998643      24567899999999999999999998     4446689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++.........+++..+..++.|++.||.|||+++
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  123 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK  123 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 999998874333467999999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6e-24  Score=186.03  Aligned_cols=111  Identities=22%  Similarity=0.360  Sum_probs=98.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|.+.+.||.|+||.||+|.+..+++.||+|.+....     ..+.+|+.+++.++|+||+++++++     .+..++|+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~   76 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSF-----LKGSKLWI   76 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEE-----EECCeEEE
Confidence            5899999999999999999999999999999986432     3467899999999999999999998     44466999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||+++ +|.+++..     ..+++..++.++.|++.||.|||+++
T Consensus        77 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~~  118 (274)
T cd06609          77 IMEYCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEEG  118 (274)
T ss_pred             EEEeeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996 99988874     37999999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.91  E-value=1.1e-23  Score=185.01  Aligned_cols=112  Identities=33%  Similarity=0.589  Sum_probs=98.0

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |.+.+.||.|++|.||+|.+..+++.+|+|.+....      ..+.+|+.+++.++|+||+++++++     .....+++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence            567889999999999999999999999999986432      3467899999999999999999998     44566899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++++|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus        76 v~e~~~~~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~  118 (283)
T cd05118          76 VFEFMDTDLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSHG  118 (283)
T ss_pred             EEeccCCCHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999888887652   357999999999999999999999998

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=2.6e-24  Score=187.28  Aligned_cols=113  Identities=24%  Similarity=0.396  Sum_probs=99.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++.+.||.|+||.||+|.++.+++.+|+|.+....     ..+.+|+.+++.++||||+++++++     .....+++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~l   76 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF-----YNNGDISI   76 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheee-----ecCCEEEE
Confidence            5888999999999999999999999999999986432     3467899999999999999999999     44566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                      +|||++| +|.+++...   ...+++..++.++.||+.||.|||+ .+
T Consensus        77 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~  121 (265)
T cd06605          77 CMEYMDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKHK  121 (265)
T ss_pred             EEEecCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence            9999995 999998862   2679999999999999999999999 66

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2e-23  Score=181.33  Aligned_cols=114  Identities=25%  Similarity=0.394  Sum_probs=101.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|++...    ...+.+|+.+++.++||||+++++++     .....+|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEEE
Confidence            5699999999999999999999999999999998643    34578999999999999999999998     45556999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||++| +|.+++...   ...+++..++.++.|++.||.|||+++
T Consensus        78 ~~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~  121 (262)
T cd06613          78 VMEYCGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHETG  121 (262)
T ss_pred             EEeCCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996 998888752   257999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.5e-24  Score=189.86  Aligned_cols=105  Identities=27%  Similarity=0.392  Sum_probs=89.6

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC---CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML---DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ||+|+||+||+|+++.+++.||||++.+..       .....|..++..+   +||||+++++++     ....++|+||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence            799999999999999999999999996421       2234566676655   699999999999     5566799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+.| +|..++..    .+.+++..++.++.||+.||+|||+++
T Consensus        76 e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~~  116 (330)
T cd05586          76 DYMSGGELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKYD  116 (330)
T ss_pred             cCCCCChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99985 99888875    667999999999999999999999998

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.91  E-value=2.6e-23  Score=180.95  Aligned_cols=115  Identities=25%  Similarity=0.354  Sum_probs=100.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++++.||.|+||.||+|....++..+|+|++...     ...+.+|+.+++.++|+||+++++.+     .....+|+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~i   76 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSF-----VVGDELWL   76 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEE-----eeCCEEEE
Confidence            599999999999999999999889999999998643     24577899999999999999999998     45556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+++| +|.+++..... ...+++..++.++.||+.||.|||+++
T Consensus        77 v~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~  122 (267)
T cd06610          77 VMPYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNG  122 (267)
T ss_pred             EEeccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996 99999876321 246899999999999999999999988

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=7.6e-24  Score=186.54  Aligned_cols=199  Identities=20%  Similarity=0.310  Sum_probs=139.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++++.||+|+||.||+|.+..++..||+|.+...     ...+.+|+.+++.++||||+++++++     ....++|+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~l   76 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVYM   76 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEEE
Confidence            589999999999999999999999999999988642     13567899999999999999999998     45567999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-Cc------------Ch-HHhHhhhcCC------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-IV------------DQ-LVEIIKVLGT------  216 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~~------------~~-~~~~~~~~g~------  216 (335)
                      ||||++| +|..++.... ....+++..+..++.||+.||.|||+. ++            +. ....+..+|.      
T Consensus        77 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  155 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA  155 (286)
T ss_pred             EEeecCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence            9999997 9988887521 124799999999999999999999964 50            00 0000111111      


Q ss_pred             ---------CC---HHHhhhhCC----CCC------------------CCCCCCCCCCc-----------cccccccCCC
Q 019844          217 ---------PT---REEIKCMNP----NYT------------------EFKFPQIKPHP-----------WHKVFQKRLP  251 (335)
Q Consensus       217 ---------~~---~~~~~~~~~----~~~------------------~~~~~~~~~~~-----------~~~~~~~~~s  251 (335)
                               +.   ++.+....+    .+.                  ...+.......           ....++..++
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd06622         156 SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYS  235 (286)
T ss_pred             CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccC
Confidence                     11   111110000    000                  00000000000           0012334578


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      +++.+||.+||+.||++||++.++++||||.....+
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~  271 (286)
T cd06622         236 DDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA  271 (286)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence            999999999999999999999999999999877544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.91  E-value=2.2e-23  Score=183.43  Aligned_cols=114  Identities=30%  Similarity=0.495  Sum_probs=98.5

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |.+.+.||.|+||.||+|.+..+++.+|+|.+....      ..+.+|+.+++.++||||+++++++...   ....+++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence            678999999999999999999999999999997542      3467899999999999999999998432   1256899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++++|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        78 v~e~~~~~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~  120 (287)
T cd07840          78 VFEYMDHDLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSNG  120 (287)
T ss_pred             EeccccccHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999988887652   247999999999999999999999988

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.91  E-value=2.2e-23  Score=183.16  Aligned_cols=113  Identities=35%  Similarity=0.540  Sum_probs=97.5

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++.+.||.|+||.||+|....+++.||||.+....     ....+|+..++.++ ||||+++++++     ......|+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-----~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF-----RENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh-----hcCCcEEE
Confidence            678899999999999999999899999999986432     23457999999998 99999999999     44566899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+.|+|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus        76 v~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~  119 (283)
T cd07830          76 VFEYMEGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKHG  119 (283)
T ss_pred             EEecCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999889988887632  246899999999999999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.91  E-value=1.7e-23  Score=181.15  Aligned_cols=114  Identities=27%  Similarity=0.402  Sum_probs=101.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ++|++.+.||.|+||.||+|..+.+++.||+|.+...  ...+.+|+.+++.++||||+++++++     ....++|+++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~l~~   77 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSY-----FKNTDLWIVM   77 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCcEEEEE
Confidence            4699999999999999999999988999999998654  35678999999999999999999999     4456699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+++ +|.+++...   ...+++..++.++.||+.||.|||+.+
T Consensus        78 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~  119 (256)
T cd06612          78 EYCGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSNK  119 (256)
T ss_pred             ecCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996 999988642   356899999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=6.4e-25  Score=199.56  Aligned_cols=192  Identities=26%  Similarity=0.406  Sum_probs=140.6

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEec------c--cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL------Q--DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~------~--~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +...+||+|+|-+||+|.|..+|..||.-.++      .  ...++..|+++|+.|+|||||++|++|.+..   ..++.
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in  119 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTIN  119 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceee
Confidence            34678999999999999999999999976553      1  2267889999999999999999999997643   35588


Q ss_pred             EEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------cChHHhH--
Q 019844          157 LVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------VDQLVEI--  210 (335)
Q Consensus       157 iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------~~~~~~~--  210 (335)
                      +|+|++. |+|..+.+.    +++++...++.|++||+.||.|||++.                       +..+...  
T Consensus       120 ~iTEL~TSGtLr~Y~kk----~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl  195 (632)
T KOG0584|consen  120 FITELFTSGTLREYRKK----HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL  195 (632)
T ss_pred             eeeecccCCcHHHHHHH----hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHH
Confidence            9999998 699999887    678999999999999999999999987                       1111111  


Q ss_pred             ------hhhcCCCCHHHhhhhCCCCCC----------------CCCCCC----CCCcccc--------ccccCCChHHHH
Q 019844          211 ------IKVLGTPTREEIKCMNPNYTE----------------FKFPQI----KPHPWHK--------VFQKRLPPEAVD  256 (335)
Q Consensus       211 ------~~~~g~~~~~~~~~~~~~~~~----------------~~~~~~----~~~~~~~--------~~~~~~s~~~~~  256 (335)
                            ..+.|||..........+|.+                ..+|..    .+..+..        -+..--.+++++
T Consensus       196 ~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~  275 (632)
T KOG0584|consen  196 LRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVRE  275 (632)
T ss_pred             hhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHH
Confidence                  124677763222221122221                111111    0111111        111234689999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ||.+||.. .++|+|+.|+|+||||+.-
T Consensus       276 fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  276 FIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHHhcC-chhccCHHHHhhChhhccc
Confidence            99999998 9999999999999999874

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=2.4e-24  Score=188.85  Aligned_cols=193  Identities=21%  Similarity=0.295  Sum_probs=136.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .|...+.||+|+||.||+|.+..+++.||+|.+....     ..+.+|+.+++.++||||+++++++     ....++|+
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   79 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLWI   79 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceEE
Confidence            4778899999999999999999999999999986432     3467899999999999999999999     45556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcCh-------------HHhHhhhc---------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQ-------------LVEIIKVL---------  214 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~~-------------~~~~~~~~---------  214 (335)
                      ||||++| +|.+++.     .+.+++..++.++.||+.||.|||++++-.             ....+..+         
T Consensus        80 v~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  154 (277)
T cd06642          80 IMEYLGGGSALDLLK-----PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT  154 (277)
T ss_pred             EEEccCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCc
Confidence            9999996 9988875     356899999999999999999999988100             00000111         


Q ss_pred             --------CCC---CHHHhhhhCCCCC--------------CCCCC--CCCC--------CccccccccCCChHHHHHHH
Q 019844          215 --------GTP---TREEIKCMNPNYT--------------EFKFP--QIKP--------HPWHKVFQKRLPPEAVDLVC  259 (335)
Q Consensus       215 --------g~~---~~~~~~~~~~~~~--------------~~~~~--~~~~--------~~~~~~~~~~~s~~~~~li~  259 (335)
                              |+.   .++.+........              ....+  ....        .......+..++.++.++|.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  234 (277)
T cd06642         155 QIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVE  234 (277)
T ss_pred             chhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHH
Confidence                    111   1111110000000              00000  0000        00011122356788999999


Q ss_pred             HhccCCCCCCCCHHHHhcCcccccCC
Q 019844          260 RFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       260 ~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +||+.+|++||++.++++||||..+.
T Consensus       235 ~~l~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06642         235 ACLNKDPRFRPTAKELLKHKFITRYT  260 (277)
T ss_pred             HHccCCcccCcCHHHHHHhHHHHHHh
Confidence            99999999999999999999998754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.91  E-value=1.8e-23  Score=183.42  Aligned_cols=193  Identities=24%  Similarity=0.284  Sum_probs=134.8

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||+|+||+||+|.+..+|+.||+|.+.+.       ...+.+|+.+++.++||||+++++++     ....++|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence            69999999999999999999999998642       12346799999999999999999999     5556689999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcCh-------------HHhHhhhcC-------------
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVDQ-------------LVEIIKVLG-------------  215 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~~-------------~~~~~~~~g-------------  215 (335)
                      +| +|.+++....  ...+++..++.++.|++.||.|||++++-.             ....+..+|             
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  153 (277)
T cd05577          76 NGGDLKYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKG  153 (277)
T ss_pred             CCCcHHHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccc
Confidence            96 9998887632  236999999999999999999999998100             000000111             


Q ss_pred             ---C---CCHHHhhhhCC------------------CCCCCCCCCC--C-------CCccccccccCCChHHHHHHHHhc
Q 019844          216 ---T---PTREEIKCMNP------------------NYTEFKFPQI--K-------PHPWHKVFQKRLPPEAVDLVCRFF  262 (335)
Q Consensus       216 ---~---~~~~~~~~~~~------------------~~~~~~~~~~--~-------~~~~~~~~~~~~s~~~~~li~~~L  262 (335)
                         +   ..++.+.....                  +..++.....  .       .......++..+++.+.++|.+||
T Consensus       154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  233 (277)
T cd05577         154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALL  233 (277)
T ss_pred             ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHc
Confidence               0   11111110000                  0000000000  0       000011233567899999999999


Q ss_pred             cCCCCCCC-----CHHHHhcCcccccCCCCCC
Q 019844          263 QYSPNLRC-----TALEACVHPFFDELRDPNT  289 (335)
Q Consensus       263 ~~dP~~R~-----t~~~~L~hp~f~~~~~~~~  289 (335)
                      +.||.+||     ++.++++||||..+.+...
T Consensus       234 ~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~  265 (277)
T cd05577         234 QKDPEKRLGCRGGSADEVREHPLFKDLNWRRL  265 (277)
T ss_pred             cCChhHccCCCcccHHHHHhChhhhcCChhhh
Confidence            99999999     8999999999998776433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=5.9e-26  Score=185.16  Aligned_cols=203  Identities=28%  Similarity=0.393  Sum_probs=149.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc--cc----hhHHHHHHHHHhCCCCceeeeceeeeeCC---CCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ--DK----RYKNRELQIMQMLDHPNIVALKHCFFSTT---DKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~--~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~---~~~~  152 (335)
                      ..|....+||+|.||.||+|+.+.+|+.||+|++--  +.    ....+|+.+|..|+|+|++.+++.+-+..   ..+.
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            358889999999999999999999999999987632  11    34579999999999999999988875432   2345


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      ..+|+||++|+.||..++...   ..+|+..+++.++.+++.||.|+|.+.                             
T Consensus        97 ~t~ylVf~~cehDLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen   97 ATFYLVFDFCEHDLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             ceeeeeHHHhhhhHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence            568999999999999998752   367999999999999999999999876                             


Q ss_pred             -------------------------------------------------------------cChHHhHhhhcCCCCHHHh
Q 019844          204 -------------------------------------------------------------VDQLVEIIKVLGTPTREEI  222 (335)
Q Consensus       204 -------------------------------------------------------------~~~~~~~~~~~g~~~~~~~  222 (335)
                                                                                   ..++..|..+||...++.|
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW  253 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW  253 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence                                                                         2334445555666665555


Q ss_pred             hhhC--CCCCCCCCCCCCCCcccc---c-cccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          223 KCMN--PNYTEFKFPQIKPHPWHK---V-FQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       223 ~~~~--~~~~~~~~~~~~~~~~~~---~-~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      ....  |-|.....+......++.   . -|-.-++++.||+.+||..||.+|+.++++|+|.||..-..|
T Consensus       254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence            4331  112111111111111111   0 112236789999999999999999999999999999865444

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.91  E-value=6e-24  Score=191.02  Aligned_cols=109  Identities=19%  Similarity=0.359  Sum_probs=93.6

Q ss_pred             eeeecc--CceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTG--SFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G--~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ..||+|  +||+||+|.+..+|+.||+|++....      +.+.+|+.+++.++||||++++++|     ....++|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~-----~~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVF-----TTGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeE-----ecCCceEEEE
Confidence            456666  99999999999999999999986322      4567899999999999999999999     5556689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+.+ +|.+++....  ...+++..++.++.||+.||+|||+++
T Consensus        79 e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~  121 (328)
T cd08226          79 PFMAYGSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQNG  121 (328)
T ss_pred             ecccCCCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99996 9999888643  345899999999999999999999988

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.91  E-value=1.5e-23  Score=187.46  Aligned_cols=112  Identities=29%  Similarity=0.476  Sum_probs=96.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcE-EEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc-E
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEI-VAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL-Y  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~-vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~-~  154 (335)
                      ...+.+.||.|+||+||++.++  |.. ||+|++...      .+.+.+|+.+|.+++|||||++++++.     +.. .
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~-----~~~~~  114 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACT-----SPPGS  114 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCc
Confidence            3566777999999999999996  555 999999643      247889999999999999999999994     333 5


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||||++ |+|.+++...  ....++...+..|+.||++||+|||+++
T Consensus       115 ~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~  162 (362)
T KOG0192|consen  115 LCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEG  162 (362)
T ss_pred             eEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            889999999 5999999864  2577999999999999999999999998

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=1.8e-23  Score=197.64  Aligned_cols=119  Identities=18%  Similarity=0.212  Sum_probs=89.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCc-EEEEE------------------Eecc---cchhHHHHHHHHHhCCCCce
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGE-IVAIK------------------KVLQ---DKRYKNRELQIMQMLDHPNI  137 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-~vAvK------------------~i~~---~~~~~~~Ei~~l~~l~hpnI  137 (335)
                      ...+|++++.||+|+||+||+|..+.... ..++|                  .+..   ....+.+|+.+|+.++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            34679999999999999999998653322 22222                  1111   11346789999999999999


Q ss_pred             eeeceeeeeCCCCCccEEEEEeecchhhHHHHHHHHh-hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYS-RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       138 v~~~~~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |++++++     ....+.|+||+++.++|..++.... ..........++.|+.||+.||.|||+++
T Consensus       226 v~l~~~~-----~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g  287 (501)
T PHA03210        226 LKIEEIL-----RSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK  287 (501)
T ss_pred             CcEeEEE-----EECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999     5555689999999988887775421 11223456778899999999999999998

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.91  E-value=7.2e-23  Score=182.34  Aligned_cols=120  Identities=27%  Similarity=0.443  Sum_probs=101.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC---CC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD---KE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~---~~  151 (335)
                      .++|.+.+.||.|+||.||+|.++.+++.+|||++...      .....+|+.+++.++||||+++++++.....   ..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46799999999999999999999999999999998532      1245789999999999999999998864332   23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|+||||+.++|...+...   ...+++..++.++.||+.||.|||+++
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~  135 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHENH  135 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4568999999998887766542   356999999999999999999999988

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=2.7e-24  Score=202.04  Aligned_cols=189  Identities=23%  Similarity=0.316  Sum_probs=136.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +....+.||+|+||+||+|+..     .....||||.++...     ..++||+++|..|+|||||+++|++     ..+
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC-----~~~  561 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC-----REG  561 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----ccC
Confidence            4667899999999999999864     234579999997533     5688999999999999999999999     455


Q ss_pred             cEEEEEeecch-hhHHHHHHHHhhh----------cCCCCHHHHHHHHHHHHHHHHHHHhCC-------------cChHH
Q 019844          153 LYLNLVLEYVP-ETVNRIARNYSRI----------HQRMPLIYVKLYTYQICRALAYIHNCI-------------VDQLV  208 (335)
Q Consensus       153 ~~~~iv~e~~~-g~L~~~l~~~~~~----------~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------~~~~~  208 (335)
                      .-+|+|+|||. |||.++|......          ...++..+...|+.||+.||.||-++.             .+++.
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~  641 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV  641 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence            55999999999 7999999864321          123889999999999999999999887             11111


Q ss_pred             hHhhhcCCC--------------CHHHhhhhCCCCCCCCCCCCCCCccc-------------------------------
Q 019844          209 EIIKVLGTP--------------TREEIKCMNPNYTEFKFPQIKPHPWH-------------------------------  243 (335)
Q Consensus       209 ~~~~~~g~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------  243 (335)
                      ..+..+|-.              +...+.+|.|+-..|.-...+.+.|.                               
T Consensus       642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g  721 (774)
T KOG1026|consen  642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAG  721 (774)
T ss_pred             EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcC
Confidence            122222211              11123344443322222222222222                               


Q ss_pred             --cccccCCChHHHHHHHHhccCCCCCCCCHHHHh
Q 019844          244 --KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEAC  276 (335)
Q Consensus       244 --~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L  276 (335)
                        ...|..+|.++++|+..||+.+|.+||++.||=
T Consensus       722 ~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  722 QLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             CcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence              124678999999999999999999999999873

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.91  E-value=1.4e-23  Score=184.04  Aligned_cols=112  Identities=30%  Similarity=0.465  Sum_probs=100.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +|.+.+.||+|+||.||+|.++.+++.||+|++.+.       ...+.+|+.+++.++ ||||+++++++     .....
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~   76 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEEN   76 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCce
Confidence            599999999999999999999999999999998642       234678999999998 99999999998     55566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++||||+.+ +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        77 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~~  122 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSKG  122 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999999974 99999886    557999999999999999999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=1.3e-23  Score=184.20  Aligned_cols=111  Identities=21%  Similarity=0.341  Sum_probs=98.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .|+..+.||.|+||.||+|.+..++..||+|++....     ..+.+|+.+++.++||||+++++++     .+..++|+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   79 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKGTKLWI   79 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCEEEE
Confidence            4888999999999999999999999999999986432     3467899999999999999999999     55566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++| +|.+++..     +.+++..+..++.|++.||+|||+.+
T Consensus        80 v~e~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~  121 (277)
T cd06640          80 IMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSEK  121 (277)
T ss_pred             EEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996 99888863     46899999999999999999999988

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.91  E-value=7e-23  Score=177.09  Aligned_cols=114  Identities=32%  Similarity=0.521  Sum_probs=99.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||+|++|.||+|.+..+++.|++|++....      ..+.+|+.++++++||||+++++.+....   ...++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence            4889999999999999999999999999999986432      45778999999999999999999984321   26689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++ +|.+++..    ...+++..++.++.|++.||.|||+.+
T Consensus        78 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~  121 (260)
T cd06606          78 IFLEYVSGGSLSSLLKK----FGKLPEPVIRKYTRQILEGLAYLHSNG  121 (260)
T ss_pred             EEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999975 99999886    447999999999999999999999988

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.91  E-value=9.3e-24  Score=181.60  Aligned_cols=116  Identities=22%  Similarity=0.356  Sum_probs=102.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCC--C----ceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDH--P----NIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~h--p----nIv~~~~~~~~~~~~~  151 (335)
                      ..+|.+.+.+|+|+||.|-.|.+..++..||||+|+.-   .....-|+++|.++.+  |    -+|++.+||     ..
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF-----dy  162 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF-----DY  162 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-----hc
Confidence            56799999999999999999999999999999998642   3456789999999942  3    388999999     88


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++|||+|.++-+++++|..+.  ..+++...++.|++||+.+++|||+++
T Consensus       163 rghiCivfellG~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh~~k  212 (415)
T KOG0671|consen  163 RGHICIVFELLGLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLHDLK  212 (415)
T ss_pred             cCceEEEEeccChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHHhcc
Confidence            88899999999999999999755  567999999999999999999999988

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=3.4e-23  Score=183.13  Aligned_cols=113  Identities=26%  Similarity=0.326  Sum_probs=99.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|.+.+.||.|+||.||++.+..++..||+|.+...    ...+.+|+.+++.++||||+++++++     ......|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY-----LVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhhee-----eeCCcEE
Confidence            35799999999999999999999889999999998532    24567899999999999999999998     4455689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||++| +|.+++..     ..+++..+..++.|++.||.|||+++
T Consensus        93 lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~g  135 (293)
T cd06647          93 VVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ  135 (293)
T ss_pred             EEEecCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 99988864     45889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=3.7e-23  Score=180.39  Aligned_cols=112  Identities=25%  Similarity=0.384  Sum_probs=95.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.....||+|+||.||+|.+..++..||+|.+...    .+.+.+|+.+++.++|+||+++++++     ....++++||
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~   84 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD-----SENGFFKIFM   84 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee-----ccCCEEEEEE
Confidence            33456899999999999999999999999988643    24577999999999999999999998     5556799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCC--CHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRM--PLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l--~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||++| +|.+++...   ...+  ++..+..++.||+.||.|||+++
T Consensus        85 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~  128 (268)
T cd06624          85 EQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDNQ  128 (268)
T ss_pred             ecCCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996 999988752   2345  88889999999999999999988

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.91  E-value=5.9e-23  Score=178.85  Aligned_cols=114  Identities=25%  Similarity=0.400  Sum_probs=98.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|++.+.||+|+||.||.|.+..+++.||||.+...         ...+.+|+.+++.++||||+++++++..   ....
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~   79 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PMER   79 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCCc
Confidence            599999999999999999999999999999988521         1346689999999999999999998732   2234


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++++|||++| +|.+++..    ...+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (265)
T cd06652          80 TLSIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSNM  126 (265)
T ss_pred             eEEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68899999986 99998875    556899999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=1.4e-23  Score=184.74  Aligned_cols=112  Identities=25%  Similarity=0.340  Sum_probs=98.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ++|++.+.||+|+||+||++.+..+++.||+|++...     ...+.+|+++++.++||||+++++++     ....++|
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAF-----LNENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeE-----ecCCEEE
Confidence            4699999999999999999999999999999987533     24567899999999999999999999     4556799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +||||+++ +|.+++..    .+.+++..++.++.|++.||.|||+.
T Consensus        80 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~  122 (284)
T cd06620          80 MCMEFMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNV  122 (284)
T ss_pred             EEEecCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999996 99888875    56799999999999999999999963

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.90  E-value=7.5e-23  Score=177.86  Aligned_cols=112  Identities=24%  Similarity=0.453  Sum_probs=99.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+...      ...+.+|+.+++.++|+||+++++++     .....++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence            589999999999999999999889999999998643      23567899999999999999999988     5556689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||+++ +|.+++..    ...+++..++.++.|++.||.|||+.+
T Consensus        76 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~  119 (264)
T cd06626          76 IFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSHG  119 (264)
T ss_pred             EEEecCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHCC
Confidence            99999996 99998875    556899999999999999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.90  E-value=5.4e-23  Score=179.18  Aligned_cols=117  Identities=26%  Similarity=0.476  Sum_probs=101.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+|++.+.||+|+||.||+|+++.+++.||||.+...       ...+.+|+.+++.++||||+++++++.     ....
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence            4699999999999999999999999999999987531       134678999999999999999999984     4456


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++||||+++ +|.+++.........+++..++.++.||+.||.|||+++
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR  126 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            8899999996 999998765544566899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.90  E-value=6.6e-23  Score=177.48  Aligned_cols=114  Identities=25%  Similarity=0.368  Sum_probs=99.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +|++.+.||.|+||.||++.+..+++.||+|.+...     ...+.+|+.+++.++||||+++++++     ....++|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence            489999999999999999999999999999998532     24567899999999999999999999     55667999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+++ +|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        76 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~  120 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHEKR  120 (255)
T ss_pred             EEeeCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999985 9988886532  456899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.90  E-value=1.3e-23  Score=185.80  Aligned_cols=198  Identities=24%  Similarity=0.262  Sum_probs=138.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +.|.....||+|+||.||++.+..++..||||.+...    ...+.+|+.+++.++||||+++++.+     ....+.|+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~-----~~~~~~~l   96 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY-----LVGDELWV   96 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe-----ecCCeEEE
Confidence            3466778899999999999999999999999998542    24567899999999999999999998     45556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh----------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV----------  213 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~----------  213 (335)
                      ||||++| +|.+++.     .+.+++..++.++.||+.||.|||++++            + .....+..          
T Consensus        97 v~e~~~~~~L~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (292)
T cd06658          97 VMEFLEGGALTDIVT-----HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE  171 (292)
T ss_pred             EEeCCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence            9999996 8888775     3568999999999999999999999881            0 00000001          


Q ss_pred             -------cCCCC---HHHhhhhCCCCCC--------------CCCCCCCCCc------------cccccccCCChHHHHH
Q 019844          214 -------LGTPT---REEIKCMNPNYTE--------------FKFPQIKPHP------------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       214 -------~g~~~---~~~~~~~~~~~~~--------------~~~~~~~~~~------------~~~~~~~~~s~~~~~l  257 (335)
                             .|++.   ++...........              ...+......            .........++.+.++
T Consensus       172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (292)
T cd06658         172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGF  251 (292)
T ss_pred             cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHH
Confidence                   11111   1111000000000              0000000000            0000112468889999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      |.+||..||.+|||+.++++||||.....|..
T Consensus       252 i~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~  283 (292)
T cd06658         252 LDLMLVREPSQRATAQELLQHPFLKLAGPPSC  283 (292)
T ss_pred             HHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence            99999999999999999999999998877664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.90  E-value=1.9e-23  Score=181.47  Aligned_cols=105  Identities=30%  Similarity=0.452  Sum_probs=93.4

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||.|+||.||+|.+..+++.+|+|.+....       ..+.+|+.+++.++||||+++++.+     .....+|++|||+
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence            689999999999999899999999986432       3467899999999999999999998     5566689999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .| +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        76 ~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~lH~~~  113 (265)
T cd05579          76 PGGDLASLLEN----VGSLDEDVARIYIAEIVLALEYLHSNG  113 (265)
T ss_pred             CCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            86 99999876    457999999999999999999999988

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=9.9e-23  Score=175.92  Aligned_cols=112  Identities=32%  Similarity=0.585  Sum_probs=100.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|.+.+.||+|++|.||++.+..+++.||+|.+....      ..+.+|+++++.++||||+++++++     .....++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSI-----ETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEE-----EeCCEEE
Confidence            4899999999999999999999999999999986443      3467899999999999999999998     4456689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||+++ +|.+++..    ...+++..++.++.|++.||.|||+++
T Consensus        76 ~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~  119 (254)
T cd06627          76 IILEYAENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQG  119 (254)
T ss_pred             EEEecCCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99999996 99998876    467999999999999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.90  E-value=1.7e-22  Score=177.75  Aligned_cols=118  Identities=29%  Similarity=0.438  Sum_probs=97.9

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhC---CCCceeeeceeeeeCCCCCccE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQML---DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      |++.+.||+|+||.||+|.++.+++.||+|.+....      ..+.+|+.+++.+   +||||+++++++..........
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            678999999999999999998889999999996321      2355788877766   5999999999996544334445


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++|||+.++|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~  127 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSHR  127 (287)
T ss_pred             eEEEehhcccCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            89999999999988887532  235899999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.90  E-value=2.8e-23  Score=184.96  Aligned_cols=114  Identities=28%  Similarity=0.420  Sum_probs=98.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+|.+.+.||+|+||.||+|.+..+++.||+|++....       ..+.+|+.+++.++||||+++++++.     ....
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~-----~~~~   89 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYL-----REHT   89 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEE-----eCCe
Confidence            45999999999999999999999999999999985321       34678999999999999999999994     4445


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|+||||+.|+|.+++...   ...+++..+..++.||+.||.|||+.+
T Consensus        90 ~~lv~e~~~g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~~  135 (307)
T cd06607          90 AWLVMEYCLGSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSHE  135 (307)
T ss_pred             EEEEHHhhCCCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999999887777542   356899999999999999999999988

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.90  E-value=6e-23  Score=192.73  Aligned_cols=203  Identities=22%  Similarity=0.315  Sum_probs=152.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...+.|++.++||.|.+|.||+++.+.+++..|+|+...+   ...+..|..+|+.+ +|||++.+|++|+-.......-
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq   95 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ   95 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence            3445699999999999999999999999999999987543   35567788899888 7999999999999777677778


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      +|||||||.| +..++++...  ..++.|..+.+|++.++.||.+||.+.                              
T Consensus        96 LWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl  173 (953)
T KOG0587|consen   96 LWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  173 (953)
T ss_pred             EEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence            9999999995 9999999866  788999999999999999999999876                              


Q ss_pred             cChHHhHhhhcCCCCHH---HhhhhC---CCCCC----C-----------------------CCCCCCCCcc-ccccccC
Q 019844          204 VDQLVEIIKVLGTPTRE---EIKCMN---PNYTE----F-----------------------KFPQIKPHPW-HKVFQKR  249 (335)
Q Consensus       204 ~~~~~~~~~~~g~~~~~---~~~~~~---~~~~~----~-----------------------~~~~~~~~~~-~~~~~~~  249 (335)
                      ......-.+..|||.+.   .+.|..   +.|..    +                       .+..+.+.|- ...-|..
T Consensus       174 dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~k  253 (953)
T KOG0587|consen  174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKK  253 (953)
T ss_pred             ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhh
Confidence            01112223446776632   222221   11110    0                       0001111111 1112456


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      .+.++.+||..||..|-.+||+..++|.|||+.+
T Consensus       254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  254 WSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            7889999999999999999999999999999874

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=6e-23  Score=178.23  Aligned_cols=107  Identities=26%  Similarity=0.398  Sum_probs=89.7

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHH-HhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIM-QMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l-~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||.|+||.||+|.+..+++.||+|++.+..       .....|..++ ..++|+||+++++++     ....++|+||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF-----QSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE-----EcCCeEEEEE
Confidence            57999999999999999999999999986432       1233454444 445899999999999     5556799999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||++| +|.+++..    .+.+++..+..++.||+.||.|||+.+
T Consensus        77 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~  117 (260)
T cd05611          77 EYLNGGDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQRG  117 (260)
T ss_pred             eccCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99986 99999876    567999999999999999999999988

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.90  E-value=5.4e-23  Score=179.31  Aligned_cols=114  Identities=20%  Similarity=0.232  Sum_probs=97.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|++.+.||+|+||.||+|.++   ..+..||+|.+....     ..+.+|+.+++.++||||+++++++     ....
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~   79 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVI-----TRGN   79 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----ecCC
Confidence            35999999999999999999875   456689999986432     3467899999999999999999998     4455


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|+||||+++ +|.+++...   ...+++..++.++.||+.||+|||+++
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~~  127 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEMG  127 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            68999999996 999888752   346899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.90  E-value=2.8e-23  Score=187.48  Aligned_cols=119  Identities=19%  Similarity=0.322  Sum_probs=96.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|++.+.||+|+||.||+|.+.     .+++.||+|++...     ...+.+|+.+++.+ +|||||++++++..   
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   82 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK---   82 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC---
Confidence            457999999999999999999852     44578999998642     24577899999999 89999999998842   


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhh----------------------------------------------------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRI----------------------------------------------------  176 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~----------------------------------------------------  176 (335)
                       ....+|+|||||+| +|.+++......                                                    
T Consensus        83 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          83 -PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             -CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence             23348899999995 999998753210                                                    


Q ss_pred             ------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          177 ------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       177 ------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                            ...+++..+..++.||+.||.|||+++
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~  194 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRK  194 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                  134788899999999999999999998

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=9.6e-23  Score=178.62  Aligned_cols=111  Identities=25%  Similarity=0.436  Sum_probs=97.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCC---CCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLD---HPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .|++.+.||.|+||.||+|.+..+++.||+|.+...     ...+.+|+.+++.++   ||||+++++++     ....+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~-----~~~~~   76 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSY-----LKGPR   76 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeee-----eeCCE
Confidence            388899999999999999999999999999998642     235678999999996   99999999998     45556


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||||++| +|.+++..     +.+++..++.++.|++.||.|||+.+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~  121 (277)
T cd06917          77 LWIIMEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVG  121 (277)
T ss_pred             EEEEEecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8999999986 99888764     46899999999999999999999988

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.90  E-value=4e-23  Score=183.04  Aligned_cols=197  Identities=22%  Similarity=0.270  Sum_probs=137.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      |.....||+|+||.||+|.+..+++.||+|++...    ...+.+|+.+++.++||||+++++++     ....++|+||
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~iv~   97 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY-----LVGEELWVLM   97 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhe-----eeCCeEEEEE
Confidence            55566899999999999999999999999998532    24567899999999999999999998     4455689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--------hHHh---------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--------QLVE---------  209 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--------~~~~---------  209 (335)
                      ||+++ +|..++..     ..+++..++.++.||+.||.|||++++            +        .+..         
T Consensus        98 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~  172 (297)
T cd06659          98 EFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  172 (297)
T ss_pred             ecCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence            99996 88887653     568999999999999999999999881            0        0000         


Q ss_pred             -HhhhcCCCC---HHHhhhhCC------------------CCCCCCCCC-------CCCC-ccccccccCCChHHHHHHH
Q 019844          210 -IIKVLGTPT---REEIKCMNP------------------NYTEFKFPQ-------IKPH-PWHKVFQKRLPPEAVDLVC  259 (335)
Q Consensus       210 -~~~~~g~~~---~~~~~~~~~------------------~~~~~~~~~-------~~~~-~~~~~~~~~~s~~~~~li~  259 (335)
                       .....|++.   ++.+.....                  ...++....       .... ......+..+++.+.++|.
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  252 (297)
T cd06659         173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLE  252 (297)
T ss_pred             cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHH
Confidence             000111111   111110000                  000000000       0000 0000112357889999999


Q ss_pred             HhccCCCCCCCCHHHHhcCcccccCCCCCCC
Q 019844          260 RFFQYSPNLRCTALEACVHPFFDELRDPNTR  290 (335)
Q Consensus       260 ~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~  290 (335)
                      +||+.||.+||++.++++||||.+...|...
T Consensus       253 ~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~  283 (297)
T cd06659         253 RMLTREPQERATAQELLDHPFLLQTGLPECL  283 (297)
T ss_pred             HHhcCCcccCcCHHHHhhChhhccCCCcccc
Confidence            9999999999999999999999988766553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.90  E-value=1.6e-22  Score=178.15  Aligned_cols=196  Identities=24%  Similarity=0.299  Sum_probs=136.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .|...+.||+|++|.||++.+..+++.+|+|++...    .+.+.+|+.+++.++||||+++++++     ....+.|+|
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~-----~~~~~~~~v   94 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSY-----LVGDELWVV   94 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEE-----EcCCeEEEE
Confidence            466678999999999999999999999999988532    23467899999999999999999998     445568999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh-----------
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV-----------  213 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~-----------  213 (335)
                      +||+.| +|.+++..     ..+++..+..++.||+.||.|||++++            +. ....+..           
T Consensus        95 ~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~  169 (285)
T cd06648          95 MEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV  169 (285)
T ss_pred             EeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence            999986 99888874     458999999999999999999999881            00 0000001           


Q ss_pred             ------cCCCC---HHHhhhhCCCC--CCC------------CCCCCCCC------------ccccccccCCChHHHHHH
Q 019844          214 ------LGTPT---REEIKCMNPNY--TEF------------KFPQIKPH------------PWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       214 ------~g~~~---~~~~~~~~~~~--~~~------------~~~~~~~~------------~~~~~~~~~~s~~~~~li  258 (335)
                            .|++.   ++.........  .-|            ..+.....            ......+..++..+.+||
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  249 (285)
T cd06648         170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFL  249 (285)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHH
Confidence                  11111   11110000000  000            00000000            000011123778999999


Q ss_pred             HHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          259 CRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       259 ~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      ++||+.||++|||+.++++||||.....|.
T Consensus       250 ~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~  279 (285)
T cd06648         250 DRMLVRDPAQRATAAELLNHPFLAKAGPPS  279 (285)
T ss_pred             HHHcccChhhCcCHHHHccCcccccCCCcc
Confidence            999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.90  E-value=1.1e-22  Score=181.59  Aligned_cols=114  Identities=28%  Similarity=0.446  Sum_probs=98.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +.|...+.||+|+||+||+|++..+++.||+|++....       ..+.+|+.+++.++||||+++++++     .....
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~   95 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCY-----LKEHT   95 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEE-----EeCCE
Confidence            34777889999999999999999999999999986321       3466899999999999999999999     44556


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|+||||+.|+|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus        96 ~~lv~e~~~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~g  141 (313)
T cd06633          96 AWLVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHN  141 (313)
T ss_pred             EEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999999999888777642   456899999999999999999999998

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.90  E-value=1e-22  Score=178.89  Aligned_cols=188  Identities=22%  Similarity=0.282  Sum_probs=128.1

Q ss_pred             eeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHH---hCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQ---MLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~---~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .||+|+||.||++.+..+++.+|+|.+.+..       ....+|..+++   ..+||||+.+++++     .....+|+|
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF-----HTPDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE-----ecCCeEEEE
Confidence            4899999999999999999999999885421       12334444333   34799999999999     445568999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC-------------hHHhHhhh-----------
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD-------------QLVEIIKV-----------  213 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~-------------~~~~~~~~-----------  213 (335)
                      |||++| +|..++..    .+.+++..+..|+.||+.||.|||++++-             .....+..           
T Consensus        76 ~e~~~~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~  151 (279)
T cd05633          76 LDLMNGGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK  151 (279)
T ss_pred             EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC
Confidence            999996 99888875    56799999999999999999999998810             00000011           


Q ss_pred             ----cCCCC---HHHhhhhCCCCCC------------------CCCCCCCCC----------ccccccccCCChHHHHHH
Q 019844          214 ----LGTPT---REEIKCMNPNYTE------------------FKFPQIKPH----------PWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       214 ----~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~~----------~~~~~~~~~~s~~~~~li  258 (335)
                          .|++.   ++..... ..+..                  ..+......          .....++..+++++.++|
T Consensus       152 ~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  230 (279)
T cd05633         152 PHASVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLL  230 (279)
T ss_pred             ccCcCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHH
Confidence                12221   1111100 00000                  000000000          011123456789999999


Q ss_pred             HHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .+||+.||.+|+     ++.++++||||+.+..
T Consensus       231 ~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         231 EGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             HHHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence            999999999999     6999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.7e-23  Score=186.26  Aligned_cols=201  Identities=22%  Similarity=0.259  Sum_probs=138.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+..|+++++||+||.+.||++.. .+...||+|.+...      ..-+..|+.+|.+| +|.+||++|||-     -.+
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~-s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d  432 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLN-SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTD  432 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeec-CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccC
Confidence            345799999999999999999997 44566777766421      24467999999999 599999999998     667


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------cChHHhH---------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------VDQLVEI---------  210 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------~~~~~~~---------  210 (335)
                      .++||||||-+.||..+|...   ..-++...+++|..||+.|+.++|.+|             +....++         
T Consensus       433 ~~lYmvmE~Gd~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI  509 (677)
T KOG0596|consen  433 GYLYMVMECGDIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAI  509 (677)
T ss_pred             ceEEEEeecccccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhccc
Confidence            889999999999999999873   233444689999999999999999999             0100000         


Q ss_pred             ---------hhhcCCCCH---HHhhhhC--------------------------------CCCCCCC-----CCCCCCCc
Q 019844          211 ---------IKVLGTPTR---EEIKCMN--------------------------------PNYTEFK-----FPQIKPHP  241 (335)
Q Consensus       211 ---------~~~~g~~~~---~~~~~~~--------------------------------~~~~~~~-----~~~~~~~~  241 (335)
                               ...+||+.|   +.+.++.                                +.|..+.     +..+....
T Consensus       510 ~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~  589 (677)
T KOG0596|consen  510 QPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPN  589 (677)
T ss_pred             CccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCC
Confidence                     123455542   2222211                                1111110     00001111


Q ss_pred             cccccccCCCh-HHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          242 WHKVFQKRLPP-EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       242 ~~~~~~~~~s~-~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      -...||..-+. ++.++++.||.+||++|||+.++|+|||++-..-|..
T Consensus       590 ~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i~~~  638 (677)
T KOG0596|consen  590 HEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPIPVE  638 (677)
T ss_pred             ccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccccch
Confidence            11123333333 3999999999999999999999999999987544443

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.90  E-value=1.3e-22  Score=176.96  Aligned_cols=112  Identities=19%  Similarity=0.223  Sum_probs=91.3

Q ss_pred             eeeEEeeee--eccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVV--GTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~l--G~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ++|.+.+.+  |.|+||.||++.++.++..+|+|.+..... ...|+.+...+ +||||++++++|     .....+|+|
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~e~~~~~~~~~h~~iv~~~~~~-----~~~~~~~iv   87 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF-NAIEPMVHQLMKDNPNFIKLYYSV-----TTLKGHVLI   87 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc-chhhHHHHHHhhcCCCEEEEEEEE-----ecCCeeEEE
Confidence            346666665  999999999999999999999999865321 11244443333 799999999999     444569999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||++| +|.+++..    ...+++..++.++.||+.||.|||+.+
T Consensus        88 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~  129 (267)
T PHA03390         88 MDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKHN  129 (267)
T ss_pred             EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999985 99999876    457999999999999999999999998

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.89  E-value=8.5e-23  Score=180.53  Aligned_cols=196  Identities=23%  Similarity=0.303  Sum_probs=136.4

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      |....+||+|+||.||++....+++.||||.+...    ...+.+|+.+++.++|+||+++++++     ....+.|+||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~   96 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWVVM   96 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE-----EeCCEEEEEE
Confidence            55567899999999999999999999999988532    23467899999999999999999999     4556689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhhc-----------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKVL-----------  214 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~~-----------  214 (335)
                      ||+++ +|.+++.     ...+++..++.++.|++.||.|||++++            +. ....+..+           
T Consensus        97 e~~~~~~L~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~  171 (292)
T cd06657          97 EFLEGGALTDIVT-----HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  171 (292)
T ss_pred             ecCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc
Confidence            99996 8888765     3468999999999999999999999881            00 00000011           


Q ss_pred             ------CCC---CHHHhhhhCCCC--CCC------------CCCCCCCC------------ccccccccCCChHHHHHHH
Q 019844          215 ------GTP---TREEIKCMNPNY--TEF------------KFPQIKPH------------PWHKVFQKRLPPEAVDLVC  259 (335)
Q Consensus       215 ------g~~---~~~~~~~~~~~~--~~~------------~~~~~~~~------------~~~~~~~~~~s~~~~~li~  259 (335)
                            |++   .++.........  .-+            ..+.....            +........+++.+.++|.
T Consensus       172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (292)
T cd06657         172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLD  251 (292)
T ss_pred             cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHH
Confidence                  111   111110000000  000            00000000            0000011346889999999


Q ss_pred             HhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          260 RFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       260 ~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      +||+.||.+||++.++|+||||.....|..
T Consensus       252 ~~l~~~P~~R~~~~~ll~~~~~~~~~~~~~  281 (292)
T cd06657         252 RLLVRDPAQRATAAELLKHPFLAKAGPPSC  281 (292)
T ss_pred             HHHhCCcccCcCHHHHhcChHHhccCCCcc
Confidence            999999999999999999999998876553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.89  E-value=1.6e-22  Score=174.98  Aligned_cols=116  Identities=23%  Similarity=0.389  Sum_probs=101.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|++.+.||.|+||.||++.++.+++.+|+|.+...      ...+.+|+.+++.++|+||+++++++     ......|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF-----LDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh-----ccCCEEE
Confidence            489999999999999999999999999999998642      23456899999999999999999999     4446689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++.........+++..++.++.||+.||.|||+++
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~  123 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK  123 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            99999986 999998775544567999999999999999999999998

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.89  E-value=4.7e-23  Score=188.45  Aligned_cols=118  Identities=19%  Similarity=0.256  Sum_probs=97.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEE-----cCCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKC-----RETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|++++.||+|+||.||+|.+     ..++..||||+++..     ...+.+|+.+|+.+ +|||||++++++     
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~-----  108 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC-----  108 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee-----
Confidence            34799999999999999999974     346778999998642     23567899999999 899999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh-----------------------------------------------------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR-----------------------------------------------------  175 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~-----------------------------------------------------  175 (335)
                      ......++|||||+| +|.+++.....                                                     
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS  188 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence            555568899999995 99998865211                                                     


Q ss_pred             ------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          176 ------------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       176 ------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                                        ....+++..+..++.||+.||.|||+++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~  234 (375)
T cd05104         189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN  234 (375)
T ss_pred             cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence                              0124788899999999999999999988

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.89  E-value=2.6e-23  Score=175.03  Aligned_cols=239  Identities=23%  Similarity=0.338  Sum_probs=175.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCC-CC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~  151 (335)
                      ....||.-++.+|.|+- .|..+.|.-+++.||+|.+..      ..++..+|..++..++|+||++++.+|..... ..
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~   92 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEE   92 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHH
Confidence            44567999999999998 888999999999999998743      23567799999999999999999999965432 23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------  203 (335)
                      ...+|+|||||+.+|.+.+..      .++...+++|++|+++|++|||+.|                            
T Consensus        93 ~~e~y~v~e~m~~nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar  166 (369)
T KOG0665|consen   93 FQEVYLVMELMDANLCQVILM------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLAR  166 (369)
T ss_pred             HHhHHHHHHhhhhHHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhc
Confidence            344889999999999888763      3778889999999999999999998                            


Q ss_pred             --------------------------------------------------------cChHHhHhhhcCCCCHHHhhhhC-
Q 019844          204 --------------------------------------------------------VDQLVEIIKVLGTPTREEIKCMN-  226 (335)
Q Consensus       204 --------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~-  226 (335)
                                                                              ++++.++...+|+|.+.....+. 
T Consensus       167 ~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~  246 (369)
T KOG0665|consen  167 TEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQP  246 (369)
T ss_pred             ccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhH
Confidence                                                                    77888888889999866544332 


Q ss_pred             ---------CCCCCCCCCCC-CCCcccccc--ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCC
Q 019844          227 ---------PNYTEFKFPQI-KPHPWHKVF--QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG  294 (335)
Q Consensus       227 ---------~~~~~~~~~~~-~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~  294 (335)
                               |.|..+.+... +...|....  +..-+..++||+.+||..||++|.++.++|+||||+-+..+.. ..  
T Consensus       247 ~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~~~~e-v~--  323 (369)
T KOG0665|consen  247 TVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWYDPDE-VE--  323 (369)
T ss_pred             HHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeeccccc-cc--
Confidence                     33333322222 111222111  1234567899999999999999999999999999994433222 11  


Q ss_pred             CCCCC-CCCCCcccCCCCCHHHHhhcChHHHhhccc
Q 019844          295 RPLPP-LFNFKPPELSGIPPETINRLIPEHARKQNL  329 (335)
Q Consensus       295 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (335)
                      .+-|+ ...+  .+.+...+++|++.|.+|+..=+.
T Consensus       324 ap~pe~~d~~--~d~~~~t~~e~ke~If~ev~~f~~  357 (369)
T KOG0665|consen  324 APPPEIYDKQ--LDEREHTIEEWKELIFKEVQRFEE  357 (369)
T ss_pred             CCCCchhhhh--cccccCCHHHHHHHHHHHHHhhcc
Confidence            11222 2111  245666799999999999886433

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.89  E-value=2.3e-22  Score=177.15  Aligned_cols=116  Identities=28%  Similarity=0.357  Sum_probs=101.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..+.|.+.+.||.|+||.||+|.+..++..||+|++....   ..+.+|+.+++.++|+||+++++++     .....+|
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~   91 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSY-----LVGDELW   91 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEE-----EECCEEE
Confidence            3445999999999999999999999899999999997543   4567899999999999999999999     4445699


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||++| +|.+++....   ..+++..+..++.|++.||.|||+.|
T Consensus        92 lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~g  136 (286)
T cd06614          92 VVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQN  136 (286)
T ss_pred             EEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999995 9999998621   37999999999999999999999988

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=9.6e-23  Score=185.28  Aligned_cols=113  Identities=24%  Similarity=0.387  Sum_probs=95.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCc---E-EEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGE---I-VAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~-vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      +-.+.++||+|+||.||+|..+..+.   . ||+|..+.+       ...+.+|.++|+.++|||||++||+....    
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~----  233 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE----  233 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC----
Confidence            45567999999999999999875432   3 899988641       24577999999999999999999998443    


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .-++||||+|.| +|.++|+...   +.++..+...++.+.+.||+|||+++
T Consensus       234 -~Pl~ivmEl~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh~k~  282 (474)
T KOG0194|consen  234 -EPLMLVMELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLHSKN  282 (474)
T ss_pred             -CccEEEEEecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHHHCC
Confidence             339999999996 9999999732   35999999999999999999999998

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.89  E-value=2.9e-22  Score=174.44  Aligned_cols=117  Identities=30%  Similarity=0.530  Sum_probs=102.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.++.       ....+.+|+.++++++|+||+++++++     .....
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~-----~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASF-----IENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeee-----ecCCe
Confidence            469999999999999999999999999999998852       134577899999999999999999999     44456


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++||||++| +|.+++.........+++..++.++.||+.||.|||+.+
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  126 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR  126 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8999999996 999998765444566899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=1.8e-22  Score=178.10  Aligned_cols=119  Identities=18%  Similarity=0.228  Sum_probs=95.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ..++|++.+.||+|+||.||+|.++.     .+..||+|.+....     ..+.+|+.+++.++||||+++++++     
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVV-----   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence            34679999999999999999997652     34589999886332     2356899999999999999999998     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhh------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRI------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ......|+||||+++ +|.+++......      ...++...+..++.||+.||.|||+++
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK  139 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            444558899999985 999999763211      133567788999999999999999988

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.89  E-value=1e-22  Score=181.83  Aligned_cols=103  Identities=23%  Similarity=0.327  Sum_probs=86.4

Q ss_pred             CceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh-hH
Q 019844           94 SFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TV  166 (335)
Q Consensus        94 ~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L  166 (335)
                      ++|.||.++++.+++.||||++...      ...+.+|+.+++.++||||++++++|     .....+|++|||+++ +|
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEEEeccCCCCH
Confidence            4456677777779999999998643      14577999999999999999999999     455568999999995 99


Q ss_pred             HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          167 NRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       167 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++....  ...+++..+..++.||+.||+|||+++
T Consensus        87 ~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~  121 (314)
T cd08216          87 EDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSKG  121 (314)
T ss_pred             HHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99988643  346899999999999999999999988

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.89  E-value=1.5e-22  Score=176.31  Aligned_cols=117  Identities=29%  Similarity=0.491  Sum_probs=101.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+|.+.+.||+|+||.||+|.++.+++.+|||.+...       ...+.+|+.+++.++||||+++++++     ....+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF-----IEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhhee-----EeCCe
Confidence            3589999999999999999999999999999987531       23566899999999999999999999     44456


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++|||+.| +|.+++.........+++..++.++.||+.||.|||+++
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~  126 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR  126 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999996 999998865444567899999999999999999999988

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.89  E-value=1.9e-24  Score=197.19  Aligned_cols=196  Identities=21%  Similarity=0.327  Sum_probs=148.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...++|.++..+|.|+||.||+++++.+++..|+|+|+..    ..-+++|+-+++..+|||||.|++.|...     ..
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~-----dk   86 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR-----DK   86 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhh-----cC
Confidence            4456799999999999999999999999999999999743    35577999999999999999999999543     33


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      +||.||||+| +|+++..-    .+.++|.++.+.+++.+.||+|||+++                              
T Consensus        87 lwicMEycgggslQdiy~~----TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqi  162 (829)
T KOG0576|consen   87 LWICMEYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQI  162 (829)
T ss_pred             cEEEEEecCCCcccceeee----cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhh
Confidence            9999999996 99888765    678999999999999999999999998                              


Q ss_pred             cChHHhHhhhcCCCCHHHhhhh----CCCCCC------CCCCCC-----CC-----Ccc--------------ccccccC
Q 019844          204 VDQLVEIIKVLGTPTREEIKCM----NPNYTE------FKFPQI-----KP-----HPW--------------HKVFQKR  249 (335)
Q Consensus       204 ~~~~~~~~~~~g~~~~~~~~~~----~~~~~~------~~~~~~-----~~-----~~~--------------~~~~~~~  249 (335)
                      ...+.+-.++.|||.+..+...    .-.|..      .....+     ..     .+.              ...-+..
T Consensus       163 tati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~k  242 (829)
T KOG0576|consen  163 TATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTK  242 (829)
T ss_pred             hhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCcc
Confidence            1112233456788874433211    111211      000000     00     000              0011235


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      .++.+.+|++.+|..||++||+++.+|.|||..+
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence            7889999999999999999999999999999865

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.89  E-value=1.3e-22  Score=178.93  Aligned_cols=116  Identities=17%  Similarity=0.268  Sum_probs=94.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +|...+.||+|+||.||++.+..+++.||+|.+...     ...+.+|+.++.++. ||||+++++++.     .....+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~~   79 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDCW   79 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcEE
Confidence            477788999999999999999999999999998642     234678999999995 999999999984     344578


Q ss_pred             EEeecchhhHHHHHHHHh-hhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          157 LVLEYVPETVNRIARNYS-RIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      ++|||+.+++.++..... .....+++..+..++.|++.||+|||+. +
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~  128 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK  128 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence            999999876665544321 1246799999999999999999999975 5

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.89  E-value=4.1e-22  Score=175.87  Aligned_cols=112  Identities=24%  Similarity=0.425  Sum_probs=97.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc--------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD--------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      +|++.+.||.|+||.||+|.+.   .+|+.||+|++...        .+.+.+|+.+++.+ +|+||+++++++     .
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence            3889999999999999999985   47899999998642        24467899999999 699999999998     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+|+||||++| +|.+++..    ...+++..+..++.||+.||.|||+.+
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~  125 (290)
T cd05613          76 TDTKLHLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKLG  125 (290)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            56678999999996 99988876    567899999999999999999999988

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.89  E-value=8.9e-23  Score=197.35  Aligned_cols=67  Identities=25%  Similarity=0.428  Sum_probs=59.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFF  145 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~  145 (335)
                      +...+|+.+..||+||||.||+|+.+-+|+.||||+|+-.     ...+.+|+.+|++|+|||||+||..|.
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWV  547 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWV  547 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhh
Confidence            4566799999999999999999999999999999999643     245779999999999999999999884

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=7.9e-22  Score=171.69  Aligned_cols=114  Identities=26%  Similarity=0.450  Sum_probs=98.5

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +|.+.+.||+|+||.||+|.+..+++.||+|.+...         ...+.+|+.+++.++||||+++++++..   ....
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---~~~~   79 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD---PEEK   79 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc---CCCC
Confidence            599999999999999999999999999999987421         1346789999999999999999998843   2234


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++++|||++| +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        80 ~~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~  126 (264)
T cd06653          80 KLSIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSNM  126 (264)
T ss_pred             EEEEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            57899999986 99888875    456899999999999999999999988

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=7.6e-24  Score=185.35  Aligned_cols=120  Identities=28%  Similarity=0.360  Sum_probs=103.3

Q ss_pred             CCccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEec--cc---------chhHHHHHHHHHhCCCCceeeeceee
Q 019844           76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL--QD---------KRYKNRELQIMQMLDHPNIVALKHCF  144 (335)
Q Consensus        76 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~--~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~  144 (335)
                      +.....++|.++.+||+|+|+.||+|.+....++||||+-.  ++         .+...||..|.+.|+||-||++|++|
T Consensus       457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf  536 (775)
T KOG1151|consen  457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF  536 (775)
T ss_pred             cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence            34456678999999999999999999999999999999753  21         13456999999999999999999999


Q ss_pred             eeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          145 FSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       145 ~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....    ..+|-|+|||+| ||.-+|+.    ++.++|.+++.|+-||+.||.||....
T Consensus       537 slDt----dsFCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEik  588 (775)
T KOG1151|consen  537 SLDT----DSFCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEIK  588 (775)
T ss_pred             eecc----ccceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhccC
Confidence            6433    348899999998 99888887    778999999999999999999999776

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.89  E-value=2.7e-22  Score=174.56  Aligned_cols=115  Identities=21%  Similarity=0.346  Sum_probs=100.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .+|.+.+.||+|+||.||+|.++.+++.||+|.+..+.   ..+.+|+.+++.++||||+++++++     .....++++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEE-----cCCCCcEEE
Confidence            35999999999999999999999999999999987543   3467899999999999999999998     445568899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+++ +|.+++....  ...+++..++.++.|++.||.|||+++
T Consensus        81 ~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~  124 (263)
T cd05052          81 TEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN  124 (263)
T ss_pred             EEeCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999985 9999887532  346899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.89  E-value=1.8e-22  Score=180.52  Aligned_cols=113  Identities=27%  Similarity=0.415  Sum_probs=97.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .|...+.||+|+||.||++++..++..+|+|++....       ..+.+|+.+++.++||||+++++++     ......
T Consensus        26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~  100 (317)
T cd06635          26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCY-----LREHTA  100 (317)
T ss_pred             hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----eeCCeE
Confidence            4888999999999999999999999999999986321       3466899999999999999999999     444558


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.|+|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus       101 ~lv~e~~~g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~  145 (317)
T cd06635         101 WLVMEYCLGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHN  145 (317)
T ss_pred             EEEEeCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            899999999887777542   456899999999999999999999988

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.88  E-value=2.4e-22  Score=178.66  Aligned_cols=118  Identities=20%  Similarity=0.283  Sum_probs=95.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC----------------CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceee
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE----------------TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVA  139 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~  139 (335)
                      ..+|++.++||+|+||.||+|.+..                ++..||+|.+....     ..+.+|+.+++.++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            3469999999999999999998632                34479999986432     35778999999999999999


Q ss_pred             eceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhh---------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          140 LKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSR---------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       140 ~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~---------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++++     .....+|+||||+.+ +|.+++.....               ....+++..++.++.||+.||.|||+++
T Consensus        84 ~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          84 LLGVC-----VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             EEEEE-----ecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999     444458999999985 99998865221               0124677889999999999999999998

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.88  E-value=6.1e-22  Score=173.83  Aligned_cols=188  Identities=24%  Similarity=0.319  Sum_probs=128.5

Q ss_pred             eeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHH---HHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNREL---QIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei---~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .||+|+||.||+|.+..+++.||+|.+.+..       .....|.   .+++..+||||+.+++++     ....++|+|
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v   75 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI   75 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence            4899999999999999999999999986421       1122333   344556899999999999     555669999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh-----------
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV-----------  213 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~-----------  213 (335)
                      |||+.| +|..++..    .+.+++..++.|+.|++.||.|||+.++            + .....+..           
T Consensus        76 ~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~  151 (278)
T cd05606          76 LDLMNGGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK  151 (278)
T ss_pred             EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC
Confidence            999996 99888765    5679999999999999999999999880            0 00000011           


Q ss_pred             ----cCCCC---HHHhhhhCCCCCC------------------CCCCCCCC----------CccccccccCCChHHHHHH
Q 019844          214 ----LGTPT---REEIKCMNPNYTE------------------FKFPQIKP----------HPWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       214 ----~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~----------~~~~~~~~~~~s~~~~~li  258 (335)
                          .|+..   ++.+... ..+..                  ..+.....          ......++..++.++.++|
T Consensus       152 ~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  230 (278)
T cd05606         152 PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL  230 (278)
T ss_pred             CcCcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHH
Confidence                12211   1111100 00000                  00000000          0001123345789999999


Q ss_pred             HHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .+||..||.+|+     ++.++++||||....+
T Consensus       231 ~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~  263 (278)
T cd05606         231 EGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDW  263 (278)
T ss_pred             HHHhhcCHHhccCCCCCCHHHHHhCccccCCCc
Confidence            999999999999     9999999999998765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.3e-22  Score=173.40  Aligned_cols=105  Identities=32%  Similarity=0.495  Sum_probs=93.5

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ||.|+||.||++.+..+++.||+|++.+..       ..+..|+.+++.++||||+++++.+     ....++|+||||+
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence            699999999999998899999999986432       3567899999999999999999998     6667799999999


Q ss_pred             h-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 P-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      + ++|.+++..    ...+++..++.++.||+.||.|||+.+
T Consensus        76 ~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~~  113 (250)
T cd05123          76 PGGELFSHLSK----EGRFSEERARFYAAEIVLALEYLHSLG  113 (250)
T ss_pred             CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6 499999876    456899999999999999999999988

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.88  E-value=2e-22  Score=184.12  Aligned_cols=118  Identities=20%  Similarity=0.230  Sum_probs=97.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC-----cEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|++.+.||+|+||.||+|++..++     ..||+|.+....     ..+.+|+.+++.+ +|+|||++++++     
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~-----  111 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC-----  111 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe-----
Confidence            457999999999999999999865443     579999996432     3467899999999 899999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh-----------------------------------------------------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR-----------------------------------------------------  175 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~-----------------------------------------------------  175 (335)
                      .....+|+|||||.+ +|.+++.....                                                     
T Consensus       112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (374)
T cd05106         112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS  191 (374)
T ss_pred             cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence            555568999999995 99999865321                                                     


Q ss_pred             -------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          176 -------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       176 -------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                                   ...++++..++.|+.||+.||.|||+++
T Consensus       192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g  232 (374)
T cd05106         192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN  232 (374)
T ss_pred             cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence                         0134788999999999999999999998

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.88  E-value=4.1e-22  Score=170.79  Aligned_cols=101  Identities=20%  Similarity=0.151  Sum_probs=87.2

Q ss_pred             cCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHH
Q 019844           93 GSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIAR  171 (335)
Q Consensus        93 G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~  171 (335)
                      |.||.||+|+++.+++.||+|.+.+.. ...+|...+....||||+++++++     ....++|+||||++| +|.+++.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~   77 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLWSHIS   77 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHHHHHH
Confidence            899999999999999999999997643 344566666667899999999998     555668999999996 9999887


Q ss_pred             HHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          172 NYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       172 ~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .    ...+++..+..++.|++.||+|||+++
T Consensus        78 ~----~~~l~~~~~~~~~~ql~~~l~~lH~~~  105 (237)
T cd05576          78 K----FLNIPEECVKRWAAEMVVALDALHREG  105 (237)
T ss_pred             H----hcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6    456999999999999999999999988

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=4.6e-22  Score=175.38  Aligned_cols=112  Identities=24%  Similarity=0.398  Sum_probs=95.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc--------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD--------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      +|.+.+.||+|+||.||+|.+.   .+++.||||.+++.        ...+.+|+.++..+ +||||+++++++     .
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~   75 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q   75 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence            3889999999999999999864   46788999998642        13456899999999 699999999998     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+|+||||++| +|.+++..    ...+++..++.++.|++.||.|||+.+
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~  125 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQLG  125 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            55668999999996 99888875    466999999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.88  E-value=9e-23  Score=183.45  Aligned_cols=174  Identities=18%  Similarity=0.319  Sum_probs=133.2

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecch-hh
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ET  165 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~-g~  165 (335)
                      ++-||.|+-|.||+|+.+  ++.||||+++.   ....+|.-|++|+||||+.|.+++     ....++|||||||. |-
T Consensus       129 LeWlGSGaQGAVF~Grl~--netVAVKKV~e---lkETdIKHLRkLkH~NII~FkGVC-----tqsPcyCIiMEfCa~Gq  198 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRE---LKETDIKHLRKLKHPNIITFKGVC-----TQSPCYCIIMEFCAQGQ  198 (904)
T ss_pred             hhhhccCcccceeeeecc--CceehhHHHhh---hhhhhHHHHHhccCcceeeEeeee-----cCCceeEEeeecccccc
Confidence            678999999999999985  88999998743   234688999999999999999999     77778999999999 79


Q ss_pred             HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------cChHHhHhhhcCC
Q 019844          166 VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------VDQLVEIIKVLGT  216 (335)
Q Consensus       166 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------~~~~~~~~~~~g~  216 (335)
                      |+.+|+.    +..++......|..+|+.||.|||.+.                             .......+.++||
T Consensus       199 L~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGT  274 (904)
T KOG4721|consen  199 LYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGT  274 (904)
T ss_pred             HHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhh
Confidence            9999997    778999999999999999999999887                             0111112233444


Q ss_pred             CCHHHhhhhCCCCCC------------------------CCCCCC---------CCCccccccccCCChHHHHHHHHhcc
Q 019844          217 PTREEIKCMNPNYTE------------------------FKFPQI---------KPHPWHKVFQKRLPPEAVDLVCRFFQ  263 (335)
Q Consensus       217 ~~~~~~~~~~~~~~~------------------------~~~~~~---------~~~~~~~~~~~~~s~~~~~li~~~L~  263 (335)
                      -.     +|.|+...                        ..+..+         ....+....|..+++-++-||+.||+
T Consensus       275 Va-----WMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~  349 (904)
T KOG4721|consen  275 VA-----WMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWN  349 (904)
T ss_pred             Hh-----hhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHh
Confidence            33     22221110                        011111         11223345667899999999999999


Q ss_pred             CCCCCCCCHHHHhcCc
Q 019844          264 YSPNLRCTALEACVHP  279 (335)
Q Consensus       264 ~dP~~R~t~~~~L~hp  279 (335)
                      ..|..||++.++|.|-
T Consensus       350 sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  350 SKPRNRPSFRQILLHL  365 (904)
T ss_pred             cCCCCCccHHHHHHHH
Confidence            9999999999999985

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.88  E-value=3.5e-22  Score=172.62  Aligned_cols=108  Identities=23%  Similarity=0.329  Sum_probs=93.8

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      +.||+|+||.||+|.++.+++.||+|.+...     ...+.+|+.+++.++||||+++++++     .....+|+||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCCCCeEEEEeec
Confidence            4699999999999999999999999987542     24577899999999999999999998     4455689999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .| +|.+++...   ...+++..++.++.|++.||.|||+++
T Consensus        76 ~~~~L~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~  114 (252)
T cd05084          76 QGGDFLTFLRTE---GPRLKVKELIQMVENAAAGMEYLESKH  114 (252)
T ss_pred             cCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            86 999888642   346899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.88  E-value=3.2e-22  Score=183.88  Aligned_cols=89  Identities=24%  Similarity=0.284  Sum_probs=73.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCC-----CcEEEEEEeccc-----chhHHHHHHHHHhCC-CCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRET-----GEIVAIKKVLQD-----KRYKNRELQIMQMLD-HPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~  148 (335)
                      ..++|+++++||+|+||.||+|.+...     +..||||++...     ...+.+|+.+|+.++ |||||++++++    
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~----  110 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC----  110 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE----
Confidence            345799999999999999999987533     346999999643     235678999999996 99999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHH
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNY  173 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~  173 (335)
                       .....+|||||||+| +|.+++...
T Consensus       111 -~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         111 -TKSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             -ccCCceEEEEEecCCCcHHHHHHHh
Confidence             555669999999995 999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.88  E-value=7.1e-22  Score=171.16  Aligned_cols=113  Identities=22%  Similarity=0.328  Sum_probs=96.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ++|++.+.||+|+||.||++..+ .+..+|+|.+...   ...+.+|+.+++.++||||+++++++     .....+|+|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVC-----TQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEE-----ccCCCEEEE
Confidence            35899999999999999999885 4567999988643   24577899999999999999999998     445568999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        78 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05114          78 TEFMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERNS  120 (256)
T ss_pred             EEcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999985 999888752   245899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.88  E-value=2.3e-22  Score=174.65  Aligned_cols=112  Identities=29%  Similarity=0.410  Sum_probs=92.6

Q ss_pred             EEeeeeeccCceEEEEEEEc----CCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           85 IAEHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~----~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .+.+.||.|+||.||+|...    ..+..|+||.++..     ...+.+|+++++.++||||+++++++..     ...+
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-----~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-----NEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-----SSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-----cccc
Confidence            46789999999999999997    45678999999532     3567899999999999999999999962     2228


Q ss_pred             EEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||||+ |+|.+++....  ...+++..+..|+.||+.||.|||+++
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            89999999 59999999731  357999999999999999999999988

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.88  E-value=3.7e-22  Score=177.83  Aligned_cols=198  Identities=23%  Similarity=0.303  Sum_probs=137.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..|...+.||+|+||.||+|+++.++..+|+|.+...       ...+.+|+.+++.++|+||+++++++.     ....
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   89 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL-----REHT   89 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCe
Confidence            3488899999999999999999999999999998532       134568999999999999999999984     4455


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC------------h-HHhHhhh--------
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD------------Q-LVEIIKV--------  213 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~------------~-~~~~~~~--------  213 (335)
                      .++||||+.|+|.+++...   ...+++..+..++.|++.||.|||+.++-            . ....+..        
T Consensus        90 ~~lv~e~~~~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634          90 AWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             eEEEEEccCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            8899999999887776542   35689999999999999999999998800            0 0000001        


Q ss_pred             -----cCCC---CHHHhhhhCC-CC----CCC--------------CCCCCCC---------CccccccccCCChHHHHH
Q 019844          214 -----LGTP---TREEIKCMNP-NY----TEF--------------KFPQIKP---------HPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       214 -----~g~~---~~~~~~~~~~-~~----~~~--------------~~~~~~~---------~~~~~~~~~~~s~~~~~l  257 (335)
                           .|++   +++.+..... .+    .-|              .+.....         ..........++..+.+|
T Consensus       167 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  246 (308)
T cd06634         167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNF  246 (308)
T ss_pred             CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHH
Confidence                 1111   1221110000 00    000              0000000         000011123578889999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      |.+||+.+|.+||++.++++|||+.....+
T Consensus       247 i~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~  276 (308)
T cd06634         247 VDSCLQKIPQDRPTSEVLLKHRFVLRERPP  276 (308)
T ss_pred             HHHHhhCCcccCCCHHHHhhCccccccCCh
Confidence            999999999999999999999999875433

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.88  E-value=5.1e-23  Score=180.49  Aligned_cols=198  Identities=25%  Similarity=0.328  Sum_probs=146.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +.|..-++||+|+||.||-|+-+.||+.||+|.+.+.       ..-...|-.+|..++.+.||.+-.+|     +....
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf-----eTkd~  259 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF-----ETKDA  259 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee-----cCCCc
Confidence            4588899999999999999999999999999988532       13356899999999999999999999     66666


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------cChHH-----
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------VDQLV-----  208 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------~~~~~-----  208 (335)
                      +|+||..|.| ||.-.|.+..  ...|+|..+.+|+.+|+.||++||..+                    +..+.     
T Consensus       260 LClVLtlMNGGDLkfHiyn~g--~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei  337 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHG--NPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI  337 (591)
T ss_pred             eEEEEEeecCCceeEEeeccC--CCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec
Confidence            9999999996 9987777644  458999999999999999999999988                    11111     


Q ss_pred             ----hHhhhcCCCC---HHHhhhhCCCCCC---------C-------CCCCCCCC-cc----------ccccccCCChHH
Q 019844          209 ----EIIKVLGTPT---REEIKCMNPNYTE---------F-------KFPQIKPH-PW----------HKVFQKRLPPEA  254 (335)
Q Consensus       209 ----~~~~~~g~~~---~~~~~~~~~~~~~---------~-------~~~~~~~~-~~----------~~~~~~~~s~~~  254 (335)
                          .+...+||..   ++.+......|..         |       .|...+.. .+          ...++..+|+++
T Consensus       338 ~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~ea  417 (591)
T KOG0986|consen  338 PEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEA  417 (591)
T ss_pred             CCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHH
Confidence                1111234443   3333222111110         0       01111110 11          123567899999


Q ss_pred             HHHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          255 VDLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ++|++.+|+.||++|..     +.++.+||||+.+++
T Consensus       418 kslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw  454 (591)
T KOG0986|consen  418 KSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW  454 (591)
T ss_pred             HHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence            99999999999999995     679999999999877

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.88  E-value=8e-22  Score=172.60  Aligned_cols=117  Identities=23%  Similarity=0.290  Sum_probs=97.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .+|.+.+.||.|+||.||+|+.+.     +.+.+|+|.+....     ..+.+|+.+++.++|+||+++++++     ..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLC-----RE   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEE-----CC
Confidence            469999999999999999999754     34679999885432     3477899999999999999999998     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIH-----QRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+.|+||||+++ +|.+++.......     ..+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~  137 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR  137 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence            5668999999995 9999997632111     16899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.88  E-value=2.8e-21  Score=166.32  Aligned_cols=113  Identities=24%  Similarity=0.402  Sum_probs=99.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      +|.+.+.||+|++|.||++.+..+++.+++|++....    ..+.+|+.+++.++|+||+++++++     ......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY-----LKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeEEEE
Confidence            3889999999999999999999899999999986543    4677999999999999999999998     444558899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||++| +|.+++...   ...+++..+..++.|++.||.|||.++
T Consensus        76 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~  118 (253)
T cd05122          76 MEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSNG  118 (253)
T ss_pred             EecCCCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            999995 999988762   257999999999999999999999988

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.88  E-value=8.1e-22  Score=171.78  Aligned_cols=114  Identities=22%  Similarity=0.306  Sum_probs=97.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCC---CcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ++|++.+.||+|+||.||+|..+.+   ...||+|.+....     ..+.+|+.+++.++||||+++++++     ....
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecCC
Confidence            4599999999999999999998654   4579999886432     3466899999999999999999998     4455


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||+++ +|.+++...   .+.+++..+..++.|++.||.|||+++
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~  126 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEMN  126 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            58999999986 999998752   346899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.88  E-value=5.7e-22  Score=182.15  Aligned_cols=90  Identities=23%  Similarity=0.300  Sum_probs=74.2

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhCC-CCceeeeceeeeeC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLD-HPNIVALKHCFFST  147 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~  147 (335)
                      ...++|.+++.||+|+||.||+|+++     .+++.||+|++....     ..+.+|+.+|..+. |||||++++++   
T Consensus        34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~---  110 (401)
T cd05107          34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC---  110 (401)
T ss_pred             ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE---
Confidence            44457999999999999999999964     355789999996432     34678999999997 99999999999   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHH
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNY  173 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~  173 (335)
                        .....+++|||||.| +|.+++...
T Consensus       111 --~~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         111 --TKGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             --ccCCCcEEEEeccCCCcHHHHHHhc
Confidence              444558999999995 999999753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=1.5e-21  Score=169.12  Aligned_cols=113  Identities=24%  Similarity=0.365  Sum_probs=98.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .+|++.+.||.|+||.||+|...  |+.||+|.+....   +.+.+|+.+++.++|+||+++++++     ......|+|
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v   78 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVV-----LQGNPLYIV   78 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEE-----cCCCCeEEE
Confidence            45999999999999999999874  8899999997553   3677899999999999999999998     444558899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+++ +|.+++....  ...+++..++.++.|++.||.|||+++
T Consensus        79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~  122 (256)
T cd05039          79 TEYMAKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEKN  122 (256)
T ss_pred             EEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999995 9999987632  236899999999999999999999998

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=1.8e-22  Score=183.17  Aligned_cols=118  Identities=20%  Similarity=0.359  Sum_probs=102.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ....+.....+||-|.||.||.|.+++....||||.++.+.   ..+..|..+|+.++|||+|+++++|     ..+.-+
T Consensus       264 meRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC-----T~EpPF  338 (1157)
T KOG4278|consen  264 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----THEPPF  338 (1157)
T ss_pred             ccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh-----ccCCCe
Confidence            33445667899999999999999999999999999997653   6788999999999999999999999     444458


Q ss_pred             EEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+|||. |+|.++|++..  +..++.-...+++.||..||+||..++
T Consensus       339 YIiTEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkkn  385 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKKN  385 (1157)
T ss_pred             EEEEecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHhh
Confidence            99999998 79999999865  455777788899999999999999887

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.87  E-value=2.9e-21  Score=169.93  Aligned_cols=116  Identities=31%  Similarity=0.502  Sum_probs=97.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEE----cCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKC----RETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|++.+.||+|+||.||+|..    ..+++.||+|.+....    +.+.+|+.+++.++||||+++++++...   +..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~   80 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR   80 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence            3599999999999999999984    4578899999986432    3567899999999999999999987532   334


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~~  128 (284)
T cd05081          81 NLRLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSKR  128 (284)
T ss_pred             ceEEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            58899999985 999998752   345899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.87  E-value=1.4e-21  Score=169.74  Aligned_cols=115  Identities=21%  Similarity=0.286  Sum_probs=98.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++.++||+|+||.||+|.+. ++..||+|.+...   .+.+.+|+.+++.++|+||+++++++     ......++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   78 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIYI   78 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcEE
Confidence            456999999999999999999974 6678999988643   34677899999999999999999998     45556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||+.| +|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus        79 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~~~  123 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIERKN  123 (261)
T ss_pred             EEecCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999985 9999887532  456889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.87  E-value=5.3e-22  Score=180.20  Aligned_cols=185  Identities=26%  Similarity=0.435  Sum_probs=132.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCC--C--cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRET--G--EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~--~--~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ...+.+.||.|.||.||+|.+...  |  --||||..+.+     .+.+..|..+|+.++|||||+++|++..      .
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------~  463 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------Q  463 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------c
Confidence            445578999999999999997543  2  24899988753     3568899999999999999999999832      2


Q ss_pred             EEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-cChHHhH------------hhhcCCCC-
Q 019844          154 YLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-VDQLVEI------------IKVLGTPT-  218 (335)
Q Consensus       154 ~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-~~~~~~~------------~~~~g~~~-  218 (335)
                      -+|||||+++ |.|..++..+   ...++......|++||+.||.|||+.+ ++.....            ...+|... 
T Consensus       464 P~WivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~  540 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRY  540 (974)
T ss_pred             ceeEEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhh
Confidence            2889999999 8999999874   467999999999999999999999998 1111110            01112111 


Q ss_pred             ------------HHHhhhhCCCCCCCCCCCCCCCcc---------------------------------ccccccCCChH
Q 019844          219 ------------REEIKCMNPNYTEFKFPQIKPHPW---------------------------------HKVFQKRLPPE  253 (335)
Q Consensus       219 ------------~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~s~~  253 (335)
                                  ...+.++.|+-..|.......+.|                                 +.+.|+.|++.
T Consensus       541 ~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~  620 (974)
T KOG4257|consen  541 LEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPA  620 (974)
T ss_pred             ccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChH
Confidence                        122445555433322111111111                                 13467899999


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHh
Q 019844          254 AVDLVCRFFQYSPNLRCTALEAC  276 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L  276 (335)
                      ++.|+.+||.+||.+||++.++.
T Consensus       621 LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  621 LYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HHHHHHHHhccCcccCCcHHHHH
Confidence            99999999999999999976543

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.87  E-value=1.4e-21  Score=173.76  Aligned_cols=117  Identities=25%  Similarity=0.410  Sum_probs=97.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcE--EEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEI--VAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ++|.+.+.||+|+||.||+|.++.++..  +|+|.+...     ...+.+|+.++.++ +||||+++++++     ....
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CCCC
Confidence            4699999999999999999999877764  577776532     23567899999999 899999999998     5556


Q ss_pred             EEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|+||||+++ +|.+++.....            ....+++..++.++.||+.||+|||+++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  144 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  144 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68999999985 99999875321            1235899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.87  E-value=2e-21  Score=168.43  Aligned_cols=113  Identities=24%  Similarity=0.290  Sum_probs=96.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .+|++++.||+|+||.||++.+. .+..+|+|.+...   ...+.+|+.+++.++||||+++++++     .....+|+|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVC-----TKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEE-----ccCCCcEEE
Confidence            35999999999999999999875 3456999988643   24577899999999999999999998     444558899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+.+ +|.+++...   ...+++..++.++.||+.||.|||+.+
T Consensus        78 ~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  120 (256)
T cd05113          78 TEYMSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESKQ  120 (256)
T ss_pred             EEcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999985 999988753   236899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.87  E-value=1.5e-21  Score=171.19  Aligned_cols=118  Identities=20%  Similarity=0.238  Sum_probs=98.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.+....     ..+.+|+.+++.++|+||+++++++     .
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVS-----F   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----c
Confidence            3469999999999999999999987     77889999886332     3467899999999999999999988     3


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSR---IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....++||||+.| +|.+++.....   ....+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  136 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH  136 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            44457899999985 99999976421   1125899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.87  E-value=2.1e-21  Score=169.25  Aligned_cols=114  Identities=25%  Similarity=0.382  Sum_probs=97.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|++.+.||+|+||.||+|.++.++.   .+|+|.+...     ...+.+|+.+++.++||||+++++++     ....
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCC
Confidence            469999999999999999999865543   7999988642     24567899999999999999999998     4455


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|+||||++| +|.+++...   ...+++..+..++.|++.||.|||+++
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDMG  126 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            68999999986 999998752   346899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.87  E-value=2e-21  Score=172.67  Aligned_cols=117  Identities=22%  Similarity=0.285  Sum_probs=97.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEE-----cCCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKC-----RETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      ..++|.+.+.||+|+||.||+|.+     ..++..+|+|.++...     ..+.+|+.+++++ +||||+++++++    
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~----  108 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC----  108 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE----
Confidence            345799999999999999999986     3355689999886432     3467899999999 799999999998    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||+.+ +|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus       109 -~~~~~~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~  161 (302)
T cd05055         109 -TIGGPILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASKN  161 (302)
T ss_pred             -ecCCceEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             444558999999995 9999887522  234899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.1e-21  Score=171.84  Aligned_cols=118  Identities=19%  Similarity=0.191  Sum_probs=97.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC-----cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|.+.+.||+|+||.||+|.++..+     ..||+|.+....     ..+.+|+.+++.++||||+++++++     .
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~   79 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S   79 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEE-----c
Confidence            457999999999999999999986443     789999986432     3467899999999999999999998     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhh------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRI------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+.|+||||+++ +|.+++......      ...+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  139 (277)
T cd05032          80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK  139 (277)
T ss_pred             CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45668999999984 999998753211      234788899999999999999999988

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.87  E-value=1.8e-21  Score=170.62  Aligned_cols=118  Identities=19%  Similarity=0.239  Sum_probs=96.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|++.+.||+|+||.||+|.++     .++..||+|.+....     ..+.+|+.+++.++||||+++++++     .
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~   79 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S   79 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----c
Confidence            456999999999999999999874     245679999885422     3466899999999999999999998     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhh------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRI------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....++||||+++ +|.+++......      ...++...+..++.|++.||.|||+.+
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  139 (277)
T cd05062          80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK  139 (277)
T ss_pred             CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            55568899999995 999998753211      123577889999999999999999988

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.87  E-value=2e-21  Score=171.69  Aligned_cols=118  Identities=22%  Similarity=0.352  Sum_probs=98.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC-----cEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      ..+|++.+.||+|+||.||++..+...     ..+|+|.+....     ..+.+|+.+++.+ +|+||+++++++     
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-----   85 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVC-----   85 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE-----
Confidence            346999999999999999999986443     789999886432     3467899999999 899999999998     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHh------------hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYS------------RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....++++|||+.+ +|..++....            .....+++..+..++.||+.||.|||+++
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  152 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK  152 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            445558999999985 9999987531            12456899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA02988 hypothetical protein; Provisional

Probab=99.87  E-value=3.2e-21  Score=169.72  Aligned_cols=108  Identities=12%  Similarity=0.226  Sum_probs=91.6

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      ..||+|++|.||+|.+  +|+.||||.+....       +.+.+|+.+|++++|||||++++++.... ....++++|||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence            6799999999999998  68999999986431       34569999999999999999999985421 22346889999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      ||+| +|.+++..    .+.+++.....++.|++.||.|||+.
T Consensus       103 y~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~  141 (283)
T PHA02988        103 YCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKY  141 (283)
T ss_pred             eCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            9996 99999976    56789999999999999999999974

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.87  E-value=4.3e-22  Score=172.93  Aligned_cols=115  Identities=20%  Similarity=0.311  Sum_probs=100.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..+|+++++||.|+||.||+|.++. ++.+|+|.+....    ..+.+|+.+++.++||||+++++++     .....++
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC-----SVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE-----ecCCCeE
Confidence            3459999999999999999999976 8999999986433    4567899999999999999999998     4555689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++ +|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus        79 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~  124 (261)
T cd05148          79 IITELMEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQN  124 (261)
T ss_pred             EEEeecccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999996 9999997532  456899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.4e-22  Score=175.99  Aligned_cols=198  Identities=23%  Similarity=0.324  Sum_probs=148.4

Q ss_pred             ccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           78 SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        78 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .....+|..+.+||+|+||+|.+|..+.+.+.||||+++++.       +....|-++|... +-|.+++++.+|     
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF-----  419 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF-----  419 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence            455567999999999999999999999999999999997653       3345788888777 578999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------------------  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------------------  203 (335)
                      +.-..+|+||||+.| ||.-.+.+    .+.+.|..+.+|+.+|+-||-|||++|                         
T Consensus       420 QTmDRLyFVMEyvnGGDLMyhiQQ----~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFG  495 (683)
T KOG0696|consen  420 QTMDRLYFVMEYVNGGDLMYHIQQ----VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFG  495 (683)
T ss_pred             hhhhheeeEEEEecCchhhhHHHH----hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecc
Confidence            555559999999996 99888887    677999999999999999999999999                         


Q ss_pred             -----cChHHhHhhhcCCCCHHHhhhhCCCCCCCC------------------CCCCCCCc----------cccccccCC
Q 019844          204 -----VDQLVEIIKVLGTPTREEIKCMNPNYTEFK------------------FPQIKPHP----------WHKVFQKRL  250 (335)
Q Consensus       204 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------------~~~~~~~~----------~~~~~~~~~  250 (335)
                           +.......++||||.|......  .|.+|.                  -+......          -...+|..+
T Consensus       496 mcKEni~~~~TTkTFCGTPdYiAPEIi--~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKsl  573 (683)
T KOG0696|consen  496 MCKENIFDGVTTKTFCGTPDYIAPEII--AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSL  573 (683)
T ss_pred             cccccccCCcceeeecCCCcccccceE--EecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccc
Confidence                 1111122245676663221111  011110                  00000000          012367889


Q ss_pred             ChHHHHHHHHhccCCCCCCCCH-----HHHhcCcccccCCC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTA-----LEACVHPFFDELRD  286 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~-----~~~L~hp~f~~~~~  286 (335)
                      |.++.+++..+|...|.+|..+     .++-.||||+.+.|
T Consensus       574 SkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  574 SKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             cHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence            9999999999999999999964     68999999999887

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.87  E-value=5.7e-22  Score=179.27  Aligned_cols=119  Identities=20%  Similarity=0.300  Sum_probs=96.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEE-----cCCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKC-----RETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||.++...     ..+.+|+.++..+ +||||+++++++..   
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~---   82 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---   82 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence            35799999999999999999985     3467899999996422     3467899999999 68999999998842   


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh-----------------------------------------------------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR-----------------------------------------------------  175 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~-----------------------------------------------------  175 (335)
                       ....+++|||||++ +|.+++.....                                                     
T Consensus        83 -~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          83 -PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             -CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence             23457899999995 99999865210                                                     


Q ss_pred             ----------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          176 ----------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       176 ----------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                                ....+++..+..++.||+.||.|||+++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  199 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK  199 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                      0124788888999999999999999988

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.9e-21  Score=168.48  Aligned_cols=112  Identities=24%  Similarity=0.331  Sum_probs=96.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +|++.+.||+|+||.||+|.++ ++..+|+|.+.+.   ...+.+|+.+++.++||||+++++++     ....+.|+||
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~   78 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVC-----TKQRPIFIVT   78 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEE-----cCCCceEEEE
Confidence            5899999999999999999985 5678999998643   23567899999999999999999998     5555689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        79 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  120 (256)
T cd05059          79 EYMANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESNG  120 (256)
T ss_pred             ecCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99986 999988752   246899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.87  E-value=1.5e-21  Score=176.89  Aligned_cols=111  Identities=16%  Similarity=0.254  Sum_probs=96.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .....++..||+|.||+||+|++.   -.||||++..+      .+.++.|+.++++-+|.||+-+.|++     .+..+
T Consensus       391 ~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~-----~~p~~  462 (678)
T KOG0193|consen  391 PEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC-----MNPPL  462 (678)
T ss_pred             HHHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh-----cCCce
Confidence            345778999999999999999984   45999999643      36688999999999999999999999     55554


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .||+.+|+| +|+.+++...   ..|.......|++||+.||.|||.++
T Consensus       463 -AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK~  508 (678)
T KOG0193|consen  463 -AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAKN  508 (678)
T ss_pred             -eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhhh
Confidence             799999999 9999998643   45899999999999999999999998

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.87  E-value=1.4e-21  Score=171.79  Aligned_cols=117  Identities=21%  Similarity=0.313  Sum_probs=97.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCC-----cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETG-----EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~-----~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .+|++.+.||+|+||.||+|.+...+     ..||+|.+....     ..+.+|+.+++.++||||+++++++     ..
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVC-----TK   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEE-----cC
Confidence            35999999999999999999986555     679999986432     3467899999999999999999998     44


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....|++|||+++ +|.+++.....            ....+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~  144 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH  144 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4558899999995 99999976321            0145889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.87  E-value=2e-21  Score=172.11  Aligned_cols=116  Identities=18%  Similarity=0.302  Sum_probs=96.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||||.+.+..     ..+.+|+.++..+ +||||+++++++     ....
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~   87 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF-----ITDS   87 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee-----ecCC
Confidence            3456999999999999999999999889999999986432     2345677767666 599999999999     5555


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      .+|++|||+.++|.+++...   ...+++..+..++.||+.||.|||+. +
T Consensus        88 ~~~~v~e~~~~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~  135 (296)
T cd06618          88 DVFICMELMSTCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHG  135 (296)
T ss_pred             eEEEEeeccCcCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence            69999999998887777653   34789999999999999999999974 5

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.87  E-value=4e-21  Score=169.12  Aligned_cols=114  Identities=25%  Similarity=0.388  Sum_probs=96.3

Q ss_pred             eEEeeeeeccCceEEEEEEE----cCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           84 YIAEHVVGTGSFGVVFQAKC----RETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      |++++.||+|+||.||+|.+    +.+++.||+|.+...     ...+.+|+.+++.++||||+++++++..   .+...
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~   82 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGGNG   82 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCCCc
Confidence            78999999999999999984    457889999998633     2457789999999999999999998843   22355


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++||||++| +|.+++...   ...+++..+..++.||+.||+|||+++
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~g  129 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSRQ  129 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999986 999988652   235899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.87  E-value=2.3e-21  Score=170.97  Aligned_cols=118  Identities=23%  Similarity=0.354  Sum_probs=98.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|.+.+.||+|+||+||++.+.     .++..+|+|.+....    ..+.+|+.+++.++||||+++++++     ..
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~   78 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----VE   78 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----ec
Confidence            456999999999999999999863     345679999986432    3577899999999999999999998     45


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhh---------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSR---------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~---------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++|+||||+++ +|.+++.....         ....+++..++.++.||+.||+|||+++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~  140 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH  140 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5568999999995 99999875321         1235899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.5e-21  Score=189.83  Aligned_cols=119  Identities=19%  Similarity=0.325  Sum_probs=99.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCc-----EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGE-----IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      .....++...||+|+||.||.|.......     .||+|.+++.     ...+.+|..+|+.++|||||+++|++++...
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            34568889999999999999999864333     3999998753     3557899999999999999999999975333


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRI---HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                           .+|++|||.| ||..+|++.+..   ...++..+...++.||+.|++||++++
T Consensus       770 -----~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~  822 (1025)
T KOG1095|consen  770 -----PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH  822 (1025)
T ss_pred             -----cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC
Confidence                 7799999995 999999974211   345899999999999999999999988

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.87  E-value=2.3e-21  Score=171.48  Aligned_cols=117  Identities=20%  Similarity=0.293  Sum_probs=97.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCC----------------cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeee
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETG----------------EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVAL  140 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~----------------~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~  140 (335)
                      .+|++.+.||+|+||.||+|.+..++                ..||+|.+...     ...+.+|+.+++.++||||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            46999999999999999999876544                46899998643     2456789999999999999999


Q ss_pred             ceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhh-------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 KHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSR-------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~-------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++     ....+++++|||+.+ +|.+++.....       ....+++..++.++.|++.||.|||+++
T Consensus        85 ~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~  150 (296)
T cd05051          85 LGVC-----TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN  150 (296)
T ss_pred             EEEE-----ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            9998     444568999999985 99999876321       1126899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.87  E-value=3e-21  Score=167.64  Aligned_cols=115  Identities=20%  Similarity=0.267  Sum_probs=97.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|+++++||+|+||.||+|..+ +++.||+|.+....   ..+.+|+.+++.++||||+++++++.     . ..+|
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~-~~~~   76 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVT-----Q-EPIY   76 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-----c-CCcE
Confidence            3456999999999999999999874 67889999986533   45778999999999999999999862     2 2378


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||+.+ +|.+++....  ...+++..+..++.|++.||+|||+.+
T Consensus        77 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~  122 (260)
T cd05067          77 IITEYMENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIERKN  122 (260)
T ss_pred             EEEEcCCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999985 9999886532  356899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=2.2e-22  Score=195.69  Aligned_cols=200  Identities=22%  Similarity=0.373  Sum_probs=147.7

Q ss_pred             CccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           77 NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        77 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ......+|..+..||.|.||.||-|.+..+|+..|+|.|.-      ..+.+.+|..++..|+|||+|++|++-...+  
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-- 1307 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-- 1307 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH--
Confidence            33566689999999999999999999999999999999852      2355679999999999999999999985433  


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-------------------------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-------------------------  204 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-------------------------  204 (335)
                         .++|.||||.| +|.+++..    .+-.+|...+.|..|++.|+.|||++|+                         
T Consensus      1308 ---kv~IFMEyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1308 ---KVYIFMEYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred             ---HHHHHHHHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccc
Confidence               38899999995 99999986    5567888889999999999999999990                         


Q ss_pred             ---------ChHHhHhhhcCCCCHHHhhhhCCCC--C---C---CCCC------CCCCCccc-----------------c
Q 019844          205 ---------DQLVEIIKVLGTPTREEIKCMNPNY--T---E---FKFP------QIKPHPWH-----------------K  244 (335)
Q Consensus       205 ---------~~~~~~~~~~g~~~~~~~~~~~~~~--~---~---~~~~------~~~~~~~~-----------------~  244 (335)
                               +--......+|||.|.......-.-  .   +   +.+.      .....||.                 +
T Consensus      1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~P 1460 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKP 1460 (1509)
T ss_pred             eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCC
Confidence                     0001122334554422211110000  0   0   0000      00122333                 3


Q ss_pred             ccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          245 VFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      .+|..+|.+.+|||.+||+.||++|.++.|+|.|.|-+...
T Consensus      1461 q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~ 1501 (1509)
T KOG4645|consen 1461 QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCT 1501 (1509)
T ss_pred             CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccccc
Confidence            46678999999999999999999999999999999977653

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.86  E-value=3.4e-21  Score=166.94  Aligned_cols=111  Identities=28%  Similarity=0.441  Sum_probs=95.2

Q ss_pred             eeeeccCceEEEEEEEcCC---CcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRET---GEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.+...   +..||+|.+...     ...+.+|+.+++.++|+||+++++++     .....+++||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVC-----TEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeee-----cCCCceEEEE
Confidence            4699999999999999866   889999999643     24577899999999999999999999     4456689999


Q ss_pred             ecchh-hHHHHHHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRI-----HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||++| +|.+++......     ...+++..++.++.||+.||+|||+++
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~  125 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK  125 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            99975 999998873211     267999999999999999999999988

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.86  E-value=1.6e-21  Score=172.56  Aligned_cols=117  Identities=21%  Similarity=0.288  Sum_probs=95.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCC--------------cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeece
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETG--------------EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKH  142 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~--------------~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~  142 (335)
                      .+|++.+.||+|+||.||+|.+..++              ..||+|.+....     ..+.+|+++++.++||||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            46999999999999999999875432              359999986432     34678999999999999999999


Q ss_pred             eeeeCCCCCccEEEEEeecchh-hHHHHHHHHhh--------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSR--------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       143 ~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~--------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++     .....+|+||||+++ +|.+++.....        ....+++..+..++.||+.||.|||+++
T Consensus        85 ~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  149 (295)
T cd05097          85 VC-----VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN  149 (295)
T ss_pred             EE-----cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC
Confidence            99     445568999999996 99998864210        0124688899999999999999999998

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.86  E-value=1.7e-21  Score=170.96  Aligned_cols=117  Identities=23%  Similarity=0.376  Sum_probs=98.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .+|.+.+.||+|+||.||+|.+..     +++.||+|.+...     ...+.+|+.+++.++||||+++++++     ..
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVC-----TE   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEE-----ec
Confidence            459999999999999999998753     4678999998643     24577899999999999999999999     44


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhh----------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSR----------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~----------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....|+||||++| +|.+++.....          ....+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  142 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH  142 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence            4568999999996 99999976321          1245889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.86  E-value=5.3e-21  Score=166.91  Aligned_cols=113  Identities=24%  Similarity=0.394  Sum_probs=97.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +|++.+.||+|+||.||+|.++.+++   .||||.+...     ...+..|+.+++.++||||+++++++     .....
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~   79 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSRP   79 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCCc
Confidence            48999999999999999999987665   5999998642     23577899999999999999999998     55556


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++||||+++ +|.+++...   .+.+++..++.++.|++.||.|||+++
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~g  126 (269)
T cd05065          80 VMIITEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEMN  126 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999996 999888752   356899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.86  E-value=2.6e-21  Score=170.18  Aligned_cols=117  Identities=20%  Similarity=0.289  Sum_probs=96.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ++|++.+.||+|+||.||+|...    .++..||+|.+....     ..+.+|+.+++.++||||+++++++     ...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVV-----TQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEE-----ecC
Confidence            45899999999999999999853    456789999986422     3567899999999999999999998     444


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhh-------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSR-------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~-------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...|+||||+++ +|.+++.....             ....+++..+..++.||+.||.|||+++
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  144 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF  144 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC
Confidence            558999999995 99998863210             1234788999999999999999999998

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=2.6e-21  Score=176.06  Aligned_cols=112  Identities=19%  Similarity=0.307  Sum_probs=102.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      -|..++.||-|+||+|.+++...|...||.|.+++..       ..++.|..||...+++.||+||..|     +++.++
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF-----QDkdnL  704 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL  704 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe-----ccCCce
Confidence            5889999999999999999999999999999986532       3456899999999999999999999     888889


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| |+..+|-.    .+-|.|..+++|+.+|.+|+++.|..|
T Consensus       705 YFVMdYIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkmG  749 (1034)
T KOG0608|consen  705 YFVMDYIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKMG  749 (1034)
T ss_pred             EEEEeccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999996 99999887    678999999999999999999999998

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.86  E-value=1.8e-21  Score=175.51  Aligned_cols=119  Identities=21%  Similarity=0.299  Sum_probs=96.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|++.+.||+|+||.||+|.+.     .+++.||+|++...     .+.+.+|+.++.++ +|+||+++++++..   
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~---   82 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK---   82 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec---
Confidence            457999999999999999999754     34578999998632     13466899999999 89999999998852   


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh-----------------------------------------------------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR-----------------------------------------------------  175 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~-----------------------------------------------------  175 (335)
                       ....++++|||++| +|.+++.....                                                     
T Consensus        83 -~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          83 -PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             -CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence             33458899999996 99998864221                                                     


Q ss_pred             ----hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          176 ----IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       176 ----~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                          ....+++..+..++.||+.||.|||+++
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~  193 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRK  193 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                0236899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.86  E-value=4.3e-21  Score=173.16  Aligned_cols=117  Identities=22%  Similarity=0.261  Sum_probs=96.2

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ....+..+.++||+|.||.|.+|.-. .+..||+|.++.+.     ..+.+||.+|.+|+|||||++++++..++.    
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP----  609 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP----  609 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc----
Confidence            34456889999999999999999973 46899999997532     568899999999999999999999954433    


Q ss_pred             EEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       +|+|||||+ |||.+++..+..  ..+.-.....|+.||+.||+||.+.+
T Consensus       610 -icmI~EYmEnGDLnqFl~ahea--pt~~t~~~vsi~tqiasgmaYLes~n  657 (807)
T KOG1094|consen  610 -LCMITEYMENGDLNQFLSAHEL--PTAETAPGVSICTQIASGMAYLESLN  657 (807)
T ss_pred             -hHHHHHHHhcCcHHHHHHhccC--cccccchhHHHHHHHHHHHHHHHhhc
Confidence             889999999 799999987421  22344455679999999999999887

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.86  E-value=4.5e-21  Score=167.50  Aligned_cols=120  Identities=19%  Similarity=0.307  Sum_probs=96.8

Q ss_pred             eEEeeeeeccCceEEEEEEEcCC---CcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCcc
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEEL  153 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~  153 (335)
                      |.+++.||+|+||.||+|....+   +..||+|.+....      ..+.+|+.+++.++||||+++++++..... ....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            56889999999999999997653   4789999986432      356789999999999999999998854332 2334


Q ss_pred             EEEEEeecchh-hHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSR--IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.+++|||+.+ +|..++.....  ....+++..+..++.|++.||.|||+++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~  133 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN  133 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            57899999995 99988865321  1246899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.86  E-value=7.9e-23  Score=168.84  Aligned_cols=199  Identities=26%  Similarity=0.420  Sum_probs=153.2

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .+--+.||-|+||+||.+.+.++|+.||+|++..      ..+++.+|+.+|.-++|.||...++............+|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            3345679999999999999999999999999863      3467789999999999999999998874433333334789


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------------  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------------  203 (335)
                      ++|+|..||..++-.    .+.++...++.+++||++||+|||+.+                                  
T Consensus       135 ~TELmQSDLHKIIVS----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  135 LTELMQSDLHKIIVS----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHhhhhheecc----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence            999999999999886    788999999999999999999999987                                  


Q ss_pred             -----------------------------------------------------cChHHhHhhhcCCCCHHHhhhhCCCCC
Q 019844          204 -----------------------------------------------------VDQLVEIIKVLGTPTREEIKCMNPNYT  230 (335)
Q Consensus       204 -----------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~  230 (335)
                                                                           +.++..+++++|||.-+.+.....+..
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk  290 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAK  290 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhH
Confidence                                                                 667888889999999887764322211


Q ss_pred             CCCCC-CCCCCcccccc----ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          231 EFKFP-QIKPHPWHKVF----QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       231 ~~~~~-~~~~~~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ..-+. ..+...+...+    +..-..+..+++.+||.+||++|++..+++.|++..+.+.
T Consensus       291 ~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  291 NHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEGRL  351 (449)
T ss_pred             HHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccccce
Confidence            11000 00111111111    1234567889999999999999999999999999877654

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.86  E-value=5.2e-21  Score=168.27  Aligned_cols=113  Identities=32%  Similarity=0.521  Sum_probs=95.0

Q ss_pred             ee-EEeeeeeccCceEEEEEEE----cCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           83 SY-IAEHVVGTGSFGVVFQAKC----RETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y-~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +| ++.+.||+|+||+||++..    ..++..||+|.+...     ...+.+|+.+++.++||||+++++++..   ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~   80 (283)
T cd05080           4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGG   80 (283)
T ss_pred             hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCC
Confidence            45 8999999999999988653    357889999998643     2346789999999999999999998743   234


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|+||||+.+ +|.+++..     ..+++.+++.++.|++.||.|||+++
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~~  127 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQH  127 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            468899999996 99988864     45999999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.86  E-value=5.8e-21  Score=170.01  Aligned_cols=119  Identities=21%  Similarity=0.339  Sum_probs=97.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcC-------CCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeee
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRE-------TGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFS  146 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~  146 (335)
                      ..++|.+++.||+|+||.||+|.+..       +...+|+|.+..+.     ..+.+|+.+++.+ +||||+++++++  
T Consensus        16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~--   93 (307)
T cd05098          16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC--   93 (307)
T ss_pred             ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEE--
Confidence            34579999999999999999998743       23569999987432     3466899999999 799999999999  


Q ss_pred             CCCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          147 TTDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                         .....+|+||||+++ +|.+++.....            ....+++..+..++.||+.||+|||+++
T Consensus        94 ---~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  160 (307)
T cd05098          94 ---TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK  160 (307)
T ss_pred             ---ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               445568999999995 99999976321            1135888999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.86  E-value=7.8e-21  Score=164.62  Aligned_cols=114  Identities=24%  Similarity=0.348  Sum_probs=96.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc--hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      .+|++.+.||+|+||.||++...  +..+|+|.+....  +.+.+|+.+++.++|+||++++++++    .....+|+||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~lv~   79 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYIVT   79 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEEEE
Confidence            46999999999999999999874  7889999986543  45779999999999999999999764    2334588999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+++ +|.+++....  ...+++..+..++.||+.||+|||+++
T Consensus        80 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~  122 (256)
T cd05082          80 EYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEANN  122 (256)
T ss_pred             ECCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99995 9999987532  335889999999999999999999998

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=9.3e-21  Score=164.53  Aligned_cols=116  Identities=24%  Similarity=0.306  Sum_probs=99.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|.+.+.||.|+||.||+|.+. .++.+|||.+...   ...+.+|+.+++.++|+||+++++++     .....++
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   77 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPIY   77 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCceE
Confidence            3457999999999999999999985 5578999998643   34678999999999999999999998     4445589


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++ +|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus        78 ~v~e~~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~~  123 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESRN  123 (261)
T ss_pred             EEEeccCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999986 9999987532  346899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.86  E-value=5.3e-22  Score=181.28  Aligned_cols=192  Identities=25%  Similarity=0.362  Sum_probs=136.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ..+.|.+...+|.|+|+.|..|.+..+++.+|+|+|.+......+|+.++... +||||+++++++     .+..++|+|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~~~~v  394 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKEIYLV  394 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeeccee-----cCCceeeee
Confidence            46679999999999999999999999999999999988777788899777666 799999999999     777889999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-Ch-------HH------hHhhhcCCCCHHHhh
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-DQ-------LV------EIIKVLGTPTREEIK  223 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-~~-------~~------~~~~~~g~~~~~~~~  223 (335)
                      ||++.| -|.+-+..    ...+. .++..|++||+.|+.|||++|+ ..       +.      ..+..+|......-.
T Consensus       395 ~e~l~g~ell~ri~~----~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  395 MELLDGGELLRRIRS----KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             ehhccccHHHHHHHh----cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            999996 44333332    22233 7888999999999999999991 00       00      011112221111111


Q ss_pred             hhC----CCCCCCCCCCC----CCCccc-------------------------------cccccCCChHHHHHHHHhccC
Q 019844          224 CMN----PNYTEFKFPQI----KPHPWH-------------------------------KVFQKRLPPEAVDLVCRFFQY  264 (335)
Q Consensus       224 ~~~----~~~~~~~~~~~----~~~~~~-------------------------------~~~~~~~s~~~~~li~~~L~~  264 (335)
                      +..    -.|.+......    ...+|.                               ..+...+|++++|||++||+.
T Consensus       470 ~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~  549 (612)
T KOG0603|consen  470 CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQV  549 (612)
T ss_pred             hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccC
Confidence            111    12221111100    011111                               112357899999999999999


Q ss_pred             CCCCCCCHHHHhcCccc
Q 019844          265 SPNLRCTALEACVHPFF  281 (335)
Q Consensus       265 dP~~R~t~~~~L~hp~f  281 (335)
                      ||.+|+++.+++.||||
T Consensus       550 dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  550 DPALRLGADEIGAHPWF  566 (612)
T ss_pred             ChhhCcChhhhccCcch
Confidence            99999999999999999

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.86  E-value=2.7e-21  Score=169.31  Aligned_cols=107  Identities=16%  Similarity=0.201  Sum_probs=87.5

Q ss_pred             eeeccCceEEEEEEEcCC------------------------CcEEEEEEecccc----hhHHHHHHHHHhCCCCceeee
Q 019844           89 VVGTGSFGVVFQAKCRET------------------------GEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVAL  140 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~~~~------------------------~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~  140 (335)
                      .||+|+||.||+|....+                        ...||+|.+....    ..+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            699999999999975322                        2358899886432    346688999999999999999


Q ss_pred             ceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 KHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++.     ...+.++||||+++ +|..++...   .+.+++..+..++.||+.||+|||+++
T Consensus        82 ~~~~~-----~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  137 (274)
T cd05076          82 HGVCV-----RGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDKN  137 (274)
T ss_pred             EEEEE-----eCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            99984     44458899999996 888887642   456899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=6.6e-21  Score=165.54  Aligned_cols=115  Identities=21%  Similarity=0.243  Sum_probs=98.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..+|++.+.||+|+||.||+|.+. +++.||+|.+...   .+.+.+|+.++++++||||+++++++     .....+|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVC-----TLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEE-----ecCCCeee
Confidence            346999999999999999999974 5578999998653   24577899999999999999999998     44555899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++| +|.+++....  ...+++..+..++.|++.||.|||+++
T Consensus        79 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (261)
T cd05068          79 VTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQN  123 (261)
T ss_pred             eeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999974 9999987532  346899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.86  E-value=3.5e-21  Score=169.80  Aligned_cols=118  Identities=25%  Similarity=0.321  Sum_probs=97.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|.+...     ...+.+|+.+++.++||||+++++++     .
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~-----~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVC-----A   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEE-----c
Confidence            3469999999999999999999753     6788999998643     24577899999999999999999998     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhh------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSR------------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+|+||||+++ +|.+++.....                  ....+++..++.++.||+.||.|||.++
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~  150 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK  150 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            44558899999995 99999875211                  1124788899999999999999999988

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.86  E-value=4.7e-21  Score=171.34  Aligned_cols=113  Identities=21%  Similarity=0.383  Sum_probs=94.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcE----EEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEI----VAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+|++.+.||+|+||.||+|++..++..    ||+|.+...     ...+.+|+.+++.++||||+++++++..     .
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~-----~   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-----S   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-----C
Confidence            4699999999999999999998766654    899998632     2456789999999999999999999842     2


Q ss_pred             cEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ..++|+||+. |+|.+++...   ...+++..+..++.||+.||+|||+++
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEERR  129 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhcC
Confidence             2568999998 5999988752   345889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.86  E-value=7.4e-21  Score=165.16  Aligned_cols=114  Identities=23%  Similarity=0.284  Sum_probs=96.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++.+.||+|+||.||+|.+. .+..+|+|.+...   ...+.+|+.+++.++|+||+++++++     .. ...|+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-----~~-~~~~l   77 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVV-----SE-EPIYI   77 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEE-----CC-CCcEE
Confidence            356999999999999999999875 6677999998642   24577999999999999999999987     22 23679


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||+++ +|.+++....  ...+++..++.++.|++.||.|||+++
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05070          78 VTEYMSKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERMN  122 (260)
T ss_pred             EEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999986 9999887532  345899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.86  E-value=7.1e-21  Score=168.66  Aligned_cols=117  Identities=24%  Similarity=0.362  Sum_probs=96.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc--EEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE--IVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~--~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ++|++.+.||+|+||.||+|.++.++.  .+|+|.++..     .+.+.+|+.+++++ +||||+++++++     ....
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC-----ENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE-----ccCC
Confidence            469999999999999999999877765  4688887631     23567899999999 799999999998     5555


Q ss_pred             EEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||+++ +|.+++.....            ....+++..++.++.||+.||+|||+++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~  139 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ  139 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            68999999985 99999875321            1135889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.86  E-value=1.6e-20  Score=162.63  Aligned_cols=112  Identities=22%  Similarity=0.347  Sum_probs=96.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +|++.+.||.|+||.||++.+. .+..+|+|.+...   ...+.+|+.+++.++||||+++++++     .....+|+||
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~   78 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPICLVF   78 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceEEEE
Confidence            5999999999999999999885 4778999988643   24577899999999999999999998     4555689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+.| +|.+++...   ...+++..++.++.|++.||+|||+.+
T Consensus        79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~  120 (256)
T cd05112          79 EFMEHGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSN  120 (256)
T ss_pred             EcCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99996 998888652   345899999999999999999999888

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.85  E-value=9.2e-21  Score=166.38  Aligned_cols=119  Identities=17%  Similarity=0.197  Sum_probs=98.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC----CCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE----TGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~----~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .++|++.+.||+|+||.||+|.+..    ++..||+|.+...     ...+.+|+.+++.++||||+++++++...    
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~----   80 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED----   80 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence            4579999999999999999999875    3578999988643     23467899999999999999999987532    


Q ss_pred             ccEEEEEeecch-hhHHHHHHHHhhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVP-ETVNRIARNYSRIH----QRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~-g~L~~~l~~~~~~~----~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....++++||++ |+|.+++.......    ..+++..++.++.||+.||.|||+++
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  137 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG  137 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            334779999998 49999987643211    46899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=5.2e-21  Score=162.34  Aligned_cols=200  Identities=21%  Similarity=0.353  Sum_probs=148.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      ....+|.++.+||+|+|++|.+++++.|.+.||+|+++++.       ..++.|-.+..+. +||.+|.++.+|     +
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf-----q  321 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF-----Q  321 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh-----c
Confidence            34457999999999999999999999999999999997532       4467788888777 799999999999     6


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------------  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------------  203 (335)
                      .+..+++|.||++| +|.-.+..    ...++|+.+++|..+|+.||.|||+.|                          
T Consensus       322 tesrlffvieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygm  397 (593)
T KOG0695|consen  322 TESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGM  397 (593)
T ss_pred             ccceEEEEEEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccch
Confidence            77779999999996 98777776    567999999999999999999999999                          


Q ss_pred             ----cChHHhHhhhcCCCCHHHhhhh-CCCCC--------------------CCC---CCCCC--CCc--c------ccc
Q 019844          204 ----VDQLVEIIKVLGTPTREEIKCM-NPNYT--------------------EFK---FPQIK--PHP--W------HKV  245 (335)
Q Consensus       204 ----~~~~~~~~~~~g~~~~~~~~~~-~~~~~--------------------~~~---~~~~~--~~~--~------~~~  245 (335)
                          +.......++||||.+...... ...|.                    +|.   ..+..  ...  +      ...
T Consensus       398 cke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir  477 (593)
T KOG0695|consen  398 CKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR  477 (593)
T ss_pred             hhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence                1111122345677663221111 00010                    110   00000  000  0      112


Q ss_pred             cccCCChHHHHHHHHhccCCCCCCCC------HHHHhcCcccccCCCC
Q 019844          246 FQKRLPPEAVDLVCRFFQYSPNLRCT------ALEACVHPFFDELRDP  287 (335)
Q Consensus       246 ~~~~~s~~~~~li~~~L~~dP~~R~t------~~~~L~hp~f~~~~~~  287 (335)
                      +|..+|-.+..+++..|.+||.+|..      +.++..|+||+.+.|.
T Consensus       478 iprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  478 IPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             ccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence            46778889999999999999999985      6899999999988763

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=7.6e-21  Score=164.77  Aligned_cols=106  Identities=28%  Similarity=0.384  Sum_probs=90.5

Q ss_pred             eeeeccCceEEEEEEEcCCC---cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETG---EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ++||+|+||.||+|.+..++   ..+|+|.+....     +.+.+|+.+++.++||||+++++++     .. ..+++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~-~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVC-----KG-EPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----cC-CceEEEE
Confidence            47999999999999876655   789999986433     3567899999999999999999987     22 2368999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+.+ +|.+++..    ...+++..+..++.|++.||.|||..+
T Consensus        75 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~~  115 (257)
T cd05060          75 ELAPLGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESKH  115 (257)
T ss_pred             EeCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            99985 99999876    457999999999999999999999988

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.85  E-value=1.1e-20  Score=164.71  Aligned_cols=114  Identities=21%  Similarity=0.314  Sum_probs=97.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|+..+.||+|+||.||+|.++.++.   .+|+|.+...     ...+..|+.+++.++||||+++++++     ....
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   79 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVV-----TKFK   79 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----ccCC
Confidence            368999999999999999999876665   7999998643     23467899999999999999999999     4455


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.|+||||+++ +|.+++...   .+.+++..+..++.|++.||+|||+.+
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~  127 (268)
T cd05063          80 PAMIITEYMENGALDKYLRDH---DGEFSSYQLVGMLRGIAAGMKYLSDMN  127 (268)
T ss_pred             CcEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            68899999996 998888652   356899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.85  E-value=9.1e-21  Score=164.88  Aligned_cols=114  Identities=25%  Similarity=0.290  Sum_probs=95.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..+|++.++||+|+||.||+|.+..+ ..||+|.+.+.   ...+.+|+.+++.++||||+++++++     .. .+.|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~-----~~-~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-----SE-EPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEE-----CC-CCcEE
Confidence            34699999999999999999998655 45999998753   24577899999999999999999876     22 23679


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+++ +|.+++....  ...+++..+..++.|++.||.|||+++
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERMN  122 (262)
T ss_pred             EEEcCCCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999995 9999987532  345889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.85  E-value=1.1e-20  Score=165.96  Aligned_cols=116  Identities=28%  Similarity=0.431  Sum_probs=97.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..|++.+.||+|+||.||+|...    .+++.||||.+....     ..+.+|+.+++.++||||+++++++..   ...
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~   80 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG   80 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence            35888999999999999999864    348899999997443     357899999999999999999998733   224


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+.++||||+++ +|.+++...   ...+++..+..++.||+.||+|||+++
T Consensus        81 ~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~  129 (284)
T cd05038          81 RSLRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQR  129 (284)
T ss_pred             CceEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            568899999985 999998753   235899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.85  E-value=7.7e-21  Score=168.32  Aligned_cols=117  Identities=21%  Similarity=0.282  Sum_probs=95.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcC----------------CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeee
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRE----------------TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVAL  140 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~----------------~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~  140 (335)
                      .+|++.+.||+|+||.||+|.+..                ++..+|+|.+....     ..+.+|+.+++.++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            469999999999999999986532                34579999986432     356789999999999999999


Q ss_pred             ceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhh-------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 KHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRI-------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++     .....+|+||||+++ +|.+++......       ...+++..+..++.||+.||+|||+++
T Consensus        85 ~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  150 (296)
T cd05095          85 LAVC-----ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN  150 (296)
T ss_pred             EEEE-----ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9998     444558999999985 999998763211       124778899999999999999999998

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.85  E-value=1.1e-20  Score=163.56  Aligned_cols=113  Identities=29%  Similarity=0.418  Sum_probs=96.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCC----cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETG----EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +++.+.||.|+||.||+|.+...+    ..||+|.+....     ..+..|+.+++.++|+||+++++++     .....
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~   75 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVC-----TEEEP   75 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEE-----cCCCe
Confidence            356789999999999999998766    899999996432     3577899999999999999999999     44456


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|++|||++| +|.+++....  ...+++..+..++.||+.||.|||+.+
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~~  123 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESKN  123 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            8999999986 9999987632  122899999999999999999999998

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.85  E-value=1.7e-20  Score=162.87  Aligned_cols=115  Identities=21%  Similarity=0.312  Sum_probs=96.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|++.+.||+|+||.||++.+. .+..+|+|.+....   ..+.+|+.+++.++|+||+++++++.     . ...+
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~~~   76 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EPIY   76 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CCeE
Confidence            3467999999999999999999864 55679999886532   45678999999999999999999983     3 3478


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||+++ +|.+++....  ...+++..+..++.||+.||.|||+.+
T Consensus        77 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~  122 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRN  122 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999985 9999987532  345788899999999999999999988

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.85  E-value=1e-20  Score=170.39  Aligned_cols=119  Identities=21%  Similarity=0.336  Sum_probs=96.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCC-------CcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeee
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRET-------GEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFS  146 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~  146 (335)
                      ...+|++++.||+|+||.||+|++...       +..||+|.+...     ...+.+|+.+++++ +||||+++++++  
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--   87 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGAC--   87 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE--
Confidence            334699999999999999999987432       236899988642     24567899999999 799999999999  


Q ss_pred             CCCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          147 TTDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                         .....++++|||+++ +|.+++.....            ....++...+..++.||+.||.|||+++
T Consensus        88 ---~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g  154 (334)
T cd05100          88 ---TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK  154 (334)
T ss_pred             ---ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence               445568999999985 99999876321            1234788889999999999999999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.85  E-value=2.4e-20  Score=161.99  Aligned_cols=114  Identities=25%  Similarity=0.287  Sum_probs=95.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|.+...||+|+||.||+|.+..+ ..+|+|.+....   ..+.+|+.+++.++||||+++++++     .. ...|+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~-~~~~~   77 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVV-----SE-EPIYI   77 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEE-----cC-CCcEE
Confidence            35699999999999999999998654 469999886432   4567899999999999999999887     22 23679


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+.+ +|.+++....  ...+++..+..++.||+.||.|||+.+
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~  122 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERMN  122 (260)
T ss_pred             EEEcCCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999996 9999987532  345889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.85  E-value=1e-20  Score=165.33  Aligned_cols=120  Identities=18%  Similarity=0.260  Sum_probs=94.8

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCc--EEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGE--IVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELY  154 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~--~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~  154 (335)
                      |.+++.||+|+||.||+|.+..++.  .+|+|.++..      ...+.+|+.+++.++||||++++++++.... .....
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3567899999999999999977765  6999987532      2446789999999999999999998754322 12235


Q ss_pred             EEEEeecchh-hHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYS--RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++|||+.+ +|.+++....  .....+++..+..++.||+.||+|||+++
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~  132 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS  132 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7899999995 9988875322  11245899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.85  E-value=1.8e-20  Score=165.61  Aligned_cols=117  Identities=23%  Similarity=0.362  Sum_probs=97.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+|.+.+.||+|+||.||+|.+.     .++..+|+|.+....    +.+.+|+.+++.++||||+++++++     ...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVC-----GDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEE-----ccC
Confidence            35999999999999999999864     345679999886432    4577999999999999999999998     455


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...++||||+++ +|.+++.....            ....+++..++.++.||+.||.|||+++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  143 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH  143 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            568999999985 99999976321            1234899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.85  E-value=1.4e-20  Score=166.16  Aligned_cols=116  Identities=20%  Similarity=0.366  Sum_probs=95.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+....     ..+.+|+.+++.++||||+++++.+     ...
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGAC-----SQD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecC
Confidence            48889999999999999998753     23579999886432     3467899999999999999999998     445


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhh--------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSR--------------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++|||+.+ +|.+++.....                    ....+++..++.++.|++.||.|||+++
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~  147 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK  147 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            558899999995 99998875321                    1235889999999999999999999988

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.85  E-value=1.6e-20  Score=167.70  Aligned_cols=119  Identities=20%  Similarity=0.353  Sum_probs=97.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcC-------CCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeee
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRE-------TGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFS  146 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~  146 (335)
                      ..++|.+++.||+|+||.||+|++..       ....+|+|.+....     ..+.+|+.+++.+ +||||+++++++  
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--   87 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC--   87 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE--
Confidence            34579999999999999999998642       34579999886432     3466899999999 699999999998  


Q ss_pred             CCCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          147 TTDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                         ....++|++|||+++ +|.+++.....            ....+++..+..++.||+.||.|||++|
T Consensus        88 ---~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g  154 (314)
T cd05099          88 ---TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR  154 (314)
T ss_pred             ---ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence               445568999999995 99999976321            1245889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.85  E-value=1.3e-20  Score=163.37  Aligned_cols=105  Identities=24%  Similarity=0.361  Sum_probs=89.3

Q ss_pred             eeeccCceEEEEEEE--cCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           89 VVGTGSFGVVFQAKC--RETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~--~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      .||+|+||.||+|.+  ..++..+|+|++....      ..+.+|+.+++.++||||+++++++     ... ..++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~-~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC-----EAE-SWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEE-----cCC-CcEEEEe
Confidence            589999999999965  4678899999986432      3467899999999999999999987     322 3679999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+++ +|.+++..    ...+++..+..++.||+.||+|||+++
T Consensus        76 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~  115 (257)
T cd05116          76 LAELGPLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEETN  115 (257)
T ss_pred             cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9995 89998875    567999999999999999999999998

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.85  E-value=1.4e-20  Score=167.22  Aligned_cols=120  Identities=23%  Similarity=0.343  Sum_probs=97.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-------CCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-------ETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFF  145 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~  145 (335)
                      ...++|.+.+.||+|+||.||+|++.       ..+..||+|.+...     ...+.+|+.+++.+ +||||+++++++ 
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-   90 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-   90 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEE-
Confidence            34567999999999999999999853       23457999988642     24567899999999 899999999998 


Q ss_pred             eCCCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          146 STTDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                          .....+|+||||+.+ +|.+++.....            ....++...+..++.||+.||.|||+++
T Consensus        91 ----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g  157 (304)
T cd05101          91 ----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK  157 (304)
T ss_pred             ----ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC
Confidence                445568999999985 99999986321            1235788889999999999999999998

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.85  E-value=1.6e-20  Score=164.86  Aligned_cols=117  Identities=25%  Similarity=0.395  Sum_probs=96.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+|.+.++||+|+||.||+|...     .++..+|+|.+...    ...+.+|+.+++.++|+||+++++++     ...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC-----TEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE-----ecC
Confidence            45889999999999999999753     35678999988643    24577899999999999999999998     444


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhh-----------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRI-----------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~-----------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...|++|||+++ +|.+++......           ...+++..+..++.||+.||+|||+++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~  142 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH  142 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            558999999995 999998753210           135889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.85  E-value=2.5e-20  Score=182.25  Aligned_cols=117  Identities=22%  Similarity=0.311  Sum_probs=99.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+|++.++||+|+||.||+|++..+++.||+|++..+       .+.+.+|+.+++.++||||+++++++     .....
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~-----~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC-----SDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE-----eeCCE
Confidence            4699999999999999999999999999999998642       23567899999999999999999998     55566


Q ss_pred             EEEEeecchh-hHHHHHHHHhh-------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSR-------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~-------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|+||||++| +|.+++.....       ....++...+..++.||+.||+|||+++
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G  133 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG  133 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999999996 99999875321       1234566778899999999999999998

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.84  E-value=2.9e-20  Score=162.22  Aligned_cols=115  Identities=23%  Similarity=0.357  Sum_probs=96.2

Q ss_pred             eEEeeeeeccCceEEEEEEEcC-CCcEEEEEEecccc--------------hhHHHHHHHHHh-CCCCceeeeceeeeeC
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRE-TGEIVAIKKVLQDK--------------RYKNRELQIMQM-LDHPNIVALKHCFFST  147 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~--------------~~~~~Ei~~l~~-l~hpnIv~~~~~~~~~  147 (335)
                      |++.+.||+|+||.||+|.+.. +++.+|+|.+....              ..+.+|+.++.. ++||||+++++++   
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~---   78 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTF---   78 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeE---
Confidence            8889999999999999999987 68899999885211              235578888765 6999999999999   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                        ....++|+||||++| +|.+++.........+++..++.++.|++.||.|||+ .+
T Consensus        79 --~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  134 (269)
T cd08528          79 --LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR  134 (269)
T ss_pred             --ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc
Confidence              555679999999996 9999887654445679999999999999999999996 44

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.84  E-value=3.8e-20  Score=161.59  Aligned_cols=113  Identities=27%  Similarity=0.366  Sum_probs=94.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCC---CcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|.+.+.||+|+||.||+|.+...   ...||||.+....     +.+.+|+.+++.++||||+++++++.     .. 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~-   79 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-----EN-   79 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-----CC-
Confidence            4599999999999999999997544   4569999886432     35678999999999999999999883     22 


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..|+||||+++ +|.+++...   ...+++..++.++.||+.||+|||+.+
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~  127 (270)
T cd05056          80 PVWIVMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESKR  127 (270)
T ss_pred             CcEEEEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            26799999985 999998752   335899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.84  E-value=1.9e-21  Score=168.75  Aligned_cols=108  Identities=19%  Similarity=0.221  Sum_probs=89.5

Q ss_pred             eeeeccCceEEEEEEEcCCCc-------EEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           88 HVVGTGSFGVVFQAKCRETGE-------IVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~-------~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +.||+|+||.||+|.++.++.       .+|+|.+....    ..+..|+.+++.++||||+++++++.     ...+.+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCV-----CGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEE-----eCCCcE
Confidence            469999999999999866544       38888875432    34678999999999999999999994     334478


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+++ +|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus        76 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDKG  120 (258)
T ss_pred             EEEecCCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999995 999998752   235899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2e-22  Score=178.96  Aligned_cols=196  Identities=19%  Similarity=0.235  Sum_probs=152.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .++.++..||-|+||.|-++........+|+|++++.       ...+..|-.||..++.|.||++|..|     .+..|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~ky  494 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSKY  494 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccchh
Confidence            4577889999999999999998766667999998752       24567899999999999999999999     88899


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------c
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------V  204 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------~  204 (335)
                      +|++||-|=| .|+.+|+.    ++.|.+..+++|+..+++|++|||++|                             +
T Consensus       495 vYmLmEaClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki  570 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI  570 (732)
T ss_pred             hhhhHHhhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh
Confidence            9999999875 99999987    889999999999999999999999999                             2


Q ss_pred             ChHHhHhhhcCCCCHHHhh------------------------hhCCCCCCCC----CCCCCCCccccccccCCChHHHH
Q 019844          205 DQLVEIIKVLGTPTREEIK------------------------CMNPNYTEFK----FPQIKPHPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       205 ~~~~~~~~~~g~~~~~~~~------------------------~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~~~  256 (335)
                      ....+.+++||||.|....                        .+.|+|....    +..+....-...+|..++..+.+
T Consensus       571 ~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~  650 (732)
T KOG0614|consen  571 GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATD  650 (732)
T ss_pred             ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHH
Confidence            2233455678887643221                        1222222110    00000111112356788999999


Q ss_pred             HHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ||+++...+|.+|..     +.+|-+|.||..++|
T Consensus       651 Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw  685 (732)
T KOG0614|consen  651 LIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW  685 (732)
T ss_pred             HHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence            999999999999996     899999999999877

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.84  E-value=2.9e-20  Score=160.86  Aligned_cols=112  Identities=22%  Similarity=0.393  Sum_probs=95.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      .+|++.+.||+|+||.||++..  +++.||+|.+...  ...+.+|+.+++.++||||+++++++.     .. ..++||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~-~~~~v~   77 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVIL-----HN-GLYIVM   77 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEc-----CC-CcEEEE
Confidence            4699999999999999999874  6889999998643  345778999999999999999999883     22 267999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+.| +|.+++....  ...+++..+..++.|++.||.|||+++
T Consensus        78 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (254)
T cd05083          78 ELMSKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESKK  120 (254)
T ss_pred             ECCCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99995 9999987632  345899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=4.4e-20  Score=161.99  Aligned_cols=114  Identities=25%  Similarity=0.389  Sum_probs=97.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCc----EEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|++.+.||+|+||.||+|.++.+|.    .+|+|.+....     ..+.+|+.+++.++||||+++++++..     
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-----   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence            3569999999999999999999877665    58999886432     346689999999999999999999843     


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ...++||||+.+ +|.+++...   ...+++..+..++.||+.||+|||+.+
T Consensus        81 -~~~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~  129 (279)
T cd05057          81 -SQVQLITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEKR  129 (279)
T ss_pred             -CceEEEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             347899999985 999988753   345899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.84  E-value=2.8e-20  Score=161.79  Aligned_cols=108  Identities=15%  Similarity=0.134  Sum_probs=86.8

Q ss_pred             eeeeccCceEEEEEEEcC------------CCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           88 HVVGTGSFGVVFQAKCRE------------TGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~------------~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      +.||+|+||.||+|....            ....+|+|.+....    ..+.+|+.+++.++||||+++++++.     .
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~-----~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCV-----R   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c
Confidence            368999999999998532            23358999875432    34567899999999999999999983     4


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....++||||+++ +|..++...   ...+++..++.++.||+.||+|||+++
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDKD  125 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            4447899999996 887776541   356899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.84  E-value=3.4e-20  Score=160.05  Aligned_cols=107  Identities=24%  Similarity=0.389  Sum_probs=92.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ++||.|+||.||+|.+.. ++.||+|.+...     ...+.+|+.+++.++||||+++++++     ....+.++||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC-----VQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE-----ecCCCeEEEEEcC
Confidence            469999999999999977 999999988643     23567899999999999999999998     4455689999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +| +|.+++...   ...+++..+..++.|++.||.|||+++
T Consensus        75 ~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~~  113 (251)
T cd05041          75 PGGSLLTFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESKN  113 (251)
T ss_pred             CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            86 898888652   346889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.84  E-value=3.5e-20  Score=160.53  Aligned_cols=108  Identities=28%  Similarity=0.333  Sum_probs=91.2

Q ss_pred             eeeeccCceEEEEEEEcC-CC--cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRE-TG--EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~-~~--~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.+.. .+  ..||||.+....     +.+.+|+.++++++||||+++++.+.     . ..+++||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence            468999999999999865 33  369999997543     35678999999999999999999983     3 5689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+++ +|.+.+....  ...+++..++.++.|++.||.|||+++
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~  117 (257)
T cd05040          75 ELAPLGSLLDRLRKDA--LGHFLISTLCDYAVQIANGMRYLESKR  117 (257)
T ss_pred             EecCCCcHHHHHHhcc--cccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence            99985 9999988632  146899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.84  E-value=1.6e-20  Score=165.03  Aligned_cols=116  Identities=20%  Similarity=0.264  Sum_probs=95.4

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCC-----CcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRET-----GEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      +|.+.+.||+|+||.||+|.+..+     ++.||+|++....     ..+.+|+.++..++||||+++++++     ...
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~~   80 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVV-----TKE   80 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----cCC
Confidence            588899999999999999987543     5789999996432     3467899999999999999999998     444


Q ss_pred             cEEEEEeecchh-hHHHHHHHHh------------hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYS------------RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++++||+.+ +|.+++....            .....+++..++.++.|++.||.|||+++
T Consensus        81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g  144 (283)
T cd05091          81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH  144 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC
Confidence            558899999995 9998885311            11235888899999999999999999988

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.84  E-value=5.4e-20  Score=159.58  Aligned_cols=106  Identities=25%  Similarity=0.324  Sum_probs=88.6

Q ss_pred             eeeccCceEEEEEEEc--CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeec
Q 019844           89 VVGTGSFGVVFQAKCR--ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      .||+|+||.||+|.++  .++..||+|++....     ..+.+|+.+++.++||||+++++++     .. ..+++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~-----~~-~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-----EA-EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----cC-CCeEEEEEe
Confidence            4899999999999875  445679999986432     3467899999999999999999987     22 247899999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        76 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  115 (257)
T cd05115          76 ASGGPLNKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGKN  115 (257)
T ss_pred             CCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            985 999888642   456899999999999999999999998

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.83  E-value=6.5e-20  Score=160.94  Aligned_cols=114  Identities=21%  Similarity=0.326  Sum_probs=95.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCc----EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|++.+.||+|+||.||+|.+..++.    .||+|.+...     ...+.+|+.+++.++||||+++++++..     
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-----   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence            4569999999999999999999877776    4899988532     2356789999999999999999998842     


Q ss_pred             ccEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ...+++|||++ |+|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~  129 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEVR  129 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             12668999998 4998888752   346899999999999999999999998

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.83  E-value=5.6e-20  Score=160.58  Aligned_cols=111  Identities=26%  Similarity=0.443  Sum_probs=91.2

Q ss_pred             eeeeccCceEEEEEEEcCCCc--EEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRETGE--IVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~--~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|++..++.  .+|+|.+...     ...+.+|+.++.++ +||||+++++++     .....+|+||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~-----~~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE-----ecCCCceEEE
Confidence            368999999999999988776  4688887632     23566899999999 899999999999     4455689999


Q ss_pred             ecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+++ +|.+++.....            ....+++..++.++.|++.||+|||+++
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~  132 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  132 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99985 99999875321            1135889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.83  E-value=6.9e-20  Score=157.99  Aligned_cols=107  Identities=24%  Similarity=0.369  Sum_probs=90.6

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ++||+|+||.||+|.. .++..+|+|.+....     ..+.+|+.+++.++||||+++++++     ......++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC-----TQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEE-----ecCCccEEEEECC
Confidence            4699999999999986 468899999886432     3467899999999999999999998     4445588999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +| +|.+++...   ...+++..+..++.|++.||.|||+++
T Consensus        75 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  113 (250)
T cd05085          75 PGGDFLSFLRKK---KDELKTKQLVKFALDAAAGMAYLESKN  113 (250)
T ss_pred             CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            85 998887642   345889999999999999999999988

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.83  E-value=6.2e-20  Score=159.01  Aligned_cols=107  Identities=20%  Similarity=0.210  Sum_probs=90.0

Q ss_pred             eeeeccCceEEEEEEEcCCC----------cEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           88 HVVGTGSFGVVFQAKCRETG----------EIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~----------~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +.||+|+||.||+|.+..++          ..+++|.+...   ...+.+|+.+++.++||||+++++++..      ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR------DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec------CC
Confidence            46999999999999998776          35888877543   3467789999999999999999998843      33


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++||||+++ +|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~  121 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDKK  121 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            6799999995 999988762   226899999999999999999999988

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.83  E-value=8.7e-20  Score=160.20  Aligned_cols=113  Identities=22%  Similarity=0.286  Sum_probs=92.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc----EEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+|++.+.||+|+||+||+|.+..++.    .+|+|.+....     ..+..|+.+++.++||||+++++++     .. 
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~-----~~-   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGIC-----PG-   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEE-----CC-
Confidence            469999999999999999999987776    47777774321     3455677888999999999999987     22 


Q ss_pred             cEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++|||++ |+|.+++...   .+.+++..+..++.||+.||.|||+++
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEHR  129 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            23668999998 5999998752   356899999999999999999999988

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.82  E-value=1.7e-19  Score=157.36  Aligned_cols=111  Identities=18%  Similarity=0.239  Sum_probs=88.9

Q ss_pred             eeeeccCceEEEEEEEcCC--CcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRET--GEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~--~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||++.....  ...+++|.+...     ...+.+|+.+++.++||||+++++.+     .....+|+|||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~-----~~~~~~~lv~e   75 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQC-----VEAIPYLLVFE   75 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEe-----cCCCccEEEEe
Confidence            3699999999999976433  235677766532     24577899999999999999999999     44556899999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+++ +|.+++.........+++..++.++.||+.||+|||+++
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~  119 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN  119 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            9995 999999764322345777888999999999999999988

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.82  E-value=2.7e-19  Score=156.15  Aligned_cols=111  Identities=21%  Similarity=0.299  Sum_probs=88.9

Q ss_pred             eeeeccCceEEEEEEEcC--CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCRE--TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||+|....  ....+|+|.+....     ..+.+|+.+++.++||||+++++.+     .....+|+|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~-----~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC-----IESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE-----CCCCceEEEEE
Confidence            369999999999997533  34578889875321     3467899999999999999999998     44556899999


Q ss_pred             cchh-hHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPE-TVNRIARNYSRI-HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+++ +|.+++...... ...+++..++.++.||+.||+|||+++
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD  120 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            9995 999999764321 233567888999999999999999998

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.82  E-value=4.8e-20  Score=160.74  Aligned_cols=111  Identities=19%  Similarity=0.267  Sum_probs=91.3

Q ss_pred             eeeeccCceEEEEEEEcCCC------cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           88 HVVGTGSFGVVFQAKCRETG------EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~------~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +.||+|+||.||+|.++...      +.+|+|.+.+.     ...+.+|+.+++.++||||+++++++     ......+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC-----LLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeee-----cCCCCeE
Confidence            36899999999999986544      68999988542     23567899999999999999999998     4444589


Q ss_pred             EEeecchh-hHHHHHHHHhhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRI---HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++......   ...+++..+..++.||+.||.|||+++
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH  126 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999995 999998753221   245788999999999999999999988

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.82  E-value=2.7e-19  Score=156.12  Aligned_cols=111  Identities=20%  Similarity=0.191  Sum_probs=89.9

Q ss_pred             eeeeccCceEEEEEEEc--CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           88 HVVGTGSFGVVFQAKCR--ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +.||+|+||.||+|...  .++..+|+|.+....     ..+.+|+.+++.++||||+++++++     .....+++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC-----TEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCCcEEEEE
Confidence            36899999999999864  355679999886432     3567899999999999999999998     44555889999


Q ss_pred             cchh-hHHHHHHHHhhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPE-TVNRIARNYSRI-HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+++ +|.+++...... ....++..++.++.|++.||.|||+.+
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN  120 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            9995 999999753321 234667788899999999999999988

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.82  E-value=2e-19  Score=171.53  Aligned_cols=121  Identities=20%  Similarity=0.188  Sum_probs=82.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCC----CcEEEEEEecccchhHHHHHHH---HHhCCCCceeeeceeeeeCCC-CC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRET----GEIVAIKKVLQDKRYKNRELQI---MQMLDHPNIVALKHCFFSTTD-KE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~----~~~vAvK~i~~~~~~~~~Ei~~---l~~l~hpnIv~~~~~~~~~~~-~~  151 (335)
                      ..++|.+.+.||+|+||.||+|.+..+    +..||+|++.....   .|+.+   ++...+.+++.+...|..... ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~  206 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNERVRRACPNSCADFVYGFLEPVSSKK  206 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHHHHHhhchhhHHHHHHhhhccccccc
Confidence            456899999999999999999999988    89999998864321   22222   222233444444433322111 34


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhh----------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSR----------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~----------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++||||+++ +|.+++.....                ......+..++.|+.||+.||.|||+++
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g  275 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG  275 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC
Confidence            4568899999996 99998864210                0011224457789999999999999998

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.82  E-value=7.9e-20  Score=186.57  Aligned_cols=108  Identities=25%  Similarity=0.349  Sum_probs=94.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      .|.....||+|+||.||+|+++.++..||||.+.........|+.++++++|||||++++++.     .....|+|||||
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~-----~~~~~~lv~Ey~  765 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCR-----SEKGAYLIHEYI  765 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEE-----cCCCCEEEEeCC
Confidence            466778999999999999999999999999999765555567899999999999999999994     344588999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +| +|.+++..       +++..+..|+.||+.||+|||..
T Consensus       766 ~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~  799 (968)
T PLN00113        766 EGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCR  799 (968)
T ss_pred             CCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccC
Confidence            95 99999863       78899999999999999999943

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.81  E-value=1.9e-19  Score=156.41  Aligned_cols=109  Identities=20%  Similarity=0.293  Sum_probs=87.6

Q ss_pred             eeeeccCceEEEEEEEcC---CCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +.||+|+||.||+|.+..   .+..+|+|.+...     ...+.+|+.+++.++||||+++++++..    .....++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence            468999999999998753   3457999988532     2356689999999999999999997642    233477999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+.+ +|.+++...   ...+++..+..++.||+.||.|||+.+
T Consensus        77 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  118 (262)
T cd05058          77 PYMKHGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASKK  118 (262)
T ss_pred             ecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99995 999998752   234677888899999999999999988

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.81  E-value=2.5e-19  Score=159.26  Aligned_cols=114  Identities=24%  Similarity=0.342  Sum_probs=94.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCc----EEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|+..+.||+|+||.||+|.+..++.    .+|+|.+....     ..+.+|+.+++.++||||+++++++..     
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-----   80 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-----   80 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence            4568999999999999999999987776    47888876432     246789999999999999999998842     


Q ss_pred             ccEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      . ..++++||++ |+|.+++...   ...+++..+..++.||+.||.|||+++
T Consensus        81 ~-~~~~v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~  129 (303)
T cd05110          81 P-TIQLVTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEERR  129 (303)
T ss_pred             C-CceeeehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhcC
Confidence            1 2568999999 5998888752   335899999999999999999999998

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.81  E-value=2.2e-19  Score=148.55  Aligned_cols=195  Identities=18%  Similarity=0.288  Sum_probs=138.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .++.+.+..||.|+.|+|++++++.+|..+|||.+.+.     .+++...+.++... +.|+||+.+++|....+     
T Consensus        91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d-----  165 (391)
T KOG0983|consen   91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD-----  165 (391)
T ss_pred             hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch-----
Confidence            34577789999999999999999999999999999653     25566777776655 58999999999976554     


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cChHHh-----------------------
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--VDQLVE-----------------------  209 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--~~~~~~-----------------------  209 (335)
                      ++|.||.|...+..+++..   .++++|..+-.+...++.||.||..+.  ++...+                       
T Consensus       166 V~IcMelMs~C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrl  242 (391)
T KOG0983|consen  166 VFICMELMSTCAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRL  242 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccccee
Confidence            8899999998778877764   567999999999999999999998776  000000                       


Q ss_pred             -----HhhhcCCCCHHHhhhhCCCCCCCCCCCCCCCccc---------------------------------cccc--cC
Q 019844          210 -----IIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWH---------------------------------KVFQ--KR  249 (335)
Q Consensus       210 -----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~--~~  249 (335)
                           .....|.+.|.......|+-.  .-..+..+.|.                                 ..++  ..
T Consensus       243 vdSkAhtrsAGC~~YMaPERidp~~~--~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~g  320 (391)
T KOG0983|consen  243 VDSKAHTRSAGCAAYMAPERIDPPDK--PKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMG  320 (391)
T ss_pred             ecccccccccCCccccCccccCCCCC--CccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccC
Confidence                 011123333322222222100  00011111221                                 1111  24


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +|+.+.+|+..||+.|+.+||...++|+|||+..+.
T Consensus       321 FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  321 FSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             cCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            899999999999999999999999999999987653

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.81  E-value=6.2e-20  Score=170.66  Aligned_cols=187  Identities=21%  Similarity=0.299  Sum_probs=137.9

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEecc-----cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQ-----DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~-----~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...+.++||.|.||.|++|+.+..|+   .||||.++.     ....+..|..||-+++||||++|.++.     ....-
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV-----Tks~P  704 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV-----TKSKP  704 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE-----ecCce
Confidence            46788999999999999999987775   599999973     345688999999999999999999998     44455


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------cChHHhHhhhcCCCC--
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------VDQLVEIIKVLGTPT--  218 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------~~~~~~~~~~~g~~~--  218 (335)
                      +.||+|||+ |+|..+|+.+   .+.|+..+...+++.|+.||+||-+++             ...+......+|...  
T Consensus       705 vMIiTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvl  781 (996)
T KOG0196|consen  705 VMIITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  781 (996)
T ss_pred             eEEEhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeec
Confidence            899999999 6999999975   466999999999999999999999988             111122222233211  


Q ss_pred             -------------HHHhhhhCCCCCCCCCCCCCCCccc---------------------------------cccccCCCh
Q 019844          219 -------------REEIKCMNPNYTEFKFPQIKPHPWH---------------------------------KVFQKRLPP  252 (335)
Q Consensus       219 -------------~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~s~  252 (335)
                                   ...+.+..|+...|.......+.|.                                 .+-|-++|.
T Consensus       782 edd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~  861 (996)
T KOG0196|consen  782 EDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPA  861 (996)
T ss_pred             ccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcH
Confidence                         0112222333222221111122221                                 223457899


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhc
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACV  277 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~  277 (335)
                      .+..|+..||++|-.+||++.||+.
T Consensus       862 aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  862 ALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             HHHHHHHHHHHHHhhcCCCHHHHHH
Confidence            9999999999999999999999886

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.81  E-value=2.2e-19  Score=168.20  Aligned_cols=113  Identities=24%  Similarity=0.371  Sum_probs=92.0

Q ss_pred             eEEeeeeeccCceE-EEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEEee
Q 019844           84 YIAEHVVGTGSFGV-VFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        84 y~~~~~lG~G~fg~-V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      |.-.+++|.|+-|+ ||+|...  |+.||||.+..+. ..+.|||.+|+.- +|||||++|+.-     .+..++||..|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YIalE  583 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYIALE  583 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEEEeh
Confidence            55567899999995 8999984  8899999986554 4788999999999 599999999887     78889999999


Q ss_pred             cchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|..+|.+++...............+..+.|++.||++||+.+
T Consensus       584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~  626 (903)
T KOG1027|consen  584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK  626 (903)
T ss_pred             HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence            9999999999873111111111456788999999999999987

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.81  E-value=8.4e-20  Score=167.97  Aligned_cols=114  Identities=24%  Similarity=0.286  Sum_probs=95.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCC---cEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETG---EIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+.++.++||+|.||+|+.|.+...+   ..||||+++.+.     ..+.+|+.+|.+|+|||+|++|++..+.      
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------  183 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------  183 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------
Confidence            34677899999999999999986533   359999997543     5688999999999999999999998531      


Q ss_pred             EEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      -+.+|||+++ |+|.+-|+..  ....|.......|+.||+.||.||.+++
T Consensus       184 p~mMV~ELaplGSLldrLrka--~~~~llv~~Lcdya~QiA~aM~YLeskr  232 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRKA--KKAILLVSRLCDYAMQIAKAMQYLESKR  232 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhhc--cccceeHHHHHHHHHHHHHHHHHHhhhh
Confidence            2669999999 6998888762  2567888899999999999999999988

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=7.7e-19  Score=158.20  Aligned_cols=117  Identities=24%  Similarity=0.405  Sum_probs=98.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..++|.-...||+|+||.||+|... +|..||||++...    .+.+.+|+.++.+++|||+|+++|||.....    ..
T Consensus        73 AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~~  147 (361)
T KOG1187|consen   73 ATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE----HR  147 (361)
T ss_pred             HHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc----eE
Confidence            4457888899999999999999984 4589999988642    3569999999999999999999999943221    47


Q ss_pred             EEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||+|||+ |+|.+.+.....  ..+++.....|+.+++.||+|||...
T Consensus       148 ~LVYEym~nGsL~d~L~~~~~--~~L~W~~R~kIa~g~A~gL~yLH~~~  194 (361)
T KOG1187|consen  148 LLVYEYMPNGSLEDHLHGKKG--EPLDWETRLKIALGAARGLAYLHEGC  194 (361)
T ss_pred             EEEEEccCCCCHHHHhCCCCC--CCCCHHHHHHHHHHHHHHHHHHccCC
Confidence            79999999 699999986221  17899999999999999999999865

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.80  E-value=4.3e-19  Score=155.06  Aligned_cols=120  Identities=20%  Similarity=0.294  Sum_probs=94.0

Q ss_pred             eEEeeeeeccCceEEEEEEEcC---CCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc-c
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE-L  153 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~-~  153 (335)
                      |.+.+.||+|+||.||+|.++.   +++.||||++..+      ...+.+|+.+++.++||||+++++++........ .
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            6678899999999999998653   5789999998643      2346789999999999999999998854332221 2


Q ss_pred             EEEEEeecch-hhHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVP-ETVNRIARNYS--RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~-g~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++++||+. |+|.+++....  .....+++..++.++.||+.||+|||+++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~  133 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN  133 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3578899998 49988775321  11235789999999999999999999988

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.80  E-value=4.8e-19  Score=158.11  Aligned_cols=116  Identities=26%  Similarity=0.395  Sum_probs=103.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCC------CceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDH------PNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~h------pnIv~~~~~~~~~~~~~~  152 (335)
                      .+|.+....|+|-|++|..|.+...|..||||+|..+.   +.-.+|++||++|+.      -|+++|+..|     ...
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F-----~hk  506 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF-----KHK  506 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh-----hhc
Confidence            48999999999999999999999999999999998654   445689999999943      4899999999     778


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++|||+|-+.-+|..+|+.++++ -.|....|+.|+.||..||..|-..|
T Consensus       507 nHLClVFE~LslNLRevLKKyG~n-vGL~ikaVRsYaqQLflALklLK~c~  556 (752)
T KOG0670|consen  507 NHLCLVFEPLSLNLREVLKKYGRN-VGLHIKAVRSYAQQLFLALKLLKKCG  556 (752)
T ss_pred             ceeEEEehhhhchHHHHHHHhCcc-cceeehHHHHHHHHHHHHHHHHHhcC
Confidence            889999999999999999998764 45999999999999999999999887

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.80  E-value=2.3e-18  Score=160.76  Aligned_cols=124  Identities=17%  Similarity=0.166  Sum_probs=88.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc----------------CCCcEEEEEEecccc------------------hhHHHH
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR----------------ETGEIVAIKKVLQDK------------------RYKNRE  125 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~----------------~~~~~vAvK~i~~~~------------------~~~~~E  125 (335)
                      ..++|.+.++||+|+||+||+|...                ..++.||||.+....                  .....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4568999999999999999999752                345679999985321                  112347


Q ss_pred             HHHHHhCCCCce-----eeeceeeeeCCC---CCccEEEEEeecchh-hHHHHHHHHhh--------------------h
Q 019844          126 LQIMQMLDHPNI-----VALKHCFFSTTD---KEELYLNLVLEYVPE-TVNRIARNYSR--------------------I  176 (335)
Q Consensus       126 i~~l~~l~hpnI-----v~~~~~~~~~~~---~~~~~~~iv~e~~~g-~L~~~l~~~~~--------------------~  176 (335)
                      +.++.+++|.++     ++++++|.....   ..+...|+||||+++ +|.+++.....                    .
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777788876554     667777643211   123457899999995 99998864210                    0


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          177 HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       177 ~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++..++.++.||+.||.|||+++
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~  329 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIG  329 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            123466788999999999999999988

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.78  E-value=5.1e-19  Score=154.38  Aligned_cols=111  Identities=26%  Similarity=0.435  Sum_probs=98.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC---CCcEEEEEEecc--cchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQ--DKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~--~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...|.+.++||.|+|++||++.+..   ..+.||+|.|..  ...++..|+++|..+ .+.||+++.+++     .++..
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~-----rnnd~  109 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCF-----RNNDQ  109 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhh-----ccCCe
Confidence            3459999999999999999999987   788999999853  346788999999999 699999999999     77777


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++||||++. +..++...       ++..+++.|++.++.||.++|.+|
T Consensus       110 v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~G  152 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKNG  152 (418)
T ss_pred             eEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhccC
Confidence            9999999996 66666654       788999999999999999999998

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.77  E-value=6.8e-19  Score=164.61  Aligned_cols=111  Identities=27%  Similarity=0.404  Sum_probs=94.9

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCc----EEEEEEecc-----cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQ-----DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~-----~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+..++||.|+||+||+|.+...|+    +||+|++..     ....+..|+-+|..|+|||++++++++....      
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence            5567899999999999999876655    589998853     2356789999999999999999999984322      


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.||++|++ |+|.++++..   +..+.......|..||+.||.|||.++
T Consensus       772 ~qlvtq~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~qr  818 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQR  818 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhcc
Confidence            669999999 6999999974   567899999999999999999999887

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.77  E-value=3.6e-18  Score=145.92  Aligned_cols=101  Identities=36%  Similarity=0.540  Sum_probs=88.6

Q ss_pred             CceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh-hHH
Q 019844           94 SFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVN  167 (335)
Q Consensus        94 ~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~  167 (335)
                      +||.||+|.+..+++.+|+|++...     .+.+.+|+..++.++|+||+++++++.     .....+++|||+++ +|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFE-----DEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhee-----eCCEEEEEEeCCCCCCHH
Confidence            5899999999988999999998643     356789999999999999999999984     44568899999997 999


Q ss_pred             HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          168 RIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       168 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++..    ...+++..++.++.+++.||.|||..+
T Consensus        76 ~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~  107 (244)
T smart00220       76 DLLKK----RGRLSEDEARFYARQILSALEYLHSNG  107 (244)
T ss_pred             HHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            98876    334899999999999999999999988

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.76  E-value=7.4e-19  Score=144.89  Aligned_cols=202  Identities=18%  Similarity=0.273  Sum_probs=139.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-----cchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----DKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++.+-+..||.|+||+|++..++.+|+..|||.|+.     +.+++..|.+...+- +.||||++|++.+...+     +
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd-----c  138 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD-----C  138 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc-----e
Confidence            345667899999999999999999999999999963     346677888865555 78999999999965544     8


Q ss_pred             EEEeecchhhHHHHHHH-HhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------
Q 019844          156 NLVLEYVPETVNRIARN-YSRIHQRMPLIYVKLYTYQICRALAYIHNCI-------------------------------  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~-~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-------------------------------  203 (335)
                      ||-||+|+-+|..+.+. +.....+++|.-+-.|....+.||+||-..-                               
T Consensus       139 WiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL  218 (361)
T KOG1006|consen  139 WICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL  218 (361)
T ss_pred             eeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence            99999999776665543 2334667999999999999999999997543                               


Q ss_pred             cChHHhHhhhcCCCCHHHhhhhCCCCCCCC----------------CCCCCCCcccccc----------------c---c
Q 019844          204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFK----------------FPQIKPHPWHKVF----------------Q---K  248 (335)
Q Consensus       204 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~----------------~---~  248 (335)
                      ++.... ....|..++.......|.-..|.                -...+-..|...|                +   -
T Consensus       219 v~SiAk-T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~  297 (361)
T KOG1006|consen  219 VDSIAK-TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECV  297 (361)
T ss_pred             HHHHHh-hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccccc
Confidence            111111 11122222222222222111110                0011111222111                1   2


Q ss_pred             CCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          249 RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       249 ~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      .++..+..+|.-||.+|-+.||...+++.+||++.+-....
T Consensus       298 ~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~  338 (361)
T KOG1006|consen  298 HYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGP  338 (361)
T ss_pred             ccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCC
Confidence            47889999999999999999999999999999988755433

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.75  E-value=9e-19  Score=161.78  Aligned_cols=119  Identities=24%  Similarity=0.319  Sum_probs=99.6

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-----cchhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----DKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~~i  157 (335)
                      |...+.||+|+||.||+++++.+|+.||||.+++     ......+|+++|++|+|||||+++++-.+... --...-.+
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            7788999999999999999999999999999964     34567799999999999999999887622110 00223469


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||.| ||...|..- ++..+|+|.++..++..++.||.|||.+|
T Consensus        95 vmEyC~gGsL~~~L~~P-EN~~GLpE~e~l~lL~d~~~al~~LrEn~  140 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSP-ENAYGLPESEFLDLLSDLVSALRHLRENG  140 (732)
T ss_pred             EEeecCCCcHHHHhcCc-ccccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            9999996 999999853 34567999999999999999999999998

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.75  E-value=1.6e-17  Score=162.21  Aligned_cols=113  Identities=19%  Similarity=0.293  Sum_probs=101.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|.++++||+|+||.||+|.+..+++.||||++.+..       ..+.+|+.+++.++||||+++++++     ....+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECCE
Confidence            46999999999999999999999999999999996432       4577899999999999999999988     55667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||||+.| +|.+++..    .+.+++..++.|+.||+.||.|||.++
T Consensus        79 ~~lVmEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~g  124 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRHG  124 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999986 99999876    456899999999999999999999988

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.74  E-value=2.9e-18  Score=154.90  Aligned_cols=116  Identities=25%  Similarity=0.311  Sum_probs=104.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhCC---CCceeeecee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQMLD---HPNIVALKHC  143 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l~---hpnIv~~~~~  143 (335)
                      ....+|..++.+|.|+||.|++|.++.....|+||.|.|++            -.+..||+||..|+   |+||++++++
T Consensus       558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            34446999999999999999999999999999999997653            12457999999997   9999999999


Q ss_pred             eeeCCCCCccEEEEEeecch-h-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          144 FFSTTDKEELYLNLVLEYVP-E-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       144 ~~~~~~~~~~~~~iv~e~~~-g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |     +++.++||+||--. | ||++++..    +.+++|.+++.|++||+.|+++||+++
T Consensus       638 F-----Eddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~~  690 (772)
T KOG1152|consen  638 F-----EDDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQG  690 (772)
T ss_pred             e-----ecCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhccccccccC
Confidence            9     88889999999877 7 99999997    788999999999999999999999999

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.73  E-value=1.4e-16  Score=141.05  Aligned_cols=117  Identities=18%  Similarity=0.240  Sum_probs=87.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCC---CcEEEEEEecccchhHH---------------HHHHHHHhCCCCceeeecee
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQDKRYKN---------------RELQIMQMLDHPNIVALKHC  143 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~~~~~---------------~Ei~~l~~l~hpnIv~~~~~  143 (335)
                      .+|.+.+.||+|+||.||+|.+..+   +..+|+|+.........               .+...+..++|+||++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            4699999999999999999999877   66788886532221111               22334556689999999997


Q ss_pred             eeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       144 ~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..... ....+.+++|+++..++.+++..    ....++..++.|+.||+.||+|||+++
T Consensus        92 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~  146 (294)
T PHA02882         92 GSFKR-CRMYYRFILLEKLVENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEHG  146 (294)
T ss_pred             eeEec-CCceEEEEEEehhccCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            64332 22335678999988777777664    334688899999999999999999988

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.73  E-value=8e-17  Score=134.23  Aligned_cols=106  Identities=32%  Similarity=0.516  Sum_probs=93.5

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE  164 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g  164 (335)
                      ||.|++|.||++.+..+++.+++|++....     ..+.+|+.+++.+.|++|+++++++     ......+++||+++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVF-----EDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeee-----ecCCeEEEEEecCCC
Confidence            689999999999998889999999997653     4588999999999999999999999     444568899999995


Q ss_pred             -hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          165 -TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       165 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       +|.+++...   ...+++..++.++.+++.+|.|||+.+
T Consensus        76 ~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~  112 (215)
T cd00180          76 GSLKDLLKEN---EGKLSEDEILRILLQILEGLEYLHSNG  112 (215)
T ss_pred             CcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             999988752   146899999999999999999999998

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.70  E-value=6e-17  Score=156.04  Aligned_cols=117  Identities=24%  Similarity=0.348  Sum_probs=94.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcC-------CCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRE-------TGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      .+..+.+.||.|+||.|++|....       ....||||.++..     .+.+..|+.+|+.+ .|+||+.+.+++    
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~----  371 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC----  371 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee----
Confidence            345677799999999999997531       1457999988642     35678999999999 599999999999    


Q ss_pred             CCCccEEEEEeecch-hhHHHHHHHHh---hh-------c--CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVP-ETVNRIARNYS---RI-------H--QRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~-g~L~~~l~~~~---~~-------~--~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+++|+|||. |+|..+++..+   ..       .  ..++..+...+++||+.|++||++..
T Consensus       372 -t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~  438 (609)
T KOG0200|consen  372 -TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP  438 (609)
T ss_pred             -ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC
Confidence             44566899999999 79999998743   00       0  13899999999999999999999887

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.68  E-value=3.3e-16  Score=137.73  Aligned_cols=115  Identities=24%  Similarity=0.293  Sum_probs=95.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-cchhHHHHHHHHHhC--CCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-DKRYKNRELQIMQML--DHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-~~~~~~~Ei~~l~~l--~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ....+..+.+.||+|.||.||+|.++  |+.||||++.. +.....||.+|....  +|+||..|+..=.... ..-..+
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQL  284 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQL  284 (513)
T ss_pred             hhhheeEEEEEecCccccceeecccc--CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEEE
Confidence            34457889999999999999999996  99999999964 455677888877654  9999999887654333 234558


Q ss_pred             EEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          156 NLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       156 ~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      |||++|-+ |+|+++|..     ..++...+..++..++.||++||.
T Consensus       285 wLvTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~  326 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHM  326 (513)
T ss_pred             EEeeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHH
Confidence            99999999 799999995     569999999999999999999994

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.62  E-value=2.1e-16  Score=130.93  Aligned_cols=116  Identities=19%  Similarity=0.260  Sum_probs=99.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...+.|.+.+.||+|-||.+.+|+++.++..+|+|.+++.   .+.+.+|...--.| .|.||+.-|++-+    +...+
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF----qt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAF----QTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHh----hcCce
Confidence            4456799999999999999999999999999999999764   35677898877777 5899999888766    44457


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++|||++ |||..-+..     .++.|...+.++.|+++|+.|||+++
T Consensus        97 YvF~qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHskn  141 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSKN  141 (378)
T ss_pred             EEEeeccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhccc
Confidence            889999999 799877663     55899999999999999999999998

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.60  E-value=2.2e-15  Score=133.54  Aligned_cols=114  Identities=21%  Similarity=0.308  Sum_probs=92.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-cchhHHHHHHHHHh--CCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-DKRYKNRELQIMQM--LDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-~~~~~~~Ei~~l~~--l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      +..++.++||+|.||.||+|+..  ++.||||+++. +...++.|-.|.+.  ++|+||++|+++---.. ....-++||
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~eywLV  286 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRMEYWLV  286 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccceeEE
Confidence            34778899999999999999974  79999999974 34556777666655  58999999988752221 123358899


Q ss_pred             eecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|.+ |+|.++|+.     ..+++.....|+..|++||+|||.-.
T Consensus       287 t~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~  327 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEEL  327 (534)
T ss_pred             eeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccC
Confidence            99999 799999996     45999999999999999999999654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.58  E-value=1e-14  Score=130.82  Aligned_cols=105  Identities=16%  Similarity=0.194  Sum_probs=81.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcC-CCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceee-eceeeeeC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRE-TGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVA-LKHCFFST  147 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~-~~~~~~~~  147 (335)
                      ...++|.+.+.||+|+||+||+|+++. +++.+|||++...         ...+.+|+.+|+.++|+||+. ++++.   
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~---   91 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATG---   91 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcC---
Confidence            344569999999999999999999876 6788899986422         234789999999999999985 44321   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                            ..|+|||||+| +|.. +.       ...   ...++.|++.||.|||++|
T Consensus        92 ------~~~LVmE~~~G~~L~~-~~-------~~~---~~~~~~~i~~aL~~lH~~g  131 (365)
T PRK09188         92 ------KDGLVRGWTEGVPLHL-AR-------PHG---DPAWFRSAHRALRDLHRAG  131 (365)
T ss_pred             ------CcEEEEEccCCCCHHH-hC-------ccc---hHHHHHHHHHHHHHHHHCC
Confidence                  26899999997 7752 11       011   1467899999999999988

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.51  E-value=2.3e-14  Score=124.43  Aligned_cols=121  Identities=17%  Similarity=0.200  Sum_probs=91.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCc-----EEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGE-----IVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ...+|++...++-+|+||.||.|.++....     .+-+|.++...     ..+..|-.++..+.|||+..+.++...  
T Consensus       281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie--  358 (563)
T KOG1024|consen  281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE--  358 (563)
T ss_pred             hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee--
Confidence            345678999999999999999997764332     34556554433     335578888999999999999998864  


Q ss_pred             CCCccEEEEEeecch-hhHHHHHHHHhh----hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVP-ETVNRIARNYSR----IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~-g~L~~~l~~~~~----~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                        +....++++.++. |+|..++...+.    ..+.++-.+...++.|++.|++|||+.+
T Consensus       359 --~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~  416 (563)
T KOG1024|consen  359 --DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG  416 (563)
T ss_pred             --ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC
Confidence              3333567888888 799999984331    1245777788899999999999999998

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.51  E-value=5e-14  Score=116.06  Aligned_cols=105  Identities=16%  Similarity=0.194  Sum_probs=79.4

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------------hh-----------------HHHHHHHHHhCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------------RY-----------------KNRELQIMQMLDHPN  136 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------~~-----------------~~~Ei~~l~~l~hpn  136 (335)
                      ...||+|+||.||+|.+. +|+.||||+++...             ..                 ..+|+.++..+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999996 89999999996431             11                 124999999998877


Q ss_pred             eeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH-HhCC
Q 019844          137 IVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI-HNCI  203 (335)
Q Consensus       137 Iv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yL-H~~~  203 (335)
                      |...+.+.     ...  .+|||||++| ++...+..    ...+++..+..++.||+.+|.|| |+.|
T Consensus        81 v~~p~~~~-----~~~--~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~g  138 (190)
T cd05147          81 IPCPEPIL-----LKS--HVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDCR  138 (190)
T ss_pred             CCCCcEEE-----ecC--CEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            74433332     111  2699999997 55443322    45799999999999999999999 6877

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.51  E-value=2.7e-13  Score=114.47  Aligned_cols=111  Identities=33%  Similarity=0.509  Sum_probs=97.6

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      |.+.+.||.|++|.||++.+..+++.+|+|.+...     ...+.+|+..++.++|+||+++++++     ......+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVF-----EDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeee-----ecCCceEEE
Confidence            56789999999999999999988999999999653     45677899999999999999999998     444558899


Q ss_pred             eecchh-hHHHHHHHHhhhcCC-CCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQR-MPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~-l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|++++ +|.+++..    ... +++..+..++.+++.+|.|||..+
T Consensus        76 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lh~~~  118 (225)
T smart00221       76 MEYCEGGDLFDYLRK----KGGKLSEEEARFYLRQILEALEYLHSLG  118 (225)
T ss_pred             EeccCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999997 99999886    333 899999999999999999999988

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.50  E-value=1.9e-14  Score=137.48  Aligned_cols=191  Identities=19%  Similarity=0.287  Sum_probs=127.1

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEec----ccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~----~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ....++|.|++|.|+.+......+.++.|...    ...      ..+..|..+-..|.|||++.....+....    . 
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~----~-  395 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID----G-  395 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc----c-
Confidence            35789999999999999888777777777553    111      11456777788889999988777774322    1 


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc--------------C---------------
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV--------------D---------------  205 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~--------------~---------------  205 (335)
                      .+-+||||++||+.++..    ...++..++..++.||+.||+|||+.|+              .               
T Consensus       396 ~~~~mE~~~~Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~  471 (601)
T KOG0590|consen  396 ILQSMEYCPYDLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFR  471 (601)
T ss_pred             chhhhhcccHHHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeec
Confidence            333499999999999986    4579999999999999999999999990              0               


Q ss_pred             -----hHHhHhhhcCCCCHHHhhhhCC-CCCCC------------CCCCCCCCccc------------------------
Q 019844          206 -----QLVEIIKVLGTPTREEIKCMNP-NYTEF------------KFPQIKPHPWH------------------------  243 (335)
Q Consensus       206 -----~~~~~~~~~g~~~~~~~~~~~~-~~~~~------------~~~~~~~~~~~------------------------  243 (335)
                           .......++|..+|...+...+ .|.+.            .+. ....+|.                        
T Consensus       472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~-~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~  550 (601)
T KOG0590|consen  472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMI-LGRFPWKVAKKSDNSFKTNNYSDQRNIFEGP  550 (601)
T ss_pred             cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEe-cCCCccccccccccchhhhccccccccccCh
Confidence                 0011122233322111100000 01100            000 0011111                        


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ..+...++.+.+.+|.+||+.||.+|.|+++|++.+||+.+.
T Consensus       551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            011245788999999999999999999999999999999864

>PRK10345 hypothetical protein; Provisional

Probab=99.48  E-value=5.8e-13  Score=110.92  Aligned_cols=107  Identities=19%  Similarity=0.202  Sum_probs=82.3

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhC-----CCCceeeeceeeeeCCCCCccE-
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQML-----DHPNIVALKHCFFSTTDKEELY-  154 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l-----~hpnIv~~~~~~~~~~~~~~~~-  154 (335)
                      .-.+.||+|+||.||.  +..++.. +||++...    .+.+.+|+.+++.+     +||||+++|+++.+..  ...+ 
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v   79 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYV   79 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEE
Confidence            3467899999999995  7666665 69988643    35688999999999     6799999999995432  1234 


Q ss_pred             EEEEeecch---hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHH-HHHHhCC
Q 019844          155 LNLVLEYVP---ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL-AYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~---g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL-~yLH~~~  203 (335)
                      +.+||||++   |+|.+++..     ..+++.  ..++.|++.++ +|||+++
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~~  125 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDNR  125 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHCC
Confidence            347899954   499999964     346666  46688888888 9999999

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.46  E-value=4.2e-13  Score=107.33  Aligned_cols=120  Identities=18%  Similarity=0.322  Sum_probs=102.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-----cchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----DKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+....+..||+|+||.|-+.++..+|...|+|.|..     ..++..+|+.+..+. ..|.+|++|+.++.     .
T Consensus        43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-----e  117 (282)
T KOG0984|consen   43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-----E  117 (282)
T ss_pred             cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----c
Confidence            444556778899999999999999999999999999963     235567888876665 79999999999954     4


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+||.||.|+.+|..+.+...+.++.++|..+-.|+..++.||.|||++-
T Consensus       118 gdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL  168 (282)
T KOG0984|consen  118 GDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL  168 (282)
T ss_pred             ccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh
Confidence            449999999999999888887777889999999999999999999999875

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.45  E-value=5.1e-13  Score=110.33  Aligned_cols=104  Identities=13%  Similarity=0.184  Sum_probs=80.4

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------------------------hhHHHHHHHHHhCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------------------------RYKNRELQIMQMLDHPN  136 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------------------------~~~~~Ei~~l~~l~hpn  136 (335)
                      ...||+|+||.||+|.+. +|+.||||+++...                              ....+|...+.++.|++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            578999999999999987 89999999986431                              01247889999999998


Q ss_pred             eeeeceeeeeCCCCCccEEEEEeecchh-hHHH-HHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          137 IVALKHCFFSTTDKEELYLNLVLEYVPE-TVNR-IARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       137 Iv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~-~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                      |.....+..     ..  .||||||++| ++.. .+.     ...+++..+..++.|++.+|.|||+ .|
T Consensus        81 i~~p~~~~~-----~~--~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~g  138 (190)
T cd05145          81 VPVPEPILL-----KK--NVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEAG  138 (190)
T ss_pred             CCCceEEEe-----cC--CEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            855444432     11  3699999997 3432 233     3468889999999999999999999 77

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.45  E-value=5.6e-13  Score=113.77  Aligned_cols=121  Identities=22%  Similarity=0.261  Sum_probs=104.5

Q ss_pred             CCCccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEec--ccchhHHHHHHHHHhCC-CCceeeeceeeeeCCCCC
Q 019844           75 NGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL--QDKRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        75 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~--~~~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~  151 (335)
                      ++....+..|+++++||+|+||+++.|...-+++.||||.-+  .+..++..|....+.|. .++|..+|.+-     +.
T Consensus        21 s~~~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qe   95 (449)
T KOG1165|consen   21 SGVLMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QE   95 (449)
T ss_pred             CCceEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeec-----cc
Confidence            344466778999999999999999999999999999999754  34567889999999994 69999988877     66


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..|-.+|||+++.+|.+++.-+   ..+|+...+..++.|++.-++|+|++.
T Consensus        96 G~~NiLVidLLGPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~k~  144 (449)
T KOG1165|consen   96 GKYNILVIDLLGPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHEKD  144 (449)
T ss_pred             cchhhhhhhhhCcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHhcc
Confidence            6677799999998888888764   567999999999999999999999998

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.45  E-value=7.8e-13  Score=108.19  Aligned_cols=117  Identities=21%  Similarity=0.267  Sum_probs=100.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc--hhHHHHHHHHHhCCC-CceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--RYKNRELQIMQMLDH-PNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~Ei~~l~~l~h-pnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ....+|.++++||.|+||.+|+|....+|+.||||+-+...  ..+..|..+.+.|++ ..|..++.++     .+..|-
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~~yn   86 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEKDYN   86 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhc-----cccccc
Confidence            45567999999999999999999999999999999876544  457789999999965 6777777777     666777


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|||+++.+|.+++.-.   ..+|+...+..++-|++.-++|+|.++
T Consensus        87 vlVMdLLGPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r~  131 (341)
T KOG1163|consen   87 VLVMDLLGPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLRN  131 (341)
T ss_pred             eeeeeccCccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhhc
Confidence            899999998888888764   356999999999999999999999988

>smart00090 RIO RIO-like kinase

Probab=99.35  E-value=2e-12  Score=110.18  Aligned_cols=110  Identities=14%  Similarity=0.023  Sum_probs=82.0

Q ss_pred             eeEEeeeeeccCceEEEEEE-EcCCCcEEEEEEecccc----------------------------hhHHHHHHHHHhCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAK-CRETGEIVAIKKVLQDK----------------------------RYKNRELQIMQMLD  133 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~-~~~~~~~vAvK~i~~~~----------------------------~~~~~Ei~~l~~l~  133 (335)
                      -|.+.+.||+|+||.||+|. +..+|+.||||++....                            ..+.+|+.+++.+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999 66799999999986321                            12457999999997


Q ss_pred             CCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       134 hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +. ++.+..++..   .  . .++||||++| +|...+..    ...+.+..+..++.||+.+|.|||..|
T Consensus       109 ~~-~i~~p~~~~~---~--~-~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~g  168 (237)
T smart00090      109 EA-GVPVPKPIAW---R--R-NVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKEG  168 (237)
T ss_pred             hc-CCCCCeeeEe---c--C-ceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence            53 2332333311   1  1 4699999998 66554322    345677778899999999999999988

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.34  E-value=1.2e-11  Score=110.88  Aligned_cols=115  Identities=17%  Similarity=0.183  Sum_probs=97.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCC-cEEEEEEecccc----hhHHHHHHHHHhCCC----CceeeeceeeeeCCCCCcc
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETG-EIVAIKKVLQDK----RYKNRELQIMQMLDH----PNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK~i~~~~----~~~~~Ei~~l~~l~h----pnIv~~~~~~~~~~~~~~~  153 (335)
                      +|.+.+.||+|+||.||.|.+..++ ..+|+|......    ..+..|+.++..+..    +++..+++...    ....
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~   94 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED   94 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence            6999999999999999999997774 679999875431    257899999999963    58888888772    2555


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +-||||++++.+|.++.....  .+.++...+..|+.|++.+|++||+.|
T Consensus        95 ~~~iVM~l~G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G  142 (322)
T KOG1164|consen   95 FNFIVMSLLGPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKG  142 (322)
T ss_pred             eeEEEEeccCccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcC
Confidence            678999999999999887654  578999999999999999999999999

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.31  E-value=4.4e-12  Score=110.84  Aligned_cols=66  Identities=21%  Similarity=0.284  Sum_probs=55.5

Q ss_pred             CCCceeeeceeeeeCCC----------------------CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHH
Q 019844          133 DHPNIVALKHCFFSTTD----------------------KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTY  190 (335)
Q Consensus       133 ~hpnIv~~~~~~~~~~~----------------------~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~  190 (335)
                      .|||||++..+|.+.-.                      .....+|+||..++.+|..++..     ...+......++.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~-----~~~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWT-----RHRSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhc-----CCCchHHHHHHHH
Confidence            69999999999864321                      23456899999999999999985     4578888899999


Q ss_pred             HHHHHHHHHHhCC
Q 019844          191 QICRALAYIHNCI  203 (335)
Q Consensus       191 qi~~aL~yLH~~~  203 (335)
                      |+++|+.|||.+|
T Consensus       349 QlLEav~hL~~hg  361 (598)
T KOG4158|consen  349 QLLEAVTHLHKHG  361 (598)
T ss_pred             HHHHHHHHHHHcc
Confidence            9999999999998

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.29  E-value=8.6e-13  Score=109.77  Aligned_cols=111  Identities=15%  Similarity=0.275  Sum_probs=92.5

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..++.+|.....|..|+|++.  |..+++|++..      ..+.+..|.--|+-+.||||+.+++.+     +...++.+
T Consensus       192 lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgac-----nsppnlv~  264 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGAC-----NSPPNLVI  264 (448)
T ss_pred             hhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhc-----cCCCCceE
Confidence            556778899999999999985  55677787642      235678899999999999999999999     55566899


Q ss_pred             Eeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +..||+ |+|+.++....  .-..+..++..++.+|++|+.|||+..
T Consensus       265 isq~mp~gslynvlhe~t--~vvvd~sqav~faldiargmaflhsle  309 (448)
T KOG0195|consen  265 ISQYMPFGSLYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLE  309 (448)
T ss_pred             eeeeccchHHHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcc
Confidence            999999 79999998744  345788899999999999999999876

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.22  E-value=5.2e-11  Score=99.98  Aligned_cols=101  Identities=15%  Similarity=0.226  Sum_probs=80.0

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +.||+|++|.||+|.+  .|..+++|+.....            ..+.+|+.++..+.|++|.....++...     ...
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence            5799999999999987  67889999764211            2356899999999999887766666332     236


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||++| +|.+++..    .   .. ....++.+++.+|.+||..+
T Consensus        75 ~lv~e~~~G~~L~~~~~~----~---~~-~~~~i~~~i~~~l~~lH~~~  115 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINS----N---GM-EELELSREIGRLVGKLHSAG  115 (211)
T ss_pred             EEEEEEeCCcCHHHHHHh----c---cH-HHHHHHHHHHHHHHHHHhCC
Confidence            799999997 99888864    1   12 78899999999999999988

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.21  E-value=1.3e-10  Score=97.38  Aligned_cols=109  Identities=11%  Similarity=0.075  Sum_probs=83.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----h---------hHHHHHHHHHhCCCCceeeeceeeeeC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----R---------YKNRELQIMQMLDHPNIVALKHCFFST  147 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~---------~~~~Ei~~l~~l~hpnIv~~~~~~~~~  147 (335)
                      ..+|++.++||.|+||.||++.+  ++..+|+|++....    .         .+.+|+..+.++.||+|..+.+++...
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            45799999999999999999765  47789999985321    1         156899999999999999999987643


Q ss_pred             CCC---CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          148 TDK---EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       148 ~~~---~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...   .....+|||||++| +|.++..        +++    ....+|+.+|..||..|
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~g  155 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQHG  155 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHcC
Confidence            211   12347899999998 8876632        333    24569999999999998

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.12  E-value=4.5e-11  Score=119.71  Aligned_cols=71  Identities=13%  Similarity=-0.004  Sum_probs=54.3

Q ss_pred             HhCCC-CceeeeceeeeeCCC--CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          130 QMLDH-PNIVALKHCFFSTTD--KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       130 ~~l~h-pnIv~~~~~~~~~~~--~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.+.| +||++++++|-....  .....++++|||++++|.+++...   ...+++.+++.|++||+.||.|||++|
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~g  100 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQG  100 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            34556 688888888722211  122347789999988999999741   356999999999999999999999998

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.11  E-value=2.2e-10  Score=95.24  Aligned_cols=97  Identities=11%  Similarity=0.180  Sum_probs=72.4

Q ss_pred             eeeccCceEEEEEEEcCCCcEEEEEEeccc------------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQD------------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .||+|+||.||++..  ++..+++|.....            ...+.+|+.++..+.|+++....-++...     ...+
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT   73 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence            489999999999985  5788999985421            13456899999999887655444444221     2257


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++...    . .      .++.|++.+|.+||+.+
T Consensus        74 lv~e~~~g~~l~~~~~~~----~-~------~~~~~i~~~l~~lH~~g  110 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEG----N-D------ELLREIGRLVGKLHKAG  110 (199)
T ss_pred             EEEEEECCccHHHHHhhc----H-H------HHHHHHHHHHHHHHHCC
Confidence            99999997 898877541    1 1      78999999999999988

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.02  E-value=1.5e-09  Score=103.79  Aligned_cols=102  Identities=13%  Similarity=0.158  Sum_probs=77.2

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEe-ccc-----------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQD-----------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i-~~~-----------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .|...+.||+|+||.||++.+.  +..+++|+. .+.           ...+.+|+.+++.++|++|+..+.++...   
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~---  408 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP---  408 (535)
T ss_pred             ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC---
Confidence            4567899999999999999874  334444432 111           13466899999999999998876666332   


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                        ...++||||++| +|.+++.            ....++.|++.+|.|||+.+
T Consensus       409 --~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~g  448 (535)
T PRK09605        409 --EEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAG  448 (535)
T ss_pred             --CCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCC
Confidence              226799999997 9988775            24678999999999999988

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.97  E-value=5.4e-10  Score=95.73  Aligned_cols=107  Identities=21%  Similarity=0.306  Sum_probs=81.3

Q ss_pred             EEEEEEEcCCCcEEEEEEec----ccc--hhHHHH--HHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecch-hhHH
Q 019844           97 VVFQAKCRETGEIVAIKKVL----QDK--RYKNRE--LQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVN  167 (335)
Q Consensus        97 ~V~~~~~~~~~~~vAvK~i~----~~~--~~~~~E--i~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~-g~L~  167 (335)
                      .||++.++..|.+|+.-.+.    ++.  +.-.++  ..-|-.+.|-|||+++.+|.+....+.....+++|||. |+|.
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~  160 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK  160 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence            47888887777776654442    111  111122  33455668999999999996655446666889999999 6999


Q ss_pred             HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          168 RIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       168 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|++..+....+....-+.|+-||+.||.|||+..
T Consensus       161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~  196 (458)
T KOG1266|consen  161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD  196 (458)
T ss_pred             HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence            999998888888999999999999999999999876

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.96  E-value=1.7e-09  Score=89.95  Aligned_cols=100  Identities=16%  Similarity=0.095  Sum_probs=75.1

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc--------------------------hhHHHHHHHHHhCCCCc-
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------------------------RYKNRELQIMQMLDHPN-  136 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------------------------~~~~~Ei~~l~~l~hpn-  136 (335)
                      |.+.+.||+|+||.||+|... +|+.||||+++...                          ....+|+.++..+.|++ 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            888899999999999999874 89999999875321                          12457888999997774 


Q ss_pred             -eeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          137 -IVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       137 -Iv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       +...++.         ...++||||++| +|..+..          ......++.+++.++.++|..+
T Consensus        96 ~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~----------~~~~~~~~~~i~~~l~~lh~~g  145 (198)
T cd05144          96 PVPKPIDW---------NRHAVVMEYIDGVELYRVRV----------LEDPEEVLDEILEEIVKAYKHG  145 (198)
T ss_pred             CCCceeec---------CCceEEEEEeCCcchhhccc----------cccHHHHHHHHHHHHHHHHHCC
Confidence             3333321         114799999998 7755432          1345678899999999999987

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.93  E-value=2e-08  Score=89.08  Aligned_cols=111  Identities=34%  Similarity=0.477  Sum_probs=91.9

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCC-ceeeeceeeeeCCCCCccEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHP-NIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hp-nIv~~~~~~~~~~~~~~~~~  155 (335)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+...       ...+.+|+.++..+.|+ +|+++++.+     ......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence            788999999999999999996   88999998632       34477899999999988 799999999     334447


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++++++.| ++.+++...... ..+.+..+..++.|++.++.|+|..+
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~  121 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKG  121 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999996 887666642100 26999999999999999999999988

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.90  E-value=1.2e-08  Score=83.91  Aligned_cols=98  Identities=16%  Similarity=0.169  Sum_probs=74.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc--------hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +.+...|++|+||+||.+..  .+..++.+.+....        ..+.+|+++|++|+ |++|++++++.     .    
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-----~----   72 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-----G----   72 (218)
T ss_pred             cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----C----
Confidence            34578899999999997765  67788877665332        24679999999995 58899988853     2    


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|++|||+.| +|.+.+..          . ...++.|++.+|.+||.+|
T Consensus        73 ~~lvmeyI~G~~L~~~~~~----------~-~~~~~~qi~~~L~~lH~~G  111 (218)
T PRK12274         73 RHLDRSYLAGAAMYQRPPR----------G-DLAYFRAARRLLQQLHRCG  111 (218)
T ss_pred             EEEEEeeecCccHHhhhhh----------h-hHHHHHHHHHHHHHHHHCc
Confidence            6799999998 77543211          1 1357889999999999999

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.90  E-value=1.8e-09  Score=87.84  Aligned_cols=37  Identities=16%  Similarity=0.034  Sum_probs=32.1

Q ss_pred             hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          164 ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       164 g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|.+++...   +..+++.+++.|+.||+.||.|||+++
T Consensus         1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~   37 (176)
T smart00750        1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQA   37 (176)
T ss_pred             CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            6788888752   356999999999999999999999976

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.88  E-value=7.1e-10  Score=102.52  Aligned_cols=190  Identities=22%  Similarity=0.342  Sum_probs=128.5

Q ss_pred             eeeccCceEEEEEEE---cCCCcEEEEEEeccc------chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEEE
Q 019844           89 VVGTGSFGVVFQAKC---RETGEIVAIKKVLQD------KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~---~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ++|+|+||.|++++.   ...|..||+|+.++.      ......|..++..++ ||.+|+++.+|     +....++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyaf-----qt~~kl~l~   75 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAF-----QTDGKLYLI   75 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeee-----ccccchhHh
Confidence            479999999987653   456778999988642      224457888999986 99999999999     555558999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------ChHH-hHhhhcCCCC---HHH
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQLV-EIIKVLGTPT---REE  221 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~~~-~~~~~~g~~~---~~~  221 (335)
                      ++|..| +|...+..    ...+.+..++.+...++.|++++|..++            +... ...+.+|...   ...
T Consensus        76 ld~~rgg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~  151 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK  151 (612)
T ss_pred             hhhcccchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh
Confidence            999996 88776665    5678999999999999999999998870            0000 0000000000   011


Q ss_pred             hhhhCCCCCCCCCCC--CCCCcc----------------------------ccccccCCChHHHHHHHHhccCCCCCCCC
Q 019844          222 IKCMNPNYTEFKFPQ--IKPHPW----------------------------HKVFQKRLPPEAVDLVCRFFQYSPNLRCT  271 (335)
Q Consensus       222 ~~~~~~~~~~~~~~~--~~~~~~----------------------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t  271 (335)
                      ..|++..|.+....+  .....|                            ...+|..++..+.+++..++..+|..|..
T Consensus       152 ~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg  231 (612)
T KOG0603|consen  152 IACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLG  231 (612)
T ss_pred             hcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhc
Confidence            112222222111100  111111                            12345678889999999999999999996


Q ss_pred             -----HHHHhcCcccccCCCC
Q 019844          272 -----ALEACVHPFFDELRDP  287 (335)
Q Consensus       272 -----~~~~L~hp~f~~~~~~  287 (335)
                           +.++++|+||+.+.+.
T Consensus       232 ~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  232 AGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             cCcchhHHHhccchheeeeHh
Confidence                 4799999999988764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.84  E-value=2.1e-08  Score=91.21  Aligned_cols=107  Identities=22%  Similarity=0.300  Sum_probs=85.0

Q ss_pred             eEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh--hHHHH
Q 019844           96 GVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE--TVNRI  169 (335)
Q Consensus        96 g~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g--~L~~~  169 (335)
                      .+.|+|....+|..|++|++..+.    .....=++.++++.|+|||.+.++|.+.. .....+++|++|+++  +|+++
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCchHHHH
Confidence            368999999999999999994322    12335688999999999999999997433 456779999999994  88876


Q ss_pred             HHHHhh-----------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          170 ARNYSR-----------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       170 l~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .-....           .+...+|..+|.|+.||..||.++|+.|
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG  413 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG  413 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            543211           1345789999999999999999999999

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.82  E-value=1.4e-09  Score=106.24  Aligned_cols=109  Identities=21%  Similarity=0.301  Sum_probs=87.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc--------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +|...+.||.+.|=+|.+|++. .| .|+||++-+..        .+-.+|++ ...++|||++.+..+.     .....
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~-----~t~kA   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL-----VTDKA   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH-----HhhHH
Confidence            5888999999999999999984 34 49999985432        22234555 5566999999988876     45555


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|||=+|...+|++-+..    +.-+.+.+-+.|+.||+.||.-+|..|
T Consensus        96 AylvRqyvkhnLyDRlST----RPFL~~iEKkWiaFQLL~al~qcH~~g  140 (1431)
T KOG1240|consen   96 AYLVRQYVKHNLYDRLST----RPFLVLIEKKWIAFQLLKALSQCHKLG  140 (1431)
T ss_pred             HHHHHHHHhhhhhhhhcc----chHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            778999999999988875    555788889999999999999999998

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.80  E-value=1.6e-07  Score=81.40  Aligned_cols=121  Identities=17%  Similarity=0.195  Sum_probs=71.3

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCC----------Cceeeeceeee
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDH----------PNIVALKHCFF  145 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~h----------pnIv~~~~~~~  145 (335)
                      .+..+..||.|+|+.||.+++..||+.+|+|+..-..       +.+++|.-....+.+          -.++.-++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            4788999999999999999999999999999874211       233344332222211          11111112111


Q ss_pred             eC---------CCCCcc---EEEEEeecchhhHHHHHHHHhhhcCC---CCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          146 ST---------TDKEEL---YLNLVLEYVPETVNRIARNYSRIHQR---MPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       146 ~~---------~~~~~~---~~~iv~e~~~g~L~~~l~~~~~~~~~---l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      -.         .+....   +.+++|+-+.+||.+++.........   +....-..+..|++..+++||+.|
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G  165 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG  165 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc
Confidence            10         001111   24789999989998887653322222   112222355699999999999999

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.79  E-value=1.3e-08  Score=100.49  Aligned_cols=115  Identities=23%  Similarity=0.311  Sum_probs=87.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHhCC---CCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQMLD---HPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..+..|.|.+.||+|+||.||+|.+.. |+.||||+-+... -.+--=.+++.+|+   -+.|..+..++.-     .+-
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~-----~~~  768 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVF-----QNA  768 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHcc-----CCc
Confidence            345689999999999999999999976 9999999775432 11222234455555   2456666665532     222


Q ss_pred             EEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      -++|+||.+ |+|.+++..    .+.+++..+..+..|||.-|+.||..+
T Consensus       769 S~lv~ey~~~Gtlld~~N~----~~~m~e~lv~~~~~qml~ive~lH~~~  814 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLINT----NKVMDEYLVMFFSCQMLRIVEHLHAMG  814 (974)
T ss_pred             ceeeeeccccccHHHhhcc----CCCCCchhhhHHHHHHHHHHHHHHhcc
Confidence            569999999 799999984    678999999999999999999999998

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.79  E-value=2.8e-08  Score=78.19  Aligned_cols=100  Identities=16%  Similarity=0.181  Sum_probs=79.0

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEecccc--hhHHHHHHHHHhCCC--CceeeeceeeeeCCCCCccEEEEEeec
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--RYKNRELQIMQMLDH--PNIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--~~~~~Ei~~l~~l~h--pnIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      +.+.||.|.++.||++...  +..+++|.+....  ..+.+|+.+++.+.|  .++++++.++     ......+++|||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~e~   74 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLMEW   74 (155)
T ss_pred             cceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEEEe
Confidence            3578999999999999984  3789999987654  367899999999976  5888888877     333558899999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.| .+..+           +......++.+++.+|.+||...
T Consensus        75 ~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~  106 (155)
T cd05120          75 IEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLP  106 (155)
T ss_pred             cCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCC
Confidence            997 45322           44556778999999999999754

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.75  E-value=4.6e-08  Score=90.38  Aligned_cols=120  Identities=22%  Similarity=0.201  Sum_probs=98.8

Q ss_pred             CCccceeeeEEeeeeec--cCceEEEEEEE--cCCCcEEEEEEe--c----ccchhHHHHHHHHHhC-CCCceeeeceee
Q 019844           76 GNSKQKVSYIAEHVVGT--GSFGVVFQAKC--RETGEIVAIKKV--L----QDKRYKNRELQIMQML-DHPNIVALKHCF  144 (335)
Q Consensus        76 ~~~~~~~~y~~~~~lG~--G~fg~V~~~~~--~~~~~~vAvK~i--~----~~~~~~~~Ei~~l~~l-~hpnIv~~~~~~  144 (335)
                      ........+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-  +    .....-.+|+...+.+ .|+|.++.+..|
T Consensus       108 ~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~  187 (524)
T KOG0601|consen  108 FDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW  187 (524)
T ss_pred             ccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc
Confidence            33445556888899999  99999999998  899999999973  2    2234456888888888 499999999988


Q ss_pred             eeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHH----HHHHHHhCC
Q 019844          145 FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR----ALAYIHNCI  203 (335)
Q Consensus       145 ~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~----aL~yLH~~~  203 (335)
                           .....+|+-+|+|+.+|..+....   ..-+++..++.++.+...    ||.++|+.+
T Consensus       188 -----e~~~~lfiqtE~~~~sl~~~~~~~---~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~  242 (524)
T KOG0601|consen  188 -----EGSGILFIQTELCGESLQSYCHTP---CNFLPDNLLWNSLRDWLSRDVTALSHLHSNN  242 (524)
T ss_pred             -----ccCCcceeeeccccchhHHhhhcc---cccCCchhhhhHHhhhhhcccccccccCCCc
Confidence                 667779999999999888887752   344899999999999999    999999988

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.73  E-value=4.4e-08  Score=80.53  Aligned_cols=101  Identities=18%  Similarity=0.149  Sum_probs=67.1

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccch------h----------------------HHHHHHHHHhCCCCc--
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR------Y----------------------KNRELQIMQMLDHPN--  136 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~------~----------------------~~~Ei~~l~~l~hpn--  136 (335)
                      .+.||+|+||.||+|.+. +++.||||++.....      .                      ...|...+..+.+.+  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            568999999999999986 899999999864321      0                      024555555554332  


Q ss_pred             eeeeceeeeeCCCCCccEEEEEeecchh-hHH-HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          137 IVALKHCFFSTTDKEELYLNLVLEYVPE-TVN-RIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       137 Iv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~-~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                      +.+.+++.     .    .++||||++| ++. ..+....     . ...++.++.+++.++.++|. .+
T Consensus        81 ~~~~~~~~-----~----~~lv~e~~~g~~~~~~~l~~~~-----~-~~~~~~~~~~~~~~l~~lh~~~~  135 (187)
T cd05119          81 VPKPIDLN-----R----HVLVMEFIGGDGIPAPRLKDVR-----L-LEDPEELYDQILELMRKLYREAG  135 (187)
T ss_pred             CCceEecC-----C----CEEEEEEeCCCCccChhhhhhh-----h-cccHHHHHHHHHHHHHHHhhccC
Confidence            33333322     1    5799999997 321 2232211     1 16688999999999999998 76

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.70  E-value=1.2e-08  Score=99.56  Aligned_cols=57  Identities=32%  Similarity=0.378  Sum_probs=42.2

Q ss_pred             cCCChHHHHHHHHhccCCCCCCCC---HHHHhcCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019844          248 KRLPPEAVDLVCRFFQYSPNLRCT---ALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK  304 (335)
Q Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t---~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~  304 (335)
                      ..++++++++|.++|+.+|..|..   +.++.+|+||+.+++...-......+|.+.+++
T Consensus       282 ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqkaefvpql~~ed  341 (1205)
T KOG0606|consen  282 EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQKAEFVPQLESED  341 (1205)
T ss_pred             cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhhccccccccccc
Confidence            457899999999999999999984   678889999999988633222223344444443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.49  E-value=1.1e-06  Score=75.22  Aligned_cols=105  Identities=10%  Similarity=0.096  Sum_probs=74.2

Q ss_pred             eeeee-ccCceEEEEEEEcCCCcEEEEEEeccc-----------------chhHHHHHHHHHhCCCCce--eeeceeeee
Q 019844           87 EHVVG-TGSFGVVFQAKCRETGEIVAIKKVLQD-----------------KRYKNRELQIMQMLDHPNI--VALKHCFFS  146 (335)
Q Consensus        87 ~~~lG-~G~fg~V~~~~~~~~~~~vAvK~i~~~-----------------~~~~~~Ei~~l~~l~hpnI--v~~~~~~~~  146 (335)
                      ...|| .|+.|+||.+...  +..+|||.+...                 ...+.+|+.++..|.|++|  +..+++...
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            34677 8888889988773  778999987421                 1345689999999988775  666665432


Q ss_pred             CCCCCccEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          147 TTDKEELYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .. ......++|||+++|  +|.+++..     ..+++..    +.||+.+|.+||.+|
T Consensus       114 ~~-~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~~----~~~i~~~l~~lH~~G  162 (239)
T PRK01723        114 RH-GLFYRADILIERIEGARDLVALLQE-----APLSEEQ----WQAIGQLIARFHDAG  162 (239)
T ss_pred             ec-CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHHH----HHHHHHHHHHHHHCC
Confidence            11 111123599999995  88888753     3455543    678999999999999

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.41  E-value=1.6e-07  Score=88.70  Aligned_cols=112  Identities=17%  Similarity=0.214  Sum_probs=68.7

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccch--------------------------------------hH--
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--------------------------------------YK--  122 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~--------------------------------------~~--  122 (335)
                      .|.. +.||.|++|.||+|+.+.+|+.||||++.+...                                      .+  
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~  199 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD  199 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence            4665 789999999999999988899999999964310                                      01  


Q ss_pred             ----HHHHHHHHhC----CCCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHH--HHHhhhcCCCCHHHHHHHHHH
Q 019844          123 ----NRELQIMQML----DHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIA--RNYSRIHQRMPLIYVKLYTYQ  191 (335)
Q Consensus       123 ----~~Ei~~l~~l----~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l--~~~~~~~~~l~~~~~~~i~~q  191 (335)
                          .+|+..+.++    .+.+.+.+-.+|.+-.    ..-+|||||++| .+.++-  .........+.+..+..++.|
T Consensus       200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s----t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q  275 (537)
T PRK04750        200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC----SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ  275 (537)
T ss_pred             hhCHHHHHHHHHHHHHHccCCCCeecceeecccC----CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence                1333333333    2334444444443211    124599999998 887642  221111124667778888888


Q ss_pred             HHHHHHHHH
Q 019844          192 ICRALAYIH  200 (335)
Q Consensus       192 i~~aL~yLH  200 (335)
                      ++. -.+.|
T Consensus       276 if~-~GffH  283 (537)
T PRK04750        276 VFR-DGFFH  283 (537)
T ss_pred             HHh-CCeee
Confidence            875 33444

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.38  E-value=1.6e-06  Score=73.12  Aligned_cols=109  Identities=10%  Similarity=0.061  Sum_probs=79.9

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCC--CceeeeceeeeeCCCCCccEEEEEe
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDH--PNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~h--pnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      .+.||.|..+.||++... .|+.+++|.....     ...+.+|+.+++.+.+  .++.+++.+....  ......++||
T Consensus         3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~--~~~~~~~~v~   79 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDP--SVLGTPFYVM   79 (223)
T ss_pred             ceecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCC--CccCCceEEE
Confidence            367899999999999874 3688999987643     3467899999999965  3456666654211  1112467999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||++| ++...+.     ...+++.+...++.+++.+|.+||+..
T Consensus        80 e~i~G~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~  119 (223)
T cd05154          80 ERVDGRVLRDRLL-----RPELSPEERRALARALADTLAALHSVD  119 (223)
T ss_pred             EEeCCEecCCCCC-----CCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            99998 6654432     134788888899999999999999765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.22  E-value=1.6e-07  Score=90.27  Aligned_cols=192  Identities=19%  Similarity=0.207  Sum_probs=129.0

Q ss_pred             eeEEeeeeeccCceEEEEEEEc-CCCcEEEEEEeccc---c---hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCR-ETGEIVAIKKVLQD---K---RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~-~~~~~vAvK~i~~~---~---~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .|.+.+.||+|+|+.|-.+... .+...+|.|.+...   .   .....|..+-+.+. |+|++++++..     ....+
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~-----~~~~~   95 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS-----SSPRS   95 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc-----CCCcc
Confidence            3888899999999999988774 34456777877432   1   33456888888886 99999999998     66777


Q ss_pred             EEEEeecchh-hHHHHH-HHHhhhcC-CCCHHHHHHHHHHHHHHHHHHH-hCC------------cCh-H-HhHhhhcCC
Q 019844          155 LNLVLEYVPE-TVNRIA-RNYSRIHQ-RMPLIYVKLYTYQICRALAYIH-NCI------------VDQ-L-VEIIKVLGT  216 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l-~~~~~~~~-~l~~~~~~~i~~qi~~aL~yLH-~~~------------~~~-~-~~~~~~~g~  216 (335)
                      .+++++|..| ++...+ ..    .. .++...+..++.|+..|+.|+| ..+            .+. . ......+|.
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~----~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~  171 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHP----DSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGL  171 (601)
T ss_pred             cccccCcccccccccccccC----CccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchh
Confidence            8899999886 887777 32    33 6788889999999999999999 554            000 0 000001111


Q ss_pred             CC----------HHHhhhh-CCCCCCCCCCC--------------------------------CCC----------Cccc
Q 019844          217 PT----------REEIKCM-NPNYTEFKFPQ--------------------------------IKP----------HPWH  243 (335)
Q Consensus       217 ~~----------~~~~~~~-~~~~~~~~~~~--------------------------------~~~----------~~~~  243 (335)
                      ..          .....++ .+.|.......                                ...          ..+.
T Consensus       172 At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  251 (601)
T KOG0590|consen  172 ATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFT  251 (601)
T ss_pred             hccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccc
Confidence            00          0001122 22222111000                                000          0011


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      ...+..++....+++.++|..+|..|.+..++-.++|+..
T Consensus       252 ~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  252 QLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            2234678899999999999999999999999999999988

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.16  E-value=6.4e-06  Score=77.53  Aligned_cols=106  Identities=22%  Similarity=0.238  Sum_probs=78.6

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      |.+ ...+-++.+.+-.|..+.++.+|.|...+...    ....+.++-|+.++||||++|++.+     .....+|||+
T Consensus        15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~-----e~~~~~ylvT   88 (690)
T KOG1243|consen   15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTT-----EEEGTLYLVT   88 (690)
T ss_pred             ccc-ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhh-----cccCceEEEe
Confidence            665 44444444433357777889999999886433    3466888999999999999999999     6666799999


Q ss_pred             ecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |-+.. |...+++       ++...+..-++||+.||.|||+.+
T Consensus        89 ErV~P-l~~~lk~-------l~~~~v~~Gl~qIl~AL~FL~~d~  124 (690)
T KOG1243|consen   89 ERVRP-LETVLKE-------LGKEEVCLGLFQILAALSFLNDDC  124 (690)
T ss_pred             ecccc-HHHHHHH-------hHHHHHHHHHHHHHHHHHHHhccC
Confidence            99874 2223443       346678888999999999998655

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.08  E-value=1.6e-05  Score=73.60  Aligned_cols=67  Identities=21%  Similarity=0.371  Sum_probs=56.2

Q ss_pred             HHhCCCCceeeeceeeeeCCCCCccEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          129 MQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       129 l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+.+.|.|+.++++..+..     ..+++|.+||. |+|.+++..   ....++......++++|+.||.|||+.-
T Consensus         1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s~   68 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNSP   68 (484)
T ss_pred             CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcCc
Confidence            4678999999999999654     44889999999 799999986   2455777788899999999999999754

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.97  E-value=1.8e-05  Score=63.64  Aligned_cols=97  Identities=10%  Similarity=0.026  Sum_probs=68.6

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCcee-eeceeeeeCCCCCccEEEEEeecc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIV-ALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv-~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      .+.|+.|.++.||++...  +..|++|......   ....+|+.+++.+.+.+++ +++.+.     ...  -++||||+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~-----~~~--~~lv~e~i   73 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD-----PET--GVLITEFI   73 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe-----CCC--CeEEEEec
Confidence            467899999999999874  7889999876543   3457899999998655543 444433     222  35899999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV  204 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~  204 (335)
                      +| ++...            ......++.+++.+|..||..+.
T Consensus        74 ~G~~l~~~------------~~~~~~~~~~l~~~l~~LH~~~~  104 (170)
T cd05151          74 EGSELLTE------------DFSDPENLEKIAKLLKKLHSSPL  104 (170)
T ss_pred             CCCccccc------------cccCHHHHHHHHHHHHHHhCCCC
Confidence            98 65322            01123457899999999998774

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.89  E-value=7.1e-05  Score=69.75  Aligned_cols=106  Identities=19%  Similarity=0.164  Sum_probs=64.0

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccc-h-------------------------------------------hH
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-R-------------------------------------------YK  122 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~-------------------------------------------~~  122 (335)
                      .+.||.|++|.||+|+. .+|+.||||+..... +                                           .+
T Consensus       122 ~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       122 EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             CcceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            46799999999999997 479999999985421 0                                           11


Q ss_pred             HHHHHHHHhC----CCCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHH-HH
Q 019844          123 NRELQIMQML----DHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICR-AL  196 (335)
Q Consensus       123 ~~Ei~~l~~l----~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~-aL  196 (335)
                      .+|...+.++    .|.+-+.+-.+|....    ..-+|||||++| +|.++.....   ....   ...++.+++. .+
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~---~~~~---~~~ia~~~~~~~l  270 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDE---AGLD---RKALAENLARSFL  270 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHh---cCCC---HHHHHHHHHHHHH
Confidence            2344444444    2333344444442211    114699999998 8877765311   1122   2345555555 36


Q ss_pred             HHHHhCC
Q 019844          197 AYIHNCI  203 (335)
Q Consensus       197 ~yLH~~~  203 (335)
                      ..+|..|
T Consensus       271 ~ql~~~g  277 (437)
T TIGR01982       271 NQVLRDG  277 (437)
T ss_pred             HHHHhCC
Confidence            6778776

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.79  E-value=0.00015  Score=59.59  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=70.5

Q ss_pred             eeeeeccCceEEEEEEEcC------CCcEEEEEEeccc-------------c-------------hh----HHHHHHHHH
Q 019844           87 EHVVGTGSFGVVFQAKCRE------TGEIVAIKKVLQD-------------K-------------RY----KNRELQIMQ  130 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~------~~~~vAvK~i~~~-------------~-------------~~----~~~Ei~~l~  130 (335)
                      ...||.|--+.||.|....      .+..+|||+.+-.             .             +.    ..+|+..|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3568999999999998643      3578999987410             0             01    127999999


Q ss_pred             hCCC--CceeeeceeeeeCCCCCccEEEEEeecchh-hHH-HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH-HhCC
Q 019844          131 MLDH--PNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVN-RIARNYSRIHQRMPLIYVKLYTYQICRALAYI-HNCI  203 (335)
Q Consensus       131 ~l~h--pnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~-~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yL-H~~~  203 (335)
                      ++..  -++...+++.     .    -+|||||++| .+. ..++     ...+++.++..+..|++.+|.+| |..|
T Consensus        82 rl~~~Gv~vP~pi~~~-----~----~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~g  145 (197)
T cd05146          82 RMQKAGIPCPEVVVLK-----K----HVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKECN  145 (197)
T ss_pred             HHHHcCCCCCeEEEec-----C----CEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9843  4555555542     2    4599999986 332 1222     23456667788899999999999 7777

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.78  E-value=5.7e-05  Score=70.30  Aligned_cols=118  Identities=21%  Similarity=0.172  Sum_probs=91.3

Q ss_pred             CccceeeeEEeeeeeccCceEEEEEEEc-CCCcEEEEEEecccc------hhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           77 NSKQKVSYIAEHVVGTGSFGVVFQAKCR-ETGEIVAIKKVLQDK------RYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        77 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      ......+|..+..||.|.|+.|+.+..+ .++..||+|.+.+..      .+-..|+.+...+ .|.+++.++..|.   
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~---  336 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS---  336 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc---
Confidence            3455567999999999999999998866 678899999886432      3345788888888 5999999998884   


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                        .....||-.|||+| ++...+..    ...+.+...+.+..|++.|+.++|++.
T Consensus       337 --~~r~~~ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i~s~~  386 (524)
T KOG0601|consen  337 --QLRQGYIPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVIHSKL  386 (524)
T ss_pred             --ccccccCchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccccchh
Confidence              33336699999985 44333321    345888899999999999999999887

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.71  E-value=3.3e-05  Score=70.78  Aligned_cols=114  Identities=19%  Similarity=0.218  Sum_probs=67.6

Q ss_pred             eEEeeeeeccCceEEEEEEEcCC---CcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeece-------eeeeCCC
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKH-------CFFSTTD  149 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~-------~~~~~~~  149 (335)
                      +.+.+..+.+++|.+...+-...   .+.++-+....+.    ....+++..+....|-+..-+.+       .+.....
T Consensus       246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v  325 (516)
T KOG1033|consen  246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV  325 (516)
T ss_pred             ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence            55556667777776665544322   3334444333221    33446666665555444433333       1111111


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY  198 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~y  198 (335)
                      ....|+||.|++|.- +|.++|.... .....+...++.++.|+..|++|
T Consensus       326 ~~~~~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y  374 (516)
T KOG1033|consen  326 GKKVYLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY  374 (516)
T ss_pred             ccccchhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh
Confidence            234579999999994 9999997422 23456777889999999999998

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.18  E-value=0.0057  Score=49.26  Aligned_cols=109  Identities=15%  Similarity=0.166  Sum_probs=75.3

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEec-c-----------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVL-Q-----------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~-~-----------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+..|-+|+-+.|+.+.+  .|+.+.||.=. +           ..++..+|+.+|.++.--.|.--.=+|.+.   .. 
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~---~~-   84 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT---YG-   84 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec---CC-
Confidence            578899999999999997  48888888542 2           124567899999888544443322233221   11 


Q ss_pred             EEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       -+|+|||++|  ++.+++....  .......-...++..|-..+.-||.++
T Consensus        85 -~~i~ME~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~nd  133 (229)
T KOG3087|consen   85 -GQIYMEFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHDND  133 (229)
T ss_pred             -CeEEEEeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhhCC
Confidence             3489999998  8888887643  222223333688899999999999988

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.14  E-value=0.00056  Score=54.56  Aligned_cols=77  Identities=21%  Similarity=0.337  Sum_probs=57.4

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceee-eceeeeeCCCCCccEEEEEee
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVA-LKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~-~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      -.+.+.||+|.+|.||+|..+  |..+|+|+-+.+  ...+..|+++|..++-.++.. +|.+-     .    .++.||
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg-----~----~~i~me   92 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG-----E----DFIRME   92 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec-----h----hhhhhh
Confidence            345788999999999999985  779999987654  356889999999997766643 33332     2    236699


Q ss_pred             cchh-hHHHHHH
Q 019844          161 YVPE-TVNRIAR  171 (335)
Q Consensus       161 ~~~g-~L~~~l~  171 (335)
                      |+.| .|..+-.
T Consensus        93 ~i~G~~L~~~~~  104 (201)
T COG2112          93 YIDGRPLGKLEI  104 (201)
T ss_pred             hhcCcchhhhhh
Confidence            9999 8766544

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.06  E-value=0.013  Score=49.44  Aligned_cols=102  Identities=17%  Similarity=0.169  Sum_probs=74.6

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCC--ceeeeceeeeeCCCCCccEEEEEeecc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHP--NIVALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hp--nIv~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      ++.|+.|..+.||++....  ..+++|.....  ...+.+|..+++.+...  .+.+++......  ......+++|+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~--~~~~~~~~~~~~i   77 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD--EFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET--EETSEEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccc--cccccceEEEEEe
Confidence            5789999999999999853  58999988654  35677899998888433  344555433211  2333478999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +| .+..          ..+......++.++...|.-||..
T Consensus        78 ~g~~~~~----------~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   78 PGRPLDD----------ELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             SSEEHHH----------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             ccccccc----------cccccccccccccchhhhhhcccc
Confidence            98 6654          366777888999999999999987

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.04  E-value=0.00074  Score=67.14  Aligned_cols=114  Identities=16%  Similarity=0.086  Sum_probs=84.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc-------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      -.+.+.+.+-+-+|++|.++.+.-..+|...++|+..+       +.+...++-.++-.-.+|.++.....+     ...
T Consensus       802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~-----~~r  876 (1205)
T KOG0606|consen  802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSF-----PCR  876 (1205)
T ss_pred             CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCC-----CCC
Confidence            44568888899999999999999888887777775532       122333444444444567777765554     333


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      ...+++|+|+.| +|...+..    -+..++.-++.+...+..+++|||..
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~----~~~~saepaRs~i~~~vqs~e~L~s~  923 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHN----SGCLSAEPARSPILERVQSLESLHSS  923 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhc----CCCcccccccchhHHHHhhhhccccc
Confidence            348899999986 99888886    45678888899999999999999987

>PLN02876 acyl-CoA dehydrogenase

Probab=97.00  E-value=0.0042  Score=62.89  Aligned_cols=109  Identities=14%  Similarity=0.118  Sum_probs=75.1

Q ss_pred             eeeeeccCceEEEEEEEcCCC--cEEEEEEecc-----cchhHHHHHHHHHhCC-CCce--eeeceeeeeCCCCCccEEE
Q 019844           87 EHVVGTGSFGVVFQAKCRETG--EIVAIKKVLQ-----DKRYKNRELQIMQMLD-HPNI--VALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~--~~vAvK~i~~-----~~~~~~~Ei~~l~~l~-hpnI--v~~~~~~~~~~~~~~~~~~  156 (335)
                      .+.|+.|.++.+|+......+  ..+++|+.+.     ....+.+|+.+|+.+. |++|  .+++.++.+.  ......|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~--~v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDA--SVIGTAF  120 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCC--CcCCCce
Confidence            577899999999998764332  4678887643     2245789999999995 6665  5666555221  1123467


Q ss_pred             EEeecchhh-HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPET-VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~-L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++|. +.+.      .-..++..+...++.+++.+|..||...
T Consensus       121 lVME~v~G~~~~~~------~~~~~~~~~r~~l~~~l~~~La~LH~vd  162 (822)
T PLN02876        121 YIMEYLEGRIFVDP------KLPGVAPERRRAIYRATAKVLAALHSAD  162 (822)
T ss_pred             EEEEecCCcccCCc------cCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999993 3210      0123567778889999999999999865

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.85  E-value=0.0027  Score=64.07  Aligned_cols=76  Identities=16%  Similarity=0.275  Sum_probs=58.7

Q ss_pred             HHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          123 NRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       123 ~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      ..|+..+..+.|+|++.++.|-....... --+.+..++|.+ ++..++..    .+..+...++.+..+++.||.|+|+
T Consensus       230 E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~----v~~i~~~~~r~~~~~~~~GL~~~h~  304 (1351)
T KOG1035|consen  230 EIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQS----VGSIPLETLRILHQKLLEGLAYLHS  304 (1351)
T ss_pred             HHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhh----ccccCHHHHHHHHHHHhhhHHHHHH
Confidence            35677788889999999988875433221 123355677886 88888876    6779999999999999999999998


Q ss_pred             CC
Q 019844          202 CI  203 (335)
Q Consensus       202 ~~  203 (335)
                      ..
T Consensus       305 ~~  306 (1351)
T KOG1035|consen  305 LS  306 (1351)
T ss_pred             hc
Confidence            86

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=96.84  E-value=0.00094  Score=65.99  Aligned_cols=41  Identities=22%  Similarity=0.290  Sum_probs=36.4

Q ss_pred             CCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          249 RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       249 ~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      .++..+.+++.+||..||.+||++.++|+||||....+...
T Consensus       605 ~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~~~~~~  645 (669)
T cd05610         605 KLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDWENL  645 (669)
T ss_pred             cCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCCCHHHh
Confidence            56888999999999999999999999999999988765433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.46  E-value=0.0036  Score=59.24  Aligned_cols=109  Identities=18%  Similarity=0.264  Sum_probs=66.9

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccch--------------------------------------------hH
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR--------------------------------------------YK  122 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~--------------------------------------------~~  122 (335)
                      .+.|+.++-|.||+|+.+ +|+.||||+...+.+                                            .+
T Consensus       130 ~~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy  208 (517)
T COG0661         130 PEPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY  208 (517)
T ss_pred             CCchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence            367999999999999985 599999999864210                                            01


Q ss_pred             HHHHHHHHhC----CCCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHH--HHHHhhhcCCCCHHHHHHHHHHHHHH
Q 019844          123 NRELQIMQML----DHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRI--ARNYSRIHQRMPLIYVKLYTYQICRA  195 (335)
Q Consensus       123 ~~Ei~~l~~l----~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~--l~~~~~~~~~l~~~~~~~i~~qi~~a  195 (335)
                      .+|..-+.++    .+..=+.+-.+|+.....    -.|+|||++| -+.++  ++..+.....+.+.-+..++.|++. 
T Consensus       209 ~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~----~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~-  283 (517)
T COG0661         209 RREAANAERFRENFKDDPDVYVPKVYWEYTTR----RVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR-  283 (517)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEeceeehhccCC----cEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh-
Confidence            2455555444    223333444444321111    3499999999 77776  3432222223555566677777777 


Q ss_pred             HHHHHh
Q 019844          196 LAYIHN  201 (335)
Q Consensus       196 L~yLH~  201 (335)
                      -.|.|.
T Consensus       284 dgffHa  289 (517)
T COG0661         284 DGFFHA  289 (517)
T ss_pred             cCcccc
Confidence            667773

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=96.43  E-value=0.11  Score=45.10  Aligned_cols=79  Identities=9%  Similarity=0.077  Sum_probs=53.6

Q ss_pred             hHHHHHHHHHhCCC-----CceeeeceeeeeCCCCCccEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHH
Q 019844          121 YKNRELQIMQMLDH-----PNIVALKHCFFSTTDKEELYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQIC  193 (335)
Q Consensus       121 ~~~~Ei~~l~~l~h-----pnIv~~~~~~~~~~~~~~~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  193 (335)
                      .+.+|...+..|..     |.+|-+   ...........-+||||+++|  +|.+++....  ....++.....++.+++
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~---~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la  148 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAF---GERGSNPATRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVA  148 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEE---EEecCCCccceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHH
Confidence            36789888877733     433433   321111112235699999997  7988886432  23456777889999999


Q ss_pred             HHHHHHHhCCc
Q 019844          194 RALAYIHNCIV  204 (335)
Q Consensus       194 ~aL~yLH~~~~  204 (335)
                      ..+.-||.+|+
T Consensus       149 ~~i~~LH~~Gi  159 (268)
T PRK15123        149 TMVRDMHAAGI  159 (268)
T ss_pred             HHHHHHHHCcC
Confidence            99999999993

>PRK10593 hypothetical protein; Provisional

Probab=96.37  E-value=0.035  Score=49.12  Aligned_cols=106  Identities=11%  Similarity=-0.008  Sum_probs=71.7

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEecc--cchhHHHHHHHHHhCCC---CceeeeceeeeeCCCCCccEEEEEe
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ--DKRYKNRELQIMQMLDH---PNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~--~~~~~~~Ei~~l~~l~h---pnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      .-.+.||.|..+.||..... .+ .+.+|..+.  ....+..|...|+.|..   -.|.++++++...  .....-+|||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~--~~~g~~~LVm   92 (297)
T PRK10593         17 SRVECISEQPYAALWALYDS-QG-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE--QSPGPDVLLL   92 (297)
T ss_pred             heeeecCCccceeEEEEEcC-CC-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC--CcCCCeEEEE
Confidence            34678999999999999752 33 467777543  23578899999998843   3566777665221  1123367999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+++| ++.+.         ..+......+..+++.+|.-||...
T Consensus        93 E~i~G~~~~~~---------~~~~~~~~~l~~~l~~~La~LH~~~  128 (297)
T PRK10593         93 ERLRGVSVEAP---------ARTPERWEQLKDQIVEGLLAWHRID  128 (297)
T ss_pred             eccCCEecCCC---------CCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            99998 55431         1233445567788899999999753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.35  E-value=0.031  Score=45.21  Aligned_cols=96  Identities=11%  Similarity=0.199  Sum_probs=65.1

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEE-eccc-----------chhHHHHHHHHHhCCCCc--eeeeceeeeeCCCCCcc
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKK-VLQD-----------KRYKNRELQIMQMLDHPN--IVALKHCFFSTTDKEEL  153 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~-i~~~-----------~~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~~~~~~~  153 (335)
                      ..+++|+-+.+|.+.+.  |..+.+|. ++|.           ..+..+|..++..+.--.  +..+|++.     .+. 
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD-----~~~-   73 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD-----PDN-   73 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCC-
Confidence            46789999999999764  55566664 3331           134568999999885433  34444443     222 


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ..|+|||++| .|.+++...           ...++..+-.-+.-||..|
T Consensus        74 -~~I~me~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~g  112 (204)
T COG3642          74 -GLIVMEYIEGELLKDALEEA-----------RPDLLREVGRLVGKLHKAG  112 (204)
T ss_pred             -CEEEEEEeCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcC
Confidence             4499999999 777777752           1445667777788899998

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=96.29  E-value=0.026  Score=47.82  Aligned_cols=99  Identities=13%  Similarity=0.056  Sum_probs=66.9

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCc--eeeeceeeeeCCCCCccEEEEEeecch
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPN--IVALKHCFFSTTDKEELYLNLVLEYVP  163 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~~~~~~~~~~iv~e~~~  163 (335)
                      ..||.|..+.||++    .+..+++|.....  ...+.+|.++++.+..-+  +.+.+++.     .......+|||+++
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeeeeecC
Confidence            57899999999984    2556788987542  245789999998885332  34555554     23333678999999


Q ss_pred             h-h-HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          164 E-T-VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       164 g-~-L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      | + +...+.        .+......++.+++..+.-||+..
T Consensus        78 G~~~~~~~~~--------~~~~~~~~l~~~la~~l~~lH~~~  111 (226)
T TIGR02172        78 GKRSFSRIIS--------DNPSRLEEIAKIFAEMAKKLHSTK  111 (226)
T ss_pred             Cccchhhhhc--------CCHHHHHHHHHHHHHHHHHHhCCC
Confidence            9 3 322221        334455577888999999999754

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK09902 hypothetical protein; Provisional

Probab=95.89  E-value=0.21  Score=41.52  Aligned_cols=111  Identities=11%  Similarity=0.040  Sum_probs=72.3

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEec----------ccchhHHHHHHHHHhCCCCc--eeeeceeeeeCCCCCccEEEE
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQMLDHPN--IVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~----------~~~~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~~~~~~~~~~i  157 (335)
                      -|+||-+-|+.....  |+.|=+|.-.          .....+.+|+..+..|..-+  +.+.. ++-.........-+|
T Consensus        26 ~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L  102 (216)
T PRK09902         26 YRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL  102 (216)
T ss_pred             cCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence            356777778877653  4456677653          12345779999999884322  33333 221111122333679


Q ss_pred             Eeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC
Q 019844          158 VLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD  205 (335)
Q Consensus       158 v~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~  205 (335)
                      |+|-++|  +|.+++....  -.+.++..-..++.+++..+.-||..|+.
T Consensus       103 VTe~L~g~~~L~~~l~~~~--~~~~~~~~k~~il~~va~~ia~LH~~Gv~  150 (216)
T PRK09902        103 VTEDMAGFISIADWYAQHA--VSPYSDEVRQAMLKAVALAFKKMHSVNRQ  150 (216)
T ss_pred             EEEeCCCCccHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHHHCCCc
Confidence            9999986  9998886522  23456777789999999999999999943

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.85  E-value=0.067  Score=44.11  Aligned_cols=104  Identities=22%  Similarity=0.250  Sum_probs=70.9

Q ss_pred             eeeEEeeeeeccCc-eEEEEEEEcCCCcEEEEEEecc-----------c----c----------hhHHHHHHHHHhC---
Q 019844           82 VSYIAEHVVGTGSF-GVVFQAKCRETGEIVAIKKVLQ-----------D----K----------RYKNRELQIMQML---  132 (335)
Q Consensus        82 ~~y~~~~~lG~G~f-g~V~~~~~~~~~~~vAvK~i~~-----------~----~----------~~~~~Ei~~l~~l---  132 (335)
                      .+++.++.||.|.- |.||+++.  .|+.||+|.+..           .    .          .-+..|.+...+|   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            46999999999999 99999997  588999999421           0    0          1234677766555   


Q ss_pred             CCCce--eeeceeeeeCCC-------------CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHH
Q 019844          133 DHPNI--VALKHCFFSTTD-------------KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA  197 (335)
Q Consensus       133 ~hpnI--v~~~~~~~~~~~-------------~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  197 (335)
                      ++.++  |++++|.....+             .......||.||++..-            .+....    +.+|++-|.
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~~----~~~~~~dl~  178 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIRD----IPQMLRDLK  178 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchhH----HHHHHHHHH
Confidence            55677  999999865421             11223468888877521            122222    567778888


Q ss_pred             HHHhCC
Q 019844          198 YIHNCI  203 (335)
Q Consensus       198 yLH~~~  203 (335)
                      .+|..|
T Consensus       179 ~~~k~g  184 (207)
T PF13095_consen  179 ILHKLG  184 (207)
T ss_pred             HHHHCC
Confidence            899888

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.78  E-value=0.031  Score=45.73  Aligned_cols=91  Identities=18%  Similarity=0.197  Sum_probs=56.6

Q ss_pred             EEEEEEEcCCCcEEEEEEecccc------------------------------hhHHHHHHHHHhCCCC--ceeeeceee
Q 019844           97 VVFQAKCRETGEIVAIKKVLQDK------------------------------RYKNRELQIMQMLDHP--NIVALKHCF  144 (335)
Q Consensus        97 ~V~~~~~~~~~~~vAvK~i~~~~------------------------------~~~~~Ei~~l~~l~hp--nIv~~~~~~  144 (335)
                      .||.|.. ..|..+|||+.+...                              ....+|...|..+..-  ++.+.+++.
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            3899987 578899999874210                              1235899999999765  456666543


Q ss_pred             eeCCCCCccEEEEEeecch--h-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH-HHhCC
Q 019844          145 FSTTDKEELYLNLVLEYVP--E-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY-IHNCI  203 (335)
Q Consensus       145 ~~~~~~~~~~~~iv~e~~~--g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~y-LH~~~  203 (335)
                           .    -+|||||++  | .+..+...      .++......++.+++..+.. +|..|
T Consensus        80 -----~----~~ivME~I~~~G~~~~~l~~~------~~~~~~~~~~~~~il~~~~~~~~~~g  127 (188)
T PF01163_consen   80 -----R----NVIVMEYIGEDGVPLPRLKDV------DLSPEEPKELLEEILEEIIKMLHKAG  127 (188)
T ss_dssp             -----T----TEEEEE--EETTEEGGCHHHC------GGGGSTHHHHHHHHHHHHHHHHHCTT
T ss_pred             -----C----CEEEEEecCCCccchhhHHhc------cccchhHHHHHHHHHHHHHHHHHhcC
Confidence                 2    249999999  7 55443332      12244567788888886665 46777

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=95.58  E-value=0.0021  Score=59.26  Aligned_cols=72  Identities=24%  Similarity=0.474  Sum_probs=59.6

Q ss_pred             CccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           77 NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        77 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ..+..+.|..+..+|.|+||+|+.+..+.++-.+|||.|...     .....+|+.-+..+.|++|+++...|....
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~  120 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYERP  120 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecCC
Confidence            345566799999999999999999999888889999998532     244668888999999999999999886543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.51  E-value=0.0011  Score=62.77  Aligned_cols=125  Identities=11%  Similarity=0.018  Sum_probs=86.3

Q ss_pred             EeeccCCCCCccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCc-eeeeceeeee
Q 019844           68 RTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPN-IVALKHCFFS  146 (335)
Q Consensus        68 ~~~~~~~~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpn-Iv~~~~~~~~  146 (335)
                      ..+.............|....-+++|+++++++.+...+.... .+.+... ....-++++|.+++||| .+.+++-+  
T Consensus       228 TkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-l~~rl~~eLLdK~n~P~~~v~~~~d~--  303 (829)
T KOG0576|consen  228 TKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-LSRRLAIELLDKVNNPNPVVRYLEDY--  303 (829)
T ss_pred             hccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-hhhHHHHHHHHHccCCCCcccccccC--
Confidence            3344444444445556777888999999999999986655544 6666543 34456899999999999 66666655  


Q ss_pred             CCCCCccEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          147 TTDKEELYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                         +.+.+.+|+|+++.+  +....+..   ....+.+-+...+.+.-+++|+|||+.
T Consensus       304 ---~~E~~~~i~~~i~s~~rs~~~~~~~---se~~~~~~~~~~~~r~et~~l~~l~~~  355 (829)
T KOG0576|consen  304 ---DGEDYLWIPMRICSTGRSSALEMTV---SEIALEQYQFAYPLRKETRPLAELHSS  355 (829)
T ss_pred             ---CcccccchhhhhhcCCccccccCCh---hhHhhhhhhhhhhhhhhcccccccccc
Confidence               778889999999984  22211111   123355556667778888999999987

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.04  E-value=0.12  Score=44.36  Aligned_cols=101  Identities=18%  Similarity=0.125  Sum_probs=65.4

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc----------c----------------chhHHHHHHHHHhCCCC--
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ----------D----------------KRYKNRELQIMQMLDHP--  135 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----------~----------------~~~~~~Ei~~l~~l~hp--  135 (335)
                      +.++..||-|--+.||.|.+ ..|..+|||.=+.          .                ...+++|.++|..|...  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            55789999999999999998 4789999994320          0                02346899999999644  


Q ss_pred             ceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          136 NIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       136 nIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|.+.+++-         .-.+||||++| -|..+         +++...+..++..|++-+.-+-..|
T Consensus       172 ~VP~P~~~n---------RHaVvMe~ieG~eL~~~---------r~~~en~~~il~~il~~~~~~~~~G  222 (304)
T COG0478         172 KVPKPIAWN---------RHAVVMEYIEGVELYRL---------RLDVENPDEILDKILEEVRKAYRRG  222 (304)
T ss_pred             CCCCccccc---------cceeeeehcccceeecc---------cCcccCHHHHHHHHHHHHHHHHHcC
Confidence            566554432         24599999998 54322         1234445555555555444333333

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=94.91  E-value=0.12  Score=44.12  Aligned_cols=98  Identities=13%  Similarity=0.078  Sum_probs=63.6

Q ss_pred             eeeccCc-eEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEEEeecchh-
Q 019844           89 VVGTGSF-GVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNLVLEYVPE-  164 (335)
Q Consensus        89 ~lG~G~f-g~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-  164 (335)
                      .|-.|.. ..||++...  +..+.+|+.... .....+|+++++.+. +--+.+++++.     .....-++|||+++| 
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~~~~~~lv~e~i~G~   77 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYG-----SDDGRAWLLTSAVPGV   77 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEE-----ecCCccEEEEEeeCCc
Confidence            3455555 679999753  467888876532 235678999998884 43355666655     222336699999999 


Q ss_pred             hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          165 TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       165 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|.....          ......++.++...|.-||+..
T Consensus        78 ~l~~~~~----------~~~~~~~~~~l~~~l~~lH~i~  106 (244)
T cd05150          78 PAAALWE----------ELEPERLVDALAEALRRLHALP  106 (244)
T ss_pred             cHhHhhc----------ccCHHHHHHHHHHHHHHHhcCC
Confidence            6643221          1122457888999999999764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=94.83  E-value=0.52  Score=43.41  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecc-----------cchhHHHHHHHHHhCC---CCceeeeceeeeeCCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----------DKRYKNRELQIMQMLD---HPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----------~~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+.||.|.++.||++.+...++.+.||.-..           ...+...|.+.|+.+.   -.++.+++.+-     .. 
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D-----~~-  104 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD-----EE-  104 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC-----CC-
Confidence            4679999999999999854336899997431           2244567888888872   24566776653     21 


Q ss_pred             cEEEEEeecchh--hHHHHHH
Q 019844          153 LYLNLVLEYVPE--TVNRIAR  171 (335)
Q Consensus       153 ~~~~iv~e~~~g--~L~~~l~  171 (335)
                       ..++|||++++  .+.+.+.
T Consensus       105 -~~~lVME~L~~~~~lr~~Ll  124 (401)
T PRK09550        105 -LAVTVMEDLSDHKILRKGLI  124 (401)
T ss_pred             -CCEEEEecCCCccHHHHHHh
Confidence             14599999996  4555544

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=94.44  E-value=0.36  Score=40.83  Aligned_cols=96  Identities=20%  Similarity=0.270  Sum_probs=61.4

Q ss_pred             eeeeeccCceEEEEEEEcC-CCcEEEEEEecccch---hHHHHHHHHHhCCCCc-eeeeceeeeeCCCCCccEEEEEeec
Q 019844           87 EHVVGTGSFGVVFQAKCRE-TGEIVAIKKVLQDKR---YKNRELQIMQMLDHPN-IVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~~---~~~~Ei~~l~~l~hpn-Iv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      .+.|..|-...||++.... .++.|++|+......   ...+|+.+++.+...+ +.+++..+     ..    .+||||
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~-----~~----~~l~e~   73 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATF-----QN----GLIYEF   73 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEe-----CC----cEEEEe
Confidence            4667888888999997643 356888997654322   2247999999885333 34444433     21    279999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++| ++....         +.   -..++.+++..|.-||...
T Consensus        74 i~G~~l~~~~---------~~---~~~~~~~la~~l~~lH~~~  104 (235)
T cd05157          74 IPGRTLEPED---------LR---NPKIYRLIARELAKLHSIK  104 (235)
T ss_pred             eCCCcCCHHH---------cc---ChHHHHHHHHHHHHHhccc
Confidence            998 442110         10   1235778899999999766

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=94.18  E-value=0.81  Score=38.04  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=53.9

Q ss_pred             hhHHHHHHHHHhCCCCc--eeeeceeeeeCCCCCccEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHH
Q 019844          120 RYKNRELQIMQMLDHPN--IVALKHCFFSTTDKEELYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRA  195 (335)
Q Consensus       120 ~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~~~~~~~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a  195 (335)
                      ....+|...+..|..-+  +...+.+....... ....++|||+++|  +|.+++..    ...++......++.++...
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~-~~~s~lite~l~~~~~L~~~~~~----~~~~~~~~~~~ll~~l~~~  130 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGG-GYRSYLITEALPGAQDLRDLLQQ----WEQLDPSQRRELLRALARL  130 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC-ceeEEEEEEeCCCcccHHHHHHh----hcccchhhHHHHHHHHHHH
Confidence            35668888877774322  22333333221111 1345799999997  79888886    2336777788999999999


Q ss_pred             HHHHHhCCc
Q 019844          196 LAYIHNCIV  204 (335)
Q Consensus       196 L~yLH~~~~  204 (335)
                      +.-||.+|+
T Consensus       131 i~~lH~~gi  139 (206)
T PF06293_consen  131 IAKLHDAGI  139 (206)
T ss_pred             HHHHHHCcC
Confidence            999999993

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=93.53  E-value=0.19  Score=47.76  Aligned_cols=30  Identities=30%  Similarity=0.393  Sum_probs=26.3

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ  117 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~  117 (335)
                      .+.||.-+.|.||+|+.+. |+.||||+-.+
T Consensus       166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P  195 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHP  195 (538)
T ss_pred             cchhhhcchhheEEEEecC-CCEEEEEecCc
Confidence            4789999999999999965 99999998753

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.39  E-value=0.52  Score=40.16  Aligned_cols=99  Identities=13%  Similarity=0.126  Sum_probs=62.2

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEecccc----------------------------hhHHHHHHHHHhCC--CCce
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------------------------RYKNRELQIMQMLD--HPNI  137 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------------------------~~~~~Ei~~l~~l~--hpnI  137 (335)
                      ..|..|--+.||+|.. .++..+|+|+.....                            ....+|+.-|+++.  +=.+
T Consensus        54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            3666777778999986 578899999885221                            01236777777773  3444


Q ss_pred             eeeceeeeeCCCCCccEEEEEeecchhh--HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          138 VALKHCFFSTTDKEELYLNLVLEYVPET--VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       138 v~~~~~~~~~~~~~~~~~~iv~e~~~g~--L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      .+-+.++     .    -.|||||++..  -.-.|+     .-.+...++..+..+++..+.-|-.
T Consensus       133 P~Pi~~~-----~----nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~~~~~l~~  184 (268)
T COG1718         133 PEPIAFR-----N----NVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVEYMRRLYK  184 (268)
T ss_pred             CCceeec-----C----CeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHHHHHHHHH
Confidence            5555554     2    34999999843  111122     1223344677888888888876655

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=92.83  E-value=0.96  Score=37.38  Aligned_cols=100  Identities=18%  Similarity=0.223  Sum_probs=65.6

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccc--------------------hhHHHHHHHHHhCC------CCceeee
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK--------------------RYKNRELQIMQMLD------HPNIVAL  140 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~--------------------~~~~~Ei~~l~~l~------hpnIv~~  140 (335)
                      ...||+|+.=.||.--   .....+||++....                    +...+|+.....+.      +.+|.++
T Consensus         6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            4578999988888753   45567889886544                    44567887766665      7899999


Q ss_pred             ceeeeeCCCCCccEEEEEeecch---h----hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 KHCFFSTTDKEELYLNLVLEYVP---E----TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ~~~~~~~~~~~~~~~~iv~e~~~---g----~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||+..+.     .-+-+|+|.+.   |    +|.+++.     .+.+++ .+...+.++.   +||-.++
T Consensus        83 ~G~veT~-----~G~Glv~e~I~d~dG~~s~TL~~~l~-----~~~~~~-~~~~~L~~f~---~~l~~~~  138 (199)
T PF10707_consen   83 YGFVETN-----LGLGLVVELIRDADGNISPTLEDYLK-----EGGLTE-ELRQALDEFK---RYLLDHH  138 (199)
T ss_pred             eEEEecC-----CceEEEEEEEECCCCCcCccHHHHHH-----cCCccH-HHHHHHHHHH---HHHHHcC
Confidence            9998443     33678888863   2    6777775     345666 4444444443   3444444

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.65  E-value=0.045  Score=41.22  Aligned_cols=44  Identities=23%  Similarity=0.300  Sum_probs=34.1

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHh
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQM  131 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~  131 (335)
                      ...||.|+.|.||+|+.+ +|+.||||+..... ..+...+.+|+.
T Consensus        16 ~~PlasASiaQVh~a~l~-~g~~VaVKV~rP~i~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLK-DGEEVAVKVQRPGIEEQIEADLRILRR   60 (119)
T ss_pred             cchhhheehhhheeeeec-ccchhhhhhcchHHHHHHHHHHHHHHH
Confidence            467999999999999985 49999999987654 345556666654

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=92.34  E-value=2.3  Score=35.76  Aligned_cols=108  Identities=14%  Similarity=0.160  Sum_probs=61.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccch-------------hHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR-------------YKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-------------~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      .+|.+.+++-.....-|.+..-  .|+.+.+|..+...+             ...+.+..+..+...++..+-+.++...
T Consensus        31 ~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e  108 (229)
T PF06176_consen   31 NNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE  108 (229)
T ss_pred             CCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence            3578888888777766666654  578899997753321             1224444444443322222222111111


Q ss_pred             C---CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 D---KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~---~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .   .-....+++|||++| .|.++..        +++    .+...|..++.-||..|
T Consensus       109 kk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~G  155 (229)
T PF06176_consen  109 KKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKHG  155 (229)
T ss_pred             eeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHcC
Confidence            1   122335689999999 6654432        333    24456777889999988

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=90.96  E-value=0.93  Score=38.45  Aligned_cols=98  Identities=10%  Similarity=0.045  Sum_probs=58.7

Q ss_pred             eeeeccCce-EEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCC---ceeeeceeeeeCCCCCccEEEEEeec
Q 019844           88 HVVGTGSFG-VVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHP---NIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        88 ~~lG~G~fg-~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hp---nIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      +.|+.|+.. .||++.     ..+++|.....  ...+.+|..++..|...   -+..+++..  .........|++|++
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~--~~~~~~~~~~~l~~~   75 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKG--EPGEGYPWPWSVYRW   75 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecC--CCccCCCcceEEEEe
Confidence            457767666 488762     35777865542  23578899999888532   223333222  010112235789999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++| ++....         +.  ....++.++...|.-||+..
T Consensus        76 i~G~~l~~~~---------~~--~~~~l~~~la~~l~~LH~i~  107 (235)
T cd05155          76 LEGETATAAA---------LS--DPSEFAEDLADFLAALRQID  107 (235)
T ss_pred             ecCCCCCccc---------cC--CHHHHHHHHHHHHHHHhCCC
Confidence            998 664321         11  12367788889899999765

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=90.56  E-value=3  Score=37.88  Aligned_cols=76  Identities=18%  Similarity=0.208  Sum_probs=50.5

Q ss_pred             eeeccCceEEEEEEEcCCCcEEEEEEecc-----------cchhHHHHHHHHHhCC--CC-ceeeeceeeeeCCCCCccE
Q 019844           89 VVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----------DKRYKNRELQIMQMLD--HP-NIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        89 ~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----------~~~~~~~Ei~~l~~l~--hp-nIv~~~~~~~~~~~~~~~~  154 (335)
                      .||.|...-||++.+...++.++||.-..           ...+...|...|+...  -| .+.++|.+      .... 
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~------D~e~-   74 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF------DTEM-   74 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE------cccc-
Confidence            57999999999999854446899996421           1245567888887773  24 45555543      2222 


Q ss_pred             EEEEeecchh--hHHHHHH
Q 019844          155 LNLVLEYVPE--TVNRIAR  171 (335)
Q Consensus       155 ~~iv~e~~~g--~L~~~l~  171 (335)
                      ..+|||+++.  .|.+.|-
T Consensus        75 ~~~vMEdL~~~~ilR~~Li   93 (370)
T TIGR01767        75 AVTVMEDLSHHKIARKGLI   93 (370)
T ss_pred             ceehHhhCccchHHHHHHH
Confidence            3499999984  6655554

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=89.65  E-value=1.4  Score=40.01  Aligned_cols=104  Identities=17%  Similarity=0.205  Sum_probs=63.6

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cc------------------------hhHHHHHHHHHhCCC
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DK------------------------RYKNRELQIMQMLDH  134 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~------------------------~~~~~Ei~~l~~l~h  134 (335)
                      .+-..|..|--+.||.|.. .+|..+|||+.+-      +.                        .....|++-|++|+.
T Consensus       147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            3456677888889999987 6888899998752      11                        012367888888866


Q ss_pred             CceeeeceeeeeCCCCCccEEEEEeecchhh-H-HHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          135 PNIVALKHCFFSTTDKEELYLNLVLEYVPET-V-NRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       135 pnIv~~~~~~~~~~~~~~~~~~iv~e~~~g~-L-~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      ..|.-- .-..     -.. -.|||+|++++ . .-.|+     .-.++...+..+-.|++.-|.-|..
T Consensus       226 aGIP~P-ePIl-----Lk~-hVLVM~FlGrdgw~aPkLK-----d~~ls~~ka~~~Y~~~v~~MR~lY~  282 (520)
T KOG2270|consen  226 AGIPCP-EPIL-----LKN-HVLVMEFLGRDGWAAPKLK-----DASLSTSKARELYQQCVRIMRRLYQ  282 (520)
T ss_pred             cCCCCC-Ccee-----eec-ceEeeeeccCCCCcCcccc-----cccCChHHHHHHHHHHHHHHHHHHH
Confidence            553321 1111     112 24999999842 1 11222     3447777777777777776665543

>PLN02756 S-methyl-5-thioribose kinase

Probab=88.74  E-value=5.6  Score=36.82  Aligned_cols=98  Identities=12%  Similarity=0.126  Sum_probs=62.0

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecc-----------cchhHHHHHHHHHhCC---CCceeeeceeeeeCCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----------DKRYKNRELQIMQMLD---HPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----------~~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+.||.|....||+..+.  +..++||.-..           ...+...|...|+.+.   ..+|.++|.+.     .+.
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~d-----ed~  109 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFD-----RTM  109 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEEC-----CCC
Confidence            678899999999999873  45688997541           2334456777777663   24677777766     322


Q ss_pred             cEEEEEeecchhh---HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Q 019844          153 LYLNLVLEYVPET---VNRIARNYSRIHQRMPLIYVKLYTYQICRALAY  198 (335)
Q Consensus       153 ~~~~iv~e~~~g~---L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~y  198 (335)
                        -+++||++++.   +.+-+-     .+......+..+...++..|-|
T Consensus       110 --~vlvME~L~~~~~ilr~~Ll-----~G~~~p~~a~~ig~~la~tLf~  151 (418)
T PLN02756        110 --ALIGMRYLEPPHIILRKGLI-----AGIEYPLLAEHMSDYMAKTLFF  151 (418)
T ss_pred             --CEEEEeecCCcceehhhhhc-----cCCCCHHHHHHHHHHHHHHHhh
Confidence              44899999863   333332     2223345566666666666544

>PRK12396 5-methylribose kinase; Reviewed

Probab=88.58  E-value=2.8  Score=38.61  Aligned_cols=78  Identities=14%  Similarity=0.158  Sum_probs=53.0

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEec----------ccchhHHHHHHHHHhCC--CC-ceeeeceeeeeCCCCCcc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVL----------QDKRYKNRELQIMQMLD--HP-NIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~----------~~~~~~~~Ei~~l~~l~--hp-nIv~~~~~~~~~~~~~~~  153 (335)
                      .+.||-|.-.-||++.+...++.++||.-.          ....+...|..+|+.+.  -| .+.++|.+      ....
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~------D~e~  107 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF------DSVM  107 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE------CcHH
Confidence            678999999999999984446779999642          12355677888888773  34 45555553      2233


Q ss_pred             EEEEEeecchh--hHHHHHH
Q 019844          154 YLNLVLEYVPE--TVNRIAR  171 (335)
Q Consensus       154 ~~~iv~e~~~g--~L~~~l~  171 (335)
                       ..+|||+++.  .|.+.|-
T Consensus       108 -~~~vMEdL~~~~ilR~~Li  126 (409)
T PRK12396        108 -NCCVMEDLSDHTILRTALI  126 (409)
T ss_pred             -hhHHHHhCcccHHHHHHHH
Confidence             3499999974  5555554

>TIGR02721 ycfN_thiK thiamine kinase

Probab=86.41  E-value=2.4  Score=36.38  Aligned_cols=91  Identities=13%  Similarity=0.107  Sum_probs=57.0

Q ss_pred             eeccCceEEEEEEEcCCCcEEEEEEecccch----hHHHHHHHHHhCCCCce-eeeceeeeeCCCCCccEEEEEeecchh
Q 019844           90 VGTGSFGVVFQAKCRETGEIVAIKKVLQDKR----YKNRELQIMQMLDHPNI-VALKHCFFSTTDKEELYLNLVLEYVPE  164 (335)
Q Consensus        90 lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~----~~~~Ei~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~iv~e~~~g  164 (335)
                      +..|-.+.+|+..  .+++.+++|.......    ...+|..+++.+...++ .+++...     .    -++||||++|
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-----~----~~~v~e~i~G   72 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-----E----HWLLVEWLEG   72 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-----C----CEEEEEeccC
Confidence            4567777899887  3567888887654322    24679999999854333 2333322     2    1489999998


Q ss_pred             -hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          165 -TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       165 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .+...         .+.   ....+.+++..|.-||+..
T Consensus        73 ~~~~~~---------~~~---~~~~~~~la~~l~~lH~~~  100 (256)
T TIGR02721        73 EVITLD---------QFV---ALDLLLELAALLHQLHSQP  100 (256)
T ss_pred             cccccc---------ccc---CchhHHHHHHHHHHHhCCC
Confidence             43210         010   1134678899999999876

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=85.92  E-value=1.7  Score=35.61  Aligned_cols=68  Identities=19%  Similarity=0.161  Sum_probs=50.5

Q ss_pred             HHHHHHHHhCCC-CceeeeceeeeeCCCCCccEEEEEeecchh-hHHHH---HHHHhhhcCCCCHHHHHHHHHHHHHHHH
Q 019844          123 NRELQIMQMLDH-PNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRI---ARNYSRIHQRMPLIYVKLYTYQICRALA  197 (335)
Q Consensus       123 ~~Ei~~l~~l~h-pnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~---l~~~~~~~~~l~~~~~~~i~~qi~~aL~  197 (335)
                      ..|.-+|+.+.+ +++.+++|++     .    -++|+||.+. ++...   +..    -...++.....|+.+++..+.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C-----G----~~~v~E~~~~~~~~~~~~~l~~----~~~~~w~~R~~iA~~lL~~l~   73 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC-----G----RFYVVEYVGAGSLYGIYRPLSQ----FLQSPWEQRAKIALQLLELLE   73 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC-----C----CEEEEEeecCcccccccccccc----ccccCHHHHHHHHHHHHHHHH
Confidence            468888999965 6999999998     3    2378999984 55321   111    123678888999999999999


Q ss_pred             HHHhCC
Q 019844          198 YIHNCI  203 (335)
Q Consensus       198 yLH~~~  203 (335)
                      +|+..-
T Consensus        74 ~l~~~~   79 (188)
T PF12260_consen   74 ELDHGP   79 (188)
T ss_pred             HHhcCC
Confidence            998754

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=85.56  E-value=4.2  Score=36.09  Aligned_cols=89  Identities=17%  Similarity=0.206  Sum_probs=54.3

Q ss_pred             ceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCC---CceeeeceeeeeCCC----CCccEEEEEeecchhhHH
Q 019844           95 FGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH---PNIVALKHCFFSTTD----KEELYLNLVLEYVPETVN  167 (335)
Q Consensus        95 fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~h---pnIv~~~~~~~~~~~----~~~~~~~iv~e~~~g~L~  167 (335)
                      -|.||++..  ++..+++|.+......+...+.++..|..   +.++.++..-   +.    ..+...|++|++++|.- 
T Consensus        19 ~~~v~~v~T--~~G~~~Lk~~~~~~~~l~~~~~~~~~L~~~G~~~~~~~~~t~---~G~~~~~~~~~~~~L~~wi~G~~-   92 (309)
T TIGR02904        19 TGKLFKVYT--DQGVFALKKLYADRNTIESFVSQIQVLSEKGFSRIVPVYPTK---DGSYYLFHGHFLYYLMPWLDIER-   92 (309)
T ss_pred             cCcEEEEEe--CCCCEEEEEeccchHhHHHHHHHHHHHHHcCCCcCCceeecC---CCCeeeEECCEEEEEeCCccccc-
Confidence            568899875  34469999997665555566666766643   4445542211   11    11233579999999810 


Q ss_pred             HHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          168 RIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       168 ~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                          .       +...   .-+.+++..|+-||..+
T Consensus        93 ----~-------~~~~---~~~~~~~~~LA~lH~~~  114 (309)
T TIGR02904        93 ----N-------EERN---YQHESMFQELALLHRKT  114 (309)
T ss_pred             ----c-------cCCH---HHHHHHHHHHHHHHHhh
Confidence                0       1111   33678888899999877

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=85.45  E-value=2.9  Score=36.89  Aligned_cols=96  Identities=19%  Similarity=0.264  Sum_probs=60.7

Q ss_pred             eeeeeccCceEEEEEEEcC------CCcEEEEEEecccc---hhHHHHHHHHHhCCCCce-eeeceeeeeCCCCCccEEE
Q 019844           87 EHVVGTGSFGVVFQAKCRE------TGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNI-VALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~------~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~  156 (335)
                      ++.|..|--..||++....      +++.|++|+.....   ....+|..++..+...++ .+++.++     .+    .
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~-----~~----~   73 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIF-----PN----G   73 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEe-----CC----C
Confidence            3456666677888887533      25789999875432   335689889988853333 3444444     21    2


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||++| .+....         +.   -..++.+++..|.-||+..
T Consensus        74 ~v~e~i~G~~l~~~~---------~~---~~~~~~~ia~~L~~lH~~~  109 (302)
T cd05156          74 RIEEFIPSRTLTTEE---------LR---DPDISAEIARRMAKLHSIV  109 (302)
T ss_pred             chhheeCCCcCCHhH---------cC---CcHHHHHHHHHHHHhhCCC
Confidence            68999998 443210         10   1235778999999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=85.07  E-value=2.3  Score=36.55  Aligned_cols=75  Identities=16%  Similarity=0.153  Sum_probs=52.5

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHH---HHHHhCCCCceeeeceeeeeCCCCCccEEEEEeecch
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNREL---QIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP  163 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei---~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~  163 (335)
                      ...+..|..+.|+.|+. .+|...++|+..... ....|.   ..|+..+-...|++++.-     ...  -.|++|.+.
T Consensus         7 ~~~~~~g~~s~V~pv~~-~dG~~avLKl~~p~~-~~~~E~~g~~~L~~w~G~GaVrll~~d-----~~~--~AlLLErl~   77 (253)
T PF04655_consen    7 DGPPAHGSSSLVVPVRR-ADGTPAVLKLAPPHA-EAEHEARGEAALRWWNGRGAVRLLAAD-----PER--GALLLERLD   77 (253)
T ss_pred             CCCCCCCcceEEEEEEc-CCCCeEEEEecCCcc-cchhhhhHHhHhheeCCCCceeeeccc-----ccc--chhhhhhcc
Confidence            34466788899999985 679999999775432 233444   668888888899998864     222  338999994


Q ss_pred             -h-hHHHHH
Q 019844          164 -E-TVNRIA  170 (335)
Q Consensus       164 -g-~L~~~l  170 (335)
                       | +|.++.
T Consensus        78 ~g~~L~~~~   86 (253)
T PF04655_consen   78 PGRSLASLP   86 (253)
T ss_pred             CCCchhhcc
Confidence             5 776554

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=84.62  E-value=6.8  Score=34.46  Aligned_cols=93  Identities=15%  Similarity=0.108  Sum_probs=54.7

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC---CCceeeeceeeeeCCCCCccEEEEEee
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD---HPNIVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      +-.+.|+-|....+|...  .+++.+.||+-... ...+..|..-|+.|.   --.|.+++.+.....     .-++|||
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~-----~~fLlle   92 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD-----DAFLLLE   92 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS-----CCEEEEE
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecChhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC-----CceEEEE
Confidence            346788989999999987  57888999977633 355778988888883   334556666653222     2379999


Q ss_pred             cchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          161 YVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       161 ~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      |++...          .. ..      -..++..+|+-||.
T Consensus        93 ~l~~~~----------~~-~~------~~~~lg~~LA~LH~  116 (288)
T PF03881_consen   93 FLEMGS----------PS-PP------DWEELGRQLAALHQ  116 (288)
T ss_dssp             -------------------CC------HHHHHHHHHHHHHH
T ss_pred             eecCCC----------CC-ch------hHHHHHHHHHHHhh
Confidence            988420          00 11      13467778888997

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=82.84  E-value=7.1  Score=34.57  Aligned_cols=101  Identities=8%  Similarity=-0.028  Sum_probs=60.2

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCc--eeeeceeeeeC-CCCCccEEEEEee
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPN--IVALKHCFFST-TDKEELYLNLVLE  160 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~-~~~~~~~~~iv~e  160 (335)
                      .++.++.|.-..+|++.. . +..+++|+....  ...+..|+.++..|...+  |.+++...... .....+..+++|+
T Consensus        26 ~i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e  103 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVE  103 (307)
T ss_pred             eccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEE
Confidence            366778887788999875 3 345778977542  345667888888874322  33433321000 0012344679999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |++| .+.          . .+.    ..+.++...|.-||...
T Consensus       104 ~i~G~~~~----------~-~~~----~~~~~~G~~LA~lH~~~  132 (307)
T TIGR00938       104 FLQGLSVG----------R-PTA----MHCRPVGEVLAWMHLAG  132 (307)
T ss_pred             eCCCCCCC----------C-CCH----HHHHHHHHHHHHHHhhh
Confidence            9998 331          1 111    23578888899999654

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	335
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-44
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		6e-44
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		6e-44
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		6e-44
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		6e-44
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		7e-44
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		7e-44
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		8e-44
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-43
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-43
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-43
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-43
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-43
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		3e-43
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		3e-43
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		3e-43
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-43
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		4e-43
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-43
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		5e-43
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-42
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-42
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		1e-25
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-17
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-09
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-08
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-08
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-08
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-08
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		5e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		5e-08
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-08
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		7e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-08
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-08
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-08
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-08
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		7e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-08
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-08
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		6e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-08
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		7e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-08
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		7e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-08
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-08
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		7e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-08
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-08
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		7e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-08
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-08
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-08
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-08
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		6e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		7e-08
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-08
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		6e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-08
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-08
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		7e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		7e-08
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		7e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		7e-08
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-04
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-08
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-05
4exu_A	371	Mapk13, Inactive Form Length = 371		8e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		8e-08
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-07
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		1e-07
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-07
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-07
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		6e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-07
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		6e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-07
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-05
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-07
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-07
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		9e-05
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-07
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-07
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		6e-05
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-07
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-07
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-07
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-07
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-07
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-07
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-07
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-07
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-07
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		3e-07
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-07
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-05
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-07
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		4e-07
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		4e-07
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		4e-07
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-07
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-07
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		7e-07
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		9e-07
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-06
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-06
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-06
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-06
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-06
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-06
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-06
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		4e-06
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		5e-06
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		5e-06
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		5e-06
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-06
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		5e-06
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-06
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-06
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		5e-06
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		5e-06
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		6e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		6e-06
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		6e-06
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		3e-05
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		4e-05
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-05
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		4e-05
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-05
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		4e-05
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		4e-05
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		3e-04
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		5e-05
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		5e-05
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		5e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-05
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-04
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-04
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		2e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		3e-04
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-04
2oza_B	366	Structure Of P38alpha Complex Length = 366		3e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-04
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-04
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-04
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		3e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-04
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-04
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		3e-04
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		4e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		4e-04
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		4e-04
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		4e-04
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		4e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		6e-04
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		6e-04
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		6e-04
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		6e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-04
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		6e-04
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		6e-04
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-04
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		6e-04
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		6e-04
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		6e-04
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		6e-04
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		6e-04
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-04
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		6e-04
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		6e-04
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-04
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		6e-04
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		6e-04
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		7e-04
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		7e-04
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		7e-04
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		7e-04
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		7e-04
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		7e-04
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		7e-04
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		7e-04
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		7e-04
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		7e-04
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-04
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		7e-04
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		7e-04
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		7e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-04
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		7e-04
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		7e-04
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		7e-04
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		7e-04
3hec_A	348	P38 In Complex With Imatinib Length = 348		7e-04
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		7e-04
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		7e-04
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		7e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		8e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		8e-04
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		9e-04
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		9e-04

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score =  174 bits (442), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 234 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 293
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 294 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 351
Query: 323 HARKQ 327
           HAR Q
Sbjct: 352 HARIQ 356

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 257 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 316
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 317 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 374
Query: 323 HARKQ 327
           HAR Q
Sbjct: 375 HARIQ 379

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 308 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 367
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 368 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 425
Query: 323 HARKQ 327
           HAR Q
Sbjct: 426 HARIQ 430

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 263 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 322
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 323 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 380
Query: 323 HARKQ 327
           HAR Q
Sbjct: 381 HARIQ 385

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score =  174 bits (441), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 267 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 326
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 327 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 384
Query: 323 HARKQ 327
           HAR Q
Sbjct: 385 HARIQ 389

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 263 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 322
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 323 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 380
Query: 323 HARKQ 327
           HAR Q
Sbjct: 381 HARIQ 385

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 265 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 324
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 325 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 382
Query: 323 HARKQ 327
           HAR Q
Sbjct: 383 HARIQ 387

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score =  174 bits (440), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 241 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 300
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 301 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 358
Query: 323 HARKQ 327
           HAR Q
Sbjct: 359 HARIQ 363

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 248 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 307
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 308 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 365
Query: 323 HARKQ 327
           HAR Q
Sbjct: 366 HARIQ 370

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 237 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 296
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 297 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 354
Query: 323 HARKQ 327
           HAR Q
Sbjct: 355 HARIQ 359

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 242 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 301
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 302 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 359
Query: 323 HARKQ 327
           HAR Q
Sbjct: 360 HARIQ 364

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score =  173 bits (439), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 241 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 300
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 301 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 358
Query: 323 HARKQ 327
           HAR Q
Sbjct: 359 HARIQ 363

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HARKQ 327
           HAR Q
Sbjct: 347 HARIQ 351

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 233 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 292
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 293 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 350
Query: 323 HAR 325
           HAR
Sbjct: 351 HAR 353

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HAR 325
           HAR
Sbjct: 347 HAR 349

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score =  172 bits (435), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HAR 325
           HAR
Sbjct: 347 HAR 349

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HAR 325
           HAR
Sbjct: 347 HAR 349

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 230 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 289
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 290 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 347
Query: 323 HAR 325
           HAR
Sbjct: 348 HAR 350

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 86/123 (69%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HAR 325
           HAR
Sbjct: 347 HAR 349

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score =  171 bits (433), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 93/125 (74%), Gaps = 3/125 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEF FPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HARKQ 327
           HAR Q
Sbjct: 347 HARIQ 351

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score =  170 bits (430), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/123 (69%), Positives = 92/123 (74%), Gaps = 3/123 (2%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEF FPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP-ETINRLIPE 322
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP  TI  LIP 
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATI--LIPP 346
Query: 323 HAR 325
           HAR
Sbjct: 347 HAR 349

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  169 bits (427), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/126 (61%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           +DQLVEIIKVLGTP+RE+IK MNPNY E KFPQI+PHP+ KVF+ R PP+A+DL+ R  +
Sbjct: 248 IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE 307
Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
           Y+P+ R TA+EA  HPFFDELR    R+PNGR LPPLFN+   ELS + P+ I+RL+P+H
Sbjct: 308 YTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELS-VRPDLISRLVPQH 366
Query: 324 ARKQNL 329
           A  + L
Sbjct: 367 AEAELL 372

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           +DQLV II+++GTPT+E++  MNP+YTE +FP +K   W K+  +  P  A+DL+ +  +
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307
Query: 264 YSPNLRCTALEACVHPFFDELRDP-------NTRLPNG--RPLPPLFNFKPPELSGIPPE 314
           Y P+LR    EA  HPFFD LR+        N+  P+G  + +P LFNF P ELS IP  
Sbjct: 308 YEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGN 367
Query: 315 TINRLIPEH 323
            +NR++P++
Sbjct: 368 VLNRILPKN 376

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/107 (43%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 206 QLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQK---RLPPEAVDLVCRFF 262
           QL EI++VLG P+RE ++ +NP++T+      K  PW  VF     +   EA DL+    
Sbjct: 240 QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALL 299
Query: 263 QYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP-LFNFKPPEL 308
           QY P  R    EA  HP+FDEL DP T+LPN + LP  LF F P E+
Sbjct: 300 QYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFLPNEI 346

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY +   P      W K+F K    +A+DL+ 
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINMKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLD 311
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           R   ++PN R T  EA  HP+ ++  DP        P    F F   EL  +P E +  L
Sbjct: 312 RMLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEP----FTFA-MELDDLPKERLKEL 366
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 367 IFQETARFQ 375

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 206 QLVEIIKVLGTP-TREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           QL+ I  ++GTP +  +++C+ +P   E+    P     P  K+F  R+ P+ +DL+ R 
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRM 289
Query: 262 FQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 301
             + P  R TA EA  HP+     DPN   P G P+PP F
Sbjct: 290 LVFDPAKRITAKEALEHPYLQTYHDPNDE-PEGEPIPPSF 328

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 206 QLVEIIKVLGTP-TREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           QL+ I  ++GTP +  +++C+ +P   E+    P     P  K+F  R+ P+ +DL+ R 
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRM 289
Query: 262 FQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 301
             + P  R TA EA  HP+     DPN   P G P+PP F
Sbjct: 290 LVFDPAKRITAKEALEHPYLQTYHDPNDE-PEGEPIPPSF 328

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 206 QLVEIIKVLGTP-TREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           QL+ I  ++GTP +  +++C+ +P   E+    P     P  K+F  R+ P+ +DL+ R 
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRM 289
Query: 262 FQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 301
             + P  R TA EA  HP+     DPN   P G P+PP F
Sbjct: 290 LVFDPAKRITAKEALEHPYLQTYHDPNDE-PEGEPIPPSF 328

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHC 143
           +G GS+GVVF+ + R+TG+IVAIKK L+       K+   RE+++++ L HPN+V L   
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI--HN 201
           F                      + +     R  + +P   VK  T+Q  +A+ +   HN
Sbjct: 71  F--------RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 202 CI 203
           CI
Sbjct: 123 CI 124

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 70  I-------------------HTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 111 LLQGLAFCHS 120

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 245
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 78  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 119 LLQGLAFCHS 128

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 200 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 253
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 78  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 119 LLQGLAFCHS 128

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 200 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 253
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 254 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 75  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 116 LLQGLAFCHS 125

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 197 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 250
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 296
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P   L   RP
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRLERP 306

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 74  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 115 LLQGLAFCHS 124

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 249
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 73  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 114 LLQGLAFCHS 123

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 248
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 73  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 114 LLQGLAFCHS 123

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 248
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 75  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 116 LLQGLAFCHS 125

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 197 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 250
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 251 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 74  I-------------------HTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQ 114
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 115 LLQGLAFCHS 124

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 249
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 70  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 111 LLQGLAFCHS 120

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 245
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 70  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 111 LLQGLAFCHS 120

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 245
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 73  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 113
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 114 LLQGLAFCHS 123

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 248
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 70  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 111 LLQGLAFCHS 120

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 245
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 70  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 111 LLQGLAFCHS 120

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 245
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 72  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 113 LLQGLAFCHS 122

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 247
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 72  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 113 LLQGLAFCHS 122

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 247
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 74  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 115 LLQGLAFCHS 124

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 249
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 72  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 113 LLQGLAFCHS 122

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 247
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 72  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 113 LLQGLAFCHS 122

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 247
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 12/103 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDE 283
             F K +PP   +   L+ +   Y PN R +A  A  HPFF +
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCR 260
           +DQL +I+KV G P  E ++ +N    +  + Q  P    K F +  P   P+A DL+ +
Sbjct: 248 LDQLTQILKVTGVPGTEFVQKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASPQAADLLEK 306
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL 297
             +   + R TA +A  HPFF+  RDP       +P 
Sbjct: 307 MLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPF 343

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP---PEAVDLVCR 260
           +DQL +I+KV G P  E ++ +N    +  + Q  P    K F +  P   P+A DL+ +
Sbjct: 230 LDQLTQILKVTGVPGTEFVQKLNDKAAK-SYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL 297
             +   + R TA +A  HPFF+  RDP       +P 
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPF 325

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
              T +K               ++  A         +PL  +K Y +Q+ + LA+ H+
Sbjct: 74  -IHTENKLYLVFEFLSMDLKKFMDASALT------GIPLPLIKSYLFQLLQGLAFCHS 124

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 249
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
              T +K               ++  A         +PL  +K Y +Q+ + LA+ H+
Sbjct: 72  -IHTENKLYLVFEFLSMDLKKFMDASALT------GIPLPLIKSYLFQLLQGLAFCHS 122

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 194 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 247
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 248 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
              T +K               ++  A         +PL  +K Y +Q+ + LA+ H+
Sbjct: 74  -IHTENKLYLVFEFLSMDLKDFMDASALT------GIPLPLIKSYLFQLLQGLAFCHS 124

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 249
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
              T +K               ++  A         +PL  +K Y +Q+ + LA+ H+
Sbjct: 73  -IHTENKLYLVFEFLSMDLKDFMDASALT------GIPLPLIKSYLFQLLQGLAFCHS 123

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 195 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 248
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 249 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
              T +K               ++  A         +PL  +K Y +Q+ + LA+ H+
Sbjct: 74  -IHTENKLYLVFEHVDQDLKKFMDASALT------GIPLPLIKSYLFQLLQGLAFCHS 124

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 196 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 249
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 250 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + L++ H+
Sbjct: 112 LLQGLSFCHS 121

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 242 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 299
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 300 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 354
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 355 IFEETARFQ 363

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 291
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 346
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 347 IFEETARFQ 355

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 295
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 350
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 351 IFEETARFQ 359

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKK------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
            +G G++GVV  A+ R TG+ VAIKK      V+ + +   REL+I++   H NI+A+K 
Sbjct: 62  TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 143 CFFSTTDKXXXXXXXXXXXXXXT-VNRIARNYSRIHQRMPLI--YVKLYTYQICRALAYI 199
               T                 + +++I      IH   PL   +V+ + YQ+ R L Y+
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQI------IHSSQPLTLEHVRYFLYQLLRGLKYM 175
Query: 200 HNCIV 204
           H+  V
Sbjct: 176 HSAQV 180

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           V QL  I+ VLGTP+   I+ +            P  +P PW  V+      +A+ L+ R
Sbjct: 270 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGR 328
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
             ++ P+ R +A  A  HPF  +  DP+
Sbjct: 329 MLRFEPSARISAAAALRHPFLAKYHDPD 356

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 291
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 346
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 347 IFEETARFQ 355

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 295
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 350
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 351 IFEETARFQ 359

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 311
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 312 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 366
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 367 IFEETARFQ 375

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 15/125 (12%)
Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKK------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
            +G G++GVV  A+ R TG+ VAIKK      V+ + +   REL+I++   H NI+A+K 
Sbjct: 61  TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 120
Query: 143 CFFSTTDKXXXXXXXXXXXXXXT-VNRIARNYSRIHQRMPLI--YVKLYTYQICRALAYI 199
               T                 + +++I      IH   PL   +V+ + YQ+ R L Y+
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQI------IHSSQPLTLEHVRYFLYQLLRGLKYM 174
Query: 200 HNCIV 204
           H+  V
Sbjct: 175 HSAQV 179

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 4/129 (3%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           V QL  I+ VLGTP+   I+ +            P  +P PW  V+      +A+ L+ R
Sbjct: 269 VHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPG-ADRQALSLLGR 327
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLI 320
             ++ P+ R +A  A  HPF  +  DP+       P    F+ +      I    +  + 
Sbjct: 328 MLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIE 387
Query: 321 PEHARKQNL 329
             HAR++ +
Sbjct: 388 DFHARREGI 396

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 293
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 294 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 348
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 349 IFEETARFQ 357

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 311
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 312 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 366
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 367 IFEETARFQ 375

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 232 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 289
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 290 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 344
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 345 IFEETARFQ 353

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 295
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 350
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 351 IFEETARFQ 359

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 296
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 297 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 351
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 352 IFEETARFQ 360

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 291
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 346
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 347 IFEETARFQ 355

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 296
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 297 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 351
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 352 IFEETARFQ 360

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 240 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 297
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 298 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 352
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 353 IFEETARFQ 361

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 231 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 288
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 289 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 343
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 344 IFEETARFQ 352

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 295
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 350
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 351 IFEETARFQ 359

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 295
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 350
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 351 IFEETARFQ 359

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 295
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 296 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 350
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 351 IFEETARFQ 359

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+ K+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 71  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 112 LLQGLAFCHS 121

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 193 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 246
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 247 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 37/130 (28%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+ + TGE+VA+ K+  D   +       RE+ +++ L+HPNIV L   
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 144 FFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRM------------PLIYVKLYTYQ 191
                                T N++   +  +HQ +            PL  +K Y +Q
Sbjct: 70  I-------------------HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 192 ICRALAYIHN 201
           + + LA+ H+
Sbjct: 111 LLQGLAFCHS 120

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH--PWHK 244
           ++   + R   +  +  +DQL  I + LGTP     + + P  T    P  KP    W +
Sbjct: 192 IFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD----EVVWPGVTSM--PDYKPSFPKWAR 245
Query: 245 V-FQKRLPP---EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
             F K +PP   +   L+ +   Y PN R +A  A  HPFF ++  P
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 204 VDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL 257
            DQL+ I ++LGTP  +      E+   +PN+T ++     P PW   F K L    +DL
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE-----PLPWES-FLKGLDESGIDL 260
Query: 258 VCRFFQYSPNLRCTALEACVHPFFDE 283
           + +  +  PN R TA +A  H +F E
Sbjct: 261 LSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 204 VDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL 257
            DQL+ I ++LGTP  +      E+   +PN+T ++     P PW   F K L    +DL
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE-----PLPWES-FLKGLDESGIDL 260
Query: 258 VCRFFQYSPNLRCTALEACVHPFFDE 283
           + +  +  PN R TA +A  H +F E
Sbjct: 261 LSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 12/86 (13%)
Query: 204 VDQLVEIIKVLGTPTRE------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL 257
            DQL+ I ++LGTP  +      E+   +PN+T ++     P PW   F K L    +DL
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE-----PLPWES-FLKGLDESGIDL 260
Query: 258 VCRFFQYSPNLRCTALEACVHPFFDE 283
           + +  +  PN R TA +A  H +F E
Sbjct: 261 LSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 293
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+  +  DP+       P    F F   EL  +P E +  L
Sbjct: 294 KMLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 348
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 349 IFEETARFQ 357

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREEIKCM----NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P +E++ C+      NY     P     PW+++F      +A+DL+ 
Sbjct: 232 LDQLNHILGILGSPEQEDLNCIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 289
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 290 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 344
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 345 IFEETARFQ 353

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 204 VDQLVEIIKVLGTPTREEIKC---MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I+ +LG+P++E++ C   +         P     PW+++F      +A+DL+ +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNA-DSKALDLLDK 294
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLI 320
              ++P+ R    +A  HP+  +  DP+       P    F F   EL  +P E +  LI
Sbjct: 295 MLTFNPHKRIEVEQALAHPYLAQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKELI 349
Query: 321 -PEHARKQ 327
             E AR Q
Sbjct: 350 FEETARFQ 357

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
           +G G+FG VF+A+ R+TG+ VA+KKVL +   +       RE++I+Q+L H N+V L
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
           +G G+FG VF+A+ R+TG+ VA+KKVL +   +       RE++I+Q+L H N+V L
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 81

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
           +G G+FG VF+A+ R+TG+ VA+KKVL +   +       RE++I+Q+L H N+V L
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 6/57 (10%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
           +G G+FG VF+A+ R+TG+ VA+KKVL +   +       RE++I+Q+L H N+V L
Sbjct: 26  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 82

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCFFST 147
           +G GS+G V++A  +ETG+IVAIK+V  +   +   +E+ IMQ  D P++V     +F  
Sbjct: 37  LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 148 TD 149
           TD
Sbjct: 97  TD 98

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREE----IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E+    I     NY     P     PW+++F      +A+DL+ 
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 291
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 346
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 347 IFEETARFQ 355

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 255 DQLVKIAKVLGT------DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 308
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 309 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 343

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Query: 204 VDQLVEIIKVLGTPTREE----IKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL  I+ +LG+P++E+    I     NY     P     PW+++F      +A+DL+ 
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYL-LSLPHKNKVPWNRLFPNA-DSKALDLLD 291
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRL 319
           +   ++P+ R    +A  HP+ ++  DP+       P    F F   EL  +P E +  L
Sbjct: 292 KMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAP----FKFD-MELDDLPKEKLKEL 346
Query: 320 I-PEHARKQ 327
           I  E AR Q
Sbjct: 347 IFEETARFQ 355

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKH 142
           +GTG FG V +   ++TGE VAIK+  Q+   KNR     E+QIM+ L+HPN+V+ + 
Sbjct: 22  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 5/58 (8%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALKH 142
           +GTG FG V +   ++TGE VAIK+  Q+   KNR     E+QIM+ L+HPN+V+ + 
Sbjct: 23  LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 235 DQLVKIAKVLGT------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 288
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 289 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 234 DQLVKIAKVLGT------DGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 235 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 288
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 289 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 323

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVD---LVCRF 261
           DQL  I  +LGTP+ E+I+ +     + ++ +I P        +R P  + D   L+ R 
Sbjct: 322 DQLNVIFNILGTPSEEDIEALEKEDAK-RYIRIFPKREGTDLAERFPASSADAIHLLKRM 380
Query: 262 FQYSPNLRCTALEACVHPFFDELR----DPNTRLPNGRPLPPLFNFKPPELSGIPPETIN 317
             ++PN R T  E   HPFF E+R    + N       P     N   P+L     + I 
Sbjct: 381 LVFNPNKRITINECLAHPFFKEVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQ 440
Query: 318 RLIPE 322
           R  PE
Sbjct: 441 RYHPE 445

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 236 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 289
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 290 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 324

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 20/95 (21%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF---PQIKP-------HPWHKVF----QKRL 250
           DQLV+I KVLGT        +N    +++    PQ++         PW K      Q  +
Sbjct: 234 DQLVKIAKVLGTDG------LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLV 287
Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
            PEA+D + +  +Y    R TALEA  HP+F ++R
Sbjct: 288 SPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQVR 322

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
           +GTG+FGVV +   R TG   A K V+     DK    +E+Q M +L HP +V L   F 
Sbjct: 59  LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
              D                  ++A  ++++ +   + Y++    Q+C+ L ++H
Sbjct: 118 --EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMH 166

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
           +GTG+FGVV +   R TG   A K V+     DK    +E+Q M +L HP +V L   F 
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 146 STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
              D                  ++A  ++++ +   + Y++    Q+C+ L ++H
Sbjct: 224 --EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMH 272

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 8/123 (6%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
           +G G  G+VF A   +  + VAIKK++    Q  ++  RE++I++ LDH NIV +     
Sbjct: 19  LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 146 STTDKXXXXXXXXXXXXXXTV--NRIARNYSRIHQRMPLI--YVKLYTYQICRALAYIHN 201
            +  +               +    +  + + + ++ PL+  + +L+ YQ+ R L YIH+
Sbjct: 79  PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 202 CIV 204
             V
Sbjct: 139 ANV 141

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 204 VDQLVEIIKVLGTPTREEI--KCMNPNYTEFK-FPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I + LGTPT E+    C  P+Y  FK FP I   P H +F      + +DL+  
Sbjct: 219 LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI---PLHHIFSAA-GDDLLDLIQG 274
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK 304
            F ++P  R TA +A    +F     P       RP  P+   K
Sbjct: 275 LFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLK 318

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCF 144
           ++G+G FG VF+AK R  G+   IK+V  +     RE++ +  LDH NIV    C+
Sbjct: 18  LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCW 73

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +QL +I++V+GTP  E++   +     +Y       +    W  V      P A+DL+ +
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA-DPVALDLIAK 299
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDP 287
             +++P  R +  +A  HP+F+ L DP
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFDP 326

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 205 DQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +QL +I++V+GTP  E++   +     +Y       +    W  V      P A+DL+ +
Sbjct: 241 NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTA-DPVALDLIAK 299
Query: 261 FFQYSPNLRCTALEACVHPFFDELRDP 287
             +++P  R +  +A  HP+F+ L DP
Sbjct: 300 MLEFNPQRRISTEQALRHPYFESLFDP 326

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP-------PEAVD 256
           +DQL  I++V+GTP+ E +  ++  +       + P P     QK L        P A+D
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP-----QKDLSSIFRGANPLAID 289
Query: 257 LVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 296
           L+ R      + R +A EA  H +F +  DP    P   P
Sbjct: 290 LLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 328

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQ--KRLPPEAVDLVCRF 261
           +DQL  I++V+GTP+ E +  ++  +       + P P   +    +   P A+DL+ R 
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRM 294
Query: 262 FQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 296
                + R +A EA  H +F +  DP    P   P
Sbjct: 295 LVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 328

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCF 144
            ++G+G FG VF+AK R  G+   I++V  +     RE++ +  LDH NIV    C+
Sbjct: 18  ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCW 74

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 6/58 (10%)
Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVAL 140
           +VG GS+G+V + + ++TG IVAIKK L+       K+   RE+++++ L H N+V L
Sbjct: 32  LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL 89

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
           Y  + V+G GSFG V   K + TG+  A+K + +       DK    RE+Q+++ LDHPN
Sbjct: 51  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 137 IVALKHCF 144
           I+ L   F
Sbjct: 111 IMKLYEFF 118

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
           Y  + V+G GSFG V   K + TG+  A+K + +       DK    RE+Q+++ LDHPN
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 137 IVALKHCF 144
           I+ L   F
Sbjct: 88  IMKLYEFF 95

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
           Y  + V+G GSFG V   K + TG+  A+K + +       DK    RE+Q+++ LDHPN
Sbjct: 52  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 137 IVALKHCF 144
           I+ L   F
Sbjct: 112 IMKLYEFF 119

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++G VF+AK RET EIVA+K+V  D   +       RE+ +++ L H NIV L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 144 FFS 146
             S
Sbjct: 70  LHS 72

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 201 NCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQK------RLPPEA 254
           N + DQL  I ++LGTPT E+   M       K P  KP+P +           +L    
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATG 259
Query: 255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
            DL+    + +P  R +A EA  HP+F +   P
Sbjct: 260 RDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++G VF+AK RET EIVA+K+V  D   +       RE+ +++ L H NIV L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 144 FFS 146
             S
Sbjct: 70  LHS 72

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 201 NCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQK------RLPPEA 254
           N + DQL  I ++LGTPT E+   M       K P  KP+P +           +L    
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMT------KLPDYKPYPMYPATTSLVNVVPKLNATG 259
Query: 255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
            DL+    + +P  R +A EA  HP+F +   P
Sbjct: 260 RDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP-------PEAVD 256
           +DQL  I++V+GTP+ E +  ++  +       + P P     QK L        P A+D
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMP-----QKDLSSIFRGANPLAID 281
Query: 257 LVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 296
           L+ R      + R +A EA  H +F +  DP    P   P
Sbjct: 282 LLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE-PEAEP 320

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
           Y  + V+G GSFG V   K + TG+  A+K + +       DK    RE+Q+++ LDHPN
Sbjct: 34  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 137 IVALKHCF 144
           I+ L   F
Sbjct: 94  IMKLYEFF 101

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN---RELQIMQMLDHPNIVA 139
           E  +G G F  V++A C   G  VA+KKV    L D + +    +E+ +++ L+HPN++ 
Sbjct: 37  EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
               ++++  +               ++R+ +++ +  + +P   V  Y  Q+C AL ++
Sbjct: 97  ----YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 200 HN 201
           H+
Sbjct: 153 HS 154

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-------DKRYKNRELQIMQMLDHPN 136
           Y  + V+G GSFG V   K + TG+  A+K + +       DK    RE+Q+++ LDHPN
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 137 IVALKHCF 144
           I  L   F
Sbjct: 88  IXKLYEFF 95

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 21  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 199 I 199
           +
Sbjct: 133 L 133

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           +DQL EI+KV GTP  E ++ +      NY +   P+++   +  +      P AV+L+ 
Sbjct: 232 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK-GLPELEKKDFASILTNA-SPLAVNLLE 289
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRD 286
           +        R TA EA  HP+F+ L D
Sbjct: 290 KMLVLDAEQRVTAGEALAHPYFESLHD 316

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 205 DQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           DQL +I  +LGTP   E   +   P + +  F   +  PW  +       E +DL+    
Sbjct: 227 DQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPG-FCQEGIDLLSNML 285
Query: 263 QYSPNLRCTALEACVHPFFDELRDPN 288
            + PN R +A +A  HP+F +L DP 
Sbjct: 286 CFDPNKRISARDAMNHPYFKDL-DPQ 310

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 205 DQLVEIIKVLGTPTREEIKCMN--PNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
           DQL +I  +LGTP   E   +   P + +  F   +  PW  +       E +DL+    
Sbjct: 227 DQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPG-FCQEGIDLLSNML 285
Query: 263 QYSPNLRCTALEACVHPFFDELRDPN 288
            + PN R +A +A  HP+F +L DP 
Sbjct: 286 CFDPNKRISARDAMNHPYFKDL-DPQ 310

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 201 NCIVDQLVEIIKVLGTPTREEIKCM--NPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLV 258
           + + +QL  I ++LGTPT E    +  N  +  + +P+ +          RL  +  DL+
Sbjct: 204 STVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLS-HAPRLDSDGADLL 262
Query: 259 CRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPN 293
            +  Q+    R +A +A  HPFF  L +   +LP+
Sbjct: 263 TKLLQFEGRNRISAEDAMKHPFFLSLGERIHKLPD 297

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I ++     Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKS-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 21  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 199 I 199
           +
Sbjct: 133 L 133

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
           +G GSFG V+ A+     E+VAIKK+    +  N       +E++ +Q L HPN +  + 
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 143 CFF 145
           C+ 
Sbjct: 122 CYL 124

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKH 142
           +G GSFG V+ A+     E+VAIKK+    +  N       +E++ +Q L HPN +  + 
Sbjct: 23  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 143 CFF 145
           C+ 
Sbjct: 83  CYL 85

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 23  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 199 I 199
           +
Sbjct: 135 L 135

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 25  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 83  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 199 I 199
           +
Sbjct: 137 L 137

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 18  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 199 I 199
           +
Sbjct: 130 L 130

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 24  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 199 I 199
           +
Sbjct: 136 L 136

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 36  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 199 I 199
           +
Sbjct: 148 L 148

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 49  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 199 I 199
           +
Sbjct: 161 L 161

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLD-HPNIVALKH 142
           +G G++G+V+++  R TGE+VA+KK+        D +   RE+ I+  L  H NIV L +
Sbjct: 17  LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 143 CFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
              +  D+               V R A     +H++    YV    YQ+ + + Y+H+
Sbjct: 77  VLRADNDRDVYLVFDYMETDLHAVIR-ANILEPVHKQ----YV---VYQLIKVIKYLHS 127

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPH-------------PWHKVFQKRL 250
           ++QL  II V+  P+ E+++ +   + +     +K                W  +  K  
Sbjct: 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN 296
Query: 251 PP-----EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 288
           P      EA+DL+ +  Q++PN R +A +A  HPF     +PN
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 18  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 199 I 199
           +
Sbjct: 130 L 130

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 16  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 199 I 199
           +
Sbjct: 128 L 128

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 17  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 199 I 199
           +
Sbjct: 129 L 129

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 22  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 199 I 199
           +
Sbjct: 134 L 134

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 36  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 199 I 199
           +
Sbjct: 148 L 148

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 18  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 199 I 199
           +
Sbjct: 130 L 130

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ----IMQMLDHPNIV 138
           ++I   V+G+G+F  VF  K R TG++ A+K + +   +++  L+    +++ + H NIV
Sbjct: 10  TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 139 ALKHCFFSTT 148
            L+  + STT
Sbjct: 70  TLEDIYESTT 79

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 19  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R+Y + H +R+  I +  YT QIC+ + Y
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGS------LRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 199 I 199
           +
Sbjct: 131 L 131

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 163
Query: 202 C 202
Sbjct: 164 A 164

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKX-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 36  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 C 202
Sbjct: 150 A 150

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 49  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 162
Query: 202 C 202
Sbjct: 163 A 163

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 50  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 163
Query: 202 C 202
Sbjct: 164 A 164

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 40  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 98
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 99  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 153
Query: 202 C 202
Sbjct: 154 A 154

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKX-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 C 202
Sbjct: 140 A 140

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 26  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 C 202
Sbjct: 140 A 140

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 76  GNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIM 129
           G++K  ++  Y  E+ +G GS+G V  A  + T    A KK+    ++D     +E++IM
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60
Query: 130 QMLDHPNIVALKHCFFSTTD 149
           + LDHPNI+ L   F   TD
Sbjct: 61  KSLDHPNIIRLYETFEDNTD 80

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 75  NGNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQI 128
            G++K  ++  Y  E+ +G GS+G V  A  + T    A KK+    ++D     +E++I
Sbjct: 17  QGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEI 76
Query: 129 MQMLDHPNIVALKHCFFSTTD 149
           M+ LDHPNI+ L   F   TD
Sbjct: 77  MKSLDHPNIIRLYETFEDNTD 97

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 204 VDQLVEIIKVLGTPTREEIKCMNP----NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           ++QL +I+++ GTP    I  M      NY     PQ+    +  VF     P AVDL+ 
Sbjct: 258 INQLQQIMRLTGTPPASVISRMPSHEARNYIN-SLPQMPKRNFADVFIGA-NPLAVDLLE 315
Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPEL 308
           +      + R TA EA  HP+F +  DP+   P   P    F  +  E+
Sbjct: 316 KMLVLDTDKRITASEALAHPYFSQYHDPDDE-PESEPYDQSFESRQLEI 363

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 19/121 (15%)
Query: 90  VGTGSFGVVFQAKCR------ETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVA 139
           +G G+FG V    CR       TGE+VA+KK+        R   RE++I++ L H NIV 
Sbjct: 21  LGKGNFGSV--EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 140 LKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIH-QRMPLIYVKLYTYQICRALAY 198
            K   +S   +                    R Y + H +R+  I +  YT QIC+ + Y
Sbjct: 79  YKGVCYSAGRRNLKLIMEFLPYGS------LREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 199 I 199
           +
Sbjct: 133 L 133

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 154
Query: 202 C 202
Sbjct: 155 A 155

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 C 202
Sbjct: 150 A 150

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 49  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 107
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 162
Query: 202 C 202
Sbjct: 163 A 163

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 C 202
Sbjct: 146 A 146

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 C 202
Sbjct: 149 A 149

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 166
Query: 202 C 202
Sbjct: 167 A 167

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 50  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 108
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 163
Query: 202 C 202
Sbjct: 164 A 164

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 53  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 111
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 166
Query: 202 C 202
Sbjct: 167 A 167

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 C 202
Sbjct: 149 A 149

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 C 202
Sbjct: 146 A 146

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 C 202
Sbjct: 150 A 150

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 C 202
Sbjct: 146 A 146

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 155
Query: 202 C 202
Sbjct: 156 A 156

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 36  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 94
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 149
Query: 202 C 202
Sbjct: 150 A 150

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 155
Query: 202 C 202
Sbjct: 156 A 156

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 32  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 90
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 145
Query: 202 C 202
Sbjct: 146 A 146

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 42  VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 100
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 155
Query: 202 C 202
Sbjct: 156 A 156

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 C 202
Sbjct: 151 A 151

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 86  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 140
Query: 202 C 202
Sbjct: 141 A 141

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 35  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 C 202
Sbjct: 149 A 149

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 41  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 99
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 154
Query: 202 C 202
Sbjct: 155 A 155

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 29  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 87
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 88  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 142
Query: 202 C 202
Sbjct: 143 A 143

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 C 202
Sbjct: 151 A 151

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 28  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 86
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 87  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 141
Query: 202 C 202
Sbjct: 142 A 142

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 C 202
Sbjct: 151 A 151

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 26  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 84
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 202 C 202
Sbjct: 140 A 140

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 37  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 95
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 150
Query: 202 C 202
Sbjct: 151 A 151

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 27  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 85
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 86  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 140
Query: 202 C 202
Sbjct: 141 A 141

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           VG+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 30  VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 88
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 143
Query: 202 C 202
Sbjct: 144 A 144

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 85  IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVAL 140
           I   V+G G FG   +   RETGE++ +K+++    + +R   +E+++M+ L+HPN++  
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 14/121 (11%)
Query: 90  VGTGSFGVVFQAKCRETGEIVAIKK-------VLQDKRYKNRELQIMQMLDHPNIVALKH 142
           +G+G++G V  A   +TG  VA+KK       ++  KR   REL++++ + H N++ L  
Sbjct: 35  IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMKHENVIGLLD 93
Query: 143 CFF-STTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F  + + +               +N I +      Q++   +V+   YQI R L YIH+
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHS 148
Query: 202 C 202
Sbjct: 149 A 149

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
            +GTGSFG V   K +ETG   A+K + + K  K ++++       I+Q ++ P +V L+
Sbjct: 48  TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           + F   ++                + RI R +S  H R        Y  QI     Y+H+
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLHS 159
Query: 202 C 202
Sbjct: 160 L 160

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ-------IMQMLDHPNIVALK 141
            +GTGSFG V   K +ETG   A+K + + K  K ++++       I+Q ++ P +V L+
Sbjct: 48  TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 142 HCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           + F   ++                + RI R +S  H R        Y  QI     Y+H+
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHAR-------FYAAQIVLTFEYLHS 159
Query: 202 C 202
Sbjct: 160 L 160

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-67
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-65
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-66
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	9e-66
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-64
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	8e-60
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-61
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-55
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-24
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-18
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-24
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-17
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-24
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-23
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	6e-23
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-17
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-22
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-17
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-22
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-22
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-22
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-22
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-16
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-22
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-22
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-22
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	7e-17
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-22
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-16
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-22
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-21
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	5e-18
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-21
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-21
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-21
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-21
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	4e-16
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-21
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-19
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-21
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	6e-21
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-18
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-21
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	8e-21
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-20
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-20
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	8e-18
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-20
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-20
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	4e-20
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-17
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	5e-20
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-15
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-20
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-20
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-19
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	7e-20
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	8e-18
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	7e-20
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-20
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	9e-20
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-19
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	1e-19
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-18
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-19
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-19
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-19
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-19
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-19
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-17
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-19
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	4e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-19
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	6e-19
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-19
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-19
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-18
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-18
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-18
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-14
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-18
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	1e-16
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-18
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	7e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-18
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-18
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-18
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-18
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-17
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-18
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	4e-18
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-18
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	4e-17
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	6e-18
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	6e-18
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-17
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-18
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	8e-18
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-18
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-17
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-17
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-17
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-16
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-17
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-17
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-17
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-17
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-17
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-17
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-17
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	6e-17
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	6e-17
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-17
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-16
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-16
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-16
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-16
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-16
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-16
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-16
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-16
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-16
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-16
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-16
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-16
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	8e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-15
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-15
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-15
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-15
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	5e-15
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-15
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-14
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-14
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-14
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-14
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-14
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-14
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-14
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-14
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-14
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-14
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-13
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-13
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-13
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-13
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-13
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-13
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	6e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	7e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	8e-13
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	9e-13
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-12
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-12
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-12
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-12
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-12
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-12
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	5e-12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	5e-12
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-12
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-12
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	6e-12
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-12
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-12
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-11
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-11
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-11
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-11
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-11
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-11
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	4e-11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-11
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-11
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-10
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-10
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-10
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-10
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-10
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	3e-10
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-10
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	5e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-10
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-10
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-10
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	9e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-09
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-09
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-09
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-09
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-09
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	4e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-09
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	9e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	2e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-08
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-05
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-08
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-08
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-08
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	9e-08
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-08
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-07
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	9e-07
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-06
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	3e-06
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-06
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	2e-05
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	2e-05
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-05
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-04

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  216 bits (551), Expect = 3e-67
 Identities = 86/145 (59%), Positives = 113/145 (77%), Gaps = 3/145 (2%)

Query: 57  DGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL 116
           D  G++   V+ T   G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVL
Sbjct: 31  DKDGSKVTTVVATP--GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL 88

Query: 117 QDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDK-EELYLNLVLEYVPETVNRIARNYSR 175
           QDKR+KNRELQIM+ LDH NIV L++ F+S+ +K +E+YLNLVL+YVPETV R+AR+YSR
Sbjct: 89  QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR 148

Query: 176 IHQRMPLIYVKLYTYQICRALAYIH 200
             Q +P+IYVKLY YQ+ R+LAYIH
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIH 173

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  211 bits (539), Expect = 2e-65
 Identities = 84/124 (67%), Positives = 91/124 (73%), Gaps = 1/124 (0%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 263 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 322

Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS   P     LIP H
Sbjct: 323 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELS-SNPPLATILIPPH 381

Query: 324 ARKQ 327
           AR Q
Sbjct: 382 ARIQ 385

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  213 bits (545), Expect = 1e-66
 Identities = 78/126 (61%), Positives = 99/126 (78%), Gaps = 1/126 (0%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           +DQLVEIIKVLGTP+RE+IK MNPNY E KFPQI+PHP+ KVF+ R PP+A+DL+ R  +
Sbjct: 248 IDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLE 307

Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
           Y+P+ R TA+EA  HPFFDELR    R+PNGR LPPLFN+   ELS + P+ I+RL+P+H
Sbjct: 308 YTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELS-VRPDLISRLVPQH 366

Query: 324 ARKQNL 329
           A  + L
Sbjct: 367 AEAELL 372

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  211 bits (539), Expect = 9e-66
 Identities = 76/150 (50%), Positives = 106/150 (70%), Gaps = 3/150 (2%)

Query: 52  EPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVA 111
               ++ +      +      G+ G  ++ ++Y    V+G GSFGVVFQAK  E+ E VA
Sbjct: 11  NGVKLNPLDDPNKVIKVLASDGKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VA 68

Query: 112 IKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE-ELYLNLVLEYVPETVNRIA 170
           IKKVLQDKR+KNRELQIM+++ HPN+V LK  F+S  DK+ E++LNLVLEYVPETV R +
Sbjct: 69  IKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRAS 128

Query: 171 RNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           R+Y+++ Q MP++ +KLY YQ+ R+LAYIH
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  205 bits (525), Expect = 5e-64
 Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 7/145 (4%)

Query: 64  GHVIRTTIGGRNG--NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRY 121
           G ++           + K+   +  E + G G+FG V   K + TG  VAIKKV+QD R+
Sbjct: 3   GSMMSLNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF 62

Query: 122 KNRELQIMQML---DHPNIVALKHCFFSTT--DKEELYLNLVLEYVPETVNRIARNYSRI 176
           +NRELQIMQ L    HPNIV L+  F++    D+ ++YLN+V+EYVP+T++R  RNY R 
Sbjct: 63  RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRR 122

Query: 177 HQRMPLIYVKLYTYQICRALAYIHN 201
               P I +K++ +Q+ R++  +H 
Sbjct: 123 QVAPPPILIKVFLFQLIRSIGCLHL 147

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  194 bits (496), Expect = 8e-60
 Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 4/123 (3%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQK---RLPPEAVDLVCR 260
             QL EI++VLG P+RE ++ +NP++T+      K  PW  VF     +   EA DL+  
Sbjct: 238 AGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSA 297

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP-LFNFKPPELSGIPPETINRL 319
             QY P  R    EA  HP+FDEL DP T+LPN + LP  LF F P E+  +      +L
Sbjct: 298 LLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFLPNEIEVMSEAQKAKL 357

Query: 320 IPE 322
           + +
Sbjct: 358 VRK 360

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  198 bits (506), Expect = 4e-61
 Identities = 56/134 (41%), Positives = 83/134 (61%), Gaps = 9/134 (6%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           +DQLV II+++GTPT+E++  MNP+YTE +FP +K   W K+  +  P  A+DL+ +  +
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307

Query: 264 YSPNLRCTALEACVHPFFDELRDP-------NTRLPNG--RPLPPLFNFKPPELSGIPPE 314
           Y P+LR    EA  HPFFD LR+        N+  P+G  + +P LFNF P ELS IP  
Sbjct: 308 YEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGN 367

Query: 315 TINRLIPEHARKQN 328
            +NR++P++     
Sbjct: 368 VLNRILPKNFSPNY 381

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  183 bits (466), Expect = 4e-55
 Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 33/158 (20%)

Query: 76  GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHP 135
           G       Y     +GTGSFG+V +    E+G+  A+KKVLQD RYKNREL IM++LDH 
Sbjct: 1   GLETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHV 60

Query: 136 NIVALKHCFFSTTDK---------------------------------EELYLNLVLEYV 162
           NI+ L   F++T D+                                 +  YLN+++EYV
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120

Query: 163 PETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           P+T++++ +++ R  + +P+  + +Y YQ+ RA+ +IH
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  100 bits (252), Expect = 1e-24
 Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 14/117 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G GS+GVVF+ + R+TG+IVAIKK L+ +          RE+++++ L HPN+V L   
Sbjct: 11  IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           F     K  L+  LV EY   TV      Y    + +P   VK  T+Q  +A+ + H
Sbjct: 71  F---RRKRRLH--LVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCH 119

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 84.2 bits (209), Expect = 1e-18
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 5/104 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM--NPNYTEFKFPQIKP-HPWHKVFQKRLPPEAVDLVCR 260
           VDQL  I K LG       +    N  ++  K P  +   P    F   +   A+ L+  
Sbjct: 209 VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKF-PNISYPALGLLKG 267

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK 304
                P  R T  +   HP+F+ +R+    L      P    + 
Sbjct: 268 CLHMDPTERLTCEQLLHHPYFENIREI-EDLAKEHDKPAENLYF 310

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  100 bits (252), Expect = 1e-24
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 14/117 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           VG GS+G+V + + ++TG IVAIKK L+    K       RE+++++ L H N+V L   
Sbjct: 33  VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                 K+  Y  LV E+V  T+      +      +    V+ Y +QI   + + H
Sbjct: 93  C---KKKKRWY--LVFEFVDHTILDDLELFP---NGLDYQVVQKYLFQIINGIGFCH 141

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 204 VDQLVEIIKVLGTPTRE--EIKCMNPNYTEFKFPQIKPH-PWHKVFQKRLPPEAVDLVCR 260
           +DQL  I+  LG       E+   NP +   + P+IK   P  + +  +L    +DL  +
Sbjct: 231 IDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRY-PKLSEVVIDLAKK 289

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDP 287
                P+ R    E   H FF      
Sbjct: 290 CLHIDPDKRPFCAELLHHDFFQMDGFA 316

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 99.7 bits (249), Expect = 3e-24
 Identities = 49/253 (19%), Positives = 84/253 (33%), Gaps = 68/253 (26%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVL------QDKRYKNRELQIM-QMLDHPNIVALK 141
            +G GS+G VF+ + +E G + A+K+ +      +D+  K  E+    ++  HP  V L+
Sbjct: 64  RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
             +    +   LY  L  E    +   + ++       +P   V  Y      ALA++H 
Sbjct: 124 QAWE---EGGILY--LQTELCGPS---LQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS 175

Query: 201 -----------NCIVDQLVEI-------IKVLGTPTREEIKC-----MNP-----NYTE- 231
                      N  +             +  LGT    E++      M P     +Y   
Sbjct: 176 QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTA 235

Query: 232 ----------FKFPQIKPHP-----WHKVFQKRLPP--------EAVDLVCRFFQYSPNL 268
                      +       P     W ++ Q  LPP        E   ++    +  P L
Sbjct: 236 ADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKL 295

Query: 269 RCTALEACVHPFF 281
           R TA      P  
Sbjct: 296 RATAEALLALPVL 308

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 96.7 bits (241), Expect = 4e-23
 Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 13/129 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKNRELQIMQMLDHPNIV 138
           ++   ++G G+   VF+ + ++TG++ AIK       L+    + RE ++++ L+H NIV
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
            L      TT +      L++E+ P       +    +     +P     +    +   +
Sbjct: 71  KLFAIEEETTTR-HKV--LIMEFCPCGSLYTVLEEPSNA--YGLPESEFLIVLRDVVGGM 125

Query: 197 AYIH-NCIV 204
            ++  N IV
Sbjct: 126 NHLRENGIV 134

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 96.5 bits (241), Expect = 6e-23
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 17/121 (14%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVAL 140
           +G G F  V++A+ + T +IVAIKK+    R +          RE++++Q L HPNI+ L
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
               F         ++LV +++   +  I ++ S     +   ++K Y     + L Y+H
Sbjct: 78  -LDAFGHKSN----ISLVFDFMETDLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLH 129

Query: 201 N 201
            
Sbjct: 130 Q 130

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 30/99 (30%), Positives = 41/99 (41%), Gaps = 9/99 (9%)

Query: 204 VDQLVEIIKVLGTPTREEI---KCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I + LGTPT EE     C  P+Y  F        P H +F      + +DL+  
Sbjct: 219 LDQLTRIFETLGTPT-EEQWPDMCSLPDYVTF--KSFPGIPLHHIF-SAAGDDLLDLIQG 274

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP 299
            F ++P  R TA +A    +F     P        P P 
Sbjct: 275 LFLFNPCARITATQALKMKYFSNR--PGPTPGCQLPRPN 311

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 94.9 bits (237), Expect = 1e-22
 Identities = 35/124 (28%), Positives = 66/124 (53%), Gaps = 13/124 (10%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPN 136
           ++     +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPN
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           IV L     +        L LV E++ + + +     +     +PL  +K Y +Q+ + L
Sbjct: 64  IVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGL 116

Query: 197 AYIH 200
           A+ H
Sbjct: 117 AFCH 120

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 15/100 (15%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I + LGTP       +  M P+Y +  FP+     + KV    L  +   L+ +
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSM-PDY-KPSFPKWARQDFSKVV-PPLDEDGRSLLSQ 266

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPL 300
              Y PN R +A  A  HPFF ++          +P+P L
Sbjct: 267 MLHYDPNKRISAKAALAHPFFQDV---------TKPVPHL 297

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 94.3 bits (235), Expect = 2e-22
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 10/124 (8%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y   + +GTGS+G   + + +  G+I+  K++        +K+    E+ +++ L HPNI
Sbjct: 8   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           V          D+    L +V+EY     +  +    ++  Q +   +V     Q+  AL
Sbjct: 68  VRYYDRII---DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124

Query: 197 AYIH 200
              H
Sbjct: 125 KECH 128

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 95.1 bits (237), Expect = 2e-22
 Identities = 30/137 (21%), Positives = 50/137 (36%), Gaps = 16/137 (11%)

Query: 70  TIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRE 125
            I  ++        Y+    +G G F  V   +    G   A+K++L    QD+    RE
Sbjct: 25  IIDNKH--------YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQRE 76

Query: 126 LQIMQMLDHPNIVALKHCFF-STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLI 183
             + ++ +HPNI+ L          K E +  L+L +    T+             +   
Sbjct: 77  ADMHRLFNHPNILRLVAYCLRERGAKHEAW--LLLPFFKRGTLWNEIERLKDKGNFLTED 134

Query: 184 YVKLYTYQICRALAYIH 200
            +      ICR L  IH
Sbjct: 135 QILWLLLGICRGLEAIH 151

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 95.7 bits (238), Expect = 2e-22
 Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 13/129 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKNRELQIMQMLDHPNIV 138
           ++   ++G G+   VF+ + ++TG++ AIK       L+    + RE ++++ L+H NIV
Sbjct: 11  WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
            L      TT +      L++E+ P       +    +     +P     +    +   +
Sbjct: 71  KLFAIEEETTTR-HKV--LIMEFCPCGSLYTVLEEPSN--AYGLPESEFLIVLRDVVGGM 125

Query: 197 AYIH-NCIV 204
            ++  N IV
Sbjct: 126 NHLRENGIV 134

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 94.3 bits (235), Expect = 3e-22
 Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 13/126 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPN 136
           +  E  +G G F  V++A C   G  VA+KKV        + +    +E+ +++ L+HPN
Sbjct: 34  FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           ++     F      E+  LN+VLE      ++R+ +++ +  + +P   V  Y  Q+C A
Sbjct: 94  VIKYYASF-----IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148

Query: 196 LAYIHN 201
           L ++H+
Sbjct: 149 LEHMHS 154

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 93.7 bits (234), Expect = 3e-22
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++G VF+AK RET EIVA+K+V  D   +       RE+ +++ L H NIV L   
Sbjct: 10  IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                  ++L   LV E+  + + +   + +     +    VK + +Q+ + L + H
Sbjct: 70  L---HSDKKLT--LVFEFCDQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCH 118

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 6/87 (6%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            DQL  I ++LGTPT E    +  + P+Y  +            V   +L     DL+  
Sbjct: 209 DDQLKRIFRLLGTPTEEQWPSMTKL-PDYKPYPMYP-ATTSLVNVV-PKLNATGRDLLQN 265

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDP 287
             + +P  R +A EA  HP+F +   P
Sbjct: 266 LLKCNPVQRISAEEALQHPYFSDFCPP 292

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 93.6 bits (233), Expect = 3e-22
 Identities = 49/263 (18%), Positives = 90/263 (34%), Gaps = 75/263 (28%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKH 142
            +G GSF  V++    ET   VA  ++   K  K+       E ++++ L HPNIV    
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
            + ST   ++  + LV E +   T+    + Y +  + M +  ++ +  QI + L ++H 
Sbjct: 93  SWESTVKGKK-CIVLVTELMTSGTL----KTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147

Query: 201 -------------NCIVDQLVEIIK-----------------VLGTP------------- 217
                        N  +      +K                 V+GTP             
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYD 207

Query: 218 ----------TREEIKCMNPNYTE-------FKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
                        E+      Y+E       ++       P    F K   PE  +++  
Sbjct: 208 ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVKEIIEG 265

Query: 261 FFQYSPNLRCTALEACVHPFFDE 283
             + + + R +  +   H FF E
Sbjct: 266 CIRQNKDERYSIKDLLNHAFFQE 288

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 93.1 bits (232), Expect = 4e-22
 Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 16/138 (11%)

Query: 77  NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPN 136
           + +  + +    ++G+G FG VF+AK R  G+   IK+V  +     RE++ +  LDH N
Sbjct: 6   DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVN 65

Query: 137 IVALKHCF-----------FSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLI 183
           IV    C+            +++  +   L + +E+         I +   R  +++  +
Sbjct: 66  IVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK---RRGEKLDKV 122

Query: 184 YVKLYTYQICRALAYIHN 201
                  QI + + YIH+
Sbjct: 123 LALELFEQITKGVDYIHS 140

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 93.5 bits (233), Expect = 6e-22
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 13/120 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKNRELQIMQML-DHPNIVAL 140
           Y     +G G +  VF+A      E V +K +  ++ K+ K RE++I++ L   PNI+ L
Sbjct: 38  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIK-REIKILENLRGGPNIITL 96

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                    +       V E+V  T      ++ +++Q +    ++ Y Y+I +AL Y H
Sbjct: 97  ADIVKDPVSRTPAL---VFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDYCH 147

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 79.2 bits (196), Expect = 7e-17
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 204 VDQLVEIIKVLGTPTREEI--KCMNPNYTEFK--FPQIKPHPWHKVF----QKRLPPEAV 255
            DQLV I KVLGT    +   K        F     +     W +      Q  + PEA+
Sbjct: 238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEAL 297

Query: 256 DLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
           D + +  +Y    R TA EA  HP+F  +   
Sbjct: 298 DFLDKLLRYDHQSRLTAREAMEHPYFYTVVKD 329

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 93.0 bits (232), Expect = 8e-22
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 15/128 (11%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQML---DHPNI 137
           +G G++G V++A+   +G  VA+K V                 RE+ +++ L   +HPN+
Sbjct: 17  IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L     ++    E+ + LV E+V + +             +P   +K    Q  R L 
Sbjct: 77  VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLD 134

Query: 198 YIH-NCIV 204
           ++H NCIV
Sbjct: 135 FLHANCIV 142

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 77.6 bits (192), Expect = 2e-16
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 9/88 (10%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTE---FKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            DQL +I  ++G P  ++     P         FP   P P   V    +      L+  
Sbjct: 225 ADQLGKIFDLIGLPPEDDW----PRDVSLPRGAFPPRGPRPVQSVV-PEMEESGAQLLLE 279

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
              ++P+ R +A  A  H +  +  + N
Sbjct: 280 MLTFNPHKRISAFRALQHSYLHKD-EGN 306

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 92.4 bits (230), Expect = 8e-22
 Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 13/138 (9%)

Query: 72  GGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNRELQ- 127
           G     S+    +     +G+G FG VF+   R  G I AIK+    L     +   L+ 
Sbjct: 1   GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALRE 60

Query: 128 ---IMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLI 183
                 +  H ++V     +      E+ ++ +  EY    ++        RI       
Sbjct: 61  VYAHAVLGQHSHVVRYFSAWA-----EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEA 115

Query: 184 YVKLYTYQICRALAYIHN 201
            +K    Q+ R L YIH+
Sbjct: 116 ELKDLLLQVGRGLRYIHS 133

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 92.3 bits (230), Expect = 2e-21
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++G V++A    T E VAIK++  +   +       RE+ +++ L H NI+ LK  
Sbjct: 42  LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                    L+  L+ EY    + +        +  + +  +K + YQ+   + + H
Sbjct: 102 I---HHNHRLH--LIFEYAENDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCH 149

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 82.3 bits (204), Expect = 5e-18
 Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 16/99 (16%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL +I +VLG P       +  + P++ +  FP+ +     +V    L  E +DL+  
Sbjct: 244 IDQLFKIFEVLGLPDDTTWPGVTAL-PDWKQS-FPKFRGKTLKRVLGALLDDEGLDLLTA 301

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP 299
             +  P  R +A  A  HP+F                 P
Sbjct: 302 MLEMDPVKRISAKNALEHPYFSHN-----------DFDP 329

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 91.6 bits (228), Expect = 2e-21
 Identities = 51/275 (18%), Positives = 91/275 (33%), Gaps = 81/275 (29%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN---RELQIMQMLDHPNIVALKHCF 144
           V+G G++G+V+  +       +AIK++  +D RY      E+ + + L H NIV      
Sbjct: 29  VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ----- 83

Query: 145 FSTTDKEELYLNLVLEYVPE-TVNRIARN-YSRIHQRMPLIYVKLYTYQICRALAYIH-- 200
           +  +  E  ++ + +E VP  +++ + R+ +  +      I    YT QI   L Y+H  
Sbjct: 84  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTI--GFYTKQILEGLKYLHDN 141

Query: 201 ----------NCIVDQLVEIIK-------------------VLGTP---TREEIKCMNPN 228
                     N +++    ++K                     GT      E I      
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRG 201

Query: 229 YTE-------------------------------FKFPQIKPHPWHKVFQKRLPPEAVDL 257
           Y +                               FK    K HP      + +  EA   
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP---EIPESMSAEAKAF 258

Query: 258 VCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLP 292
           + + F+  P+ R  A +  V  F           P
Sbjct: 259 ILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQP 293

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 91.9 bits (229), Expect = 2e-21
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 21/127 (16%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLD 133
           +YI    +G G++  V++ K + T  +VA+K++    R ++         RE+ +++ L 
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI----RLEHEEGAPCTAIREVSLLKDLK 58

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           H NIV L         ++ L   LV EY+ + + +   +       + +  VKL+ +Q+ 
Sbjct: 59  HANIVTLHDII---HTEKSLT--LVFEYLDKDLKQYLDDCG---NIINMHNVKLFLFQLL 110

Query: 194 RALAYIH 200
           R LAY H
Sbjct: 111 RGLAYCH 117

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 91.1 bits (227), Expect = 4e-21
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            +QL  I ++LGTPT E    I      +  + +P+ +          RL  +  DL+ +
Sbjct: 207 EEQLHFIFRILGTPTEETWPGILSN-EEFKTYNYPKYRAEALLSHA-PRLDSDGADLLTK 264

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK 304
             Q+    R +A +A  HPFF  L +   +LP+   +  L   +
Sbjct: 265 LLQFEGRNRISAEDAMKHPFFLSLGERIHKLPDTTSIFALKEIQ 308

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 20/122 (16%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVAL 140
           +G G++  V++   + TG  VA+K+V    +  +         RE+ +M+ L H NIV L
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEV----KLDSEEGTPSTAIREISLMKELKHENIVRL 68

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRI--ARNYSRIHQRMPLIYVKLYTYQICRALAY 198
                    + +L   LV E++   + +   +R      + + L  VK + +Q+ + LA+
Sbjct: 69  YDVI---HTENKLT--LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123

Query: 199 IH 200
            H
Sbjct: 124 CH 125

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 76.9 bits (190), Expect = 4e-16
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQK----RLPPEAVD 256
            +QL  I  ++GTP       +  + P Y      Q  P    +V Q      L    +D
Sbjct: 215 EEQLKLIFDIMGTPNESLWPSVTKL-PKY-NPNIQQRPPRDLRQVLQPHTKEPLDGNLMD 272

Query: 257 LVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP 299
            +    Q +P++R +A +A  HP+F E       +   R    
Sbjct: 273 FLHGLLQLNPDMRLSAKQALHHPWFAEYYHH-ASMGGSRSHHH 314

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 92.6 bits (230), Expect = 4e-21
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 22/129 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KR-YKNRELQIMQMLDHP 135
           Y   H++GTGS+G V +A  +    +VAIKK+L+        KR    RE+ I+  L+H 
Sbjct: 55  YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL--REIAILNRLNHD 112

Query: 136 NIVALKHCFF--STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL--IYVKLYTYQ 191
           ++V +            +ELY  +VLE       ++          + L  +++K   Y 
Sbjct: 113 HVVKVLDIVIPKDVEKFDELY--VVLEIADSDFKKL------FRTPVYLTELHIKTLLYN 164

Query: 192 ICRALAYIH 200
           +   + Y+H
Sbjct: 165 LLVGVKYVH 173

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 9/133 (6%)

Query: 164 ETVNRIARNYSRIHQRMPL-----IYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPT 218
           E +N I  N +    R PL      +      +      +      DQL  I  +LGTP+
Sbjct: 276 ELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPS 335

Query: 219 REEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEA 275
            E+I+ +   +   +   FP+ +     + F      +A+ L+ R   ++PN R T  E 
Sbjct: 336 EEDIEALEKEDAKRYIRIFPKREGTDLAERF-PASSADAIHLLKRMLVFNPNKRITINEC 394

Query: 276 CVHPFFDELRDPN 288
             HPFF E+R   
Sbjct: 395 LAHPFFKEVRIAE 407

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 90.3 bits (225), Expect = 6e-21
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKN---RELQIMQMLDHPN 136
           Y+    +G G F   F+    +T E+ A K     +L     +     E+ I + L H +
Sbjct: 17  YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 76

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           +V     F    D + ++  +VLE       +    R      + +     + Y  QI  
Sbjct: 77  VVGFHGFF---EDNDFVF--VVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVL 126

Query: 195 ALAYIHN 201
              Y+H 
Sbjct: 127 GCQYLHR 133

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 92.1 bits (229), Expect = 6e-21
 Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQD-KR-YKNRELQIMQMLDHP 135
           YI +H++G GS+G V+ A  + T + VAIKKV      L D KR    RE+ I+  L   
Sbjct: 28  YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL--REITILNRLKSD 85

Query: 136 NIVALKHCFF--STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL--IYVKLYTYQ 191
            I+ L            +ELY  +VLE     + ++          + L   ++K   Y 
Sbjct: 86  YIIRLYDLIIPDDLLKFDELY--IVLEIADSDLKKL------FKTPIFLTEEHIKTILYN 137

Query: 192 ICRALAYIH 200
           +     +IH
Sbjct: 138 LLLGENFIH 146

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 83.3 bits (206), Expect = 5e-18
 Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 4/88 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            DQL  I  ++GTPT +++K +  P   ++   FP  KP    + +   +  + ++L+  
Sbjct: 286 RDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKY-PSISDDGINLLES 344

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
             +++PN R T  +A  HP+  ++R   
Sbjct: 345 MLKFNPNKRITIDQALDHPYLKDVRKKK 372

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 89.6 bits (223), Expect = 7e-21
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 19/119 (15%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYK--NRELQIMQMLDHPNIVALKHC 143
           G G FG V+ A+ +++  I+A+K     ++ +        RE++I   L HPNI+ L   
Sbjct: 18  GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77

Query: 144 FFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           F    D   +Y  L+LEY P       + +       +        Y  ++  AL+Y H
Sbjct: 78  FH---DATRVY--LILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCH 126

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 92.4 bits (229), Expect = 8e-21
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 13/144 (9%)

Query: 72  GGRNGNSKQKV--SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----R 124
           GGR+ +   +    +  +  +GTG FG V +   ++TGE VAIK+  Q+   KN      
Sbjct: 2   GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL 61

Query: 125 ELQIMQMLDHPNIVALKHCFFSTTDKEELYLN-LVLEYVP--ETVNRIARNYSRIHQRMP 181
           E+QIM+ L+HPN+V+ +             L  L +EY    +    + +        + 
Sbjct: 62  EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLK 119

Query: 182 LIYVKLYTYQICRALAYIH-NCIV 204
              ++     I  AL Y+H N I+
Sbjct: 120 EGPIRTLLSDISSALRYLHENRII 143

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 90.1 bits (224), Expect = 1e-20
 Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKN---RELQIMQMLDHPN 136
           Y+    +G G F   F+    +T E+ A K     +L     +     E+ I + L H +
Sbjct: 43  YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQH 102

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           +V     F    D + ++  +VLE       +    R      + +     + Y  QI  
Sbjct: 103 VVGFHGFF---EDNDFVF--VVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVL 152

Query: 195 ALAYIHN 201
              Y+H 
Sbjct: 153 GCQYLHR 159

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 89.6 bits (223), Expect = 2e-20
 Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 15/143 (10%)

Query: 74  RNGNSKQKVSYIAEHVVGTGSFGVVFQAK-CRETGEIVAIKKVLQDKRYKN-------RE 125
           ++G  +    Y     +G G++G VF+A+  +  G  VA+K+V      +        RE
Sbjct: 3   KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIRE 61

Query: 126 LQIMQML---DHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL 182
           + +++ L   +HPN+V L      +    E  L LV E+V + +             +P 
Sbjct: 62  VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119

Query: 183 IYVKLYTYQICRALAYIH-NCIV 204
             +K   +Q+ R L ++H + +V
Sbjct: 120 ETIKDMMFQLLRGLDFLHSHRVV 142

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 81.9 bits (203), Expect = 8e-18
 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 10/99 (10%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTE---FKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           VDQL +I+ V+G P  E+     P         F      P  K     +     DL+ +
Sbjct: 225 VDQLGKILDVIGLPGEEDW----PRDVALPRQAFHSKSAQPIEKFV-TDIDELGKDLLLK 279

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP 299
              ++P  R +A  A  HP+F +L      L +   LPP
Sbjct: 280 CLTFNPAKRISAYSALSHPYFQDLERCKENLDS--HLPP 316

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 17/138 (12%)

Query: 77  NSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLD 133
           + +    +    V+G G+FG V +A+        AIKK+   +   +    E+ ++  L+
Sbjct: 1   SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60

Query: 134 HPNIVALKHCF--------FSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLI 183
           H  +V     +          T  K++  L + +EY       + I        +     
Sbjct: 61  HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120

Query: 184 YVKLYTYQICRALAYIHN 201
             +    QI  AL+YIH+
Sbjct: 121 LFR----QILEALSYIHS 134

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 88.0 bits (219), Expect = 3e-20
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 19/122 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYK--NRELQIMQMLDHPNIVALK 141
            +G G FG V+ A+ ++   I+A+K     ++ ++       RE++I   L HPNI+ + 
Sbjct: 21  PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           + F    D++ +Y  L+LE+ P  E    + +     H R        +  ++  AL Y 
Sbjct: 81  NYFH---DRKRIY--LMLEFAPRGELYKELQK-----HGRFDEQRSATFMEELADALHYC 130

Query: 200 HN 201
           H 
Sbjct: 131 HE 132

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 88.0 bits (219), Expect = 4e-20
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 15/117 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G++GVV++A+    GE  A+KK+  +K  +       RE+ I++ L H NIV L   
Sbjct: 10  IGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                 K+ L   LV E++ + + ++          +  +  K +  Q+   +AY H
Sbjct: 69  I---HTKKRLV--LVFEHLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCH 117

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 80.6 bits (200), Expect = 1e-17
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            DQL+ I ++LGTP  +    +  + P Y +  F   +P PW     K L    +DL+ +
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTEL-PKY-DPNFTVYEPLPWESFL-KGLDESGIDLLSK 263

Query: 261 FFQYSPNLRCTALEACVHPFFDEL 284
             +  PN R TA +A  H +F E 
Sbjct: 264 MLKLDPNQRITAKQALEHAYFKEN 287

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 88.4 bits (220), Expect = 5e-20
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 12/121 (9%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           +G G+FG VF+A+ R+TG+ VA+KKVL +   +       RE++I+Q+L H N+V L   
Sbjct: 25  IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84

Query: 144 FFSTTDKEELYLN---LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             +             LV ++    +  +  N   +  +  L  +K     +   L YIH
Sbjct: 85  CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIH 141

Query: 201 N 201
            
Sbjct: 142 R 142

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQK-RLPPEAVDLVC 259
             QL  I ++ G+ T E    +      Y + +  + +        +     P A+DL+ 
Sbjct: 235 QHQLALISQLCGSITPEVWPNVDNY-ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPP 299
           +     P  R  + +A  H FF    DP      G     
Sbjct: 294 KLLVLDPAQRIDSDDALNHDFFWS--DPMPSDLKGMLSTH 331

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 88.2 bits (219), Expect = 6e-20
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 16/126 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y+    +G GSFG     K  E G    IK++       +++    RE+ ++  + HPNI
Sbjct: 26  YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           V  +  F     +E   L +V++Y    +   RI     +         +  +  QIC A
Sbjct: 86  VQYRESF-----EENGSLYIVMDYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLA 137

Query: 196 LAYIHN 201
           L ++H+
Sbjct: 138 LKHVHD 143

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 87.6 bits (218), Expect = 6e-20
 Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 15/117 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVALKHC 143
           VG G++GVV++AK    G IVA+K++  D   +       RE+ +++ L HPNIV+L   
Sbjct: 29  VGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                 +  L   LV E++ + + ++          +    +K+Y YQ+ R +A+ H
Sbjct: 88  I---HSERCLT--LVFEFMEKDLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCH 136

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 85.3 bits (212), Expect = 3e-19
 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 204 VDQLVEIIKVLGTPTRE---EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
            DQL +I  +LGTP      +++ + P + +  F   +  PW  +       E +DL+  
Sbjct: 226 DDQLPKIFSILGTPNPREWPQVQEL-PLWKQRTFQVFEKKPWSSII-PGFCQEGIDLLSN 283

Query: 261 FFQYSPNLRCTALEACVHPFFDEL 284
              + PN R +A +A  HP+F +L
Sbjct: 284 MLCFDPNKRISARDAMNHPYFKDL 307

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 88.1 bits (219), Expect = 7e-20
 Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 18/126 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-----LQD-KR-YKNRELQIMQMLDHPN 136
           +  + ++G G++GVV  A  + TGEIVAIKK+          R    RE++I++   H N
Sbjct: 13  FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70

Query: 137 IVALKHCFFSTTDKE--ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           I+ + +     + +   E+Y  ++ E +   ++R+        Q +   +++ + YQ  R
Sbjct: 71  IITIFNIQRPDSFENFNEVY--IIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLR 123

Query: 195 ALAYIH 200
           A+  +H
Sbjct: 124 AVKVLH 129

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 81.9 bits (203), Expect = 8e-18
 Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 8/122 (6%)

Query: 204 VDQLVEIIKVLGTPTREEI--KCMNPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVC 259
             QL+ I  ++GTP  +       +P   E+    P     P  K+F + + P+ +DL+ 
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPR-VNPKGIDLLQ 287

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPL-FNFKPPELSGIPPETINR 318
           R   + P  R TA EA  HP+     DPN   P G P+PP  F F       +  + + +
Sbjct: 288 RMLVFDPAKRITAKEALEHPYLQTYHDPN-DEPEGEPIPPSFFEFD-HYKEALTTKDLKK 345

Query: 319 LI 320
           LI
Sbjct: 346 LI 347

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 87.9 bits (218), Expect = 7e-20
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 13/120 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKNRELQIMQMLDHPNIVALKH 142
              +  VG GSFG V + K ++TG   A+KKV L+   ++  EL     L  P IV L  
Sbjct: 60  MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV--FRVEELVACAGLSSPRIVPLYG 117

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
                  +E  ++N+ +E +   ++ ++ +        +P      Y  Q    L Y+H 
Sbjct: 118 AV-----REGPWVNIFMELLEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHT 168

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 86.9 bits (216), Expect = 7e-20
 Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 15/146 (10%)

Query: 65  HVIRTTIGGRNGNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQ 117
           H    + G  N   +  +   +I +  +G+G+FG V   + R +G    IK     +   
Sbjct: 3   HHHHHSSGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV 62

Query: 118 DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSR 175
                  E+++++ LDHPNI+ +   F    D   +Y  +V+E     E + RI    +R
Sbjct: 63  PMEQIEAEIEVLKSLDHPNIIKIFEVF---EDYHNMY--IVMETCEGGELLERIVSAQAR 117

Query: 176 IHQRMPLIYVKLYTYQICRALAYIHN 201
             + +   YV     Q+  ALAY H+
Sbjct: 118 -GKALSEGYVAELMKQMMNALAYFHS 142

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 87.0 bits (216), Expect = 9e-20
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 14/131 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL-----QDKRYKNRELQIMQMLDHPNIV 138
           +     +G G FGVVF+AK +      AIK++        +    RE++ +  L+HP IV
Sbjct: 7   FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66

Query: 139 ALKHCFF-------STTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTY 190
              + +              ++YL + ++    E +         I +R           
Sbjct: 67  RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEER-ERSVCLHIFL 125

Query: 191 QICRALAYIHN 201
           QI  A+ ++H+
Sbjct: 126 QIAEAVEFLHS 136

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 87.9 bits (218), Expect = 1e-19
 Identities = 42/167 (25%), Positives = 64/167 (38%), Gaps = 19/167 (11%)

Query: 41  DQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQ 100
            +V    D     D            +   +  + G+      Y     +G+G+FGVV +
Sbjct: 12  SKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDY--YDILEELGSGAFGVVHR 69

Query: 101 AKCRETGEIVAIK----KVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN 156
              + TG +   K        DK     E+ IM  L HP ++ L   F    DK E+   
Sbjct: 70  CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF---EDKYEMV-- 124

Query: 157 LVLEYVP--ETVNRI-ARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           L+LE++   E  +RI A +Y      M    V  Y  Q C  L ++H
Sbjct: 125 LILEFLSGGELFDRIAAEDYK-----MSEAEVINYMRQACEGLKHMH 166

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 86.6 bits (215), Expect = 1e-19
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 26/134 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQD----KR-YKNRELQIMQMLDHPNI 137
           Y+    +G G  G+VF A   +  + VAIKK+ L D    K     RE++I++ LDH NI
Sbjct: 13  YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL--REIKIIRRLDHDNI 70

Query: 138 VALKHCF-----------FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVK 186
           V +                S T+   +Y  +V EY+   +  +          +   + +
Sbjct: 71  VKVFEILGPSGSQLTDDVGSLTELNSVY--IVQEYMETDLANVLE-----QGPLLEEHAR 123

Query: 187 LYTYQICRALAYIH 200
           L+ YQ+ R L YIH
Sbjct: 124 LFMYQLLRGLKYIH 137

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 83.1 bits (206), Expect = 3e-18
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCRF 261
           ++Q+  I++ +     E+ + +      +          P  ++    +  EAVD + + 
Sbjct: 231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG-ISREAVDFLEQI 289

Query: 262 FQYSPNLRCTALEACVHPFFDELRDPN 288
             +SP  R TA EA  HP+      P 
Sbjct: 290 LTFSPMDRLTAEEALSHPYMSIYSFPM 316

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 26/151 (17%)

Query: 59  VGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV--- 115
           +G E  +    ++ GR         Y     +G+G    VFQ    E  +I AIK V   
Sbjct: 13  LGTENLYFQSMSVKGRI--------YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLE 63

Query: 116 -LQDKRYKN--RELQIMQMLDHPN--IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIA 170
              ++   +   E+  +  L   +  I+ L          + +Y+  V+E     +N   
Sbjct: 64  EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE---ITDQYIYM--VMECGNIDLNSWL 118

Query: 171 RNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           +      + +     K Y   +  A+  IH 
Sbjct: 119 KK----KKSIDPWERKSYWKNMLEAVHTIHQ 145

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 13/70 (18%)

Query: 225 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 284
           ++PN+ E +FP I               +  D++    +  P  R +  E   HP+    
Sbjct: 253 IDPNH-EIEFPDI------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299

Query: 285 RDPNTRLPNG 294
             P  ++  G
Sbjct: 300 THPVNQMAKG 309

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 87.1 bits (216), Expect = 2e-19
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 17/141 (12%)

Query: 71  IGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNREL 126
           +  + G      +     ++G G FG V + +   TG  +A K    + ++DK     E+
Sbjct: 78  VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137

Query: 127 QIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRI-ARNYSRIHQRMPLI 183
            +M  LDH N++ L   F     K ++   LV+EYV   E  +RI   +Y+     +  +
Sbjct: 138 SVMNQLDHANLIQLYDAF---ESKNDIV--LVMEYVDGGELFDRIIDESYN-----LTEL 187

Query: 184 YVKLYTYQICRALAYIHNCIV 204
              L+  QIC  + ++H   +
Sbjct: 188 DTILFMKQICEGIRHMHQMYI 208

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 87.4 bits (217), Expect = 2e-19
 Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 25/132 (18%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------------RELQIMQM 131
           YI    +G+G+ G V  A  R+T + VAI+ + + K                 E++I++ 
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196

Query: 132 LDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYT 189
           L+HP I+ +K+ F    D E+ Y  +VLE +   E  +++       ++R+     KLY 
Sbjct: 197 LNHPCIIKIKNFF----DAEDYY--IVLELMEGGELFDKVVG-----NKRLKEATCKLYF 245

Query: 190 YQICRALAYIHN 201
           YQ+  A+ Y+H 
Sbjct: 246 YQMLLAVQYLHE 257

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 85.3 bits (212), Expect = 2e-19
 Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 22/136 (16%)

Query: 76  GNSKQKVS--YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNRELQIM 129
           G++K  ++  Y  E+ +G GS+G V  A  + T    A K      ++D     +E++IM
Sbjct: 1   GSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60

Query: 130 QMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYV 185
           + LDHPNI+ L   F    D  ++Y  LV+E     E   R+     +            
Sbjct: 61  KSLDHPNIIRLYETF---EDNTDIY--LVMELCTGGELFERVVHKRVFRE-------SDA 108

Query: 186 KLYTYQICRALAYIHN 201
                 +  A+AY H 
Sbjct: 109 ARIMKDVLSAVAYCHK 124

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 86.2 bits (214), Expect = 3e-19
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 17/126 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y++   VG+G++G V  A  + +GE VAIKK+          +   REL +++ + H N+
Sbjct: 26  YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85

Query: 138 VALKHCFFSTTDKE---ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           + L   F   +      + Y  LV+ ++   + +I      +  +     ++   YQ+ +
Sbjct: 86  IGLLDVFTPASSLRNFYDFY--LVMPFMQTDLQKI------MGLKFSEEKIQYLVYQMLK 137

Query: 195 ALAYIH 200
            L YIH
Sbjct: 138 GLKYIH 143

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 79.6 bits (197), Expect = 6e-17
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL +I+KV G P  E ++ + +     +    PQ     + ++F  R  P+A DL+ +
Sbjct: 230 LDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEK 288

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
             +   + R TA +A  HPFF+  RDP 
Sbjct: 289 MLELDVDKRLTAAQALTHPFFEPFRDPE 316

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 86.0 bits (213), Expect = 4e-19
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 18/132 (13%)

Query: 78  SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQM 131
           S +   Y     +G+G    VFQ    E  +I AIK V  ++           E+  +  
Sbjct: 52  SVKGRIYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNK 110

Query: 132 LDHPN--IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYT 189
           L   +  I+ L          + +Y+  V+E     +N   +      + +     K Y 
Sbjct: 111 LQQHSDKIIRLYDYE---ITDQYIYM--VMECGNIDLNSWLKK----KKSIDPWERKSYW 161

Query: 190 YQICRALAYIHN 201
             +  A+  IH 
Sbjct: 162 KNMLEAVHTIHQ 173

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 13/70 (18%)

Query: 225 MNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL 284
           ++PN+ E +FP I               +  D++    +  P  R +  E   HP+    
Sbjct: 281 IDPNH-EIEFPDI------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327

Query: 285 RDPNTRLPNG 294
             P  ++  G
Sbjct: 328 THPVNQMAKG 337

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 84.5 bits (210), Expect = 5e-19
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 18/119 (15%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALKHC 143
           G GSF  V++A+   TG  VAIK + +   YK         E++I   L HP+I+ L + 
Sbjct: 20  GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY 79

Query: 144 FFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           F    D   +Y  LVLE     E    +        +       + + +QI   + Y+H
Sbjct: 80  F---EDSNYVY--LVLEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLH 129

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 84.9 bits (211), Expect = 6e-19
 Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 21/130 (16%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN----RELQIMQMLDHPNIVA 139
           +I   V+G+G+F  VF  K R TG++ A+K + +   +++     E+ +++ + H NIV 
Sbjct: 11  FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVT 70

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQICRA 195
           L+  +         Y  LV++ V   E  +RI     Y+   ++   + ++    Q+  A
Sbjct: 71  LEDIY---ESTTHYY--LVMQLVSGGELFDRILERGVYT---EKDASLVIQ----QVLSA 118

Query: 196 LAYIH-NCIV 204
           + Y+H N IV
Sbjct: 119 VKYLHENGIV 128

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 86.8 bits (215), Expect = 6e-19
 Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 15/125 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIMQMLDHPNIVA 139
           Y     +GTG+FGVV +   R TG   A K V      DK    +E+Q M +L HP +V 
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           L   F    D  E+   ++ E++   E   ++A  ++++ +   + Y++    Q+C+ L 
Sbjct: 219 LHDAF---EDDNEMV--MIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLC 269

Query: 198 YIHNC 202
           ++H  
Sbjct: 270 HMHEN 274

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 85.1 bits (211), Expect = 6e-19
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 18/126 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPN- 136
           Y     +G+G    VFQ    E  +I AIK V  ++           E+  +  L   + 
Sbjct: 11  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69

Query: 137 -IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
            I+ L          + +Y+  V+E     +N   +      + +     K Y   +  A
Sbjct: 70  KIIRLYDYE---ITDQYIYM--VMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEA 120

Query: 196 LAYIHN 201
           +  IH 
Sbjct: 121 VHTIHQ 126

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 13/72 (18%)

Query: 223 KCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFD 282
             ++PN+ E +FP I               +  D++    +  P  R +  E   HP+  
Sbjct: 232 AIIDPNH-EIEFPDI------------PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278

Query: 283 ELRDPNTRLPNG 294
               P  ++  G
Sbjct: 279 IQTHPVNQMAKG 290

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 83.9 bits (208), Expect = 1e-18
 Identities = 48/279 (17%), Positives = 84/279 (30%), Gaps = 65/279 (23%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQ-MLDHPNIVALKH 142
            +   V+G G  G V Q   + T E  A+ K+LQD     RE+++       P+IV +  
Sbjct: 20  KVTSQVLGLGINGKVLQIFNKRTQEKFAL-KMLQDCPKARREVELHWRASQCPHIVRIVD 78

Query: 143 CFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             +         L +V+E +   E  +RI     R  Q             I  A+ Y+H
Sbjct: 79  -VYENLYAGRKCLLIVMECLDGGELFSRIQ---DRGDQAFTEREASEIMKSIGEAIQYLH 134

Query: 201 NC-IV----------------DQLVEII------KVLGTPTREEIKC------------- 224
           +  I                 + ++++       +  G    +                 
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCG 194

Query: 225 ------MNPNYTEFK-FPQIK-------PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRC 270
                  +          +I+          W +V       E   L+    +  P  R 
Sbjct: 195 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV-----SEEVKMLIRNLLKTEPTQRM 249

Query: 271 TALEACVHPFFDELRD-PNTRLPNGRPLPPLFNFKPPEL 308
           T  E   HP+  +    P T L   R L      +  ++
Sbjct: 250 TITEFMNHPWIMQSTKVPQTPLHTSRVL-KEDKERWEDV 287

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 24/128 (18%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVA---IKKVLQDKRYKNRELQIMQMLDHPNIVAL 140
           Y+    +G G FG+V +     + +      +K    D+    +E+ I+ +  H NI+ L
Sbjct: 7   YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRI-ARNYSRIHQRMPLIY----VKLYTYQIC 193
              F      EEL   ++ E++   +   RI    +               +  Y +Q+C
Sbjct: 67  HESF---ESMEELV--MIFEFISGLDIFERINTSAFE---------LNEREIVSYVHQVC 112

Query: 194 RALAYIHN 201
            AL ++H+
Sbjct: 113 EALQFLHS 120

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 84.4 bits (209), Expect = 2e-18
 Identities = 33/126 (26%), Positives = 67/126 (53%), Gaps = 19/126 (15%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL---QD----KR-YKNRELQIMQ-MLDH 134
           Y     +G G++G+V+++  R TGE+VA+KK+    Q+    +R +  RE+ I+  +  H
Sbjct: 11  YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--REIMILTELSGH 68

Query: 135 PNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
            NIV L +   +  D+ ++Y  LV +Y+   ++ + R        +  ++ +   YQ+ +
Sbjct: 69  ENIVNLLNVLRADNDR-DVY--LVFDYMETDLHAVIRA-----NILEPVHKQYVVYQLIK 120

Query: 195 ALAYIH 200
            + Y+H
Sbjct: 121 VIKYLH 126

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 72.8 bits (179), Expect = 2e-14
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 22/135 (16%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLP--------- 251
           ++QL  II V+  P+ E+++ + +P          +                        
Sbjct: 237 MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKIN 296

Query: 252 ------PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKP 305
                  EA+DL+ +  Q++PN R +A +A  HPF     +PN           +     
Sbjct: 297 PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN----EEPNCDHIITIPI 352

Query: 306 PELSGIPPETINRLI 320
            +      +    L+
Sbjct: 353 NDNVKHSIDDYRNLV 367

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 84.3 bits (209), Expect = 2e-18
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 16/126 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y     VG+G++G V  A    TG  VAIKK+          +   REL++++ + H N+
Sbjct: 27  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86

Query: 138 VALKHCFF---STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           + L   F    +  D  + Y  LV+ ++   + ++ ++     +++    ++   YQ+ +
Sbjct: 87  IGLLDVFTPDETLDDFTDFY--LVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLK 139

Query: 195 ALAYIH 200
            L YIH
Sbjct: 140 GLRYIH 145

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 78.9 bits (195), Expect = 1e-16
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL EI+KV GTP  E ++ + +     +    P+++   +  +      P AV+L+ +
Sbjct: 232 LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASIL-TNASPLAVNLLEK 290

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
                   R TA EA  HP+F+ L D  
Sbjct: 291 MLVLDAEQRVTAGEALAHPYFESLHDTE 318

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 14/128 (10%)

Query: 81  KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQMLD-HPNIV 138
           K+S+  + V+G G+ G +   +       VA+K++L +   + +RE+Q+++  D HPN++
Sbjct: 23  KISFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVI 81

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
                      K+  +  + +E         + +         P+  ++    Q    LA
Sbjct: 82  RYFCTE-----KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ----QTTSGLA 132

Query: 198 YIHNC-IV 204
           ++H+  IV
Sbjct: 133 HLHSLNIV 140

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 40.1 bits (94), Expect = 7e-04
 Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 10/67 (14%)

Query: 215 GTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALE 274
           G   + +   +            + H             A +L+ +     P  R +A  
Sbjct: 231 GKSLQRQANILLGAC-SLDCLHPEKH---------EDVIARELIEKMIAMDPQKRPSAKH 280

Query: 275 ACVHPFF 281
              HPFF
Sbjct: 281 VLKHPFF 287

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 84.5 bits (209), Expect = 2e-18
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 12/136 (8%)

Query: 75  NGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQMLD 133
           N     K   ++E ++G GS G V   +    G  VA+K++L D       E++++   D
Sbjct: 8   NFEQSLKNLVVSEKILGYGSSGTVV-FQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD 66

Query: 134 -HPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARN--YSRIHQRMPLIYVKLYT 189
            HPN++   +C  +      LY  + LE       + +          +           
Sbjct: 67  DHPNVIRY-YCSET--TDRFLY--IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121

Query: 190 YQICRALAYIH-NCIV 204
            QI   +A++H   I+
Sbjct: 122 RQIASGVAHLHSLKII 137

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 5/51 (9%)

Query: 231 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 281
            F   ++K      +       EA DL+ +   + P  R TA++   HP F
Sbjct: 254 IFSLDEMKCLHDRSL-----IAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 83.6 bits (207), Expect = 3e-18
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 17/126 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y     +G+G+ G+V  A        VAIKK+          +   REL +M+ ++H NI
Sbjct: 27  YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86

Query: 138 VALKHCFFSTTDKE---ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           + L + F      E   ++Y  +V+E +   + ++      I   +    +    YQ+  
Sbjct: 87  IGLLNVFTPQKSLEEFQDVY--IVMELMDANLCQV------IQMELDHERMSYLLYQMLC 138

Query: 195 ALAYIH 200
            + ++H
Sbjct: 139 GIKHLH 144

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 82.8 bits (205), Expect = 5e-18
 Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 14/119 (11%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF--KFPQIKPHPWHKVFQ-----------KRL 250
           +DQ  ++I+ LGTP  E +K + P    +    P+   + + K+F            K  
Sbjct: 232 IDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLK 291

Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELS 309
             +A DL+ +      + R +  EA  HP+ +   DP+       P  P       E +
Sbjct: 292 ASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS-EAEAPPPKIPDKQLDEREHT 349

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 83.5 bits (207), Expect = 3e-18
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 27/136 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------------RELQI 128
           Y  +  + +GS+G V        G  VAIK+V                       RE+++
Sbjct: 24  YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82

Query: 129 MQMLDHPNIVALKHCF--FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPL--IY 184
           +    HPNI+ L+  F  F      +LY  LV E +   + ++        QR+ +   +
Sbjct: 83  LNHFHHPNILGLRDIFVHFEEPAMHKLY--LVTELMRTDLAQVIH-----DQRIVISPQH 135

Query: 185 VKLYTYQICRALAYIH 200
           ++ + Y I   L  +H
Sbjct: 136 IQYFMYHILLGLHVLH 151

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 8/110 (7%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NP---NYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
            +QL +I++V+GTP  E++    +P   +Y       +    W  V      P A+DL+ 
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT-ADPVALDLIA 298

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELS 309
           +  +++P  R +  +A  HP+F+ L DP   L  G      F+F      
Sbjct: 299 KMLEFNPQRRISTEQALRHPYFESLFDPL-DLTEGLSER--FHFDESVTD 345

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 83.1 bits (206), Expect = 3e-18
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 26/136 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKN--------RELQIMQM 131
           YI    +G+G+ G V  A  R+T + VAIK    +       +          E++I++ 
Sbjct: 12  YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71

Query: 132 LDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYT 189
           L+HP I+ +K+ F    D E+ Y  +VLE +   E  +++       ++R+     KLY 
Sbjct: 72  LNHPCIIKIKNFF----DAEDYY--IVLELMEGGELFDKVVG-----NKRLKEATCKLYF 120

Query: 190 YQICRALAYIH-NCIV 204
           YQ+  A+ Y+H N I+
Sbjct: 121 YQMLLAVQYLHENGII 136

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 82.3 bits (204), Expect = 4e-18
 Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y    ++G GSFG V + K R T +  A+K + +            RE+++++ LDHPNI
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQIC 193
           + L        D    Y  +V E     E  + I +   +S                Q+ 
Sbjct: 84  MKLFEIL---EDSSSFY--IVGELYTGGELFDEIIKRKRFSE-------HDAARIIKQVF 131

Query: 194 RALAYIHN 201
             + Y+H 
Sbjct: 132 SGITYMHK 139

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 83.1 bits (206), Expect = 4e-18
 Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 18/126 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV--LQD----KR-YKNRELQIMQMLDHPN 136
           Y     +G G++G+V  A        VAIKK+   +     +R    RE++I+    H N
Sbjct: 29  YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL--REIKILLRFRHEN 86

Query: 137 IVALKHCFF--STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           I+ +       +    +++Y  +V + +   + ++ +      Q +   ++  + YQI R
Sbjct: 87  IIGINDIIRAPTIEQMKDVY--IVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILR 139

Query: 195 ALAYIH 200
            L YIH
Sbjct: 140 GLKYIH 145

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 80.0 bits (198), Expect = 4e-17
 Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I+ +LG+P++E++ C+ N     +    P     PW+++F      +A+DL+ +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDK 296

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
              ++P+ R    +A  HP+ ++  DP+
Sbjct: 297 MLTFNPHKRIEVEQALAHPYLEQYYDPS 324

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 82.9 bits (205), Expect = 6e-18
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 12/121 (9%)

Query: 90  VGTGSFGVVFQAKCRE--TGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCFF 145
           VG G++G V++AK ++    +  A+K++       +  RE+ +++ L HPN+++L+  F 
Sbjct: 29  VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88

Query: 146 STTDKEELYLNLVLEYVPETVNRI-----ARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           S  D++   + L+ +Y    +  I     A   ++   ++P   VK   YQI   + Y+H
Sbjct: 89  SHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145

Query: 201 N 201
            
Sbjct: 146 A 146

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 72.9 bits (179), Expect = 2e-14
 Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 11/134 (8%)

Query: 204 VDQLVEIIKVLGTPTRE---------EIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEA 254
            DQL  I  V+G P  +         E   +  ++    +       + +  + +   +A
Sbjct: 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKA 310

Query: 255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPE 314
             L+ +     P  R T+ +A   P+F E  DP             +  +       P +
Sbjct: 311 FHLLQKLLTMDPIKRITSEQAMQDPYFLE--DPLPTSDVFAGCQIPYPKREFLTEEEPDD 368

Query: 315 TINRLIPEHARKQN 328
             ++   +  +  N
Sbjct: 369 KGDKKNQQQQQGNN 382

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 83.4 bits (206), Expect = 6e-18
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 21/128 (16%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KR-YKNRELQIMQMLDHP 135
           Y     +G+G+ G+V  A        VAIKK+ +        KR Y  REL +M+ ++H 
Sbjct: 64  YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 121

Query: 136 NIVALKHCFFSTTDKE---ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQI 192
           NI++L + F      E   ++Y  LV+E +   + ++      I   +    +    YQ+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVY--LVMELMDANLCQV------IQMELDHERMSYLLYQM 173

Query: 193 CRALAYIH 200
              + ++H
Sbjct: 174 LCGIKHLH 181

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 81.0 bits (200), Expect = 3e-17
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 13/98 (13%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF--KFPQIKPHPWHKVF-----------QKRL 250
           +DQ  ++I+ LGTP  E +K + P    +    P+     + K+F            K  
Sbjct: 269 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 328

Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 288
             +A DL+ +     P  R +  +A  HP+ +   DP 
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 366

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 83.2 bits (206), Expect = 7e-18
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 22/128 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL------QDKRYKNRELQIMQMLDHPNI 137
           Y    ++G GSFG V + K R T +  A+K +       +D     RE+++++ LDHPNI
Sbjct: 24  YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQIC 193
           + L        D    Y  +V E     E  + I +   +S                Q+ 
Sbjct: 84  MKLFEIL---EDSSSFY--IVGELYTGGELFDEIIKRKRFSE-------HDAARIIKQVF 131

Query: 194 RALAYIHN 201
             + Y+H 
Sbjct: 132 SGITYMHK 139

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 82.8 bits (205), Expect = 8e-18
 Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 19/127 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN---RELQIMQMLDHPN 136
           Y  + V+G GSFG V   K + TG+  A+K +    ++ K  K    RE+Q+++ LDHPN
Sbjct: 28  YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           I+ L   F     +++ Y  LV E     E  + I        +R   +       Q+  
Sbjct: 88  IMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLS 137

Query: 195 ALAYIHN 201
            + Y+H 
Sbjct: 138 GITYMHK 144

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 81.1 bits (201), Expect = 8e-18
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 30/134 (22%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----------KVLQDKRYKNRELQIMQMLD 133
           Y     +G+G F +V + + + TG+  A K          +    +    RE+ I++ + 
Sbjct: 7   YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIY----VKL 187
           HPNI+ L   F    +K ++   L+LE V   E  + +A   S                 
Sbjct: 67  HPNIITLHDIF---ENKTDVV--LILELVSGGELFDFLAEKES---------LTEDEATQ 112

Query: 188 YTYQICRALAYIHN 201
           +  QI   + Y+H+
Sbjct: 113 FLKQILDGVHYLHS 126

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 30/133 (22%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----------KVLQDKRYKNRELQIMQMLD 133
           Y     +G+G F VV + + + TG   A K          +    +    RE+ I++ + 
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIY----VKL 187
           HPN++ L   +    +K ++   L+LE V   E  + +A   S                 
Sbjct: 73  HPNVITLHEVY---ENKTDVI--LILELVAGGELFDFLAEKES---------LTEEEATE 118

Query: 188 YTYQICRALAYIH 200
           +  QI   + Y+H
Sbjct: 119 FLKQILNGVYYLH 131

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 82.3 bits (204), Expect = 1e-17
 Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 23/132 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     +G G+F VV +      G+  A   +   K          RE +I ++L HPNI
Sbjct: 13  YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQIC 193
           V L       +++   Y  L+ + V   E    I     YS                QI 
Sbjct: 73  VRLHDSI---SEEGHHY--LIFDLVTGGELFEDIVAREYYSE-------ADASHCIQQIL 120

Query: 194 RALAYIH-NCIV 204
            A+ + H   +V
Sbjct: 121 EAVLHCHQMGVV 132

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 81.6 bits (202), Expect = 1e-17
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 20/128 (15%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KR-YKNRELQIMQMLDHP 135
           Y     VG+G++G V  A   +TG  VA+KK+ +        KR Y  REL++++ + H 
Sbjct: 31  YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 88

Query: 136 NIVALKHCFFSTTDKE---ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQI 192
           N++ L   F      E   ++Y  LV   +   +N I +      Q++   +V+   YQI
Sbjct: 89  NVIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQI 141

Query: 193 CRALAYIH 200
            R L YIH
Sbjct: 142 LRGLKYIH 149

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 204 VDQLVEIIKVLGTPTREEIKCM-NPNYTEF--KFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
           +DQL  I++++GTP  E +K + + +   +     Q+    +  VF     P AVDL+ +
Sbjct: 236 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF-IGANPLAVDLLEK 294

Query: 261 FFQYSPNLRCTALEACVHPFFDELRDPN 288
                 + R TA +A  H +F +  DP+
Sbjct: 295 MLVLDSDKRITAAQALAHAYFAQYHDPD 322

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 81.2 bits (201), Expect = 2e-17
 Identities = 38/133 (28%), Positives = 53/133 (39%), Gaps = 25/133 (18%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDH 134
           Y    V+G G F VV +   RETG+  A+K V   K   +         RE  I  ML H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85

Query: 135 PNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIY----VKLY 188
           P+IV L   +   +    LY  +V E++   +    I +           +Y       Y
Sbjct: 86  PHIVELLETY---SSDGMLY--MVFEFMDGADLCFEIVK-----RADAGFVYSEAVASHY 135

Query: 189 TYQICRALAYIHN 201
             QI  AL Y H+
Sbjct: 136 MRQILEALRYCHD 148

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 22/128 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL------QDKRYKNRELQIMQMLDHPNI 137
           Y     +G+G++G V   + + T    AIK +               E+ ++++LDHPNI
Sbjct: 39  YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQIC 193
           + L   F     +++    LV+E     E  + I     ++        +   +   Q+ 
Sbjct: 99  MKLYDFF-----EDKRNYYLVMECYKGGELFDEIIHRMKFNE-------VDAAVIIKQVL 146

Query: 194 RALAYIHN 201
             + Y+H 
Sbjct: 147 SGVTYLHK 154

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 80.8 bits (200), Expect = 2e-17
 Identities = 26/132 (19%), Positives = 53/132 (40%), Gaps = 26/132 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----------KVLQDKRYKNRELQIMQMLD 133
           Y     +G+G F +V + + + TG   A K          +    +    RE+ I++ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYT 189
           H N++ L   +    ++ ++   L+LE V   E  + +A+  + S             + 
Sbjct: 74  HHNVITLHDVY---ENRTDVV--LILELVSGGELFDFLAQKESLSE-------EEATSFI 121

Query: 190 YQICRALAYIHN 201
            QI   + Y+H 
Sbjct: 122 KQILDGVNYLHT 133

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 80.3 bits (199), Expect = 2e-17
 Identities = 36/122 (29%), Positives = 50/122 (40%), Gaps = 19/122 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQMLDHPNIVALK 141
           ++G GSF  V  A+   T    AIK      ++++    Y  RE  +M  LDHP  V L 
Sbjct: 37  ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
             F    D E+LY    L Y    E +  I +              + YT +I  AL Y+
Sbjct: 97  FTF---QDDEKLY--FGLSYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYL 146

Query: 200 HN 201
           H 
Sbjct: 147 HG 148

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 80.2 bits (198), Expect = 3e-17
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 7/126 (5%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQML-DHPNIV 138
                V+  G F  V++A+   +G   A+K++L    +  R   +E+  M+ L  HPNIV
Sbjct: 30  LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89

Query: 139 ALKHCFFSTTD--KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
                     +         L+L  + +               +    V    YQ CRA+
Sbjct: 90  QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149

Query: 197 AYIHNC 202
            ++H  
Sbjct: 150 QHMHRQ 155

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 80.1 bits (198), Expect = 4e-17
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 19/128 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALK 141
           +  E  +G G+  +V++ K + T +  A+K + +    K    E+ ++  L HPNI+ LK
Sbjct: 55  FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLK 114

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALA 197
             F       E+   LVLE V   E  +RI     YS   +R     VK    QI  A+A
Sbjct: 115 EIF---ETPTEIS--LVLELVTGGELFDRIVEKGYYS---ERDAADAVK----QILEAVA 162

Query: 198 YIH-NCIV 204
           Y+H N IV
Sbjct: 163 YLHENGIV 170

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 80.1 bits (198), Expect = 5e-17
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKNRELQIMQMLDHPNIV 138
           Y     +G+G+FGV    + + T E+VA+K       + +     RE+   + L HPNIV
Sbjct: 22  YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ--REIINHRSLRHPNIV 79

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
             K    + T    L   +++EY    E   RI         R      + +  Q+   +
Sbjct: 80  RFKEVILTPTH---LA--IIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGV 129

Query: 197 AYIHN 201
           +Y H+
Sbjct: 130 SYCHS 134

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 79.7 bits (197), Expect = 6e-17
 Identities = 37/132 (28%), Positives = 50/132 (37%), Gaps = 23/132 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y  +  +G G+F VV +   + TG   A K +   K          RE +I + L HPNI
Sbjct: 31  YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQIC 193
           V L        ++   Y  LV + V   E    I     YS                QI 
Sbjct: 91  VRLHDSI---QEESFHY--LVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQIL 138

Query: 194 RALAYIH-NCIV 204
            ++AY H N IV
Sbjct: 139 ESIAYCHSNGIV 150

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 78.8 bits (195), Expect = 6e-17
 Identities = 34/128 (26%), Positives = 48/128 (37%), Gaps = 22/128 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y  +  +G G+F VV +   + TG   A K +   K          RE +I + L HPNI
Sbjct: 8   YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQIC 193
           V L        ++   Y  LV + V   E    I     YS                QI 
Sbjct: 68  VRLHDSI---QEESFHY--LVFDLVTGGELFEDIVAREFYSEADAS-------HCIQQIL 115

Query: 194 RALAYIHN 201
            ++AY H+
Sbjct: 116 ESIAYCHS 123

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 79.3 bits (196), Expect = 8e-17
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 32/135 (23%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK----------KVLQDKRYKNRELQIMQMLD 133
           Y     +G+G F +V + + + TG   A K          +    +    RE+ I++ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRI-ARNYSRIHQRMPLIY----VK 186
           HPNI+ L   +    ++ ++   L+LE V   E  + +  +                   
Sbjct: 74  HPNIITLHDVY---ENRTDVV--LILELVSGGELFDFLAQKES----------LSEEEAT 118

Query: 187 LYTYQICRALAYIHN 201
            +  QI   + Y+H 
Sbjct: 119 SFIKQILDGVNYLHT 133

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 78.9 bits (194), Expect = 1e-16
 Identities = 17/131 (12%), Positives = 42/131 (32%), Gaps = 16/131 (12%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIK----KVLQDKRYKNRELQIMQMLD 133
                H++G G+F  V++A        +  +   +K        +     + ++ ++   
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQ 191
               +           +      LV E       +N I    +   + MP   V  +  +
Sbjct: 126 QHMFMKFYSAHL---FQNGSV--LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180

Query: 192 ICRALAYIHNC 202
           +   +  +H+C
Sbjct: 181 MLYMIEQVHDC 191

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 77.6 bits (192), Expect = 1e-16
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           +     +G G++G V  A  R T E VA+K V   +         +E+ I +ML+H N+V
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
                          Y  L LEY    E  +RI          MP    + + +Q+   +
Sbjct: 69  KFYGHRREGNI---QY--LFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGV 118

Query: 197 AYIHN 201
            Y+H 
Sbjct: 119 VYLHG 123

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 21/130 (16%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN---RELQIMQMLDHP 135
           Y+   ++G GS+G V +    ET    A+K     K+ +    +    +E+Q+++ L H 
Sbjct: 7   YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVP----ETVNRIARNYSRIHQRMPLIYVKLYTYQ 191
           N++ L    ++   K+++Y  +V+EY      E ++ +        +R P+     Y  Q
Sbjct: 67  NVIQLVDVLYNEE-KQKMY--MVMEYCVCGMQEMLDSVP------EKRFPVCQAHGYFCQ 117

Query: 192 ICRALAYIHN 201
           +   L Y+H+
Sbjct: 118 LIDGLEYLHS 127

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 16/125 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML-DHPNIVALKH 142
            +   V+G G  G V Q   + T E  A+ K+LQD     RE+++       P+IV +  
Sbjct: 64  KVTSQVLGLGINGKVLQIFNKRTQEKFAL-KMLQDCPKARREVELHWRASQCPHIVRI-V 121

Query: 143 CFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIY----VKLYTYQICRAL 196
             +         L +V+E +   E        +SRI  R    +           I  A+
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGEL-------FSRIQDRGDQAFTEREASEIMKSIGEAI 174

Query: 197 AYIHN 201
            Y+H+
Sbjct: 175 QYLHS 179

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 29/137 (21%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----------------REL 126
           Y     +G+G++G V   K +      AIK + + +  K                   E+
Sbjct: 38  YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97

Query: 127 QIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIY 184
            +++ LDHPNI+ L   F    DK+  Y  LV E+    E   +I  N  +  +      
Sbjct: 98  SLLKSLDHPNIIKLFDVF---EDKKYFY--LVTEFYEGGELFEQII-NRHKFDEC----D 147

Query: 185 VKLYTYQICRALAYIHN 201
                 QI   + Y+H 
Sbjct: 148 AANIMKQILSGICYLHK 164

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 78.1 bits (193), Expect = 1e-16
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 17/125 (13%)

Query: 85  IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDH-PNI 137
           +    +G G F VV Q   + TG+  A K + + +R ++       E+ ++++    P +
Sbjct: 32  LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           + L   +    +  E+   L+LEY    E  +        + + +    V     QI   
Sbjct: 92  INLHEVY---ENTSEII--LILEYAAGGEIFSLCL---PELAEMVSENDVIRLIKQILEG 143

Query: 196 LAYIH 200
           + Y+H
Sbjct: 144 VYYLH 148

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 77.2 bits (191), Expect = 2e-16
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 20/139 (14%)

Query: 73  GRNGNSKQKV-SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------R 124
           G   + + K+  Y+    +G G+FG V   + + TG  VA+K + + K           R
Sbjct: 1   GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60

Query: 125 ELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPL 182
           E+Q +++  HP+I+ L     + TD    +  +V+EYV   E  + I +     H R+  
Sbjct: 61  EIQNLKLFRHPHIIKLYQVISTPTD---FF--MVMEYVSGGELFDYICK-----HGRVEE 110

Query: 183 IYVKLYTYQICRALAYIHN 201
           +  +    QI  A+ Y H 
Sbjct: 111 MEARRLFQQILSAVDYCHR 129

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 78.1 bits (193), Expect = 2e-16
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 16/125 (12%)

Query: 85  IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML-DHPNIVALKHC 143
           +++ V+G G  G V +   R TG+  A+K +L D     +E+         P+IV +   
Sbjct: 32  LSKQVLGLGVNGKVLECFHRRTGQKCALK-LLYDSPKARQEVDHHWQASGGPHIVCILD- 89

Query: 144 FFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIY----VKLYTYQICRALA 197
            +      +  L +++E +   E        +SRI +R    +           I  A+ 
Sbjct: 90  VYENMHHGKRCLLIIMECMEGGEL-------FSRIQERGDQAFTEREAAEIMRDIGTAIQ 142

Query: 198 YIHNC 202
           ++H+ 
Sbjct: 143 FLHSH 147

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 77.7 bits (192), Expect = 2e-16
 Identities = 41/132 (31%), Positives = 57/132 (43%), Gaps = 23/132 (17%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHP 135
           Y     +G G+F  V  A+   TG  VAIK +  DK   N        RE++IM++L+HP
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHP 74

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           NIV L     +        L L++EY    E  + +       H RM     +    QI 
Sbjct: 75  NIVKLFEVIETEKT-----LYLIMEYASGGEVFDYLVA-----HGRMKEKEARSKFRQIV 124

Query: 194 RALAYIH-NCIV 204
            A+ Y H   IV
Sbjct: 125 SAVQYCHQKRIV 136

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 19/122 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQMLDHPNIVALK 141
            +G GSFG V   +  +T ++ A+K     K ++    R   +ELQIMQ L+HP +V L 
Sbjct: 22  AIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           + F    D+E+++  +V++ +   +    + +N            VKL+  ++  AL Y+
Sbjct: 82  YSF---QDEEDMF--MVVDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYL 131

Query: 200 HN 201
            N
Sbjct: 132 QN 133

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 77.4 bits (191), Expect = 3e-16
 Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           +     +G G++G V  A  R T E VA+K V   +         +E+ I +ML+H N+V
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
                          Y  L LEY    E  +RI          MP    + + +Q+   +
Sbjct: 69  KFYGHRREGNI---QY--LFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGV 118

Query: 197 AYIHN 201
            Y+H 
Sbjct: 119 VYLHG 123

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 76.3 bits (188), Expect = 7e-16
 Identities = 19/137 (13%), Positives = 45/137 (32%), Gaps = 33/137 (24%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN----------------RELQIM 129
             G F  +      +  +  A+K      + + + +                   ELQI+
Sbjct: 40  NQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQII 97

Query: 130 QMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-----ETVNRIARNYSRIHQRMPLIY 184
             + +   +  +      T+ +E+Y  ++ EY+      +               +P+  
Sbjct: 98  TDIKNEYCLTCEGII---TNYDEVY--IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQV 152

Query: 185 VKLYTYQICRALAYIHN 201
           +K     +  + +YIHN
Sbjct: 153 IKCIIKSVLNSFSYIHN 169

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 76.2 bits (188), Expect = 8e-16
 Identities = 32/151 (21%), Positives = 61/151 (40%), Gaps = 30/151 (19%)

Query: 65  HVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR 124
           H I   +   +        Y  +  +G GS+ V  +   + T    A+K + + KR    
Sbjct: 7   HSIVQQLHRNSIQFTDG--YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE 64

Query: 125 ELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYS----- 174
           E++I+     HPNI+ LK  +    D + +Y  +V E +   E +++I R   +S     
Sbjct: 65  EIEILLRYGQHPNIITLKDVY---DDGKYVY--VVTELMKGGELLDKILRQKFFSEREAS 119

Query: 175 RIHQRMPLIYVKLYTYQICRALAYIHNC-IV 204
            +             + I + + Y+H   +V
Sbjct: 120 AV------------LFTITKTVEYLHAQGVV 138

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 75.6 bits (186), Expect = 2e-15
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 18/122 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQMLDHPNIVALK 141
           V+G G+FG V   K +   ++ A+K     ++L+         E  ++   D   I  L 
Sbjct: 81  VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           + F    D   LY  LV++Y    + +  +    S+   R+P    + Y  ++  A+  +
Sbjct: 141 YAF---QDDNNLY--LVMDYYVGGDLLTLL----SKFEDRLPEEMARFYLAEMVIAIDSV 191

Query: 200 HN 201
           H 
Sbjct: 192 HQ 193

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 73.7 bits (182), Expect = 4e-15
 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 19/123 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQMLDHPNIVALK 141
            +GTGSFG V   + R  G   A+K      V++ K   + N E  ++ ++ HP I+ + 
Sbjct: 13  TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
             F    D ++++  ++++Y+   E  + + ++     QR P    K Y  ++C AL Y+
Sbjct: 73  GTF---QDAQQIF--MIMDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYL 122

Query: 200 HNC 202
           H+ 
Sbjct: 123 HSK 125

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 74.4 bits (183), Expect = 4e-15
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 18/122 (14%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKK-----VLQDKR--YKNRELQIMQMLDHPNIVALK 141
           V+G G+F  V   K ++TG++ A+K      +L+         E  ++   D   I  L 
Sbjct: 68  VIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
             F    D+  LY  LV+EY    + +  +    S+  +R+P    + Y  +I  A+  +
Sbjct: 128 FAF---QDENYLY--LVMEYYVGGDLLTLL----SKFGERIPAEMARFYLAEIVMAIDSV 178

Query: 200 HN 201
           H 
Sbjct: 179 HR 180

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 74.8 bits (184), Expect = 5e-15
 Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 20/139 (14%)

Query: 73  GRNGNSKQKV-SYIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--R 124
            +  + + K+  YI    +G G+FG V   K   TG  VA+K     K+          R
Sbjct: 6   KQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRR 65

Query: 125 ELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPL 182
           E+Q +++  HP+I+ L     + +D   ++  +V+EYV   E  + I +     + R+  
Sbjct: 66  EIQNLKLFRHPHIIKLYQVISTPSD---IF--MVMEYVSGGELFDYICK-----NGRLDE 115

Query: 183 IYVKLYTYQICRALAYIHN 201
              +    QI   + Y H 
Sbjct: 116 KESRRLFQQILSGVDYCHR 134

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 73.5 bits (181), Expect = 5e-15
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 23/124 (18%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
           E VVG G+FGVV +AK R   + VAIK++  +   K    EL+ +  ++HPNIV L    
Sbjct: 13  EEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA- 69

Query: 145 FSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYT-----YQICRALAY 198
               +     + LV+EY    ++      Y+ +H   PL Y           Q  + +AY
Sbjct: 70  --CLNP----VCLVMEYAEGGSL------YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117

Query: 199 IHNC 202
           +H+ 
Sbjct: 118 LHSM 121

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 20/122 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQMLDHPNIVALK 141
           V+G G+FG V   + + T ++ A+K     ++++     +   E  IM   + P +V L 
Sbjct: 76  VIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 135

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           + F    D   LY  +V+EY+P  + VN ++         +P  + + YT ++  AL  I
Sbjct: 136 YAF---QDDRYLY--MVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAI 184

Query: 200 HN 201
           H+
Sbjct: 185 HS 186

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 19/133 (14%)

Query: 78  SKQKV-SYIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIM 129
           SK+ +  YI    +G GSFG V  A   +T + VA+K      + +   +    RE+  +
Sbjct: 4   SKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL 63

Query: 130 QMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLY 188
           ++L HP+I+ L     + TD   +   +V+EY   E  + I        +RM     + +
Sbjct: 64  KLLRHPHIIKLYDVITTPTD---IV--MVIEYAGGELFDYIVE-----KKRMTEDEGRRF 113

Query: 189 TYQICRALAYIHN 201
             QI  A+ Y H 
Sbjct: 114 FQQIICAIEYCHR 126

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 72.4 bits (178), Expect = 1e-14
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 15/128 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           Y  + V+G+G+  VV  A C    E VAIK++  +K   +     +E+Q M    HPNIV
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76

Query: 139 ALKHCFFSTTDKEELYLNLVLEY-----VPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           +    F     K+EL+  LV++      V + +  I          +    +     ++ 
Sbjct: 77  SYYTSFV---VKDELW--LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131

Query: 194 RALAYIHN 201
             L Y+H 
Sbjct: 132 EGLEYLHK 139

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 23/126 (18%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--------RELQIMQMLDHPNIV 138
           E ++G G FG V++A     G+ VA+K    D             +E ++  ML HPNI+
Sbjct: 12  EEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69

Query: 139 ALK-HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           AL+  C      +  L   LV+E+     +NR+        +R+P   +  +  QI R +
Sbjct: 70  ALRGVC----LKEPNLC--LVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGM 118

Query: 197 AYIHNC 202
            Y+H+ 
Sbjct: 119 NYLHDE 124

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 22/128 (17%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----------RELQIMQMLDHP 135
           E  +G G FG+V + +  +   +VAIK ++                  RE+ IM  L+HP
Sbjct: 24  EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           NIV L        +       +V+E+VP   +     + +     +           I  
Sbjct: 84  NIVKLYGL---MHNP----PRMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIAL 133

Query: 195 ALAYIHNC 202
            + Y+ N 
Sbjct: 134 GIEYMQNQ 141

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 30/136 (22%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK------------KVLQDKRYK-NRELQIMQ 130
           Y  + ++G G   VV +   + T +  A+K            + +Q+ R    +E+ I++
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78

Query: 131 MLD-HPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYV 185
            +  HPNI+ LK  +         +  LV + +   E  + +      S    R      
Sbjct: 79  KVSGHPNIIQLKDTY---ETNTFFF--LVFDLMKKGELFDYLTEKVTLSEKETR------ 127

Query: 186 KLYTYQICRALAYIHN 201
                 +   +  +H 
Sbjct: 128 -KIMRALLEVICALHK 142

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 26/137 (18%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN-------RELQIMQM 131
           Y     +G+G+FG V+ A  +E  + V +K     KVL+D   ++        E+ I+  
Sbjct: 26  YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85

Query: 132 LDHPNIVALKHCFFSTTDKEELYLNLVLEYVP---ETVNRIARNYSRIHQRMPLIYVKLY 188
           ++H NI+ +   F    ++      LV+E      +    I R     H R+        
Sbjct: 86  VEHANIIKVLDIF---ENQGFFQ--LVMEKHGSGLDLFAFIDR-----HPRLDEPLASYI 135

Query: 189 TYQICRALAYIH-NCIV 204
             Q+  A+ Y+    I+
Sbjct: 136 FRQLVSAVGYLRLKDII 152

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 71.5 bits (176), Expect = 3e-14
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 33/132 (25%)

Query: 85  IAEHVVGTGSFGVVFQAKCRETGEIVAIK----KVLQDKRYKNRELQIMQML-DHPNIVA 139
           + E V+G G+   V       T +  A+K    +    +    RE++++     H N++ 
Sbjct: 16  LQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLE 75

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYT-------- 189
           L   F    +++  Y  LV E +             S IH+R      + +         
Sbjct: 76  LIEFF---EEEDRFY--LVFEKMRGGSI-------LSHIHKR------RHFNELEASVVV 117

Query: 190 YQICRALAYIHN 201
             +  AL ++HN
Sbjct: 118 QDVASALDFLHN 129

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 71.5 bits (176), Expect = 4e-14
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 19/123 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQMLDHPNIVALK 141
            +GTGSFG V   K +E+G   A+K     KV++ K   +   E +I+Q ++ P +V L+
Sbjct: 48  TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
             F    D   LY  +V+EYV   E  + +     R   R    + + Y  QI     Y+
Sbjct: 108 FSF---KDNSNLY--MVMEYVAGGEMFSHL-----RRIGRFSEPHARFYAAQIVLTFEYL 157

Query: 200 HNC 202
           H+ 
Sbjct: 158 HSL 160

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 24/124 (19%), Positives = 57/124 (45%), Gaps = 18/124 (14%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-NRELQIMQMLD-HPNIVALK 141
            + +  +G GSF +  +   +++ +  A+K + +       +E+  +++ + HPNIV L 
Sbjct: 13  DLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLH 72

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYSRIHQRMPLIYVKLYTYQICRALA 197
             F    D+   +  LV+E +   E   RI +  ++S   +            ++  A++
Sbjct: 73  EVF---HDQLHTF--LVMELLNGGELFERIKKKKHFS---ETE----ASYIMRKLVSAVS 120

Query: 198 YIHN 201
           ++H+
Sbjct: 121 HMHD 124

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 70.6 bits (173), Expect = 7e-14
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 14/88 (15%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL---------QDKRYKNRELQIMQMLDH 134
           Y  +  +G GS+GVV  A   +T  I AIK +          +D      E+++M+ L H
Sbjct: 28  YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87

Query: 135 PNIVALKHCFFSTTDKEELYLNLVLEYV 162
           PNI  L   +    D++ +   LV+E  
Sbjct: 88  PNIARLYEVY---EDEQYIC--LVMELC 110

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 70.1 bits (172), Expect = 7e-14
 Identities = 30/137 (21%), Positives = 62/137 (45%), Gaps = 25/137 (18%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ--DKRYKN--RELQIMQMLDHPNIVALKH 142
             V+G G FG   +   RETGE++ +K++++  ++  +   +E+++M+ L+HPN++    
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF-- 72

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
                   + L    + EY+   T+  I ++      + P      +   I   +AY+H 
Sbjct: 73  -IGVLYKDKRLN--FITEYIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHS 126

Query: 201 -----------NCIVDQ 206
                      NC+V +
Sbjct: 127 MNIIHRDLNSHNCLVRE 143

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 70.3 bits (172), Expect = 1e-13
 Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
           G      V  A+ + TGE V ++++      ++       EL + ++ +HPNIV  +  F
Sbjct: 36  GFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF 95

Query: 145 FSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            +  +     L +V  ++   +   +   +      M  + +      + +AL YIH+
Sbjct: 96  IADNE-----LWVVTSFMAYGSAKDLICTH--FMDGMNELAIAYILQGVLKALDYIHH 146

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 31/136 (22%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----------KVLQDKRYK-NRELQIMQM 131
           Y  + V+G G   VV +   R TG   A+K           + L++ R    RE  I++ 
Sbjct: 96  YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155

Query: 132 L-DHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIAR--NYS-RIHQRMPLIYV 185
           +  HP+I+ L   +        ++  LV + +   E  + +      S +          
Sbjct: 156 VAGHPHIITLIDSY---ESSSFMF--LVFDLMRKGELFDYLTEKVALSEK--------ET 202

Query: 186 KLYTYQICRALAYIHN 201
           +     +  A++++H 
Sbjct: 203 RSIMRSLLEAVSFLHA 218

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 69.4 bits (170), Expect = 2e-13
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 15/125 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
           +     +G GSFG V+ A+     E+VAIKK+    +  N       +E++ +Q L HPN
Sbjct: 56  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
            +  + C+            LV+EY   + + +   + +    +  + +   T+   + L
Sbjct: 116 TIQYRGCYLREHT-----AWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGL 167

Query: 197 AYIHN 201
           AY+H+
Sbjct: 168 AYLHS 172

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 17/123 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR--------ELQIMQMLDHPNIVAL 140
           V+G G FG VF  + + TG++ A  K L  KR K R        E +I+  +    IV+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYAC-KKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
            +  F T       L LV+  +   +    I       +          YT QI   L +
Sbjct: 251 AYA-FETKTD----LCLVMTIMNGGDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEH 304

Query: 199 IHN 201
           +H 
Sbjct: 305 LHQ 307

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 68.5 bits (168), Expect = 2e-13
 Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 15/123 (12%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
           +  +G GSFG V +A+    G  VA+K +++   +        RE+ IM+ L HPNIV  
Sbjct: 42  KEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99

Query: 141 KHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
                + T    L   +V EY+   ++ R+    S   +++         Y + + + Y+
Sbjct: 100 MG---AVTQPPNLS--IVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYL 153

Query: 200 HNC 202
           HN 
Sbjct: 154 HNR 156

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 68.0 bits (167), Expect = 5e-13
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 19/122 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQMLDHPNIVALK 141
           ++G G+FG V   + + TG   A+K      ++      +   E +++Q   HP + ALK
Sbjct: 12  LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71

Query: 142 HCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           +  F T D+  L    V+EY    E    ++R      +       + Y  +I  AL Y+
Sbjct: 72  YA-FQTHDR--LC--FVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYL 121

Query: 200 HN 201
           H+
Sbjct: 122 HS 123

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 67.7 bits (166), Expect = 5e-13
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 10/83 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           +     +G GSFG VF+     T ++VAIK +  ++         +E+ ++   D P + 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83

Query: 139 ALKHCFFSTTDKEELYLNLVLEY 161
                +   T      L +++EY
Sbjct: 84  KYYGSYLKDTK-----LWIIMEY 101

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 67.3 bits (165), Expect = 6e-13
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 21/130 (16%)

Query: 87  EHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
              +G G+FG V   +       TGE+VA+KK LQ    ++     RE++I++ L H NI
Sbjct: 15  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK-LQHSTEEHLRDFEREIEILKSLQHDNI 73

Query: 138 VALKHCFFSTTDKEE-LYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRA 195
           V  K      +     L   L++EY+P       R+Y + H+ R+  I +  YT QIC+ 
Sbjct: 74  VKYKGV--CYSAGRRNLK--LIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKG 126

Query: 196 LAYI--HNCI 203
           + Y+     I
Sbjct: 127 MEYLGTKRYI 136

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 68.2 bits (166), Expect = 6e-13
 Identities = 25/210 (11%), Positives = 49/210 (23%), Gaps = 31/210 (14%)

Query: 22  SSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQK 81
           S   + D   R++L+          E+   EP  +      T           +  S+ +
Sbjct: 2   SHMEAGDSFMRDLLKREEELIGYCREEALKEPAAMVEAVTATVWPQNAETTVDSLLSQGE 61

Query: 82  VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDH 134
                   +  G   VVF  +  E  E  A+K                +        L  
Sbjct: 62  RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG 121

Query: 135 PNIVALKHCF---------------------FSTTDKEELYLNLVLEYVP---ETVNRIA 170
            +    +                            D       L++       E +    
Sbjct: 122 ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTL 181

Query: 171 RNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                      ++ + + T Q+ R  A + 
Sbjct: 182 DFVYVFRGDEGILALHILTAQLIRLAANLQ 211

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 49.3 bits (117), Expect = 7e-07
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 1/80 (1%)

Query: 217 PTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEAC 276
           P       +  ++                    LP     L+ RF  +    R   LEA 
Sbjct: 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351

Query: 277 VHPFFDELRD-PNTRLPNGR 295
             P F +L++  ++ L  G+
Sbjct: 352 ETPEFLQLQNEISSSLSTGQ 371

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 68.4 bits (167), Expect = 7e-13
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 24/126 (19%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRE-----------LQIMQMLDHPNI 137
           ++G G FG V+  +  +TG++ A+ K L  KR K ++           L ++   D P I
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAM-KCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           V + + F      ++L    +L+ +   +    +++     H       ++ Y  +I   
Sbjct: 255 VCMSYAF---HTPDKLS--FILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILG 304

Query: 196 LAYIHN 201
           L ++HN
Sbjct: 305 LEHMHN 310

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 67.6 bits (165), Expect = 7e-13
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 13/122 (10%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKNRELQIMQM--LDHPNIVALKHC 143
             ++G G +G V++         VA+K     +++    E  I ++  ++H NI      
Sbjct: 18  LELIGRGRYGAVYKGSLD--ERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVG 75

Query: 144 FFSTTDKEELYLNLVLEYVPET--VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
               T    +   LV+EY P       ++ + S       L       + + R LAY+H 
Sbjct: 76  DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLA------HSVTRGLAYLHT 129

Query: 202 CI 203
            +
Sbjct: 130 EL 131

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 67.4 bits (165), Expect = 8e-13
 Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 19/129 (14%)

Query: 87  EHVVGTGSFGVVFQAKCR----ETGEIVAIK--KVLQDKRYKN--RELQIMQMLDHPNIV 138
              +G G+FG V   +       TGE+VA+K  +   ++  ++  RE++I++ L H NIV
Sbjct: 46  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 105

Query: 139 ALKHCFFSTTDKEE-LYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
             K      +     L   L++EY+P       R+Y + H+ R+  I +  YT QIC+ +
Sbjct: 106 KYKGV--CYSAGRRNLK--LIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158

Query: 197 AYI--HNCI 203
            Y+     I
Sbjct: 159 EYLGTKRYI 167

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 66.9 bits (164), Expect = 9e-13
 Identities = 26/123 (21%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVA 139
           Y     +G G+ G V+ A    TG+ VAI+++       K     E+ +M+   +PNIV 
Sbjct: 22  YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
               +    +     L +V+EY+   ++  +          M    +     +  +AL +
Sbjct: 82  YLDSYLVGDE-----LWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEF 131

Query: 199 IHN 201
           +H+
Sbjct: 132 LHS 134

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 21/127 (16%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVA 139
           +     +G G+FG V++AK +ETG + A K +     ++      E++I+   DHP IV 
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80

Query: 140 LKHCFFSTTDKEELYLNLVLEY-----VPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           L   ++         L +++E+     V   +  + R        +    +++   Q+  
Sbjct: 81  LLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDR-------GLTEPQIQVVCRQMLE 128

Query: 195 ALAYIHN 201
           AL ++H+
Sbjct: 129 ALNFLHS 135

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 66.1 bits (162), Expect = 1e-12
 Identities = 14/123 (11%), Positives = 43/123 (34%), Gaps = 14/123 (11%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVAL 140
              +     G +++ + +  G  + +K +          R  N E   +++  HPN++ +
Sbjct: 15  LTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV 72

Query: 141 KHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
                        +  L+  ++P  ++  +    +     +       +   + R +A++
Sbjct: 73  LGA---CQSPPAPHPTLITHWMPYGSLYNVLHEGTNF--VVDQSQAVKFALDMARGMAFL 127

Query: 200 HNC 202
           H  
Sbjct: 128 HTL 130

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 67.4 bits (165), Expect = 1e-12
 Identities = 37/175 (21%), Positives = 71/175 (40%), Gaps = 26/175 (14%)

Query: 41  DQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVS-----YIAEHVVGTGSF 95
             V +   + +  ++    G+ + +     +       K +V+     Y+   ++G G+F
Sbjct: 104 QTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMNEFEYLK--LLGKGTF 161

Query: 96  GVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQMLDHPNIVALKHCFFSTT 148
           G V   K + TG   A+K      ++      +   E +++Q   HP + ALK+  F T 
Sbjct: 162 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS-FQTH 220

Query: 149 DKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
           D+  L    V+EY    E    ++R      +       + Y  +I  AL Y+H+
Sbjct: 221 DR--LC--FVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHS 266

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 18/128 (14%)

Query: 87  EHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
              +G G FG V           TGE+VA+K +  D   ++     +E+ I++ L H +I
Sbjct: 36  IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           +  K C     D     L LV+EYVP       R+Y   H  + L  + L+  QIC  +A
Sbjct: 96  IKYKGC---CEDAGAASLQLVMEYVP---LGSLRDYLPRH-SIGLAQLLLFAQQICEGMA 148

Query: 198 YIH--NCI 203
           Y+H  + I
Sbjct: 149 YLHAQHYI 156

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 66.6 bits (163), Expect = 1e-12
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 25/136 (18%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN-----RELQIMQMLD 133
           Y    ++G+G FG V+          VAIK     ++       N      E+ +++ + 
Sbjct: 45  YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104

Query: 134 H--PNIVALKHCFFSTTDKEELYLNLVLEYVP---ETVNRIARNYSRIHQRMPLIYVKLY 188
                ++ L   +F   D       L+LE      +  + I          +     + +
Sbjct: 105 SGFSGVIRLLD-WFERPDS--FV--LILERPEPVQDLFDFITE-----RGALQEELARSF 154

Query: 189 TYQICRALAYIHNCIV 204
            +Q+  A+ + HNC V
Sbjct: 155 FWQVLEAVRHCHNCGV 170

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 87  EHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
              +G G+FG V   +       TG +VA+K  LQ           RE+QI++ L    I
Sbjct: 28  ISQLGKGNFGSVELCRYDPLGDNTGALVAVK-QLQHSGPDQQRDFQREIQILKALHSDFI 86

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
           V  +        ++ L   LV+EY+P   +   R++ + H+ R+    + LY+ QIC+ +
Sbjct: 87  VKYRGV-SYGPGRQSLR--LVMEYLP---SGCLRDFLQRHRARLDASRLLLYSSQICKGM 140

Query: 197 AYI--HNCI 203
            Y+    C+
Sbjct: 141 EYLGSRRCV 149

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 15/123 (12%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
              +G G FG V     R  G  VA+K +  D   +    E  +M  L H N+V L    
Sbjct: 26  LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGV- 82

Query: 145 FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI--H 200
               +K  LY  +V EY+         +Y R   R  L    L  ++  +C A+ Y+  +
Sbjct: 83  -IVEEKGGLY--IVTEYMA---KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136

Query: 201 NCI 203
           N +
Sbjct: 137 NFV 139

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALK 141
           +     +G GS+G V++A  +ETG+IVAIK+V  +   +   +E+ IMQ  D P++V   
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90

Query: 142 HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             +F  TD     L +V+EY    +V+ I       ++ +    +        + L Y+H
Sbjct: 91  GSYFKNTD-----LWIVMEYCGAGSVSDI---IRLRNKTLTEDEIATILQSTLKGLEYLH 142

Query: 201 N 201
            
Sbjct: 143 F 143

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 16/120 (13%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVL-QDKRYKNRELQIMQM--LDHPNIVA-LKH 142
              VG G +G V++   +  GE VA+K    +D++   RE ++     L H NI+  +  
Sbjct: 13  LECVGKGRYGEVWRGSWQ--GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIAS 70

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYS-RIHQRMPLIYVKLYTYQICRALAYIH 200
              S     +L+  L+  Y    ++    +  +      + ++        I   LA++H
Sbjct: 71  DMTSRHSSTQLW--LITHYHEMGSLYDYLQLTTLDTVSCLRIV------LSIASGLAHLH 122

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 65.0 bits (159), Expect = 4e-12
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
           +H +G G +G V++   ++    VA+K + +D        +E  +M+ + HPN+V L   
Sbjct: 18  KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI-- 199
               T +   Y  ++ E++         +Y R   R  +  V L     QI  A+ Y+  
Sbjct: 78  ---CTREPPFY--IITEFMT---YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129

Query: 200 HNCI 203
            N I
Sbjct: 130 KNFI 133

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVALKHCFF 145
           +G GS G+V  A+ + +G  VA+K +     Q +     E+ IM+   H N+V +   + 
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112

Query: 146 STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
                EEL+  +++E++    +  I         R+    +      + +ALAY+H 
Sbjct: 113 V---GEELW--VLMEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHA 159

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 65.1 bits (159), Expect = 5e-12
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 8/124 (6%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNRELQIMQML-DHPNIVA 139
           +    +VG G++G V++ +  +TG++ AIK +     ++    +E+ +++    H NI  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85

Query: 140 LKHCFF-STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
               F        +  L LV+E+    +V  + +N       +   ++     +I R L+
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLS 143

Query: 198 YIHN 201
           ++H 
Sbjct: 144 HLHQ 147

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 65.4 bits (160), Expect = 5e-12
 Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 15/123 (12%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCF 144
              +G G FG V     R  G  VA+K +  D   +    E  +M  L H N+V L    
Sbjct: 198 LQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGV- 254

Query: 145 FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI--H 200
               +K  LY  +V EY+         +Y R   R  L    L  ++  +C A+ Y+  +
Sbjct: 255 -IVEEKGGLY--IVTEYMA---KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308

Query: 201 NCI 203
           N +
Sbjct: 309 NFV 311

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 64.6 bits (158), Expect = 5e-12
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 18/129 (13%)

Query: 87  EHVVGTGSFGVVFQAKCR----ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
              +G G FG V   +       TGE VA+K +  +    +     +E++I++ L H NI
Sbjct: 26  IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIH-QRMPLIYVKLYTYQICRAL 196
           V  K      T+     + L++E++P   +   + Y   +  ++ L     Y  QIC+ +
Sbjct: 86  VKYKGI---CTEDGGNGIKLIMEFLP---SGSLKEYLPKNKNKINLKQQLKYAVQICKGM 139

Query: 197 AYI--HNCI 203
            Y+     +
Sbjct: 140 DYLGSRQYV 148

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 65.6 bits (160), Expect = 6e-12
 Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 19/123 (15%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR--------ELQIMQMLDHPNIVAL 140
           V+G G FG V   + R TG++ A  K L+ KR K R        E QI++ ++   +V+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYAC-KKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
            +  + T D     L LVL  +   +    I   Y       P      Y  +IC  L  
Sbjct: 250 AYA-YETKDA----LCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYAAEICCGLED 301

Query: 199 IHN 201
           +H 
Sbjct: 302 LHR 304

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 64.2 bits (157), Expect = 6e-12
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 41/142 (28%)

Query: 91  GTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN---------------------- 123
           G GS+GVV  A         A+K     K+++   +                        
Sbjct: 22  GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIE 81

Query: 124 ---RELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQ 178
              +E+ I++ LDHPN+V L        +++ LY  +V E V     +           +
Sbjct: 82  QVYQEIAILKKLDHPNVVKL-VEVLDDPNEDHLY--MVFELVNQGPVMEVPT------LK 132

Query: 179 RMPLIYVKLYTYQICRALAYIH 200
            +     + Y   + + + Y+H
Sbjct: 133 PLSEDQARFYFQDLIKGIEYLH 154

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 64.5 bits (158), Expect = 6e-12
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 21/124 (16%)

Query: 89  VVGTGSFGVVFQAK---CRETGEIVAIK-----KVLQDKRYKNR-ELQIMQMLDHPNIVA 139
           V+G GSFG VF  K     +  ++ A+K      +    R + + E  I+  ++HP IV 
Sbjct: 31  VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90

Query: 140 LKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           L +  F T  K  LY  L+L+++   +   R+++             VK Y  ++  AL 
Sbjct: 91  LHYA-FQTEGK--LY--LILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALD 140

Query: 198 YIHN 201
           ++H+
Sbjct: 141 HLHS 144

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 63.8 bits (156), Expect = 7e-12
 Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 11/119 (9%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN--RELQI-MQMLDHPNIVALKH 142
            +G G++GVV + +   +G+I+A+K++   +  +  K    +L I M+ +D P  V    
Sbjct: 14  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
             F   D     + + +E +  ++++  +      Q +P   +      I +AL ++H+
Sbjct: 74  ALFREGD-----VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 64.3 bits (157), Expect = 8e-12
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 27/138 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN-----RELQIMQMLD 133
           Y    ++G G FG VF          VAIK     +VL      +      E+ ++  + 
Sbjct: 33  YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92

Query: 134 ----HPNIVALKHCFFSTTDKEELYLNLVLEYVP---ETVNRIARNYSRIHQRMPLIYVK 186
               HP ++ L   +F T +       LVLE      +  + I          +     +
Sbjct: 93  AGGGHPGVIRL-LDWFETQEG--FM--LVLERPLPAQDLFDYITE-----KGPLGEGPSR 142

Query: 187 LYTYQICRALAYIHNCIV 204
            +  Q+  A+ + H+  V
Sbjct: 143 CFFGQVVAAIQHCHSRGV 160

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 64.4 bits (157), Expect = 1e-11
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 15/124 (12%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
           +H +G G +G V++   ++    VA+K + +D        +E  +M+ + HPN+V L   
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI-- 199
               T +   Y  ++ E++         +Y R   R  +  V L     QI  A+ Y+  
Sbjct: 285 ---CTREPPFY--IITEFMT---YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 336

Query: 200 HNCI 203
            N I
Sbjct: 337 KNFI 340

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVL-QDKRYKNRELQIMQM--LDHPNIVA-LKH 142
              +G G +G V+  K R  GE VA+K     ++    RE +I Q   + H NI+  +  
Sbjct: 42  VKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAA 99

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYS-RIHQRMPLIYVKLYTYQICRALAYIH 200
               T    +LY  L+ +Y    ++    ++ +      + L       Y     L ++H
Sbjct: 100 DIKGTGSWTQLY--LITDYHENGSLYDYLKSTTLDAKSMLKLA------YSSVSGLCHLH 151

Query: 201 NCIV 204
             I 
Sbjct: 152 TEIF 155

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 63.4 bits (155), Expect = 1e-11
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 23/130 (17%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
             V+G+G+FG V++      GE     VAIK++ +    K       E  +M  +D+P++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 138 VALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRA 195
             L   C         +   L+ + +P        +Y R H+  +   Y+  +  QI + 
Sbjct: 80  CRLLGICL-----TSTVQ--LITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129

Query: 196 LAYI--HNCI 203
           + Y+     +
Sbjct: 130 MNYLEDRRLV 139

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 27/173 (15%)

Query: 44  DNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEH-----VVGTGSFGVV 98
           D D            +G+             +G +   +    +      V+G GS+  V
Sbjct: 11  DYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLG--LQDFDLLRVIGRGSYAKV 68

Query: 99  FQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQM-LDHPNIVALKHCFFSTTDK 150
              + ++T  I A++      V  D+   +   E  + +   +HP +V L  C F T  +
Sbjct: 69  LLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC-FQTESR 127

Query: 151 EELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
             L+   V+EYV   + +  + R      +++P  + + Y+ +I  AL Y+H 
Sbjct: 128 --LF--FVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHE 171

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 63.3 bits (155), Expect = 1e-11
 Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 23/126 (18%)

Query: 89  VVGTGSFGVVFQAK---CRETGEIVAIK-----KVLQDKRYKNR---ELQIMQMLDHPNI 137
           V+G G +G VFQ +      TG+I A+K      ++++ +       E  I++ + HP I
Sbjct: 24  VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           V L +  F T  K  LY  L+LEY+   E   ++ R                Y  +I  A
Sbjct: 84  VDLIYA-FQTGGK--LY--LILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMA 133

Query: 196 LAYIHN 201
           L ++H 
Sbjct: 134 LGHLHQ 139

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 20/123 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIM-QMLDHPNIVAL 140
           V+G GSFG V  A+ +      A+K      +L+ K  ++   E  ++ + + HP +V L
Sbjct: 45  VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
               F T DK  LY   VL+Y+   E    + R      +       + Y  +I  AL Y
Sbjct: 105 HFS-FQTADK--LY--FVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGY 154

Query: 199 IHN 201
           +H+
Sbjct: 155 LHS 157

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 32/123 (26%), Positives = 58/123 (47%), Gaps = 20/123 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKR--YKNRELQIMQM-LDHPNIVAL 140
           V+G GS+  V   + ++T  I A+K      V  D+   +   E  + +   +HP +V L
Sbjct: 16  VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             C F T  +  L+   V+EYV   + +  + R      +++P  + + Y+ +I  AL Y
Sbjct: 76  HSC-FQTESR--LF--FVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNY 125

Query: 199 IHN 201
           +H 
Sbjct: 126 LHE 128

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 26/119 (21%), Positives = 55/119 (46%), Gaps = 14/119 (11%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN--RELQI-MQMLDHPNIVALKH 142
            +G+G+ G V++ + R+TG ++A+K++      +  K    +L + ++  D P IV    
Sbjct: 32  EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            F + TD     + + +E +     ++     R+   +P   +   T  I +AL Y+  
Sbjct: 92  TFITNTD-----VFIAMELMGTCAEKL---KKRMQGPIPERILGKMTVAIVKALYYLKE 142

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 62.5 bits (152), Expect = 3e-11
 Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 14/124 (11%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVL-QDKRYKNRELQIMQM--LDHPNIVA-LKH 142
           +  +G G FG V++ K R  GE VA+K    +++R   RE +I Q   L H NI+  +  
Sbjct: 47  QESIGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA 104

Query: 143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
                    +L+  LV +Y    ++      Y+   + M    +KL        LA++H 
Sbjct: 105 DNKDNGTWTQLW--LVSDYHEHGSLFDYLNRYTVTVEGM----IKL-ALSTASGLAHLHM 157

Query: 202 CIVD 205
            IV 
Sbjct: 158 EIVG 161

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 19/129 (14%)

Query: 85  IAEHVVGTGSFGVVFQAKCRETGEI--VAIKKV---LQDKRYKN---RELQIMQMLDHPN 136
           + +  +G+G+FG V +   +    +  VA+K +     D   K+    E  +MQ LD+P 
Sbjct: 20  LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 79

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           IV +        + E     LV+E            Y + ++ +    +    +Q+   +
Sbjct: 80  IVRM----IGICEAESWM--LVMEMAE---LGPLNKYLQQNRHVKDKNIIELVHQVSMGM 130

Query: 197 AYI--HNCI 203
            Y+   N +
Sbjct: 131 KYLEESNFV 139

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 20/123 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQMLD-HPNIVAL 140
           V+G GSFG V  ++ + T E+ A+K      V+QD   +    E +++ +    P +  L
Sbjct: 27  VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             C F T D+  LY   V+EYV   + +  I +       R    +   Y  +I   L +
Sbjct: 87  HSC-FQTMDR--LY--FVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFF 136

Query: 199 IHN 201
           + +
Sbjct: 137 LQS 139

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 62.3 bits (152), Expect = 4e-11
 Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 12/120 (10%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN--RELQI-MQMLDHPNIVALKH 142
            +G G++G V +   + +G+I+A+K++   + +K  K    +L + M+  D P IV    
Sbjct: 29  EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARN-YSRIHQRMPLIYVKLYTYQICRALAYIHN 201
             F   D       + +E +  + ++  +  YS +   +P   +   T    +AL ++  
Sbjct: 89  ALFREGD-----CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 62.0 bits (151), Expect = 4e-11
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVL-QDKRYKNRELQIMQM--LDHPNIVA-LKH 142
             V   G FG V++A+     E VA+K    QDK+    E ++  +  + H NI+  +  
Sbjct: 29  LEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGA 86

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
               T+   +L+  L+  +          ++ + +         +    + R LAY+H  
Sbjct: 87  EKRGTSVDVDLW--LITAFHE---KGSLSDFLKANVVSWNELCHIA-ETMARGLAYLHED 140

Query: 203 IV 204
           I 
Sbjct: 141 IP 142

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 62.3 bits (152), Expect = 5e-11
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 20/123 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQM-LDHPNIVAL 140
           V+G GSFG V  A+ +ETG++ A+K      +LQD   +    E +I+ +  +HP +  L
Sbjct: 30  VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             C F T D+  L+   V+E+V   + +  I +      +R      + Y  +I  AL +
Sbjct: 90  FCC-FQTPDR--LF--FVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISALMF 139

Query: 199 IHN 201
           +H+
Sbjct: 140 LHD 142

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 61.9 bits (150), Expect = 5e-11
 Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 32/157 (20%)

Query: 78  SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQ 130
            ++  + +   V+G        +A  +ETGE   +      +R  +        E+  ++
Sbjct: 69  GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLR 128

Query: 131 ML-------------------------DHPNIVALKHCFFSTTDKEELYLNLVLEYVPET 165
           +L                             ++ ++            +L   ++   +T
Sbjct: 129 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 188

Query: 166 VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
              +  ++S  H+ +        T Q+ R LA +H+ 
Sbjct: 189 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 225

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 43.8 bits (103), Expect = 5e-05
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 243 HKVFQ--KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD 286
             +F+  K +P     L+  F +Y    R   L+A   P +++LR 
Sbjct: 323 EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 61.5 bits (150), Expect = 7e-11
 Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 20/123 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDKRYKN--RELQIMQM-LDHPNIVAL 140
           ++G GSFG VF A+ ++T +  AIK      VL D   +    E +++ +  +HP +  +
Sbjct: 24  MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
               F T +   L+   V+EY+   + +  I         +  L     Y  +I   L +
Sbjct: 84  FCT-FQTKEN--LF--FVMEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQF 133

Query: 199 IHN 201
           +H+
Sbjct: 134 LHS 136

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 60.7 bits (147), Expect = 1e-10
 Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 57/175 (32%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           +     +G G FGVVF+AK +      AIK++    R        RE++ +  L+HP IV
Sbjct: 8   FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67

Query: 139 ALKHCF----------------------------------------------------FS 146
              + +                                                      
Sbjct: 68  RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127

Query: 147 TTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
                ++YL + ++   +   +   N     +            QI  A+ ++H+
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS 182

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 24/124 (19%), Positives = 57/124 (45%), Gaps = 15/124 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKN--RELQIMQMLDHPNIV 138
           +     +G G+ GVVF+   + +G ++A K +   ++        RELQ++   + P IV
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
                F+S  +     +++ +E++   +++++ +   RI    P   +   +  + + L 
Sbjct: 95  GFYGAFYSDGE-----ISICMEHMDGGSLDQVLKKAGRI----PEQILGKVSIAVIKGLT 145

Query: 198 YIHN 201
           Y+  
Sbjct: 146 YLRE 149

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 20/124 (16%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
             ++G G FG V+  +       VAI+ +  ++  ++      RE+   +   H N+V  
Sbjct: 38  GELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94

Query: 141 K-HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
              C         L   ++       T+  + R+       + +   +    +I + + Y
Sbjct: 95  MGAC----MSPPHLA--IITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGY 145

Query: 199 IHNC 202
           +H  
Sbjct: 146 LHAK 149

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 60.0 bits (146), Expect = 2e-10
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 37/138 (26%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQML-----DHP 135
           ++    +G G+FG V   +  +  +  A+K V   K+Y      E  I++ +     ++ 
Sbjct: 37  FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN 96

Query: 136 NIVALKHCF---------FSTTDKEELYLNL--VLEYVPETVNRIARNYSRIHQRMPLIY 184
           NIV     F         F     E L  +L  ++            NY        +  
Sbjct: 97  NIVKYHGKFMYYDHMCLIF-----EPLGPSLYEIIT---------RNNY----NGFHIED 138

Query: 185 VKLYTYQICRALAYIHNC 202
           +KLY  +I +AL Y+   
Sbjct: 139 IKLYCIEILKALNYLRKM 156

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 17/96 (17%)

Query: 204 VDQLVEIIKVLGTPTREEI---------KCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEA 254
           ++ L  +  ++    +  +         K +N +  +  +P+           K+  P  
Sbjct: 265 MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLY 324

Query: 255 --------VDLVCRFFQYSPNLRCTALEACVHPFFD 282
                    D +    Q  P LR +  E   H F +
Sbjct: 325 KIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 15/130 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQML-----DHP 135
           YI    +G G F  V+ AK       VA+K V  DK Y      E++++Q +        
Sbjct: 21  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80

Query: 136 NIVALKHC-----FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTY 190
           + +   H       F+      +++ +V E + E +  + + Y   H+ +PLIYVK  + 
Sbjct: 81  DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISK 138

Query: 191 QICRALAYIH 200
           Q+   L Y+H
Sbjct: 139 QLLLGLDYMH 148

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 18/108 (16%), Positives = 29/108 (26%), Gaps = 15/108 (13%)

Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPP------------ 252
           D + +II++LG      ++        F   +       K+    L              
Sbjct: 248 DHIAQIIELLGELPSYLLR-NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 306

Query: 253 --EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLP 298
             E  D +    Q  P  R  A     HP+  +           R L 
Sbjct: 307 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELY 354

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
           E  +G G FG V+ A   +  + VA+K +            E  +M+ L H  +V L   
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI-- 199
                 KE +Y  ++ E++         ++ +  +       KL  ++ QI   +A+I  
Sbjct: 252 VT----KEPIY--IITEFMA---KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302

Query: 200 HNCI 203
            N I
Sbjct: 303 RNYI 306

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 59.3 bits (144), Expect = 3e-10
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 33/148 (22%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
             ++G G FG V +A+ ++       VA+K +  D    +      RE   M+  DHP++
Sbjct: 28  GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV 87

Query: 138 VALKH-CFFSTTDKEELYLNLVLEYVPE-------TVNRIARNYSRIHQRMPLIYVKLYT 189
             L      S          ++L ++           +RI  N   +  +  L+    + 
Sbjct: 88  AKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT-LVR---FM 143

Query: 190 YQICRALAY------IH------NCIVD 205
             I   + Y      IH      NC++ 
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLA 171

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 59.8 bits (145), Expect = 4e-10
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
           E  +G G FG V+      T   VAIK +           +E Q+M+ L H  +V L   
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--- 244

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI-- 199
            ++   +E +Y  +V EY+         ++ +      L   +L     QI   +AY+  
Sbjct: 245 -YAVVSEEPIY--IVTEYMS---KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298

Query: 200 HNCI 203
            N +
Sbjct: 299 MNYV 302

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 38/139 (27%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQML------DH 134
           Y    V+G GSFG V +A   +  + VA+K V  +KR+      E++I++ L      + 
Sbjct: 99  YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158

Query: 135 PNIVALKHCF---------FSTTDKEELYLNL--VLEYVPETVNRIARNYSRIHQRMPLI 183
            N++ +   F         F     E L +NL  +++      N+         Q   L 
Sbjct: 159 MNVIHMLENFTFRNHICMTF-----ELLSMNLYELIKK-----NK--------FQGFSLP 200

Query: 184 YVKLYTYQICRALAYIHNC 202
            V+ + + I + L  +H  
Sbjct: 201 LVRKFAHSILQCLDALHKN 219

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 30/110 (27%)

Query: 204 VDQLVEIIKVLGTPTREEIK-----------CMNPNYTEFKF---------------PQI 237
            DQL  +I++LG P+++ +               P Y                     ++
Sbjct: 305 GDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKL 364

Query: 238 KPHPWHKVFQKRLPPEA----VDLVCRFFQYSPNLRCTALEACVHPFFDE 283
           +  P  + +   L        +D + +  ++ P +R T  +A  HP+   
Sbjct: 365 RGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 59.6 bits (145), Expect = 4e-10
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 20/127 (15%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIVALK 141
              +G G+FG VF  + R    +VA+K   +      +     E +I++   HPNIV L 
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL- 177

Query: 142 H--CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL-YTYQICRALAY 198
              C    T K+ +Y  +V+E V          + R       +   L         + Y
Sbjct: 178 IGVC----TQKQPIY--IVMELVQ---GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEY 228

Query: 199 IH--NCI 203
           +    CI
Sbjct: 229 LESKCCI 235

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 17/124 (13%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
              +G G FG V+        + VA+K + Q     +    E  +M+ L H  +V L   
Sbjct: 18  VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--- 73

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI-- 199
            ++   +E +Y  ++ EY+    N    ++ +    + L   KL     QI   +A+I  
Sbjct: 74  -YAVVTQEPIY--IITEYME---NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127

Query: 200 HNCI 203
            N I
Sbjct: 128 RNYI 131

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 24/127 (18%)

Query: 89  VVGTGSFGVVFQAK---CRETGEIVAIK-----KVLQDKRYKNR---ELQIMQMLDH-PN 136
           V+GTG++G VF  +     +TG++ A+K      ++Q  +       E Q+++ +   P 
Sbjct: 61  VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           +V L +  F T  K  L+  L+L+Y+   E    +++      +R     V++Y  +I  
Sbjct: 121 LVTLHYA-FQTETK--LH--LILDYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVL 170

Query: 195 ALAYIHN 201
           AL ++H 
Sbjct: 171 ALEHLHK 177

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 58.5 bits (142), Expect = 6e-10
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 23/130 (17%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
             V+G+G+FG V++      GE     VAIK++ +    K       E  +M  +D+P++
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV 79

Query: 138 VALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRA 195
             L   C         +   L+ + +P        +Y R H+  +   Y+  +  QI + 
Sbjct: 80  CRLLGICL-----TSTVQ--LITQLMP---FGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129

Query: 196 LAYI--HNCI 203
           + Y+     +
Sbjct: 130 MNYLEDRRLV 139

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 59.1 bits (143), Expect = 6e-10
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHC 143
           E  +G G FG V+      T   VAIK +           +E Q+M+ L H  +V L   
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--- 327

Query: 144 FFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL--YTYQICRALAYI-- 199
            ++   +E +Y  +V EY+         ++ +      L   +L     QI   +AY+  
Sbjct: 328 -YAVVSEEPIY--IVTEYMS---KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 381

Query: 200 HNCI 203
            N +
Sbjct: 382 MNYV 385

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 59.5 bits (144), Expect = 6e-10
 Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 36/170 (21%)

Query: 49  RDSEPDIIDGVGAETGH--------VIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQ 100
                   +G     G              + G+         Y  +  +  G  G ++ 
Sbjct: 48  DSETKGASEGWCPYCGSPYSFLPQLNPGDIVAGQ---------YEVKGCIAHGGLGWIYL 98

Query: 101 AKCRE-TGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE 152
           A  R   G  V +K  L               E Q +  + HP+IV +   F   TD+  
Sbjct: 99  ALDRNVNGRPVVLK-GLVHSGDAEAQAMAM-AERQFLAEVVHPSIVQI-FNFVEHTDRHG 155

Query: 153 LYLN-LVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
             +  +V+EYV  +++ R         Q++P+     Y  +I  AL+Y+H
Sbjct: 156 DPVGYIVMEYVGGQSLKRS------KGQKLPVAEAIAYLLEILPALSYLH 199

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.1 bits (141), Expect = 7e-10
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
              +G+GSFG V++ K       VA+K +               E+ +++   H NI+  
Sbjct: 29  GQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL- 84

Query: 141 KHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
              F   +   +L   +V ++    ++            +  +  +     Q  R + Y+
Sbjct: 85  ---FMGYSTAPQLA--IVTQWCEGSSLYHHLHASET---KFEMKKLIDIARQTARGMDYL 136

Query: 200 HNC 202
           H  
Sbjct: 137 HAK 139

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 58.0 bits (141), Expect = 7e-10
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 19/129 (14%)

Query: 85  IAEHVVGTGSFGVVFQAKCRETGEI--VAIKKVLQDKRYKNR-----ELQIMQMLDHPNI 137
           IA+  +G G+FG V Q   R   +   VAIK + Q     +      E QIM  LD+P I
Sbjct: 13  IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
           V L          E L   LV+E            +    +  +P+  V    +Q+   +
Sbjct: 73  VRL----IGVCQAEALM--LVMEMAG---GGPLHKFLVGKREEIPVSNVAELLHQVSMGM 123

Query: 197 AYI--HNCI 203
            Y+   N +
Sbjct: 124 KYLEEKNFV 132

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 58.1 bits (141), Expect = 8e-10
 Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 32/147 (21%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
             ++G G FG V +   ++       VA+K +  D   +        E   M+   HPN+
Sbjct: 39  GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPE-------TVNRIARNYSRIHQRMPLIYVKLYTY 190
           + L       + +      ++L ++           +R+      I  +  L+    +  
Sbjct: 99  IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQT-LLK---FMV 154

Query: 191 QICRALAY------IH------NCIVD 205
            I   + Y      +H      NC++ 
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLR 181

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 57.6 bits (140), Expect = 9e-10
 Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 30/147 (20%)

Query: 65  HVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------ 118
           H+I   I  R         Y     +G G    V+ A+       VAI K +        
Sbjct: 3   HMIGKIINER---------YKIVDKLGGGGMSTVYLAEDTILNIKVAI-KAIFIPPREKE 52

Query: 119 ---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYS 174
              KR++ RE+     L H NIV++        + +  Y  LV+EY+   T+      Y 
Sbjct: 53  ETLKRFE-REVHNSSQLSHQNIVSM---IDVDEEDDCYY--LVMEYIEGPTL----SEYI 102

Query: 175 RIHQRMPLIYVKLYTYQICRALAYIHN 201
             H  + +     +T QI   + + H+
Sbjct: 103 ESHGPLSVDTAINFTNQILDGIKHAHD 129

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 58.9 bits (142), Expect = 1e-09
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 20/123 (16%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIK-----KVLQDK--RYKNRELQIMQM-LDHPNIVAL 140
           V+G GSFG V  ++ + T E+ A+K      V+QD        E +++ +    P +  L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
             C F T D+  LY   V+EYV   + +  I +       R    +   Y  +I   L +
Sbjct: 408 HSC-FQTMDR--LY--FVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFF 457

Query: 199 IHN 201
           + +
Sbjct: 458 LQS 460

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 57.7 bits (140), Expect = 1e-09
 Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 21/129 (16%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
             V+G+G FG V +      GE     V IK +      ++       +  +  LDH +I
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
           V L            L   LV +Y+P        ++ R H+  +    +  +  QI + +
Sbjct: 78  VRL----LGLCPGSSLQ--LVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128

Query: 197 AYI--HNCI 203
            Y+  H  +
Sbjct: 129 YYLEEHGMV 137

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 19/129 (14%)

Query: 85  IAEHVVGTGSFGVVFQAKCR-ETGEI-VAIKKVLQDKRYKNR-----ELQIMQMLDHPNI 137
           IA+  +G G+FG V Q   R    +I VAIK + Q     +      E QIM  LD+P I
Sbjct: 339 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
           V L          E L   LV+E            +    +  +P+  V    +Q+   +
Sbjct: 399 VRL----IGVCQAEALM--LVMEMAG---GGPLHKFLVGKREEIPVSNVAELLHQVSMGM 449

Query: 197 AYI--HNCI 203
            Y+   N +
Sbjct: 450 KYLEEKNFV 458

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 57.3 bits (139), Expect = 1e-09
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 34/145 (23%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI-------VAIKKVLQDKRYKN----RELQIMQMLDHP 135
              +G G+F  +F+   RE G+        V +K + +  R  +        +M  L H 
Sbjct: 13  NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72

Query: 136 NIVALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL-YTYQIC 193
           ++V     C       +E    LV E+V          Y + ++    I  KL    Q+ 
Sbjct: 73  HLVLNYGVC----VCGDENI--LVQEFVK---FGSLDTYLKKNKNCINILWKLEVAKQLA 123

Query: 194 RALAY------IH------NCIVDQ 206
            A+ +      IH      N ++ +
Sbjct: 124 AAMHFLEENTLIHGNVCAKNILLIR 148

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 27/136 (19%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKH- 142
              +G+G FG+V         + VAIK + +    +     E ++M  L HP +V L   
Sbjct: 13  VQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY-TYQICRALAY--- 198
           C     ++  +   LV E++    +    +Y R  + +      L     +C  +AY   
Sbjct: 72  C----LEQAPIC--LVTEFME---HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122

Query: 199 ---IH------NCIVD 205
              IH      NC+V 
Sbjct: 123 ACVIHRDLAARNCLVG 138

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 27/137 (19%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKH- 142
              +G+G FGVV   K +   + VA+K + +    ++   +E Q M  L HP +V     
Sbjct: 13  LKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY-TYQICRALAY--- 198
           C    + +  +Y  +V EY+    N    NY R H +       L   Y +C  +A+   
Sbjct: 72  C----SKEYPIY--IVTEYIS---NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122

Query: 199 ---IH------NCIVDQ 206
              IH      NC+VD+
Sbjct: 123 HQFIHRDLAARNCLVDR 139

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 30/140 (21%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
             ++G G FG V++            VA+K   +D    N+     E  IM+ LDHP+IV
Sbjct: 17  NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALA 197
            L        ++E  +  +++E  P        +Y   ++  + ++ + LY+ QIC+A+A
Sbjct: 77  KL----IGIIEEEPTW--IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMA 127

Query: 198 Y------IH------NCIVD 205
           Y      +H      N +V 
Sbjct: 128 YLESINCVHRDIAVRNILVA 147

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 27/137 (19%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKH- 142
              +GTG FGVV   K R   + VAIK + +    ++    E ++M  L H  +V L   
Sbjct: 29  LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87

Query: 143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY-TYQICRALAY--- 198
           C    T +  ++  ++ EY+    N    NY R  +        L     +C A+ Y   
Sbjct: 88  C----TKQRPIF--IITEYMA---NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138

Query: 199 ---IH------NCIVDQ 206
              +H      NC+V+ 
Sbjct: 139 KQFLHRDLAARNCLVND 155

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 28/140 (20%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIK--KVLQDKRYKN---RELQIMQMLDHPNIV 138
             V+G G FG V+     +        A+K    + D    +    E  IM+   HPN++
Sbjct: 30  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL-YTYQICRALA 197
           +L         +      +VL Y+    +   RN+ R     P +   + +  Q+ + + 
Sbjct: 90  SLLGI--CLRSEGSPL--VVLPYMK---HGDLRNFIRNETHNPTVKDLIGFGLQVAKGMK 142

Query: 198 Y------IH------NCIVD 205
           Y      +H      NC++D
Sbjct: 143 YLASKKFVHRDLAARNCMLD 162

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 34/142 (23%), Positives = 51/142 (35%), Gaps = 31/142 (21%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
           E ++G+G  G V   + R  G+    VAIK +      + R     E  IM   DHPNI+
Sbjct: 54  EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113

Query: 139 ALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKL-YTYQICRAL 196
            L+       T        +V EY+    N     + R H     I   +     +   +
Sbjct: 114 RLEGVV----TRGRLAM--IVTEYME---NGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164

Query: 197 AY------IH------NCIVDQ 206
            Y      +H      N +VD 
Sbjct: 165 RYLSDLGYVHRDLAARNVLVDS 186

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 34/144 (23%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIK--KVLQDKRYKN---RELQIMQMLDHPNIV 138
             V+G G FG V+     +        A+K    + D    +    E  IM+   HPN++
Sbjct: 94  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMP----LIYVKLYTYQICR 194
           +L         +      +VL Y+    +   RN+ R     P    LI    +  Q+ +
Sbjct: 154 SLLGI--CLRSEGSPL--VVLPYMK---HGDLRNFIRNETHNPTVKDLIG---FGLQVAK 203

Query: 195 ALAY------IH------NCIVDQ 206
            + +      +H      NC++D+
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDE 227

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 54.9 bits (133), Expect = 8e-09
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 30/147 (20%)

Query: 67  IRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL-----QDKRY 121
             + +  R         Y    ++G G    V  A+       VA+ KVL     +D  +
Sbjct: 6   TPSHLSDR---------YELGEILGFGGMSEVHLARDLRDHRDVAV-KVLRADLARDPSF 55

Query: 122 KNR---ELQIMQMLDHPNIVALKHCFF---STTDKEELYLNLVLEYVP-ETVNRIARNYS 174
             R   E Q    L+HP IVA+    +              +V+EYV   T+    R+  
Sbjct: 56  YLRFRREAQNAAALNHPAIVAV----YDTGEAETPAGPLPYIVMEYVDGVTL----RDIV 107

Query: 175 RIHQRMPLIYVKLYTYQICRALAYIHN 201
                M            C+AL + H 
Sbjct: 108 HTEGPMTPKRAIEVIADACQALNFSHQ 134

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 33/138 (23%), Positives = 53/138 (38%), Gaps = 38/138 (27%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQML------DH 134
           Y  + ++G GSFG V +A  R   E VAIK +   K + N    E+++++++        
Sbjct: 56  YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMK 115

Query: 135 PNIVALKHCF---------FSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQR--MPLI 183
             IV LK  F         F     E L  NL              +  R      + L 
Sbjct: 116 YYIVHLKRHFMFRNHLCLVF-----EMLSYNL-------------YDLLRNTNFRGVSLN 157

Query: 184 YVKLYTYQICRALAYIHN 201
             + +  Q+C AL ++  
Sbjct: 158 LTRKFAQQMCTALLFLAT 175

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 34/144 (23%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE---IVAIK--KVLQDKRYKN---RELQIMQMLDHPNIV 138
           + V+G G FGVV+  +  +  +     AIK    + + +      RE  +M+ L+HPN++
Sbjct: 26  DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMP----LIYVKLYTYQICR 194
           AL          E L   ++L Y+    +     + R  QR P    LI    +  Q+ R
Sbjct: 86  ALIGI---MLPPEGLPH-VLLPYMC---HGDLLQFIRSPQRNPTVKDLIS---FGLQVAR 135

Query: 195 ALAY------IH------NCIVDQ 206
            + Y      +H      NC++D+
Sbjct: 136 GMEYLAEQKFVHRDLAARNCMLDE 159

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 27/224 (12%), Positives = 66/224 (29%), Gaps = 41/224 (18%)

Query: 13  SSRSVNGFKSSSSSVDWLGREMLEMRLRDQVDNDEDRDSEPD--IIDGVGAETGHV-IRT 69
            +    GF+ +      +      +   +     E   S  D  +   +        + +
Sbjct: 12  ENLYFQGFRGTDPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVES 71

Query: 70  TIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------ 123
            +G R        + +   V+G        +A  +ETGE   +      +R  +      
Sbjct: 72  ELGER------PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQM 125

Query: 124 -RELQIMQML-------------------------DHPNIVALKHCFFSTTDKEELYLNL 157
             E+  +++L                             ++ ++            +L  
Sbjct: 126 KEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYP 185

Query: 158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 201
            ++   +T   +  ++S  H+ +        T Q+ R LA +H+
Sbjct: 186 RMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH 229

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 48.9 bits (116), Expect = 1e-06
 Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 5/78 (6%)

Query: 243 HKVFQ--KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD---PNTRLPNGRPL 297
             +F+  K +P     L+  F +Y    R   L+A   P +++LR        L      
Sbjct: 327 EWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGE 386

Query: 298 PPLFNFKPPELSGIPPET 315
           P      PP  +  P E 
Sbjct: 387 PTREGGAPPSGTSQPDEA 404

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 26/162 (16%), Positives = 50/162 (30%), Gaps = 48/162 (29%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPN 136
              +G G FG V +A             VA+K +       + R    E  +++ ++HP+
Sbjct: 28  GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPH 87

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP-------------------ETVNRIARNYSRIH 177
           ++ L       +    L   L++EY                      +      +     
Sbjct: 88  VIKLYGA---CSQDGPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142

Query: 178 QRMPLIYVKL--YTYQICRALAY------IH------NCIVD 205
               L    L  + +QI + + Y      +H      N +V 
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA 184

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 39/140 (27%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETG-EIVAIKKVLQDKRYKN---RELQIMQML------D 133
           Y     +G G+FG V +      G   VA+K +    +Y+     E+ +++ +      +
Sbjct: 21  YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKEN 80

Query: 134 HPNIVALKHCF---------FSTTDKEELYLNL--VLEYVPETVNRIARNYSRIHQRMPL 182
               V +   F         F     E L  N    L+           N+    Q  PL
Sbjct: 81  KFLCVLMSDWFNFHGHMCIAF-----ELLGKNTFEFLK---------ENNF----QPYPL 122

Query: 183 IYVKLYTYQICRALAYIHNC 202
            +V+   YQ+C AL ++H  
Sbjct: 123 PHVRHMAYQLCHALRFLHEN 142

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 22/107 (20%), Positives = 34/107 (31%), Gaps = 15/107 (14%)

Query: 205 DQLVEIIKVLGTPTREEIKCM---------NPNYTEFKFPQIKPHPWHKVFQKRLPPEA- 254
           + LV + K+LG      I               + E            K  +  +  ++ 
Sbjct: 246 EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSL 305

Query: 255 -----VDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP 296
                 DL+ R  ++ P  R T  EA +HPFF  L          R 
Sbjct: 306 EHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRN 352

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 22/130 (16%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
              +G GSFGVV + +          VA+K +  D   +        RE+  M  LDH N
Sbjct: 23  LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRA 195
           ++ L    +       +   +V E  P        +  R HQ    L  +  Y  Q+   
Sbjct: 83  LIRL----YGVVLTPPMK--MVTELAP---LGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133

Query: 196 LAYI--HNCI 203
           + Y+     I
Sbjct: 134 MGYLESKRFI 143

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 33/141 (23%)

Query: 91  GTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQML-DHPNIVA 139
           G G+FG V +A        +    VA+K +     L ++     EL+++  L +H NIV 
Sbjct: 32  GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN 91

Query: 140 LKHCFFSTTDKEELYLNLVLEYV-------------PETVNRIARNYSRIHQRMPLIYVK 186
           L       T        ++ EY                 +             + L    
Sbjct: 92  LLGA---CTIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 187 LYT--YQICRALAYI--HNCI 203
           L +  YQ+ + +A++   NCI
Sbjct: 147 LLSFSYQVAKGMAFLASKNCI 167

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 54.3 bits (131), Expect = 2e-08
 Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 31/142 (21%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
           + VVG G FG V   + +   +    VAIK +      K R     E  IM   DHPNI+
Sbjct: 50  DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109

Query: 139 ALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRAL 196
            L+       T  + +   +V EY+    N    ++ R H  +  +I +      I   +
Sbjct: 110 RLEGVV----TKSKPVM--IVTEYME---NGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160

Query: 197 AY------IH------NCIVDQ 206
            Y      +H      N +++ 
Sbjct: 161 KYLSDMGYVHRDLAARNILINS 182

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 34/158 (21%), Positives = 58/158 (36%), Gaps = 42/158 (26%)

Query: 91  GTGSFGVVFQAKCRETGE-----IVAIKKV----LQDKRYKNRELQIMQMLDHPNIVALK 141
           G G+FG VF A+C          +VA+K +    L  ++   RE +++  L H +IV   
Sbjct: 24  GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 83

Query: 142 HCFFSTTDKEELYLNLVLEYVP-----------ETVNRIARNYSRIHQRMPLIYVKLY-- 188
                  D + L   +V EY+                 I  +      +  L   ++   
Sbjct: 84  GV---CGDGDPLI--MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138

Query: 189 TYQICRALAY------IH------NCIV-DQLVEIIKV 213
             QI   + Y      +H      NC+V   L+  +K+
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLL--VKI 174

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 39/140 (27%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETG-EIVAIKKVLQDKRYKN---RELQIMQML------D 133
           Y     +G G+FG V +    + G   VA+K V    RY      E+Q+++ L       
Sbjct: 16  YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNS 75

Query: 134 HPNIVALKHCF---------FSTTDKEELYLNL--VLEYVPETVNRIARNYSRIHQRMPL 182
               V +   F         F     E L L+    ++            +        L
Sbjct: 76  TFRCVQMLEWFEHHGHICIVF-----ELLGLSTYDFIK---------ENGF----LPFRL 117

Query: 183 IYVKLYTYQICRALAYIHNC 202
            +++   YQIC+++ ++H+ 
Sbjct: 118 DHIRKMAYQICKSVNFLHSN 137

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 15/98 (15%)

Query: 205 DQLVEIIKVLGTPTREEIK---------CMNPNYTEFKFPQIKPHPWHKVFQKRLPPE-- 253
           + L  + ++LG   +  I+             ++ E            K  ++ +  +  
Sbjct: 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300

Query: 254 ----AVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
                 DL+ +  +Y P  R T  EA  HPFFD L+  
Sbjct: 301 EHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 53.5 bits (129), Expect = 3e-08
 Identities = 26/155 (16%), Positives = 52/155 (33%), Gaps = 33/155 (21%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPN 136
              +G G+FG V++ +        +   VA+K +      QD+     E  I+   +H N
Sbjct: 35  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPE----TVNRIARNYSRIHQRMPLIYVKLYTYQI 192
           IV        +      +  +++E +      +  R  R        + ++ +      I
Sbjct: 95  IVRCIGV---SLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149

Query: 193 CRALAY------IH------NCIVDQLVE--IIKV 213
                Y      IH      NC++       + K+
Sbjct: 150 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 184

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 53.7 bits (129), Expect = 4e-08
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 20/128 (15%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
              +G G FG V Q            VAIK          R     E   M+  DHP+IV
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALA 197
            L         +  ++  +++E          R++ ++ +  + L  + LY YQ+  ALA
Sbjct: 455 KL----IGVITENPVW--IIMELCT---LGELRSFLQVRKFSLDLASLILYAYQLSTALA 505

Query: 198 YI--HNCI 203
           Y+     +
Sbjct: 506 YLESKRFV 513

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 33/155 (21%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPN 136
              +G G+FG V++ +        +   VA+K +      QD+     E  I+   +H N
Sbjct: 76  IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 135

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPE----TVNRIARNYSRIHQRMPLIYVKLYTYQI 192
           IV        +      +  ++LE +      +  R  R        + ++ +      I
Sbjct: 136 IVRCIGV---SLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190

Query: 193 CRALAY------IH------NCIVDQLVE--IIKV 213
                Y      IH      NC++       + K+
Sbjct: 191 ACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI 225

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 52.3 bits (126), Expect = 6e-08
 Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 30/142 (21%)

Query: 88  HVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLD-HPN 136
             +G G+FG V +A         T   VA+K +       + R    EL+I+  +  H N
Sbjct: 33  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYV-------------PETVNRIARNYSRIHQRMPLI 183
           +V L      T     L   +++E+               E V             + L 
Sbjct: 93  VVNLLGA--CTKPGGPLM--VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148

Query: 184 YVKLYTYQICRALAYI--HNCI 203
           ++  Y++Q+ + + ++    CI
Sbjct: 149 HLICYSFQVAKGMEFLASRKCI 170

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 52.2 bits (126), Expect = 6e-08
 Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 20/128 (15%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI---VAIKKVLQDKRYKNR-----ELQIMQMLDHPNIV 138
              +G G FG V Q            VAIK          R     E   M+  DHP+IV
Sbjct: 20  GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 79

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRALA 197
            L         +  ++  +++E          R++ ++ +  + L  + LY YQ+  ALA
Sbjct: 80  KL----IGVITENPVW--IIMELCT---LGELRSFLQVRKYSLDLASLILYAYQLSTALA 130

Query: 198 YI--HNCI 203
           Y+     +
Sbjct: 131 YLESKRFV 138

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 52.3 bits (126), Expect = 6e-08
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 32/143 (22%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI----VAIKKVLQDKRYKNR-----ELQIMQMLDHPNI 137
           + V+G G FG V++   + +       VAIK +      K R     E  IM    H NI
Sbjct: 49  QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108

Query: 138 VALKH-CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQ-RMPLIYVKLYTYQICRA 195
           + L+       +  + +   ++ EY+    N     + R       ++ +      I   
Sbjct: 109 IRLEGVI----SKYKPMM--IITEYME---NGALDKFLREKDGEFSVLQLVGMLRGIAAG 159

Query: 196 LAY------IH------NCIVDQ 206
           + Y      +H      N +V+ 
Sbjct: 160 MKYLANMNYVHRDLAARNILVNS 182

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 51.9 bits (125), Expect = 9e-08
 Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 29/166 (17%)

Query: 44  DNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKC 103
            +             +         T  G           Y    +VG G  G V++A+ 
Sbjct: 6   HHHHHSSGLVPRGSHMDGTAESREGTQFGP----------YRLRRLVGRGGMGDVYEAED 55

Query: 104 RETGEIVAIKKVL-----QDKRYK---NRELQIMQMLDHPNIVALKHCFFSTTDKEELYL 155
                IVA+ K++      D  ++    RE +    L  P++V +           +LY 
Sbjct: 56  TVRERIVAL-KLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI---HDFGEIDGQLY- 110

Query: 156 NLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            + +  +             R    +          QI  AL   H
Sbjct: 111 -VDMRLINGVD----LAAMLRRQGPLAPPRAVAIVRQIGSALDAAH 151

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 51.9 bits (125), Expect = 9e-08
 Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 13/85 (15%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE--IVAIKKV-----LQDKRYKNRELQIMQML-DHPNIV 138
           + V+G G+FG V +A+ ++ G     AIK++       D R    EL+++  L  HPNI+
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP 163
            L         +  LY  L +EY P
Sbjct: 90  NLLGA---CEHRGYLY--LAIEYAP 109

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 34/148 (22%)

Query: 88  HVVGTGSFGVVFQAKCRETGE-----IVAIKKV-----LQDKRYKNRELQIMQMLDHPNI 137
             +G GSFG+V++   +   +      VAIK V     ++++     E  +M+  +  ++
Sbjct: 31  RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPE-------TVNRIARNYSRIHQRMPLIYVKLYTY 190
           V L       +  +     +++E +            R A   + +     L  +     
Sbjct: 91  VRLLGV---VSQGQPTL--VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145

Query: 191 QICRALAY------IH------NCIVDQ 206
           +I   +AY      +H      NC+V +
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAE 173

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 51/171 (29%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPN 136
              +G G+FG VFQA+       E   +VA+K +        +    RE  +M   D+PN
Sbjct: 52  VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP-------------------ETVNRIARNYSRIH 177
           IV L          + +   L+ EY+                       +   R      
Sbjct: 112 IVKLLGV---CAVGKPMC--LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166

Query: 178 QRMPLIYVKL--YTYQICRALAY------IH------NCIV-DQLVEIIKV 213
              PL   +      Q+   +AY      +H      NC+V + +V  +K+
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMV--VKI 215

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 35/161 (21%), Positives = 59/161 (36%), Gaps = 41/161 (25%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE-----IVAIKKV----LQDKRYKNRELQIMQMLDHPNI 137
           +  +G G+FG VF A+C          +VA+K +       ++   RE +++ ML H +I
Sbjct: 46  KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI 105

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP----------ETVNRIARNYSRIHQRMPLIYVKL 187
           V         T+   L   +V EY+              +             PL   +L
Sbjct: 106 VRFFGV---CTEGRPLL--MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160

Query: 188 --YTYQICRALAY------IH------NCIV-DQLVEIIKV 213
                Q+   + Y      +H      NC+V   LV  +K+
Sbjct: 161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV--VKI 199

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 30/150 (20%), Positives = 51/150 (34%), Gaps = 38/150 (25%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQML-DHP 135
             V+G+G+FG V  A             VA+K +       ++     EL++M  L  H 
Sbjct: 50  GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVP------------------ETVNRIARNYSRIH 177
           NIV L       T    +Y  L+ EY                    E      +      
Sbjct: 110 NIVNLLGA---CTLSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164

Query: 178 QRMPLIYVKL--YTYQICRALAYI--HNCI 203
               L +  L  + YQ+ + + ++   +C+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 29/141 (20%)

Query: 87  EHVVGTGSFGVVFQAKCRETGE-----IVAIKKV-----LQDKRYKNRELQIMQMLD-HP 135
              +G G+FG V +A     G+      VA+K +       +K     EL+IM  L  H 
Sbjct: 51  GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE 110

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVP---------ETVNRIARNYSRIHQRMPLIYVK 186
           NIV L       T    +   ++ EY                +  + +            
Sbjct: 111 NIVNLLGA---CTHGGPVL--VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165

Query: 187 L--YTYQICRALAYI--HNCI 203
           L  ++ Q+ + +A++   NCI
Sbjct: 166 LLHFSSQVAQGMAFLASKNCI 186

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 50.1 bits (120), Expect = 5e-07
 Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 33/145 (22%)

Query: 87  EHVVGTGSFGVVFQAKCR-------ETGEIVAIKKV-----LQDKRYKNRELQIMQML-D 133
              +G G+FG V  A+              VA+K +      +D      E+++M+M+  
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVP-----------ETVNRIARNYSRIHQRMPL 182
           H NI+ L       T    LY  +++EY                          +    L
Sbjct: 134 HKNIINLLGA---CTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188

Query: 183 IYVKL--YTYQICRALAYI--HNCI 203
               L    YQ+ R + Y+    CI
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCI 213

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 49.3 bits (118), Expect = 8e-07
 Identities = 30/145 (20%), Positives = 51/145 (35%), Gaps = 33/145 (22%)

Query: 87  EHVVGTGSFGVVFQAKCR-------ETGEIVAIKKV-----LQDKRYKNRELQIMQML-D 133
              +G G FG V  A+         +    VA+K +      +D      E+++M+M+  
Sbjct: 86  GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 145

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPE-----------TVNRIARNYSRIHQRMPL 182
           H NI+ L       T    LY  +++EY  +                            +
Sbjct: 146 HKNIINLLGA---CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200

Query: 183 IYVKL--YTYQICRALAYI--HNCI 203
            +  L   TYQ+ R + Y+    CI
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCI 225

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 48.7 bits (117), Expect = 9e-07
 Identities = 29/163 (17%), Positives = 49/163 (30%), Gaps = 43/163 (26%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLDHPN 136
              +G   FG V++         E  + VAIK +        +     E  +   L HPN
Sbjct: 14  MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVP-----------ETVNRIARNYSRIHQRMPLIYV 185
           +V L       T  + L   ++  Y                + +         +  L   
Sbjct: 74  VVCLLGV---VTKDQPLS--MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128

Query: 186 KL--YTYQICRALAY------IH------NCIV-DQLVEIIKV 213
                  QI   + Y      +H      N +V D+L   +K+
Sbjct: 129 DFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN--VKI 169

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 48.8 bits (116), Expect = 1e-06
 Identities = 36/203 (17%), Positives = 65/203 (32%), Gaps = 24/203 (11%)

Query: 87  EHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLD-HP 135
              +G G+FG V +A         T   VA+K +       + R    EL+I+  +  H 
Sbjct: 27  GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 86

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           N+V L      T     L   +++E+           Y R   R   +  K    +  + 
Sbjct: 87  NVVNLLGA--CTKPGGPLM--VIVEFCK---FGNLSTYLRSK-RNEFVPYKTKGARFRQG 138

Query: 196 LAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAV 255
             Y+    VD    +  +  + +      +          +  P         +      
Sbjct: 139 KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPE-----DLYKDFLTLE 193

Query: 256 DLVCRFFQYSPNLRCTALEACVH 278
            L+C  FQ +  +   A   C+H
Sbjct: 194 HLICYSFQVAKGMEFLASRKCIH 216

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 11/121 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDH-PNIVAL 140
           Y     +G GSFGV+F+       + VAIK   +         E +  ++L     I  +
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            +       +E L+  LV++ +  ++  +     R   +  +  V +   Q+   +  IH
Sbjct: 72  YYF-----GQEGLHNVLVIDLLGPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIH 123

Query: 201 N 201
            
Sbjct: 124 E 124

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 32/157 (20%), Positives = 54/157 (34%), Gaps = 43/157 (27%)

Query: 87  EHVVGTGSFGVVFQAKCR-------ETGEIVAIKKV-----LQDKRYKNRELQIMQML-D 133
              +G G+FG V  A+         +    VA+K +      +D      E+++M+M+  
Sbjct: 40  GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPE-----------TVNRIARNYSRIHQRMPL 182
           H NI+ L       T    LY  +++EY  +                            +
Sbjct: 100 HKNIINLLGA---CTQDGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 183 IYVKL--YTYQICRALAY------IH------NCIVD 205
            +  L   TYQ+ R + Y      IH      N +V 
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT 191

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIK--KVLQDKRYKNRELQIMQMLDH-PNIVAL 140
           +     +G G+FG +   K   T E VAIK   +       + E +  + L     I  +
Sbjct: 11  FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            +           Y  +VLE +  ++  +     R      L  V +   Q+   + Y+H
Sbjct: 71  YYF-----GPCGKYNAMVLELLGPSLEDLFDLCDR---TFSLKTVLMIAIQLISRMEYVH 122

Query: 201 N 201
           +
Sbjct: 123 S 123

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 11/121 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDH-PNIVAL 140
           Y     +G+GSFG ++       GE VAIK      ++     E +I +M+     I  +
Sbjct: 11  YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTI 70

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           + C       E  Y  +V+E +  ++  +    SR   +  L  V L   Q+   + YIH
Sbjct: 71  RWC-----GAEGDYNVMVMELLGPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIH 122

Query: 201 N 201
           +
Sbjct: 123 S 123

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 45.3 bits (107), Expect = 2e-05
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 14/128 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQML-----DHP 135
           Y     +G G F  V+ +   +  + VA+K V   + Y      E+++++ +     + P
Sbjct: 39  YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98

Query: 136 N---IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQI 192
           N   +V L    F  +     ++ +V E +   + +     +  +Q +PL  VK    Q+
Sbjct: 99  NREMVVQLLDD-FKISGVNGTHICMVFEVLGHHLLKWIIKSN--YQGLPLPCVKKIIQQV 155

Query: 193 CRALAYIH 200
            + L Y+H
Sbjct: 156 LQGLDYLH 163

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 45.4 bits (107), Expect = 2e-05
 Identities = 23/121 (19%), Positives = 53/121 (43%), Gaps = 11/121 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQML-DHPNIVAL 140
           +     +G+GSFG ++     +T E VAIK      ++     E +I ++L     I  +
Sbjct: 9   FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNV 68

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
           +         E  Y  LV++ +  ++  +   ++   +++ L  V +   Q+   + ++H
Sbjct: 69  RWF-----GVEGDYNVLVMDLLGPSLEDL---FNFCSRKLSLKTVLMLADQMINRVEFVH 120

Query: 201 N 201
           +
Sbjct: 121 S 121

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 43.7 bits (104), Expect = 4e-05
 Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 24/130 (18%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNR----ELQIMQMLDHPNIVAL-K 141
           + ++G G FG V++   R+ G  VA+K+   +          E++ +    HP++V+L  
Sbjct: 44  KFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARN--YSRIHQRMPLIYVKLYTYQIC----RA 195
            C       E   + L+ +Y+    N   +   Y      M + + +    +IC    R 
Sbjct: 103 FC------DERNEMILIYKYME---NGNLKRHLYGSDLPTMSMSWEQ--RLEICIGAARG 151

Query: 196 LAYIHN-CIV 204
           L Y+H   I+
Sbjct: 152 LHYLHTRAII 161

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 20/159 (12%), Positives = 35/159 (22%), Gaps = 31/159 (19%)

Query: 50  DSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEI 109
                  D V    G  I     GR         Y      G       +QA        
Sbjct: 11  RESSAPPDDVQLVPGARI---ANGR---------YRLLIFHGGVPPLQFWQALDTALDRQ 58

Query: 110 VAIKKVL----QDKRYKNR---ELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYV 162
           VA+  V                    +  +D P +  +         +      +V E++
Sbjct: 59  VALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV---LDVVHTRAGGL--VVAEWI 113

Query: 163 P-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
              ++  +A            +        +  A    H
Sbjct: 114 RGGSLQEVAD------TSPSPVGAIRAMQSLAAAADAAH 146

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 24/154 (15%), Positives = 39/154 (25%), Gaps = 44/154 (28%)

Query: 90  VGTGSFGVVFQAKCRETGEIVAIKKV-LQDKRYKN-----------RELQIMQML----- 132
           +G G FG VF  +       VAIK + ++     N            E+ I + L     
Sbjct: 28  IGEGVFGEVF--QTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSG 85

Query: 133 ----DHPNIVALKHCFFSTTDKEELYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIY-- 184
                    + L            L L     Y     + N     +      + L +  
Sbjct: 86  EVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEF 145

Query: 185 -----------------VKLYTYQICRALAYIHN 201
                             K   +Q+  +LA    
Sbjct: 146 GGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA 179

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.98
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.98
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.97
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.97
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.96
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.96
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.96
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.96
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.96
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.96
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
3bhy_A	283	Death-associated protein kinase 3; death associate	99.96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.96
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.96
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.95
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.95
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.95
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.95
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.95
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.95
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.95
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.95
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.94
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.94
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.94
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.93
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.93
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.93
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.93
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.93
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.93
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.93
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.93
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.92
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.92
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.92
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.92
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.92
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.92
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.92
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.92
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.92
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.92
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.92
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.92
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.91
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.91
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.91
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.91
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.91
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.91
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.91
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.91
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.91
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.91
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.91
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.91
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.91
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.91
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.91
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.91
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.91
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.91
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.9
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.9
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.9
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.9
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.9
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.9
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.9
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.9
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.9
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.9
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.9
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.9
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.9
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.9
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.9
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.89
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.89
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.89
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.89
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.89
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.89
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.89
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.88
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.88
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.88
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.88
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.87
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.87
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.86
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.86
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.52
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.5
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.44
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.4
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.22
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.47
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.89
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.85
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.37
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	97.04
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.03
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.99
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.97
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	96.59
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	96.45
3ats_A	357	Putative uncharacterized protein; hypothetical pro	96.07
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.76
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	94.21
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	92.53
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	92.18
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	91.69
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	91.61
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	91.18
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	89.31
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	88.54
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	88.36
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	87.64
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	85.46
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	84.31
3mes_A	424	Choline kinase; malaria, structural genomics, stru	80.5
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	80.05

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-40  Score=303.94  Aligned_cols=236  Identities=29%  Similarity=0.485  Sum_probs=175.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~  153 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||+|++.      .+.+.+|+.+|+.|+|||||++++++..... .+..
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            45799999999999999999999999999999999643      2456789999999999999999999854321 2446


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c---------C-hH----
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V---------D-QL----  207 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~---------~-~~----  207 (335)
                      ++|||||||+|+|.+++..    .+.+++.+++.|++||+.||+|||++|            +         | .+    
T Consensus       133 ~~~ivmE~~~g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~  208 (398)
T 4b99_A          133 SVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL  208 (398)
T ss_dssp             CEEEEEECCSEEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred             EEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence            6999999999999998875    678999999999999999999999998            0         0 00    


Q ss_pred             --------HhHhhhcCCCCHHHhhhh--CCCCCC--------------------C-------------------------
Q 019844          208 --------VEIIKVLGTPTREEIKCM--NPNYTE--------------------F-------------------------  232 (335)
Q Consensus       208 --------~~~~~~~g~~~~~~~~~~--~~~~~~--------------------~-------------------------  232 (335)
                              ......+||+.|......  ...|..                    |                         
T Consensus       209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~  288 (398)
T 4b99_A          209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ  288 (398)
T ss_dssp             -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred             ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence                    011234666653222211  111110                    0                         


Q ss_pred             ------------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCC
Q 019844          233 ------------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPL  300 (335)
Q Consensus       233 ------------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~  300 (335)
                                  .++.....+|...+ +.++++++|||.+||++||++|||+.|+|+||||++.+.|...+..    .+.
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~p~~~p~~----~~~  363 (398)
T 4b99_A          289 AVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDC----APP  363 (398)
T ss_dssp             -----CHHHHHHSSCCCCCCCHHHHS-TTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTCCGGGSCCC----SSC
T ss_pred             hhhhhhhhhhhhcCCCcCCCCHHHhC-CCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCCCCccccCC----CCC
Confidence                        01111122233333 5689999999999999999999999999999999999887665332    334


Q ss_pred             CCCCcccCCCCCHHHHhhcChHHHhh
Q 019844          301 FNFKPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +++. .+...++.+.+++.|++++..
T Consensus       364 ~~~~-~~~~~~~~~~~k~~i~~ei~~  388 (398)
T 4b99_A          364 FDFA-FDREALTRERIKEAIVAEIED  388 (398)
T ss_dssp             CCCH-HHHSCCCHHHHHHHHHHHHHH
T ss_pred             CCCc-cchhhcCHHHHHHHHHHHHHH
Confidence            5554 456678889999988887654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.2e-38  Score=289.42  Aligned_cols=246  Identities=44%  Similarity=0.838  Sum_probs=194.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCC-----------
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-----------  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-----------  149 (335)
                      ..+|++++.||+|+||.||+|.+..+|+.||||++..+.....+|+.+|+.++|||||+++++|.....           
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~   85 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDD   85 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-------------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccccc
Confidence            346999999999999999999999999999999998777777899999999999999999999976432           


Q ss_pred             ----------------------CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----
Q 019844          150 ----------------------KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----  203 (335)
Q Consensus       150 ----------------------~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----  203 (335)
                                            ....++++|||||+|+|.+.+.........+++..++.|+.||+.||.|||++|    
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~  165 (383)
T 3eb0_A           86 HNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHR  165 (383)
T ss_dssp             ------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred             cccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccC
Confidence                                  345678999999999999999876666788999999999999999999999988    


Q ss_pred             --------------------------------------------------------------------------------
Q 019844          204 --------------------------------------------------------------------------------  203 (335)
Q Consensus       204 --------------------------------------------------------------------------------  203 (335)
                                                                                                      
T Consensus       166 Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  245 (383)
T 3eb0_A          166 DIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE  245 (383)
T ss_dssp             CCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCC
Confidence                                                                                            


Q ss_pred             --cChHHhHhhhcCCCCHHHhhhhCCCCCCCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCccc
Q 019844          204 --VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF  281 (335)
Q Consensus       204 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f  281 (335)
                        .+.+..++..+|++..+.+..+.+.|....++......|...++..+++++.+||.+||+.||.+|||+.|+|+||||
T Consensus       246 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  325 (383)
T 3eb0_A          246 TSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF  325 (383)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             ChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHH
Confidence              122223334445555555555566666667777777888888888899999999999999999999999999999999


Q ss_pred             ccCCC-------CCCCCCCC--CCCCCCCCCCcccCCCCCHHHHhhcChHHHhh
Q 019844          282 DELRD-------PNTRLPNG--RPLPPLFNFKPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       282 ~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      ++++.       +....|..  .++|.+++|.+.+++.++++.+..+++++...
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  379 (383)
T 3eb0_A          326 DHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGNVLNRILPKNFSP  379 (383)
T ss_dssp             HHHHHC------------------CCCCSCCCHHHHHHSCHHHHHHHSCC----
T ss_pred             HHHHhhccccccccccCCCcccCCCCCCCCCCHHHHhcCCHHHHhhcCchhhcc
Confidence            88654       33344444  67899999999999999999999999987654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.9e-39  Score=284.62  Aligned_cols=198  Identities=25%  Similarity=0.321  Sum_probs=151.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||+|.+.       .+.+.+|+.+|+.|+|||||+++++|     .+..
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~  105 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDDE  105 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence            35699999999999999999999999999999999642       24578999999999999999999999     6667


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      ++|||||||+| +|.+++..    .+.++|.+++.|+.||+.||+|||+++                             
T Consensus       106 ~~yivmEy~~gG~L~~~i~~----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~  181 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV  181 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCcee
Confidence            79999999996 99999986    678999999999999999999999998                             


Q ss_pred             cC---hHHhHhhhcCCCCH---HHhhhhCCCCCC------------------CCCCCCCCC-------ccccccccCCCh
Q 019844          204 VD---QLVEIIKVLGTPTR---EEIKCMNPNYTE------------------FKFPQIKPH-------PWHKVFQKRLPP  252 (335)
Q Consensus       204 ~~---~~~~~~~~~g~~~~---~~~~~~~~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~  252 (335)
                      ..   ......+.+||+.|   |.+...  .|..                  ..|......       .....+|..+|+
T Consensus       182 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~--~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~  259 (311)
T 4aw0_A          182 LSPESKQARANSFVGTAQYVSPELLTEK--SACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP  259 (311)
T ss_dssp             CCTTTTCCCBCCCCSCGGGCCHHHHHHS--CBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCH
T ss_pred             cCCCCCcccccCcccCcccCCHHHHcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCH
Confidence            00   00011234566653   222110  1110                  011100000       001235678999


Q ss_pred             HHHHHHHHhccCCCCCCCCHHH------HhcCcccccCCCCCC
Q 019844          253 EAVDLVCRFFQYSPNLRCTALE------ACVHPFFDELRDPNT  289 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~------~L~hp~f~~~~~~~~  289 (335)
                      ++++||.+||+.||++|||+.|      +++||||+.+.+...
T Consensus       260 ~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l  302 (311)
T 4aw0_A          260 KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL  302 (311)
T ss_dssp             HHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTG
T ss_pred             HHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHh
Confidence            9999999999999999999887      589999999876543

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.4e-38  Score=275.35  Aligned_cols=194  Identities=23%  Similarity=0.292  Sum_probs=140.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.       ...+.+|+.+|+.++|||||+++++|     .+..
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~   86 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSKD   86 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EECC
Confidence            35799999999999999999999999999999999643       24578999999999999999999999     5566


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------c
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------V  204 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------~  204 (335)
                      ++|||||||+|+|.+++..    ++.+++.+++.|+.||+.||+|||++|                             .
T Consensus        87 ~~~ivmEy~~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~  162 (275)
T 3hyh_A           87 EIIMVIEYAGNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM  162 (275)
T ss_dssp             EEEEEEECCCEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---
T ss_pred             EEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeec
Confidence            7999999998899999886    678999999999999999999999998                             0


Q ss_pred             ChHHhHhhhcCCCCHHHhhhhC-CCCCC-------------------CCCCCCCCC-------ccccccccCCChHHHHH
Q 019844          205 DQLVEIIKVLGTPTREEIKCMN-PNYTE-------------------FKFPQIKPH-------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       205 ~~~~~~~~~~g~~~~~~~~~~~-~~~~~-------------------~~~~~~~~~-------~~~~~~~~~~s~~~~~l  257 (335)
                      .........+||+.+...+... ..|..                   ..|......       .-...+|..+|+++++|
T Consensus       163 ~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  242 (275)
T 3hyh_A          163 TDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGL  242 (275)
T ss_dssp             ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHH
T ss_pred             CCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            1111122345666532222111 11110                   011100000       00123456789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCccccc
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      |.+||+.||++|||+.|+|+||||+.
T Consensus       243 i~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          243 IKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             HHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             HHHHccCChhHCcCHHHHHcCccccc
Confidence            99999999999999999999999974

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-38  Score=283.78  Aligned_cols=196  Identities=22%  Similarity=0.280  Sum_probs=147.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..|+++++||+|+||+||+|+++.+|+.||||++...    .+.+.+|+.+|+.++|||||+++++|     .+..++||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i  148 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV  148 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEEE
Confidence            4599999999999999999999999999999999632    35578999999999999999999999     55566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c------------------Ch
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V------------------DQ  206 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~------------------~~  206 (335)
                      |||||+| +|.+++..     +.+++.+++.|+.||+.||+|||++|            +                  ..
T Consensus       149 vmEy~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  223 (346)
T 4fih_A          149 VMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  223 (346)
T ss_dssp             EECCCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             EEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence            9999996 99998874     56999999999999999999999998            0                  00


Q ss_pred             HHhHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCC----------CCccccccccCCChHHHHH
Q 019844          207 LVEIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIK----------PHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       207 ~~~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~----------~~~~~~~~~~~~s~~~~~l  257 (335)
                      .......+||+.|...+... ..|..                  ..|....          ..+.....+..+|+++++|
T Consensus       224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dl  303 (346)
T 4fih_A          224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF  303 (346)
T ss_dssp             SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHH
T ss_pred             CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHH
Confidence            01112345666532221110 11110                  0010000          0001112235689999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      |.+||+.||++|||+.|+|+||||++...|
T Consensus       304 i~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p  333 (346)
T 4fih_A          304 LDRLLVRDPAQRATAAELLKHPFLAKAGPP  333 (346)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence            999999999999999999999999986544

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.9e-38  Score=281.62  Aligned_cols=195  Identities=21%  Similarity=0.295  Sum_probs=143.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      -++|++++.||+|+||+||+|+++.+|+.||||+|.+.      ...+.+|+.+|+.|+|||||+++++|     .+..+
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~~~   97 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EENGS   97 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EECCE
Confidence            35799999999999999999999999999999999643      24578999999999999999999999     55667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------c
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------V  204 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------~  204 (335)
                      +|||||||+| +|.++|....  ...++|.+++.|+.||+.||+|||++|                             .
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  175 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL  175 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred             EEEEEeCCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceee
Confidence            9999999996 9999997632  456899999999999999999999998                             1


Q ss_pred             Ch-HHhHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCC---------CCCccccccccCCChHHH
Q 019844          205 DQ-LVEIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQI---------KPHPWHKVFQKRLPPEAV  255 (335)
Q Consensus       205 ~~-~~~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~---------~~~~~~~~~~~~~s~~~~  255 (335)
                      .. .......+||+.|...+... ..|..                  ..|...         ....+ ..++..+|++++
T Consensus       176 ~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-~~~~~~~s~~~~  254 (350)
T 4b9d_A          176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-PPVSLHYSYDLR  254 (350)
T ss_dssp             CHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCCTTSCHHHH
T ss_pred             cCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccCCHHHH
Confidence            11 11223456777633222110 11210                  011100         00001 123467899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      +||.+||+.||++|||+.|+|+||||++
T Consensus       255 ~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          255 SLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            9999999999999999999999999975

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=8e-38  Score=285.03  Aligned_cols=196  Identities=22%  Similarity=0.280  Sum_probs=147.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..|+++++||+|+||+||+|+++.+|+.||||+|...    .+.+.+|+.+|+.|+|||||+++++|     ....++||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~-----~~~~~~~i  225 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY-----LVGDELWV  225 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EECCEEEE
Confidence            4699999999999999999999999999999999632    35578999999999999999999999     45566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c------------------Ch
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V------------------DQ  206 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~------------------~~  206 (335)
                      |||||+| +|.+++..     +.+++.+++.|+.||+.||+|||++|            +                  ..
T Consensus       226 VmEy~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~  300 (423)
T 4fie_A          226 VMEFLEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  300 (423)
T ss_dssp             EEECCTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred             EEeCCCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence            9999996 99999864     56999999999999999999999998            0                  00


Q ss_pred             HHhHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCC----------CCccccccccCCChHHHHH
Q 019844          207 LVEIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIK----------PHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       207 ~~~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~----------~~~~~~~~~~~~s~~~~~l  257 (335)
                      .......+||+.|...+... ..|..                  ..|....          ..+.....+..+|+++++|
T Consensus       301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dl  380 (423)
T 4fie_A          301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF  380 (423)
T ss_dssp             CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHH
T ss_pred             CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHH
Confidence            01112335665532211110 11110                  0010000          0000112235789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      |.+||+.||++|||+.|+|+||||++...|
T Consensus       381 i~~~L~~dP~~R~ta~ell~Hp~~~~~~~p  410 (423)
T 4fie_A          381 LDRLLVRDPAQRATAAELLKHPFLAKAGPP  410 (423)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred             HHHHcCCChhHCcCHHHHhcCHHhcCCCCC
Confidence            999999999999999999999999986543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.3e-36  Score=278.06  Aligned_cols=244  Identities=66%  Similarity=1.081  Sum_probs=199.4

Q ss_pred             ccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccEEE
Q 019844           78 SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELYLN  156 (335)
Q Consensus        78 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~~  156 (335)
                      .....+|.+++.||+|+||.||+|+++.+|+.||||++........+|+.+|+.++|||||+++++|+.... .+..+++
T Consensus        50 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             CCEEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             CcccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            345668999999999999999999999999999999998777777799999999999999999999875432 4566788


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------------------  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------------  203 (335)
                      +||||++++|.+++.........+++..++.|+.||+.||.|||+++                                 
T Consensus       130 lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~  209 (420)
T 1j1b_A          130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  209 (420)
T ss_dssp             EEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             eehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence            99999999888888876656778999999999999999999999988                                 


Q ss_pred             -----------------------------------------------------cChHHhHhhhcCCCCHHHhhhhCCCCC
Q 019844          204 -----------------------------------------------------VDQLVEIIKVLGTPTREEIKCMNPNYT  230 (335)
Q Consensus       204 -----------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~  230 (335)
                                                                           .+++..++..+|++..+.+..+.+.|.
T Consensus       210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~  289 (420)
T 1j1b_A          210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT  289 (420)
T ss_dssp             TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCC
T ss_pred             CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence                                                                 112233334445555555555666666


Q ss_pred             CCCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcccCCC
Q 019844          231 EFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSG  310 (335)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (335)
                      .+.++.+...+|...++..+++++.+||.+||++||.+|||+.|+|+||||+.++++....+.....+.+++|...++..
T Consensus       290 ~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (420)
T 1j1b_A          290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSS  369 (420)
T ss_dssp             CCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTCCCTTSCCCCCCCCCCHHHHTT
T ss_pred             hhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccccccccCCCCCCCCccCCCCHHHhcc
Confidence            77777777788888888889999999999999999999999999999999999999888878778888899998655543


Q ss_pred             CCHHHHhhcChH
Q 019844          311 IPPETINRLIPE  322 (335)
Q Consensus       311 ~~~~~~~~~~~~  322 (335)
                       .++....+++.
T Consensus       370 -~~~~~~~~~~~  380 (420)
T 1j1b_A          370 -NPPLATILIPP  380 (420)
T ss_dssp             -CGGGHHHHSCT
T ss_pred             -ChhHHHhhCCH
Confidence             33333334433

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2.4e-36  Score=276.84  Aligned_cols=249  Identities=61%  Similarity=1.051  Sum_probs=201.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccEEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELYLNL  157 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~~i  157 (335)
                      ....+|++.+.||+|+||.||+|++..+++ +|+|++........+|+.+|+.++||||++++++|..... .+..++|+
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            456789999999999999999999977665 8999887766677799999999999999999999976544 55667899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------------  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------------  203 (335)
                      |||||++++...+.........+++..++.|+.||+.||.|||+++                                  
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence            9999999877777765555778999999999999999999999988                                  


Q ss_pred             ----------------------------------------------------cChHHhHhhhcCCCCHHHhhhhCCCCCC
Q 019844          204 ----------------------------------------------------VDQLVEIIKVLGTPTREEIKCMNPNYTE  231 (335)
Q Consensus       204 ----------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~  231 (335)
                                                                          .+.+..+...+|++..+.+..+.+.|..
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~  275 (394)
T 4e7w_A          196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYME  275 (394)
T ss_dssp             CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSS
T ss_pred             CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhh
Confidence                                                                1112222333444444444445555555


Q ss_pred             CCCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcccCCCC
Q 019844          232 FKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGI  311 (335)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (335)
                      ..++.....+|...++..+++++.+||.+||++||.+|||+.++|+||||++++++....+....++++++|...++.. 
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  354 (394)
T 4e7w_A          276 HKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSV-  354 (394)
T ss_dssp             SCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTSSCCCCTTSSCCCCSCCCCHHHHHT-
T ss_pred             hccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhccccccCCCCCCCCCcCCCCHHHhhc-
Confidence            6666677777777887889999999999999999999999999999999999999888888888899999999655444 


Q ss_pred             CHHHHhhcChHHHhhccc
Q 019844          312 PPETINRLIPEHARKQNL  329 (335)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~  329 (335)
                      .++.+.++++.+...+.+
T Consensus       355 ~~~~~~~~~~~~~~~~~~  372 (394)
T 4e7w_A          355 RPDLISRLVPQHAEAELL  372 (394)
T ss_dssp             CGGGHHHHSCGGGCSSSS
T ss_pred             CHHHHHhhccHhhhhhhh
Confidence            557888888877655443

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.3e-37  Score=269.03  Aligned_cols=195  Identities=23%  Similarity=0.333  Sum_probs=144.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++.++||+|+||+||+|.++.+++.||+|++.+.      ...+.+|+.+|+.|+|||||+++++|.... ....++||
T Consensus        28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~l  106 (290)
T 3fpq_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEE
Confidence            47788999999999999999999999999999642      245789999999999999999999985432 24567899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------cCh---HHh----------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------VDQ---LVE----------  209 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------~~~---~~~----------  209 (335)
                      |||||+| +|.+++..    .+.+++..++.|+.||+.||+|||+++              ++.   ..+          
T Consensus       107 vmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            9999995 99999986    577999999999999999999999886              100   000          


Q ss_pred             ----HhhhcCCCCHHHhhhhCCCCCC------------------CCCCCC----------CCCccccccccCCChHHHHH
Q 019844          210 ----IIKVLGTPTREEIKCMNPNYTE------------------FKFPQI----------KPHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       210 ----~~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~----------~~~~~~~~~~~~~s~~~~~l  257 (335)
                          ....+|||.+.........|..                  ..|...          ........++..+++++++|
T Consensus       183 ~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  262 (290)
T 3fpq_A          183 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI  262 (290)
T ss_dssp             CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred             CCCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHH
Confidence                1123455553222211111221                  011100          11111223456788999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCccccc
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      |.+||+.||++|||+.|+|+||||++
T Consensus       263 i~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          263 IEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHccCChhHCcCHHHHhcCccccC
Confidence            99999999999999999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5e-37  Score=272.42  Aligned_cols=197  Identities=22%  Similarity=0.288  Sum_probs=148.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEeec
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      ..|.+.++||+|+||+||+|+++.+|+.||||+++.+. ...+|+.+|+.|+|||||+++++|     .+..++||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-~~~~E~~il~~l~HpnIV~l~~~~-----~~~~~~~ivmEy  131 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSPRIVPLYGAV-----REGPWVNIFMEL  131 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCTHHHHTTTTCCCTTBCCEEEEE-----EETTEEEEEECC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-hHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEEEEEec
Confidence            46999999999999999999999999999999997643 345899999999999999999999     556679999999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH---HhH---------------
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL---VEI---------------  210 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~---~~~---------------  210 (335)
                      |+| +|.+++..    .+.+++.+++.|+.||+.||+|||+++            ++..   .++               
T Consensus       132 ~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~  207 (336)
T 4g3f_A          132 LEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG  207 (336)
T ss_dssp             CTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred             cCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence            996 99999986    577999999999999999999999998            1000   000               


Q ss_pred             ------hhhcCCCCHHHhhhh-CCCCCC------------------CCCCCCCC----------CccccccccCCChHHH
Q 019844          211 ------IKVLGTPTREEIKCM-NPNYTE------------------FKFPQIKP----------HPWHKVFQKRLPPEAV  255 (335)
Q Consensus       211 ------~~~~g~~~~~~~~~~-~~~~~~------------------~~~~~~~~----------~~~~~~~~~~~s~~~~  255 (335)
                            ...+||+.|...+.. ...|..                  ..|.....          .+....+++.+|+++.
T Consensus       208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~  287 (336)
T 4g3f_A          208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA  287 (336)
T ss_dssp             ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred             cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHH
Confidence                  112466553221111 011110                  01111000          0111234578999999


Q ss_pred             HHHHHhccCCCCCCCCHHHH-------------hcCcccccCCCCC
Q 019844          256 DLVCRFFQYSPNLRCTALEA-------------CVHPFFDELRDPN  288 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~-------------L~hp~f~~~~~~~  288 (335)
                      +||.+||+.||++|||+.|+             |+|||+.++..|.
T Consensus       288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~Pr  333 (336)
T 4g3f_A          288 QAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEPR  333 (336)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCCC
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCCC
Confidence            99999999999999999997             6799999887653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=9.4e-38  Score=273.80  Aligned_cols=196  Identities=23%  Similarity=0.287  Sum_probs=142.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ++|++++.||+|+||+||+|++.   .+++.||||++.+.      ...+.+|+.+|+.++|||||+++++|     .+.
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----QTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----EET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence            46999999999999999999984   46889999999642      24577899999999999999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC----------------------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~----------------------------  203 (335)
                      .++|||||||+| +|.+++..    .+.+++.+++.|+.||+.||+|||++|                            
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~  174 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK  174 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccce
Confidence            679999999996 99999986    678999999999999999999999998                            


Q ss_pred             --cChHHhHhhhcCCCCHHHhhhh-CCCCCC------------------CCCCCCCCC-------ccccccccCCChHHH
Q 019844          204 --VDQLVEIIKVLGTPTREEIKCM-NPNYTE------------------FKFPQIKPH-------PWHKVFQKRLPPEAV  255 (335)
Q Consensus       204 --~~~~~~~~~~~g~~~~~~~~~~-~~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~~~~  255 (335)
                        .+........+||+.+...+.. ...|..                  ..|......       .-...+|..+|++++
T Consensus       175 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~  254 (304)
T 3ubd_A          175 ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQ  254 (304)
T ss_dssp             C-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             eccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHH
Confidence              0001111234566653222111 111211                  011100000       001234577999999


Q ss_pred             HHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          256 DLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +||.+||+.||++|||     ++|+|+||||+.+++
T Consensus       255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             HHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCH
Confidence            9999999999999998     589999999998764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.6e-36  Score=265.33  Aligned_cols=206  Identities=19%  Similarity=0.291  Sum_probs=138.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCC-------
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-------  149 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-------  149 (335)
                      .+|++++.||+|+||+||+|+++.+|+.||||+|...     .+.+.+|+.+|+.|+|||||+++++|...+.       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4699999999999999999999999999999999642     2457799999999999999999999965432       


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c--ChH-------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V--DQL-------  207 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~--~~~-------  207 (335)
                      ....++|||||||+| +|.+++..... .....+..++.|+.||+.||+|||++|            +  +..       
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCc
Confidence            234568999999996 99999975221 122455678999999999999999998            0  000       


Q ss_pred             ---------------------HhHhhhcCCCCHHHhhhhC-CCCCC---------------CCCCCC----------CCC
Q 019844          208 ---------------------VEIIKVLGTPTREEIKCMN-PNYTE---------------FKFPQI----------KPH  240 (335)
Q Consensus       208 ---------------------~~~~~~~g~~~~~~~~~~~-~~~~~---------------~~~~~~----------~~~  240 (335)
                                           ......+||+.|...+... ..|..               +.+...          ...
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~  243 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNL  243 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTT
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHhcC
Confidence                                 0111234665532221110 11111               000000          000


Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          241 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      .+.. .+...++.+.+||.+||+.||.+|||+.|+|+||||+++.+|..
T Consensus       244 ~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~p~~  291 (299)
T 4g31_A          244 KFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGK  291 (299)
T ss_dssp             CCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-----
T ss_pred             CCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCCCCc
Confidence            0111 11345677899999999999999999999999999999876654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.3e-33  Score=268.81  Aligned_cols=197  Identities=21%  Similarity=0.296  Sum_probs=148.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHH---HHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNR---ELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~---Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|+++++||+|+||+||+|+++.+|+.||||+|.+..       ..+.+   ++.+++.++|||||+++++|     .
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f-----~  262 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----H  262 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----E
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE-----E
Confidence            457999999999999999999999999999999996431       22333   45677778999999999999     6


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC------------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD------------  205 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~------------  205 (335)
                      +..++|||||||+| +|.++|..    .+.++|..++.|+.||+.||+|||++|            ++            
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGl  338 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL  338 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             ECCEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccce
Confidence            66779999999996 99999986    678999999999999999999999999            00            


Q ss_pred             ----hHHhHhhhcCCCCHHHhhhh--CCCCCC------------------CCCCCCCCC----------ccccccccCCC
Q 019844          206 ----QLVEIIKVLGTPTREEIKCM--NPNYTE------------------FKFPQIKPH----------PWHKVFQKRLP  251 (335)
Q Consensus       206 ----~~~~~~~~~g~~~~~~~~~~--~~~~~~------------------~~~~~~~~~----------~~~~~~~~~~s  251 (335)
                          ......+.+|||.|......  ...|..                  ..|......          .....+|..+|
T Consensus       339 A~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S  418 (689)
T 3v5w_A          339 ACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS  418 (689)
T ss_dssp             CEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred             eeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCC
Confidence                00111234677764333322  112221                  011110000          01123567899


Q ss_pred             hHHHHHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +++++||.+||+.||.+|++     ++||++||||+.++|
T Consensus       419 ~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          419 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCH
Confidence            99999999999999999998     799999999999865

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=6.9e-33  Score=258.81  Aligned_cols=121  Identities=25%  Similarity=0.359  Sum_probs=97.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|++++.||+|+||+||+|+++.+++.||||++.+.      .+.+.+|+.+|+.++|||||++++++........
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  129 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF  129 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence            3446799999999999999999999999999999999642      2457799999999999999999999976544455


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|+||||++|+|.+++..    ...+++..++.|+.||+.||+|||+++
T Consensus       130 ~~~~lv~e~~~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~  176 (458)
T 3rp9_A          130 DELYVVLEIADSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSAG  176 (458)
T ss_dssp             CCEEEEECCCSEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEEeccccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            67999999999999998875    567999999999999999999999998

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=7.8e-34  Score=270.76  Aligned_cols=201  Identities=22%  Similarity=0.321  Sum_probs=150.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||+|.+.    ...+.+|+.+|+.|+|||||+++++|     .+..++|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~~~  230 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV  230 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEE
Confidence            46799999999999999999999999999999999643    34577999999999999999999999     6667799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC------------------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD------------------  205 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~------------------  205 (335)
                      ||||||+| +|.+++..   ..+.+++.+++.|+.||+.||+|||+++            ++                  
T Consensus       231 iv~E~~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          231 MIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEECCCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             EEEeecCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            99999996 99988853   1467999999999999999999999998            00                  


Q ss_pred             -hHHhHhhhcCCCCH---HHhhh---------------------hCCCCCCCCC----CCCCC--CccccccccCCChHH
Q 019844          206 -QLVEIIKVLGTPTR---EEIKC---------------------MNPNYTEFKF----PQIKP--HPWHKVFQKRLPPEA  254 (335)
Q Consensus       206 -~~~~~~~~~g~~~~---~~~~~---------------------~~~~~~~~~~----~~~~~--~~~~~~~~~~~s~~~  254 (335)
                       ........+||+.+   |.+..                     +.+.|.....    ..+..  ..+....+..+|+++
T Consensus       308 ~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  387 (573)
T 3uto_A          308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  387 (573)
T ss_dssp             CTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred             cCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence             00001122455442   21111                     1111111000    00001  111223346789999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      ++||.+||+.||.+|||+.|+|+||||+...+|..
T Consensus       388 ~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~~  422 (573)
T 3uto_A          388 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGR  422 (573)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTTT
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcCcCCCCCCCc
Confidence            99999999999999999999999999998776643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.7e-33  Score=252.52  Aligned_cols=112  Identities=21%  Similarity=0.383  Sum_probs=98.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEecccc--hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQDK--RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~~--~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|+++++||+|+||+||+|+++   .+++.||||++.+..  ..+.+|+.+|+.+ +|||||+++++|     .+..
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~-----~~~~   93 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCF-----RKND   93 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEE-----EETT
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEE-----EECC
Confidence            4567999999999999999999985   467899999986533  4577999999998 699999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||||||+| +|.+++.       .+++.+++.|++||+.||+|||++|
T Consensus        94 ~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~g  137 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQFG  137 (361)
T ss_dssp             EEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            79999999995 9988873       3999999999999999999999999

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.8e-32  Score=254.05  Aligned_cols=239  Identities=20%  Similarity=0.314  Sum_probs=171.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|.+++.||+|+||.||+|.++.+++.||||++.+.      .+.+.+|+.+|+.++||||+++++++........
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~  102 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF  102 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence            3456799999999999999999999999999999999642      2457799999999999999999999965433333


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      ..+|+||||++|+|.+++..    ...+++..++.|+.||+.||+|||++|                             
T Consensus       103 ~~~~lv~e~~~~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          103 DELYIVLEIADSDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             CCEEEEEECCSEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             CeEEEEEecCCcCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence            56899999999999999875    567999999999999999999999998                             


Q ss_pred             cChH-----------------------HhHhhhcCCCCHHHhhhh--CCCCCC--------------------C------
Q 019844          204 VDQL-----------------------VEIIKVLGTPTREEIKCM--NPNYTE--------------------F------  232 (335)
Q Consensus       204 ~~~~-----------------------~~~~~~~g~~~~~~~~~~--~~~~~~--------------------~------  232 (335)
                      ....                       ......+||+.+......  ...|..                    +      
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~  258 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN  258 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence            0000                       011223444432111100  000100                    0      


Q ss_pred             CCCCC-----------------------------------------------------------CCCccccccccCCChH
Q 019844          233 KFPQI-----------------------------------------------------------KPHPWHKVFQKRLPPE  253 (335)
Q Consensus       233 ~~~~~-----------------------------------------------------------~~~~~~~~~~~~~s~~  253 (335)
                      ..+..                                                           ....+...+ +.++++
T Consensus       259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~  337 (432)
T 3n9x_A          259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKY-PSISDD  337 (432)
T ss_dssp             CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHS-TTSCHH
T ss_pred             ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHC-CCCCHH
Confidence            00000                                                           000111112 468999


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcccCCCCCHHHHhhcChHHHhh
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +.+||.+||++||++|||+.|+|+||||+.++++..+.....+  ....|+  +...++.+.+++.+++|+..
T Consensus       338 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~e~~~  406 (432)
T 3n9x_A          338 GINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKK--IILPFD--DWMVLSETQLRYIFLKEVQS  406 (432)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC---CCC--CCCSSC--TTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccCcCCCCC--CCCChh--hcccCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999887665433222  223444  34678999999999998865

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.7e-31  Score=242.16  Aligned_cols=235  Identities=23%  Similarity=0.403  Sum_probs=166.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..+|++++.||+|+||.||+|.+..+++.||||++....     ..+.+|+.+++.++||||+++++++..........+
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  105 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV  105 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence            346999999999999999999999999999999996422     456799999999999999999999965443444568


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHh------------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVE------------  209 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~------------  209 (335)
                      |+||||++|+|.+++..     +.+++..++.|+.||+.||.|||++|            ++.  ...            
T Consensus       106 ~iv~e~~~~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          106 YIVQDLMETDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             EEEEECCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEcccCcCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            99999999999998874     56999999999999999999999998            000  000            


Q ss_pred             -------HhhhcCCCC---HHHhhh----------------------hCCCCCCCC------------------------
Q 019844          210 -------IIKVLGTPT---REEIKC----------------------MNPNYTEFK------------------------  233 (335)
Q Consensus       210 -------~~~~~g~~~---~~~~~~----------------------~~~~~~~~~------------------------  233 (335)
                             ....+|++.   ++.+..                      +.+.|....                        
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  260 (364)
T 3qyz_A          181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII  260 (364)
T ss_dssp             GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred             CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence                   001123322   221110                      111111000                        


Q ss_pred             ----------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCC
Q 019844          234 ----------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNF  303 (335)
Q Consensus       234 ----------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~  303 (335)
                                .+.....+|...+ ..+++++.+||.+||+.||.+|||+.++|+||||++...+......    ...+.+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~----~~~~~~  335 (364)
T 3qyz_A          261 NLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIA----EAPFKF  335 (364)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHC-TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCCGGGSCCC----SSCCCC
T ss_pred             hhhHHHHHHhcCCccCCCHHHhC-CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccCcccccCC----CCcCCc
Confidence                      0000111122222 5688999999999999999999999999999999998766554322    223445


Q ss_pred             CcccCCCCCHHHHhhcChHHHhh
Q 019844          304 KPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      + .++..++.+.+++++.+++.+
T Consensus       336 ~-~~~~~~~~~~~~~~~~~e~~~  357 (364)
T 3qyz_A          336 D-MELDDLPKEKLKELIFEETAR  357 (364)
T ss_dssp             C------CCHHHHHHHHHHHTGG
T ss_pred             c-cccccCCHHHHHHHHHHHHHH
Confidence            4 567889999999999988765

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=3.9e-32  Score=253.61  Aligned_cols=238  Identities=20%  Similarity=0.270  Sum_probs=158.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~  151 (335)
                      ...++|++++.||+|+||+||+|.++.+++.||||++.+.      .+.+.+|+.+|+.++|||||+++++|..... ..
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  138 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE  138 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence            3456799999999999999999999999999999999643      2456799999999999999999999954332 23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--HH---------
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--LV---------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--~~---------  208 (335)
                      ...+|||||||+|+|.+.+.      ..+++..++.++.||+.||+|||++|+            +.  ..         
T Consensus       139 ~~~~~lv~E~~~~~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          139 FQDVYLVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             CCEEEEEEECCSEEHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             CCeEEEEEeCCCCCHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence            45689999999998777663      359999999999999999999999980            00  00         


Q ss_pred             ------hHhhhcCCCC---HHHhhh---------------------hCCCCCCC--------------------------
Q 019844          209 ------EIIKVLGTPT---REEIKC---------------------MNPNYTEF--------------------------  232 (335)
Q Consensus       209 ------~~~~~~g~~~---~~~~~~---------------------~~~~~~~~--------------------------  232 (335)
                            .....+|++.   ++.+..                     +.+.|...                          
T Consensus       213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~  292 (464)
T 3ttj_A          213 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  292 (464)
T ss_dssp             ----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred             ecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence                  0011233332   221111                     01111000                          


Q ss_pred             -------CCCCCCCCccccccccC-----------CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCC
Q 019844          233 -------KFPQIKPHPWHKVFQKR-----------LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG  294 (335)
Q Consensus       233 -------~~~~~~~~~~~~~~~~~-----------~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~  294 (335)
                             ..+......+...++..           .++++.+||.+||++||++|||+.|+|+||||+.+..+....+  
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~~~~~--  370 (464)
T 3ttj_A          293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA--  370 (464)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHHHHSC--
T ss_pred             hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccCcccccC--
Confidence                   00000111111222111           1567999999999999999999999999999998876543211  


Q ss_pred             CCCCCCCCCCcccCCCCCHHHHhhcChHHHhh
Q 019844          295 RPLPPLFNFKPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                       +.+..+++. .+......+.|++.+++++..
T Consensus       371 -~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~  400 (464)
T 3ttj_A          371 -PPPQIYDKQ-LDEREHTIEEWKELIYKEVMN  400 (464)
T ss_dssp             -CC------------CCCHHHHHHHHHHHHHC
T ss_pred             -CCCccCCcc-hhhccCCHHHHHHHHHHHHHH
Confidence             112223333 344567788899988887754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.98  E-value=1e-32  Score=242.19  Aligned_cols=199  Identities=19%  Similarity=0.276  Sum_probs=138.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ..++|.+.+.||+|+||+||+|+++     .++..||||+++..    .+.+.+|+.+|++|+|||||++++++     .
T Consensus        11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~   85 (299)
T 4asz_A           11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC-----V   85 (299)
T ss_dssp             CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C
T ss_pred             CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE-----e
Confidence            3457999999999999999999875     36788999999643    24578999999999999999999999     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhh---------hcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSR---------IHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--  206 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~---------~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--  206 (335)
                      +...+|||||||+| +|.++|.....         ....+++.++..|+.||+.||.|||+++            ++.  
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~  165 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL  165 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence            44558999999995 99999986321         1346999999999999999999999998            000  


Q ss_pred             --------HHhH----------hhhcCCCC---HHHhhh----------------------hCCCCCCCCCCCCCC---C
Q 019844          207 --------LVEI----------IKVLGTPT---REEIKC----------------------MNPNYTEFKFPQIKP---H  240 (335)
Q Consensus       207 --------~~~~----------~~~~g~~~---~~~~~~----------------------~~~~~~~~~~~~~~~---~  240 (335)
                              +...          ....||+.   +|.+..                      +.+.|.......+..   .
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~  245 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ  245 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence                    0000          01123332   222111                      111111100000000   0


Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          241 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ......|..+|+++.+||.+||+.||++|||+.++  |+|++.+.
T Consensus       246 ~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~~~  288 (299)
T 4asz_A          246 GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLA  288 (299)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHHHH
T ss_pred             CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHHHH
Confidence            00123456799999999999999999999999999  56877653

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.3e-31  Score=243.00  Aligned_cols=235  Identities=21%  Similarity=0.344  Sum_probs=154.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ...+|++++.||+|+||.||+|.++.+|+.||||++...      .+.+.+|+.+|+.++||||+++++++..... ...
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            345699999999999999999999999999999998532      2456799999999999999999999954321 122


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHhH--------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVEI--------  210 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~~--------  210 (335)
                      ..+|+||||++++|.+++..     ..+++..++.++.||+.||.|||++|            ++.  ..++        
T Consensus       103 ~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  177 (367)
T 1cm8_A          103 TDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  177 (367)
T ss_dssp             CCCEEEEECCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ceEEEEEecCCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence            44689999997799999874     56999999999999999999999998            000  0000        


Q ss_pred             -----hhhcCCCC---HHHhhh----------------------hCCCCCCC----------------------------
Q 019844          211 -----IKVLGTPT---REEIKC----------------------MNPNYTEF----------------------------  232 (335)
Q Consensus       211 -----~~~~g~~~---~~~~~~----------------------~~~~~~~~----------------------------  232 (335)
                           ....|++.   ++.+..                      +.+.|...                            
T Consensus       178 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~  257 (367)
T 1cm8_A          178 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE  257 (367)
T ss_dssp             CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             cccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence                 00112211   111110                      11111100                            


Q ss_pred             ------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          233 ------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       233 ------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                            .++......+...+ ..+++++.+||.+||+.||.+|||+.++|+||||+.+..+..+...     ..+++. .
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~-----~~~~~~-~  330 (367)
T 1cm8_A          258 AKNYMKGLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV-----QKYDDS-F  330 (367)
T ss_dssp             HHHHHHHSCCCCCCCGGGTC-TTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CC-----CCCCCC--
T ss_pred             HHHHHHhCCCCCCCCHHHHC-CCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCccCCCC-----CCCCCC-h
Confidence                  01111122233333 5679999999999999999999999999999999999877654322     123333 3


Q ss_pred             cCCCCCHHHHhhcChHHHhh
Q 019844          307 ELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +......+.|++.+++++..
T Consensus       331 ~~~~~~~~~~~~~~~~~~~~  350 (367)
T 1cm8_A          331 DDVDRTLDEWKRVTYKEVLS  350 (367)
T ss_dssp             ----CCHHHHHHHHHHHHHT
T ss_pred             hhhcCCHHHHHHHHHHHHHH
Confidence            34467889999999988764

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.98  E-value=2.6e-31  Score=233.61  Aligned_cols=114  Identities=31%  Similarity=0.495  Sum_probs=101.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++++.||+|+||.||+|.++.+++.||||++....      ..+.+|+.+++.++||||+++++++     .....+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE-----EeCCEE
Confidence            46999999999999999999999999999999996432      4567899999999999999999999     555669


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+|+|.+.+...   .+.+++..++.++.||+.||.|||++|
T Consensus        77 ~lv~e~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~  121 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRN  121 (292)
T ss_dssp             EEEEECCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999877776542   467999999999999999999999998

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=1e-31  Score=243.68  Aligned_cols=236  Identities=24%  Similarity=0.327  Sum_probs=160.1

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~  151 (335)
                      ....+|++++.||+|+||.||+|.+..+|+.||||++...      .+.+.+|+.+|+.++||||+++++++..... ..
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            3446799999999999999999999999999999998642      2456799999999999999999999854321 12


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--------hH----
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--------QL----  207 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--------~~----  207 (335)
                      ...+|+||||++++|.+++..     +.+++..++.++.||+.||.|||++|+            +        .+    
T Consensus       106 ~~~~~lv~e~~~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~  180 (367)
T 2fst_X          106 FNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  180 (367)
T ss_dssp             CCCCEEEEECCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred             CCeEEEEecccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence            345789999998899988864     569999999999999999999999980            0        00    


Q ss_pred             ---HhHhhhcCCCC---HHHhhh----------------------hCCCCCCC---------------------------
Q 019844          208 ---VEIIKVLGTPT---REEIKC----------------------MNPNYTEF---------------------------  232 (335)
Q Consensus       208 ---~~~~~~~g~~~---~~~~~~----------------------~~~~~~~~---------------------------  232 (335)
                         .......|++.   ++.+..                      +.+.|...                           
T Consensus       181 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          181 HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             cccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence               00111233332   221111                      01111100                           


Q ss_pred             -------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCc
Q 019844          233 -------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKP  305 (335)
Q Consensus       233 -------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~  305 (335)
                             .++......+...+ ...++++.+||.+||+.||++|||+.++|+||||+.+..|..+...     +.+++. 
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~-----~~~~~~-  333 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA-----DPYDQS-  333 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHT-TTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGGCCCC-----CCCCGG-
T ss_pred             HHHHHHhccCCCCCCCHHHHC-CCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCCCCCC-----CCCCcc-
Confidence                   00011111222222 4678999999999999999999999999999999998887654322     224443 


Q ss_pred             ccCCCCCHHHHhhcChHHHhh
Q 019844          306 PELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       306 ~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      .+...+..+.|++++++++..
T Consensus       334 ~~~~~~~~~~~~~~~~~e~~~  354 (367)
T 2fst_X          334 LESRDLLIDEWKSLTYDEVIS  354 (367)
T ss_dssp             GSSCCCCHHHHHHHHHHHHHH
T ss_pred             hhhccCCHHHHHHHHHHHHHH
Confidence            445678899999999998765

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=4.5e-31  Score=234.26  Aligned_cols=116  Identities=31%  Similarity=0.515  Sum_probs=100.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|++++.||+|+||.||+|++. +++.||+|++....      ..+.+|+.+++.++||||+++++++     ...
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~   91 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSE   91 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCS
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccC
Confidence            45568999999999999999999995 69999999986422      4567999999999999999999999     555


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++|+|||||+|+|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        92 ~~~~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~  139 (311)
T 3niz_A           92 RCLTLVFEFMEKDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQHR  139 (311)
T ss_dssp             SCEEEEEECCSEEHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            669999999999988887652   356999999999999999999999998

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=3e-31  Score=236.98  Aligned_cols=198  Identities=25%  Similarity=0.293  Sum_probs=146.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++.+.      ...+.+|+.+|+.++||||+++++++     ...
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~   86 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETE   86 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EEC
Confidence            4455799999999999999999999999999999999643      23467999999999999999999999     555


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-H-----------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-L-----------  207 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~-----------  207 (335)
                      ..+|+|||||+| +|.+++..    .+.+++..++.++.||+.||+|||++++            +. .           
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           87 KTLYLIMEYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN  162 (328)
T ss_dssp             SEEEEEECCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred             CEEEEEEECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence            669999999985 99999876    5679999999999999999999999980            00 0           


Q ss_pred             -----HhHhhhcCCCC---HHHhhhhCCCCCC-------------------CCCCCCCCCc-------cccccccCCChH
Q 019844          208 -----VEIIKVLGTPT---REEIKCMNPNYTE-------------------FKFPQIKPHP-------WHKVFQKRLPPE  253 (335)
Q Consensus       208 -----~~~~~~~g~~~---~~~~~~~~~~~~~-------------------~~~~~~~~~~-------~~~~~~~~~s~~  253 (335)
                           ......+|++.   ++.+...  .|..                   ..+.......       ....+|..++++
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~  240 (328)
T 3fe3_A          163 EFTVGGKLDAFCGAPPYAAPELFQGK--KYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTD  240 (328)
T ss_dssp             GGSSSCGGGTTSSSGGGCCHHHHHTC--CCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             ecCCCCccccccCCcceeCcccccCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHH
Confidence                 00111223322   1111100  0000                   0010000000       001234568999


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      +.+||++||+.||.+|||+.++|+||||+....+
T Consensus       241 ~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~~  274 (328)
T 3fe3_A          241 CENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEE  274 (328)
T ss_dssp             HHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCTT
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCcc
Confidence            9999999999999999999999999999876543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.7e-31  Score=241.97  Aligned_cols=116  Identities=26%  Similarity=0.471  Sum_probs=94.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+|++++.||+|+||.||+|.++.+|+.||||++.+.      .....+|+.+++.+. ||||+++++++..   .+.
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~~   83 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DND   83 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TTS
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CCC
Confidence            445799999999999999999999999999999998532      245678999999997 9999999999854   233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .++|+|||||+|+|.+++..     +.+++..++.++.||+.||+|||++|
T Consensus        84 ~~~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~  129 (388)
T 3oz6_A           84 RDVYLVFDYMETDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSGG  129 (388)
T ss_dssp             SCEEEEEECCSEEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEecccCcCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45899999999999998874     46999999999999999999999998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=1.5e-31  Score=237.85  Aligned_cols=117  Identities=25%  Similarity=0.391  Sum_probs=99.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+|.+.++||+|+||+||+|+++     .+++.||||+++..    .+.+.+|+.+|++|+|||||++++++     .+.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~-----~~~  115 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC-----TEG  115 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EEC
Confidence            45999999999999999999875     36889999999643    24578999999999999999999999     445


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhh-----------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSR-----------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|||||||+| +|.+++.....           ...++++.++..|+.||+.||.|||+++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  178 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH  178 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            558999999995 99999975321           1346999999999999999999999988

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=2.5e-31  Score=237.24  Aligned_cols=114  Identities=29%  Similarity=0.503  Sum_probs=100.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ++|++++.||+|+||.||+|.++.+++.||||++....     ..+.+|+.+++.++||||+++++++     .....+|
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE-----ECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE-----eeCCEEE
Confidence            46999999999999999999999999999999996432     2456899999999999999999999     4455589


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++|+|.+++...   ...+++..++.++.||+.||.|||++|
T Consensus        77 lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~  120 (324)
T 3mtl_A           77 LVFEYLDKDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQK  120 (324)
T ss_dssp             EEEECCSEEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecccccCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999999888763   356999999999999999999999998

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=8.9e-31  Score=234.14  Aligned_cols=115  Identities=24%  Similarity=0.431  Sum_probs=102.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++++.||+|+||.||+|++..+++.||||++....      ..+.+|+.+++.++||||+++++++     ....
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~  106 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI-----HHNH  106 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE-----EETT
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE-----ecCC
Confidence            3456999999999999999999999999999999996432      3466899999999999999999999     5556


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+|||||+|+|.+++..    ...+++..++.|+.||+.||.|||+++
T Consensus       107 ~~~lv~e~~~~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~~  152 (329)
T 3gbz_A          107 RLHLIFEYAENDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSRR  152 (329)
T ss_dssp             EEEEEEECCSEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            6999999999999999986    567999999999999999999999998

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=7.5e-31  Score=237.33  Aligned_cols=225  Identities=36%  Similarity=0.616  Sum_probs=145.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCC--CCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTD--KEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~--~~~~~  154 (335)
                      ..++|++.+.||+|+||.||+|+++.+++.||||++..+.   ....+|+..++.++||||++++++|.....  ....+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  100 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY  100 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence            3457999999999999999999999999999999986543   345677777888899999999999975432  34556


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH--hCC------------cC--hHHhHhhhc----
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH--NCI------------VD--QLVEIIKVL----  214 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH--~~~------------~~--~~~~~~~~~----  214 (335)
                      +++||||++|+|...+.........+++..++.++.||+.||.|||  +++            ++  .....+..+    
T Consensus       101 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~  180 (360)
T 3e3p_A          101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK  180 (360)
T ss_dssp             EEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred             EEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence            8899999999888777765555778999999999999999999999  776            10  000001111    


Q ss_pred             ------------CCCC---HHHhh----------------------hhCCCCCC--------------------------
Q 019844          215 ------------GTPT---REEIK----------------------CMNPNYTE--------------------------  231 (335)
Q Consensus       215 ------------g~~~---~~~~~----------------------~~~~~~~~--------------------------  231 (335)
                                  |++.   ++.+.                      .+.+.|..                          
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (360)
T 3e3p_A          181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLN  260 (360)
T ss_dssp             CCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             ecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcc
Confidence                        1111   11110                      00011100                          


Q ss_pred             -----CCCCCCCCCccccccc---cCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCC-CCCC
Q 019844          232 -----FKFPQIKPHPWHKVFQ---KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLP-PLFN  302 (335)
Q Consensus       232 -----~~~~~~~~~~~~~~~~---~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~-~~~~  302 (335)
                           ..+......+|...++   ...++++.+||.+||+.||.+|||+.|+|+||||++...+....+....++ .++.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~  340 (360)
T 3e3p_A          261 PSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFR  340 (360)
T ss_dssp             TTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTTCCCTTSCCCCGGGGC
T ss_pred             cchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCccccCCCCCCCCcHHHH
Confidence                 0000011111222221   235789999999999999999999999999999999988877666554444 3334


Q ss_pred             CC
Q 019844          303 FK  304 (335)
Q Consensus       303 ~~  304 (335)
                      |.
T Consensus       341 ~~  342 (360)
T 3e3p_A          341 FL  342 (360)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=3.7e-30  Score=232.16  Aligned_cols=238  Identities=24%  Similarity=0.403  Sum_probs=169.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|.+.+.||+|+||.||+|.+..+|+.||||++....     ..+.+|+.+++.++||||+++++++..........
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            3456999999999999999999999999999999996422     34568999999999999999999885433233466


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HHh------------
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LVE------------  209 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~~------------  209 (335)
                      +|+||||+.|+|.+++..     +.+++..++.++.||+.||.|||++|            ++. ...            
T Consensus        89 ~~lv~e~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A           89 VYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             EEEEECCCSEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccCccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            899999999999998874     56999999999999999999999998            000 000            


Q ss_pred             ---------------HhhhcCCCC---HHHhh----------------------hhCCCCCCCC----------------
Q 019844          210 ---------------IIKVLGTPT---REEIK----------------------CMNPNYTEFK----------------  233 (335)
Q Consensus       210 ---------------~~~~~g~~~---~~~~~----------------------~~~~~~~~~~----------------  233 (335)
                                     ....+|++.   ++.+.                      .+.+.|....                
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (353)
T 2b9h_A          164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH  243 (353)
T ss_dssp             ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence                           000122222   22111                      0111111000                


Q ss_pred             -------------------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCC
Q 019844          234 -------------------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNG  294 (335)
Q Consensus       234 -------------------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~  294 (335)
                                         .+......+.. ..+.+++++.+||.+||+.||++|||+.++|+||||+....+...... 
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~~~~~~-  321 (353)
T 2b9h_A          244 SDNDLRCIESPRAREYIKSLPMYPAAPLEK-MFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEG-  321 (353)
T ss_dssp             STTTTTTCCCHHHHHHHHTSCCCCCCCHHH-HSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSSCCC-
T ss_pred             hhccccccccchhhHHhhcccCCCCcchhh-hcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCccccccc-
Confidence                               00000001111 124789999999999999999999999999999999999887765433 


Q ss_pred             CCCC-CCCCCCcccCCCCCHHHHhhcChHHHh
Q 019844          295 RPLP-PLFNFKPPELSGIPPETINRLIPEHAR  325 (335)
Q Consensus       295 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (335)
                      .++| ..+.|+ .....+..+.+++++++++.
T Consensus       322 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  352 (353)
T 2b9h_A          322 EPIPPSFFEFD-HYKEALTTKDLKKLIWNEIF  352 (353)
T ss_dssp             CCCCGGGGGGG-CCSSCCCHHHHHHHHHHHHT
T ss_pred             CCCCcceeeec-chhhcCCHHHHHHHHHHHhh
Confidence            4444 445555 45667889999999988763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=4.3e-31  Score=232.79  Aligned_cols=117  Identities=19%  Similarity=0.268  Sum_probs=97.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .+++++++||+|+||+||+|+..     .+++.||||+++..     .+.+.+|+.+|++|+|||||++++++     ..
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~-----~~  100 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV-----TK  100 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CS
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE-----EE
Confidence            35888999999999999999864     46789999999642     25688999999999999999999999     44


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHh------------hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYS------------RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|||||||++ +|.++|....            .....+++.++..|+.||+.||+|||+++
T Consensus       101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~  165 (308)
T 4gt4_A          101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH  165 (308)
T ss_dssp             SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4458899999995 9999997422            11346999999999999999999999988

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=1.9e-30  Score=232.48  Aligned_cols=196  Identities=24%  Similarity=0.328  Sum_probs=143.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++++.||+|+||.||+|+++.+|+.||+|++.+.       ...+.+|+.+|+.++||||++++++|     ....+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~~   79 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSSE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCCE
Confidence            4699999999999999999999999999999999643       24567899999999999999999999     55567


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHh---------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEII---------  211 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~---------  211 (335)
                      +|+||||++| +|..++..    .+.+++..++.++.||+.||+|||++|+            +. ....+         
T Consensus        80 ~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            9999999996 99998876    5679999999999999999999999981            00 00001         


Q ss_pred             --------hhcCCCCHHHhhhhC-CCCCC----------------CCCCCCCCCc---------cccccccCCChHHHHH
Q 019844          212 --------KVLGTPTREEIKCMN-PNYTE----------------FKFPQIKPHP---------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       212 --------~~~g~~~~~~~~~~~-~~~~~----------------~~~~~~~~~~---------~~~~~~~~~s~~~~~l  257 (335)
                              ..+|++.+....... ..|..                ...+......         -...++..+++++.+|
T Consensus       156 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  235 (337)
T 1o6l_A          156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL  235 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred             ccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence                    112222211100000 00000                0000000000         0012456789999999


Q ss_pred             HHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+||     ++.++++||||..+.+
T Consensus       236 i~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~  269 (337)
T 1o6l_A          236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCH
Confidence            9999999999999     8999999999988754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=1.1e-30  Score=236.20  Aligned_cols=196  Identities=20%  Similarity=0.257  Sum_probs=145.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----------hhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------RYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ...++|.+++.||+|+||.||+|.++.+|+.||+|++.+..          ..+.+|+.+|+.++||||++++++|    
T Consensus         9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~----   84 (361)
T 2yab_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY----   84 (361)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE----
T ss_pred             ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE----
Confidence            44567999999999999999999999999999999996432          3577999999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hH----HhH
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QL----VEI  210 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~----~~~  210 (335)
                       .....+|+|||||+| +|.+++..    .+.+++..++.++.||+.||.|||++|            +. ..    ...
T Consensus        85 -~~~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vk  159 (361)
T 2yab_A           85 -ENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK  159 (361)
T ss_dssp             -ECSSEEEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEE
T ss_pred             -EeCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEE
Confidence             556679999999985 99999875    667999999999999999999999998            10 00    001


Q ss_pred             hhh----------------cCCCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCcc
Q 019844          211 IKV----------------LGTPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPW  242 (335)
Q Consensus       211 ~~~----------------~g~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~  242 (335)
                      +..                +|++.   ++.+...  .|..                  ..+...           ....+
T Consensus       160 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~  237 (361)
T 2yab_A          160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF  237 (361)
T ss_dssp             ECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC
T ss_pred             EEecCCceEcCCCCccccCCCCccEECchHHcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC
Confidence            111                22222   1111100  0100                  000000           00112


Q ss_pred             ccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          243 HKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ...++..+++++++||.+||+.||.+|||+.++|+||||+...
T Consensus       238 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          238 DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            2233467899999999999999999999999999999998653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=2.4e-30  Score=235.18  Aligned_cols=242  Identities=20%  Similarity=0.237  Sum_probs=162.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|++++.||+|+||.||+|.+..+++.||||++...      ...+.+|+.+++.++||||+++++++..... ...
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            345799999999999999999999999999999999642      2456789999999999999999999854321 223


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C---------------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D---------------  205 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~---------------  205 (335)
                      ..+|+|||||+|+|.+++.      ..+++..++.++.||+.||.|||++++            +               
T Consensus       103 ~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  176 (371)
T 2xrw_A          103 QDVYIVMELMDANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  176 (371)
T ss_dssp             CEEEEEEECCSEEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred             cceEEEEEcCCCCHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence            4689999999998888774      359999999999999999999999980            0               


Q ss_pred             --hHHhHhhhcCCCC---HHHhhh---------------------hCCCCCCCC--------------------------
Q 019844          206 --QLVEIIKVLGTPT---REEIKC---------------------MNPNYTEFK--------------------------  233 (335)
Q Consensus       206 --~~~~~~~~~g~~~---~~~~~~---------------------~~~~~~~~~--------------------------  233 (335)
                        .........|++.   ++.+..                     +.+.|....                          
T Consensus       177 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (371)
T 2xrw_A          177 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  256 (371)
T ss_dssp             -------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHH
T ss_pred             cccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence              0000011123322   222111                     011110000                          


Q ss_pred             -------CCCCCCCccccccc-----------cCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCC
Q 019844          234 -------FPQIKPHPWHKVFQ-----------KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGR  295 (335)
Q Consensus       234 -------~~~~~~~~~~~~~~-----------~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~  295 (335)
                             .+......+...++           ...++++++||.+||+.||++|||+.++|+||||+....+.....   
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~---  333 (371)
T 2xrw_A          257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEA---  333 (371)
T ss_dssp             HHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCHHHHTC---
T ss_pred             HHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCccccCC---
Confidence                   00000000000110           012568999999999999999999999999999998766433211   


Q ss_pred             CCCCCCCCCcccCCCCCHHHHhhcChHHHhhccccc
Q 019844          296 PLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFM  331 (335)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  331 (335)
                      +.|.+.... .+......+.|+++++.++......|
T Consensus       334 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (371)
T 2xrw_A          334 PPPKIPDKQ-LDEREHTIEEWKELIYKEVMDLEHHH  368 (371)
T ss_dssp             CCCCCCTTT-TCCCCCCHHHHHHHHHHHHHHHCC--
T ss_pred             CCCCCCChh-hccccCcHHHHHHHHHHHHHHHhhhc
Confidence            112222222 34556788999999999998866554

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=2.2e-29  Score=227.92  Aligned_cols=235  Identities=20%  Similarity=0.355  Sum_probs=165.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---------------hhHHHHHHHHHhCCCCceeeeceeee
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---------------RYKNRELQIMQMLDHPNIVALKHCFF  145 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------------~~~~~Ei~~l~~l~hpnIv~~~~~~~  145 (335)
                      .++|.+++.||+|+||.||+|.+. +|+.||||++....               +.+.+|+.+++.++||||+++++++.
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             ccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            456999999999999999999985 49999999985321               45779999999999999999999997


Q ss_pred             eCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-h------
Q 019844          146 STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-Q------  206 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~------  206 (335)
                      ........++|+||||++|+|.+++..   ....+++..++.++.||+.||.|||++++            + .      
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~  176 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRTDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC  176 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSEEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             eccCCCcceEEEEEccCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE
Confidence            766556677999999999998888774   24579999999999999999999999980            0 0      


Q ss_pred             ----------HHhHhhhcCCCC---HHHhhh----------------------hCCCCCCC-------------------
Q 019844          207 ----------LVEIIKVLGTPT---REEIKC----------------------MNPNYTEF-------------------  232 (335)
Q Consensus       207 ----------~~~~~~~~g~~~---~~~~~~----------------------~~~~~~~~-------------------  232 (335)
                                ........|++.   ++.+..                      +.+.|...                   
T Consensus       177 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  256 (362)
T 3pg1_A          177 DFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE  256 (362)
T ss_dssp             CTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             ecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChH
Confidence                      000001112211   121110                      01111000                   


Q ss_pred             ----------------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCC
Q 019844          233 ----------------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRP  296 (335)
Q Consensus       233 ----------------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~  296 (335)
                                      .........|.. ....+++.+.+||.+||+.||.+|||+.++|+||||+.+..|....   ..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~---~~  332 (362)
T 3pg1_A          257 DVVMFSSPSARDYLRNSLSNVPARAWTA-VVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLT---EG  332 (362)
T ss_dssp             HHHHTSCHHHHHHTTTCCCCCCCCCHHH-HSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCGGGGT---TT
T ss_pred             HhhhccchhhhHHHHhhcccCChhhHHh-hCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCccccc---cc
Confidence                            000001111111 2256789999999999999999999999999999999987665432   23


Q ss_pred             CCCCCCCCcccCCCCCHHHHhhcChHHHhh
Q 019844          297 LPPLFNFKPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +...+.|.   ....+...+.+.+.+|+.+
T Consensus       333 ~~~~~~~~---~~~~~~~~~~~~~~~e~~~  359 (362)
T 3pg1_A          333 LSERFHFD---ESVTDVYDMHKIFTAEVER  359 (362)
T ss_dssp             CCCCCCCC---TTCCCHHHHHHHHHHHHHH
T ss_pred             cccccChh---hhhhhHHHHHHHHHHHHHH
Confidence            44455555   3666778888888887654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=1.4e-30  Score=234.74  Aligned_cols=197  Identities=25%  Similarity=0.379  Sum_probs=143.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      ...++|++++.||+|+||.||+|+++.+++.||||++.+.       ...+.+|+.+++.+ +||||++++++|     .
T Consensus        20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~   94 (353)
T 3txo_A           20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----Q   94 (353)
T ss_dssp             ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----E
T ss_pred             CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----E
Confidence            3445799999999999999999999999999999999753       24467899999998 799999999999     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C------------
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D------------  205 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~------------  205 (335)
                      ...++|+|||||+| +|..++..    .+.+++..++.|+.||+.||+|||++++            +            
T Consensus        95 ~~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~  170 (353)
T 3txo_A           95 TPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM  170 (353)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             eCCEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccc
Confidence            56679999999996 99999886    5679999999999999999999999980            0            


Q ss_pred             ------hHHhHhhhcCCCC---HHHhhhhCC------------------CCCCCCCCCCCCC-------ccccccccCCC
Q 019844          206 ------QLVEIIKVLGTPT---REEIKCMNP------------------NYTEFKFPQIKPH-------PWHKVFQKRLP  251 (335)
Q Consensus       206 ------~~~~~~~~~g~~~---~~~~~~~~~------------------~~~~~~~~~~~~~-------~~~~~~~~~~s  251 (335)
                            ........+|++.   ++.+.....                  ...+  +......       .....++..++
T Consensus       171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~P--f~~~~~~~~~~~i~~~~~~~p~~~~  248 (353)
T 3txo_A          171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP--FEAENEDDLFEAILNDEVVYPTWLH  248 (353)
T ss_dssp             CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCS--SCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred             eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCC--CCCCCHHHHHHHHHcCCCCCCCCCC
Confidence                  0011112334433   121110000                  0000  1000000       00122456789


Q ss_pred             hHHHHHHHHhccCCCCCCCCH------HHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTA------LEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~------~~~L~hp~f~~~~~  286 (335)
                      +++.+||++||+.||.+||++      .++++||||+.+.+
T Consensus       249 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w  289 (353)
T 3txo_A          249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDW  289 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCH
Confidence            999999999999999999998      99999999998765

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=1.3e-29  Score=222.32  Aligned_cols=113  Identities=27%  Similarity=0.434  Sum_probs=99.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++++.||+|+||.||+|++ .+++.||+|++...      ...+.+|+.+++.++||||+++++++     ....++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE-----ccCCeE
Confidence            4699999999999999999999 68999999998532      24567999999999999999999999     444568


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++++|.+++...   .+.+++..++.++.||+.||.|||+++
T Consensus        76 ~lv~e~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  120 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRR  120 (288)
T ss_dssp             EEEEECCSEEHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEecCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999998888752   367999999999999999999999998

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=6.4e-30  Score=231.41  Aligned_cols=114  Identities=25%  Similarity=0.347  Sum_probs=103.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++++.||+|+||.||+|+++.+++.||||++...   ...+.+|+.+++.++||||+++++++     .....+|+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~~~~l   93 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI-----LTPTHLAI   93 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEEEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEE-----eeCCEEEE
Confidence            45699999999999999999999999999999999643   35678999999999999999999999     45556999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||+| +|.+++..    .+.+++..++.++.||+.||.|||++|
T Consensus        94 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~~  136 (361)
T 3uc3_A           94 IMEYASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSMQ  136 (361)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999985 99999876    567999999999999999999999998

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=1e-29  Score=231.02  Aligned_cols=235  Identities=24%  Similarity=0.390  Sum_probs=163.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC-Cc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK-EE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~-~~  152 (335)
                      ...+|.+.+.||+|+||.||+|.++.+|+.||||++...      ...+.+|+.+++.++||||+++++++...... ..
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            445799999999999999999999999999999999643      24567999999999999999999999543321 11


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-h-HH----------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-Q-LV----------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~-~~----------  208 (335)
                      ..+|+||||+.|+|.+++.      ..+++..++.++.||+.||.|||++++            + . ..          
T Consensus       120 ~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  193 (371)
T 4exu_A          120 YDFYLVMPFMQTDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH  193 (371)
T ss_dssp             CCCEEEEECCCEEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred             eeEEEEEccccccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence            2248999999999877763      459999999999999999999999980            0 0 00          


Q ss_pred             ---hHhhhcCCCC---HHHhhh----------------------hCCCCCCCC---------------------------
Q 019844          209 ---EIIKVLGTPT---REEIKC----------------------MNPNYTEFK---------------------------  233 (335)
Q Consensus       209 ---~~~~~~g~~~---~~~~~~----------------------~~~~~~~~~---------------------------  233 (335)
                         ......|++.   ++.+..                      +.+.|....                           
T Consensus       194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  273 (371)
T 4exu_A          194 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA  273 (371)
T ss_dssp             ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred             cccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence               0011123332   121110                      001110000                           


Q ss_pred             -------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          234 -------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       234 -------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                             .+......+.. ++..+++++.+||.+||+.||.+|||+.++|+||||+.+..+........++..     ..
T Consensus       274 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~~~~~~~~~~-----~~  347 (371)
T 4exu_A          274 AKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDD-----SL  347 (371)
T ss_dssp             HHHHHHHSCCCCCCCHHH-HSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGGCCCCSSCCCC-----TT
T ss_pred             hhhhhhccCCCcchhHHH-hccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCCCcccccccccCcCc-----ch
Confidence                   00000011111 124679999999999999999999999999999999998876655433222221     13


Q ss_pred             cCCCCCHHHHhhcChHHHhh
Q 019844          307 ELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +...+..+.|++.+++++..
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~  367 (371)
T 4exu_A          348 EHEKLTVDEWKQHIYKEIVN  367 (371)
T ss_dssp             SSCCCCHHHHHHHHHHHHHH
T ss_pred             hhcccchHHHHHHHHHHHHh
Confidence            45667888999999987765

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.1e-29  Score=225.94  Aligned_cols=117  Identities=26%  Similarity=0.436  Sum_probs=90.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .+|++++.||+|+||.||+|.++.+++.||+|++...     ...+.+|+.+++.++||||+++++++     .....+|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~   79 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKLT   79 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEEE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeEE
Confidence            4699999999999999999999999999999999642     24577999999999999999999999     5566799


Q ss_pred             EEeecchhhHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSR--IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||||+|+|.+++.....  ....+++..++.++.||+.||.|||++|
T Consensus        80 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~  128 (317)
T 2pmi_A           80 LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK  128 (317)
T ss_dssp             EEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999999876431  1245999999999999999999999998

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=4.3e-30  Score=230.03  Aligned_cols=196  Identities=24%  Similarity=0.316  Sum_probs=144.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|.+.+.||+|+||.||+|.+..+++.||||++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~   81 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI-----TTP   81 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeC
Confidence            445799999999999999999999999999999998642       24578999999999999999999999     455


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHh--------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEII--------  211 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~--------  211 (335)
                      ..+|+||||++|+|.+++..    .+.+++..++.++.||+.||.|||++|+            +. ....+        
T Consensus        82 ~~~~lv~E~~~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~  157 (336)
T 3h4j_B           82 TDIVMVIEYAGGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI  157 (336)
T ss_dssp             SEEEEEECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBT
T ss_pred             CEEEEEEECCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEecccee
Confidence            56999999998899888876    5679999999999999999999999880            00 00001        


Q ss_pred             --------hhcCCCCHHHhh-------------------------hhCCCCCCCCCCCCCCC--ccccccccCCChHHHH
Q 019844          212 --------KVLGTPTREEIK-------------------------CMNPNYTEFKFPQIKPH--PWHKVFQKRLPPEAVD  256 (335)
Q Consensus       212 --------~~~g~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~  256 (335)
                              ..+|++.+....                         .+.+.|...........  .....++..+++++.+
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~  237 (336)
T 3h4j_B          158 MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQS  237 (336)
T ss_dssp             TTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHH
T ss_pred             ccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHH
Confidence                    112332211100                         01111111000000000  0011244568999999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ||++||+.||.+|||+.|+++||||+..
T Consensus       238 li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          238 LIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             HHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            9999999999999999999999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1e-29  Score=232.50  Aligned_cols=118  Identities=22%  Similarity=0.355  Sum_probs=104.2

Q ss_pred             cceeeeEEeeeeecc--CceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTG--SFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G--~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...++|++++.||+|  +||.||+|+++.+++.||||++....      ..+.+|+.+++.++|||||+++++|     .
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~   96 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF-----I   96 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEE-----E
Confidence            455679999999999  99999999999999999999996432      4567899999999999999999999     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+|+|||||+| +|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~  148 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMG  148 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55569999999995 9999998632  366999999999999999999999998

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.97  E-value=1.2e-29  Score=224.55  Aligned_cols=122  Identities=25%  Similarity=0.402  Sum_probs=102.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCC---CCceeeeceeeeeC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLD---HPNIVALKHCFFST  147 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~  147 (335)
                      ...+|++++.||+|+||.||+|+++.+++.||||++...         .....+|+.+++.++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            345799999999999999999999999999999998632         135678888887774   99999999999765


Q ss_pred             CCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          148 TDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ......++++||||++|+|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~  140 (308)
T 3g33_A           87 RTDREIKVTLVFEHVDQDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHANC  140 (308)
T ss_dssp             CSSSEEEEEEEEECCCCBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCceeEEEEehhhhcCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            545556789999999999999988632  234999999999999999999999998

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.97  E-value=3.9e-30  Score=230.63  Aligned_cols=195  Identities=18%  Similarity=0.179  Sum_probs=136.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCC-----CcEEEEEEeccc-----chhHHHHHHHHHhCCC-CceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRET-----GEIVAIKKVLQD-----KRYKNRELQIMQMLDH-PNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~h-pnIv~~~~~~~~~~  148 (335)
                      ..++|++++.||+|+||+||+|.++.+     ++.||||.+...     .+.+.+|+.+|++++| ||||++++++..  
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~--  139 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--  139 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC--
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe--
Confidence            346799999999999999999998654     368999999643     2457899999999965 999999999843  


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhh------------cCCCCHHHHHHHHHHHHHHHHHHHhCC------------
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRI------------HQRMPLIYVKLYTYQICRALAYIHNCI------------  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~aL~yLH~~~------------  203 (335)
                        ....+|||||||+| +|.++|+.....            ...+++.++..|+.||+.||+|||+++            
T Consensus       140 --~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          140 --PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             --TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             --cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence              23348899999995 999999864321            245899999999999999999999998            


Q ss_pred             cC-h---------HH----------hHhhhcCCCC---HHHhhh----------------------hCCCCCCCCCCCC-
Q 019844          204 VD-Q---------LV----------EIIKVLGTPT---REEIKC----------------------MNPNYTEFKFPQI-  237 (335)
Q Consensus       204 ~~-~---------~~----------~~~~~~g~~~---~~~~~~----------------------~~~~~~~~~~~~~-  237 (335)
                      ++ .         +.          .....+||+.   ||.+..                      +.+.|........ 
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~  297 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  297 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            00 0         00          0011223332   222111                      1111211100000 


Q ss_pred             ---CCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcC
Q 019844          238 ---KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVH  278 (335)
Q Consensus       238 ---~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~h  278 (335)
                         -........|..+++++.+||.+||+.||++|||+.++++|
T Consensus       298 ~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          298 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence               00011223456789999999999999999999999999987

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.97  E-value=3.3e-30  Score=226.40  Aligned_cols=111  Identities=17%  Similarity=0.251  Sum_probs=94.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .+++.++++||+|+||+||+|+++   ..||||+++..      .+.+.+|+.+|++++|||||++++++.     . ..
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-----~-~~  105 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-----K-DN  105 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----S-SS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----C-Ce
Confidence            346889999999999999999874   35999998632      245789999999999999999999872     2 23


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||||||+| +|.+++...   ...+++.++..|+.||+.||+|||+++
T Consensus       106 ~~iVmEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~  152 (307)
T 3omv_A          106 LAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN  152 (307)
T ss_dssp             CEEEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7899999995 999998742   457999999999999999999999988

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.1e-29  Score=226.81  Aligned_cols=116  Identities=28%  Similarity=0.488  Sum_probs=97.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...+|++++.||+|+||.||+|.++.+|+.||||++...         ...+.+|+.+++.++||||+++++++     .
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~   82 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF-----G   82 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE-----e
Confidence            345799999999999999999999999999999998632         13567999999999999999999999     4


Q ss_pred             CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+++||||++|+|..++..   ....+++..++.++.||+.||.|||+++
T Consensus        83 ~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~  132 (346)
T 1ua2_A           83 HKSNISLVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQHW  132 (346)
T ss_dssp             CTTCCEEEEECCSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             eCCceEEEEEcCCCCHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5556889999999998888764   2356999999999999999999999998

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=8.7e-30  Score=228.77  Aligned_cols=198  Identities=19%  Similarity=0.229  Sum_probs=146.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ...++|++++.||+|+||.||+|.++.+++.||||++.+......+|++++.++ +||||+++++++     .+..++|+
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~l   93 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVY-----DDGKYVYV   93 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEE-----EcCCEEEE
Confidence            345679999999999999999999999999999999987777778999999888 799999999999     56667999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c-Ch----HHhHhhh------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V-DQ----LVEIIKV------  213 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~-~~----~~~~~~~------  213 (335)
                      |||||.| +|.+.+..    .+.+++..++.++.||+.||.|||++|            + +.    ....+..      
T Consensus        94 v~E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           94 VTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             EECCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            9999986 99998875    567999999999999999999999998            0 00    0011111      


Q ss_pred             -----------cCCCC---HHHhh---------------------hhCCCCCCCCCCCC---------CCCccccccccC
Q 019844          214 -----------LGTPT---REEIK---------------------CMNPNYTEFKFPQI---------KPHPWHKVFQKR  249 (335)
Q Consensus       214 -----------~g~~~---~~~~~---------------------~~~~~~~~~~~~~~---------~~~~~~~~~~~~  249 (335)
                                 +|++.   ++.+.                     .+.+.|........         ....+...++..
T Consensus       170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  249 (342)
T 2qr7_A          170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS  249 (342)
T ss_dssp             CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTT
T ss_pred             CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccccc
Confidence                       12221   11110                     01111110000000         000111123357


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +++++++||++||+.||++|||+.++|+||||....
T Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~~  285 (342)
T 2qr7_A          250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD  285 (342)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTGG
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCcc
Confidence            899999999999999999999999999999997653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=6.2e-29  Score=220.20  Aligned_cols=113  Identities=35%  Similarity=0.614  Sum_probs=100.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++++.||+|+||.||+|.+..+|+.||||++....      +.+.+|+.+++.++||||+++++++     .....+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   77 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF-----RRKRRL   77 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee-----ecCCeE
Confidence            46999999999999999999999999999999985432      3466899999999999999999999     555668


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||||+| +|..++..    ...+++..++.++.||+.||.|||++|
T Consensus        78 ~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~  122 (311)
T 4agu_A           78 HLVFEYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKHN  122 (311)
T ss_dssp             EEEEECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999997 77777664    567999999999999999999999998

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=5.8e-30  Score=230.87  Aligned_cols=199  Identities=28%  Similarity=0.317  Sum_probs=144.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc---------cchhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ---------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~---------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ...++|++.+.||+|+||.||+|.++.+++.||||++..         ....+.+|+.+++.++||||+++++++     
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----   95 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY-----   95 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE-----
Confidence            345679999999999999999999999999999999853         134578999999999999999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC--hHH--hHhh
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD--QLV--EIIK  212 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~--~~~--~~~~  212 (335)
                      .....+|+|||||+| +|.+.+.........+++..++.++.||+.||.|||+++            ++  ...  ..+.
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~  175 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG  175 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEe
Confidence            455669999999995 998888765544556999999999999999999999998            10  000  0011


Q ss_pred             h-----------------cCCCC---HHHhhhhCCCCCC------------------CCCCCCC----------CCcccc
Q 019844          213 V-----------------LGTPT---REEIKCMNPNYTE------------------FKFPQIK----------PHPWHK  244 (335)
Q Consensus       213 ~-----------------~g~~~---~~~~~~~~~~~~~------------------~~~~~~~----------~~~~~~  244 (335)
                      .                 +|++.   ++.+...  .|..                  ..+....          ...+..
T Consensus       176 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~~~~~  253 (351)
T 3c0i_A          176 GFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE--PYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNP  253 (351)
T ss_dssp             CCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCCCCCH
T ss_pred             cCcceeEecCCCeeecCCcCCcCccCHHHHcCC--CCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCCCCCc
Confidence            1                 12222   1111100  0000                  0000000          000111


Q ss_pred             ccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          245 VFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ..+..+++++++||.+||+.||++|||+.++|+||||+..
T Consensus       254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            1225689999999999999999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=2.3e-29  Score=229.71  Aligned_cols=198  Identities=22%  Similarity=0.363  Sum_probs=145.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..++|+++++||+|+||+||+|+++.+++.||+|++++.       ...+.+|+.++..+ +|||||+++++|     ..
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~  124 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QT  124 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----EC
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EE
Confidence            345699999999999999999999999999999999753       23467899999887 899999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--HH--------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--LV--------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--~~--------  208 (335)
                      ...+|+|||||+| +|..++..    .+.+++..++.|+.||+.||.|||++++            +.  ..        
T Consensus       125 ~~~~~lV~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla  200 (396)
T 4dc2_A          125 ESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMC  200 (396)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeeccee
Confidence            6679999999996 99998886    5679999999999999999999999980            00  00        


Q ss_pred             --------hHhhhcCCCC---HHHhhh---------------------hCCCCCCCCCCCC-CCC----------ccccc
Q 019844          209 --------EIIKVLGTPT---REEIKC---------------------MNPNYTEFKFPQI-KPH----------PWHKV  245 (335)
Q Consensus       209 --------~~~~~~g~~~---~~~~~~---------------------~~~~~~~~~~~~~-~~~----------~~~~~  245 (335)
                              .....+||+.   ++.+..                     +.+.|........ ...          .....
T Consensus       201 ~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~  280 (396)
T 4dc2_A          201 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR  280 (396)
T ss_dssp             BCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC
T ss_pred             eecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC
Confidence                    0111233332   111110                     1111110000000 000          00123


Q ss_pred             cccCCChHHHHHHHHhccCCCCCCCCH------HHHhcCcccccCCC
Q 019844          246 FQKRLPPEAVDLVCRFFQYSPNLRCTA------LEACVHPFFDELRD  286 (335)
Q Consensus       246 ~~~~~s~~~~~li~~~L~~dP~~R~t~------~~~L~hp~f~~~~~  286 (335)
                      +|..+++++++||++||+.||.+||++      .++++||||+.+.+
T Consensus       281 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w  327 (396)
T 4dc2_A          281 IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  327 (396)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCH
T ss_pred             CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCH
Confidence            556789999999999999999999985      89999999998765

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=1.8e-29  Score=229.59  Aligned_cols=197  Identities=21%  Similarity=0.305  Sum_probs=145.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||.||+|.++.+++.||+|++.+.       ...+.+|+.+|+.++|||||+++++|     ....
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~   88 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEE   88 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence            45799999999999999999999999999999999643       24567999999999999999999999     5556


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--------------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--------------  206 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--------------  206 (335)
                      .+|+|||||.| +|..++..    ...+++..++.|+.||+.||.|||++|+            +.              
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence            69999999986 99999875    5679999999999999999999999980            00              


Q ss_pred             ---HHhHhhhcCCCCHHHhhhhC----CCCCC------------------CCCCCCCCCc----------cccccccCCC
Q 019844          207 ---LVEIIKVLGTPTREEIKCMN----PNYTE------------------FKFPQIKPHP----------WHKVFQKRLP  251 (335)
Q Consensus       207 ---~~~~~~~~g~~~~~~~~~~~----~~~~~------------------~~~~~~~~~~----------~~~~~~~~~s  251 (335)
                         .......+|++.+.......    ..|..                  ..+.......          ....++..++
T Consensus       165 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s  244 (384)
T 4fr4_A          165 LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWS  244 (384)
T ss_dssp             CCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSC
T ss_pred             ccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCC
Confidence               00001122333211111110    00100                  0000000000          0012456789


Q ss_pred             hHHHHHHHHhccCCCCCCCC-HHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCT-ALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t-~~~~L~hp~f~~~~~  286 (335)
                      +++.+||.+||+.||.+||+ +.++++||||..+.+
T Consensus       245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w  280 (384)
T 4fr4_A          245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINW  280 (384)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCH
Confidence            99999999999999999998 899999999998765

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.97  E-value=3.9e-30  Score=229.71  Aligned_cols=196  Identities=20%  Similarity=0.269  Sum_probs=144.1

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ...++|.+.+.||+|+||.||+|.++.+++.||+|++.+.          ...+.+|+.+|+.++||||+++++++    
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----   83 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY----   83 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE----
Confidence            4456799999999999999999999999999999999642          24577999999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-H----HhH
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-L----VEI  210 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~----~~~  210 (335)
                       .....+|+|||||+| +|.+++..    ...+++..++.++.||+.||.|||+++            +.. .    ...
T Consensus        84 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~k  158 (326)
T 2y0a_A           84 -ENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIK  158 (326)
T ss_dssp             -ECSSEEEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEE
T ss_pred             -EeCCEEEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEE
Confidence             555669999999985 99999875    567999999999999999999999998            000 0    001


Q ss_pred             hhh----------------cCCCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCcc
Q 019844          211 IKV----------------LGTPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPW  242 (335)
Q Consensus       211 ~~~----------------~g~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~  242 (335)
                      +..                +|++.   ++.+...  .|..                  ..+...           ....+
T Consensus       159 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~  236 (326)
T 2y0a_A          159 IIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF  236 (326)
T ss_dssp             ECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCC
T ss_pred             EEECCCCeECCCCCccccccCCcCcCCceeecCC--CCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCc
Confidence            111                12222   1111100  0000                  000000           00011


Q ss_pred             ccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          243 HKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ....+..+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus       237 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          237 EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             CccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            1122356899999999999999999999999999999998653

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.96  E-value=7.3e-29  Score=218.49  Aligned_cols=115  Identities=31%  Similarity=0.563  Sum_probs=100.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++.+.||+|+||.||+|+++.+++.||||++...      ...+.+|+.+++.++||||+++++++     .....+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   77 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKL   77 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEE-----ecCCce
Confidence            4599999999999999999999999999999998642      24577999999999999999999999     445568


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||+.|+|.+++....  ...+++..++.++.||+.||.|||++|
T Consensus        78 ~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~  123 (299)
T 2r3i_A           78 YLVFEFLHQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHR  123 (299)
T ss_dssp             EEEEECCSEEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEcccCCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999999988633  356899999999999999999999998

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=1.3e-29  Score=228.22  Aligned_cols=195  Identities=25%  Similarity=0.345  Sum_probs=144.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||.||+|+++.+|+.||||++.+.       ...+.+|+.+|+.++||||+++++++     .+..
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcCC
Confidence            34699999999999999999999999999999999643       24567899999999999999999999     5566


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHhH--------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVEI--------  210 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~~--------  210 (335)
                      ++|+||||++| +|.+++..    .+.+++..++.|+.||+.||.|||++|            ++.  ..++        
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccccee
Confidence            79999999985 99999986    567999999999999999999999998            000  0000        


Q ss_pred             -----hhhcCCCC---HHHhhhhCCCCCC------------------CCCCCCCCC-------ccccccccCCChHHHHH
Q 019844          211 -----IKVLGTPT---REEIKCMNPNYTE------------------FKFPQIKPH-------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       211 -----~~~~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~~~~~l  257 (335)
                           ...+|++.   ++.+...  .|..                  ..+......       .....++..+++++.+|
T Consensus       191 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l  268 (350)
T 1rdq_E          191 VKGRTWTLCGTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDL  268 (350)
T ss_dssp             CSSCBCCCEECGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHH
T ss_pred             ccCCcccccCCccccCHHHhcCC--CCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence                 01123332   1111100  0100                  000000000       00112456789999999


Q ss_pred             HHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+||+     +.++++||||+...+
T Consensus       269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             HHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence            99999999999998     999999999988654

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.96  E-value=6.7e-29  Score=217.48  Aligned_cols=120  Identities=24%  Similarity=0.349  Sum_probs=107.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ...++|.+.+.||+|+||.||+|.++.++..+|+|++....     ..+.+|+.+++.++||||+++++++     ....
T Consensus        19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~   93 (285)
T 3is5_A           19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-----EDYH   93 (285)
T ss_dssp             CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred             ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe-----ecCC
Confidence            45568999999999999999999999999999999986432     5578999999999999999999999     5556


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++| +|.+++.........+++..++.|+.||+.||.|||+++
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  144 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH  144 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68999999996 999998876555678999999999999999999999998

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=6.2e-30  Score=227.47  Aligned_cols=195  Identities=23%  Similarity=0.393  Sum_probs=145.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||.||+|+++.+|+.||+|++.+.       ...+.+|+.+++.++||||+++++++     .+..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence            35699999999999999999999999999999999643       24567899999999999999999999     5566


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHh---------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVE---------  209 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~---------  209 (335)
                      .+|+|||||+| +|.+++..    .+.+++..++.++.||+.||.|||++|            ++.  ..+         
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~  155 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKY  155 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEEEEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCccee
Confidence            79999999996 99999986    567999999999999999999999998            000  000         


Q ss_pred             ----HhhhcCCCCH---HHhhhhCCCCCC----------------CCCCCCCCCc---------cccccccCCChHHHHH
Q 019844          210 ----IIKVLGTPTR---EEIKCMNPNYTE----------------FKFPQIKPHP---------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       210 ----~~~~~g~~~~---~~~~~~~~~~~~----------------~~~~~~~~~~---------~~~~~~~~~s~~~~~l  257 (335)
                          ....+|++.+   +.+...  .|..                ...+......         ....++..+++++.+|
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~l  233 (318)
T 1fot_A          156 VPDVTYTLCGTPDYIAPEVVSTK--PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDL  233 (318)
T ss_dssp             CSSCBCCCCSCTTTCCHHHHTTC--CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred             cCCccccccCCccccCHhHhcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence                0112344332   211110  0100                0000000000         0112456789999999


Q ss_pred             HHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+|+     +++++++||||+.+.+
T Consensus       234 i~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             HHHHhccCHHHcCCCcCCCHHHHhcCccccCCCH
Confidence            9999999999999     8999999999998754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=2.2e-30  Score=232.71  Aligned_cols=197  Identities=23%  Similarity=0.368  Sum_probs=144.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .++|.+++.||+|+||.||+|+++.+|+.||||++.+.       ...+.+|..+++.+ +||||+++++++     .+.
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~-----~~~   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF-----QTK   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----ECS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE-----EeC
Confidence            35699999999999999999999999999999999653       23467899999877 999999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-H-H---------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-L-V---------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~-~---------  208 (335)
                      .++|+|||||+| +|.+++..    .+.+++..++.|+.||+.||+|||++|+            +. . .         
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK  166 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence            679999999986 99999986    5679999999999999999999999980            00 0 0         


Q ss_pred             -------hHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCCCC-------ccccccccCCChHHH
Q 019844          209 -------EIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIKPH-------PWHKVFQKRLPPEAV  255 (335)
Q Consensus       209 -------~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~~~~  255 (335)
                             .....+|++.+....... ..|..                  ..+......       .....++..+++++.
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~  246 (345)
T 1xjd_A          167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAK  246 (345)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHH
Confidence                   001122333211111000 00100                  000000000       001224567899999


Q ss_pred             HHHHHhccCCCCCCCCHH-HHhcCcccccCCC
Q 019844          256 DLVCRFFQYSPNLRCTAL-EACVHPFFDELRD  286 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~-~~L~hp~f~~~~~  286 (335)
                      +||.+||+.||++||++. ++++||||+.+.+
T Consensus       247 ~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          247 DLLVKLFVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             HHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             HHHHHHhcCCHhHcCCChHHHHcCccccCCCH
Confidence            999999999999999998 9999999998764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.96  E-value=1.1e-29  Score=223.35  Aligned_cols=217  Identities=22%  Similarity=0.312  Sum_probs=155.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ....+|.+.+.||+|+||.||+|.+..+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~   86 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----ED   86 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EC
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee-----cc
Confidence            3456799999999999999999999999999999998643       24567899999999999999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh----
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV----  213 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~----  213 (335)
                      ...+|+||||++| +|.+++..    ...+++..++.++.||+.||.|||++++            +. ....+..    
T Consensus        87 ~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  162 (294)
T 2rku_A           87 NDFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA  162 (294)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             CCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCc
Confidence            5668999999996 99998876    5679999999999999999999999980            00 0000011    


Q ss_pred             -------------cCCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-------ccccccccCCChHH
Q 019844          214 -------------LGTPT---REEIKCMNPNYT----------------EFKFPQIKPH-------PWHKVFQKRLPPEA  254 (335)
Q Consensus       214 -------------~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~s~~~  254 (335)
                                   .|++.   ++.+........                ...+......       .....++..+++.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (294)
T 2rku_A          163 TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA  242 (294)
T ss_dssp             EECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHH
T ss_pred             eecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHH
Confidence                         12211   111110000000                0000000000       00012345688999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK  304 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~  304 (335)
                      .+||.+||+.||++|||+.++|+||||.....|.........+|+.+.+.
T Consensus       243 ~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (294)
T 2rku_A          243 ASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIA  292 (294)
T ss_dssp             HHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCCGGGGTSCCCCCSS
T ss_pred             HHHHHHHcccChhhCcCHHHHhhChheecCCcCCCCCccCCCCCCCcccC
Confidence            99999999999999999999999999998877766555555666666654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=4.9e-29  Score=224.95  Aligned_cols=235  Identities=24%  Similarity=0.401  Sum_probs=162.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC-Cc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK-EE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~-~~  152 (335)
                      ...+|.+.+.||+|+||.||+|.++.+|+.||||++...      ...+.+|+.+++.++||||+++++++...... ..
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  101 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  101 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence            345799999999999999999999999999999999642      24567899999999999999999999543211 11


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-H-H----------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-L-V----------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~-~----------  208 (335)
                      ..+|+||||+.|+|.+++.      ..+++..++.++.||+.||.|||++|+            +. . .          
T Consensus       102 ~~~~lv~e~~~~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          102 YDFYLVMPFMQTDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARH  175 (353)
T ss_dssp             CCCEEEEECCSEEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred             eeEEEEeccccCCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence            2358999999998877653      359999999999999999999999980            00 0 0          


Q ss_pred             ---hHhhhcCCCC---HHHhhh----------------------hCCCCCCCC---------------------------
Q 019844          209 ---EIIKVLGTPT---REEIKC----------------------MNPNYTEFK---------------------------  233 (335)
Q Consensus       209 ---~~~~~~g~~~---~~~~~~----------------------~~~~~~~~~---------------------------  233 (335)
                         ......|++.   ++.+..                      +.+.|....                           
T Consensus       176 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  255 (353)
T 3coi_A          176 ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA  255 (353)
T ss_dssp             --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred             CCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence               0001122222   221110                      011111000                           


Q ss_pred             -------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          234 -------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       234 -------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                             .+......+.. ....+++++.+||.+||+.||++|||+.++|+||||+....+........+    ++.. .
T Consensus       256 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~~----~~~~-~  329 (353)
T 3coi_A          256 AKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQP----FDDS-L  329 (353)
T ss_dssp             HHHHHHTSCBCSSCCTTT-TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTCCGGGCCCCSSC----CCCT-T
T ss_pred             HHHHHHhCcCCCCccHHH-hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhccCccccccCCCC----Cccc-h
Confidence                   00000111111 124679999999999999999999999999999999988776554332221    2222 3


Q ss_pred             cCCCCCHHHHhhcChHHHhh
Q 019844          307 ELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +...++.+.|++.|.+++..
T Consensus       330 ~~~~~~~~~~~~~~~~~~~~  349 (353)
T 3coi_A          330 EHEKLTVDEWKQHIYKEIVN  349 (353)
T ss_dssp             TTCCCCHHHHHHHHHHHHHT
T ss_pred             hhccCCHHHHHHHHHHHHHh
Confidence            45678889999999887764

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=1.5e-29  Score=238.91  Aligned_cols=198  Identities=24%  Similarity=0.307  Sum_probs=143.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----------------chhHHHHHHHHHhCCCCceeeece
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----------------KRYKNRELQIMQMLDHPNIVALKH  142 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----------------~~~~~~Ei~~l~~l~hpnIv~~~~  142 (335)
                      ..++|.++++||+|+||.||+|.++.+++.||||++.+.                 ...+.+|+.+|+.++|||||++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            445799999999999999999999999999999998642                 134678999999999999999999


Q ss_pred             eeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH--
Q 019844          143 CFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL--  207 (335)
Q Consensus       143 ~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~--  207 (335)
                      ++     .+..++|+|||||+| +|.+.+..    ...+++..++.|+.||+.||.|||+++            ++..  
T Consensus       114 ~~-----~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~  184 (504)
T 3q5i_A          114 VF-----EDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS  184 (504)
T ss_dssp             EE-----ECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTC
T ss_pred             EE-----EcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCC
Confidence            99     566679999999986 99998876    567999999999999999999999998            1000  


Q ss_pred             --HhHhh----------------hcCCCCHHHhhhhCCCCCC------------------CCCCCCC-----------CC
Q 019844          208 --VEIIK----------------VLGTPTREEIKCMNPNYTE------------------FKFPQIK-----------PH  240 (335)
Q Consensus       208 --~~~~~----------------~~g~~~~~~~~~~~~~~~~------------------~~~~~~~-----------~~  240 (335)
                        ...+.                .+|++.+.........|..                  ..+....           ..
T Consensus       185 ~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  264 (504)
T 3q5i_A          185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY  264 (504)
T ss_dssp             CSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             CccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence              00111                1233221111111111110                  0000000           00


Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          241 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      .+....+..+++++++||++||+.||.+|||+.++|+||||+....
T Consensus       265 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~  310 (504)
T 3q5i_A          265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN  310 (504)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred             CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence            0111123578999999999999999999999999999999987643

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=234.46  Aligned_cols=195  Identities=24%  Similarity=0.243  Sum_probs=143.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|++++.||+|+||.||+|.++.+|+.||+|++....      ..+.+|+.+++.++|||||++++++     ...
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~   82 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEE   82 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECS
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EEC
Confidence            45568999999999999999999999999999999996432      4577999999999999999999999     566


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC----hHHhHhhh--
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD----QLVEIIKV--  213 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~----~~~~~~~~--  213 (335)
                      .++|+|||||.| +|.+.+..    .+.+++..++.++.||+.||.|||++|            ++    .....+..  
T Consensus        83 ~~~~lv~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG  158 (444)
T 3soa_A           83 GHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG  158 (444)
T ss_dssp             SEEEEEECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred             CEEEEEEEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCc
Confidence            679999999996 99998886    677999999999999999999999998            11    00001111  


Q ss_pred             ---------------cCCCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCcccccc
Q 019844          214 ---------------LGTPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPWHKVF  246 (335)
Q Consensus       214 ---------------~g~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~~~~  246 (335)
                                     +|++.   ++.+...  .|..                  ..+...           ....+....
T Consensus       159 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~--~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~  236 (444)
T 3soa_A          159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKD--PYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPE  236 (444)
T ss_dssp             SCBCCCTTCCBCCCSCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred             eeEEecCCCceeecccCCcccCCHHHhcCC--CCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccc
Confidence                           22222   1111100  0100                  000000           000111122


Q ss_pred             ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          247 QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +..+++++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       237 ~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          237 WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             cccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            24689999999999999999999999999999999754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.96  E-value=2.2e-29  Score=224.52  Aligned_cols=198  Identities=21%  Similarity=0.194  Sum_probs=142.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|++++.||+|+||.||+|+++.+++.||||++...     ...+.+|+.+++.++||||+++++++     .....
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~   79 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNI   79 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecCCe
Confidence            345799999999999999999999999999999998532     25578999999999999999999999     55667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHh---------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEII---------  211 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~---------  211 (335)
                      +|+|||||+| +|.+++..    ...+++..++.++.||+.||+|||++|+            +. ....+         
T Consensus        80 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  155 (323)
T 3tki_A           80 QYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (323)
T ss_dssp             EEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeecccee
Confidence            8999999986 99888764    5579999999999999999999999980            00 00000         


Q ss_pred             ----------hhcCCCC---HHHhhh----------------------hCCCCCCCCCCCC-----CCCccccccccCCC
Q 019844          212 ----------KVLGTPT---REEIKC----------------------MNPNYTEFKFPQI-----KPHPWHKVFQKRLP  251 (335)
Q Consensus       212 ----------~~~g~~~---~~~~~~----------------------~~~~~~~~~~~~~-----~~~~~~~~~~~~~s  251 (335)
                                ..+|++.   ++.+..                      +.+.|........     .........+..++
T Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (323)
T 3tki_A          156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKID  235 (323)
T ss_dssp             EETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSC
T ss_pred             ccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCC
Confidence                      1122222   111110                      1111110000000     00000011124689


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +++.+||.+||+.||++|||+.|+|+||||+....
T Consensus       236 ~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  270 (323)
T 3tki_A          236 SAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (323)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhhChhhccccc
Confidence            99999999999999999999999999999987544

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=2.2e-29  Score=221.91  Aligned_cols=194  Identities=22%  Similarity=0.251  Sum_probs=141.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...+|++.+.||+|+||.||+|.+..+++.||||++...    ...+.+|+.+++.++||||++++++|     .....+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~   92 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDEL   92 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEE-----EECCEE
Confidence            345699999999999999999999999999999998532    34577999999999999999999999     445568


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh--------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV--------  213 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~--------  213 (335)
                      |+|||||+| +|.+++..     ..+++..++.++.||+.||.|||++++            + .....+..        
T Consensus        93 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             EEEEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEECCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            999999985 99999874     469999999999999999999999980            0 00000111        


Q ss_pred             ---------cCCCC---HHHhhhhCCCCCC----------------CCCCCCCCC------------ccccccccCCChH
Q 019844          214 ---------LGTPT---REEIKCMNPNYTE----------------FKFPQIKPH------------PWHKVFQKRLPPE  253 (335)
Q Consensus       214 ---------~g~~~---~~~~~~~~~~~~~----------------~~~~~~~~~------------~~~~~~~~~~s~~  253 (335)
                               .|++.   ++.+...  .|..                ...+.....            ......+..+++.
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (297)
T 3fxz_A          168 PEQSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAI  245 (297)
T ss_dssp             STTCCBCCCCSCGGGCCHHHHHCS--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHH
T ss_pred             CcccccCCccCCcCccChhhhcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHH
Confidence                     22221   1211100  0000                000000000            0011224568899


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +.+||.+||+.||++|||+.++|+||||+...
T Consensus       246 ~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  277 (297)
T 3fxz_A          246 FRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK  277 (297)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             HHHHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence            99999999999999999999999999998753

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=7.8e-29  Score=233.03  Aligned_cols=199  Identities=22%  Similarity=0.294  Sum_probs=145.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc------cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ------DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~------~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|++++.||+|+||.||+|.++.+++.||||++.+      ....+.+|+.+|+.++|||||++++++     ...
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~   93 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDS   93 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE-----EcC
Confidence            456789999999999999999999999999999999853      234578999999999999999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-Ch---------------HHhHhhhc-
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-DQ---------------LVEIIKVL-  214 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-~~---------------~~~~~~~~-  214 (335)
                      ..+|+|||||.| +|.+.+..    .+.+++..++.|+.||+.||.|||++|+ +.               ....+..+ 
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg  169 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred             CEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECC
Confidence            679999999996 99888876    5679999999999999999999999981 00               00001111 


Q ss_pred             ---------------CCCCHHHhhhhCCCCCC------------------CCCCCC-----------CCCccccccccCC
Q 019844          215 ---------------GTPTREEIKCMNPNYTE------------------FKFPQI-----------KPHPWHKVFQKRL  250 (335)
Q Consensus       215 ---------------g~~~~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~~~~~~~~  250 (335)
                                     |++.+.........|..                  ..+...           ....+....+..+
T Consensus       170 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  249 (486)
T 3mwu_A          170 LSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI  249 (486)
T ss_dssp             CTTTBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGS
T ss_pred             cCeECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCC
Confidence                           22211000000000100                  000000           0001111223568


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |+++++||.+||+.||.+|||+.++|+||||+....
T Consensus       250 s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            999999999999999999999999999999998653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.96  E-value=5.7e-29  Score=222.56  Aligned_cols=119  Identities=28%  Similarity=0.456  Sum_probs=102.6

Q ss_pred             CCccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           76 GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        76 ~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ......++|++++.||+|+||.||+|++..+++.||||++....      +.+.+|+.+++.++||||+++++++     
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----   93 (331)
T 4aaa_A           19 LYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-----   93 (331)
T ss_dssp             CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             hhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe-----
Confidence            34455668999999999999999999999999999999985322      3456899999999999999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....+|+||||++| +|..++..    ...+++..++.++.||+.||.|||+++
T Consensus        94 ~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~  144 (331)
T 4aaa_A           94 KKKKRWYLVFEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSHN  144 (331)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ecCCEEEEEEecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            555668999999997 67666553    567999999999999999999999998

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.96  E-value=3.1e-29  Score=222.40  Aligned_cols=196  Identities=21%  Similarity=0.297  Sum_probs=138.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++.++||+|+||+||+|+++.+++.||||++....      .....|+..+..+ +||||+++++++     ...
T Consensus        55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~-----~~~  129 (311)
T 3p1a_A           55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW-----EEG  129 (311)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EET
T ss_pred             hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE-----EeC
Confidence            4467999999999999999999999999999999985421      2234555555555 899999999999     556


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hHHhHhhhc-----
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QLVEIIKVL-----  214 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~~~~~~~~-----  214 (335)
                      ..+|+|||||+|+|.+++...   ...+++..++.|+.||+.||.|||+++            ++ .....+..+     
T Consensus       130 ~~~~lv~e~~~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          130 GILYLQTELCGPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVE  206 (311)
T ss_dssp             TEEEEEEECCCCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEE
T ss_pred             CEEEEEEeccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeee
Confidence            669999999998998888763   456999999999999999999999998            00 000001111     


Q ss_pred             -----------CCCCHHHhhhhCCCCCC-----------------CCCC-------CCCCCccccccccCCChHHHHHHH
Q 019844          215 -----------GTPTREEIKCMNPNYTE-----------------FKFP-------QIKPHPWHKVFQKRLPPEAVDLVC  259 (335)
Q Consensus       215 -----------g~~~~~~~~~~~~~~~~-----------------~~~~-------~~~~~~~~~~~~~~~s~~~~~li~  259 (335)
                                 |++.+.........|..                 ...+       ..........++..+++++.+||.
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  286 (311)
T 3p1a_A          207 LGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLV  286 (311)
T ss_dssp             CC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHH
T ss_pred             cccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHH
Confidence                       22211100000000100                 0000       001111122334578999999999


Q ss_pred             HhccCCCCCCCCHHHHhcCccccc
Q 019844          260 RFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       260 ~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      +||+.||++|||+.++|+||||++
T Consensus       287 ~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          287 MMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHcCCChhhCcCHHHHHhCccccC
Confidence            999999999999999999999985

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.5e-29  Score=225.34  Aligned_cols=197  Identities=21%  Similarity=0.271  Sum_probs=142.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|.+++.||+|+||.||+|.++.+++.||+|.+...   ...+.+|+.+++.++||||+++++++     .+...+|+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~l   78 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF-----ESMEELVM   78 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEE-----ecCCEEEE
Confidence            35699999999999999999999999999999998643   24567999999999999999999999     55566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC---hHHhHhhhc-------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD---QLVEIIKVL-------  214 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~---~~~~~~~~~-------  214 (335)
                      |||||+| +|.+++..   ....+++..++.++.||+.||.|||+++            ++   .....+..+       
T Consensus        79 v~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           79 IFEFISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EECCCCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             EEEeCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence            9999996 99988864   1346999999999999999999999998            10   000011111       


Q ss_pred             ---------CCCC---HHHhh---------------------hhCCCCCCCCCCC----C--CCCccccccccCCChHHH
Q 019844          215 ---------GTPT---REEIK---------------------CMNPNYTEFKFPQ----I--KPHPWHKVFQKRLPPEAV  255 (335)
Q Consensus       215 ---------g~~~---~~~~~---------------------~~~~~~~~~~~~~----~--~~~~~~~~~~~~~s~~~~  255 (335)
                               |++.   ++.+.                     .+.+.|.......    +  ....+....+..+++++.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  235 (321)
T 1tki_A          156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM  235 (321)
T ss_dssp             TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred             CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHH
Confidence                     2221   11110                     0011110000000    0  000111112257899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +||.+||+.||.+|||+.|+|+||||++..
T Consensus       236 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          236 DFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence            999999999999999999999999998753

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.96  E-value=5.1e-29  Score=217.94  Aligned_cols=120  Identities=24%  Similarity=0.324  Sum_probs=106.2

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|++.+.||+|+||.||+|.++.+++.||||++...      ...+.+|+.++..+ +||||+++++++     ..
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~-----~~   82 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW-----AE   82 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE-----EE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee-----ec
Confidence            4567899999999999999999999999999999998642      24567899999999 999999999999     44


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++|+||||++| +|.+++.........+++..++.++.||+.||.|||+++
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~  135 (289)
T 1x8b_A           83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS  135 (289)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5568999999986 999999876555578999999999999999999999998

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=1.1e-28  Score=221.98  Aligned_cols=197  Identities=22%  Similarity=0.364  Sum_probs=144.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..+|++++.||+|+||.||+|+++.+++.||+|++.+..       ..+.+|+.+++.+ +|||||+++++|     ...
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeC
Confidence            456999999999999999999999999999999997532       3467899999988 899999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C--------hHH---
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D--------QLV---  208 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~--------~~~---  208 (335)
                      ..+|+|||||+| +|.+++..    .+.+++..++.++.||+.||.|||++++            +        .+.   
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~  158 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK  158 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCB
T ss_pred             CEEEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccc
Confidence            679999999986 99999876    5679999999999999999999999980            0        000   


Q ss_pred             -------hHhhhcCCCC---HHHhh---------------------hhCCCCCCCCCCCCCC-Cc----------ccccc
Q 019844          209 -------EIIKVLGTPT---REEIK---------------------CMNPNYTEFKFPQIKP-HP----------WHKVF  246 (335)
Q Consensus       209 -------~~~~~~g~~~---~~~~~---------------------~~~~~~~~~~~~~~~~-~~----------~~~~~  246 (335)
                             .....+|++.   ++.+.                     .+.+.|.......... ..          ....+
T Consensus       159 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (345)
T 3a8x_A          159 EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI  238 (345)
T ss_dssp             CSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCC
T ss_pred             cccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCC
Confidence                   0011233332   11111                     0111111000000000 00          01124


Q ss_pred             ccCCChHHHHHHHHhccCCCCCCCCH------HHHhcCcccccCCC
Q 019844          247 QKRLPPEAVDLVCRFFQYSPNLRCTA------LEACVHPFFDELRD  286 (335)
Q Consensus       247 ~~~~s~~~~~li~~~L~~dP~~R~t~------~~~L~hp~f~~~~~  286 (335)
                      +..+++++.+||.+||+.||.+||++      .++++||||+.+.+
T Consensus       239 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w  284 (345)
T 3a8x_A          239 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  284 (345)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCH
T ss_pred             CCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCH
Confidence            56789999999999999999999995      89999999998765

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=1.2e-28  Score=215.44  Aligned_cols=202  Identities=23%  Similarity=0.230  Sum_probs=145.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++.+.||+|+||.||+|.++.+++.||+|++....      ..+.+|+.+++.++||||+++++++     ....
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   78 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEES   78 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE-----EcCC
Confidence            3457999999999999999999999999999999986432      4567899999999999999999999     5566


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC--hH--HhHhhhcC-
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD--QL--VEIIKVLG-  215 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~--~~--~~~~~~~g-  215 (335)
                      ..|+||||++| +|.+.+..    ...+++..++.++.||+.||.|||+++            ++  ..  ...+..+| 
T Consensus        79 ~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~  154 (284)
T 3kk8_A           79 FHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL  154 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             EEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeecee
Confidence            68999999996 99888876    567999999999999999999999998            10  00  00111111 


Q ss_pred             ---------------CCC---HHHhhhhCCCCC----------------CCCCCCCC-----------CCccccccccCC
Q 019844          216 ---------------TPT---REEIKCMNPNYT----------------EFKFPQIK-----------PHPWHKVFQKRL  250 (335)
Q Consensus       216 ---------------~~~---~~~~~~~~~~~~----------------~~~~~~~~-----------~~~~~~~~~~~~  250 (335)
                                     ++.   ++.+........                ...+....           ...+....+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T 3kk8_A          155 AIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV  234 (284)
T ss_dssp             CEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             eEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhccc
Confidence                           111   111110000000                00000000           000111112467


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTR  290 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~  290 (335)
                      ++++.+||.+||+.||++|||+.++|+||||+........
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~~~  274 (284)
T 3kk8_A          235 TPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASA  274 (284)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCGGGS
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhHHhH
Confidence            8999999999999999999999999999999987654433

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.96  E-value=5.4e-29  Score=217.26  Aligned_cols=198  Identities=24%  Similarity=0.328  Sum_probs=143.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++.+.||+|+||.||+|.+..++..||+|++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   81 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDA   81 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE-----ecC
Confidence            345799999999999999999999999999999998542       24577899999999999999999999     555


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-H-H---------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-L-V---------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~-~---------  208 (335)
                      ..+++||||++| +|.+++..    ...+++..++.++.||+.||.|||++++            +. . .         
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~  157 (279)
T 3fdn_A           82 TRVYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV  157 (279)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEES
T ss_pred             CEEEEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccc
Confidence            668999999995 99999876    4679999999999999999999999980            00 0 0         


Q ss_pred             -----hHhhhcCCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-------ccccccccCCChHHHHH
Q 019844          209 -----EIIKVLGTPT---REEIKCMNPNYT----------------EFKFPQIKPH-------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       209 -----~~~~~~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~s~~~~~l  257 (335)
                           ......|++.   ++.+........                ...+......       .....++..+++++.+|
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  237 (279)
T 3fdn_A          158 HAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL  237 (279)
T ss_dssp             CC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHH
T ss_pred             cCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence                 0011122222   111110000000                0000000000       00112345688999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+|||+.++|+||||+....
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             HHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            99999999999999999999999988654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=2.8e-29  Score=236.56  Aligned_cols=196  Identities=22%  Similarity=0.322  Sum_probs=141.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++++.||+|+||.||+|+++.++..||||++.+.      ...+.+|+.+++.++|||||+++++|     ....
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~  109 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF-----EDKR  109 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSS
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeCC
Confidence            445799999999999999999999999999999998642      34577999999999999999999999     5566


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-----HHhH-----
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-----LVEI-----  210 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-----~~~~-----  210 (335)
                      .+|+|||||.| +|.+.+..    ...+++..++.|+.||+.||.|||+++            ++.     ..++     
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~  185 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL  185 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence            69999999996 99888876    567999999999999999999999998            100     0000     


Q ss_pred             ----------hhhcCCCCHHHhhhhCCCCCC------------------CCCCCC-----------CCCccccccccCCC
Q 019844          211 ----------IKVLGTPTREEIKCMNPNYTE------------------FKFPQI-----------KPHPWHKVFQKRLP  251 (335)
Q Consensus       211 ----------~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~~~~~~~~s  251 (335)
                                ...+|++.+.........|..                  ..+...           ....+....+..++
T Consensus       186 a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  265 (494)
T 3lij_A          186 SAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVS  265 (494)
T ss_dssp             CEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSC
T ss_pred             CeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCC
Confidence                      011233321111111111110                  000000           00011112235789


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +++++||++||+.||.+|||+.++|+||||+..
T Consensus       266 ~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          266 EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            999999999999999999999999999999875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=1.1e-28  Score=226.85  Aligned_cols=122  Identities=24%  Similarity=0.403  Sum_probs=95.7

Q ss_pred             cceeeeEE-eeeeeccCceEEEEEEEc--CCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           79 KQKVSYIA-EHVVGTGSFGVVFQAKCR--ETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        79 ~~~~~y~~-~~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ...+.|.+ +++||+|+||.||+|+++  .+++.||||++...  ...+.+|+.+|+.++|||||+++++|..   ....
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~   93 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS---HADR   93 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTT
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCC
Confidence            34456887 568999999999999976  57889999999753  3467899999999999999999999964   2345


Q ss_pred             EEEEEeecchhhHHHHHHHHhhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPETVNRIARNYSRI-----HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++|+|.+++......     ...+++..++.|+.||+.||.|||+++
T Consensus        94 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~  148 (405)
T 3rgf_A           94 KVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW  148 (405)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68999999999999888754321     124999999999999999999999988

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=2.7e-29  Score=227.33  Aligned_cols=195  Identities=25%  Similarity=0.262  Sum_probs=143.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|.+.+.||+|+||.||+|.++.+++.||+|++...      ...+.+|+.+++.++|||||++++++     ...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~  100 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEE  100 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeC
Confidence            3456799999999999999999999999999999999643      24567999999999999999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------ChH----HhHhhh--
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQL----VEIIKV--  213 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~~----~~~~~~--  213 (335)
                      .++|+|||||.| +|.+.+..    ...+++..++.++.||+.||.|||++++            +..    ...+..  
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG  176 (362)
T 2bdw_A          101 SFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFG  176 (362)
T ss_dssp             SEEEEEECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CEEEEEEecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecC
Confidence            678999999996 99888865    5679999999999999999999999981            000    001111  


Q ss_pred             --------------cCCCC---HHHhhhhCCCCCC------------------CCCCCCC-----------CCccccccc
Q 019844          214 --------------LGTPT---REEIKCMNPNYTE------------------FKFPQIK-----------PHPWHKVFQ  247 (335)
Q Consensus       214 --------------~g~~~---~~~~~~~~~~~~~------------------~~~~~~~-----------~~~~~~~~~  247 (335)
                                    +|++.   ++.+...  .|..                  ..+....           ...+....+
T Consensus       177 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  254 (362)
T 2bdw_A          177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW  254 (362)
T ss_dssp             TCBCCTTCCSCCCSCSCTTTCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGG
T ss_pred             cceEecCCcccccCCCCccccCHHHHccC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence                          22222   1111100  0100                  0000000           001111122


Q ss_pred             cCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          248 KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ..+++++++||.+||+.||++|||+.++|+||||...
T Consensus       255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          255 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence            4679999999999999999999999999999999753

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.96  E-value=3.3e-29  Score=224.50  Aligned_cols=216  Identities=22%  Similarity=0.309  Sum_probs=152.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+|.+++.||+|+||.||+|.+..+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~  113 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF-----EDN  113 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ecC
Confidence            345799999999999999999999999999999998643       24567899999999999999999999     555


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhh-----
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKV-----  213 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~-----  213 (335)
                      .++|+||||++| +|.+++..    ...+++..++.++.||+.||.|||++++            +. ....+..     
T Consensus       114 ~~~~lv~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          114 DFVFVVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT  189 (335)
T ss_dssp             SEEEEEECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CeEEEEEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCce
Confidence            679999999996 99998876    5679999999999999999999999980            00 0000111     


Q ss_pred             ------------cCCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-------ccccccccCCChHHH
Q 019844          214 ------------LGTPT---REEIKCMNPNYT----------------EFKFPQIKPH-------PWHKVFQKRLPPEAV  255 (335)
Q Consensus       214 ------------~g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~s~~~~  255 (335)
                                  .|++.   ++.+........                ...+......       .....++..+++++.
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (335)
T 2owb_A          190 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAA  269 (335)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHH
T ss_pred             ecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHH
Confidence                        12211   111110000000                0000000000       000123456889999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCC
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFK  304 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~  304 (335)
                      +||.+||+.||++|||+.++|+||||.....|.........+++.+...
T Consensus       270 ~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (335)
T 2owb_A          270 SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIA  318 (335)
T ss_dssp             HHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCSCCCGGGGTSCCCCCSS
T ss_pred             HHHHHHccCChhHCcCHHHHhcCccccCCCccccCCcccccCCCccccC
Confidence            9999999999999999999999999998776654443334444444433

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.96  E-value=1.2e-28  Score=214.99  Aligned_cols=196  Identities=24%  Similarity=0.325  Sum_probs=138.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++.+.||+|+||.||+|.+..+++.||||++....       ..+.+|+.+++.++||||+++++++     ....+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF-----EDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE-----ECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE-----ccCCe
Confidence            46999999999999999999999999999999996431       4577999999999999999999999     55567


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh---------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ---------------  206 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~---------------  206 (335)
                      +|+||||+++ +|.+++...   ...+++..++.++.||+.||.|||+++            ++.               
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence            9999999986 999988752   357999999999999999999999998            000               


Q ss_pred             ---HHhHhhhcCCCCH---HHhh---------------------hhCCCCCCCCCCCCCCC--ccccccccCCChHHHHH
Q 019844          207 ---LVEIIKVLGTPTR---EEIK---------------------CMNPNYTEFKFPQIKPH--PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       207 ---~~~~~~~~g~~~~---~~~~---------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l  257 (335)
                         ........|++.+   +.+.                     .+.+.|...........  ......+..+++++.+|
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  242 (278)
T 3cok_A          163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDL  242 (278)
T ss_dssp             C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHH
T ss_pred             cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHH
Confidence               0000011222211   1000                     01111110000000000  00112345688999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      |.+||+.||++|||+.++|+||||....
T Consensus       243 i~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          243 IHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             HHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             HHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            9999999999999999999999998643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.96  E-value=1.2e-28  Score=226.19  Aligned_cols=197  Identities=25%  Similarity=0.366  Sum_probs=144.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|.++++||+|+||.||+|+++.+++.||+|++.+.       ...+.+|+.+++.++|||||+++++|     .+..
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~  142 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-----QDDR  142 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECC
Confidence            45699999999999999999999999999999999642       24577999999999999999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HH-----------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LV-----------  208 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~-----------  208 (335)
                      ++|+|||||+| +|.+++..     ..+++..++.|+.||+.||.|||+++            ++. ..           
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~  217 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK  217 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence            79999999985 99998864     46999999999999999999999998            000 00           


Q ss_pred             -------hHhhhcCCCC---HHHhhhhCC-C-CCC----------------CCCCCCCCC-----------ccccccc--
Q 019844          209 -------EIIKVLGTPT---REEIKCMNP-N-YTE----------------FKFPQIKPH-----------PWHKVFQ--  247 (335)
Q Consensus       209 -------~~~~~~g~~~---~~~~~~~~~-~-~~~----------------~~~~~~~~~-----------~~~~~~~--  247 (335)
                             .....+|++.   ++.+..... . |..                ...|.....           .....++  
T Consensus       218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  297 (410)
T 3v8s_A          218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD  297 (410)
T ss_dssp             CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTT
T ss_pred             eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCc
Confidence                   0012234433   222211100 0 100                000000000           0001122  


Q ss_pred             cCCChHHHHHHHHhccCCCCC--CCCHHHHhcCcccccCCCC
Q 019844          248 KRLPPEAVDLVCRFFQYSPNL--RCTALEACVHPFFDELRDP  287 (335)
Q Consensus       248 ~~~s~~~~~li~~~L~~dP~~--R~t~~~~L~hp~f~~~~~~  287 (335)
                      ..+++++++||++||+.+|.+  |+++.|+++||||+.+.+.
T Consensus       298 ~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~  339 (410)
T 3v8s_A          298 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA  339 (410)
T ss_dssp             CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCC
T ss_pred             ccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHH
Confidence            368999999999999999988  9999999999999998653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=5.4e-29  Score=222.37  Aligned_cols=198  Identities=23%  Similarity=0.252  Sum_probs=139.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc--------chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD--------KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ..++|++.+.||+|+||.||+|++.   .+++.||+|++.+.        ...+.+|+.+|+.++||||+++++++    
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----   90 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF----   90 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE----
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE----
Confidence            3457999999999999999999985   68999999998643        23466899999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHh-----
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVE-----  209 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~-----  209 (335)
                       ....++|+|||||+| +|.+++..    .+.+++..++.++.||+.||.|||++|+            +. ...     
T Consensus        91 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Df  165 (327)
T 3a62_A           91 -QTGGKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF  165 (327)
T ss_dssp             -ECSSCEEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCC
T ss_pred             -EcCCEEEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeC
Confidence             445569999999985 99999876    5679999999999999999999999980            00 000     


Q ss_pred             ------------HhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCCCC-c------cccccccCCC
Q 019844          210 ------------IIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIKPH-P------WHKVFQKRLP  251 (335)
Q Consensus       210 ------------~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~~~-~------~~~~~~~~~s  251 (335)
                                  ....+|++.+....... ..+..                  ..+...... .      ....++..++
T Consensus       166 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~  245 (327)
T 3a62_A          166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLT  245 (327)
T ss_dssp             SCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSC
T ss_pred             CcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCC
Confidence                        01122333211111000 00000                  000000000 0      0112446789


Q ss_pred             hHHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      +++.+||.+||+.||.+||     ++.++|+||||+.+.+
T Consensus       246 ~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          246 QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence            9999999999999999999     8999999999998754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=7.3e-29  Score=233.14  Aligned_cols=199  Identities=24%  Similarity=0.356  Sum_probs=146.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|++.+.||+|+||.||+|.++.+++.||||++.+.       ...+.+|+.+++.++|||||++++++     ..
T Consensus        23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~   97 (484)
T 3nyv_A           23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----ED   97 (484)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----EC
T ss_pred             cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----Ee
Confidence            4556899999999999999999999999999999998532       24578999999999999999999999     56


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC---h---------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD---Q---------  206 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~---~---------  206 (335)
                      ..++|+|||||.| +|.+.+..    .+.+++..++.|+.||+.||.|||+++            ++   .         
T Consensus        98 ~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  173 (484)
T 3nyv_A           98 KGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDF  173 (484)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCT
T ss_pred             CCEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEee
Confidence            6679999999986 99888875    677999999999999999999999998            10   0         


Q ss_pred             -HH-------hHhhhcCCCC---HHHhhh--------------------hCCCCCCCCCC----CC--CCCccccccccC
Q 019844          207 -LV-------EIIKVLGTPT---REEIKC--------------------MNPNYTEFKFP----QI--KPHPWHKVFQKR  249 (335)
Q Consensus       207 -~~-------~~~~~~g~~~---~~~~~~--------------------~~~~~~~~~~~----~~--~~~~~~~~~~~~  249 (335)
                       +.       .....+|++.   |+.+..                    +.+.|......    .+  ....+....+..
T Consensus       174 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  253 (484)
T 3nyv_A          174 GLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK  253 (484)
T ss_dssp             THHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGG
T ss_pred             eeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCccccc
Confidence             00       0011123222   221110                    01111100000    00  000111122356


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +++++++||++||+.||.+|||+.++|+||||+....
T Consensus       254 ~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~  290 (484)
T 3nyv_A          254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK  290 (484)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc
Confidence            8999999999999999999999999999999998654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=2.7e-29  Score=233.74  Aligned_cols=196  Identities=24%  Similarity=0.313  Sum_probs=138.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~-----~~~  220 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTH  220 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE-----EET
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE-----eeC
Confidence            345799999999999999999999999999999999642       23456899999999999999999999     555


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CCc-Ch-----------------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CIV-DQ-----------------------  206 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~~-~~-----------------------  206 (335)
                      ..+|||||||+| +|.+++..    .+.+++..++.|+.||+.||+|||+ +++ +.                       
T Consensus       221 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a  296 (446)
T 4ejn_A          221 DRLCFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC  296 (446)
T ss_dssp             TEEEEEECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCC
T ss_pred             CEEEEEEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCc
Confidence            569999999996 99988876    5679999999999999999999998 760 00                       


Q ss_pred             ------HHhHhhhcCCCC---HHHhhhhCCCCCC------------------CCCCCCCCC-------ccccccccCCCh
Q 019844          207 ------LVEIIKVLGTPT---REEIKCMNPNYTE------------------FKFPQIKPH-------PWHKVFQKRLPP  252 (335)
Q Consensus       207 ------~~~~~~~~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~  252 (335)
                            .......+|++.   ++.+..  ..|..                  ..+......       .....++..+++
T Consensus       297 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~  374 (446)
T 4ejn_A          297 KEGIKDGATMKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP  374 (446)
T ss_dssp             CTTCC-----CCSSSCGGGCCHHHHHT--SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCH
T ss_pred             eeccCCCcccccccCCccccCHhhcCC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCH
Confidence                  000111223322   111111  01110                  000000000       001124567899


Q ss_pred             HHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          253 EAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      ++.+||.+||+.||.+||     ++.++|+||||+.+.+
T Consensus       375 ~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~  413 (446)
T 4ejn_A          375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW  413 (446)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCH
Confidence            999999999999999999     9999999999998755

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=1.6e-29  Score=222.78  Aligned_cols=117  Identities=26%  Similarity=0.372  Sum_probs=98.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------------------------hhHHHHHHH
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------------------------RYKNRELQI  128 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------------------------~~~~~Ei~~  128 (335)
                      ...++|++.+.||+|+||.||+|+++.+++.||||++.+..                              ..+.+|+.+
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~   89 (298)
T 2zv2_A           10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI   89 (298)
T ss_dssp             CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred             eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence            34567999999999999999999999999999999986431                              346789999


Q ss_pred             HHhCCCCceeeeceeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          129 MQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       129 l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+.++||||+++++++..   ....++|+||||+++ +|.+++.     ...+++..++.++.||+.||.|||+++
T Consensus        90 l~~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~  157 (298)
T 2zv2_A           90 LKKLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQK  157 (298)
T ss_dssp             HHTCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHhCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999999999843   235568999999996 8876543     467999999999999999999999998

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.96  E-value=4.5e-28  Score=213.68  Aligned_cols=202  Identities=18%  Similarity=0.197  Sum_probs=143.9

Q ss_pred             cceeeeEEe-eeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHH-HhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAE-HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIM-QMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l-~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...++|.+. +.||+|+||.||+|.++.+++.||+|++.. .....+|+.++ +.++||||+++++++.... ....++|
T Consensus        14 ~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~   91 (299)
T 3m2w_A           14 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLL   91 (299)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEE
T ss_pred             ccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-cHHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCceEE
Confidence            344568877 789999999999999999999999999965 45677899988 6669999999999984311 2366789


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC----hHHhHhhhcCCCC-
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD----QLVEIIKVLGTPT-  218 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~----~~~~~~~~~g~~~-  218 (335)
                      +||||++| +|.+++....  ...+++..++.++.||+.||.|||+++            ++    .....+..+|... 
T Consensus        92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence            99999986 9999998732  346999999999999999999999998            11    0001111122211 


Q ss_pred             -------------------HHHhhhhCCCCCCCC--------CCCCC--CCccccccccCCChHHHHHHHHhccCCCCCC
Q 019844          219 -------------------REEIKCMNPNYTEFK--------FPQIK--PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR  269 (335)
Q Consensus       219 -------------------~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  269 (335)
                                         ++.+ .+.+.|....        .....  ...+....+..+++++.+||.+||+.||.+|
T Consensus       170 ~~~~~~~~~~DiwslG~il~el~-tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  248 (299)
T 3m2w_A          170 TTGEKYDKSCDMWSLGVIMYILL-CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR  248 (299)
T ss_dssp             CTTCGGGGHHHHHHHHHHHHHHH-HSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             cccccCCchhhHHHHHHHHHHHH-HCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhC
Confidence                               1111 1222221110        00000  1111112225689999999999999999999


Q ss_pred             CCHHHHhcCcccccCC
Q 019844          270 CTALEACVHPFFDELR  285 (335)
Q Consensus       270 ~t~~~~L~hp~f~~~~  285 (335)
                      ||+.++|+||||.+..
T Consensus       249 ps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          249 MTITEFMNHPWIMQST  264 (299)
T ss_dssp             CCHHHHHTSHHHHTGG
T ss_pred             CCHHHHhcChhhcccc
Confidence            9999999999998764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.96  E-value=1.7e-28  Score=221.06  Aligned_cols=195  Identities=24%  Similarity=0.286  Sum_probs=137.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..++|.+.+.||+|+||.||+|+++.+++.||||++...  .+.+.+|+.+++.++||||+++++++     .....+|+
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~l  125 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIF-----ETPTEISL  125 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEE-----ECSSEEEE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeE-----ecCCeEEE
Confidence            445699999999999999999999999999999999753  35577899999999999999999999     45556899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC----hHHhHhh--------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD----QLVEIIK--------  212 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~----~~~~~~~--------  212 (335)
                      ||||++| +|.+++..    .+.+++..++.++.||+.||.|||+++            +.    .....+.        
T Consensus       126 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          126 VLELVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             EECCCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             EEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            9999985 99988875    567999999999999999999999988            10    0000011        


Q ss_pred             --------hcCCCC---HHHhhhhCCCCCC------------------CCCCCCCC------------CccccccccCCC
Q 019844          213 --------VLGTPT---REEIKCMNPNYTE------------------FKFPQIKP------------HPWHKVFQKRLP  251 (335)
Q Consensus       213 --------~~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~------------~~~~~~~~~~~s  251 (335)
                              ..|++.   ++.+...  .|..                  ..+.....            ..+....+..++
T Consensus       202 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  279 (349)
T 2w4o_A          202 EHQVLMKTVCGTPGYCAPEILRGC--AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS  279 (349)
T ss_dssp             -----------CGGGSCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred             CcccccccccCCCCccCHHHhcCC--CCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence                    112221   1111100  0100                  00000000            001112235688


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +++.+||.+||+.||++|||+.++|+||||....
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999999999999999998653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=3e-29  Score=226.07  Aligned_cols=198  Identities=21%  Similarity=0.278  Sum_probs=144.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|++++.||+|+||.||+|+++.+++.||||++.+.       ...+.+|..++..+ +||||++++++|     ..
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----EC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----Ec
Confidence            345699999999999999999999999999999999643       24467899999988 799999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HH---------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LV---------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~---------  208 (335)
                      ..++|+|||||+| +|.+++..    .+.+++..++.|+.||+.||.|||++|+            +. ..         
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a  168 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC  168 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcc
Confidence            6679999999986 99999986    5679999999999999999999999980            00 00         


Q ss_pred             --------hHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCCCC-------ccccccccCCChHH
Q 019844          209 --------EIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIKPH-------PWHKVFQKRLPPEA  254 (335)
Q Consensus       209 --------~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~~~  254 (335)
                              .....+|++.+....... ..|..                  ..+......       .....++..+++++
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  248 (353)
T 2i0e_A          169 KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEA  248 (353)
T ss_dssp             BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             cccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHH
Confidence                    001122333211111000 00100                  000000000       00112456789999


Q ss_pred             HHHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          255 VDLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      .+||.+||+.||.+||+     +.++++||||+.+.+
T Consensus       249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          249 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             HHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence            99999999999999994     699999999998765

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=5.7e-28  Score=223.50  Aligned_cols=118  Identities=23%  Similarity=0.346  Sum_probs=102.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhC------CCCceeeeceeeeeCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQML------DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l------~hpnIv~~~~~~~~~~~  149 (335)
                      ....+|++++.||+|+||.||+|.+..+++.||||++....   ..+.+|+.+++.+      +|+||+++++++     
T Consensus        94 ~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~-----  168 (429)
T 3kvw_A           94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF-----  168 (429)
T ss_dssp             EETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE-----
T ss_pred             cccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec-----
Confidence            34457999999999999999999999999999999997543   4566888888887      577999999999     


Q ss_pred             CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....++|+||||++++|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus       169 ~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~  220 (429)
T 3kvw_A          169 TFRNHICMTFELLSMNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKNR  220 (429)
T ss_dssp             EETTEEEEEECCCCCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCeEEEEEeccCCCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5556699999999999999988643  345999999999999999999999988

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.96  E-value=1.5e-28  Score=219.38  Aligned_cols=114  Identities=18%  Similarity=0.336  Sum_probs=102.1

Q ss_pred             eeeeEEe---eeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAE---HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~---~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..+|.+.   +.||+|+||.||+|.++.+++.||||++.+.. ....+|+.+++.+. ||||+++++++     .+..++
T Consensus         7 ~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~~~~   81 (325)
T 3kn6_A            7 YQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVF-----HDQLHT   81 (325)
T ss_dssp             HHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSSEE
T ss_pred             hhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcCCEE
Confidence            3467775   78999999999999999999999999997543 56779999999996 99999999999     556679


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||+| +|.+++..    .+.+++..++.|+.||+.||.|||+++
T Consensus        82 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~  126 (325)
T 3kn6_A           82 FLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDVG  126 (325)
T ss_dssp             EEEECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999986 99999986    678999999999999999999999998

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=9.3e-29  Score=230.84  Aligned_cols=197  Identities=22%  Similarity=0.304  Sum_probs=143.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|.+++.||+|+||.||+|++..+|+.||||++.+.       ...+.+|+.+|+.++||||+++++++     ..
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~-----~~   87 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI-----ST   87 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE-----EC
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EE
Confidence            3455799999999999999999999999999999999643       23577999999999999999999999     45


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHh-------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVE-------  209 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~-------  209 (335)
                      ...+|+|||||+| +|.+++..    .+.+++..++.++.||+.||.|||+++            ++.  ..+       
T Consensus        88 ~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a  163 (476)
T 2y94_A           88 PSDIFMVMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS  163 (476)
T ss_dssp             SSEEEEEEECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccch
Confidence            5569999999985 99998875    567999999999999999999999998            000  000       


Q ss_pred             --------HhhhcCCCCHHHhhhhCC-CCCC-------------------CCCCCCCCC-cc------ccccccCCChHH
Q 019844          210 --------IIKVLGTPTREEIKCMNP-NYTE-------------------FKFPQIKPH-PW------HKVFQKRLPPEA  254 (335)
Q Consensus       210 --------~~~~~g~~~~~~~~~~~~-~~~~-------------------~~~~~~~~~-~~------~~~~~~~~s~~~  254 (335)
                              ....+|++.+........ .|..                   ..+...... .+      ....+..+++++
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  243 (476)
T 2y94_A          164 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSV  243 (476)
T ss_dssp             EECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHH
T ss_pred             hhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHH
Confidence                    011123332111110000 0000                   000000000 00      012345689999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      .+||.+||+.||.+|||+.++++||||+..
T Consensus       244 ~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          244 ISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            999999999999999999999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.96  E-value=1.7e-27  Score=212.37  Aligned_cols=123  Identities=26%  Similarity=0.422  Sum_probs=103.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-CCCcEEEEEEeccc------chhHHHHHHHHHhC---CCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-ETGEIVAIKKVLQD------KRYKNRELQIMQML---DHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~  148 (335)
                      ....+|++.+.||+|+||.||+|.+. .+++.||+|++...      ...+.+|+.+++.+   +||||+++++++....
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            34467999999999999999999995 67899999998632      23566888888777   8999999999985433


Q ss_pred             CCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ......+++||||++|+|.+++....  ...+++..++.++.||+.||.|||++|
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g  140 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR  140 (326)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCceEEEEEecCCCCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            33567799999999999999988633  345999999999999999999999998

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.96  E-value=1.8e-28  Score=218.45  Aligned_cols=196  Identities=19%  Similarity=0.242  Sum_probs=144.2

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ...++|++++.||+|+||.||+|.++.+|+.||+|++...          ...+.+|+.+++.++||||+++++++    
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----   84 (321)
T 2a2a_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY----   84 (321)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE----
Confidence            4456799999999999999999999999999999999642          23477999999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChHH-----hH
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQLV-----EI  210 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~~-----~~  210 (335)
                       .....+|+||||++| +|.+++..    ...+++..++.++.||+.||.|||+++            +....     ..
T Consensus        85 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~k  159 (321)
T 2a2a_A           85 -ENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIK  159 (321)
T ss_dssp             -ECSSEEEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEE
T ss_pred             -ecCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEE
Confidence             555669999999985 99999875    567999999999999999999999998            10000     01


Q ss_pred             hhhcC----------------CCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCcc
Q 019844          211 IKVLG----------------TPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPW  242 (335)
Q Consensus       211 ~~~~g----------------~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~  242 (335)
                      +..+|                ++.   ++.+...  .+..                  ..+...           ....+
T Consensus       160 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  237 (321)
T 2a2a_A          160 LIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF  237 (321)
T ss_dssp             ECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC
T ss_pred             EccCccceecCccccccccCCCCCccCcccccCC--CCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccccc
Confidence            11111                111   1111100  0000                  000000           00011


Q ss_pred             ccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          243 HKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ...++..+++.+.+||.+||+.||++|||+.++|+||||....
T Consensus       238 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          238 DEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             ChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            1222356889999999999999999999999999999998654

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.96  E-value=1e-27  Score=210.33  Aligned_cols=198  Identities=22%  Similarity=0.301  Sum_probs=141.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...|.+.+.||+|+||.||+|.+..++..||+|++...      ...+.+|+.+++.++||||+++++++.... ....+
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~  103 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKC  103 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCce
Confidence            34599999999999999999999999999999998642      245678999999999999999999985433 34567


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--cCh-HH-------------hHhhh----
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--VDQ-LV-------------EIIKV----  213 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--~~~-~~-------------~~~~~----  213 (335)
                      +|+||||++| +|.+++..    ...+++..++.|+.||+.||.|||+++  +-. ..             ..+..    
T Consensus       104 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             EEEEEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence            8999999986 99999976    567999999999999999999999986  110 00             00001    


Q ss_pred             -----------cCCCCHHHhhhhCCCCCC------------------CCCCCC----------CCCccccccccCCChHH
Q 019844          214 -----------LGTPTREEIKCMNPNYTE------------------FKFPQI----------KPHPWHKVFQKRLPPEA  254 (335)
Q Consensus       214 -----------~g~~~~~~~~~~~~~~~~------------------~~~~~~----------~~~~~~~~~~~~~s~~~  254 (335)
                                 .|++.+.........+..                  ..+...          ........++...++++
T Consensus       180 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  259 (290)
T 1t4h_A          180 TLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV  259 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHH
T ss_pred             ccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHH
Confidence                       122211000000000000                  000000          00111123345678899


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      .+||.+||+.||.+|||+.++|+||||++
T Consensus       260 ~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          260 KEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            99999999999999999999999999986

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.96  E-value=2.5e-29  Score=224.46  Aligned_cols=123  Identities=21%  Similarity=0.308  Sum_probs=101.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCC-----
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-----  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-----  149 (335)
                      ..++|++++.||+|+||.||+|+++.+++.||||++...     ...+.+|+.+|+.++|||||+++++|.....     
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            456799999999999999999999999999999998632     2457899999999999999999999865432     


Q ss_pred             -----------------------------------------------CCccEEEEEeecchh-hHHHHHHHHhhhcCCCC
Q 019844          150 -----------------------------------------------KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMP  181 (335)
Q Consensus       150 -----------------------------------------------~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~  181 (335)
                                                                     ....++|+|||||+| +|.+++..... ....+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~  162 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDRE  162 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSC
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchh
Confidence                                                           123458999999996 99999986332 23356


Q ss_pred             HHHHHHHHHHHHHHHHHHHhCC
Q 019844          182 LIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       182 ~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +..++.++.||+.||.|||+++
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~  184 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKG  184 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHHHHHhCC
Confidence            6778999999999999999998

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=3.5e-28  Score=214.75  Aligned_cols=196  Identities=22%  Similarity=0.349  Sum_probs=143.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..++|.+.+.||+|+||.||+|+++.+|+.||+|++...    ...+.+|+.+++.++||||+++++++     .....+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   81 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY-----ESTTHY   81 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE-----ECSSEE
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc-----ccCCEE
Confidence            446799999999999999999999999999999999643    24577999999999999999999999     555668


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC---------------h-HHhHhhhcCCCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD---------------Q-LVEIIKVLGTPT  218 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~---------------~-~~~~~~~~g~~~  218 (335)
                      |+||||++| +|.+++..    .+.+++..++.++.||+.||.|||++++-               . ....+..+|...
T Consensus        82 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A           82 YLVMQLVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             EEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             EEEEEcCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            999999986 99998876    56799999999999999999999999810               0 000111122111


Q ss_pred             -----HHHhhhhCCCCCCCCCCCC---------------------------C-------------CCccccccccCCChH
Q 019844          219 -----REEIKCMNPNYTEFKFPQI---------------------------K-------------PHPWHKVFQKRLPPE  253 (335)
Q Consensus       219 -----~~~~~~~~~~~~~~~~~~~---------------------------~-------------~~~~~~~~~~~~s~~  253 (335)
                           ......+.+.|.+.+....                           .             ...+...++..++++
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  237 (304)
T 2jam_A          158 MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES  237 (304)
T ss_dssp             CCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHH
T ss_pred             ecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHH
Confidence                 0001112222222111000                           0             001111233567899


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +.+||.+||+.||++|||+.++|+||||...
T Consensus       238 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          238 AKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=1.9e-28  Score=214.80  Aligned_cols=200  Identities=21%  Similarity=0.267  Sum_probs=138.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++++.||+|+||.||+|.+..+++.||+|++....      ....++...++.++||||+++++++.     ...
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~   79 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REG   79 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccC
Confidence            3457999999999999999999999999999999996432      22334555578889999999999994     444


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-Cc------------Ch--------H-----
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-IV------------DQ--------L-----  207 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~~------------~~--------~-----  207 (335)
                      .+|+||||++|+|.+++.........+++..++.++.||+.||.|||++ ++            +.        +     
T Consensus        80 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A           80 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGY  159 (290)
T ss_dssp             SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred             CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence            5899999999999888887655567899999999999999999999997 70            00        0     


Q ss_pred             ----HhHhhhcCCCC---HHHhhh--hCCCCC------------------CCCCCCCCC----------CccccccccCC
Q 019844          208 ----VEIIKVLGTPT---REEIKC--MNPNYT------------------EFKFPQIKP----------HPWHKVFQKRL  250 (335)
Q Consensus       208 ----~~~~~~~g~~~---~~~~~~--~~~~~~------------------~~~~~~~~~----------~~~~~~~~~~~  250 (335)
                          .......|++.   ++.+..  ....+.                  ...+.....          .......+..+
T Consensus       160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (290)
T 3fme_A          160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF  239 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTS
T ss_pred             ccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccC
Confidence                00001123322   221100  000000                  000000000          00001112467


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ++++.+||.+||+.||++|||+.++|+||||+..
T Consensus       240 ~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          240 SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            8999999999999999999999999999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.96  E-value=1.4e-28  Score=214.95  Aligned_cols=197  Identities=20%  Similarity=0.287  Sum_probs=144.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|++++.||+|+||.||+|.++.+++.||+|++...          ...+.+|+.+++.++||||+++++++     .
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~   78 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF-----E   78 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee-----c
Confidence            45799999999999999999999999999999998642          24578999999999999999999999     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH-----HhHhh
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL-----VEIIK  212 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~-----~~~~~  212 (335)
                      ....+|+||||++| +|.+++..    ...+++..++.++.||+.||.|||+++            ++..     ...+.
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~  154 (283)
T 3bhy_A           79 NKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI  154 (283)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC
T ss_pred             CCCeEEEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE
Confidence            55568999999985 99999976    567999999999999999999999988            0000     00111


Q ss_pred             hc----------------CCCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCcccc
Q 019844          213 VL----------------GTPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPWHK  244 (335)
Q Consensus       213 ~~----------------g~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~~  244 (335)
                      .+                |++.   ++.+...  .+..                  ..+...           ....+..
T Consensus       155 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  232 (283)
T 3bhy_A          155 DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE  232 (283)
T ss_dssp             CCTTCEECC--------CCCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCH
T ss_pred             ecccceeccCCCcccccCCCcCccCcceecCC--CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcc
Confidence            11                2211   1111100  0000                  000000           0001111


Q ss_pred             ccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          245 VFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      ..+..+++.+.+||.+||+.||++|||+.++|+||||+.++...
T Consensus       233 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~~  276 (283)
T 3bhy_A          233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN  276 (283)
T ss_dssp             HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHCC
T ss_pred             hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHHh
Confidence            22356789999999999999999999999999999999876543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.96  E-value=3.1e-28  Score=216.16  Aligned_cols=116  Identities=20%  Similarity=0.261  Sum_probs=101.9

Q ss_pred             cceeeeEEe-eeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAE-HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...++|.+. +.||+|+||.||+|.++.+++.||||++...    ...+.+|+.+++++ +||||+++++++     ...
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~-----~~~   83 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF-----EEE   83 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeC
Confidence            345679985 7899999999999999999999999999643    24577999999985 799999999999     455


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|+|||||+| +|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNKG  131 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            569999999995 99999986    567999999999999999999999998

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=7.9e-29  Score=224.86  Aligned_cols=196  Identities=21%  Similarity=0.296  Sum_probs=138.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHH-HHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQI-MQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~-l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..++|++++.||+|+||.||+|+++.+++.||||++.+..       ..+.+|..+ ++.++|||||+++++|     ..
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~~  110 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QT  110 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----EC
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----Ee
Confidence            3457999999999999999999999999999999996532       334566666 5678999999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--HH--------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--LV--------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--~~--------  208 (335)
                      ..++|+|||||+| +|.+++..    .+.+++..++.|+.||+.||+|||++|+            +.  ..        
T Consensus       111 ~~~~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a  186 (373)
T 2r5t_A          111 ADKLYFVLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC  186 (373)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccc
Confidence            6679999999996 99999886    5679999999999999999999999980            00  00        


Q ss_pred             --------hHhhhcCCCCH---HHhhhhCCCCCC------------------CCCCCCCCC-c------cccccccCCCh
Q 019844          209 --------EIIKVLGTPTR---EEIKCMNPNYTE------------------FKFPQIKPH-P------WHKVFQKRLPP  252 (335)
Q Consensus       209 --------~~~~~~g~~~~---~~~~~~~~~~~~------------------~~~~~~~~~-~------~~~~~~~~~s~  252 (335)
                              .....+|++.+   +.+...  .|..                  ..+...... .      ....++..+++
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  264 (373)
T 2r5t_A          187 KENIEHNSTTSTFCGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITN  264 (373)
T ss_dssp             GGGBCCCCCCCSBSCCCCCCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCH
T ss_pred             cccccCCCccccccCCccccCHHHhCCC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Confidence                    01122344331   211100  0100                  000000000 0      01124567899


Q ss_pred             HHHHHHHHhccCCCCCCCCH----HHHhcCcccccCCC
Q 019844          253 EAVDLVCRFFQYSPNLRCTA----LEACVHPFFDELRD  286 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~----~~~L~hp~f~~~~~  286 (335)
                      ++++||.+||+.||.+|+++    .++++||||+.+.+
T Consensus       265 ~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w  302 (373)
T 2r5t_A          265 SARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW  302 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCH
Confidence            99999999999999999986    69999999998765

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.96  E-value=2.1e-28  Score=213.17  Aligned_cols=115  Identities=26%  Similarity=0.300  Sum_probs=103.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..++|++.+.||+|+||.||+|.++.++..+|+|++.+.    ...+.+|+.+++.++||||+++++++     .....+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   81 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF-----EDNTDI   81 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCeE
Confidence            456799999999999999999999999999999998642    35678999999999999999999999     555668


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        82 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (277)
T 3f3z_A           82 YLVMELCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKLN  126 (277)
T ss_dssp             EEEEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999986 99998876    567999999999999999999999998

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.96  E-value=2.7e-28  Score=218.58  Aligned_cols=196  Identities=20%  Similarity=0.259  Sum_probs=142.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhCCCCceeeeceeeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQMLDHPNIVALKHCFFS  146 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l~hpnIv~~~~~~~~  146 (335)
                      ...++|++++.||+|+||.||+|+++.+++.||||++.+..            ..+.+|+.+++.++||||++++++|  
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~--   98 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF--   98 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE--
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE--
Confidence            34567999999999999999999999999999999996432            3466899999999999999999999  


Q ss_pred             CCCCCccEEEEEeecch-h-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHh
Q 019844          147 TTDKEELYLNLVLEYVP-E-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEII  211 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~-g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~  211 (335)
                         ....++++||||+. | +|.+++..    ...+++..++.|+.||+.||.|||++++            + .....+
T Consensus        99 ---~~~~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL  171 (335)
T 3dls_A           99 ---ENQGFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKL  171 (335)
T ss_dssp             ---ECSSEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEE
T ss_pred             ---eeCCEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEE
Confidence               55667999999986 5 99998876    6679999999999999999999999980            0 000000


Q ss_pred             ----------------hhcCCCC---HHHhhhhCCCCC------------------CCCCCCCCC-CccccccccCCChH
Q 019844          212 ----------------KVLGTPT---REEIKCMNPNYT------------------EFKFPQIKP-HPWHKVFQKRLPPE  253 (335)
Q Consensus       212 ----------------~~~g~~~---~~~~~~~~~~~~------------------~~~~~~~~~-~~~~~~~~~~~s~~  253 (335)
                                      ..+|++.   ++.+... +.+.                  ...+..... .......+..++++
T Consensus       172 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  250 (335)
T 3dls_A          172 IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGN-PYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKE  250 (335)
T ss_dssp             CCCTTCEECCTTCCBCEECSCGGGCCHHHHTTC-CBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCCHH
T ss_pred             eecccceECCCCCceeccCCCccccChhhhcCC-CCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccCHH
Confidence                            1112222   1111100 0000                  000000000 00011223457999


Q ss_pred             HHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          254 AVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       254 ~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +.+||.+||+.||.+|||+.++|+||||++.
T Consensus       251 l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.96  E-value=1.8e-28  Score=223.61  Aligned_cols=198  Identities=22%  Similarity=0.304  Sum_probs=142.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|++++.||+|+||.||+|.++.+++.||+|++...    ...+.+|+.+|+.++||||+++++++     .....+|
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~~  124 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMV  124 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEEE
Confidence            45699999999999999999999999999999999643    34577999999999999999999999     5556699


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC---hHHhHhhhc------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD---QLVEIIKVL------  214 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~---~~~~~~~~~------  214 (335)
                      +|||||.| +|.+++..   ....+++..++.++.||+.||.|||+++            ++   .....+..+      
T Consensus       125 lv~E~~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          125 LILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  201 (387)
T ss_dssp             EEEECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEcCCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence            99999986 99888764   1346999999999999999999999998            10   000011111      


Q ss_pred             ----------CCCC---HHHhhh---------------------hCCCCCCCCC----CCCC--CCccccccccCCChHH
Q 019844          215 ----------GTPT---REEIKC---------------------MNPNYTEFKF----PQIK--PHPWHKVFQKRLPPEA  254 (335)
Q Consensus       215 ----------g~~~---~~~~~~---------------------~~~~~~~~~~----~~~~--~~~~~~~~~~~~s~~~  254 (335)
                                |++.   ++.+..                     +.+.|.....    ..+.  ...+....+..+++++
T Consensus       202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  281 (387)
T 1kob_A          202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA  281 (387)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred             CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHH
Confidence                      2221   111110                     0111100000    0000  0001111224689999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      .+||.+||+.||.+|||+.++|+||||+....
T Consensus       282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             HHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence            99999999999999999999999999987543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.96  E-value=4.7e-28  Score=218.35  Aligned_cols=120  Identities=29%  Similarity=0.427  Sum_probs=101.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC---CC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD---KE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~---~~  151 (335)
                      ..+|++++.||+|+||.||+|+++.+|+.||||++...      ...+.+|+.+++.++||||+++++++.....   ..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            45799999999999999999999999999999998532      2356799999999999999999999865321   12


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|+|||||+|+|.+.+...   ...+++..++.|+.||+.||.|||++|
T Consensus        96 ~~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (351)
T 3mi9_A           96 KGSIYLVFDFCEHDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNK  144 (351)
T ss_dssp             -CEEEEEEECCSEEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEeccCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            4568999999999888777642   356999999999999999999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=2.8e-28  Score=224.94  Aligned_cols=195  Identities=26%  Similarity=0.384  Sum_probs=139.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhCCCCceeeeceeeeeC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQMLDHPNIVALKHCFFST  147 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~  147 (335)
                      ..++|.+.+.||+|+||.||+|.++.+++.||||++.+..            ..+.+|+.+|+.++|||||++++++   
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~---  209 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---  209 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE---
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence            4568999999999999999999999999999999986431            2467999999999999999999997   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---------------Ch-HHhH
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV---------------DQ-LVEI  210 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~---------------~~-~~~~  210 (335)
                        ... .+|+|||||+| +|.+++..    .+.+++..++.++.||+.||.|||++++               +. ....
T Consensus       210 --~~~-~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~k  282 (419)
T 3i6u_A          210 --DAE-DYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK  282 (419)
T ss_dssp             --ESS-EEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEE
T ss_pred             --ecC-ceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEE
Confidence              222 26799999986 99887764    5679999999999999999999999981               00 0001


Q ss_pred             hhhcCCCC------HHHhhhhCCCCCCCCC--------------------------------CCCCC------------C
Q 019844          211 IKVLGTPT------REEIKCMNPNYTEFKF--------------------------------PQIKP------------H  240 (335)
Q Consensus       211 ~~~~g~~~------~~~~~~~~~~~~~~~~--------------------------------~~~~~------------~  240 (335)
                      +..+|...      .....++.+.|.+.+.                                .....            .
T Consensus       283 l~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~  362 (419)
T 3i6u_A          283 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKY  362 (419)
T ss_dssp             ECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCC
T ss_pred             EeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCC
Confidence            11111110      0000111122221111                                00000            0


Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          241 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      .+....+..+++++.+||.+||+.||.+|||+.++|+||||++.
T Consensus       363 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          363 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            01111224689999999999999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=2.4e-28  Score=212.70  Aligned_cols=197  Identities=23%  Similarity=0.325  Sum_probs=140.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|.+++.||+|+||.||+|.+..+++.||||++...       ...+.+|+.+++.++||||+++++++     ..
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~   82 (276)
T 2h6d_A            8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI-----ST   82 (276)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----EC
T ss_pred             ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE-----ec
Confidence            3445799999999999999999999999999999998642       23567999999999999999999999     44


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------ChH-HhHhhhcCCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQL-VEIIKVLGTP  217 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~~-~~~~~~~g~~  217 (335)
                      ...+|+||||++| +|.+++..    ...+++..++.++.||+.||.|||++++            +.. ...+..+|..
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~  158 (276)
T 2h6d_A           83 PTDFFMVMEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS  158 (276)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred             CCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccc
Confidence            5568999999986 99999986    5679999999999999999999999881            000 0000001100


Q ss_pred             C------HHHhhhhCCCCCCCCCCC------C----------------CCCccc---------------cccccCCChHH
Q 019844          218 T------REEIKCMNPNYTEFKFPQ------I----------------KPHPWH---------------KVFQKRLPPEA  254 (335)
Q Consensus       218 ~------~~~~~~~~~~~~~~~~~~------~----------------~~~~~~---------------~~~~~~~s~~~  254 (335)
                      .      ......+.+.|.+.....      .                ...+|.               ..++..+++++
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l  238 (276)
T 2h6d_A          159 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSV  238 (276)
T ss_dssp             GCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             cccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHH
Confidence            0      000001111111110000      0                000000               11345678999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      .+||.+||+.||.+|||+.++++||||++.
T Consensus       239 ~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          239 ATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence            999999999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=225.32  Aligned_cols=200  Identities=25%  Similarity=0.378  Sum_probs=144.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||.||+|+++.+|+.||||++.+.       ...+.+|+.++..++||||++++++|     .+..
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-----~~~~  134 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF-----QDEN  134 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE-----ECSS
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE-----eeCC
Confidence            35699999999999999999999999999999999642       24467899999999999999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HH----------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LV----------  208 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~----------  208 (335)
                      ++|+|||||+| +|.+++...   ...+++..++.|+.||+.||+|||+++            ++.  ..          
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~  211 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK  211 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence            79999999985 999999762   347999999999999999999999998            000  00          


Q ss_pred             -------hHhhhcCCCC---HHHhhhh-----CCCCCC------------------CCCCCCCCC-------cc--c---
Q 019844          209 -------EIIKVLGTPT---REEIKCM-----NPNYTE------------------FKFPQIKPH-------PW--H---  243 (335)
Q Consensus       209 -------~~~~~~g~~~---~~~~~~~-----~~~~~~------------------~~~~~~~~~-------~~--~---  243 (335)
                             .....+||+.   ++.+...     ...|..                  ..+......       .+  .   
T Consensus       212 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~  291 (412)
T 2vd5_A          212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSL  291 (412)
T ss_dssp             CCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC
T ss_pred             ccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCC
Confidence                   0011234443   2222110     001110                  001000000       00  0   


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCC---CCHHHHhcCcccccCCCCCC
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLR---CTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R---~t~~~~L~hp~f~~~~~~~~  289 (335)
                      ..++..+|+++++||++||+ ||.+|   ++++++++||||+.+.+...
T Consensus       292 p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l  339 (412)
T 2vd5_A          292 PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGL  339 (412)
T ss_dssp             C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTS
T ss_pred             CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence            01124689999999999999 99998   58999999999999877543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.95  E-value=1.8e-28  Score=214.49  Aligned_cols=198  Identities=22%  Similarity=0.321  Sum_probs=143.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|.+.+.||+|+||.||+|.+..+++.||+|++.+.       ...+.+|+.+++.++||||+++++++     ...
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   86 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF-----HDR   86 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE-----EcC
Confidence            345799999999999999999999999999999998542       24577999999999999999999999     455


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhhc----
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKVL----  214 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~~----  214 (335)
                      ..+|+||||++| +|.+++..    .+.+++..++.++.||+.||.|||++++            + .....+..+    
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV  162 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccc
Confidence            668999999986 99999886    5679999999999999999999999980            0 000001111    


Q ss_pred             -----------CCCC---HHHhhhhCCCCC----------------CCCCCCCCCC-------ccccccccCCChHHHHH
Q 019844          215 -----------GTPT---REEIKCMNPNYT----------------EFKFPQIKPH-------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       215 -----------g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~-------~~~~~~~~~~s~~~~~l  257 (335)
                                 |++.   ++.+........                ...+......       .....++..+++++.+|
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  242 (284)
T 2vgo_A          163 HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL  242 (284)
T ss_dssp             ECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHH
T ss_pred             cCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHH
Confidence                       1111   111110000000                0000000000       00112346689999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+|||+.++|+||||+....
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             HHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            99999999999999999999999987543

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.95  E-value=2.9e-28  Score=212.08  Aligned_cols=115  Identities=25%  Similarity=0.276  Sum_probs=101.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|++++.||+|+||.||+|.++.+++.||||++....     ..+.+|+.+++.++||||+++++++     .....
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~   79 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNI   79 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EETTE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEE-----EcCCE
Confidence            3467999999999999999999999999999999986432     4577999999999999999999999     45566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||||++| +|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        80 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~  125 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIG  125 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8999999996 99888764    557999999999999999999999998

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.95  E-value=6.6e-28  Score=212.23  Aligned_cols=199  Identities=23%  Similarity=0.334  Sum_probs=142.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------------chhHHHHHHHHHhCC-CCceeeeceeee
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------------KRYKNRELQIMQMLD-HPNIVALKHCFF  145 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------------~~~~~~Ei~~l~~l~-hpnIv~~~~~~~  145 (335)
                      ..++|++.+.||+|+||.||+|.++.+++.||||++...             ...+.+|+.+++.+. ||||+++++++ 
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~-   93 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY-   93 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE-
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee-
Confidence            345699999999999999999999999999999998632             134568999999995 99999999999 


Q ss_pred             eCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHh
Q 019844          146 STTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEII  211 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~  211 (335)
                          ....++|+||||++| +|.+++..    ...+++..++.++.||+.||.|||++++            +. ....+
T Consensus        94 ----~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A           94 ----ETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             ----ECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEE
T ss_pred             ----ccCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEE
Confidence                556679999999995 99999986    5679999999999999999999999980            00 00000


Q ss_pred             hh----------------cCCCC---HHHhhhh----CCCCCC------------------CCCCCCC-----------C
Q 019844          212 KV----------------LGTPT---REEIKCM----NPNYTE------------------FKFPQIK-----------P  239 (335)
Q Consensus       212 ~~----------------~g~~~---~~~~~~~----~~~~~~------------------~~~~~~~-----------~  239 (335)
                      ..                .|++.   ++.+...    ...+..                  ..+....           .
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  245 (298)
T 1phk_A          166 TDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN  245 (298)
T ss_dssp             CCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             ecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCC
Confidence            01                11111   2211100    000100                  0000000           0


Q ss_pred             CccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          240 HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      ..+....+..+++++.+||.+||+.||.+|||+.++|+||||++....
T Consensus       246 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~  293 (298)
T 1phk_A          246 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVE  293 (298)
T ss_dssp             CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC--
T ss_pred             cccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhccch
Confidence            000111124678999999999999999999999999999999987543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=7.1e-28  Score=213.97  Aligned_cols=119  Identities=28%  Similarity=0.411  Sum_probs=97.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCC------
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTD------  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~------  149 (335)
                      ...+|++++.||+|+||.||+|.+..+++.||||++....    +.+.+|+.+++.++||||+++++++.....      
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A            9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            3456999999999999999999999999999999986432    456799999999999999999998743211      


Q ss_pred             ---CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 ---KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ---~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                         .....+|+||||++|+|.+++.     .+.+++..++.++.||+.||.|||+++
T Consensus        89 ~~~~~~~~~~lv~e~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~  140 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYMETDLANVLE-----QGPLLEEHARLFMYQLLRGLKYIHSAN  140 (320)
T ss_dssp             --CCSCSEEEEEEECCSEEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccCceeEEeeccCCCHHHHhh-----cCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence               2346689999999999998885     467999999999999999999999998

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=1.1e-27  Score=213.90  Aligned_cols=115  Identities=25%  Similarity=0.365  Sum_probs=100.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...++|++++.||+|+||.||+|++..+++.||||++... .+.+.+|+.+++.+. ||||+++++++..   ....+++
T Consensus        33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~~~~  109 (330)
T 3nsz_A           33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTPA  109 (330)
T ss_dssp             EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCCEE
T ss_pred             cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCCceE
Confidence            3446799999999999999999999999999999999743 466889999999996 9999999999843   2245588


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.+ +|.+++.       .+++..++.++.||+.||.|||+++
T Consensus       110 lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~  150 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSMG  150 (330)
T ss_dssp             EEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 8877764       3899999999999999999999998

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=7.1e-28  Score=212.45  Aligned_cols=199  Identities=22%  Similarity=0.352  Sum_probs=141.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++...    ...+.+|+.+++.++||||+++++++.     ....
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   90 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY-----HDGK   90 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CC-C
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-----eCCe
Confidence            3445699999999999999999999999999999998642    255778999999999999999999994     4445


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc--------------------ChHH--h--
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV--------------------DQLV--E--  209 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~--------------------~~~~--~--  209 (335)
                      +|+||||++| +|.+++...   ...+++..++.++.||+.||.|||++++                    ..+.  .  
T Consensus        91 ~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  167 (302)
T 2j7t_A           91 LWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKN  167 (302)
T ss_dssp             EEEEEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred             EEEEEEeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence            8999999996 998888753   4669999999999999999999999980                    0000  0  


Q ss_pred             ------HhhhcCCCC---HHHhhh---hCCCCCC------------------CCCCCCC----------CCccccccccC
Q 019844          210 ------IIKVLGTPT---REEIKC---MNPNYTE------------------FKFPQIK----------PHPWHKVFQKR  249 (335)
Q Consensus       210 ------~~~~~g~~~---~~~~~~---~~~~~~~------------------~~~~~~~----------~~~~~~~~~~~  249 (335)
                            .....|++.   ++.+..   ....+..                  ..+....          ........+..
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (302)
T 2j7t_A          168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK  247 (302)
T ss_dssp             HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGG
T ss_pred             cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccc
Confidence                  001123322   222210   0001100                  0000000          00001122356


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ++.++.+||.+||+.||.+|||+.++++||||+...
T Consensus       248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             SCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             cCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            789999999999999999999999999999998764

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.95  E-value=1.2e-27  Score=213.03  Aligned_cols=196  Identities=27%  Similarity=0.378  Sum_probs=140.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhCCCCceeeeceeeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQMLDHPNIVALKHCFFS  146 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l~hpnIv~~~~~~~~  146 (335)
                      ...++|.+.+.||+|+||.||+|.++.+++.||||++....            ..+.+|+.+++.++||||+++++++. 
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-   85 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-   85 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc-
Confidence            34567999999999999999999999999999999986421            24679999999999999999999983 


Q ss_pred             CCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--H---H
Q 019844          147 TTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--L---V  208 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~---~  208 (335)
                          ... +|+||||++| +|.+++..    ...+++..++.++.||+.||.|||+++            ++.  .   .
T Consensus        86 ----~~~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~  156 (322)
T 2ycf_A           86 ----AED-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI  156 (322)
T ss_dssp             ----SSS-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCE
T ss_pred             ----CCc-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeE
Confidence                222 7899999986 99888865    567999999999999999999999998            000  0   0


Q ss_pred             ---------------hHhhhcCCCC---HHHhhh-hCCCCCC------------------CCCCCCCC------------
Q 019844          209 ---------------EIIKVLGTPT---REEIKC-MNPNYTE------------------FKFPQIKP------------  239 (335)
Q Consensus       209 ---------------~~~~~~g~~~---~~~~~~-~~~~~~~------------------~~~~~~~~------------  239 (335)
                                     ......|++.   ++.+.. ....|..                  ..+.....            
T Consensus       157 kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  236 (322)
T 2ycf_A          157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK  236 (322)
T ss_dssp             EECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC
T ss_pred             EEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc
Confidence                           0011223322   222110 0111110                  00100000            


Q ss_pred             CccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          240 HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ..+....+..+++++.+||.+||+.||++|||+.++|+||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          237 YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            001112235689999999999999999999999999999999764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=3.1e-28  Score=230.83  Aligned_cols=199  Identities=25%  Similarity=0.341  Sum_probs=145.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|.+.+.||+|+||.||+|+++.+|+.||||++.+.       ...+.+|+.+|+.++|||||+++++|     .+.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~  256 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETK  256 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeC
Confidence            345699999999999999999999999999999999642       23467899999999999999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-------------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-------------  206 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-------------  206 (335)
                      .++|+|||||+| +|.+++....  ...+++..++.|+.||+.||.|||+++            ++.             
T Consensus       257 ~~l~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~  334 (576)
T 2acx_A          257 DALCLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV  334 (576)
T ss_dssp             SEEEEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccce
Confidence            679999999985 9999887522  345999999999999999999999998            000             


Q ss_pred             ----HHhHhhhcCCCCH---HHhh---------------------hhCCCCCCCCCCCCCCC-------ccccccccCCC
Q 019844          207 ----LVEIIKVLGTPTR---EEIK---------------------CMNPNYTEFKFPQIKPH-------PWHKVFQKRLP  251 (335)
Q Consensus       207 ----~~~~~~~~g~~~~---~~~~---------------------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~s  251 (335)
                          .......+|++.+   +.+.                     .+.+.|..... .....       .....++..++
T Consensus       335 ~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~-~~~~~~i~~~i~~~~~~~p~~~s  413 (576)
T 2acx_A          335 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK-KIKREEVERLVKEVPEEYSERFS  413 (576)
T ss_dssp             ECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS-CCCHHHHHHHHHHCCCCCCTTSC
T ss_pred             ecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc-chhHHHHHHHhhcccccCCccCC
Confidence                0000112344332   1111                     01111111000 00000       01123456789


Q ss_pred             hHHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      +++++||.+||+.||.+||     ++.|+++||||+.+.+
T Consensus       414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCH
Confidence            9999999999999999999     7999999999998754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=3.8e-28  Score=224.52  Aligned_cols=200  Identities=21%  Similarity=0.288  Sum_probs=145.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|+++++||+|+||+||+|+++.+++.||+|++.+.       ...+.+|+.++..++||||++++++|     .+..
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~-----~~~~  147 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF-----QDDN  147 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE-----ECSS
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----eeCC
Confidence            35799999999999999999999999999999999642       23477999999999999999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HHhH---------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LVEI---------  210 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~~~---------  210 (335)
                      ++|+|||||+| +|.+++...   .+.+++..++.|+.||+.||.|||+++            ++. ....         
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~  224 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  224 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence            79999999985 999998752   367999999999999999999999998            000 0000         


Q ss_pred             ---------hhhcCCCC---HHHhhhh---CCCCCC------------------CCCCCCC---------CCccccccc-
Q 019844          211 ---------IKVLGTPT---REEIKCM---NPNYTE------------------FKFPQIK---------PHPWHKVFQ-  247 (335)
Q Consensus       211 ---------~~~~g~~~---~~~~~~~---~~~~~~------------------~~~~~~~---------~~~~~~~~~-  247 (335)
                               ...+||+.   ++.+...   ...|..                  ..+....         .......+| 
T Consensus       225 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~  304 (437)
T 4aw2_A          225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPT  304 (437)
T ss_dssp             CCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCS
T ss_pred             cccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCc
Confidence                     01234433   2222110   011110                  0010000         000001122 


Q ss_pred             --cCCChHHHHHHHHhccCCCCC--CCCHHHHhcCcccccCCCCC
Q 019844          248 --KRLPPEAVDLVCRFFQYSPNL--RCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       248 --~~~s~~~~~li~~~L~~dP~~--R~t~~~~L~hp~f~~~~~~~  288 (335)
                        ..+++++++||++||+.+|++  |++++|+++||||+.+.+..
T Consensus       305 ~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~  349 (437)
T 4aw2_A          305 QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDN  349 (437)
T ss_dssp             SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTT
T ss_pred             ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHH
Confidence              348999999999999999988  99999999999999987643

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=1.4e-27  Score=214.11  Aligned_cols=204  Identities=17%  Similarity=0.191  Sum_probs=139.0

Q ss_pred             cceeeeEEee-eeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           79 KQKVSYIAEH-VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        79 ~~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ...++|.+.+ +||+|+||.||+|.++.+++.||||++........+....++.++||||+++++++.... ....++++
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~l  103 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMH-HGKRCLLI  103 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCCceEEE
Confidence            4556799955 699999999999999999999999999765444444445567789999999999985422 23566899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC----hHHhHhhhc------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD----QLVEIIKVL------  214 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~----~~~~~~~~~------  214 (335)
                      |||||+| +|.+++....  ...+++..++.++.||+.||.|||+++            +.    .....+..+      
T Consensus       104 v~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          104 IMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET  181 (336)
T ss_dssp             EEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence            9999996 9999998632  346999999999999999999999998            10    000011111      


Q ss_pred             ---------CCCCH---HHh---------------------hhhCCCCCCCCCCC--------C--CCCccccccccCCC
Q 019844          215 ---------GTPTR---EEI---------------------KCMNPNYTEFKFPQ--------I--KPHPWHKVFQKRLP  251 (335)
Q Consensus       215 ---------g~~~~---~~~---------------------~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~s  251 (335)
                               |++.+   +.+                     ..+.+.|.......        +  ....+....+..++
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (336)
T 3fhr_A          182 TQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS  261 (336)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCC
T ss_pred             cccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCC
Confidence                     12111   000                     00111111000000        0  00011111224689


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      +++.+||.+||+.||.+|||+.++|+||||++..
T Consensus       262 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          262 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            9999999999999999999999999999998753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=1.9e-28  Score=231.55  Aligned_cols=202  Identities=21%  Similarity=0.255  Sum_probs=147.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|.+.++||+|+||.||+|+++.+|+.||||++.+.       ...+.+|+.+|+.++||||++++++|     ...
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~  257 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETK  257 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeC
Confidence            346799999999999999999999999999999999642       24467899999999999999999999     556


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HH---------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LV---------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~---------  208 (335)
                      .++|+|||||+| +|.+++.........+++..++.|+.||+.||.|||+++            ++.  ..         
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV  337 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceee
Confidence            669999999996 999998764433457999999999999999999999998            000  00         


Q ss_pred             -------hHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCCC--C---------ccccccccCCC
Q 019844          209 -------EIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIKP--H---------PWHKVFQKRLP  251 (335)
Q Consensus       209 -------~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~~--~---------~~~~~~~~~~s  251 (335)
                             .....+||+.+....... ..|..                  ..+.....  .         .....++..++
T Consensus       338 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s  417 (543)
T 3c4z_A          338 ELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFS  417 (543)
T ss_dssp             ECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred             eccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccC
Confidence                   001124544421111100 00100                  01110000  0         00123456789


Q ss_pred             hHHHHHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      +++.+||.+||+.||.+||+     +.++++||||+.+.+
T Consensus       418 ~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          418 PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence            99999999999999999996     589999999998654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=4e-28  Score=216.16  Aligned_cols=195  Identities=24%  Similarity=0.293  Sum_probs=139.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .|...+.||+|+||.||+|+++.+|+.||||++...    ...+.+|+.+++.++||||+++++++.     ....+|+|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL-----VGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEEEE
Confidence            488889999999999999999999999999998642    245779999999999999999999994     44558999


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhh------------
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIK------------  212 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~------------  212 (335)
                      |||++| +|.+++.     ...+++..++.++.||+.||.|||++++            + .....+.            
T Consensus       121 ~e~~~~~~L~~~l~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~  195 (321)
T 2c30_A          121 MEFLQGGALTDIVS-----QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV  195 (321)
T ss_dssp             ECCCCSCBHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             EecCCCCCHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCc
Confidence            999986 9998876     3569999999999999999999999980            0 0000011            


Q ss_pred             -----hcCCCC---HHHhhh---------------------hCCCCCCCCCCC----CCCC-ccccccccCCChHHHHHH
Q 019844          213 -----VLGTPT---REEIKC---------------------MNPNYTEFKFPQ----IKPH-PWHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       213 -----~~g~~~---~~~~~~---------------------~~~~~~~~~~~~----~~~~-~~~~~~~~~~s~~~~~li  258 (335)
                           ..|++.   ++.+..                     +.+.|.......    +... ......+..+++++.+||
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  275 (321)
T 2c30_A          196 PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFL  275 (321)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHH
T ss_pred             cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHH
Confidence                 122221   111110                     000000000000    0000 000011235789999999


Q ss_pred             HHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          259 CRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       259 ~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      .+||+.||++|||+.++|+||||.+...|
T Consensus       276 ~~~l~~dp~~Rps~~ell~hp~~~~~~~~  304 (321)
T 2c30_A          276 ERMLVRDPQERATAQELLDHPFLLQTGLP  304 (321)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGGGCCCG
T ss_pred             HHHccCChhhCcCHHHHhcChhhccCCCc
Confidence            99999999999999999999999876543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.95  E-value=4.3e-28  Score=220.29  Aligned_cols=195  Identities=22%  Similarity=0.289  Sum_probs=134.4

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      |...+.||+|+||.||+|.+..+|+.||+|++...    ...+.+|+.+|+.++||||+++++++     .....+||||
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~-----~~~~~~~lv~  165 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF-----ESKNDIVLVM  165 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEEEEEE
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEEEE
Confidence            44478999999999999999999999999999753    35678999999999999999999999     5556699999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c--Ch-HHhHhhhc---------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V--DQ-LVEIIKVL---------  214 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~--~~-~~~~~~~~---------  214 (335)
                      |||+| +|.+++...   ...+++..++.++.||+.||.|||+++            +  +. ....+..+         
T Consensus       166 E~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          166 EYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             ECCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred             eCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence            99986 998888652   346999999999999999999999998            1  00 00011111         


Q ss_pred             -------CCCC---HHHhhh---------------------hCCCCCCCCC----CCCC--CCccccccccCCChHHHHH
Q 019844          215 -------GTPT---REEIKC---------------------MNPNYTEFKF----PQIK--PHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       215 -------g~~~---~~~~~~---------------------~~~~~~~~~~----~~~~--~~~~~~~~~~~~s~~~~~l  257 (335)
                             |++.   ++.+..                     +.+.|.....    ..+.  ...+....+..+++++.+|
T Consensus       243 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  322 (373)
T 2x4f_A          243 EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEF  322 (373)
T ss_dssp             CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHH
T ss_pred             cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHH
Confidence                   2222   111100                     0000000000    0000  0001111225689999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      |.+||+.||.+|||+.++|+||||++...
T Consensus       323 i~~~L~~dp~~Rps~~e~l~hp~~~~~~~  351 (373)
T 2x4f_A          323 ISKLLIKEKSWRISASEALKHPWLSDHKL  351 (373)
T ss_dssp             HHTTSCSSGGGSCCHHHHHHSHHHHCHHH
T ss_pred             HHHHcCCChhhCCCHHHHhcCcCcCCCch
Confidence            99999999999999999999999987643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=4.9e-28  Score=213.80  Aligned_cols=203  Identities=21%  Similarity=0.316  Sum_probs=142.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .++|++++.||+|+||.||+|.+..+++.||+|++...        ...+.+|+.+++.++||||+++++++..   ...
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~   80 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK   80 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence            45799999999999999999999999999999999642        2457799999999999999999999853   233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhhc-----
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKVL-----  214 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~~-----  214 (335)
                      ..+|+||||++++|.+++....  ...+++..++.++.||+.||.|||++++            +. ....+..+     
T Consensus        81 ~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~  158 (305)
T 2wtk_C           81 QKMYMVMEYCVCGMQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEA  158 (305)
T ss_dssp             -CEEEEEECCSEEHHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CeEEEEehhccCCHHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence            4588999999988888877643  4679999999999999999999999980            00 00000011     


Q ss_pred             --------------CCCC---HHHhhhhCCCCC------------------CCCCCCCCCC-------ccccccccCCCh
Q 019844          215 --------------GTPT---REEIKCMNPNYT------------------EFKFPQIKPH-------PWHKVFQKRLPP  252 (335)
Q Consensus       215 --------------g~~~---~~~~~~~~~~~~------------------~~~~~~~~~~-------~~~~~~~~~~s~  252 (335)
                                    |++.   ++.+......+.                  ...+......       .....++..+++
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  238 (305)
T 2wtk_C          159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGP  238 (305)
T ss_dssp             CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCH
T ss_pred             cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCH
Confidence                          1111   111110000000                  0000000000       000123457899


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      ++.+||.+||+.||.+|||+.++++||||+....+.
T Consensus       239 ~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~  274 (305)
T 2wtk_C          239 PLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPA  274 (305)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCCC-
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCcccccCCCCc
Confidence            999999999999999999999999999999876543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.95  E-value=1.5e-27  Score=218.68  Aligned_cols=202  Identities=18%  Similarity=0.169  Sum_probs=138.7

Q ss_pred             ceeeeEEe-eeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHH-hCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAE-HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQ-MLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~-~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..++|.+. ++||+|+||+||+|.++.+++.||||++.. .....+|+.++. .++||||++++++|.... .+..++||
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~~~~~~l  136 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLLI  136 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-chhHHHHHHHHHHhcCCCCcceEeEEEeecc-cCCcEEEE
Confidence            34567776 799999999999999999999999999964 456778999874 458999999999984321 23567899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC----hHHhHhhh-------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD----QLVEIIKV-------  213 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~----~~~~~~~~-------  213 (335)
                      |||||+| +|.+++....  ...+++..++.|+.||+.||.|||+++            ++    .....+..       
T Consensus       137 v~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          137 VMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  214 (400)
T ss_dssp             EEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence            9999986 9999997522  346999999999999999999999988            11    00011111       


Q ss_pred             ---------cCCCCHHHhh------------------------hhCCCCCCCCCCCCC----------CCccccccccCC
Q 019844          214 ---------LGTPTREEIK------------------------CMNPNYTEFKFPQIK----------PHPWHKVFQKRL  250 (335)
Q Consensus       214 ---------~g~~~~~~~~------------------------~~~~~~~~~~~~~~~----------~~~~~~~~~~~~  250 (335)
                               +|++.+....                        .+.+.|.........          ...+....+..+
T Consensus       215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  294 (400)
T 1nxk_A          215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV  294 (400)
T ss_dssp             C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTS
T ss_pred             CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccC
Confidence                     2222211000                        000111000000000          000011112468


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ++++.+||++||+.||++|||+.++|+||||.+..
T Consensus       295 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            99999999999999999999999999999998653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=1.1e-27  Score=215.72  Aligned_cols=197  Identities=23%  Similarity=0.284  Sum_probs=141.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..+|.+.+.||+|+||.||+|++..+++.||||++....       ..+.+|+.+++.++||||+++++++     ....
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~  127 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY-----LREH  127 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETT
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence            346999999999999999999999999999999986421       3567999999999999999999999     4445


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh--------
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK--------  212 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~--------  212 (335)
                      .+|+|||||.|+|.+++...   ...+++..++.++.||+.||.|||++++            +. ....+.        
T Consensus       128 ~~~lv~e~~~g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  204 (348)
T 1u5q_A          128 TAWLVMEYCLGSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  204 (348)
T ss_dssp             EEEEEEECCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             eEEEEEecCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence            68999999999888887642   4679999999999999999999999981            00 000011        


Q ss_pred             -----hcCCCC---HHHhhhh-CCCCCC------------------CCCCCCC---------CCccccccccCCChHHHH
Q 019844          213 -----VLGTPT---REEIKCM-NPNYTE------------------FKFPQIK---------PHPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       213 -----~~g~~~---~~~~~~~-~~~~~~------------------~~~~~~~---------~~~~~~~~~~~~s~~~~~  256 (335)
                           ..|++.   ++.+... ...|..                  ..+....         ........+..+++.+.+
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  284 (348)
T 1u5q_A          205 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  284 (348)
T ss_dssp             SSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHH
T ss_pred             CCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHH
Confidence                 122222   2222100 001100                  0000000         000011123467899999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ||.+||+.||++|||+.++|+||||....
T Consensus       285 li~~~l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          285 FVDSCLQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             HHHHHcccChhhCcCHHHHhhChhhhccC
Confidence            99999999999999999999999998643

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=1e-27  Score=215.51  Aligned_cols=203  Identities=26%  Similarity=0.347  Sum_probs=141.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ....+|++.+.||+|+||.||+|.+..+++.||+|++.+.         ...+.+|+.+++.++||||+++++++     
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----   97 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY-----   97 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh-----
Confidence            3456899999999999999999999999999999998642         24577899999999999999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhh------------------------------------cCCCCHHHHHHHHHHH
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRI------------------------------------HQRMPLIYVKLYTYQI  192 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~qi  192 (335)
                      ....++|+|||||+| +|.+++......                                    ...+++..++.|+.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            556679999999985 999887421000                                    1124678899999999


Q ss_pred             HHHHHHHHhCC------------c--ChH-HhHhhhc---------------------CCCC---HHHhhhhCCCCCC--
Q 019844          193 CRALAYIHNCI------------V--DQL-VEIIKVL---------------------GTPT---REEIKCMNPNYTE--  231 (335)
Q Consensus       193 ~~aL~yLH~~~------------~--~~~-~~~~~~~---------------------g~~~---~~~~~~~~~~~~~--  231 (335)
                      +.||.|||+++            +  +.. ...+..+                     |++.   ++.+......|..  
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  257 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC  257 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence            99999999998            1  000 0011111                     2221   1211110011110  


Q ss_pred             ----------------CCCCCCC-----------CCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          232 ----------------FKFPQIK-----------PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       232 ----------------~~~~~~~-----------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                                      ..+....           ...+.......+++++.+||.+||+.||.+|||+.++|+||||+++
T Consensus       258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF  337 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccC
Confidence                            0000000           0000111123478999999999999999999999999999999987


Q ss_pred             CC
Q 019844          285 RD  286 (335)
Q Consensus       285 ~~  286 (335)
                      .+
T Consensus       338 ~~  339 (345)
T 3hko_A          338 SD  339 (345)
T ss_dssp             SS
T ss_pred             hH
Confidence            54

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=4e-27  Score=211.66  Aligned_cols=197  Identities=21%  Similarity=0.238  Sum_probs=141.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCC--CceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDH--PNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~h--pnIv~~~~~~~~~~~~~~  152 (335)
                      ..+|++++.||+|+||.||+|.+ .+++.||||++....      ..+.+|+.+|+.++|  |||+++++++     ...
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~~~   81 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----ITD   81 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECS
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE-----eeC
Confidence            45699999999999999999998 568999999986421      456789999999976  9999999999     555


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC------------h-HH-----------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD------------Q-LV-----------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~------------~-~~-----------  208 (335)
                      .++|+|||++.|+|.+++..    .+.+++..++.|+.||+.||.|||++++-            . ..           
T Consensus        82 ~~~~lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           82 QYIYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQM  157 (343)
T ss_dssp             SEEEEEECCCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC
T ss_pred             CEEEEEEeCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeeccccccc
Confidence            67999999877899999986    67899999999999999999999999800            0 00           


Q ss_pred             -------hHhhhcCCCC---HHHhhhhC---------CCCC------------------CCCCCCCCC----------Cc
Q 019844          209 -------EIIKVLGTPT---REEIKCMN---------PNYT------------------EFKFPQIKP----------HP  241 (335)
Q Consensus       209 -------~~~~~~g~~~---~~~~~~~~---------~~~~------------------~~~~~~~~~----------~~  241 (335)
                             .....+|++.   ++.+....         ..|.                  ...+.....          ..
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  237 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN  237 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCC
Confidence                   0012234433   22221100         0000                  000110000          01


Q ss_pred             cccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          242 WHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      ....++...++++.+||.+||+.||.+|||+.++|+||||+....|
T Consensus       238 ~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~  283 (343)
T 3dbq_A          238 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  283 (343)
T ss_dssp             SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC-
T ss_pred             cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCCc
Confidence            1123445667899999999999999999999999999999865444

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-26  Score=209.65  Aligned_cols=197  Identities=23%  Similarity=0.329  Sum_probs=144.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc--------chhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD--------KRYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      .++|++++.||+|+||.||+|++.   .+++.||||++.+.        ...+.+|+.+++.+ +||||+++++++    
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~----  128 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF----  128 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE----
Confidence            457999999999999999999984   58999999998642        24567899999999 799999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c-----------
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V-----------  204 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~-----------  204 (335)
                       .....+|+|||||+| +|.+++..    ...+++..++.++.||+.||.|||+++            +           
T Consensus       129 -~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Df  203 (355)
T 1vzo_A          129 -QTETKLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF  203 (355)
T ss_dssp             -EETTEEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred             -eeCceEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeC
Confidence             455568999999996 99999986    567999999999999999999999988            0           


Q ss_pred             --------ChHHhHhhhcCCCCH---HHhhhhCCCCC--------------------CCCCCCCCCC---------cccc
Q 019844          205 --------DQLVEIIKVLGTPTR---EEIKCMNPNYT--------------------EFKFPQIKPH---------PWHK  244 (335)
Q Consensus       205 --------~~~~~~~~~~g~~~~---~~~~~~~~~~~--------------------~~~~~~~~~~---------~~~~  244 (335)
                              .........+|++.+   +.+......+.                    +|........         ....
T Consensus       204 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  283 (355)
T 1vzo_A          204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP  283 (355)
T ss_dssp             SEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC
T ss_pred             CCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC
Confidence                    000111123444432   22211011111                    0100000000         0012


Q ss_pred             ccccCCChHHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          245 VFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .++..+++.+.+||.+||..||.+||     ++.++++||||+.+.+
T Consensus       284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~  330 (355)
T 1vzo_A          284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  330 (355)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCCh
Confidence            24567889999999999999999999     9999999999998754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.95  E-value=6e-28  Score=218.39  Aligned_cols=115  Identities=19%  Similarity=0.353  Sum_probs=102.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++...     ...+.+|+.+++.++||||+++++++     .....
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~  105 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGE  105 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE-----EETTE
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE-----EECCE
Confidence            345799999999999999999999999999999998643     24577999999999999999999999     44556


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      +|+||||++| +|.+++..    .+.+++..++.++.||+.||.|||+. +
T Consensus       106 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~~  152 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHK  152 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEECCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999986 99999986    56799999999999999999999985 5

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.95  E-value=5.3e-27  Score=212.10  Aligned_cols=117  Identities=21%  Similarity=0.301  Sum_probs=102.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCC-----CCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLD-----HPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~-----hpnIv~~~~~~~~~~~~~  151 (335)
                      ..++|.++++||+|+||.||+|++..+++.||||++...   .....+|+.+++.+.     |||||++++++     ..
T Consensus        33 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~-----~~  107 (360)
T 3llt_A           33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF-----MY  107 (360)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE-----EE
T ss_pred             ecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccccee-----eE
Confidence            345699999999999999999999999999999999643   245678999999996     99999999999     44


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++|+||||+.++|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus       108 ~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (360)
T 3llt_A          108 YDHMCLIFEPLGPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKMS  157 (360)
T ss_dssp             TTEEEEEECCCCCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeeEEEEcCCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            55699999999779999998633  346999999999999999999999998

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.95  E-value=6e-28  Score=215.59  Aligned_cols=202  Identities=19%  Similarity=0.241  Sum_probs=144.1

Q ss_pred             cceeeeEEe-eeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAE-HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~-~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~  150 (335)
                      ...++|.+. +.||+|+||.||+|.++.+++.||+|++.+.      ...+.+|+.+++.+ +||||+++++++     .
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~-----~   99 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY-----E   99 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE-----E
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE-----E
Confidence            455678888 8999999999999999999999999998642      24577999999999 569999999999     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-----HHhH--
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-----LVEI--  210 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-----~~~~--  210 (335)
                      ....+|+|||||.| +|.+++....  ...+++..++.++.||+.||.|||+++            ++.     ..++  
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D  177 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD  177 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence            56669999999996 9988875321  367999999999999999999999998            000     0000  


Q ss_pred             -------------hhhcCCCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCccccc
Q 019844          211 -------------IKVLGTPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPWHKV  245 (335)
Q Consensus       211 -------------~~~~g~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~~~  245 (335)
                                   ....|++.   ++.+...  .+..                  ..+...           ....+...
T Consensus       178 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  255 (327)
T 3lm5_A          178 FGMSRKIGHACELREIMGTPEYLAPEILNYD--PITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEE  255 (327)
T ss_dssp             GGGCEEC---------CCCGGGCCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             CccccccCCccccccccCCcCccCCeeecCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCch
Confidence                         11123322   1111100  0000                  000000           00011112


Q ss_pred             cccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          246 FQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       246 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      .+..+++.+.+||.+||+.||.+|||+.++|+||||++..+...
T Consensus       256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~  299 (327)
T 3lm5_A          256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL  299 (327)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC
T ss_pred             hhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcccccccc
Confidence            22468899999999999999999999999999999998866433

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.95  E-value=1.6e-27  Score=208.89  Aligned_cols=199  Identities=21%  Similarity=0.281  Sum_probs=142.9

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ....+|++.+.||+|+||.||+|.++.+++.||||++...      ...+.+|+.+++.++||||+++++++     ...
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~   93 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL-----EDS   93 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE-----eCC
Confidence            3456899999999999999999999999999999998542      24577999999999999999999999     455


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH----HhHhhhcC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL----VEIIKVLG  215 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~----~~~~~~~g  215 (335)
                      ..+|+||||+.| +|.+++..    ...+++..++.++.||+.||.|||+++            ++..    ...+..+|
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             CeEEEEEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence            568999999986 99888876    467999999999999999999999998            1000    00011111


Q ss_pred             -------------------CCCHHHhh--------------------hhCCCCCCCCCCC----C--CCCccccccccCC
Q 019844          216 -------------------TPTREEIK--------------------CMNPNYTEFKFPQ----I--KPHPWHKVFQKRL  250 (335)
Q Consensus       216 -------------------~~~~~~~~--------------------~~~~~~~~~~~~~----~--~~~~~~~~~~~~~  250 (335)
                                         ..+++.+.                    .+.+.|.......    +  ....+....+..+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (287)
T 2wei_A          170 LSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTI  249 (287)
T ss_dssp             GGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTS
T ss_pred             cceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhc
Confidence                               00111110                    0001110000000    0  0000111112467


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ++++.+||.+||+.||.+|||+.++|+||||++...
T Consensus       250 ~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  285 (287)
T 2wei_A          250 SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHCC
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcccc
Confidence            899999999999999999999999999999987643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=2e-27  Score=215.34  Aligned_cols=194  Identities=23%  Similarity=0.367  Sum_probs=141.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhC-CCCceeeeceeeeeC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQML-DHPNIVALKHCFFST  147 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~  147 (335)
                      .++|.+.+.||+|+||.||+|.++.+|+.||||++....            ..+.+|+.+++.+ +||||+++++++   
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~---  169 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY---  169 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE---
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE---
Confidence            357999999999999999999999999999999986432            3467899999999 899999999999   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HHhH---
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LVEI---  210 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~~~---  210 (335)
                        .....+|+||||++| +|.+++..    ...+++..++.++.||+.||.|||+.|            ++. ....   
T Consensus       170 --~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~D  243 (365)
T 2y7j_A          170 --ESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD  243 (365)
T ss_dssp             --EBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             --eeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEe
Confidence              555669999999997 99999876    567999999999999999999999998            000 0000   


Q ss_pred             -------------hhhcCCCC---HHHhhhh----CCCCCC------------------CCCCCCC-----------CCc
Q 019844          211 -------------IKVLGTPT---REEIKCM----NPNYTE------------------FKFPQIK-----------PHP  241 (335)
Q Consensus       211 -------------~~~~g~~~---~~~~~~~----~~~~~~------------------~~~~~~~-----------~~~  241 (335)
                                   ...+|++.   ++.+...    ...|..                  ..+....           ...
T Consensus       244 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  323 (365)
T 2y7j_A          244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ  323 (365)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             cCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence                         01122222   2222111    001110                  0000000           000


Q ss_pred             cccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          242 WHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      +....+..+++.+.+||.+||+.||++|||+.++|+||||+.
T Consensus       324 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            111122467889999999999999999999999999999973

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=3.1e-27  Score=205.94  Aligned_cols=201  Identities=21%  Similarity=0.282  Sum_probs=145.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .++|++.+.||+|+||.||+|.++.+++.||+|++...      ...+.+|+.+++.++||||+++++++..   .....
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~   81 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT   81 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence            45799999999999999999999999999999999642      2457789999999999999999998853   23456


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----cCh----------------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----VDQ----------------------  206 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----~~~----------------------  206 (335)
                      +|+||||++| +|.+++.........+++..++.++.||+.||.|||+++     +-.                      
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg  161 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence            8999999986 999999876555566999999999999999999999865     100                      


Q ss_pred             HH--------hHhhhcCCCC---HHHhhhhCCCCC------------------CCCCCCCCCC--------ccccccccC
Q 019844          207 LV--------EIIKVLGTPT---REEIKCMNPNYT------------------EFKFPQIKPH--------PWHKVFQKR  249 (335)
Q Consensus       207 ~~--------~~~~~~g~~~---~~~~~~~~~~~~------------------~~~~~~~~~~--------~~~~~~~~~  249 (335)
                      ..        ......|++.   ++.+...  .+.                  ...+......        .....++..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~  239 (279)
T 2w5a_A          162 LARILNHDTSFAKTFVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR  239 (279)
T ss_dssp             HHHHC---CHHHHHHHSCCTTCCHHHHHCC---CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTT
T ss_pred             hheeeccccccccccCCCccccChHHhccC--CCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcc
Confidence            00        0001122222   1211100  000                  0001000000        000123456


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +++++.+||.+||+.||.+|||+.++|+|+|+.+-..
T Consensus       240 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  276 (279)
T 2w5a_A          240 YSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH  276 (279)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence            8999999999999999999999999999999987543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.95  E-value=4.4e-27  Score=209.70  Aligned_cols=203  Identities=19%  Similarity=0.310  Sum_probs=143.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhC-CCCceeeeceeeeeCCC-CCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQML-DHPNIVALKHCFFSTTD-KEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~-~~~~~  154 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++...   ...+.+|+.+++.+ +||||+++++++..... .....
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            345699999999999999999999999999999998643   35678999999999 89999999999965332 11456


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHh---------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEII---------  211 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~---------  211 (335)
                      +|+||||++| +|.+++....  ...+++..++.++.||+.||.|||++++            + .....+         
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  179 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred             EEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence            8999999996 9999998643  4579999999999999999999999980            0 000000         


Q ss_pred             --------hhcCCCC---HHHhhhh---CCCCCC------------------CCCCCCC---------CCccccccccCC
Q 019844          212 --------KVLGTPT---REEIKCM---NPNYTE------------------FKFPQIK---------PHPWHKVFQKRL  250 (335)
Q Consensus       212 --------~~~g~~~---~~~~~~~---~~~~~~------------------~~~~~~~---------~~~~~~~~~~~~  250 (335)
                              ...|++.   ++.+...   ...+..                  ..+....         ........+..+
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (326)
T 2x7f_A          180 DRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW  259 (326)
T ss_dssp             -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCS
T ss_pred             CcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCcccc
Confidence                    1122221   1111100   000000                  0000000         000111123467


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      ++.+.+||.+||..||.+|||+.++|+||||++.
T Consensus       260 ~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            8999999999999999999999999999999865

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=5.3e-27  Score=214.42  Aligned_cols=198  Identities=20%  Similarity=0.213  Sum_probs=140.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCC--CCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLD--HPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~--hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|.+++.||+|+||.||+|.+.. ++.||||++....      ..+.+|+.+|+.++  |||||++++++     ..
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~-----~~  127 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----IT  127 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE-----ec
Confidence            34569999999999999999999864 8999999986432      45679999999996  59999999998     44


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------ChHHh----------
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQLVE----------  209 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~~~~----------  209 (335)
                      ..++|||||++.++|.+++..    ...+++..++.|+.||+.||.|||++++            +....          
T Consensus       128 ~~~~~lv~E~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~  203 (390)
T 2zmd_A          128 DQYIYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQ  203 (390)
T ss_dssp             SSEEEEEEECCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCC
T ss_pred             CCEEEEEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCcccc
Confidence            556999999776799999986    5679999999999999999999999980            00000          


Q ss_pred             ---------HhhhcCCCC---HHHhhhhC---------CCCCC------------------CCCCCCCC----------C
Q 019844          210 ---------IIKVLGTPT---REEIKCMN---------PNYTE------------------FKFPQIKP----------H  240 (335)
Q Consensus       210 ---------~~~~~g~~~---~~~~~~~~---------~~~~~------------------~~~~~~~~----------~  240 (335)
                               ....+|++.   ++.+....         ..|..                  ..+.....          .
T Consensus       204 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~  283 (390)
T 2zmd_A          204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDP  283 (390)
T ss_dssp             C---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCT
T ss_pred             ccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCc
Confidence                     011233333   22221100         00100                  00110000          0


Q ss_pred             ccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCC
Q 019844          241 PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP  287 (335)
Q Consensus       241 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~  287 (335)
                      .....++...++++.+||.+||+.||.+|||+.++|+||||+....|
T Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~  330 (390)
T 2zmd_A          284 NHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  330 (390)
T ss_dssp             TSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC--
T ss_pred             cccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCcc
Confidence            11112345567899999999999999999999999999999876544

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=5.9e-28  Score=234.81  Aligned_cols=198  Identities=21%  Similarity=0.279  Sum_probs=146.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|.++++||+|+||.||+|+++.+++.||||++.+.       ...+.+|..++..+ +||||++++++|     .+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~-----~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC-----BC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE-----Ee
Confidence            345799999999999999999999999999999999643       24467899999988 799999999999     66


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hHH---------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QLV---------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~~---------  208 (335)
                      ..++||||||++| +|..++..    .+.+++..++.|+.||+.||+|||+++            ++ ...         
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla  489 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMC  489 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred             CCEEEEEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeeccee
Confidence            6779999999996 99999986    567999999999999999999999998            00 000         


Q ss_pred             --------hHhhhcCCCCHHHhhhhC-CCCCC------------------CCCCCCCCC-------ccccccccCCChHH
Q 019844          209 --------EIIKVLGTPTREEIKCMN-PNYTE------------------FKFPQIKPH-------PWHKVFQKRLPPEA  254 (335)
Q Consensus       209 --------~~~~~~g~~~~~~~~~~~-~~~~~------------------~~~~~~~~~-------~~~~~~~~~~s~~~  254 (335)
                              .....+||+.+...+... ..|..                  ..+......       .....++..+++++
T Consensus       490 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  569 (674)
T 3pfq_A          490 KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEA  569 (674)
T ss_dssp             EECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHH
T ss_pred             eccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHH
Confidence                    011223443321111100 00100                  001000000       00123556789999


Q ss_pred             HHHHHHhccCCCCCCCCH-----HHHhcCcccccCCC
Q 019844          255 VDLVCRFFQYSPNLRCTA-----LEACVHPFFDELRD  286 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~-----~~~L~hp~f~~~~~  286 (335)
                      .+||++||+.||.+|+++     .+|++||||+.+.+
T Consensus       570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w  606 (674)
T 3pfq_A          570 VAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  606 (674)
T ss_dssp             HHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCH
T ss_pred             HHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCH
Confidence            999999999999999997     99999999998765

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.95  E-value=2e-27  Score=210.76  Aligned_cols=198  Identities=26%  Similarity=0.337  Sum_probs=137.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..++|.+.+.||+|+||.||+|.+..+|+.||||++...  ...+.+|+.+++.++||||+++++++.     ....+|+
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l  101 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYF-----KNTDLWI  101 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEEEE
Confidence            345699999999999999999999999999999999643  356789999999999999999999994     4456899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------C-hHHhHhhh----------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------D-QLVEIIKV----------  213 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~-~~~~~~~~----------  213 (335)
                      ||||++| +|.+++...   ...+++..++.++.||+.||.|||++++            + .....+..          
T Consensus       102 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          102 VMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             EEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred             EeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence            9999996 999998742   5679999999999999999999999980            0 00000011          


Q ss_pred             -------cCCCC---HHHhhhhCCCCC----------------CCCCCCCC----------CCccccccccCCChHHHHH
Q 019844          214 -------LGTPT---REEIKCMNPNYT----------------EFKFPQIK----------PHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       214 -------~g~~~---~~~~~~~~~~~~----------------~~~~~~~~----------~~~~~~~~~~~~s~~~~~l  257 (335)
                             .|++.   ++.+........                ...+....          ........+..+++++.+|
T Consensus       179 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  258 (314)
T 3com_A          179 MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDF  258 (314)
T ss_dssp             BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHH
T ss_pred             ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHH
Confidence                   11111   111100000000                00000000          0000011234578999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      |.+||..||.+|||+.++|+||||+...
T Consensus       259 i~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          259 VKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             HHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             HHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence            9999999999999999999999998754

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.95  E-value=2.3e-27  Score=209.15  Aligned_cols=202  Identities=23%  Similarity=0.302  Sum_probs=125.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|.+.+.||+|+||.||+|.+..+++.||||++...     ...+.+|+.+++.++||||+++++++.     ....
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~   87 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-----VKDE   87 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE-----SSSC
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-----ecCC
Confidence            345799999999999999999999999999999988532     245678999999999999999999994     3445


Q ss_pred             EEEEeecchh-hHHHHHHHHhhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCc--------------------ChHH-
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRI----HQRMPLIYVKLYTYQICRALAYIHNCIV--------------------DQLV-  208 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~~--------------------~~~~-  208 (335)
                      +|+||||++| +|.+++......    ...+++..++.++.||+.||.|||++++                    ..+. 
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            8999999986 999998764321    3459999999999999999999999880                    0000 


Q ss_pred             -h-------------HhhhcCCCC---HHHhhh----------------------hCCCCCCCC------------CCCC
Q 019844          209 -E-------------IIKVLGTPT---REEIKC----------------------MNPNYTEFK------------FPQI  237 (335)
Q Consensus       209 -~-------------~~~~~g~~~---~~~~~~----------------------~~~~~~~~~------------~~~~  237 (335)
                       .             .....|++.   ++.+..                      +.+.|....            .+..
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  247 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL  247 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence             0             001123332   222111                      111111100            0000


Q ss_pred             CCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          238 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       238 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ............+++++.+||.+||+.||.+|||+.++++||||+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence            0000011122467899999999999999999999999999999997654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.95  E-value=6.9e-27  Score=213.82  Aligned_cols=120  Identities=20%  Similarity=0.230  Sum_probs=101.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCC--------CCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLD--------HPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~--------hpnIv~~~~~~~~~~~  149 (335)
                      .++|++.+.||+|+||.||+|++..+++.||||++....   ..+.+|+.+++.+.        |+||++++++|.... 
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~-  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG-  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE-
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC-
Confidence            457999999999999999999999999999999997542   45678999999985        788999999985322 


Q ss_pred             CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          150 KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      ....++|+||||++|+|.+.+....  ...+++..++.|+.||+.||.|||++ |
T Consensus       115 ~~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~g  167 (397)
T 1wak_A          115 VNGTHICMVFEVLGHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKCR  167 (397)
T ss_dssp             TTEEEEEEEECCCCCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCceEEEEEeccCccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            2556799999999887777776532  35799999999999999999999998 7

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.95  E-value=4.9e-27  Score=207.01  Aligned_cols=112  Identities=22%  Similarity=0.231  Sum_probs=93.1

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHH--HHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKN--RELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~--~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +|.+.++||+|+||+||+|++  +|+.||||++.... ....  .|+..+..++|||||++++++.... .....+||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~lV~   80 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLVS   80 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEEEe
Confidence            599999999999999999997  58999999997543 2233  4556667889999999999996533 2234589999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      |||+| +|.+++..     ..+++..+..|+.|++.||+|||++
T Consensus        81 Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~  119 (303)
T 3hmm_A           81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             ECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99995 99999974     4699999999999999999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=8.9e-28  Score=212.95  Aligned_cols=201  Identities=19%  Similarity=0.151  Sum_probs=143.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|++.+.||+|+||.||+|++..+++.||||++....       ..+.+|+.+++.++||||+++++++.... ..
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   87 (311)
T 3ork_A            9 HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PA   87 (311)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TT
T ss_pred             eecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CC
Confidence            44567999999999999999999999999999999996432       34678999999999999999999985433 23


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC-------------hHHhHhh-----
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD-------------QLVEIIK-----  212 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~-------------~~~~~~~-----  212 (335)
                      ..++|+||||++| +|.+++..    .+.+++..++.++.||+.||.|||++++-             .....+.     
T Consensus        88 ~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           88 GPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EEEEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             CcccEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence            3456899999985 99999986    56799999999999999999999999800             0000011     


Q ss_pred             ---------------hcCCCC---HHHhhhhCCCCCC------------------CCCCCCC-----------CCccccc
Q 019844          213 ---------------VLGTPT---REEIKCMNPNYTE------------------FKFPQIK-----------PHPWHKV  245 (335)
Q Consensus       213 ---------------~~g~~~---~~~~~~~~~~~~~------------------~~~~~~~-----------~~~~~~~  245 (335)
                                     .+|++.   ++.+...  .+..                  ..+....           .......
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~  241 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGD--SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA  241 (311)
T ss_dssp             ------------------CCTTCCHHHHHTC--CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHH
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccc
Confidence                           122222   1111100  0000                  0000000           0000011


Q ss_pred             cccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          246 FQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       246 ~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      .+..+++++.+||.+||+.||.+||++.++|.|+|++....
T Consensus       242 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          242 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             HSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred             ccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence            22468999999999999999999999999999999987544

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.95  E-value=1e-26  Score=204.72  Aligned_cols=121  Identities=22%  Similarity=0.267  Sum_probs=103.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCC-------
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTD-------  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-------  149 (335)
                      ..++|++++.||+|+||.||+|++..+++.||||++....   ..+.+|+.+++.++||||+++++++.....       
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            4567999999999999999999999999999999996532   456789999999999999999999864321       


Q ss_pred             -CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 -KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 -~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~  136 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQG  136 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhCC
Confidence             235678999999986 999999852   345788999999999999999999998

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=2.1e-27  Score=209.68  Aligned_cols=194  Identities=20%  Similarity=0.248  Sum_probs=140.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|.+++.||+|+||.||+|.+..+++.||||++...     ...+.+|+.+++.++||||+++++++     .....+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~   95 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY-----LKDTKL   95 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE-----ecCCeE
Confidence            34599999999999999999999999999999998643     25578999999999999999999999     445568


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhhhc-------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIKVL-------  214 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~~~-------  214 (335)
                      |+||||++| +|.+++.     .+.+++..++.++.||+.||.|||++++            +. ....+..+       
T Consensus        96 ~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  170 (303)
T 3a7i_A           96 WIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT  170 (303)
T ss_dssp             EEEEECCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred             EEEEEeCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecC
Confidence            999999996 9998886     4579999999999999999999999980            00 00000111       


Q ss_pred             ----------CCCC---HHHhhhhCCCCC----------------CCCCCCCCCC--------ccccccccCCChHHHHH
Q 019844          215 ----------GTPT---REEIKCMNPNYT----------------EFKFPQIKPH--------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       215 ----------g~~~---~~~~~~~~~~~~----------------~~~~~~~~~~--------~~~~~~~~~~s~~~~~l  257 (335)
                                |++.   ++.+........                ...+......        .....++..+++.+.+|
T Consensus       171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  250 (303)
T 3a7i_A          171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEF  250 (303)
T ss_dssp             TTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHH
T ss_pred             ccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHH
Confidence                      1111   111110000000                0000000000        00112345789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      |.+||+.||.+|||+.++|+||||...
T Consensus       251 i~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          251 VEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            999999999999999999999999764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=1.2e-27  Score=217.92  Aligned_cols=206  Identities=15%  Similarity=0.125  Sum_probs=134.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHH---HHHhCCCCceeeec-------e
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQ---IMQMLDHPNIVALK-------H  142 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~---~l~~l~hpnIv~~~-------~  142 (335)
                      ..++|.+.+.||+|+||.||+|+++.+|+.||||++...       .+.+.+|+.   +++.++|||||+++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            346799999999999999999999999999999998632       245779994   55555899999999       4


Q ss_pred             eeeeCC---------CCCcc---EEEEEeecchhhHHHHHHHHhhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC----
Q 019844          143 CFFSTT---------DKEEL---YLNLVLEYVPETVNRIARNYSRIH---QRMPLIYVKLYTYQICRALAYIHNCI----  203 (335)
Q Consensus       143 ~~~~~~---------~~~~~---~~~iv~e~~~g~L~~~l~~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~----  203 (335)
                      ++....         +....   ..||||||++|+|.+++.......   ..+++..++.|+.||+.||+|||+++    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            442221         01111   378999999889999998743110   11234788889999999999999998    


Q ss_pred             --------cC--hHHhH-------------hhhcC--CCCHHHhhhhC---------CCCCC------------------
Q 019844          204 --------VD--QLVEI-------------IKVLG--TPTREEIKCMN---------PNYTE------------------  231 (335)
Q Consensus       204 --------~~--~~~~~-------------~~~~g--~~~~~~~~~~~---------~~~~~------------------  231 (335)
                              ++  ...++             ...+|  ..+++.+....         ..|..                  
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~  310 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD  310 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence                    00  00000             01112  11233222210         00100                  


Q ss_pred             CCCCCC-CCCcccc--ccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          232 FKFPQI-KPHPWHK--VFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       232 ~~~~~~-~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ..+... ....+..  ..+..+++++.+||.+||+.||++|||+.++|+||||+++.
T Consensus       311 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  367 (377)
T 3byv_A          311 LPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  367 (377)
T ss_dssp             CCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred             CCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence            000000 0001111  11257899999999999999999999999999999998764

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.94  E-value=2.9e-26  Score=208.10  Aligned_cols=121  Identities=28%  Similarity=0.418  Sum_probs=103.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCC-----------CCceeeeceeee
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLD-----------HPNIVALKHCFF  145 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~-----------hpnIv~~~~~~~  145 (335)
                      ...+|++++.||+|+||.||+|++..+++.||||++..+.   ..+.+|+.+++.+.           ||||+++++++.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            3457999999999999999999999999999999997542   45678999999886           899999999985


Q ss_pred             eCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          146 STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      ... .+..++++||||+.++|.+++....  ...+++..++.++.||+.||.|||++ +
T Consensus        97 ~~~-~~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~  152 (373)
T 1q8y_A           97 HKG-PNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCG  152 (373)
T ss_dssp             EEE-TTEEEEEEEECCCCEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccC-CCCceEEEEEecCCCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            432 2345789999999779999998643  45699999999999999999999998 7

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=6e-27  Score=204.52  Aligned_cols=204  Identities=19%  Similarity=0.237  Sum_probs=145.7

Q ss_pred             ccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCC---------
Q 019844           78 SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTT---------  148 (335)
Q Consensus        78 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~---------  148 (335)
                      .....+|++.+.||+|+||.||+|.+..+++.||+|++......+.+|+.+++.++||||+++++++....         
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   86 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN   86 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred             chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence            34566899999999999999999999999999999999877778899999999999999999999884311         


Q ss_pred             --CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch-HHhHhh
Q 019844          149 --DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ-LVEIIK  212 (335)
Q Consensus       149 --~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~-~~~~~~  212 (335)
                        ......+|+||||++| +|.+++....  ...+++..++.++.||+.||.|||++++            +. ....+.
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  164 (284)
T 2a19_B           87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG  164 (284)
T ss_dssp             --CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC
T ss_pred             ccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC
Confidence              0234568999999996 9999998643  4679999999999999999999999980            00 000011


Q ss_pred             hcCCCCH------HHhhhhCCCCCCCCC-----CCCCCCcc---------------------------ccccccCCChHH
Q 019844          213 VLGTPTR------EEIKCMNPNYTEFKF-----PQIKPHPW---------------------------HKVFQKRLPPEA  254 (335)
Q Consensus       213 ~~g~~~~------~~~~~~~~~~~~~~~-----~~~~~~~~---------------------------~~~~~~~~s~~~  254 (335)
                      .+|....      .....+.+.|.+.+.     .....+.|                           ...++..+++++
T Consensus       165 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (284)
T 2a19_B          165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDKKE  244 (284)
T ss_dssp             CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTSCHHH
T ss_pred             cchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccCCHHH
Confidence            1111000      000001111111000     00000000                           012335678999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      .+||.+||+.||.+|||+.++++|.+.-.
T Consensus       245 ~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          245 KTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            99999999999999999999999988654

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.94  E-value=5.2e-26  Score=206.53  Aligned_cols=203  Identities=15%  Similarity=0.079  Sum_probs=125.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhC--CCCceeeece-------ee
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQML--DHPNIVALKH-------CF  144 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l--~hpnIv~~~~-------~~  144 (335)
                      ..+|.+++.||+|+||.||+|.++.+++.||||++....       ..+.+|+.+++.|  +||||++++.       ++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            445999999999999999999999999999999997532       3456775544444  6999888663       33


Q ss_pred             eeCCC------------CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHH------HHHHHHHHHHHHHHHhCC---
Q 019844          145 FSTTD------------KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYV------KLYTYQICRALAYIHNCI---  203 (335)
Q Consensus       145 ~~~~~------------~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~------~~i~~qi~~aL~yLH~~~---  203 (335)
                      .....            .....+|||||||+|+|.+++....   ..+.+...      ..++.||+.||+|||+++   
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivH  217 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVH  217 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCcc
Confidence            22111            0115589999999999999998743   23445555      577799999999999998   


Q ss_pred             ---------cCh--HHhHh-------------hhcCCCC---HHHhh-----------------------hhCCCCCCCC
Q 019844          204 ---------VDQ--LVEII-------------KVLGTPT---REEIK-----------------------CMNPNYTEFK  233 (335)
Q Consensus       204 ---------~~~--~~~~~-------------~~~g~~~---~~~~~-----------------------~~~~~~~~~~  233 (335)
                               ++.  ..++.             ...|++.   ++.+.                       .+.+.|....
T Consensus       218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  297 (371)
T 3q60_A          218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVT  297 (371)
T ss_dssp             TTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCC
T ss_pred             CcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcC
Confidence                     000  00000             1112211   22211                       1111111100


Q ss_pred             -----------CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          234 -----------FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       234 -----------~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                                 ........+....+..+++++.+||.+||+.||++|||+.++|+||||+++.+
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  361 (371)
T 3q60_A          298 PGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQN  361 (371)
T ss_dssp             TTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHH
T ss_pred             cccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHH
Confidence                       00000111112223578999999999999999999999999999999987643

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.94  E-value=1.4e-26  Score=206.13  Aligned_cols=196  Identities=20%  Similarity=0.269  Sum_probs=142.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----------hhHHHHHHHHHhCC--CCceeeeceeeeeCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------RYKNRELQIMQMLD--HPNIVALKHCFFSTT  148 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------~~~~~Ei~~l~~l~--hpnIv~~~~~~~~~~  148 (335)
                      ..+|++++.||+|+||.||+|.+..+++.||||++....          ..+.+|+.+++.+.  ||||+++++++    
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~----  117 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF----  117 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE----
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE----
Confidence            446999999999999999999999999999999996431          45678999999996  59999999999    


Q ss_pred             CCCccEEEEEeecch--hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC--hHHhHhh
Q 019844          149 DKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD--QLVEIIK  212 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~--g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~--~~~~~~~  212 (335)
                       .....+++|||++.  ++|.+++..    .+.+++..++.++.||+.||.|||+++            ++  .....+.
T Consensus       118 -~~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          118 -ERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             -ECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred             -ecCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence             45556899999997  599999886    567999999999999999999999998            11  1111111


Q ss_pred             hcC---------------CCC---HHHhhhhCCCCC------------------CCCCCCCCC-CccccccccCCChHHH
Q 019844          213 VLG---------------TPT---REEIKCMNPNYT------------------EFKFPQIKP-HPWHKVFQKRLPPEAV  255 (335)
Q Consensus       213 ~~g---------------~~~---~~~~~~~~~~~~------------------~~~~~~~~~-~~~~~~~~~~~s~~~~  255 (335)
                      .+|               ++.   ++.+... ..+.                  ...+..... ......++..+++++.
T Consensus       193 Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  271 (320)
T 3a99_A          193 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYH-RYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ  271 (320)
T ss_dssp             CCTTCEECCSSCBCCCCSCGGGSCHHHHHHS-CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHH
T ss_pred             eCccccccccccccCCCCCccCCChHHhccC-CCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHH
Confidence            122               111   1111100 0000                  000000000 0001123467899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +||.+||+.||++|||+.++++||||++...
T Consensus       272 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~  302 (320)
T 3a99_A          272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLL  302 (320)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence            9999999999999999999999999998754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.94  E-value=5.6e-27  Score=210.87  Aligned_cols=116  Identities=16%  Similarity=0.224  Sum_probs=99.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---------------------hhHHHHHHHHHhCCCCce
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---------------------RYKNRELQIMQMLDHPNI  137 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---------------------~~~~~Ei~~l~~l~hpnI  137 (335)
                      ...++|++++.||+|+||.||+|.+  +++.||||++....                     ..+.+|+.+++.++||||
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i  105 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC  105 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence            3445799999999999999999999  89999999986321                     567899999999999999


Q ss_pred             eeeceeeeeCCCCCccEEEEEeecchh-hHHHH------HHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          138 VALKHCFFSTTDKEELYLNLVLEYVPE-TVNRI------ARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       138 v~~~~~~~~~~~~~~~~~~iv~e~~~g-~L~~~------l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                      +++++++     .....+|+||||++| +|.++      +...  ....+++..++.++.||+.||.|||+ +|
T Consensus       106 ~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~~  172 (348)
T 2pml_X          106 LTCEGII-----TNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEKN  172 (348)
T ss_dssp             CCCSEEE-----ESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             ceEEEEE-----eeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            9999999     445569999999997 99887      4321  14679999999999999999999999 77

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.94  E-value=1.3e-26  Score=205.42  Aligned_cols=198  Identities=19%  Similarity=0.242  Sum_probs=134.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhC----CCCceeeeceee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQML----DHPNIVALKHCF  144 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l----~hpnIv~~~~~~  144 (335)
                      ...++|++.+.||+|+||.||+|.++.+++.||||++...          ...+.+|+.+++.+    +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            4456799999999999999999999999999999999643          23456899999999    899999999999


Q ss_pred             eeCCCCCccEEEEEeec-chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC--hHH
Q 019844          145 FSTTDKEELYLNLVLEY-VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD--QLV  208 (335)
Q Consensus       145 ~~~~~~~~~~~~iv~e~-~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~--~~~  208 (335)
                           .....+++|||+ +.| +|.+++..    .+.+++..++.++.||+.||.|||+++            ++  ...
T Consensus       108 -----~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          108 -----ETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             ----------CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTE
T ss_pred             -----ecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCe
Confidence                 445558899999 564 99999986    567999999999999999999999988            11  100


Q ss_pred             hHhhhcC---------------CCC---HHHhhhhCCCCC------------------CCCCCCCCC-CccccccccCCC
Q 019844          209 EIIKVLG---------------TPT---REEIKCMNPNYT------------------EFKFPQIKP-HPWHKVFQKRLP  251 (335)
Q Consensus       209 ~~~~~~g---------------~~~---~~~~~~~~~~~~------------------~~~~~~~~~-~~~~~~~~~~~s  251 (335)
                      ..+..+|               ++.   ++.+.... .+.                  ...+..... ......++..++
T Consensus       179 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  257 (312)
T 2iwi_A          179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQ-YHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVS  257 (312)
T ss_dssp             EEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSC-BCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSC
T ss_pred             EEEEEcchhhhcccCcccccCCcccccCceeeecCC-CCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCC
Confidence            1111112               111   11110000 000                  000000000 000112346789


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      +++.+||.+||+.||++|||+.++|+||||+....
T Consensus       258 ~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          258 PDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            99999999999999999999999999999987644

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=2.8e-26  Score=201.74  Aligned_cols=116  Identities=23%  Similarity=0.269  Sum_probs=103.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...++|++++.||+|+||.||+|++..+++.||+|++...       .+.+.+|+.+++.++||||+++++++     ..
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~   82 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EE   82 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----EC
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----ee
Confidence            3456799999999999999999999999999999998432       14567999999999999999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|+||||++| +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus        83 ~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~  131 (294)
T 4eqm_A           83 DDCYYLVMEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDMR  131 (294)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            6679999999986 99999986    567999999999999999999999998

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.94  E-value=3.8e-26  Score=203.78  Aligned_cols=118  Identities=17%  Similarity=0.241  Sum_probs=98.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHH-HHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQ-IMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~-~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .++|++++.||+|+||.||+|.++.+++.||||++....     ..+.+|+. +++.++||||+++++++     .....
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~-----~~~~~   95 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL-----FREGD   95 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE-----ECSSE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEE-----EeCCc
Confidence            356999999999999999999999999999999996432     23445655 67778999999999999     44456


Q ss_pred             EEEEeecchhhHHHHHHHHhh-hcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          155 LNLVLEYVPETVNRIARNYSR-IHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      +|+||||++|+|.+++..... ....+++..++.++.|++.||.|||++ +
T Consensus        96 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~  146 (327)
T 3aln_A           96 CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK  146 (327)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC
Confidence            899999999998888875332 256799999999999999999999998 6

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=3.6e-26  Score=200.76  Aligned_cols=197  Identities=22%  Similarity=0.313  Sum_probs=137.0

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      |.....||+|+||.||+|.+..+++.||||.+...    ...+.+|+.+++.++||||+++++++     .....+++||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~   98 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF-----SENGFIKIFM   98 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEE-----EETTEEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEE-----EeCCcEEEEE
Confidence            33455999999999999999999999999998643    24577999999999999999999999     4555689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHhHhhh-----------
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVEIIKV-----------  213 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~~~~~-----------  213 (335)
                      ||++| +|.+++.... ....+++..++.++.||+.||.|||+++            ++.  ....+..           
T Consensus        99 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A           99 EQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             ECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             EeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            99985 9999997632 1235679999999999999999999998            100  0000011           


Q ss_pred             ------cCCCC---HHHhhhhCCCCCC------------------CCCCCCCC----------CccccccccCCChHHHH
Q 019844          214 ------LGTPT---REEIKCMNPNYTE------------------FKFPQIKP----------HPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       214 ------~g~~~---~~~~~~~~~~~~~------------------~~~~~~~~----------~~~~~~~~~~~s~~~~~  256 (335)
                            .|++.   ++.+......+..                  ..+.....          ......++..+++++.+
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA  257 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHH
T ss_pred             CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHH
Confidence                  11111   1211110000100                  00000000          00112344678999999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ||.+||+.||++|||+.++|+||||+....
T Consensus       258 li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          258 FILKCFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             HHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence            999999999999999999999999987543

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.94  E-value=1.4e-25  Score=196.46  Aligned_cols=185  Identities=12%  Similarity=0.001  Sum_probs=132.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++....       ..+.+|+.+++.++||||+++++++     ...
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~  103 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV-----HTR  103 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----EET
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE-----EEC
Confidence            3356999999999999999999999999999999996432       4577999999999999999999999     455


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ChHHh------------HhhhcCCCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-DQLVE------------IIKVLGTPT  218 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-~~~~~------------~~~~~g~~~  218 (335)
                      ..+|+||||++| +|.+++..     + ....++..|+.||+.||.|||++|+ +...+            .+...++..
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~-----~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~  177 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADT-----S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMP  177 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTT-----C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred             CcEEEEEEecCCCCHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence            669999999986 99999852     2 4666789999999999999999981 10000            000111111


Q ss_pred             ---------------HHHhhhhCCCCCCCCCC-------CCCCC--ccccccccCCChHHHHHHHHhccCCCCCCCCHHH
Q 019844          219 ---------------REEIKCMNPNYTEFKFP-------QIKPH--PWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALE  274 (335)
Q Consensus       219 ---------------~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~  274 (335)
                                     ++.+ .+...|......       .....  .....++..+++++.+||.+||+.||++| |+.+
T Consensus       178 ~~~~~~Di~slG~il~ell-tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~e  255 (286)
T 3uqc_A          178 DANPQDDIRGIGASLYALL-VNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SAST  255 (286)
T ss_dssp             TCCHHHHHHHHHHHHHHHH-HSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHH
T ss_pred             CCCchhHHHHHHHHHHHHH-HCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHH
Confidence                           1111 111222211100       00000  11112346789999999999999999999 9999


Q ss_pred             Hhc
Q 019844          275 ACV  277 (335)
Q Consensus       275 ~L~  277 (335)
                      +++
T Consensus       256 l~~  258 (286)
T 3uqc_A          256 LLN  258 (286)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            987

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=5.1e-26  Score=201.72  Aligned_cols=201  Identities=20%  Similarity=0.211  Sum_probs=140.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCC--CCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLD--HPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~--hpnIv~~~~~~~~~~~~  150 (335)
                      ....+|.+++.||+|+||.||+|.+. +++.||||++...      ...+.+|+.+++.++  ||||+++++++     .
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~-----~   98 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-----I   98 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE-----E
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe-----e
Confidence            34567999999999999999999985 5899999998532      245678999999996  59999999999     4


Q ss_pred             CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------ChHHhHh-------
Q 019844          151 EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQLVEII-------  211 (335)
Q Consensus       151 ~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~~~~~~-------  211 (335)
                      ...++|+|||++.++|.+++..    ...+++..++.++.||+.||.|||++++            +.....+       
T Consensus        99 ~~~~~~lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~  174 (313)
T 3cek_A           99 TDQYIYMVMECGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIAN  174 (313)
T ss_dssp             CSSEEEEEECCCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSC
T ss_pred             cCCEEEEEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccc
Confidence            5556999999777899999986    6679999999999999999999999980            0000000       


Q ss_pred             ------------hhcCCCC---HHHhhhhC---------CCCCC------------------CCCCCCCC----------
Q 019844          212 ------------KVLGTPT---REEIKCMN---------PNYTE------------------FKFPQIKP----------  239 (335)
Q Consensus       212 ------------~~~g~~~---~~~~~~~~---------~~~~~------------------~~~~~~~~----------  239 (335)
                                  ...|++.   ++.+....         ..+..                  ..+.....          
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  254 (313)
T 3cek_A          175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID  254 (313)
T ss_dssp             C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC
T ss_pred             cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh
Confidence                        1122222   12111100         00000                  00000000          


Q ss_pred             CccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCC
Q 019844          240 HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNT  289 (335)
Q Consensus       240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~  289 (335)
                      ......++...++++.+||.+||+.||.+|||+.++|+||||+....|..
T Consensus       255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~~~  304 (313)
T 3cek_A          255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN  304 (313)
T ss_dssp             TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-----
T ss_pred             cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCchh
Confidence            00111234556889999999999999999999999999999997655443

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=2.3e-25  Score=203.08  Aligned_cols=115  Identities=29%  Similarity=0.430  Sum_probs=98.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCC-CC-----ceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLD-HP-----NIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~-hp-----nIv~~~~~~~~~~~~  150 (335)
                      ..++|++.+.||+|+||.||+|.++.+++.||||++....   ..+.+|+.+++.++ |+     +|+++++++     .
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-----~  126 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF-----M  126 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE-----E
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee-----c
Confidence            3457999999999999999999999999999999997543   44567899988884 55     499999999     4


Q ss_pred             CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          151 EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       151 ~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      ...++|+||||++|+|.+++....  ...+++..++.++.||+.||.|||+
T Consensus       127 ~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~  175 (382)
T 2vx3_A          127 FRNHLCLVFEMLSYNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLAT  175 (382)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             cCCceEEEEecCCCCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            456699999999999999998633  3569999999999999999999995

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.93  E-value=3.6e-26  Score=203.29  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=103.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...+|++.+.||+|+||.||+|.++.+++.||||++...     ...+.+|+.+++.++||||+++++++..   ....+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~   83 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRH   83 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCC
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCce
Confidence            456799999999999999999999999999999999642     2456799999999999999999999843   23345


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+||||++| +|.+++..... ...+++..++.++.||+.||.|||+++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~  132 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG  132 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999985 99999986432 234999999999999999999999998

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.93  E-value=2.5e-25  Score=196.98  Aligned_cols=115  Identities=26%  Similarity=0.504  Sum_probs=102.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|.+++.||+|+||.||+|.+..+++.||+|++...    ...+.+|+.+++.++||||+++++++     .....++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~   83 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL-----YKDKRLN   83 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEE-----ecCCeeE
Confidence            45799999999999999999999999999999988542    34577999999999999999999999     4455689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        84 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~  128 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMN  128 (310)
T ss_dssp             EEEECCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 999999863   456999999999999999999999998

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=7.5e-26  Score=200.84  Aligned_cols=116  Identities=19%  Similarity=0.274  Sum_probs=89.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++++.||+|+||.||+|.++.+|+.||||++....      ..+..+..+++.++||||+++++++     ....
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~-----~~~~   97 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF-----ITNT   97 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE-----ecCC
Confidence            3457999999999999999999999999999999996432      2233445567888999999999999     4455


Q ss_pred             EEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          154 YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       154 ~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      .+|+||||+++.+..+....   ...+++..++.++.||+.||.|||++ +
T Consensus        98 ~~~lv~e~~~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~  145 (318)
T 2dyl_A           98 DVFIAMELMGTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKHG  145 (318)
T ss_dssp             EEEEEECCCSEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cEEEEEeccCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhCC
Confidence            68999999976666665532   46799999999999999999999985 6

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=2.6e-26  Score=212.33  Aligned_cols=114  Identities=20%  Similarity=0.303  Sum_probs=95.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ..+|.+.+.||+|+||+|+. ....+++.||||++... .....+|+.+|+.+ +|||||++++++     .+..++|||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~-----~~~~~~~lv   96 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTE-----KDRQFQYIA   96 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEE-----EETTEEEEE
T ss_pred             cEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCEEEEE
Confidence            34699999999999999764 33468999999999653 34577999999999 799999999998     566679999


Q ss_pred             eecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+|+|.+++...   ...+.+..++.++.||+.||.|||+++
T Consensus        97 ~E~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  138 (432)
T 3p23_A           97 IELCAATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSLN  138 (432)
T ss_dssp             EECCSEEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHTT
T ss_pred             EECCCCCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHCc
Confidence            999999999998752   334666678899999999999999998

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=2e-25  Score=199.66  Aligned_cols=117  Identities=21%  Similarity=0.357  Sum_probs=99.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEE-cCCCcEEEEEEecccc---hhHHHHHHHHHhCCCC------ceeeeceeeeeCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKC-RETGEIVAIKKVLQDK---RYKNRELQIMQMLDHP------NIVALKHCFFSTTD  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~-~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hp------nIv~~~~~~~~~~~  149 (335)
                      ..++|++.+.||+|+||.||+|.+ +.+++.||||++....   ..+.+|+.+++.++|+      +|+++++++     
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~-----   86 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF-----   86 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE-----
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc-----
Confidence            345799999999999999999998 5688999999997532   4577899999998665      499999999     


Q ss_pred             CCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....++|+||||++++|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        87 ~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~  138 (339)
T 1z57_A           87 EHHGHICIVFELLGLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSNK  138 (339)
T ss_dssp             EETTEEEEEEECCCCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCcEEEEEcCCCCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            5556799999999779999988632  346899999999999999999999998

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=1.9e-25  Score=193.67  Aligned_cols=115  Identities=21%  Similarity=0.323  Sum_probs=100.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|++...   .+.+.+|+.+++.++||||+++++++     .....+|
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~   81 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPIC   81 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSEE
T ss_pred             ChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCceE
Confidence            3457999999999999999999986 5778999999753   35678999999999999999999999     4555589


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~  126 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC  126 (269)
T ss_dssp             EEEECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999986 999998652   456999999999999999999999998

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.93  E-value=1.8e-25  Score=195.71  Aligned_cols=118  Identities=20%  Similarity=0.350  Sum_probs=104.3

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ....+|++.+.||+|+||.||+|.++.++..||+|++..+.   ..+.+|+.+++.++||||+++++++     .....+
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   84 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPF   84 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSE
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCE
Confidence            45567999999999999999999999999999999997543   4577999999999999999999999     555558


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN  131 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence            999999995 9999998633  456999999999999999999999988

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.93  E-value=1.2e-25  Score=199.10  Aligned_cols=116  Identities=26%  Similarity=0.419  Sum_probs=98.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ...+|++.+.||+|+||.||+|++  ++..||||++....      ..+.+|+.+++.++||||+++++++     ....
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~  107 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQPP  107 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSTT
T ss_pred             ChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECC
Confidence            345799999999999999999987  58899999986432      3567899999999999999999999     5555


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++| +|.+++..... ...+++..++.++.||+.||.|||+++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRN  157 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            58899999986 99999975221 224999999999999999999999987

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.93  E-value=5.5e-26  Score=206.04  Aligned_cols=120  Identities=17%  Similarity=0.179  Sum_probs=99.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEE-----EcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAK-----CRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ....+|++++.||+|+||.||+|+     +..+++.||||++...     ...+.+|+.+++.++|||||++++++    
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~----  143 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS----  143 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE----
Confidence            344679999999999999999999     4457789999998642     23567899999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhh---hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSR---IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ......|+|||||+| +|.+++.....   ....+++..++.++.||+.||.|||+++
T Consensus       144 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  201 (367)
T 3l9p_A          144 -LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH  201 (367)
T ss_dssp             -CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence             444557899999986 99999987431   1245999999999999999999999998

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.93  E-value=1.3e-25  Score=204.40  Aligned_cols=117  Identities=21%  Similarity=0.319  Sum_probs=102.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ...++|.+.+.||+|+||.||+|.++.+++.||||++...     ...+.+|+.+|+.++|||||++++++     ....
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~~  185 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC-----TQKQ  185 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE-----CSSS
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----ecCC
Confidence            3456799999999999999999999999999999998643     24577999999999999999999999     4445


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+|||||+| +|.+++...   ...+++..+..++.||+.||+|||+++
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~  233 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKC  233 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            58899999985 999999753   345999999999999999999999998

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.93  E-value=1.8e-25  Score=199.39  Aligned_cols=117  Identities=22%  Similarity=0.328  Sum_probs=101.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ....+|.+.+.||+|+||.||+|.++.+++   .||||++...     .+.+.+|+.+++.++||||+++++++     .
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~  120 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----T  120 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----E
Confidence            345679999999999999999999986655   4999999643     24577899999999999999999999     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+|+||||++| +|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~  171 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDLG  171 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            56668999999986 999998642   357999999999999999999999998

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=5.9e-25  Score=195.13  Aligned_cols=122  Identities=20%  Similarity=0.277  Sum_probs=104.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|++.+.||+|+||.||+|.++.+++.||||++...    ...+.+|+.+++.++||||+++++++.... .....+|
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~  106 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAW  106 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeE
Confidence            45799999999999999999999999999999998532    345779999999999999999999985322 2455688


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.+ +|.+++.........+++..++.++.||+.||.|||+++
T Consensus       107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  154 (317)
T 2buj_A          107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG  154 (317)
T ss_dssp             EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 999999876555678999999999999999999999998

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.93  E-value=3e-25  Score=201.42  Aligned_cols=120  Identities=23%  Similarity=0.346  Sum_probs=100.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-------CCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-------ETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFF  145 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~  145 (335)
                      ...++|.+++.||+|+||.||+|++.       .++..||||++....     ..+.+|+.+|+.+ +||||+++++++ 
T Consensus        78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~-  156 (370)
T 2psq_A           78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-  156 (370)
T ss_dssp             CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE-
T ss_pred             ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-
Confidence            34567999999999999999999975       345679999996432     4577999999999 899999999999 


Q ss_pred             eCCCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          146 STTDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                          .....+|+||||++| +|.+++.....            ....+++..++.++.||+.||.|||+++
T Consensus       157 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  223 (370)
T 2psq_A          157 ----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  223 (370)
T ss_dssp             ----CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                445558899999996 99999986321            1235899999999999999999999998

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.93  E-value=3.9e-25  Score=196.86  Aligned_cols=125  Identities=18%  Similarity=0.260  Sum_probs=93.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ...++|.+++.||+|+||.||+|.++.++.   .||||++...      ...+.+|+.+++.++||||+++++++.....
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence            344579999999999999999999987765   8999998643      2457799999999999999999999964332


Q ss_pred             C-CccEEEEEeecchh-hHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 K-EELYLNLVLEYVPE-TVNRIARNYSR--IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~-~~~~~~iv~e~~~g-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      . .....++||||+.| +|.+++.....  ....+++..++.|+.||+.||.|||+++
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  157 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN  157 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC
Confidence            1 11224899999996 99999976431  1225999999999999999999999998

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.93  E-value=6e-25  Score=194.52  Aligned_cols=119  Identities=29%  Similarity=0.483  Sum_probs=103.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+|++.+.||+|+||.||+|.+..+|+.||||++...       ...+.+|+.+++.++||||+++++++.     ..
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~  104 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----ED  104 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ET
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----cC
Confidence            345699999999999999999999999999999998641       245678999999999999999999994     44


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++||||++| +|.+++.........+++..++.++.||+.||.|||+++
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR  156 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            568999999996 999999876655677999999999999999999999998

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.93  E-value=3.6e-25  Score=199.29  Aligned_cols=116  Identities=21%  Similarity=0.362  Sum_probs=98.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC-cEEEEEEeccc---chhHHHHHHHHHhCCCCc------eeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG-EIVAIKKVLQD---KRYKNRELQIMQMLDHPN------IVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpn------Iv~~~~~~~~~~~~  150 (335)
                      .++|++.+.||+|+||.||+|.+..++ +.||+|++...   ...+.+|+.+++.++|++      |+.+++++     .
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~-----~   92 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF-----N   92 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE-----E
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee-----e
Confidence            457999999999999999999998777 68999999753   345678999999997665      89999988     5


Q ss_pred             CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...++|+||||++++|.+.+....  ...+++..++.++.||+.||.|||+++
T Consensus        93 ~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~  143 (355)
T 2eu9_A           93 FHGHMCIAFELLGKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHENQ  143 (355)
T ss_dssp             ETTEEEEEEECCCCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             eCCeEEEEEeccCCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            556799999999888888777532  356999999999999999999999998

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.93  E-value=1.2e-25  Score=197.51  Aligned_cols=118  Identities=31%  Similarity=0.501  Sum_probs=101.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEE----EcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAK----CRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|++++.||+|+||.||+|+    +..+++.||||++....    +.+.+|+.+++.++||||+++++++..   .+
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~   84 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AG   84 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH---HH
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence            44579999999999999999999    56789999999996533    457799999999999999999999843   22


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++++||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  134 (295)
T 3ugc_A           85 RRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR  134 (295)
T ss_dssp             HTSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence            3447899999986 999999863   235999999999999999999999998

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.93  E-value=7.8e-25  Score=193.81  Aligned_cols=114  Identities=20%  Similarity=0.213  Sum_probs=101.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....       ..+.+|+.+++.++||||+++++++     ....
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG-----EIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE-----eeCC
Confidence            456999999999999999999999999999999986431       4567899999999999999999999     4455


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++| +|.+++..    .+.+++..++.++.||+.||.|||+++
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~  154 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAAG  154 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence            68999999996 99999986    567999999999999999999999998

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=2.7e-25  Score=209.19  Aligned_cols=118  Identities=20%  Similarity=0.345  Sum_probs=103.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ....+|.+.+.||+|+||.||+|.++.++..||||++...   ...+.+|+.+|+.++|||||++++++     .....+
T Consensus       217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-----~~~~~~  291 (495)
T 1opk_A          217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPF  291 (495)
T ss_dssp             CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSC
T ss_pred             cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCCcE
Confidence            3456799999999999999999999999999999999753   35678999999999999999999999     444558


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||||+| +|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~  338 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN  338 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999995 9999998633  356899999999999999999999998

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.92  E-value=2.3e-25  Score=201.17  Aligned_cols=120  Identities=20%  Similarity=0.281  Sum_probs=99.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEE-----EcCCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAK-----CRETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      ..++|.+++.||+|+||.||+|+     +..+++.||||++....     +.+.+|+.+++.+ +|||||++++++..  
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~--   97 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--   97 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeec--
Confidence            34679999999999999999999     55677899999996532     4578999999999 79999999999843  


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhh---------------------------------------------------
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRI---------------------------------------------------  176 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~---------------------------------------------------  176 (335)
                        ....+++|||||+| +|.+++......                                                   
T Consensus        98 --~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (359)
T 3vhe_A           98 --PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD  175 (359)
T ss_dssp             --TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred             --CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence              23347899999996 999999863210                                                   


Q ss_pred             -----------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          177 -----------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       177 -----------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                                 ...+++..++.|+.||+.||.|||+++
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~  213 (359)
T 3vhe_A          176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  213 (359)
T ss_dssp             --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC
Confidence                       112899999999999999999999998

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.92  E-value=1.5e-25  Score=196.26  Aligned_cols=116  Identities=17%  Similarity=0.216  Sum_probs=100.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCC-------cEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETG-------EIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ..++|.+.+.||+|+||.||+|.++.++       ..||+|++....    ..+.+|+.+++.++||||+++++++    
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----   81 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC----   81 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE----
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE----
Confidence            3457999999999999999999998877       469999986432    4577999999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ......|+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        82 -~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~  133 (289)
T 4fvq_A           82 -VCGDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEENT  133 (289)
T ss_dssp             -CCTTCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -EeCCCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             444557899999995 999999863   234999999999999999999999998

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.92  E-value=4.8e-25  Score=192.55  Aligned_cols=116  Identities=22%  Similarity=0.281  Sum_probs=98.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|++++.||+|+||.||+|.+. ++..||+|++...   ...+.+|+.+++.++||||+++++++     .....+
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~   94 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPI   94 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSE
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCe
Confidence            44567999999999999999999885 6778999999743   35678999999999999999999999     555568


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        95 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  140 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ  140 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999985 999998753   356999999999999999999999998

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.92  E-value=3.7e-25  Score=191.71  Aligned_cols=115  Identities=22%  Similarity=0.325  Sum_probs=100.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|++.+.||+|+||.||+|.++ ++..||+|++...   ...+.+|+.+++.++||||+++++++     .....+|
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~   79 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPIY   79 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCceE
Confidence            3457999999999999999999885 6778999999653   35678999999999999999999999     5555689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        80 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  124 (268)
T 3sxs_A           80 IVTEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESHQ  124 (268)
T ss_dssp             EEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999986 999999763   345999999999999999999999998

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.92  E-value=5.1e-25  Score=195.14  Aligned_cols=120  Identities=18%  Similarity=0.335  Sum_probs=100.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ....+|.+.+.||+|+||.||+|.+.     .+++.||||++....     +.+.+|+.+++.++||||+++++++    
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----   95 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC----   95 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE----
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE----
Confidence            34567999999999999999999983     456899999996432     4567899999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhh--------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSR--------------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~--------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||++| +|.+++.....                    ....+++..++.++.||+.||.|||+++
T Consensus        96 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  170 (314)
T 2ivs_A           96 -SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK  170 (314)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence             445558899999995 99999987432                    1234899999999999999999999998

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.92  E-value=2.4e-24  Score=192.48  Aligned_cols=122  Identities=22%  Similarity=0.315  Sum_probs=104.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCC-CCceeeeceeeeeCCC---CCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLD-HPNIVALKHCFFSTTD---KEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~---~~~  152 (335)
                      ..+|++.++||+|+||.||+|++..+++.||||++...    ...+.+|+.+++.+. ||||+++++++.....   ...
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            34799999999999999999999999999999998543    245678999999995 9999999999854322   455


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++||||+.|+|.+++..... .+.+++..++.|+.||+.||.|||+++
T Consensus       107 ~~~~lv~e~~~g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (337)
T 3ll6_A          107 AEFLLLTELCKGQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQK  156 (337)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ceEEEEEEecCCCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            66899999999999998876432 456999999999999999999999886

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.92  E-value=2.6e-24  Score=200.17  Aligned_cols=117  Identities=23%  Similarity=0.330  Sum_probs=100.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ....+|++.+.||+|+||.||+|.+.  ++.||||+++..  .+.+.+|+.+|+.++|||||++++++..    ....+|
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~~  263 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY  263 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TTSCEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEc----CCCceE
Confidence            34567999999999999999999985  789999999753  3567899999999999999999999853    223488


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||||+| +|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus       264 iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~  309 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNN  309 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999986 9999998632  334799999999999999999999998

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.92  E-value=5.6e-25  Score=197.35  Aligned_cols=119  Identities=25%  Similarity=0.321  Sum_probs=101.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ..++|++++.||+|+||.||+|++.     .+++.||||++....     ..+.+|+.+++.++||||+++++++     
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----  119 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC-----  119 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-----
Confidence            3456999999999999999999997     455899999997532     4577999999999999999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhh--------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRI--------------------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~--------------------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....+|+||||++| +|.+++......                    ...+++.+++.|+.||+.||.|||+++
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~  194 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  194 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            445558899999996 999999863211                    157999999999999999999999998

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.92  E-value=6.9e-25  Score=195.64  Aligned_cols=120  Identities=16%  Similarity=0.174  Sum_probs=96.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEE-----EcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAK-----CRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~-----~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ....+|++++.||+|+||.||+|+     +..+++.||||++...     ...+.+|+.+++.++||||+++++++    
T Consensus        27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~----  102 (327)
T 2yfx_A           27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS----  102 (327)
T ss_dssp             CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEE----
Confidence            344579999999999999999999     5567889999998532     24567899999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhh---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRI---HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||++| +|.+++......   ...+++..++.++.||+.||.|||+++
T Consensus       103 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~  160 (327)
T 2yfx_A          103 -LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH  160 (327)
T ss_dssp             -CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence             444557899999975 999999874211   145899999999999999999999998

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.92  E-value=4.5e-25  Score=191.19  Aligned_cols=117  Identities=13%  Similarity=0.214  Sum_probs=98.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|.+.+.||+|+||.||+|++.  ++.||||++...      .+.+.+|+.+++.++||||+++++++...   ...
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~   82 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAP   82 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSS
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCC
Confidence            3456999999999999999999985  889999998643      24577999999999999999999998432   225


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++||||++| +|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (271)
T 3kmu_A           83 HPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTLE  131 (271)
T ss_dssp             SCEEEEECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             CeEeeecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            58899999996 9999997522  235899999999999999999999976

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.92  E-value=5.1e-25  Score=204.06  Aligned_cols=118  Identities=21%  Similarity=0.248  Sum_probs=92.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..+.|.+.+.||+|+||+||.+. ..+|+.||||++..+. ..+.+|+.+|+.+ +|||||++++++     ....++||
T Consensus        13 l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~l   86 (434)
T 2rio_A           13 LKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLYI   86 (434)
T ss_dssp             CSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEE
T ss_pred             hhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEEE
Confidence            33458888999999999998754 4689999999986543 4567999999876 899999999998     55667999


Q ss_pred             EeecchhhHHHHHHHHhhhcC---CCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQ---RMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||+|+|.+++........   ..++..++.++.||+.||+|||+++
T Consensus        87 v~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  135 (434)
T 2rio_A           87 ALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK  135 (434)
T ss_dssp             EECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC
Confidence            999999999999975321111   1133456789999999999999998

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.92  E-value=2.1e-24  Score=188.83  Aligned_cols=114  Identities=25%  Similarity=0.356  Sum_probs=98.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----------hhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----------RYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++....           +.+.+|+.+++.++||||+++++++    
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~----   92 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLM----   92 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEE----
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheee----
Confidence            3457999999999999999999999999999999985321           4577999999999999999999998    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ....  ++||||++| +|.+.+...   ...+++..++.++.||+.||.|||+++
T Consensus        93 -~~~~--~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~  142 (287)
T 4f0f_A           93 -HNPP--RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQN  142 (287)
T ss_dssp             -TTTT--EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             -cCCC--eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence             4443  489999995 998887642   457999999999999999999999987

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.5e-24  Score=194.81  Aligned_cols=119  Identities=21%  Similarity=0.287  Sum_probs=98.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      ..++|.+++.||+|+||.||+|.+.     .++..||||++...     ...+.+|+.+++.+ +||||+++++++    
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~----  118 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC----  118 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence            3457999999999999999999973     45678999998642     34578999999999 899999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhh-------------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRI-------------------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~-------------------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||++| +|.+++......                   ...+++..++.++.||+.||.|||+++
T Consensus       119 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  192 (344)
T 1rjb_A          119 -TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS  192 (344)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             444558899999986 999999753210                   134899999999999999999999998

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.92  E-value=1.3e-24  Score=192.35  Aligned_cols=119  Identities=20%  Similarity=0.270  Sum_probs=100.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEE-----cCCCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKC-----RETGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      ..++|.+.+.||+|+||.||+|.+     ..+++.||||++...     ...+.+|+.+++.+ +||||+++++++    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~----   96 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC----   96 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEE----
Confidence            345799999999999999999985     457789999999643     24577999999999 999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhh--------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSR--------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~--------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+++||||++| +|.+++.....              ....+++..++.++.||+.||.|||+++
T Consensus        97 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  165 (313)
T 1t46_A           97 -TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (313)
T ss_dssp             -CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             444558899999986 99999986321              1125899999999999999999999998

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=1.1e-24  Score=194.41  Aligned_cols=119  Identities=25%  Similarity=0.426  Sum_probs=101.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEE--EEEEecc-----cchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIV--AIKKVLQ-----DKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v--AvK~i~~-----~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..++|++.+.||+|+||.||+|+++.++..+  |+|.+..     ....+.+|+.+++.+ +||||+++++++     ..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-----~~   97 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EH   97 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EE
T ss_pred             cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee-----ee
Confidence            3457999999999999999999999888865  9998864     235578999999999 899999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHh------------hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYS------------RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++|+||||++| +|.+++....            .....+++..++.++.||+.||.|||+++
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  162 (327)
T 1fvr_A           98 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ  162 (327)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            5669999999986 9999997532            11246999999999999999999999998

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.92  E-value=8.6e-25  Score=194.47  Aligned_cols=120  Identities=18%  Similarity=0.228  Sum_probs=101.4

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTT  148 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~  148 (335)
                      ...++|++.+.||+|+||.||+|.++     .+++.||||.+....     ..+.+|+.+++.++||||+++++++    
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~----   97 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----   97 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE----
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE----
Confidence            44567999999999999999999986     467889999996432     3467899999999999999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhh------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRI------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||++| +|.+++......      ...+++..++.++.||+.||.|||+++
T Consensus        98 -~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  158 (322)
T 1p4o_A           98 -SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  158 (322)
T ss_dssp             -CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence             445558899999986 999999864321      145799999999999999999999998

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.92  E-value=2e-24  Score=196.86  Aligned_cols=120  Identities=20%  Similarity=0.308  Sum_probs=100.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCC-------CcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRET-------GEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFF  145 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~  145 (335)
                      ...++|.+++.||+|+||.||+|.+..+       +..||||++....     ..+.+|+.+++.+ +|||||++++++ 
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~-  144 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC-  144 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee-
Confidence            4456799999999999999999997543       3579999996432     4577999999999 999999999999 


Q ss_pred             eCCCCCccEEEEEeecchh-hHHHHHHHHhhh------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          146 STTDKEELYLNLVLEYVPE-TVNRIARNYSRI------------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                          .....+|+||||++| +|.+++......            ...+++..++.|+.||+.||.|||+++
T Consensus       145 ----~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  211 (382)
T 3tt0_A          145 ----TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  211 (382)
T ss_dssp             ----CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence                445558899999986 999999873210            135999999999999999999999998

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.92  E-value=3.4e-26  Score=219.22  Aligned_cols=122  Identities=25%  Similarity=0.328  Sum_probs=99.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~  154 (335)
                      .++|++.+.||+|+||.||+|.++.+|+.||||++...     ...+.+|+.+++.++||||+++++++..... .....
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            35799999999999999999999999999999998643     2457789999999999999999998743111 12455


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .|+|||||+| +|.+++.... ....+++..++.|+.||+.||.|||++|
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~g  141 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHENR  141 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7899999985 9999987532 1236999999999999999999999998

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.92  E-value=2.4e-24  Score=186.38  Aligned_cols=114  Identities=21%  Similarity=0.313  Sum_probs=100.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++...   ...+.+|+.+++.++||||+++++++     .....+|+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l   80 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAPICL   80 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSCEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCCeEE
Confidence            356999999999999999999985 6788999999753   35678999999999999999999999     44455889


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        81 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  124 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC  124 (267)
T ss_dssp             EECCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEeCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999986 999998762   356899999999999999999999998

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=2.8e-24  Score=187.17  Aligned_cols=117  Identities=23%  Similarity=0.330  Sum_probs=98.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...++|++.+.||+|+||.||+|.+.  |+.||||++...  .+.+.+|+.+++.++||||+++++++..    ....+|
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~~~   91 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY   91 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCE
T ss_pred             CChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEc----CCCceE
Confidence            34467999999999999999999874  889999999753  3567899999999999999999998742    233578


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~  137 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNN  137 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999996 9999998643  234899999999999999999999998

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.92  E-value=3.1e-24  Score=191.86  Aligned_cols=119  Identities=24%  Similarity=0.293  Sum_probs=101.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCc-----EEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGE-----IVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTT  148 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~  148 (335)
                      ..++|.+.+.||+|+||.||+|.+..+++     .||+|.+...     ...+.+|+.+++.+ +||||+++++++    
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~----  119 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC----  119 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE----
Confidence            34579999999999999999999977664     7999998643     24577999999999 899999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhh----------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRI----------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~----------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .....+|+||||++| +|.+++......          ...+++..++.++.||+.||.|||+++
T Consensus       120 -~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  184 (333)
T 2i1m_A          120 -THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN  184 (333)
T ss_dssp             -CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence             444558899999986 999999864321          346899999999999999999999998

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.91  E-value=3.5e-24  Score=189.84  Aligned_cols=124  Identities=19%  Similarity=0.261  Sum_probs=97.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcC---CCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...+|.+++.||+|+||.||+|.+..   ++..||+|++...      ...+.+|+.+++.++||||+++++++......
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  111 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ  111 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence            34569999999999999999998865   5568999998643      14477899999999999999999999654433


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHh--hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYS--RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~--~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+++||||+.+ +|.+++....  .....+++..++.++.||+.||.|||+++
T Consensus       112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (313)
T 3brb_A          112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN  167 (313)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            33457899999996 9999986432  12456999999999999999999999998

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.91  E-value=4.6e-25  Score=196.62  Aligned_cols=117  Identities=21%  Similarity=0.373  Sum_probs=100.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|.+.+.||+|+||.||+|.+ .+++.||||++....     ..+.+|+.+++.++||||+++++++     .....
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~~~  101 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC-----MTPTE  101 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE-----CCSSC
T ss_pred             HhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE-----ecCCc
Confidence            345699999999999999999986 478999999986432     3578999999999999999999999     44455


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      .++|||||+| +|.+++.........+++..++.|+.||+.||.|||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  150 (326)
T 3uim_A          102 RLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH  150 (326)
T ss_dssp             CEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             eEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            7899999996 99999986544445699999999999999999999999

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.91  E-value=2.6e-24  Score=186.63  Aligned_cols=110  Identities=32%  Similarity=0.534  Sum_probs=94.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|++.+.||+|+||.||+|.+.  ++.||||++...        .+.+.+|+.+++.++||||+++++++     ....
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~   79 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC-----LKEP   79 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCC-
T ss_pred             hheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ecCC
Confidence            46999999999999999999984  889999998632        24567899999999999999999999     5555


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+||||++| +|.+++.     .+.+++..++.++.||+.||.|||+++
T Consensus        80 ~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~  125 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEA  125 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             ceEEEEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            68999999986 9988875     467999999999999999999999976

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.91  E-value=1.5e-24  Score=193.39  Aligned_cols=119  Identities=26%  Similarity=0.422  Sum_probs=102.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEE----EcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAK----CRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...++|++++.||+|+||.||+|+    +..+++.||||++....    +.+.+|+.+++.++||||+++++++..   .
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~   96 (327)
T 3lxl_A           20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---P   96 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---S
T ss_pred             hchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---C
Confidence            345679999999999999999999    56789999999996532    447899999999999999999998853   3


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +...+|+||||++| +|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~  147 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSRR  147 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45568899999975 999999863   345999999999999999999999998

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.91  E-value=1.4e-24  Score=191.34  Aligned_cols=117  Identities=25%  Similarity=0.370  Sum_probs=99.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEE----EcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAK----CRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|++++.||+|+||.||+|+    +..+++.||+|++...     ...+.+|+.+++.++||||+++++++...   .
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~   96 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---G   96 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---C
Confidence            3459999999999999999999    5678999999999643     25578999999999999999999998532   2


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        97 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  146 (302)
T 4e5w_A           97 GNGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSRQ  146 (302)
T ss_dssp             -CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            2458899999986 999999653   456999999999999999999999998

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.91  E-value=2.3e-24  Score=192.81  Aligned_cols=120  Identities=23%  Similarity=0.349  Sum_probs=98.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEc-------CCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeee
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCR-------ETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFF  145 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~-------~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~  145 (335)
                      ...++|++++.||+|+||.||+|.+.       .++..||||++....     ..+.+|+.+++.+ +||||+++++++ 
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~-  110 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC-  110 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE-
Confidence            34467999999999999999999986       457789999996432     4567999999999 899999999999 


Q ss_pred             eCCCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          146 STTDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       146 ~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                          .....+|+||||++| +|.+++.....            ....+++..++.++.||+.||.|||+++
T Consensus       111 ----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  177 (334)
T 2pvf_A          111 ----TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK  177 (334)
T ss_dssp             ----CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ----ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence                445568899999986 99999985321            1234899999999999999999999998

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.91  E-value=4.6e-25  Score=196.30  Aligned_cols=118  Identities=19%  Similarity=0.293  Sum_probs=100.0

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..++|.+.+.||+|+||.||+|.+ .+++.||||++...    ...+.+|+.+++.++||||+++++++     .....+
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~  110 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC-----DERNEM  110 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC-----CCTTCC
T ss_pred             HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeE
Confidence            345699999999999999999997 47899999998643    24577999999999999999999999     455568


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++.........+++..++.++.||+.||.|||+++
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  159 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA  159 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC
Confidence            899999986 998888643222345999999999999999999999988

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.91  E-value=9.2e-24  Score=184.26  Aligned_cols=116  Identities=26%  Similarity=0.311  Sum_probs=98.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCC---CcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ....+|++.+.||+|+||.||+|.+..+   +..||+|.+...     ...+.+|+.+++.++||||+++++++.     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----   86 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-----   86 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-----
Confidence            4456799999999999999999998654   457999998642     245778999999999999999999972     


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      + ..+|+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        87 ~-~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  136 (281)
T 1mp8_A           87 E-NPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKR  136 (281)
T ss_dssp             S-SSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c-CccEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            2 236799999996 999999752   346999999999999999999999998

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.91  E-value=1.6e-24  Score=196.86  Aligned_cols=116  Identities=24%  Similarity=0.361  Sum_probs=99.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEc---CCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~---~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|.+.+.||+|+||.||+|+++   .++..||||++...     .+.+.+|+.+++.++||||+++++++     ..
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~  117 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV-----TK  117 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CS
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----ee
Confidence            3456999999999999999999987   46778999998643     24577999999999999999999999     44


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+|+|||||+| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDMG  167 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            5558899999985 999999752   346999999999999999999999998

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.91  E-value=8.4e-24  Score=185.46  Aligned_cols=113  Identities=21%  Similarity=0.272  Sum_probs=96.9

Q ss_pred             eeeeEEee-eeeccCceEEEEEEE--cCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEH-VVGTGSFGVVFQAKC--RETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~-~lG~G~fg~V~~~~~--~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|.+.+ .||+|+||.||+|.+  ..+++.||||++...      ...+.+|+.+++.++||||+++++++ .    .
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~----~   89 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E----A   89 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E----S
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C----C
Confidence            35699998 999999999999954  567889999999643      24577999999999999999999998 2    1


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ..+|+||||++| +|.+++..    ...+++..++.++.||+.||.|||+++
T Consensus        90 -~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~  137 (291)
T 1xbb_A           90 -ESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN  137 (291)
T ss_dssp             -SSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CCcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             227799999995 99999986    567999999999999999999999998

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.91  E-value=2.9e-24  Score=190.46  Aligned_cols=119  Identities=20%  Similarity=0.293  Sum_probs=98.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEE-----cCCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKC-----RETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~-----~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|++++.||+|+||.||+|.+     ..+++.||||++....     ..+.+|+.+++.+ +||||+++++++..   
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~---  102 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---  102 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC---
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec---
Confidence            45799999999999999999985     3567899999996532     3567999999999 79999999999842   


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhh------------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRI------------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ....+|+|||||+| +|.+++......            ...+++..++.++.||+.||.|||+++
T Consensus       103 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  168 (316)
T 2xir_A          103 -PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  168 (316)
T ss_dssp             -TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence             23347899999996 999999863211            122899999999999999999999998

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.91  E-value=1.6e-23  Score=184.27  Aligned_cols=117  Identities=20%  Similarity=0.268  Sum_probs=96.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCC---cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETG---EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|++.+.||+|+||.||+|.+..++   ..+|+|.+...     ...+.+|+.+++.++||||+++++++.    ..
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~   98 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RS   98 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CS
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE----cC
Confidence            3456999999999999999999975433   36899998642     245679999999999999999999864    33


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....|+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~~  148 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASKK  148 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3457899999997 999998742   456899999999999999999999998

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.91  E-value=4.2e-24  Score=199.06  Aligned_cols=117  Identities=21%  Similarity=0.296  Sum_probs=99.9

Q ss_pred             ccceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           78 SKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        78 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ....++|.+.+.||+|+||.||+|.+. .+..||||+++..   .+.+.+|+.+|+.++|||||++++++.      ...
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~  256 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEP  256 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred             eechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCc
Confidence            345568999999999999999999985 5778999999753   356789999999999999999999983      223


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||||||.+ +|.+++....  ...+++..+..++.||+.||.|||+++
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~  304 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRN  304 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            7899999985 9999997533  346899999999999999999999998

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.91  E-value=7.8e-24  Score=197.08  Aligned_cols=116  Identities=23%  Similarity=0.269  Sum_probs=99.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|++.+.||+|+||.||+|.+.. +..||||++...   ...+.+|+.+|+.++||||+++++++.     . ..+
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~-~~~  253 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPI  253 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S-SSC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEc-----C-Cce
Confidence            445679999999999999999999964 467999999753   356789999999999999999999983     2 337


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||||+| +|.+++....  ...+++..+..++.||+.||+|||+++
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~  300 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMN  300 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999985 9999997532  356999999999999999999999998

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.91  E-value=3.7e-24  Score=196.00  Aligned_cols=120  Identities=18%  Similarity=0.272  Sum_probs=102.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ...+|.+.+.||+|+||.||+|+++.+++.||||++...     ...+.+|+.+++.++||||+++++++..   ....+
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~   83 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRH   83 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCC
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCe
Confidence            346799999999999999999999999999999999642     2456799999999999999999999853   23345


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|+|||||+| +|.+++..... ...+++..++.++.||+.||.|||+++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~  132 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENG  132 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999985 99999875332 234999999999999999999999998

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1e-23  Score=188.60  Aligned_cols=116  Identities=20%  Similarity=0.313  Sum_probs=98.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCC----cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETG----EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...+|.+.+.||+|+||.||+|.++.++    ..||||++...     ...+.+|+.+++.++||||+++++++     .
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~  116 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----S  116 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----C
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----e
Confidence            3446999999999999999999987553    35999998643     23467899999999999999999999     5


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+++||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus       117 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  167 (333)
T 1mqb_A          117 KYKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANMN  167 (333)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCcEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            55568999999996 999998752   357999999999999999999999998

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.91  E-value=1.2e-23  Score=187.22  Aligned_cols=116  Identities=20%  Similarity=0.231  Sum_probs=98.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|+++++||+|+||.||+|++.  ++.||||++....   ....+|+.+++.++|||||++++++.... .....+
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~   97 (322)
T 3soc_A           21 FQSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDL   97 (322)
T ss_dssp             ETTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred             cchhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceE
Confidence            34467999999999999999999985  8999999996533   33456888999999999999999996533 224557


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      |+|||||+| +|.+++..     ..+++..++.++.||+.||.|||+.
T Consensus        98 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A           98 WLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             EEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            899999986 99999974     4599999999999999999999998

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.91  E-value=1e-23  Score=188.11  Aligned_cols=115  Identities=21%  Similarity=0.381  Sum_probs=93.2

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEE----EEEEecc-----cchhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIV----AIKKVLQ-----DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----AvK~i~~-----~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...+|++.+.||+|+||.||+|++..+++.+    |+|.+..     ..+.+.+|+.+++.++||||+++++++..    
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----   88 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----   88 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES----
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec----
Confidence            3457999999999999999999998887754    7777642     22467899999999999999999999842    


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .. .++||||+.+ +|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus        89 -~~-~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~  137 (327)
T 3poz_A           89 -ST-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             -SS-EEEEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CC-eEEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence             22 6689999985 999988763   356999999999999999999999998

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.91  E-value=3.1e-26  Score=205.18  Aligned_cols=116  Identities=23%  Similarity=0.176  Sum_probs=89.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------hhHHHHHHHHHhCC---------CCceee
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------RYKNRELQIMQMLD---------HPNIVA  139 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------~~~~~Ei~~l~~l~---------hpnIv~  139 (335)
                      .++|++++.||+|+||+||+|++  +|+.||||++....            +.+.+|+.+|+.++         |||||+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35799999999999999999998  68999999997532            55789999999886         555555


Q ss_pred             ecee-----------------eeeCC--------CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHH
Q 019844          140 LKHC-----------------FFSTT--------DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQIC  193 (335)
Q Consensus       140 ~~~~-----------------~~~~~--------~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  193 (335)
                      ++++                 |....        -....++|||||||.| ++.+.+.     .+.+++..++.|+.||+
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~-----~~~~~~~~~~~i~~qi~  171 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR-----TKLSSLATAKSILHQLT  171 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT-----TTCCCHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH-----hcCCCHHHHHHHHHHHH
Confidence            5544                 42200        0125669999999974 4444442     35689999999999999


Q ss_pred             HHHHHHH-hCC
Q 019844          194 RALAYIH-NCI  203 (335)
Q Consensus       194 ~aL~yLH-~~~  203 (335)
                      .||.||| +++
T Consensus       172 ~aL~~lH~~~~  182 (336)
T 2vuw_A          172 ASLAVAEASLR  182 (336)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHhCC
Confidence            9999999 777

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.90  E-value=4.3e-24  Score=190.40  Aligned_cols=115  Identities=23%  Similarity=0.293  Sum_probs=96.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcE----EEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEI----VAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~----vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...+|++++.||+|+||.||+|.+..+++.    ||+|.+...     ...+.+|+.+++.++||||+++++++     .
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~   85 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-----P   85 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEE-----C
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEE-----c
Confidence            345699999999999999999999888876    677766422     24567899999999999999999988     3


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      + ..+++||||+.| +|.+++...   .+.+++..++.|+.||+.||.|||+++
T Consensus        86 ~-~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  135 (325)
T 3kex_A           86 G-SSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHG  135 (325)
T ss_dssp             B-SSEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             C-CccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            2 237899999995 999888752   356999999999999999999999998

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=2.4e-23  Score=182.98  Aligned_cols=117  Identities=23%  Similarity=0.375  Sum_probs=97.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ....|.+.++||+|+||.||+|.+..++.   .||+|.+....     ..+.+|+.+++.++||||+++++++...    
T Consensus        19 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----   94 (298)
T 3pls_A           19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----   94 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS----
T ss_pred             cceEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC----
Confidence            34468899999999999999999765554   79999986422     4567999999999999999999999432    


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....++||||+.+ +|.+++..   ....+++..++.++.||+.||.|||+++
T Consensus        95 ~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~  144 (298)
T 3pls_A           95 EGLPHVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQK  144 (298)
T ss_dssp             SSCCEEEECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCcEEEEecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            2234799999985 99998875   2456899999999999999999999998

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.90  E-value=1.2e-23  Score=199.66  Aligned_cols=116  Identities=23%  Similarity=0.269  Sum_probs=99.6

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|++.+.||+|+||.||+|.+.. +..||||++...   .+.+.+|+.+|+.++|||||++++++.     . ..+
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~-~~~  336 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----E-EPI  336 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S-SSC
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEe-----e-ccc
Confidence            445679999999999999999999964 467999999753   356789999999999999999999983     2 337


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||||.| +|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~  383 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMN  383 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            899999986 9999997533  356999999999999999999999998

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.90  E-value=2.6e-23  Score=182.76  Aligned_cols=116  Identities=21%  Similarity=0.235  Sum_probs=102.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++...  ...+.+|+.+++.+ +|+||+++++++     ....++|
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~~   82 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHNV   82 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeec-----CCCceeE
Confidence            345699999999999999999999999999999998643  35688999999999 799999999998     5566689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        83 lv~e~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  126 (298)
T 1csn_A           83 LVIDLLGPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKS  126 (298)
T ss_dssp             EEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEEecCCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999966999999863   346999999999999999999999998

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.90  E-value=1.7e-23  Score=182.57  Aligned_cols=116  Identities=28%  Similarity=0.431  Sum_probs=97.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcC---CCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ...++|.+.+.||+|+||.||+|.+..   ++..||+|.+...     ...+.+|+.+++.++||||+++++++.     
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----   83 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-----   83 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-----
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-----
Confidence            344579999999999999999999754   3456999998753     345778999999999999999999982     


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .. ..|+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        84 ~~-~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  133 (281)
T 3cc6_A           84 EE-PTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESIN  133 (281)
T ss_dssp             SS-SCEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CC-CCEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            22 25799999996 999999763   356999999999999999999999998

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1e-23  Score=184.56  Aligned_cols=114  Identities=28%  Similarity=0.332  Sum_probs=95.6

Q ss_pred             eeeeEEee-eeeccCceEEEEEEEc--CCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEH-VVGTGSFGVVFQAKCR--ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~-~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .++|.+.+ .||+|+||.||+|.++  .++..||||++...     ...+.+|+.+++.++||||+++++++.     ..
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~   82 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----AE   82 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----SS
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-----CC
Confidence            34577776 9999999999999864  46788999999753     245779999999999999999999982     11


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .+++||||++| +|.+++..   ....+++..++.++.||+.||.|||+++
T Consensus        83 -~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~  130 (287)
T 1u59_A           83 -ALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN  130 (287)
T ss_dssp             -SEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CcEEEEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence             27899999996 99998864   1456999999999999999999999998

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.90  E-value=3.4e-23  Score=182.21  Aligned_cols=114  Identities=20%  Similarity=0.259  Sum_probs=96.2

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHh--CCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQM--LDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~--l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|++++.||+|+||.||+|.+  +++.||||++.... ....+|.+++..  ++||||+++++++.... .....+
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~~   81 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQL   81 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCcee
Confidence            3455799999999999999999988  68999999996543 445677787777  79999999999975432 345668


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH  200 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH  200 (335)
                      |+||||++| +|.+++.     ...+++..++.++.||+.||.|||
T Consensus        82 ~lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHH
Confidence            899999996 9999985     457999999999999999999999

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.90  E-value=1.3e-23  Score=182.95  Aligned_cols=116  Identities=20%  Similarity=0.257  Sum_probs=98.5

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|++++.||+|+||.||+|.+. ++..||+|.+...   ...+.+|+.+++.++||||+++++++.     .. .+
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~-~~   82 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----QE-PI   82 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS-SC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-----CC-Cc
Confidence            34467999999999999999999984 6778999999643   356789999999999999999999883     22 26


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||++| +|.+++....  ...+++..++.++.||+.||.|||+++
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~  129 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERN  129 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            799999985 9999987532  236999999999999999999999998

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.90  E-value=3e-23  Score=185.12  Aligned_cols=114  Identities=21%  Similarity=0.380  Sum_probs=96.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEE----EEEEecc-----cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIV----AIKKVLQ-----DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~v----AvK~i~~-----~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ..+|++++.||+|+||.||+|.+..+++.+    |+|.+..     ....+.+|+.+++.++||||+++++++..     
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----   88 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-----   88 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence            356999999999999999999998888765    6665532     23557899999999999999999999843     


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .. .++||+|+.+ +|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus        89 ~~-~~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  137 (327)
T 3lzb_A           89 ST-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRR  137 (327)
T ss_dssp             SS-EEEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CC-ceEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            22 6688999985 999988763   456999999999999999999999998

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.90  E-value=1.6e-23  Score=190.03  Aligned_cols=116  Identities=19%  Similarity=0.254  Sum_probs=96.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC---cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG---EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...|.+.+.||+|+||.||+|.+..++   ..||+|.+...     ...+.+|+.+++.++||||+++++++..    ..
T Consensus        88 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~----~~  163 (373)
T 3c1x_A           88 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SE  163 (373)
T ss_dssp             TEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC----CS
T ss_pred             hceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc----CC
Confidence            346999999999999999999986433   46899988642     2457799999999999999999998742    23


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...|+||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  212 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASKK  212 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCeEEEEECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            347899999996 999998742   356899999999999999999999998

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.90  E-value=1.9e-23  Score=188.32  Aligned_cols=116  Identities=15%  Similarity=0.115  Sum_probs=97.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCC--------CcEEEEEEecccchhHHHHHHHHHhCCCCceeee------------
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRET--------GEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVAL------------  140 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~--------~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~------------  140 (335)
                      .++|++.+.||+|+||.||+|++..+        ++.||||++... ..+.+|+.+++.++||||+++            
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i  119 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAI  119 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSC
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-chHHHHHHHHHHhcccchhhhhhhhccCCccCc
Confidence            35799999999999999999999874        889999999764 568899999999999999984            


Q ss_pred             ---ceeeeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 ---KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ---~~~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                         ++++.    ....++|+||||+.|+|.+++....  ...+++..++.|+.||+.||.|||+++
T Consensus       120 ~~~~~~~~----~~~~~~~lv~e~~~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~  179 (352)
T 2jii_A          120 PTCMGFGV----HQDKYRFLVLPSLGRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHENE  179 (352)
T ss_dssp             CCCCEEEE----ETTTEEEEEEECCCEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cchhhccc----cCCcEEEEEecCCCcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence               44442    1245689999999669999998632  367999999999999999999999998

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.90  E-value=1.8e-23  Score=186.73  Aligned_cols=116  Identities=20%  Similarity=0.192  Sum_probs=102.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...+|++.+.||+|+||.||+|++..+++.||||++...  ...+.+|+.+++.+ +||||+++++++     ....++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~-----~~~~~~~   81 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFG-----PCGKYNA   81 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEE-----EETTEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEE-----ecCCccE
Confidence            445699999999999999999999999999999998643  35688999999999 999999999999     4556689


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.|+|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus        82 lv~e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~  125 (330)
T 2izr_A           82 MVLELLGPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKN  125 (330)
T ss_dssp             EEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCCCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999966999999863   357999999999999999999999998

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.90  E-value=7.9e-24  Score=188.10  Aligned_cols=114  Identities=31%  Similarity=0.467  Sum_probs=96.5

Q ss_pred             eee-EEeeeeeccCceEEEEEEE----cCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSY-IAEHVVGTGSFGVVFQAKC----RETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y-~~~~~lG~G~fg~V~~~~~----~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .+| ++++.||+|+||.||+|..    ..+++.||||++....     ..+.+|+.+++.++||||+++++++..   ..
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~  106 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AG  106 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TT
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CC
Confidence            345 9999999999999988764    4578899999997542     447799999999999999999999954   22


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++||||+++ +|.+++..     ..+++..++.++.||+.||.|||+++
T Consensus       107 ~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~  154 (318)
T 3lxp_A          107 AASLQLVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQH  154 (318)
T ss_dssp             TTEEEEEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            4568999999986 99998863     45999999999999999999999998

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.90  E-value=2.1e-23  Score=188.92  Aligned_cols=119  Identities=14%  Similarity=0.180  Sum_probs=96.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCC-----CcEEEEEEecccchhHH---------------HHHHHHHhCCCCceeee
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRET-----GEIVAIKKVLQDKRYKN---------------RELQIMQMLDHPNIVAL  140 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~-----~~~vAvK~i~~~~~~~~---------------~Ei~~l~~l~hpnIv~~  140 (335)
                      ..+|++++.||+|+||.||+|.++.+     ++.||||++........               +|+..++.++||||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            34799999999999999999999764     57899999876543333               34455666789999999


Q ss_pred             ceeeeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       141 ~~~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++++.... ....++|||||||.|+|.+++...   .+.+++..++.|+.||+.||.|||+++
T Consensus       114 ~~~~~~~~-~~~~~~~lv~e~~g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~  172 (364)
T 3op5_A          114 WGSGLHDK-NGKSYRFMIMDRFGSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEHE  172 (364)
T ss_dssp             EEEEEEEE-TTEEEEEEEEECEEEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             Eeeeeecc-CCcceEEEEEeCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99986532 235678999999966999999762   367999999999999999999999998

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.7e-23  Score=186.56  Aligned_cols=118  Identities=31%  Similarity=0.504  Sum_probs=99.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEE----EcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAK----CRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~----~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ...+|++++.||+|+||.||+|+    +..+++.||||++....    ..+.+|+.+++.++||||+++++++...   .
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~  115 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---G  115 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-----
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---C
Confidence            34569999999999999999999    46689999999996532    4577999999999999999999998432   2


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ...+++||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus       116 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~  165 (326)
T 2w1i_A          116 RRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR  165 (326)
T ss_dssp             --CCEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCceEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            3357899999986 999999862   346999999999999999999999998

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.89  E-value=5.2e-23  Score=198.19  Aligned_cols=113  Identities=27%  Similarity=0.308  Sum_probs=94.9

Q ss_pred             eeeEEee-eeeccCceEEEEEEEc--CCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEH-VVGTGSFGVVFQAKCR--ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~-~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      +++.+.+ .||+|+||.||+|.++  .++..||||+++..     ...+.+|+.+|+.++|||||++++++.     . .
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~-----~-~  408 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----A-E  408 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----S-S
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEec-----c-C
Confidence            3456665 8999999999999876  35667999999642     355789999999999999999999983     2 2


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|||||||+| +|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus       409 ~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~  456 (613)
T 2ozo_A          409 ALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKN  456 (613)
T ss_dssp             SEEEEEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeEEEEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            38899999996 999988642   456999999999999999999999998

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.89  E-value=1.3e-22  Score=177.92  Aligned_cols=118  Identities=22%  Similarity=0.240  Sum_probs=97.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc--cchhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ--DKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~--~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...++|++.+.||+|+||.||+|++..+++.||||++..  ....+.+|+.+++.++|++++..+..+.    ....+.+
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~~   81 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV   81 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeec----CCCCceE
Confidence            345679999999999999999999999999999998753  3356889999999999888777766664    3445688


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.|+|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        82 lv~e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~  125 (296)
T 4hgt_A           82 MVMELLGPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             EEEECCCCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999977999998753   456999999999999999999999998

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.89  E-value=1.5e-22  Score=177.73  Aligned_cols=118  Identities=22%  Similarity=0.240  Sum_probs=100.7

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ...++|++.+.||+|+||.||+|++..+++.||||++...  ...+.+|+.+++.++|++++..+..+.    ....+++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~~   81 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV   81 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTEEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCcccccc----CCCCceE
Confidence            3445799999999999999999999999999999998643  356889999999999888777666654    3445688


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.++|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        82 lv~e~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~  125 (296)
T 3uzp_A           82 MVMELLGPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN  125 (296)
T ss_dssp             EEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEecCCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999977999999752   456999999999999999999999998

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.89  E-value=4.1e-23  Score=182.59  Aligned_cols=111  Identities=29%  Similarity=0.400  Sum_probs=94.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++...  .+.+.+|+.+++.++||||+++++++     .+.  +|+|
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~--~~lv   77 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC-----LNP--VCLV   77 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBC-----TTT--TEEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEE-----cCC--cEEE
Confidence            346999999999999999999984  789999999653  35578999999999999999999988     332  6799


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN  201 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~  201 (335)
                      |||++| +|.+++.... ....+++..++.++.||+.||.|||+
T Consensus        78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~  120 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHS  120 (307)
T ss_dssp             EECCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEcCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHh
Confidence            999986 9999987522 12247899999999999999999999

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.89  E-value=8.9e-23  Score=197.15  Aligned_cols=110  Identities=22%  Similarity=0.288  Sum_probs=93.6

Q ss_pred             eEE-eeeeeccCceEEEEEEE--cCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           84 YIA-EHVVGTGSFGVVFQAKC--RETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        84 y~~-~~~lG~G~fg~V~~~~~--~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      +.+ .+.||+|+||.||+|.+  +.+++.||||+++..      ...+.+|+.+|+.++|||||++++++.     .. .
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-----~~-~  443 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-----AE-S  443 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-----SS-S
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cC-C
Confidence            444 35899999999999955  456789999999643      245789999999999999999999882     22 2


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||||.| +|.+++..    ...+++..++.|+.||+.||.|||+++
T Consensus       444 ~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~  489 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN  489 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            7799999996 99999976    667999999999999999999999998

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.89  E-value=1.9e-23  Score=187.76  Aligned_cols=118  Identities=17%  Similarity=0.199  Sum_probs=94.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC---CCcEEEEEEecccc---------------hhHHHHHHHHHhCCCCceeeece
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQDK---------------RYKNRELQIMQMLDHPNIVALKH  142 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~---~~~~vAvK~i~~~~---------------~~~~~Ei~~l~~l~hpnIv~~~~  142 (335)
                      .++|.+++.||+|+||.||+|.+..   ++..+|||++....               ..+.+|+.+++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            3579999999999999999999987   78899999986532               22457788888999999999999


Q ss_pred             eeeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          143 CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       143 ~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++.... .+..++|+|||||.++|.+++..    .+.+++..++.|+.||+.||.|||+++
T Consensus       116 ~~~~~~-~~~~~~~lv~e~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~  171 (345)
T 2v62_A          116 SGLTEF-KGRSYRFMVMERLGIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHENE  171 (345)
T ss_dssp             EEEEES-SSCEEEEEEEECEEEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccc-CCCcEEEEEEeccCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            986532 23667999999996599998875    447999999999999999999999998

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.89  E-value=3.3e-22  Score=178.83  Aligned_cols=116  Identities=20%  Similarity=0.267  Sum_probs=94.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHH--HHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQI--MQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~--l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|++++.||+|+||.||+|++  +++.||||++.... .....|.++  +..++||||+++++.+..........+|
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~   88 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL   88 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence            345699999999999999999977  68999999996533 334445554  4458999999999876544445566789


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +|||||+| +|.+++..     ..+++..++.|+.||+.||.|||++
T Consensus        89 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~  130 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTE  130 (336)
T ss_dssp             EEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhh
Confidence            99999985 99999974     4468999999999999999999998

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.89  E-value=5.1e-23  Score=180.23  Aligned_cols=114  Identities=25%  Similarity=0.340  Sum_probs=89.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC-CCc--EEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE-TGE--IVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~-~~~--~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ..+|++.+.||+|+||.||+|.+.. +++  .||||++...       ...+.+|+.+++.++||||+++++++..    
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----   92 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT----   92 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence            4579999999999999999998643 333  6899988642       2456799999999999999999999842    


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       .. +++||||+.+ +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        93 -~~-~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~  141 (291)
T 1u46_A           93 -PP-MKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKR  141 (291)
T ss_dssp             -SS-CEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CC-ceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence             22 6799999995 999988763   356999999999999999999999998

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.89  E-value=9.5e-23  Score=178.61  Aligned_cols=113  Identities=18%  Similarity=0.238  Sum_probs=92.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ....+|++.+.||+|+||.||+|.+.   ..||+|++...      ...+.+|+.+++.++||||++++++.     . .
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~-~   91 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-----T-A   91 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----C-S
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-----c-C
Confidence            34456999999999999999999874   35999998632      24577999999999999999999965     2 2


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++|||||+| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~  140 (289)
T 3og7_A           92 PQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKS  140 (289)
T ss_dssp             SSCEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CccEEEEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            236799999996 998888542   456999999999999999999999998

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=1.9e-22  Score=180.36  Aligned_cols=115  Identities=22%  Similarity=0.273  Sum_probs=95.7

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHhC--CCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQML--DHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~l--~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|++++.||+|+||.||+|++.  ++.||||++.... ....+|.+++..+  +||||+++++++.... .....+|
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~  111 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGT-GSWTQLY  111 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGGCEEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCCCceE
Confidence            3457999999999999999999985  8999999986443 3445666666655  8999999999986532 2235689


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +|||||+| +|.+++..     ..+++..++.++.||+.||.|||++
T Consensus       112 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~  153 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTE  153 (337)
T ss_dssp             EEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             EEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999986 99999964     4699999999999999999999988

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.88  E-value=5.2e-23  Score=200.90  Aligned_cols=118  Identities=24%  Similarity=0.351  Sum_probs=98.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcC-CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRE-TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~-~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++.+.||+|+||.||+|.++. +++.||||++....     ..+.+|+.+++.++|||||++++++.........
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            34679999999999999999999976 78999999986422     3467899999999999999999999665443444


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+||||||++| +|.+++.      ..+++..++.|+.||+.||.|||++|
T Consensus       158 ~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~g  202 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSIG  202 (681)
T ss_dssp             EEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            57899999996 8887654      36999999999999999999999998

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.88  E-value=2e-22  Score=177.87  Aligned_cols=112  Identities=21%  Similarity=0.289  Sum_probs=95.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      |..++.||+|+||.||+|.+  +++.||||++...        ...+.+|+.+++.++||||+++++++     .....+
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS-----SDGDDL  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSC
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEE-----ecCCce
Confidence            55679999999999999986  5889999998532        24577999999999999999999999     444558


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+||||++| +|.+++.... ....+++..++.++.||+.||.|||+++
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~  153 (307)
T 2nru_A          106 CLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENH  153 (307)
T ss_dssp             EEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999985 9999987533 2456999999999999999999999998

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.88  E-value=5.6e-22  Score=177.70  Aligned_cols=113  Identities=24%  Similarity=0.262  Sum_probs=96.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHh--CCCCceeeeceeeeeCCCCCccEEE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQM--LDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~--l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..++|.+.+.||+|+||.||+|.+  +++.||||++... ...+.+|++++..  ++||||+++++++.... .....+|
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~~~~~~  116 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLW  116 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SSCCCEE
T ss_pred             ccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-CccceeE
Confidence            345799999999999999999998  4899999999654 3456789999988  68999999999985432 1223688


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH  200 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH  200 (335)
                      +||||+++ +|.+++..     ..+++..++.++.||+.||.|||
T Consensus       117 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             EEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHH
Confidence            99999996 99999974     46999999999999999999999

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.87  E-value=4.5e-22  Score=192.89  Aligned_cols=116  Identities=26%  Similarity=0.303  Sum_probs=98.0

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCC---CcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRET---GEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~---~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      ....+|++++.||+|+||.||+|.++.+   +..||+|.+....     ..+.+|+.+++.++||||+++++++.     
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-----  461 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-----  461 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----
Confidence            3456799999999999999999998654   4579999886432     45779999999999999999999882     


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      + ..+|+|||||+| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus       462 ~-~~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g  511 (656)
T 2j0j_A          462 E-NPVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESKR  511 (656)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c-CceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            2 227799999995 999998752   346999999999999999999999998

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.87  E-value=7.6e-22  Score=184.50  Aligned_cols=117  Identities=20%  Similarity=0.244  Sum_probs=98.2

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCC-ceeeeceeeeeCCCCCccEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHP-NIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hp-nIv~~~~~~~~~~~~~~~~~  155 (335)
                      ...++|+++++||+|+||.||+|.+..+++.||||++...  ...+.+|+.+++.|+|+ +|..+..++     ....+.
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~-----~~~~~~   78 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFG-----VEGDYN   78 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEE-----EETTEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEE-----eeCCEE
Confidence            3456799999999999999999999999999999988633  35688999999999874 455554444     345568


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||||+.++|.+++...   ...+++..++.|+.||+.||.|||+++
T Consensus        79 ~lvme~~g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~g  123 (483)
T 3sv0_A           79 VLVMDLLGPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKS  123 (483)
T ss_dssp             EEEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEECCCCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            899999977999999753   456999999999999999999999998

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.87  E-value=4.1e-22  Score=183.33  Aligned_cols=204  Identities=18%  Similarity=0.163  Sum_probs=130.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCC-Cceeeec-----------
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDH-PNIVALK-----------  141 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~h-pnIv~~~-----------  141 (335)
                      ...|.+.+.||+|+||.||+|.+..+|+.||||++...       .+.+.+|+.+++.+.| +|+..++           
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            34599999999999999999999999999999998621       3457799999999977 3221111           


Q ss_pred             ----------eeeeeCCCCCccEEEEEeecchhhHHHHHHHHh---hhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----
Q 019844          142 ----------HCFFSTTDKEELYLNLVLEYVPETVNRIARNYS---RIHQRMPLIYVKLYTYQICRALAYIHNCI-----  203 (335)
Q Consensus       142 ----------~~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~---~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----  203 (335)
                                .++..........++++|+++.++|.+++....   .....+++..+..|+.||+.||+|||+++     
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD  236 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  236 (413)
T ss_dssp             EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence                      111110011123478999999999999886432   12345788889999999999999999998     


Q ss_pred             -------cCh--HHhH-------------hhhcC--CCCHHHhhhhC------C--CCC------------------CCC
Q 019844          204 -------VDQ--LVEI-------------IKVLG--TPTREEIKCMN------P--NYT------------------EFK  233 (335)
Q Consensus       204 -------~~~--~~~~-------------~~~~g--~~~~~~~~~~~------~--~~~------------------~~~  233 (335)
                             ++.  ..++             ...+|  ...++.+....      .  .|.                  ...
T Consensus       237 iKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P  316 (413)
T 3dzo_A          237 LRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP  316 (413)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred             cccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence                   000  0000             01122  11233331110      0  000                  000


Q ss_pred             CCCC-CCCcccccc--ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          234 FPQI-KPHPWHKVF--QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       234 ~~~~-~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +... ....+...+  ...+++++.+||.+||+.||++|||+.++|+||||+++
T Consensus       317 f~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          317 NTDDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             CCTTGGGSCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             CCCcchhhhHHHHHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence            0000 001111112  24689999999999999999999999999999999775

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.86  E-value=2.7e-22  Score=178.02  Aligned_cols=113  Identities=17%  Similarity=0.259  Sum_probs=96.3

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ..++|++.+.||+|+||.||+|.+..   .+|+|++...      .+.+.+|+.+++.++||||+++++++.     ...
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~  102 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM-----SPP  102 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE-----CSS
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCC
Confidence            34569999999999999999999853   4999998632      245678999999999999999999994     444


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+++||||++| +|.+++...   ...+++..++.++.||+.||.|||+++
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~  150 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAKG  150 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            58999999985 999988641   346999999999999999999999998

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.86  E-value=4.2e-21  Score=173.75  Aligned_cols=119  Identities=17%  Similarity=0.172  Sum_probs=99.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEE-----EEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC---CCceeeeceeeeeCCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQA-----KCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD---HPNIVALKHCFFSTTDK  150 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~-----~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~  150 (335)
                      ...+|.+.+.||+|+||.||+|     .+..+++.||||++... ...+.+|+.+++.++   |+||+++++++.     
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~-----  137 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHL-----  137 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE-----
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeee-----
Confidence            3457999999999999999999     46778999999999754 356778999999997   899999999994     


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSR-IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....|||||||+| +|.+++..... ....+++..++.|+.||+.||+|||+++
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~  192 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE  192 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            44458899999995 99999986543 2457999999999999999999999998

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.52  E-value=1.6e-14  Score=137.70  Aligned_cols=104  Identities=14%  Similarity=-0.011  Sum_probs=81.4

Q ss_pred             eeeeccCceEEEEEEEcCCCcEEEEEEeccc--------------chhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCc
Q 019844           88 HVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--------------KRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--------------~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++.|++|.+..++..-.|+.||||++.+.              .+.+.+|+++|+++ .|+||+++++++     ++.
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----ed~  314 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHG-----ENA  314 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEE-----ECS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-----EEC
Confidence            3467788888888887778999999999643              13477999999999 799999999999     667


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|||||||+| +|.++|..    .+.+++.   .|+.||+.||+|||++|
T Consensus       315 ~~~yLVMEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~G  359 (569)
T 4azs_A          315 QSGWLVMEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQG  359 (569)
T ss_dssp             SEEEEEEECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEEecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHCC
Confidence            779999999998 99999986    5677764   48999999999999999

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.50  E-value=4e-14  Score=123.15  Aligned_cols=99  Identities=15%  Similarity=0.083  Sum_probs=78.9

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------------------chhHHHHHHHHHhCCCCceeeec
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------------------KRYKNRELQIMQMLDHPNIVALK  141 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------------------~~~~~~Ei~~l~~l~hpnIv~~~  141 (335)
                      |.+++.||+|+||.||+|.+ .+|+.||||+++..                      ...+.+|+.+|+.++  | ++++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~  167 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP  167 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence            55669999999999999999 88999999999632                      124679999999999  5 7777


Q ss_pred             eeeeeCCCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          142 HCFFSTTDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       142 ~~~~~~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +++.     . ...|+|||||+| +|.+ +          ....+..++.||+.||.|||++|
T Consensus       168 ~~~~-----~-~~~~lvmE~~~g~~L~~-l----------~~~~~~~i~~qi~~~l~~lH~~g  213 (282)
T 1zar_A          168 KVYA-----W-EGNAVLMELIDAKELYR-V----------RVENPDEVLDMILEEVAKFYHRG  213 (282)
T ss_dssp             CEEE-----E-ETTEEEEECCCCEEGGG-C----------CCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEe-----c-cceEEEEEecCCCcHHH-c----------chhhHHHHHHHHHHHHHHHHHCC
Confidence            7652     1 225799999986 8866 2          12335679999999999999998

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.44  E-value=8.6e-14  Score=131.81  Aligned_cols=100  Identities=17%  Similarity=0.213  Sum_probs=72.0

Q ss_pred             EEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           85 IAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        85 ~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ...+.||+|+||.||+|.  ..++.+|+|++...            .+.+.+|+.+|+.++||||+++..++..   .+.
T Consensus       339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~---~~~  413 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD---LDN  413 (540)
T ss_dssp             ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE---TTT
T ss_pred             CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe---CCc
Confidence            456799999999999994  45788999986421            1336799999999999999955444432   222


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                        .|||||||+| +|.+++..            +..|+.||+.||.|||+++
T Consensus       414 --~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~g  451 (540)
T 3en9_A          414 --KRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKND  451 (540)
T ss_dssp             --TEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTT
T ss_pred             --cEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCc
Confidence              5799999985 99888753            5689999999999999998

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.40  E-value=4e-13  Score=115.33  Aligned_cols=105  Identities=15%  Similarity=0.170  Sum_probs=79.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcE--EEEEEecccc----------------------------hhHHHHHHHHHhC
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEI--VAIKKVLQDK----------------------------RYKNRELQIMQML  132 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~--vAvK~i~~~~----------------------------~~~~~Ei~~l~~l  132 (335)
                      -|.+.+.||+|+||.||+|.+..+|+.  ||||+++...                            ..+.+|+.+|+.+
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            388999999999999999999778999  9999874321                            1467899999999


Q ss_pred             CCCce--eeeceeeeeCCCCCccEEEEEeecch--h----hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH-hCC
Q 019844          133 DHPNI--VALKHCFFSTTDKEELYLNLVLEYVP--E----TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH-NCI  203 (335)
Q Consensus       133 ~hpnI--v~~~~~~~~~~~~~~~~~~iv~e~~~--g----~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH-~~~  203 (335)
                      .|++|  ..++++.         ..+|||||++  |    +|.++...       +++..+..++.||+.||.||| +.|
T Consensus       128 ~~~~i~~p~~~~~~---------~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~g  191 (258)
T 1zth_A          128 KEAGVSVPQPYTYM---------KNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEAE  191 (258)
T ss_dssp             HHTTCCCCCEEEEE---------TTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTSC
T ss_pred             HhCCCCCCeEEEcC---------CCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHCC
Confidence            88764  2333221         1569999995  3    56554321       335568899999999999999 887

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.22  E-value=7.5e-12  Score=112.35  Aligned_cols=108  Identities=10%  Similarity=0.058  Sum_probs=68.5

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------------------hhHHHHHHHHHhCCCCceeeeceeee
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------------------RYKNRELQIMQMLDHPNIVALKHCFF  145 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------------------~~~~~Ei~~l~~l~hpnIv~~~~~~~  145 (335)
                      |.++..||.|+||.||+|.+ .+|+.||||+++...                  .....++.+.....|+|++++++...
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            89999999999999999998 479999999875211                  00112222222223444443333221


Q ss_pred             eCCC--CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          146 STTD--KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       146 ~~~~--~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....  .... .+|||||++| .|.++          .....+..++.||+.||.|||.+|
T Consensus       176 ~vp~p~~~~~-~~LVME~i~G~~L~~l----------~~~~~~~~l~~qll~~l~~lH~~g  225 (397)
T 4gyi_A          176 PVPEPIAQSR-HTIVMSLVDALPMRQV----------SSVPDPASLYADLIALILRLAKHG  225 (397)
T ss_dssp             SCCCEEEEET-TEEEEECCSCEEGGGC----------CCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCeeeeccC-ceEEEEecCCccHhhh----------cccHHHHHHHHHHHHHHHHHHHCC
Confidence            1000  0001 2599999998 76432          223346778999999999999998

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.47  E-value=7.2e-07  Score=76.09  Aligned_cols=106  Identities=12%  Similarity=0.022  Sum_probs=82.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc----cchhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ----DKRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~----~~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..|.+...+|.|+++.||++...  +..+++|+...    ....+.+|+.+++.+. +..+.++++++     ......|
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~-----~~~~~~~   86 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE-----RHDGWSN   86 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEE-----ecCCceE
Confidence            34888999999999999999853  68899999863    3346889999999994 67788888887     3445688


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| +|.+.+         .+......++.++..+|..||+..
T Consensus        87 lv~e~i~G~~l~~~~---------~~~~~~~~~~~~l~~~l~~LH~~~  125 (263)
T 3tm0_A           87 LLMSEADGVLCSEEY---------EDEQSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             EEEECCSSEEHHHHC---------CTTTCHHHHHHHHHHHHHHHHHSC
T ss_pred             EEEEecCCeehhhcc---------CCcccHHHHHHHHHHHHHHHhCCC
Confidence            99999998 876542         112234578899999999999843

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.89  E-value=2.7e-05  Score=65.87  Aligned_cols=102  Identities=16%  Similarity=0.071  Sum_probs=71.7

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCCCCc--eeeeceeeeeCCCCCccEEEEEee
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLDHPN--IVALKHCFFSTTDKEELYLNLVLE  160 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~~~~~~~~~~iv~e  160 (335)
                      |.+....+.|..+.||++.. .+|..+++|+.... ...+.+|+.+++.+.+.+  +.+++.+.     ......++|||
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~-----~~~~~~~~v~e   95 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVV-----TEAGRDWLLLG   95 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECSSCEEEEEE
T ss_pred             CceEecccCCCCceEEEEec-CCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEec-----cCCCCCEEEEE
Confidence            55544445667799999965 56778999987543 245779999999995444  45677776     33344789999


Q ss_pred             cchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          161 YVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       161 ~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |++| +|.  ..       ...   ...++.++...|..||...
T Consensus        96 ~i~G~~l~--~~-------~~~---~~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           96 EVPGQDLL--SS-------HLA---PAEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             CCSSEETT--TS-------CCC---HHHHHHHHHHHHHHHTTSC
T ss_pred             ecCCcccC--cC-------cCC---HhHHHHHHHHHHHHHhCCC
Confidence            9998 662  11       112   2367889999999999865

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.85  E-value=2.3e-05  Score=69.93  Aligned_cols=108  Identities=12%  Similarity=0.077  Sum_probs=77.2

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEec--c-----cchhHHHHHHHHHhCC--CCceeeeceeeeeCCCCCccEEE
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVL--Q-----DKRYKNRELQIMQMLD--HPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~--~-----~~~~~~~Ei~~l~~l~--hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..+.|+.|.++.||++...  +..+++|+..  .     ....+.+|+.+++.|.  +..+.+++.++...  ......|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~--~~~g~~~  117 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE--SVIGRAF  117 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT--TTTSSCE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC--CccCCeE
Confidence            3677899999999999864  4678889776  2     2346789999999996  45577887776322  1113467


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| .+.+.      ....++..+...++.+++.+|..||...
T Consensus       118 ~vme~v~G~~l~~~------~~~~l~~~~~~~~~~~l~~~La~LH~~~  159 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQ------SLPGMSPAERTAIYDEMNRVIAAMHTVD  159 (359)
T ss_dssp             EEEECCCCBCCCCT------TCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             EEEEecCCeecCCC------ccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999998 55321      1234778888999999999999999865

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.03  E-value=0.0013  Score=57.06  Aligned_cols=104  Identities=10%  Similarity=0.070  Sum_probs=71.7

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCC-CCc--eeeeceeeeeCCCCCccEEEEEeec
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLD-HPN--IVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~-hpn--Iv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      .+.++.|....||++.     ..+++|.....  ...+.+|+.+|+.+. +..  +.+++....  ........|+||++
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~--~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGM--PSETYQMSFAGFTK   97 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECC--CCSSCSCSCEEEEC
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecC--CCCCCCcceEEEcc
Confidence            4558999999999863     46888976543  356789999998883 333  233333221  11111234689999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++| .|.....      ..++..+...++.|++..|..||+..
T Consensus        98 i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~  134 (304)
T 3sg8_A           98 IKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSIN  134 (304)
T ss_dssp             CCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            998 7654322      24788889999999999999999765

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.99  E-value=0.0053  Score=53.29  Aligned_cols=103  Identities=12%  Similarity=-0.010  Sum_probs=73.6

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCC---ceeeeceeeeeCCCCCccEEEEEeec
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHP---NIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hp---nIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      .+.++.|....||+.     +..+++|+-...  ...+.+|..+|+.|.+.   .|.+++.+..    ......++|||+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCCchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEEec
Confidence            456788998899988     567888875432  24577999999999642   2344444432    122345699999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV  204 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~  204 (335)
                      ++| .|....      -..++..+...++.++...|..||+...
T Consensus        95 i~G~~l~~~~------~~~l~~~~~~~~~~~lg~~La~LH~~~~  132 (306)
T 3tdw_A           95 VQGQILGEDG------MAVLPDDAKDRLALQLAEFMNELSAFPV  132 (306)
T ss_dssp             CCSEECHHHH------HTTSCHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred             cCCeECchhh------hhhCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            998 775532      2346888888999999999999998763

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.97  E-value=0.004  Score=52.75  Aligned_cols=101  Identities=12%  Similarity=0.072  Sum_probs=71.1

Q ss_pred             eeccCce-EEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEEEeecchh-h
Q 019844           90 VGTGSFG-VVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNLVLEYVPE-T  165 (335)
Q Consensus        90 lG~G~fg-~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~iv~e~~~g-~  165 (335)
                      +..|..| .||+......+..+.+|+-+.. ...+.+|...|+.|. +--|.+++.+.     .+....|+|||+++| +
T Consensus        32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~-----~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           32 DNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFI-----RTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEEEEEECCCSEE
T ss_pred             ccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEE-----EECCeEEEEEEeeCCcc
Confidence            4445544 6999888777888999987543 345778999998884 33355666666     333457899999998 7


Q ss_pred             HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          166 VNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       166 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +.+....        .......+..++...|.-||...
T Consensus       107 ~~~~~~~--------~~~~~~~~~~~l~~~L~~Lh~~~  136 (272)
T 4gkh_A          107 AFQVLEE--------YPDSGENIVDALAVFLRRLHSIP  136 (272)
T ss_dssp             HHHHHHH--------CGGGHHHHHHHHHHHHHHHHTSC
T ss_pred             ccccccC--------CHHHHHHHHHHHHHHHHHhcCCC
Confidence            7766543        12234567889999999999765

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=96.59  E-value=0.0096  Score=53.60  Aligned_cols=98  Identities=14%  Similarity=0.069  Sum_probs=60.1

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----------chhHHHHHHHHHhCCC--Cc-eeeeceeeeeCCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----------KRYKNRELQIMQMLDH--PN-IVALKHCFFSTTDKEE  152 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----------~~~~~~Ei~~l~~l~h--pn-Iv~~~~~~~~~~~~~~  152 (335)
                      .+.||.|.++.||++....+++.++||.....           .....+|..+|+.+..  +. +.+++.+.     ...
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-----~~~  109 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-----TEM  109 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-----TTT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-----CCc
Confidence            56799999999999987656788999976421           2345789999988732  33 33554432     222


Q ss_pred             cEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHH
Q 019844          153 LYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH  200 (335)
Q Consensus       153 ~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH  200 (335)
                        .++|||+++|  .+...+..    . ....    ..+.++...|.-+|
T Consensus       110 --~~lvmE~l~g~~~~~~~l~~----~-~~~~----~~~~~l~~~La~lH  148 (397)
T 2olc_A          110 --AVTVMEDLSHLKIARKGLIE----G-ENYP----HLSQHIGEFLGKTL  148 (397)
T ss_dssp             --TEEEECCCTTSEEHHHHHHT----T-CCCT----THHHHHHHHHHHHH
T ss_pred             --cEEEEEeCCCcchHHHHHhc----C-CcCH----HHHHHHHHHHHHHh
Confidence              3599999987  44333321    1 1121    23567777777788

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=96.07  E-value=0.028  Score=49.64  Aligned_cols=118  Identities=10%  Similarity=0.054  Sum_probs=75.2

Q ss_pred             eEEeeee-eccCceEEEEEEEc--C----CCcEEEEEEecccc-------hhHHHHHHHHHhCC-C--Cceeeeceeeee
Q 019844           84 YIAEHVV-GTGSFGVVFQAKCR--E----TGEIVAIKKVLQDK-------RYKNRELQIMQMLD-H--PNIVALKHCFFS  146 (335)
Q Consensus        84 y~~~~~l-G~G~fg~V~~~~~~--~----~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~-h--pnIv~~~~~~~~  146 (335)
                      ....+.| +.|..+.+|++...  .    ++..+++|......       ..+.+|+.+++.|. +  -.+.+++.+...
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~  101 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETT  101 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECS
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccC
Confidence            3446778 88989999988753  0    25678999765432       45779999999884 3  345666666521


Q ss_pred             CCCCCccEEEEEeecchh-hHHHHHHHHhh--hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          147 TTDKEELYLNLVLEYVPE-TVNRIARNYSR--IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       147 ~~~~~~~~~~iv~e~~~g-~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .  ......|+||||++| .+.+.+.....  ....++..+...++.++...|.-||+..
T Consensus       102 ~--~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~  159 (357)
T 3ats_A          102 G--DVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIP  159 (357)
T ss_dssp             S--TTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             C--CccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            1  111234689999998 55322100000  0013566667788999999999999865

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.76  E-value=0.071  Score=46.26  Aligned_cols=94  Identities=12%  Similarity=0.029  Sum_probs=68.1

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC---CCceeeeceeeeeCCCCCccEEEEEeec
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD---HPNIVALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~---hpnIv~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      -.+.|+.|.+..+|+...  ++..+++|+-... ...+.+|...|+.|.   ...|.+++.+.     ......++||||
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~-----~~~g~~~lvme~  112 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIG-----NSQGHSFLLLEA  112 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEE-----ECSSEEEEEEEC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEe-----ecCCceEEEEEe
Confidence            357789999999999985  4678889987543 345778999998883   35567777765     223457899999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV  204 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~  204 (335)
                      ++| .+              +.    ..+.++..+|.-||....
T Consensus       113 l~G~~~--------------~~----~~~~~lG~~LA~LH~~~~  138 (312)
T 3jr1_A          113 LNKSKN--------------KQ----SSFTIFAEKIAQLHQIQG  138 (312)
T ss_dssp             CCCCCC--------------CT----THHHHHHHHHHHHHHCCC
T ss_pred             ccCCCC--------------Cc----hhHHHHHHHHHHHHcCCC
Confidence            997 32              11    235688889999998763

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=94.21  E-value=0.62  Score=39.50  Aligned_cols=93  Identities=15%  Similarity=0.078  Sum_probs=62.8

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----hhHHHHHHHHHhCCCC---ceeeeceeeeeCCCCCccEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----RYKNRELQIMQMLDHP---NIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----~~~~~Ei~~l~~l~hp---nIv~~~~~~~~~~~~~~~~~~  156 (335)
                      ..-.+.+|.|..+.||++.. .+|+.|.+|+-+...    ..+.+|...|+.|...   -+.+++.+-     .    -+
T Consensus        17 v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~-----~----~~   86 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD-----D----RT   86 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE-----T----TE
T ss_pred             eEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc-----C----ce
Confidence            56678899999999999987 578999999865322    3467899999988422   233444332     1    24


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||+.+.             ..+...    ..++...|.-||...
T Consensus        87 lv~e~l~~~-------------~~~~~~----~~~lg~~La~lH~~~  116 (288)
T 3f7w_A           87 LAMEWVDER-------------PPTPEA----AERFGHQLAAMHLAG  116 (288)
T ss_dssp             EEEECCCCC-------------CCCHHH----HHHHHHHHHHHHHTC
T ss_pred             EEEEeeccc-------------CCChHH----HHHHHHHHHhhhhcc
Confidence            899998841             122222    345667788889765

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=92.53  E-value=0.48  Score=43.37  Aligned_cols=99  Identities=14%  Similarity=0.193  Sum_probs=65.0

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhH---HHHHHHHHhCCCCce-eeeceeeeeCCCCCccEEEEEeec
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK---NRELQIMQMLDHPNI-VALKHCFFSTTDKEELYLNLVLEY  161 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~---~~Ei~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~iv~e~  161 (335)
                      -.+.|+.|-...+|++.....+..+++|+.......+   .+|..+++.|...++ .++++++     .+.    +||||
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~-----~~G----~v~e~  182 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF-----TNG----RIEEF  182 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE-----TTE----EEEEC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe-----CCe----EEEEe
Confidence            3567888888999999875445789999775433222   589999999965444 4666665     321    59999


Q ss_pred             chh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCcC
Q 019844          162 VPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIVD  205 (335)
Q Consensus       162 ~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~~  205 (335)
                      ++| .|.         ...+..   ..++.+|+..|.-||.....
T Consensus       183 I~G~~l~---------~~~l~~---~~~~~~ia~~La~LH~~~~~  215 (458)
T 2qg7_A          183 MDGYALS---------REDIKN---PKFQKLIAKNLKLLHDIKLN  215 (458)
T ss_dssp             CCSEECC---------TTTTTS---HHHHHHHHHHHHHHHTCCCC
T ss_pred             eCCccCC---------hhhcCC---HHHHHHHHHHHHHHhcCCcc
Confidence            998 542         111211   24578889999999987644

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=92.18  E-value=0.57  Score=42.50  Aligned_cols=96  Identities=16%  Similarity=0.252  Sum_probs=65.2

Q ss_pred             eeeeeccCceEEEEEEEcC-------CCcEEEEEEecc-cc-hhHHHHHHHHHhCCCCce-eeeceeeeeCCCCCccEEE
Q 019844           87 EHVVGTGSFGVVFQAKCRE-------TGEIVAIKKVLQ-DK-RYKNRELQIMQMLDHPNI-VALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~-~~-~~~~~Ei~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~  156 (335)
                      .+.|+.|-...||++....       .++.+++|+... .. ..+.+|..+++.|...++ .++++.+     .+    .
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~----g  148 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPETESHLVAESVIFTLLSERHLGPKLYGIF-----SG----G  148 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT----E
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC----C
Confidence            5678888889999998642       257899998744 33 556689999988843333 5666655     32    2


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +||||++| .|..         ..+.   -..++.+|+..|.-||...
T Consensus       149 ~v~e~l~G~~l~~---------~~l~---~~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          149 RLEEYIPSRPLSC---------HEIS---LAHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             EEECCCCEEECCT---------TGGG---SHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEEeCCcccCh---------hhcC---CHHHHHHHHHHHHHHhCCc
Confidence            89999998 5421         0011   1235788999999999865

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=91.69  E-value=0.4  Score=41.52  Aligned_cols=98  Identities=13%  Similarity=0.164  Sum_probs=54.2

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCC--CceeeeceeeeeCC--CCCccEEEEEeecc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH--PNIVALKHCFFSTT--DKEELYLNLVLEYV  162 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~h--pnIv~~~~~~~~~~--~~~~~~~~iv~e~~  162 (335)
                      .+.|+.|..+.||++...  +..+++|+.......+..|+.+++.|..  -.|.+++... ...  .......++||+|+
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~~~~~~~e~~~l~~L~~~g~~vp~~~~~~-~g~~~~~~~~~~~~l~~~i  113 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRPEKKALFSIFAQDYLAKKGMNVPGILPNK-KGSLYSKHGSFLFVVYDWI  113 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSCHHHHHHHHHHHHHHHHHTCSSCCBCCCT-TSCSCEEETTEEEEEEECC
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCCHHHHHHHHHHHHHHHHcCCCCCceeecC-CCCEEEEECCEEEEEEEee
Confidence            455677788899999863  3459999987655555567777776631  1233333210 000  01233478999999


Q ss_pred             hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          163 PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       163 ~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +| .+.           ..+.    ..+.++...|.-||..
T Consensus       114 ~G~~~~-----------~~~~----~~~~~~g~~La~lH~~  139 (346)
T 2q83_A          114 EGRPFE-----------LTVK----QDLEFIMKGLADFHTA  139 (346)
T ss_dssp             CCBCCC-----------TTSH----HHHHHHHHHHHHHHHH
T ss_pred             cCccCC-----------CCCH----HHHHHHHHHHHHHHHh
Confidence            98 431           0111    1246777777778853

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=91.61  E-value=0.97  Score=39.13  Aligned_cols=100  Identities=9%  Similarity=0.019  Sum_probs=57.6

Q ss_pred             eeeeccCceE-EEEEEEcCCCcEEEEEEecccc-hhHHHHHHHHHhCCC--CceeeeceeeeeCCCCCccEEEEEeecch
Q 019844           88 HVVGTGSFGV-VFQAKCRETGEIVAIKKVLQDK-RYKNRELQIMQMLDH--PNIVALKHCFFSTTDKEELYLNLVLEYVP  163 (335)
Q Consensus        88 ~~lG~G~fg~-V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei~~l~~l~h--pnIv~~~~~~~~~~~~~~~~~~iv~e~~~  163 (335)
                      +.|+.|+... +|+... .++..+++|...... ..+..|+.+++.|..  -.+.+++.+.     ....  +++||+++
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~~~~~~e~~~l~~L~~~g~~vP~v~~~d-----~~~g--~ll~e~l~   95 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEGGDTQPFVDLAQYLRNLDISAPEIYAEE-----HARG--LLLIEDLG   95 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTTTCCSHHHHHHHHHHHHTTCBCCCEEEEE-----TTTT--EEEECCCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCCccccHHHHHHHHHHhCCCCCCceeeec-----CCCC--EEEEeeCC
Confidence            4455554444 556653 236677788665443 567788988888742  2244555442     2223  47999998


Q ss_pred             h-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          164 E-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       164 g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      | .+.+.+..     ....+   ...+.++...|.-||...
T Consensus        96 ~~~l~~~l~~-----~~~~~---~~~~~~~~~~La~lH~~~  128 (333)
T 3csv_A           96 DALFTEVINN-----DPAQE---MPLYRAAVDLLIHLHDAQ  128 (333)
T ss_dssp             SCBHHHHHHH-----CGGGH---HHHHHHHHHHHHHHHTSC
T ss_pred             CcchHHHhcC-----CCccH---HHHHHHHHHHHHHHhcCC
Confidence            7 77776653     11211   456788999999999765

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=91.18  E-value=0.82  Score=37.18  Aligned_cols=32  Identities=25%  Similarity=0.309  Sum_probs=28.5

Q ss_pred             hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH
Q 019844          165 TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI  199 (335)
Q Consensus       165 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yL  199 (335)
                      +|.++|..+   +.+++|.++|.++.|.+.+|.-+
T Consensus        34 SL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~   65 (229)
T 2yle_A           34 SLEEILRLY---NQPINEEQAWAVCYQCCGSLRAA   65 (229)
T ss_dssp             EHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhh
Confidence            799999874   67899999999999999998776

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=89.31  E-value=0.023  Score=52.31  Aligned_cols=56  Identities=13%  Similarity=0.033  Sum_probs=17.1

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEE------EEeccc------chhHHHHHHHHHhCCCCceeeeceeee
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAI------KKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFF  145 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAv------K~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~  145 (335)
                      .+.||   ||.||++........||+      |.....      ...+.+|..+++.++|||+++.+.+-.
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence            45666   999999998765567888      655321      134567888999999999999988764

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=88.54  E-value=1.4  Score=37.51  Aligned_cols=93  Identities=12%  Similarity=0.026  Sum_probs=57.4

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecccch---hHHHHHHHHHhCCCCce-eeeceeeeeCCCCCccEEEEEeecc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR---YKNRELQIMQMLDHPNI-VALKHCFFSTTDKEELYLNLVLEYV  162 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~---~~~~Ei~~l~~l~hpnI-v~~~~~~~~~~~~~~~~~~iv~e~~  162 (335)
                      .+.|+.|....+|++      ..+++|+......   ...+|+.+++.+...++ .+++.+.     .+..  ++|+||+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~-----~~~~--~~v~e~i   89 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVD-----PATG--VMVTRYI   89 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEEC-----TTTC--CEEEECC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEE-----CCCC--EEEEeec
Confidence            677889999999999      4588887754321   23578888877742222 3444433     2222  3899999


Q ss_pred             -hh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          163 -PE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       163 -~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       +| +|......    .       ...++.+++..|.-||...
T Consensus        90 ~~g~~l~~~~~~----~-------~~~~~~~~~~~La~lH~~~  121 (301)
T 3dxq_A           90 AGAQTMSPEKFK----T-------RPGSPARAGEAFRKLHGSG  121 (301)
T ss_dssp             TTCEECCHHHHH----H-------STTHHHHHHHHHHHHHTSC
T ss_pred             CCCccCCHhhHh----h-------hHHHHHHHHHHHHHHhCCC
Confidence             76 44221100    0       0135778889999999866

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=88.36  E-value=2.7  Score=37.72  Aligned_cols=99  Identities=14%  Similarity=0.169  Sum_probs=59.3

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEec-------cc-c---hhHHHHHHHHHhC---CCCceeeeceeeeeCCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVL-------QD-K---RYKNRELQIMQML---DHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~-------~~-~---~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+.||.|..+.||++..  +++.++||...       .. .   .....|.+++..+   ....+.+++.+.     .. 
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~-----~~-  110 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD-----RT-  110 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE-----TT-
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC-----CC-
Confidence            56789999999999964  56789999421       11 1   2233454444433   234455666554     21 


Q ss_pred             cEEEEEeecc-hh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYV-PE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~-~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ..++|||++ +|  .+...+..    ....+     ..+.++...|.-||...
T Consensus       111 -~~~lv~e~l~~g~~~l~~~l~~----~~~~~-----~~~~~lg~~La~lH~~~  154 (420)
T 2pyw_A          111 -MALIGMRYLEPPHIILRKGLIA----GIEYP-----FLADHMSDYMAKTLFFT  154 (420)
T ss_dssp             -TTEEEECCCCTTCEEHHHHHHH----TCCCT-----THHHHHHHHHHHHHHTT
T ss_pred             -ccEEEEeecCCcchhHHHHHhc----CCCCH-----HHHHHHHHHHHHHHHhc
Confidence             246999999 86  45444432    11111     24677888888889665

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=87.64  E-value=0.98  Score=40.20  Aligned_cols=96  Identities=16%  Similarity=0.149  Sum_probs=58.2

Q ss_pred             eeeeeccCceEEEEEEEcC-------CCcEEEEEEecc---cchhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEE
Q 019844           87 EHVVGTGSFGVVFQAKCRE-------TGEIVAIKKVLQ---DKRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~-------~~~~vAvK~i~~---~~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .+.|..|-...+|++....       .++.|++|+...   ......+|..+++.|. +.-..++++++     .+.   
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~g---  126 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVF-----PEG---  126 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TTE---
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CCc---
Confidence            3456667777889988642       357899987633   2234568999998884 32235566655     332   


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       +||||++| .|..         ..+..   ..+..+|+..|.-||...
T Consensus       127 -~v~e~i~G~~l~~---------~~l~~---p~~~~~ia~~La~LH~~~  162 (379)
T 3feg_A          127 -RLEQYIPSRPLKT---------QELRE---PVLSAAIATKMAQFHGME  162 (379)
T ss_dssp             -EEEECCSEEECCG---------GGGGC---HHHHHHHHHHHHHHHTCC
T ss_pred             -cEEEEecCccCCh---------hHhCC---HHHHHHHHHHHHHHhCCC
Confidence             89999998 5421         11111   245678999999999875

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=85.46  E-value=4.5  Score=34.49  Aligned_cols=99  Identities=11%  Similarity=-0.017  Sum_probs=57.8

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEecc--cchhHHHHHHHHHhCCCCc--eeeeceeeeeCCC--CCccEEEEEe
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ--DKRYKNRELQIMQMLDHPN--IVALKHCFFSTTD--KEELYLNLVL  159 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~--~~~~~~~Ei~~l~~l~hpn--Iv~~~~~~~~~~~--~~~~~~~iv~  159 (335)
                      -.+.|+.|....+|++... .| .+++|....  ....+..|+.++..|...+  +.+++... ....  ......+++|
T Consensus        26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~~~~~g~~~~l~  102 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKGLSCPLPLPRK-DGELLGELSGRPAALI  102 (322)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC---CCHHHHHHHHHHHHHHTTCCCCCBCCBT-TCCSCEEETTEEEEEE
T ss_pred             EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCCCCCCcccCCC-CCCEEEEECCEEEEEE
Confidence            4567888888999999863 33 688998865  3456778999888874222  23333211 0000  0123467999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      +|++| .+.          . .+    ...+.++...|.-||..
T Consensus       103 ~~l~G~~~~----------~-~~----~~~~~~~g~~La~lH~~  131 (322)
T 2ppq_A          103 SFLEGMWLR----------K-PE----AKHCREVGKALAAMHLA  131 (322)
T ss_dssp             ECCCCBCCS----------S-CC----HHHHHHHHHHHHHHHHH
T ss_pred             EeCCCcCCC----------C-CC----HHHHHHHHHHHHHHHHH
Confidence            99998 331          1 12    23456778888888864

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=84.31  E-value=2.3  Score=37.32  Aligned_cols=95  Identities=12%  Similarity=0.099  Sum_probs=56.3

Q ss_pred             eeeeeccCceEEEEEEEcC--------CCcEEEEEEecccchh---HHHHHHHHHhCCCCc-eeeeceeeeeCCCCCccE
Q 019844           87 EHVVGTGSFGVVFQAKCRE--------TGEIVAIKKVLQDKRY---KNRELQIMQMLDHPN-IVALKHCFFSTTDKEELY  154 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~--------~~~~vAvK~i~~~~~~---~~~Ei~~l~~l~hpn-Iv~~~~~~~~~~~~~~~~  154 (335)
                      .+.|+.|....+|++....        .+..+++|+.......   ...|..+++.|...+ +.++++.+     .+   
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~~---  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF-----NG---  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE-----TT---
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec-----CC---
Confidence            4567888888999998643        1367888877543322   357888888884333 34565544     21   


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                       ++||||++| .+...         .+..   ...+.+++..|.-||..
T Consensus       110 -~~v~e~i~G~~l~~~---------~~~~---~~~~~~~a~~La~lH~~  145 (369)
T 3c5i_A          110 -GRIEEWLYGDPLRID---------DLKN---PTILIGIANVLGKFHTL  145 (369)
T ss_dssp             -EEEEECCCSEECCGG---------GGGC---HHHHHHHHHHHHHHHTH
T ss_pred             -cEEEEEecCCcCChh---------hcCC---hHHHHHHHHHHHHHHcC
Confidence             489999998 43110         0110   23467888888888863

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=80.50  E-value=6  Score=35.64  Aligned_cols=96  Identities=10%  Similarity=0.132  Sum_probs=59.8

Q ss_pred             eeeeeccCceEEEEEEEcCC-------CcEEEEEEecccchh---HHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEE
Q 019844           87 EHVVGTGSFGVVFQAKCRET-------GEIVAIKKVLQDKRY---KNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~-------~~~vAvK~i~~~~~~---~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .+.|..|-...+|++.....       ++.|++++.......   ..+|..+++.|. +.-..++++.+     .+    
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~-----~~----  145 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF-----PE----  145 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE-----TT----
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc-----CC----
Confidence            55677788889999987421       578999876543222   358999988884 32234555544     21    


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||||++| .|..         ..+..   ..++.+|+..|.-||+..
T Consensus       146 ~~I~efI~G~~l~~---------~~l~~---~~~~~~ia~~La~LH~~~  182 (424)
T 3mes_A          146 GRIEEFIDGEPLTT---------KQLQL---THICVEVAKNMGSLHIIN  182 (424)
T ss_dssp             EEEEECCCSEECCT---------GGGGS---HHHHHHHHHHHHHHHTHH
T ss_pred             CEEEEEeCCccCCh---------hhcCC---HHHHHHHHHHHHHHhcCc
Confidence            479999998 4310         01111   235678888888888643

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=80.05  E-value=2.8  Score=36.46  Aligned_cols=96  Identities=18%  Similarity=0.208  Sum_probs=58.4

Q ss_pred             eccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCC---CceeeeceeeeeCC--CCCccEEEEEeecchh-
Q 019844           91 GTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDH---PNIVALKHCFFSTT--DKEELYLNLVLEYVPE-  164 (335)
Q Consensus        91 G~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~h---pnIv~~~~~~~~~~--~~~~~~~~iv~e~~~g-  164 (335)
                      |.|....||++.. ..| .+++|+.....  ..+|+.+++.|..   |+|.+.+... ...  .......++||+|++| 
T Consensus        32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~--~~~E~~~l~~L~~~g~~~vp~pi~~~-~G~~~~~~~g~~~~l~~~i~G~  106 (339)
T 3i1a_A           32 GADTNAFAYQADS-ESK-SYFIKLKYGYH--DEINLSIIRLLHDSGIKEIIFPIHTL-EAKLFQQLKHFKIIAYPFIHAP  106 (339)
T ss_dssp             TSCSSCEEEEEEC-SSC-EEEEEEEECSS--CCHHHHHHHHHHHTTCCSSCCCCCCT-TSCSSEECSSEEEEEEECCCCC
T ss_pred             cCccccceEEEEe-CCC-CEEEEEecCcc--chHHHHHHHHHHhcCCcccccceecC-CCCEEEEECCEEEEEEeccCCC
Confidence            3344678999985 345 89999776533  3578888877732   3244444321 000  0123557899999998 


Q ss_pred             hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 019844          165 TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV  204 (335)
Q Consensus       165 ~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~  204 (335)
                      .+.         ...++...    +.++...|.-||....
T Consensus       107 ~~~---------~~~~~~~~----~~~lg~~La~LH~~~~  133 (339)
T 3i1a_A          107 NGF---------TQNLTGKQ----WKQLGKVLRQIHETSV  133 (339)
T ss_dssp             BTT---------TSCCCHHH----HHHHHHHHHHHHTCCC
T ss_pred             cCc---------ccCCCHHH----HHHHHHHHHHHhCcCC
Confidence            441         12344433    4678888999998763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	335
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-39
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-38
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-28
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-24
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-24
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-05
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-23
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-06
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-23
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-22
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-05
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-22
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-22
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-22
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-22
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	5e-06
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-22
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-21
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-21
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-20
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-20
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	6e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-20
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-20
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-20
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	7e-20
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-14
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-17
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-19
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-18
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	7e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-18
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-10
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-18
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-18
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-17
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-13
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-17
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-13
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-17
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-05
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-17
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-05
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-17
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-17
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-11
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-16
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-16
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-16
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-16
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-15
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-15
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-15
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-13
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-15
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-14
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-14
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-14
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-13
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-13
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-12
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-12
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-12
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	0.002
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-12
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-11
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	5e-08

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (355), Expect = 1e-39
 Identities = 84/122 (68%), Positives = 91/122 (74%), Gaps = 1/122 (0%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQ 263
           VDQLVEIIKVLGTPTRE+I+ MNPNYTEFKFPQIK HPW KVF+ R PPEA+ L  R  +
Sbjct: 229 VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLE 288

Query: 264 YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEH 323
           Y+P  R T LEAC H FFDELRDPN +LPNGR  P LFNF   ELS  PP     LIP H
Sbjct: 289 YTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLA-TILIPPH 347

Query: 324 AR 325
           AR
Sbjct: 348 AR 349

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 7e-38
 Identities = 82/130 (63%), Positives = 106/130 (81%), Gaps = 1/130 (0%)

Query: 73  GRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQML 132
           G+  +  Q+VSY    V+G GSFGVV+QAK  ++GE+VAIKKVLQDKR+KNRELQIM+ L
Sbjct: 11  GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70

Query: 133 DHPNIVALKHCFFST-TDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQ 191
           DH NIV L++ F+S+   K+E+YLNLVL+YVPETV R+AR+YSR  Q +P+IYVKLY YQ
Sbjct: 71  DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130

Query: 192 ICRALAYIHN 201
           + R+LAYIH+
Sbjct: 131 LFRSLAYIHS 140

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  108 bits (271), Expect = 6e-28
 Identities = 48/273 (17%), Positives = 84/273 (30%), Gaps = 72/273 (26%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
           +     +G GSFG V+ A+     E+VAIKK+    +  N       +E++ +Q L HPN
Sbjct: 17  FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
            +  + C+     +   +  LV+EY        +       + +  + +   T+   + L
Sbjct: 77  TIQYRGCY---LREHTAW--LVMEYCL---GSASDLLEVHKKPLQEVEIAAVTHGALQGL 128

Query: 197 AYIH------------NCIVD--------------QLVEIIKVLGTP---TREEIKCMNP 227
           AY+H            N ++                +      +GTP     E I  M+ 
Sbjct: 129 AYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDE 188

Query: 228 NYTEFK----------------------------FPQIKPHPWHKVFQKRLPPEAVDLVC 259
              + K                               I  +    +          + V 
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD 248

Query: 260 RFFQYSPNLRCTALEACVHPFFDELRDPNTRLP 292
              Q  P  R T+     H F    R P   + 
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMD 281

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.5 bits (245), Expect = 1e-24
 Identities = 46/260 (17%), Positives = 90/260 (34%), Gaps = 69/260 (26%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNIVAL 140
           +  +G GSF  V++    ET   VA  ++   K  K+       E ++++ L HPNIV  
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            +  + +T K +  + LV E +    +   + Y +  + M +  ++ +  QI + L ++H
Sbjct: 74  -YDSWESTVKGKKCIVLVTELMT---SGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 129

Query: 201 --------------NCIVDQLVEIIK-----------------VLGTP------------ 217
                         N  +      +K                 V+GTP            
Sbjct: 130 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKY 189

Query: 218 -----------TREEIKCMNPNYTEFKFP-----QIKPHPWHKVFQKRLPPEAVDLVCRF 261
                         E+      Y+E +       ++        F K   PE  +++   
Sbjct: 190 DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGC 249

Query: 262 FQYSPNLRCTALEACVHPFF 281
            + + + R +  +   H FF
Sbjct: 250 IRQNKDERYSIKDLLNHAFF 269

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.4 bits (247), Expect = 2e-24
 Identities = 46/247 (18%), Positives = 80/247 (32%), Gaps = 23/247 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIM-QMLDHPNIVALKH 142
            +   V+G G  G V Q   + T E  A+ K+LQD     RE+++  +    P+IV +  
Sbjct: 14  KVTSQVLGLGINGKVLQIFNKRTQEKFAL-KMLQDCPKARREVELHWRASQCPHIVRIVD 72

Query: 143 CFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
            + +     +  L +V+E +   E  +RI     R  Q             I  A+ Y+H
Sbjct: 73  VYENLYAGRK-CLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLH 128

Query: 201 NCIV---DQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL 257
           +  +   D   E +          +K  +  + +                  + PE    
Sbjct: 129 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCYTPYYVAPE---- 183

Query: 258 VCRFFQYSP-----NLRCTALEACV--HPFFDELRDPNTRLPNGRPLPPLFNFKPPELSG 310
           V    +Y       +L            PF+       +     R     + F  PE S 
Sbjct: 184 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 243

Query: 311 IPPETIN 317
           +  E   
Sbjct: 244 VSEEVKM 250

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 15/86 (17%), Positives = 26/86 (30%), Gaps = 1/86 (1%)

Query: 215 GTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALE 274
           G P       +  +       ++  + +       +  E   L+    +  P  R T  E
Sbjct: 209 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITE 268

Query: 275 ACVHPFF-DELRDPNTRLPNGRPLPP 299
              HP+     + P T L   R L  
Sbjct: 269 FMNHPWIMQSTKVPQTPLHTSRVLKE 294

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 95.5 bits (237), Expect = 6e-23
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 11/122 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL----QDKRYKNRELQIMQMLDHPNIVA 139
           Y     +GTG+FGVV +   R TG   A K V+     DK    +E+Q M +L HP +V 
Sbjct: 28  YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 87

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           L   F    D  E+   ++ E++      +    +  H +M       Y  Q+C+ L ++
Sbjct: 88  LHDAF---EDDNEMV--MIYEFMSG--GELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 140

Query: 200 HN 201
           H 
Sbjct: 141 HE 142

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 248 KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP--NTRLPNGRPLP 298
             +  +  D + +     PN R T  +A  HP+      P  ++++P+ R   
Sbjct: 250 SGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTK 302

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.1 bits (236), Expect = 6e-23
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 13/123 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           +     +G G+ GVVF+   + +G ++A K +  + +        RELQ++   + P IV
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
                F       E+   + +E++            +   R+P   +   +  + + L Y
Sbjct: 68  GFYGAF---YSDGEIS--ICMEHMD---GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTY 119

Query: 199 IHN 201
           +  
Sbjct: 120 LRE 122

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 15/91 (16%), Positives = 24/91 (26%), Gaps = 14/91 (15%)

Query: 205 DQLVEIIKVLGTPTREEIKCMNPNYTEFKF--------------PQIKPHPWHKVFQKRL 250
            +L+   +V G       +   P      +                I   P  K+     
Sbjct: 211 LELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVF 270

Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFF 281
             E  D V +    +P  R    +  VH F 
Sbjct: 271 SLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 94.7 bits (235), Expect = 1e-22
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIMQMLDHPNIVALKHCF 144
            +G+G+FGVV +   + TG +   K +      DK     E+ IM  L HP ++ L   F
Sbjct: 36  ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 95

Query: 145 FSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
               DK E+   L+LE++   E  +RIA        +M    V  Y  Q C  L ++H  
Sbjct: 96  ---EDKYEMV--LILEFLSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMHEH 146

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 42.0 bits (98), Expect = 6e-05
 Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 1/91 (1%)

Query: 239 PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF-DELRDPNTRLPNGRPL 297
              + +     + PEA D +    Q  P  R T  +A  HP+   +  +  +R+P+ R  
Sbjct: 244 DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSSRYN 303

Query: 298 PPLFNFKPPELSGIPPETINRLIPEHARKQN 328
                 K        P+     I   +  + 
Sbjct: 304 KIRQKIKEKYADWPAPQPAIGRIANFSSLRK 334

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.1 bits (231), Expect = 1e-22
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 10/124 (8%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVL------QDKRYKNRELQIMQMLDHPNI 137
           Y   + +GTGS+G   + + +  G+I+  K++        +K+    E+ +++ L HPNI
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           V         T+     L +V+EY     +  +    ++  Q +   +V     Q+  AL
Sbjct: 66  VRYYDRIIDRTNT---TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 122

Query: 197 AYIH 200
              H
Sbjct: 123 KECH 126

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 1e-22
 Identities = 50/266 (18%), Positives = 87/266 (32%), Gaps = 75/266 (28%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV---LQDKRYKNRELQIMQMLDHPNIVAL 140
           Y+    +G G FG+V +     + +    K V     D+    +E+ I+ +  H NI+ L
Sbjct: 7   YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHL 66

Query: 141 KHCFFSTTDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
              F      EEL   ++ E++   +   RI  +   +++R     +  Y +Q+C AL +
Sbjct: 67  HESF---ESMEELV--MIFEFISGLDIFERINTSAFELNERE----IVSYVHQVCEALQF 117

Query: 199 IH------------NCIVDQL----VEII-----KVLGTPTREEIKCMNPNYTEFKFPQI 237
           +H            N I        ++II     + L       +    P Y   +  Q 
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH 177

Query: 238 KP---------------------HPW---------HKVFQKRLPP----------EAVDL 257
                                  +P+           +                 EA+D 
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 258 VCRFFQYSPNLRCTALEACVHPFFDE 283
           V R        R TA EA  HP+  +
Sbjct: 238 VDRLLVKERKSRMTASEALQHPWLKQ 263

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.7 bits (230), Expect = 2e-22
 Identities = 50/259 (19%), Positives = 86/259 (33%), Gaps = 69/259 (26%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
           +     +G G FG V+ A+ +++  I+A+K + + +  K        RE++I   L HPN
Sbjct: 8   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 67

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           I+ L   F    D   +Y  L+LEY P           +   +        Y  ++  AL
Sbjct: 68  ILRLYGYF---HDATRVY--LILEYAP---LGTVYRELQKLSKFDEQRTATYITELANAL 119

Query: 197 AYIH------------NCIVDQLVEI------IKVLGTPTREEIKCMNPNYT-------- 230
           +Y H            N ++    E+        V    +R    C   +Y         
Sbjct: 120 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179

Query: 231 ---------------------EFKFPQIKPHPWHK-------VFQKRLPPEAVDLVCRFF 262
                                +  F        +K        F   +   A DL+ R  
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLL 239

Query: 263 QYSPNLRCTALEACVHPFF 281
           +++P+ R    E   HP+ 
Sbjct: 240 KHNPSQRPMLREVLEHPWI 258

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 3e-22
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 13/126 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           +     +G G++G V  A  R T E VA+K V   +         +E+ I +ML+H N+V
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
                             L LEY          +       MP    + + +Q+   + Y
Sbjct: 67  KFYGHRREGN-----IQYLFLEYCS---GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118

Query: 199 IHNCIV 204
           +H   +
Sbjct: 119 LHGIGI 124

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 5e-06
 Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 215 GTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALE 274
           G    ++       Y+++K  +   +PW K+         + L+ +    +P+ R T  +
Sbjct: 202 GELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-----DSAPLALLHKILVENPSARITIPD 256

Query: 275 ACVHPFFDE 283
                ++++
Sbjct: 257 IKKDRWYNK 265

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 92.4 bits (229), Expect = 5e-22
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 13/126 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
           Y    V+GTG+F  V  A+ + T ++VAIK + +            E+ ++  + HPNIV
Sbjct: 11  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 70

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           AL   +        LY  L+++ V         +                 +Q+  A+ Y
Sbjct: 71  ALDDIY---ESGGHLY--LIMQLVS---GGELFDRIVEKGFYTERDASRLIFQVLDAVKY 122

Query: 199 IHNCIV 204
           +H+  +
Sbjct: 123 LHDLGI 128

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 1e-21
 Identities = 38/266 (14%), Positives = 81/266 (30%), Gaps = 69/266 (25%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN----------RELQIMQMLD 133
           Y    ++G+G FG V+          VAIK V +D+               E+ +++ + 
Sbjct: 6   YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65

Query: 134 --HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQ 191
                ++ L   F            L+LE       +   ++      +     + + +Q
Sbjct: 66  SGFSGVIRLLDWFE-----RPDSFVLILERPEP--VQDLFDFITERGALQEELARSFFWQ 118

Query: 192 ICRALAYIH------------NCIVDQLVEIIKVL-----------------GTPTREEI 222
           +  A+ + H            N ++D     +K++                 GT      
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 178

Query: 223 KCMNPNYTEFKFPQIKP------------HPW---------HKVFQKRLPPEAVDLVCRF 261
           + +  +    +   +               P+            F++R+  E   L+   
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWC 238

Query: 262 FQYSPNLRCTALEACVHPFFDELRDP 287
               P+ R T  E   HP+  ++  P
Sbjct: 239 LALRPSDRPTFEEIQNHPWMQDVLLP 264

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 7e-21
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 11/122 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIMQMLDHPNIVA 139
           +     +G G+FG V++A+ +ET  + A K +     ++      E+ I+   DHPNIV 
Sbjct: 14  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 73

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           L   F     +  L+  +++E+       +      + + +    +++   Q   AL Y+
Sbjct: 74  LLDAF---YYENNLW--ILIEFCAG--GAVDAVMLELERPLTESQIQVVCKQTLDALNYL 126

Query: 200 HN 201
           H+
Sbjct: 127 HD 128

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 9/45 (20%), Positives = 15/45 (33%)

Query: 237 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFF 281
            K  P       R      D + +  + + + R T  +   HPF 
Sbjct: 228 AKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.3 bits (218), Expect = 9e-21
 Identities = 28/125 (22%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPN 136
           Y    ++G G    V  A+       VA+K +  D            RE Q    L+HP 
Sbjct: 9   YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 68

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           IVA+ +              +V+EYV        R+       M            C+AL
Sbjct: 69  IVAV-YDTGEAETPAGPLPYIVMEYVD---GVTLRDIVHTEGPMTPKRAIEVIADACQAL 124

Query: 197 AYIHN 201
            + H 
Sbjct: 125 NFSHQ 129

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 1e-20
 Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 12/126 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     VG+G++G V  A    TG  VAIKK+ +  + +       REL++++ + H N+
Sbjct: 20  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 79

Query: 138 VALKHCFFSTTDKEELY-LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           + L   F      ++     LV+ ++   + ++ +     H+++    ++   YQ+ + L
Sbjct: 80  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK-----HEKLGEDRIQFLVYQMLKGL 134

Query: 197 AYIHNC 202
            YIH  
Sbjct: 135 RYIHAA 140

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 3e-13
 Identities = 37/195 (18%), Positives = 70/195 (35%), Gaps = 15/195 (7%)

Query: 116 LQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV--LEYVPETVNRIARNY 173
           +      +R+L+   +  + +       F      +      V    Y    V      Y
Sbjct: 137 IHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRY 196

Query: 174 SR---IHQRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYT 230
           ++   I     ++        I     +  +  +DQL EI+KV GTP  E ++ +  +  
Sbjct: 197 TQTVDIWSVGCIMA-----EMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 251

Query: 231 EF---KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP 287
           +      P+++   +  +      P AV+L+ +        R TA EA  HP+F+ L D 
Sbjct: 252 KNYMKGLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 310

Query: 288 NTRLPNGRPLPPLFN 302
               P  +     F+
Sbjct: 311 E-DEPQVQKYDDSFD 324

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (218), Expect = 1e-20
 Identities = 37/128 (28%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-------NRELQIMQMLDHPN 136
           +    ++G GSF  V  A+   T    AIK + +    K        RE  +M  LDHP 
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
            V L   F    D E+LY    L Y     N     Y R          + YT +I  AL
Sbjct: 70  FVKLYFTF---QDDEKLY--FGLSYAK---NGELLKYIRKIGSFDETCTRFYTAEIVSAL 121

Query: 197 AYIHNCIV 204
            Y+H   +
Sbjct: 122 EYLHGKGI 129

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 17/70 (24%)

Query: 246 FQKRLPPEAVDLVCRFFQYSPNLRCTALEACV------HPFFDELRDPNTRLPNGRPLPP 299
           F ++  P+A DLV +        R    E         HPFF+ +   N           
Sbjct: 229 FPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN----------- 277

Query: 300 LFNFKPPELS 309
           L    PP+L+
Sbjct: 278 LHQQTPPKLT 287

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.6 bits (219), Expect = 1e-20
 Identities = 59/321 (18%), Positives = 105/321 (32%), Gaps = 87/321 (27%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-------LQDKRYKNRELQIMQMLDHPN 136
           +     +GTGSFG V   + R  G   A+K +       L+   + N E  ++ ++ HP 
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           I+ +   F     ++   + ++++Y+         +  R  QR P    K Y  ++C AL
Sbjct: 66  IIRMWGTF-----QDAQQIFMIMDYIE---GGELFSLLRKSQRFPNPVAKFYAAEVCLAL 117

Query: 197 AYIH------------NCIVDQ-----LVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKP 239
            Y+H            N ++D+     + +       P      C  P+Y   +    KP
Sbjct: 118 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177

Query: 240 ---------------------HPWHK---------------VFQKRLPPEAVDLVCRFFQ 263
                                 P++                 F      +  DL+ R   
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLIT 237

Query: 264 YSPNLRC-----TALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGI------- 311
              + R         +   HP+F E+     +L +     P   ++PP   G        
Sbjct: 238 RDLSQRLGNLQNGTEDVKNHPWFKEV--VWEKLLSRNIETP---YEPPIQQGQGDTSQFD 292

Query: 312 --PPETINRLIPEHARKQNLF 330
             P E IN  +       +LF
Sbjct: 293 KYPEEDINYGVQGEDPYADLF 313

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 88.0 bits (217), Expect = 2e-20
 Identities = 52/251 (20%), Positives = 100/251 (39%), Gaps = 16/251 (6%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYK-NRELQIMQML-DHPNIVALK 141
           Y     +G G +  VF+A      E V +K +   K+ K  RE++I++ L   PNI+ L 
Sbjct: 37  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 96

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
                  D       LV E+V  T      ++ +++Q +    ++ Y Y+I +AL Y H 
Sbjct: 97  DIV---KDPVSRTPALVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDYCHS 147

Query: 201 NCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCR 260
             I+ + V+   V+      +++ ++    EF  P  + +        + P   VD    
Sbjct: 148 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY 207

Query: 261 FFQ---YSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIP-PETI 316
            +    +S      ++     PFF    + +  +   + L     +   +   I      
Sbjct: 208 DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 267

Query: 317 NRLIPEHARKQ 327
           N ++  H+RK+
Sbjct: 268 NDILGRHSRKR 278

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 58.7 bits (141), Expect = 2e-10
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP--------PEAV 255
            DQLV I KVLGT    +         + +F  I      K +++ +         PEA+
Sbjct: 237 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEAL 296

Query: 256 DLVCRFFQYSPNLRCTALEACVHPFFDELR 285
           D + +  +Y    R TA EA  HP+F  + 
Sbjct: 297 DFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 88.3 bits (218), Expect = 2e-20
 Identities = 45/296 (15%), Positives = 86/296 (29%), Gaps = 86/296 (29%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------RYKNRELQIMQMLD 133
           +    ++G G FG V+  +  +TG++ A+K + + +            +   L ++   D
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
            P IV + + F      ++L    +L+ +          +   H       ++ Y  +I 
Sbjct: 66  CPFIVCMSYAF---HTPDKLS--FILDLMN---GGDLHYHLSQHGVFSEADMRFYAAEII 117

Query: 194 RALAYIH------------NCIVDQLVEI------IKVLGTPTREEIKCMNPNYT----- 230
             L ++H            N ++D+   +      +    +  +         Y      
Sbjct: 118 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVL 177

Query: 231 -------------------------EFKFPQIKPHPWHKVFQK----------RLPPEAV 255
                                       F Q K    H++ +              PE  
Sbjct: 178 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 237

Query: 256 DLVCRFFQYSPNLRCT-----ALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP 306
            L+    Q   N R       A E    PFF  L      +   +  PP     PP
Sbjct: 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL--DWQMVFLQKYPPP---LIPP 288

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 86.8 bits (214), Expect = 4e-20
 Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 18/134 (13%)

Query: 71  IGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQI 128
           +G R         Y     +G+GSFG ++       GE VAIK      ++     E +I
Sbjct: 5   VGNR---------YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI 55

Query: 129 MQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY 188
            +M+     +       +  D    Y  +V+E +  ++  +   ++   ++  L  V L 
Sbjct: 56  YKMMQGGVGIPTIRWCGAEGD----YNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLL 108

Query: 189 TYQICRALAYIHNC 202
             Q+   + YIH+ 
Sbjct: 109 ADQMISRIEYIHSK 122

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 5e-20
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 15/130 (11%)

Query: 76  GNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV----LQDKRYKNRELQIMQM 131
           G+ K+K  Y     +G G+ G V+ A    TG+ VAI+++       K     E+ +M+ 
Sbjct: 16  GDPKKK--YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73

Query: 132 LDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQ 191
             +PNIV     +      +EL+  +V+EY+                 M    +     +
Sbjct: 74  NKNPNIVNYLDSY---LVGDELW--VVMEYLAGGSLT----DVVTETCMDEGQIAAVCRE 124

Query: 192 ICRALAYIHN 201
             +AL ++H+
Sbjct: 125 CLQALEFLHS 134

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 4e-04
 Identities = 9/56 (16%), Positives = 16/56 (28%)

Query: 237 IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLP 292
                      ++L     D + R        R +A E   H F    +  ++  P
Sbjct: 229 ATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTP 284

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 7e-20
 Identities = 42/209 (20%), Positives = 74/209 (35%), Gaps = 26/209 (12%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---------RELQIMQMLDHPNIVA 139
            +G G F  V++A+ + T +IVAIKK+    R +          RE++++Q L HPNI+ 
Sbjct: 5   FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 64

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           L   F     K  +   LV +++      +          +   ++K Y     + L Y+
Sbjct: 65  LLDAF---GHKSNIS--LVFDFME---TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 116

Query: 200 HNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVC 259
           H   +         L       +K  +    +      + +    V +    PE   L+ 
Sbjct: 117 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPE---LLF 173

Query: 260 RFFQYSP-----NLRCTALE-ACVHPFFD 282
               Y        + C   E     PF  
Sbjct: 174 GARMYGVGVDMWAVGCILAELLLRVPFLP 202

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 9e-14
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 3/103 (2%)

Query: 192 ICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP 251
           + R      +  +DQL  I + LGTPT E+   M        F      P H +F     
Sbjct: 195 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF-SAAG 253

Query: 252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDP--NTRLP 292
            + +DL+   F ++P  R TA +A    +F     P    +LP
Sbjct: 254 DDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLP 296

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 2e-19
 Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 10/123 (8%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV--LQDKRYKN---RELQIMQMLDHPNIV 138
           Y     +G G++G+V  A        VAIKK+   + + Y     RE++I+    H NI+
Sbjct: 10  YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 69

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
            +     + T ++   + LV   +   + ++ +      Q +   ++  + YQI R L Y
Sbjct: 70  GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK-----TQHLSNDHICYFLYQILRGLKY 124

Query: 199 IHN 201
           IH+
Sbjct: 125 IHS 127

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 2e-17
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 190 YQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCM---NPNYTEFKFPQIKPHPWHKVF 246
             +     +     +DQL  I+ +LG+P++E++ C+            P     PW+++F
Sbjct: 205 EMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLF 264

Query: 247 QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP 306
                 +A+DL+ +   ++P+ R    +A  HP+ ++  DP+       P+         
Sbjct: 265 -PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD-----EPIAEAPFKFDM 318

Query: 307 ELSGIPPETINRLIPEHARK 326
           EL  +P E +  LI E   +
Sbjct: 319 ELDDLPKEKLKELIFEETAR 338

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 3e-19
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 9/117 (7%)

Query: 88  HVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQIMQMLDHPNIVALKHCFF 145
             +G G FG V        G  VA+K +  D   +    E  +M  L H N+V L     
Sbjct: 13  QTIGKGEFGDVM--LGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIV 70

Query: 146 STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
                    L +V EY+ +  + +    SR    +    +  ++  +C A+ Y+   
Sbjct: 71  EEKG----GLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 122

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 1e-18
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 10/125 (8%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV------LQDKRYKNRELQIMQMLDHPNI 137
           Y     VG+G++G V  A   +TG  VA+KK+      +   +   REL++++ + H N+
Sbjct: 20  YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           + L   F      EE     ++ ++         N     Q++   +V+   YQI R L 
Sbjct: 80  IGLLDVFTPARSLEEFNDVYLVTHLMGADL----NNIVKCQKLTDDHVQFLIYQILRGLK 135

Query: 198 YIHNC 202
           YIH+ 
Sbjct: 136 YIHSA 140

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 7e-15
 Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 10/136 (7%)

Query: 190 YQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEF---KFPQIKPHPWHKVF 246
             +     +     +DQL  I++++GTP  E +K ++            Q+    +  VF
Sbjct: 211 ELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVF 270

Query: 247 QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP 306
                P AVDL+ +      + R TA +A  H +F +  DP+       P+   ++    
Sbjct: 271 -IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDD-----EPVADPYDQ-SF 323

Query: 307 ELSGIPPETINRLIPE 322
           E   +  +    L  +
Sbjct: 324 ESRDLLIDEWKSLTYD 339

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 2e-18
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 12/128 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     +G G+FG VF+A+ R+TG+ VA+KKVL +   +       RE++I+Q+L H N+
Sbjct: 12  YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 71

Query: 138 VALKHCFFSTT---DKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           V L     +     ++ +  + LV ++     + +A   S +  +  L  +K     +  
Sbjct: 72  VNLIEICRTKASPYNRCKGSIYLVFDFCE---HDLAGLLSNVLVKFTLSEIKRVMQMLLN 128

Query: 195 ALAYIHNC 202
            L YIH  
Sbjct: 129 GLYYIHRN 136

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 9e-10
 Identities = 21/100 (21%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 192 ICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHP---WHKVFQK 248
             R+     N    QL  I ++ G+ T E    ++      K   +K        ++   
Sbjct: 216 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAY 275

Query: 249 RLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN 288
              P A+DL+ +     P  R  + +A  H FF     P+
Sbjct: 276 VRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPS 315

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (201), Expect = 3e-18
 Identities = 26/131 (19%), Positives = 55/131 (41%), Gaps = 18/131 (13%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN----------RELQIMQMLD 133
           Y     +G+G F VV + + + TG   A K + + +   +          RE+ I++ + 
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           HPN++ L   +    +K ++   L+LE V         ++    + +       +  QI 
Sbjct: 72  HPNVITLHEVY---ENKTDVI--LILELVA---GGELFDFLAEKESLTEEEATEFLKQIL 123

Query: 194 RALAYIHNCIV 204
             + Y+H+  +
Sbjct: 124 NGVYYLHSLQI 134

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 1/62 (1%)

Query: 239 PHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLP 298
            + +   +       A D + R     P  R T  ++  HP+    +D    L +    P
Sbjct: 232 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP-KDTQQALSSAWSHP 290

Query: 299 PL 300
             
Sbjct: 291 QF 292

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.4 bits (200), Expect = 4e-18
 Identities = 52/297 (17%), Positives = 92/297 (30%), Gaps = 84/297 (28%)

Query: 81  KVS---YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQ 130
           KV+   +    ++G G+FG V   + + TG   A+K + ++             E +++Q
Sbjct: 1   KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60

Query: 131 MLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTY 190
              HP + ALK+ F      + L        +          +    +       + Y  
Sbjct: 61  NTRHPFLTALKYAF---QTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGA 112

Query: 191 QICRALAYIH------------NCIVDQLVEI--------IKVLGTPTREEIKCMNPNYT 230
           +I  AL Y+H            N ++D+   I         + +      +  C  P Y 
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYL 172

Query: 231 EFKFPQIKPH---------------------PWHKV---------------FQKRLPPEA 254
             +  +   +                     P++                 F + L PEA
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA 232

Query: 255 VDLVCRFFQYSPNLR-----CTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP 306
             L+    +  P  R       A E   H FF  +      +   + LPP   FKP 
Sbjct: 233 KSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN--WQDVVQKKLLPP---FKPQ 284

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.1 bits (194), Expect = 2e-17
 Identities = 37/127 (29%), Positives = 69/127 (54%), Gaps = 13/127 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           +     +G G++GVV++A+ + TGE+VA+KK+  D   +       RE+ +++ L+HPNI
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L         + +LY  LV E++ + + +     +     +PL  +K Y +Q+ + LA
Sbjct: 64  VKLLDVI---HTENKLY--LVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLA 116

Query: 198 YIHNCIV 204
           + H+  V
Sbjct: 117 FCHSHRV 123

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 4e-13
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 192 ICRALAYIHNCIVDQLVEIIKVLGTPTREEIK-CMNPNYTEFKFPQIKPHPWHKVFQKRL 250
           + R   +  +  +DQL  I + LGTP         +    +  FP+     + KV    L
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVV-PPL 255

Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGR 295
             +   L+ +   Y PN R +A  A  HPFF ++  P   +P+ R
Sbjct: 256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP---VPHLR 297

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.6 bits (195), Expect = 2e-17
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     +G+G+ G+V  A        VAIKK+ +  + +       REL +M+ ++H NI
Sbjct: 19  YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78

Query: 138 VALKHCFFSTTDKEEL-YLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           ++L + F      EE   + LV+E +       A     I   +    +    YQ+   +
Sbjct: 79  ISLLNVFTPQKTLEEFQDVYLVMELMD------ANLCQVIQMELDHERMSYLLYQMLCGI 132

Query: 197 AYIHNC 202
            ++H+ 
Sbjct: 133 KHLHSA 138

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.5 bits (161), Expect = 6e-13
 Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 17/147 (11%)

Query: 187 LYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCM----------NPNYTEFKFPQ 236
           +    +   + +     +DQ  ++I+ LGTP  E +K +           P Y    FP+
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK 266

Query: 237 IKP---HPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPN 293
           + P    P      K    +A DL+ +     P  R +  +A  HP+ +   DP      
Sbjct: 267 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA- 325

Query: 294 GRPLPPLFNFKPPELSGIPPETINRLI 320
             P P +++ +  E      E    LI
Sbjct: 326 --PPPQIYDKQLDERE-HTIEEWKELI 349

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 2e-17
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 16/127 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQ--------IMQMLDHP 135
           +I   ++G GSFG VF A+ ++T +  AIK + +D    + +++        +    +HP
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
            +  +   F     KE L+    +EY+          + +   +  L     Y  +I   
Sbjct: 64  FLTHMFCTF---QTKENLFFV--MEYLN---GGDLMYHIQSCHKFDLSRATFYAAEIILG 115

Query: 196 LAYIHNC 202
           L ++H+ 
Sbjct: 116 LQFLHSK 122

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 13/96 (13%)

Query: 246 FQKRLPPEAVDLVCRFFQYSPNLRCTALEACV-HPFFDELRDPNTRLPNGRPLPP----- 299
           + + L  EA DL+ + F   P  R         HP F E+      L      PP     
Sbjct: 222 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN--WEELERKEIDPPFRPKV 279

Query: 300 -----LFNFKPPELSGIPPETINRLIPEHARKQNLF 330
                  NF    L+  P  +       ++  QN+F
Sbjct: 280 KSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMF 315

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 78.6 bits (193), Expect = 2e-17
 Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 22/133 (16%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKV-------------LQDKRYKNRELQIMQ 130
           Y  + ++G G   VV +   + T +  A+K +              + +    +E+ I++
Sbjct: 5   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 64

Query: 131 ML-DHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYT 189
            +  HPNI+ LK  +     +   +  LV + +         +Y      +     +   
Sbjct: 65  KVSGHPNIIQLKDTY-----ETNTFFFLVFDLMK---KGELFDYLTEKVTLSEKETRKIM 116

Query: 190 YQICRALAYIHNC 202
             +   +  +H  
Sbjct: 117 RALLEVICALHKL 129

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 41.2 bits (96), Expect = 9e-05
 Identities = 15/36 (41%), Positives = 16/36 (44%)

Query: 248 KRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDE 283
                   DLV RF    P  R TA EA  HPFF +
Sbjct: 240 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 3e-17
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVAL 140
                 +G G FG V+          VA+K + Q     +    E  +M+ L H  +V L
Sbjct: 15  LKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL 73

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                    +E +Y  ++ EY+    + +    +    ++ +  +     QI   +A+I 
Sbjct: 74  YAVV----TQEPIY--IITEYMENG-SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126

Query: 201 NC 202
             
Sbjct: 127 ER 128

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.7 bits (193), Expect = 4e-17
 Identities = 48/278 (17%), Positives = 81/278 (29%), Gaps = 76/278 (27%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIVALK 141
            +GTGSFG V   K +E+G   A+K + + K  K         E +I+Q ++ P +V L+
Sbjct: 48  TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107

Query: 142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH- 200
             F   ++   +   +    +   + R          R    + + Y  QI     Y+H 
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRR--------IGRFSEPHARFYAAQIVLTFEYLHS 159

Query: 201 -----------NCIVDQLVEI--------------------------------------- 210
                      N ++DQ   I                                       
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAV 219

Query: 211 -IKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKV-FQKRLPPEAVDLVCRFFQYSP-- 266
               LG    E      P + +      +     KV F      +  DL+    Q     
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTK 279

Query: 267 ---NLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLF 301
              NL+    +   H +F      +      R +   F
Sbjct: 280 RFGNLKNGVNDIKNHKWF---ATTDWIAIYQRKVEAPF 314

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.0 bits (191), Expect = 5e-17
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 12/129 (9%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRET-GEIVAIKKVLQDKRYKN------RELQIMQML---D 133
           Y     +G G++G VF+A+  +  G  VA+K+V      +       RE+ +++ L   +
Sbjct: 9   YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           HPN+V L      +    E  L LV E+V +  +            +P   +K   +Q+ 
Sbjct: 69  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ--DLTTYLDKVPEPGVPTETIKDMMFQLL 126

Query: 194 RALAYIHNC 202
           R L ++H+ 
Sbjct: 127 RGLDFLHSH 135

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 5e-11
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 2/94 (2%)

Query: 192 ICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLP 251
             R   +  +  VDQL +I+ V+G P  E+    +       F      P  K     + 
Sbjct: 209 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP-RDVALPRQAFHSKSAQPIEKFV-TDID 266

Query: 252 PEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR 285
               DL+ +   ++P  R +A  A  HP+F +L 
Sbjct: 267 ELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 300

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.7 bits (188), Expect = 1e-16
 Identities = 41/263 (15%), Positives = 86/263 (32%), Gaps = 70/263 (26%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVAL 140
              +H +G G +G V++   ++    VA+K + +D        +E  +M+ + HPN+V L
Sbjct: 19  ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 78

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                  T +   Y+    E++               Q +  + +     QI  A+ Y+ 
Sbjct: 79  LGVC---TREPPFYII--TEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLE 132

Query: 201 ------------NCIVDQ--------------LVEIIKVLGTPTREEIKCMNPNYTEFK- 233
                       NC+V +              +           +  IK   P    +  
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNK 192

Query: 234 ------------------------FPQIKPHPWHKVFQKRL--------PPEAVDLVCRF 261
                                   +P I     +++ +K          P +  +L+   
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 252

Query: 262 FQYSPNLRCTALEACVHPFFDEL 284
           +Q++P+ R +  E  +H  F+ +
Sbjct: 253 WQWNPSDRPSFAE--IHQAFETM 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 2e-16
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 85  IAEHVVGTGSFGVVFQAKCRETGE--IVAIKKVLQDKRYKN-----RELQIMQMLDHPNI 137
           IA+  +G G+FG V Q   R   +   VAIK + Q     +     RE QIM  LD+P I
Sbjct: 12  IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 71

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L          +   L LV+E        + +      + +P+  V    +Q+   + 
Sbjct: 72  VRLIGVC------QAEALMLVMEMAGGGP--LHKFLVGKREEIPVSNVAELLHQVSMGMK 123

Query: 198 YIHN 201
           Y+  
Sbjct: 124 YLEE 127

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.1 bits (186), Expect = 2e-16
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     +G G++G VF+AK RET EIVA+K+V  D   +       RE+ +++ L H NI
Sbjct: 4   YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L           +  L LV E+       + + +   +  +    VK + +Q+ + L 
Sbjct: 64  VRLHDVL-----HSDKKLTLVFEFCD---QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115

Query: 198 YIHNCIV 204
           + H+  V
Sbjct: 116 FCHSRNV 122

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (164), Expect = 2e-13
 Identities = 25/90 (27%), Positives = 38/90 (42%)

Query: 198 YIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL 257
           +  N + DQL  I ++LGTPT E+   M        +P             +L     DL
Sbjct: 203 FPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDL 262

Query: 258 VCRFFQYSPNLRCTALEACVHPFFDELRDP 287
           +    + +P  R +A EA  HP+F +   P
Sbjct: 263 LQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.9 bits (186), Expect = 3e-16
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 15/130 (11%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVL-----QDKRYKNRELQIMQMLDH 134
               E V+G G FG V     +  G+    VAIK +      + +R    E  IM   DH
Sbjct: 27  CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86

Query: 135 PNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICR 194
           PN++ L+      T    +   ++ E++      +     +   +  +I +      I  
Sbjct: 87  PNVIHLEGVV---TKSTPVM--IITEFMEN--GSLDSFLRQNDGQFTVIQLVGMLRGIAA 139

Query: 195 ALAYIHNCIV 204
            + Y+ +   
Sbjct: 140 GMKYLADMNY 149

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 75.2 bits (184), Expect = 4e-16
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 18/134 (13%)

Query: 71  IGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN--RELQI 128
           +G           Y     +G GSFGV+F+       + VAIK   +         E + 
Sbjct: 3   VGVH---------YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT 53

Query: 129 MQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLY 188
            ++L     +   + F      E L+  LV++ +  ++  +     R   +  +  V + 
Sbjct: 54  YKLLAGCTGIPNVYYFGQ----EGLHNVLVIDLLGPSLEDLLDLCGR---KFSVKTVAMA 106

Query: 189 TYQICRALAYIHNC 202
             Q+   +  IH  
Sbjct: 107 AKQMLARVQSIHEK 120

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 74.5 bits (182), Expect = 7e-16
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPNI 137
           Y     +G G++GVV++A+    GE  A+KK+  +K  +       RE+ I++ L H NI
Sbjct: 4   YHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62

Query: 138 VALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALA 197
           V L           +  L LV E++      + +        +  +  K +  Q+   +A
Sbjct: 63  VKLYDVIH-----TKKRLVLVFEHLD---QDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114

Query: 198 YIHN 201
           Y H+
Sbjct: 115 YCHD 118

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 59.5 bits (143), Expect = 7e-11
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 2/81 (2%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPN-YTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFF 262
            DQL+ I ++LGTP  +    +      +  F   +P PW     K L    +DL+ +  
Sbjct: 207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL-KGLDESGIDLLSKML 265

Query: 263 QYSPNLRCTALEACVHPFFDE 283
           +  PN R TA +A  H +F E
Sbjct: 266 KLDPNQRITAKQALEHAYFKE 286

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 7e-16
 Identities = 24/145 (16%), Positives = 46/145 (31%), Gaps = 31/145 (21%)

Query: 84  YIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDKRYKN-----RELQIMQML- 132
                 +G G+FG V +A        +    VA+K +              EL+++  L 
Sbjct: 25  LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG 84

Query: 133 DHPNIVALKHCFFSTTDKEELYLNLVLEYVP---------------ETVNRIARNYSRIH 177
           +H NIV L       T        ++ EY                               
Sbjct: 85  NHMNIVNLLGAC---TIGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139

Query: 178 QRMPLIYVKLYTYQICRALAYIHNC 202
             + L  +  ++YQ+ + +A++ + 
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASK 164

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 7e-16
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVAL 140
                 +GTG FGVV   K R     VAIK + +    ++    E ++M  L H  +V L
Sbjct: 6   LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQL 64

Query: 141 KHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 200
                  T +  ++  ++ EY+      +      +  R     +      +C A+ Y+ 
Sbjct: 65  YGVC---TKQRPIF--IITEYMAN--GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117

Query: 201 NCIV 204
           +   
Sbjct: 118 SKQF 121

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 1e-15
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 10/128 (7%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKR---YKNRELQIMQMLDHPNIVA 139
           + + +  +G G FG V+  + +  GE VA+K     +    ++  E+    ML H NI+ 
Sbjct: 4   TIVLQESIGKGRFGEVW--RGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
                 +  +     L LV +Y     +    +Y      + +  +          LA++
Sbjct: 62  F-IAADNKDNGTWTQLWLVSDYHE---HGSLFDYLN-RYTVTVEGMIKLALSTASGLAHL 116

Query: 200 HNCIVDQL 207
           H  IV   
Sbjct: 117 HMEIVGTQ 124

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 3e-15
 Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 85  IAEHVVGTGSFGVVFQAKCR--ETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPN 136
           + +  +G+G+FG V +   +  +  + VA+K +  +            E  +MQ LD+P 
Sbjct: 10  LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPY 69

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           IV +        + E     LV+E            Y + ++ +    +    +Q+   +
Sbjct: 70  IVRMIGIC----EAESWM--LVMEMAE---LGPLNKYLQQNRHVKDKNIIELVHQVSMGM 120

Query: 197 AYIHNC 202
            Y+   
Sbjct: 121 KYLEES 126

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 73.5 bits (179), Expect = 3e-15
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 15/131 (11%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVAL 140
           YI    +G G F  V+ AK       VA+K V  DK Y      E++++Q ++  +    
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 74

Query: 141 KH----------CFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTY 190
                         F+      +++ +V E + E +  + + Y   H+ +PLIYVK  + 
Sbjct: 75  DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISK 132

Query: 191 QICRALAYIHN 201
           Q+   L Y+H 
Sbjct: 133 QLLLGLDYMHR 143

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.6 bits (161), Expect = 7e-13
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 20/118 (16%)

Query: 204 VDQLVEIIKVLGTPTREEIKCMNPNYTEF-------KFPQIKPHPWHKV------FQKRL 250
            D + +II++LG      ++      T F          ++K  P   V      F K  
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300

Query: 251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFF------DELRDPNTRL-PNGRPLPPLF 301
             E  D +    Q  P  R  A     HP+       +E+R P+  L  +G  +P  F
Sbjct: 301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 358

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 8e-15
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 11/119 (9%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVALKHCFF 145
            +G+G FG+V         + VAIK + +    +     E ++M  L HP +V L     
Sbjct: 12  EIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC- 69

Query: 146 STTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV 204
              ++  +   LV E++      ++              +      +C  +AY+    V
Sbjct: 70  --LEQAPIC--LVFEFMEH--GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.9 bits (173), Expect = 1e-14
 Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 18/124 (14%)

Query: 89  VVGTGSFGVVFQAKCRET---GEIVAIKKVLQDKRYKN-------RELQIMQMLDHPNIV 138
            +G GSFGVV + +          VA+K +  D   +        RE+  M  LDH N++
Sbjct: 15  KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
            L              + +V E  P     +     +      L  +  Y  Q+   + Y
Sbjct: 75  RLYGVV------LTPPMKMVTELAPL--GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGY 126

Query: 199 IHNC 202
           + + 
Sbjct: 127 LESK 130

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (172), Expect = 1e-14
 Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 18/129 (13%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN------RELQIMQMLDHPN 136
                  +G+GSFG V++ K       VA+K +               E+ +++   H N
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65

Query: 137 IVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRAL 196
           I+                L +V ++   +   +  +   I  +  +I +     Q  + +
Sbjct: 66  ILLFMGYS------TAPQLAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGM 117

Query: 197 AYIH-NCIV 204
            Y+H   I+
Sbjct: 118 DYLHAKSII 126

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 3e-14
 Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 16/127 (12%)

Query: 84  YIAEHVVGTGSFGVVFQAKCR---ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHP 135
                 +G G FG V Q            VAIK               +E   M+  DHP
Sbjct: 9   IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68

Query: 136 NIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRA 195
           +IV L           E  + +++E        +          + L  + LY YQ+  A
Sbjct: 69  HIVKLIGVI------TENPVWIIMELCTL--GELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 196 LAYIHNC 202
           LAY+ + 
Sbjct: 121 LAYLESK 127

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 4e-14
 Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 17/125 (13%)

Query: 89  VVGTGSFGVVFQAKCRETGE----IVAIKKVLQDKRYKN-----RELQIMQMLDHPNIVA 139
           V+G+G+FG V++      GE     VAIK++ +    K       E  +M  +D+P++  
Sbjct: 16  VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           L     ++T      + L+ + +P     +          +   Y+  +  QI + + Y+
Sbjct: 76  LLGICLTST------VQLITQLMPF--GCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127

Query: 200 HNCIV 204
            +  +
Sbjct: 128 EDRRL 132

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 1e-13
 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 36/150 (24%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGE-----IVAIKKVLQDKRYKN-----RELQIMQML- 132
                V+G+G+FG V  A      +      VA+K + +            EL++M  L 
Sbjct: 39  LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG 98

Query: 133 DHPNIVALKHCFFSTTDKEELYLNLVLEYVP--------------------ETVNRIARN 172
            H NIV L       T    +Y  L+ EY                      E  N+    
Sbjct: 99  SHENIVNLLGAC---TLSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153

Query: 173 YSRIHQRMPLIYVKLYTYQICRALAYIHNC 202
                  +    +  + YQ+ + + ++   
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFK 183

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 1e-13
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 11/125 (8%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKN---RELQIMQMLDHPNIVA 139
           S   E  +G G FG V+      T   VAIK +           +E Q+M+ L H  +V 
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 76

Query: 140 LKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYI 199
           L         +E +Y  +V EY+ +             + + L  +     QI   +AY+
Sbjct: 77  LYAVV----SEEPIY--IVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYV 129

Query: 200 HNCIV 204
                
Sbjct: 130 ERMNY 134

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 1e-12
 Identities = 21/142 (14%), Positives = 48/142 (33%), Gaps = 28/142 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD------KRYKNRELQIMQML 132
                 +G G+FG V +A         T   VA+K + +       +   +    ++ + 
Sbjct: 15  LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 74

Query: 133 DHPNIVALKHCFFSTTDKEELYLNLVLEYVP-------------ETVNRIARNYSRIHQR 179
            H N+V L              L +++E+               E V             
Sbjct: 75  HHLNVVNLLGACTKPGG----PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 130

Query: 180 MPLIYVKLYTYQICRALAYIHN 201
           + L ++  Y++Q+ + + ++ +
Sbjct: 131 LTLEHLICYSFQVAKGMEFLAS 152

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 2e-12
 Identities = 45/268 (16%), Positives = 87/268 (32%), Gaps = 53/268 (19%)

Query: 84  YIAEHVVGTGSFGVVFQAKCRETGE-------IVAIKKVLQDKRYKN-----RELQIMQM 131
            +    +G G+FG V  A+     +        VA+K +  D   K+      E+++M+M
Sbjct: 15  LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKM 74

Query: 132 L-DHPNIVALKHCFFSTTDKEELYLNLVLEYV-------------PETVNRIARNYSRIH 177
           +  H NI+   +   + T    LY  +++EY              P  +           
Sbjct: 75  IGKHKNII---NLLGACTQDGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129

Query: 178 QRMPLIYVKLYTYQICRALAYIHNCIVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQI 237
           +++    +    YQ+ R + Y+ +                   ++   N   TE    +I
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKC-------------IHRDLAARNVLVTEDNVMKI 176

Query: 238 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL 297
                 +          +D   +       ++  A EA     +    D       G  L
Sbjct: 177 ADFGLARDIHH------IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD---VWSFGVLL 227

Query: 298 PPLFNFKPPELSGIPPETINRLIPEHAR 325
             +F        G+P E + +L+ E  R
Sbjct: 228 WEIFTLGGSPYPGVPVEELFKLLKEGHR 255

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 2e-12
 Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 16/129 (12%)

Query: 83  SYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQDKRYKN-----RELQIMQMLD 133
               + V+G G FG V++   + +       VAIK +      K       E  IM    
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
           H NI+ L+         +   + ++ EY+        +          ++ +      I 
Sbjct: 68  HHNIIRLEGVIS-----KYKPMMIITEYMENGALD--KFLREKDGEFSVLQLVGMLRGIA 120

Query: 194 RALAYIHNC 202
             + Y+ N 
Sbjct: 121 AGMKYLANM 129

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 3e-12
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 14/126 (11%)

Query: 87  EHVVGTGSFGVVFQAKCRE---TGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
             V+G G FG V+     +        A+K + +            E  IM+   HPN++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAY 198
           +L      +    E    +VL Y+     R             +  +  +  Q+ + + +
Sbjct: 92  SLLGICLRS----EGSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKF 145

Query: 199 IHNCIV 204
           + +   
Sbjct: 146 LASKKF 151

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (155), Expect = 3e-12
 Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 21/137 (15%)

Query: 79  KQKVS---YIAEHVVGTGSFGVVFQAKC---RETGEIVAIKKV--------LQDKRYKNR 124
            +KV    +    V+GTG++G VF  +     +TG++ A+K +         +   +   
Sbjct: 18  AEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT 77

Query: 125 ELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIY 184
           E Q+++ +     +   H  F    + +L+L L      E    +++      +R     
Sbjct: 78  ERQVLEHIRQSPFLVTLHYAF--QTETKLHLILDYINGGELFTHLSQ-----RERFTEHE 130

Query: 185 VKLYTYQICRALAYIHN 201
           V++Y  +I  AL ++H 
Sbjct: 131 VQIYVGEIVLALEHLHK 147

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.002
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 10/74 (13%)

Query: 238 KPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLR-----CTALEACVHPFFDELRDPNTRLP 292
           +       + + +   A DL+ R     P  R       A E   H FF ++   +  L 
Sbjct: 247 RILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDD--LA 304

Query: 293 NGRPLPPLFNFKPP 306
             +   P   FKP 
Sbjct: 305 AKKVPAP---FKPV 315

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 5e-12
 Identities = 29/136 (21%), Positives = 51/136 (37%), Gaps = 26/136 (19%)

Query: 87  EHVVGTGSFGVVFQAKCRETGEI--VAIKKV-----LQDKRYKNRELQIMQML-DHPNIV 138
           + V+G G+FG V +A+ ++ G     AIK++       D R    EL+++  L  HPNI+
Sbjct: 15  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 74

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP-------------ETVNRIARNYSRIHQRMPLIYV 185
            L             YL L +EY P                +      +     +    +
Sbjct: 75  NLLGACEHRG-----YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 186 KLYTYQICRALAYIHN 201
             +   + R + Y+  
Sbjct: 130 LHFAADVARGMDYLSQ 145

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.0 bits (152), Expect = 7e-12
 Identities = 38/284 (13%), Positives = 82/284 (28%), Gaps = 88/284 (30%)

Query: 84  YIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKV-----LQDKRYKNRELQIMQMLD 133
                 +G GSFG+V++   +     E    VAIK V     ++++     E  +M+  +
Sbjct: 22  ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN 81

Query: 134 HPNIVALKHCFFSTTDKEELYLNLVLEYVPE-------TVNRIARNYSRIHQRMPLIYVK 186
             ++V L                +++E +            R A   + +     L  + 
Sbjct: 82  CHHVVRLLGVVSQGQ-----PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136

Query: 187 LYTYQICRALAYIH------------NCIVD--------------------QLVEIIKVL 214
               +I   +AY++            NC+V                        +  K L
Sbjct: 137 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

Query: 215 GTPTREEIKCMNPNYTEFKFPQI------------KPHPWHKVFQKRL------------ 250
                   + +                           P+  +  +++            
Sbjct: 197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 256

Query: 251 ----PPEAVDLVCRFFQYSPNLRCTA------LEACVHPFFDEL 284
               P    +L+   +QY+P +R +       ++  + P F E+
Sbjct: 257 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV 300

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.6 bits (151), Expect = 1e-11
 Identities = 29/145 (20%), Positives = 49/145 (33%), Gaps = 36/145 (24%)

Query: 89  VVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDKRYKN-----RELQIMQMLDHPNIV 138
            +G G+FG VFQA+       E   +VA+K + ++          RE  +M   D+PNIV
Sbjct: 20  DIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 79

Query: 139 ALKHCFFSTTDKEELYLNLVLEYVP---------------------ETVNRIARNYSRIH 177
                       + +   L+ EY+                        ++  AR  S   
Sbjct: 80  ---KLLGVCAVGKPMC--LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGP 134

Query: 178 QRMPLIYVKLYTYQICRALAYIHNC 202
             +          Q+   +AY+   
Sbjct: 135 PPLSCAEQLCIARQVAAGMAYLSER 159

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.2 bits (119), Expect = 5e-08
 Identities = 12/131 (9%), Positives = 31/131 (23%), Gaps = 28/131 (21%)

Query: 89  VVGTGSFGVVFQAKCRETGEIVAIKKV--------------LQDKRYKNRELQIMQMLDH 134
           ++G G    VF     E      +K                     + +         + 
Sbjct: 7   LMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65

Query: 135 PNIVALKHCFFSTT-DKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQIC 193
             +  L+          E     +++E             ++   R+ +         I 
Sbjct: 66  RALQKLQGLAVPKVYAWEGNA--VLMEL----------IDAKELYRVRVENPDEVLDMIL 113

Query: 194 RALAYIHNCIV 204
             +A  ++  +
Sbjct: 114 EEVAKFYHRGI 124

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.98
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.97
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.97
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.96
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.96
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.95
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.95
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.95
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.94
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.92
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.5
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.32
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	95.01
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	93.68

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=297.86  Aligned_cols=242  Identities=67%  Similarity=1.095  Sum_probs=188.1

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccEEEEEe
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELYLNLVL  159 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~~~iv~  159 (335)
                      ..+|+.+++||+|+||+||+|+++.+|+.||||++.++.....+|+.+|++++|||||+++++|..... .+..++||||
T Consensus        19 ~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred             cCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence            447999999999999999999999999999999998877778899999999999999999999976432 4567899999


Q ss_pred             ecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 019844          160 EYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------------  203 (335)
Q Consensus       160 e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------------  203 (335)
                      |||++++...+.........+++.+++.|+.||+.||+|||++|                                    
T Consensus        99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~  178 (350)
T d1q5ka_          99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP  178 (350)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSC
T ss_pred             eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcc
Confidence            99998777766655555678999999999999999999999998                                    


Q ss_pred             --------------------------------------------------cChHHhHhhhcCCCCHHHhhhhCCCCCCCC
Q 019844          204 --------------------------------------------------VDQLVEIIKVLGTPTREEIKCMNPNYTEFK  233 (335)
Q Consensus       204 --------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  233 (335)
                                                                        .+.+..+...+|++..+.+....+.+....
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~  258 (350)
T d1q5ka_         179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFK  258 (350)
T ss_dssp             CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCC
T ss_pred             cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhcc
Confidence                                                              111122222333333333434444444445


Q ss_pred             CCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcccCCCCCH
Q 019844          234 FPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPP  313 (335)
Q Consensus       234 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (335)
                      ++.....++.......+++++.+||.+||++||++|||+.|+|+||||+++..+...++.....+.+++|...++.. .+
T Consensus       259 ~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~  337 (350)
T d1q5ka_         259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSS-NP  337 (350)
T ss_dssp             CCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTTCCCTTSCCCCCCCCCCHHHHTT-CG
T ss_pred             ccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCCCCCCCCCCCCCccCCCCHhhccC-Cc
Confidence            55555666666666789999999999999999999999999999999999999888888888888888888655553 33


Q ss_pred             HHHhhcChHH
Q 019844          314 ETINRLIPEH  323 (335)
Q Consensus       314 ~~~~~~~~~~  323 (335)
                      +....+++.+
T Consensus       338 ~~~~~~~p~~  347 (350)
T d1q5ka_         338 PLATILIPPH  347 (350)
T ss_dssp             GGHHHHSCTT
T ss_pred             cccccCCCcc
Confidence            3344444443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=266.65  Aligned_cols=191  Identities=26%  Similarity=0.343  Sum_probs=143.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++++.||+|+||+||+|+++.+++.||+|++.+.       ...+.+|+.+|+.++|||||++++++     .+..+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF-----HDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEE-----EECCE
Confidence            5699999999999999999999999999999998632       24567999999999999999999999     55667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hHHhHh---------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QLVEII---------  211 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~~~~~---------  211 (335)
                      +|||||||+| +|.+++..    .+.+++..++.|+.||+.||+|||++|            ++ .....+         
T Consensus        81 ~~ivmEy~~~g~L~~~l~~----~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~  156 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  156 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCC
T ss_pred             EEEEEeecCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeec
Confidence            9999999995 99999986    567999999999999999999999998            00 000001         


Q ss_pred             ------hhcCCCC---HHHhhhhCCCCCCC----------------CCCCCCCC---------ccccccccCCChHHHHH
Q 019844          212 ------KVLGTPT---REEIKCMNPNYTEF----------------KFPQIKPH---------PWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       212 ------~~~g~~~---~~~~~~~~~~~~~~----------------~~~~~~~~---------~~~~~~~~~~s~~~~~l  257 (335)
                            ..+||+.   ||.+...  .|...                ..|.....         .....+|..+|+++++|
T Consensus       157 ~~~~~~~~~Gt~~Y~APE~~~~~--~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  234 (263)
T d2j4za1         157 PSSRRTTLCGTLDYLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL  234 (263)
T ss_dssp             CCCCCEETTEEGGGCCHHHHTTC--CCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHH
T ss_pred             CCCcccccCCCCcccCHHHHcCC--CCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHH
Confidence                  1123322   2221110  11100                00000000         00113456789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCccccc
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      |.+||+.||++|||+.|+|+||||+.
T Consensus       235 i~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         235 ISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            99999999999999999999999974

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=263.25  Aligned_cols=194  Identities=22%  Similarity=0.294  Sum_probs=145.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +.|++++.||+|+||+||+|+++.+++.||||++.+.    .+.+.+|+.+|+.++|||||++++++     .+...+||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF-----YYENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----eeCCeEEE
Confidence            4599999999999999999999999999999999642    35678999999999999999999999     45566999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------cC-h
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------VD-Q  206 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------~~-~  206 (335)
                      |||||+| +|.+++...   .+.+++.+++.|+.||+.||.|||++|                             .. .
T Consensus        87 vmEy~~~g~L~~~~~~~---~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~  163 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT  163 (288)
T ss_dssp             EEECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred             EEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence            9999996 999987652   457999999999999999999999998                             00 0


Q ss_pred             HHhHhhhcCCCCHHHhhhh------CCCCCC------------------CCCCCCCC----------CccccccccCCCh
Q 019844          207 LVEIIKVLGTPTREEIKCM------NPNYTE------------------FKFPQIKP----------HPWHKVFQKRLPP  252 (335)
Q Consensus       207 ~~~~~~~~g~~~~~~~~~~------~~~~~~------------------~~~~~~~~----------~~~~~~~~~~~s~  252 (335)
                      .......+||+.+......      ...|..                  ..+.....          .+.....+..+|+
T Consensus       164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~  243 (288)
T d2jfla1         164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSS  243 (288)
T ss_dssp             HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCH
T ss_pred             cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCH
Confidence            0111233455542222111      111110                  01110000          0001122457899


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      ++++||.+||+.||++|||+.|+|+||||+.
T Consensus       244 ~~~~li~~~L~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         244 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            9999999999999999999999999999974

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-37  Score=269.85  Aligned_cols=194  Identities=22%  Similarity=0.303  Sum_probs=141.8

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|++++.||+|+||+||+|+++.+++.||||++.+.     ...+.+|+.+|+.++|||||+++++|     .+..+
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-----~~~~~   81 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY-----ESGGH   81 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEE-----ECSSE
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCE
Confidence            346699999999999999999999999999999999643     24567899999999999999999999     56667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      +|||||||+| +|.+++..    .+.+++.+++.|+.||+.||+|||+++                              
T Consensus        82 ~~lvmE~~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a  157 (307)
T d1a06a_          82 LYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS  157 (307)
T ss_dssp             EEEEECCCCSCBHHHHHHT----CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC---
T ss_pred             EEEEEeccCCCcHHHhhhc----ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEecccee
Confidence            9999999995 99999976    678999999999999999999999998                              


Q ss_pred             --cChHHhHhhhcCCCCH---HHhhhhCCCCCC------------------CCCCCC-----------CCCccccccccC
Q 019844          204 --VDQLVEIIKVLGTPTR---EEIKCMNPNYTE------------------FKFPQI-----------KPHPWHKVFQKR  249 (335)
Q Consensus       204 --~~~~~~~~~~~g~~~~---~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~~~~~~~  249 (335)
                        .+........+||+.+   |.+...  .|..                  ..+...           ....+....+..
T Consensus       158 ~~~~~~~~~~~~~GT~~y~APE~~~~~--~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  235 (307)
T d1a06a_         158 KMEDPGSVLSTACGTPGYVAPEVLAQK--PYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDD  235 (307)
T ss_dssp             ---------------CTTSCHHHHTTC--CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTT
T ss_pred             EEccCCCeeeeeeeCccccCcHHHcCC--CCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccC
Confidence              0000011122344442   221110  1110                  001000           001111223357


Q ss_pred             CChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          250 LPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +|+++.+||.+||+.||++|||+.|+|+||||++.
T Consensus       236 ~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         236 ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            89999999999999999999999999999999863

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-37  Score=266.86  Aligned_cols=196  Identities=20%  Similarity=0.269  Sum_probs=145.1

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhCCCCceeeeceeeeeCCC
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD  149 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~  149 (335)
                      ..++|++++.||+|+||+||+|+++.+|+.||||++.+.          .+.+.+|+.+|+.++|||||+++++|     
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~-----   82 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-----   82 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----
Confidence            446799999999999999999999999999999999642          24577999999999999999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH-----HhHh
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL-----VEII  211 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~-----~~~~  211 (335)
                      .+..++|||||||+| +|.+++..    .+.+++..++.|+.||+.||+|||+++            ++..     ...+
T Consensus        83 ~~~~~~~iv~E~~~gg~L~~~i~~----~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl  158 (293)
T d1jksa_          83 ENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  158 (293)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEE
T ss_pred             EECCEEEEEEEcCCCccccchhcc----ccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEe
Confidence            566679999999995 99999986    567999999999999999999999998            0000     0011


Q ss_pred             hh----------------cCCCC---HHHhhhhCCCCCC------------------CCCCCC-----------CCCccc
Q 019844          212 KV----------------LGTPT---REEIKCMNPNYTE------------------FKFPQI-----------KPHPWH  243 (335)
Q Consensus       212 ~~----------------~g~~~---~~~~~~~~~~~~~------------------~~~~~~-----------~~~~~~  243 (335)
                      ..                .|++.   ++.+...  .|..                  ..+...           ....+.
T Consensus       159 ~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~--~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~  236 (293)
T d1jksa_         159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE--PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFE  236 (293)
T ss_dssp             CCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC
T ss_pred             cchhhhhhcCCCccccccCCCCcccCHHHHcCC--CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence            11                22222   1211110  0100                  001000           001122


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ...+..+|+++++||++||+.||++|||++|+|+||||+....
T Consensus       237 ~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~  279 (293)
T d1jksa_         237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT  279 (293)
T ss_dssp             HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC---
T ss_pred             chhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCh
Confidence            2334678999999999999999999999999999999987543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-37  Score=264.36  Aligned_cols=194  Identities=21%  Similarity=0.229  Sum_probs=143.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||++...     .+.+.+|+.+|+.++|||||++++++     .+...+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~-----~~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR-----REGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEE-----EETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeee-----ccCcee
Confidence            45799999999999999999999999999999998642     24578999999999999999999999     555669


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-h---------------
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-Q---------------  206 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~---------------  206 (335)
                      |||||||+| +|.+++..    .+.+++.+++.|+.||+.||+|||++|            ++ .               
T Consensus        79 ~ivmEy~~gg~L~~~l~~----~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             EEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             EEEEeccCCCcHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence            999999996 99988864    567999999999999999999999998            00 0               


Q ss_pred             ----HHhHhhhcCCCCHHHhhhh-CCCCC-------------------CCCCCCCCCC----------ccccccccCCCh
Q 019844          207 ----LVEIIKVLGTPTREEIKCM-NPNYT-------------------EFKFPQIKPH----------PWHKVFQKRLPP  252 (335)
Q Consensus       207 ----~~~~~~~~g~~~~~~~~~~-~~~~~-------------------~~~~~~~~~~----------~~~~~~~~~~s~  252 (335)
                          .......+||+.+...+.. ...|.                   .+.+......          ......+..+|+
T Consensus       155 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  234 (271)
T d1nvra_         155 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS  234 (271)
T ss_dssp             ETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCH
T ss_pred             cCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCH
Confidence                0001122455432111100 00000                   0001000000          001112256899


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      ++.+||.+||+.||++|||++|+|+||||++
T Consensus       235 ~~~~li~~~L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         235 APLALLHKILVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCHhhCc
Confidence            9999999999999999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-36  Score=262.70  Aligned_cols=115  Identities=31%  Similarity=0.563  Sum_probs=101.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++..      ...+.+|+.+|+.++|||||+++++|     .+..++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~-----~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccc-----ccccce
Confidence            4699999999999999999999999999999999532      34577999999999999999999999     555669


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |+|||||.|++.+++....  ...+++..++.|+.||+.||+|||++|
T Consensus        77 ~iv~e~~~~~~~~~~~~~~--~~~l~e~~~~~~~~qil~~L~yLH~~~  122 (298)
T d1gz8a_          77 YLVFEFLHQDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHR  122 (298)
T ss_dssp             EEEEECCSEEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEeecCCchhhhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence            9999999987766665432  567999999999999999999999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=264.42  Aligned_cols=110  Identities=28%  Similarity=0.501  Sum_probs=93.1

Q ss_pred             EeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           86 AEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        86 ~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .+++||+|+||+||+|+++.+|+.||||+++..         .+.+.+|+.+|+.++|||||+++++|     ....++|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~-----~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF-----GHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE-----CCTTCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeee-----ccCCcee
Confidence            478999999999999999999999999998632         13577999999999999999999999     5566699


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||||.|++...+..   ....+++..++.|++||+.||+|||++|
T Consensus        77 ivmE~~~~~~~~~~~~---~~~~l~~~~~~~~~~qil~aL~~lH~~~  120 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQHW  120 (299)
T ss_dssp             EEEECCSEEHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             ehhhhhcchHHhhhhh---cccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999744333322   2567999999999999999999999998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-37  Score=262.88  Aligned_cols=197  Identities=20%  Similarity=0.284  Sum_probs=142.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||++...      .+.+.+|+.+|++++|||||++++++..   .....
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~---~~~~~   79 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT   79 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC-------C
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEe---CCCCE
Confidence            35799999999999999999999999999999998643      2346799999999999999999999853   23345


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------------  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------------  203 (335)
                      +|||||||+| +|.+++....+..+.+++..++.|+.||+.||+|||+++                              
T Consensus        80 ~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG  159 (269)
T d2java1          80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG  159 (269)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHH
T ss_pred             EEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecc
Confidence            8999999995 999999877666788999999999999999999999753                              


Q ss_pred             ----cC-hHHhHhhhcCCCCHHHhhhh-CCCCCC------------------CCCCCC---------CCCccccccccCC
Q 019844          204 ----VD-QLVEIIKVLGTPTREEIKCM-NPNYTE------------------FKFPQI---------KPHPWHKVFQKRL  250 (335)
Q Consensus       204 ----~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~------------------~~~~~~---------~~~~~~~~~~~~~  250 (335)
                          .. ........+||+.+...+.. ...|..                  ..+...         ....+ ..++..+
T Consensus       160 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~  238 (269)
T d2java1         160 LARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-RRIPYRY  238 (269)
T ss_dssp             HHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-CCCCTTS
T ss_pred             ceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC-CCCCccc
Confidence                00 00111123455542211111 011110                  001000         00011 1244678


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCccc
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFF  281 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f  281 (335)
                      |+++.+||.+||+.||++|||+.|+|+|||+
T Consensus       239 s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         239 SDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            9999999999999999999999999999995

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-37  Score=265.94  Aligned_cols=198  Identities=24%  Similarity=0.314  Sum_probs=147.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.       ...+.+|+.+|++++|||||+++++|     .+..
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~~   81 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDDE   81 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEE-----ECSS
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEE-----EECC
Confidence            35799999999999999999999999999999999642       24578999999999999999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------------  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------------  203 (335)
                      ++|||||||+| +|.+++..    .+.+++..++.++.||+.||+|||+++                             
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~  157 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV  157 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEccCCCCHHHhhhc----cCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEeccccccee
Confidence            79999999996 99998886    678999999999999999999999998                             


Q ss_pred             cC---hHHhHhhhcCCCCHHHhhhh-CCCCCC------------------CCCCCCCC-------CccccccccCCChHH
Q 019844          204 VD---QLVEIIKVLGTPTREEIKCM-NPNYTE------------------FKFPQIKP-------HPWHKVFQKRLPPEA  254 (335)
Q Consensus       204 ~~---~~~~~~~~~g~~~~~~~~~~-~~~~~~------------------~~~~~~~~-------~~~~~~~~~~~s~~~  254 (335)
                      ..   ........+||+.+...+.. ...|..                  ..+.....       ......+|..+++++
T Consensus       158 ~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  237 (288)
T d1uu3a_         158 LSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKA  237 (288)
T ss_dssp             CC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTCCHHH
T ss_pred             cccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCccCCHHH
Confidence            00   01111223455542211110 011110                  01110000       001123557899999


Q ss_pred             HHHHHHhccCCCCCCCCHHH------HhcCcccccCCCC
Q 019844          255 VDLVCRFFQYSPNLRCTALE------ACVHPFFDELRDP  287 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~------~L~hp~f~~~~~~  287 (335)
                      ++||++||+.||++|||++|      +++||||+.+.+.
T Consensus       238 ~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w~  276 (288)
T d1uu3a_         238 RDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE  276 (288)
T ss_dssp             HHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCT
T ss_pred             HHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCHH
Confidence            99999999999999999987      5889999988654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=268.05  Aligned_cols=235  Identities=22%  Similarity=0.356  Sum_probs=154.5

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|++++.||+|+||+||+|+++.+|+.||||++.+.      .+.+.+|+.+|+.++|||||+++++|..... ...
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            456899999999999999999999999999999999643      2456799999999999999999999965432 234


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HH----------
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LV----------  208 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~----------  208 (335)
                      .++|+|||||+++|..+++     .+++++..++.|+.||+.||+|||++|            ++.  ..          
T Consensus        96 ~~~~lv~e~~~~~l~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          96 TDFYLVMPFMGTDLGKLMK-----HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             CCCEEEEECCSEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             ceEEEEEecccccHHHHHH-----hccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceec
Confidence            4578999999778888776     357999999999999999999999998            000  00          


Q ss_pred             ---hHhhhcCCCC---HHHhh----------------------hhCCCCCCC----------------------------
Q 019844          209 ---EIIKVLGTPT---REEIK----------------------CMNPNYTEF----------------------------  232 (335)
Q Consensus       209 ---~~~~~~g~~~---~~~~~----------------------~~~~~~~~~----------------------------  232 (335)
                         ......|++.   ++.+.                      .+.+.|...                            
T Consensus       171 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (346)
T d1cm8a_         171 ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE  250 (346)
T ss_dssp             CCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred             cCCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchh
Confidence               0001112221   11111                      111111100                            


Q ss_pred             ------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          233 ------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       233 ------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                            ..+......+...+ ..+++++.+||++||+.||++|||+.|+|+||||+.+..+..+... .    .++.. .
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~-~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~~~~~-~----~~~~~-~  323 (346)
T d1cm8a_         251 AKNYMKGLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV-Q----KYDDS-F  323 (346)
T ss_dssp             HHHHHHHSCCCCCCCGGGTC-TTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CC-C----CCCCC--
T ss_pred             hhhhhccCCcccccchHHhc-cCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccccccC-C----CCCCc-h
Confidence                  01111222233223 5689999999999999999999999999999999998766543221 1    12222 2


Q ss_pred             cCCCCCHHHHhhcChHHHhh
Q 019844          307 ELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +.-+.+.+++++++.+|+..
T Consensus       324 ~~~~~~~~e~k~~~~~e~~~  343 (346)
T d1cm8a_         324 DDVDRTLDEWKRVTYKEVLS  343 (346)
T ss_dssp             ----CCHHHHHHHHHHHHHT
T ss_pred             hhhhcCHHHHHHHHHHHhhc
Confidence            23345778999998888764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-37  Score=267.27  Aligned_cols=190  Identities=21%  Similarity=0.238  Sum_probs=142.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .+|++++.||+|+||+||+|+++.+|+.||||++...    .+.+.+|+.+|+.++|||||+++++|     ....++||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~i   94 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY-----LVGDELWV   94 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEE-----EECCEEEE
Confidence            3599999999999999999999999999999998642    24578999999999999999999999     45556999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh------------------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ------------------  206 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~------------------  206 (335)
                      |||||+| +|.+++..     +.+++.+++.|+.||+.||+|||++|            ++.                  
T Consensus        95 vmEy~~gg~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1          95 VMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (293)
T ss_dssp             EEECCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEecCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence            9999996 99988763     56999999999999999999999999            000                  


Q ss_pred             HHhHhhhcCCCC---HHHhhhhCCCCCC------------------CCCCCCC----------CCccccccccCCChHHH
Q 019844          207 LVEIIKVLGTPT---REEIKCMNPNYTE------------------FKFPQIK----------PHPWHKVFQKRLPPEAV  255 (335)
Q Consensus       207 ~~~~~~~~g~~~---~~~~~~~~~~~~~------------------~~~~~~~----------~~~~~~~~~~~~s~~~~  255 (335)
                      .......+||+.   ||.+...  .|..                  ..|....          ........+..+|++++
T Consensus       170 ~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  247 (293)
T d1yhwa1         170 QSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR  247 (293)
T ss_dssp             TCCBCCCCSCGGGCCHHHHSSS--CBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHH
T ss_pred             cccccccccCCCccChhhhcCC--CCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHH
Confidence            000112234433   2221110  1110                  0010000          00011223467899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCccccc
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDE  283 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~  283 (335)
                      +||.+||+.||++|||+.|+|+||||+.
T Consensus       248 ~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         248 DFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            9999999999999999999999999975

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-36  Score=265.72  Aligned_cols=235  Identities=23%  Similarity=0.388  Sum_probs=160.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ..+|++++.||+|+||+||+|+++.+|+.||||+|.+..     +.+.+|+.+|+.++|||||++++++.........++
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            456999999999999999999999999999999996432     356789999999999999999999966544455567


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH-H--------------
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL-V--------------  208 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~-~--------------  208 (335)
                      |++|++++|+|.+++..     +++++..++.++.||+.||+|||++|            ++.. .              
T Consensus        87 ~l~~~~~~g~L~~~l~~-----~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEEEECCCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEeecCCchhhhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            78888777899999974     46999999999999999999999999            0000 0              


Q ss_pred             ------hHhhhcCCCCHHHhhh-------------------------hCCCCCCC-------------------------
Q 019844          209 ------EIIKVLGTPTREEIKC-------------------------MNPNYTEF-------------------------  232 (335)
Q Consensus       209 ------~~~~~~g~~~~~~~~~-------------------------~~~~~~~~-------------------------  232 (335)
                            .....+|++.+.....                         +.+.|..-                         
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII  241 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCC
T ss_pred             CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhh
Confidence                  0001122222111100                         01111000                         


Q ss_pred             ---------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCC
Q 019844          233 ---------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNF  303 (335)
Q Consensus       233 ---------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~  303 (335)
                               ..+.....+|...+ +.+++++++||.+||+.||.+|||+.|+|+||||++...+......    ...+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~~~~~----~~~~~~  316 (345)
T d1pmea_         242 NLKARNYLLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIA----EAPFKF  316 (345)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHC-TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGGSCCC----SSCC--
T ss_pred             hhhhhcccccCCccCCCCHHHhC-CCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCCccCccc----cCccCC
Confidence                     01111111222222 5678999999999999999999999999999999988776543221    234556


Q ss_pred             CcccCCCCCHHHHhhcChHHHhh
Q 019844          304 KPPELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~  326 (335)
                      + .+..+++.+.+++++.+|..+
T Consensus       317 ~-~~~~~~~~~~l~~l~~~e~~~  338 (345)
T d1pmea_         317 D-MELDDLPKEKLKELIFEETAR  338 (345)
T ss_dssp             -------CCHHHHHHHHHHHSGG
T ss_pred             C-hhhhhCCHHHHHHHHHHHHHh
Confidence            5 678888999999988887655

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=258.13  Aligned_cols=194  Identities=22%  Similarity=0.333  Sum_probs=142.6

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      |++.++||+|+||+||+|+++.+++.||+|++...      .+.+.+|+++|++++|||||+++++|.... ....++||
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecc-ccCCEEEE
Confidence            47788999999999999999999999999998642      245779999999999999999999986433 34567899


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cCh--------------HHh----------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---VDQ--------------LVE----------  209 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---~~~--------------~~~----------  209 (335)
                      |||||+| +|.+++..    ...+++..++.|+.||+.||+|||+++   ++.              ..+          
T Consensus        90 vmE~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~  165 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  165 (270)
T ss_dssp             EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEeCCCCCcHHHHHhc----cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceec
Confidence            9999996 99999986    567999999999999999999999986   000              000          


Q ss_pred             ----HhhhcCCCCHHHhhhhCCCCCC------------------CCCCCC----------CCCccccccccCCChHHHHH
Q 019844          210 ----IIKVLGTPTREEIKCMNPNYTE------------------FKFPQI----------KPHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       210 ----~~~~~g~~~~~~~~~~~~~~~~------------------~~~~~~----------~~~~~~~~~~~~~s~~~~~l  257 (335)
                          ....+||+.+...+.....|..                  ..+...          ........++..+++++++|
T Consensus       166 ~~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  245 (270)
T d1t4ha_         166 RASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI  245 (270)
T ss_dssp             CTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred             cCCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHH
Confidence                0112344442211111111110                  011100          01111223445689999999


Q ss_pred             HHHhccCCCCCCCCHHHHhcCcccc
Q 019844          258 VCRFFQYSPNLRCTALEACVHPFFD  282 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~hp~f~  282 (335)
                      |.+||+.||++|||++|+|+||||+
T Consensus       246 i~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         246 IEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHccCCHhHCcCHHHHhCCcccC
Confidence            9999999999999999999999996

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=265.64  Aligned_cols=235  Identities=24%  Similarity=0.321  Sum_probs=163.6

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc------hhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK------RYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~  152 (335)
                      ..++|+++++||+|+||+||+|+++.+|+.||||++.+..      +.+.+|+.+|+.++|||||+++++|..... .+.
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            3567999999999999999999999999999999996432      356799999999999999999999865432 233


Q ss_pred             cEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ChHHh------------Hhhhc-----
Q 019844          153 LYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV-DQLVE------------IIKVL-----  214 (335)
Q Consensus       153 ~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~-~~~~~------------~~~~~-----  214 (335)
                      .++++++++++|+|.+++.     .+++++..++.|+.||+.||+|||++|+ +...+            .+..+     
T Consensus        96 ~~~~i~~~~~gg~L~~~~~-----~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~  170 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVK-----CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARH  170 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----C
T ss_pred             ceEEEEEeecCCchhhhcc-----cccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcc
Confidence            4455655555569999885     4579999999999999999999999980 00000            00000     


Q ss_pred             ---------CCC---CHHH-------------hh---------hhCCCCCCC----------------------------
Q 019844          215 ---------GTP---TREE-------------IK---------CMNPNYTEF----------------------------  232 (335)
Q Consensus       215 ---------g~~---~~~~-------------~~---------~~~~~~~~~----------------------------  232 (335)
                               |++   .++.             |.         .+.+.|...                            
T Consensus       171 ~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (348)
T d2gfsa1         171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  250 (348)
T ss_dssp             CTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHH
T ss_pred             cCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchh
Confidence                     000   0010             00         111111100                            


Q ss_pred             ------CCCCCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCCCCCCCCCcc
Q 019844          233 ------KFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPP  306 (335)
Q Consensus       233 ------~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~  306 (335)
                            .........+...+ ..++++++|||++||+.||++|||+.|+|+||||+++..|..+.     +...+++. .
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~-~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~~-----~~~~~~~~-~  323 (348)
T d2gfsa1         251 ARNYIQSLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEP-----VADPYDQS-F  323 (348)
T ss_dssp             HHHHHTTSCCCCCCCHHHHS-TTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSCC-----CCCCCCCG-G
T ss_pred             hhhhhhhcccCCCcchhhhc-CCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccCC-----CCCCCCCc-c
Confidence                  01111111222222 46899999999999999999999999999999999987765543     23334444 5


Q ss_pred             cCCCCCHHHHhhcChHHHhh
Q 019844          307 ELSGIPPETINRLIPEHARK  326 (335)
Q Consensus       307 ~~~~~~~~~~~~~~~~~~~~  326 (335)
                      +..++..+.+++++.+|+.+
T Consensus       324 ~~~~~~~~~~k~~~~~e~~~  343 (348)
T d2gfsa1         324 ESRDLLIDEWKSLTYDEVIS  343 (348)
T ss_dssp             GGCCCCHHHHHHHHHHHHHT
T ss_pred             cchhcCHHHHHHHHHHHhhc
Confidence            56788889999988887653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-36  Score=265.79  Aligned_cols=196  Identities=23%  Similarity=0.336  Sum_probs=146.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+.       ...+.+|+.+|+.++|||||+++++|     .+..+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSSE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeee-----ccccc
Confidence            4699999999999999999999999999999999642       24577999999999999999999999     66677


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh---------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ---------------  206 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~---------------  206 (335)
                      +|+|||||+| +|.+++..    .+.++|..++.|+.||+.||+|||++|            ++.               
T Consensus        80 ~~iv~ey~~gg~L~~~~~~----~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~  155 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             cccceeccCCCchhhhhhc----ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccc
Confidence            9999999996 99999887    678999999999999999999999998            000               


Q ss_pred             ---HHhHhhhcCCCCHHHhhhh-CCCCCCC----------------CCCCCCCCc---------cccccccCCChHHHHH
Q 019844          207 ---LVEIIKVLGTPTREEIKCM-NPNYTEF----------------KFPQIKPHP---------WHKVFQKRLPPEAVDL  257 (335)
Q Consensus       207 ---~~~~~~~~g~~~~~~~~~~-~~~~~~~----------------~~~~~~~~~---------~~~~~~~~~s~~~~~l  257 (335)
                         .......+||+.+...... ...|...                ..+......         -...+|..+|+++++|
T Consensus       156 ~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dl  235 (337)
T d1o6la_         156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL  235 (337)
T ss_dssp             CCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred             ccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHH
Confidence               0001122344332111110 0011100                000000000         0123567899999999


Q ss_pred             HHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          258 VCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       258 i~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      |++||++||.+|++     +.|+++||||+++.+
T Consensus       236 i~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~  269 (337)
T d1o6la_         236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             HHhhccCCchhhcccccccHHHHHcCcccccCCH
Confidence            99999999999994     999999999988653

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=9.2e-36  Score=257.24  Aligned_cols=194  Identities=23%  Similarity=0.349  Sum_probs=144.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------------hhHHHHHHHHHhCC-CCceeeeceeeeeC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------------RYKNRELQIMQMLD-HPNIVALKHCFFST  147 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------------~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~  147 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+..             ..+.+|+.+|+.++ |||||+++++|   
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~---   79 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY---   79 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE---
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec---
Confidence            56999999999999999999999999999999996431             24678999999996 99999999999   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI-----------------------  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~-----------------------  203 (335)
                        .+..++|||||||+| +|.+++..    .+.+++.+++.|+.||+.||+|||++|                       
T Consensus        80 --~~~~~~~ivmE~~~~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~D  153 (277)
T d1phka_          80 --ETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD  153 (277)
T ss_dssp             --ECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             --ccCcceEEEEEcCCCchHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEcc
Confidence              566679999999996 99999986    567999999999999999999999998                       


Q ss_pred             ------cChHHhHhhhcCCCC---HHHhhhh----CCCCCC------------------CCCCCC-----------CCCc
Q 019844          204 ------VDQLVEIIKVLGTPT---REEIKCM----NPNYTE------------------FKFPQI-----------KPHP  241 (335)
Q Consensus       204 ------~~~~~~~~~~~g~~~---~~~~~~~----~~~~~~------------------~~~~~~-----------~~~~  241 (335)
                            ..........+||+.   ++.+...    .+.|..                  ..+...           ....
T Consensus       154 FG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~  233 (277)
T d1phka_         154 FGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ  233 (277)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             chheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCC
Confidence                  000000111223322   2222110    011110                  001000           0001


Q ss_pred             cccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          242 WHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +.......+|+++++||.+||+.||++|||++|+|+||||+++
T Consensus       234 ~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         234 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            1122235789999999999999999999999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-36  Score=266.13  Aligned_cols=196  Identities=20%  Similarity=0.266  Sum_probs=143.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++++.||+|+||+||+|.++.+++.||||++++..   ..+.+|+.+|+.++|||||+++++|     .+..++||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~~~~l   78 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF-----ESMEELVM   78 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEE-----EETTEEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEEEE
Confidence            356999999999999999999999999999999997543   3467999999999999999999999     55667999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC---hHHhHhhhc-------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD---QLVEIIKVL-------  214 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~---~~~~~~~~~-------  214 (335)
                      |||||+| +|.+++...   ...+++.+++.|+.||+.||+|||++|            ++   .....+..+       
T Consensus        79 vmE~~~gg~L~~~i~~~---~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~  155 (321)
T d1tkia_          79 IFEFISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EECCCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             EEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccc
Confidence            9999996 999988641   346999999999999999999999998            00   000001111       


Q ss_pred             ---------CCCC---HHHh------------h---------hhCCCCCCCCC----CCC--CCCccccccccCCChHHH
Q 019844          215 ---------GTPT---REEI------------K---------CMNPNYTEFKF----PQI--KPHPWHKVFQKRLPPEAV  255 (335)
Q Consensus       215 ---------g~~~---~~~~------------~---------~~~~~~~~~~~----~~~--~~~~~~~~~~~~~s~~~~  255 (335)
                               |++.   ++..            .         .+.+.|.....    ..+  ....+....+..+|++++
T Consensus       156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  235 (321)
T d1tkia_         156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM  235 (321)
T ss_dssp             TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred             cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence                     2221   1100            0         01111110000    000  001112223357899999


Q ss_pred             HHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          256 DLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       256 ~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      +||.+||+.||++|||+.|+|+||||++.
T Consensus       236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         236 DFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999999999999763

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=267.17  Aligned_cols=194  Identities=24%  Similarity=0.369  Sum_probs=142.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHH-hCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQ-MLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~-~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.++       ...+.+|+.++. .++|||||+++++|     .+..
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~-----~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF-----QTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----ECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEE-----ccCC
Confidence            4699999999999999999999999999999999642       134566777665 68999999999999     5666


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc------------Ch--------------
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV------------DQ--------------  206 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~------------~~--------------  206 (335)
                      ++|||||||+| +|.+++..    ...+++.+++.|+.||+.||+|||++++            +.              
T Consensus        77 ~~yivmEy~~~g~L~~~i~~----~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~  152 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE  152 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             ceeEEEeecCCCcHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhh
Confidence            79999999996 99999986    6679999999999999999999999980            00              


Q ss_pred             ----HHhHhhhcCCCC---HHHhhhhCCCCCC----------------CCCCCCCCC---------ccccccccCCChHH
Q 019844          207 ----LVEIIKVLGTPT---REEIKCMNPNYTE----------------FKFPQIKPH---------PWHKVFQKRLPPEA  254 (335)
Q Consensus       207 ----~~~~~~~~g~~~---~~~~~~~~~~~~~----------------~~~~~~~~~---------~~~~~~~~~~s~~~  254 (335)
                          .......+||+.   ++.+...  .|..                ...|.....         .-...+|..+|+++
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~  230 (320)
T d1xjda_         153 NMLGDAKTNTFCGTPDYIAPEILLGQ--KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEA  230 (320)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             cccccccccccCCCCCcCCHHHHcCC--CCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHH
Confidence                000011233333   1211110  1110                000000000         00123456789999


Q ss_pred             HHHHHHhccCCCCCCCCHH-HHhcCcccccCCC
Q 019844          255 VDLVCRFFQYSPNLRCTAL-EACVHPFFDELRD  286 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~-~~L~hp~f~~~~~  286 (335)
                      ++||++||+.||++|||+. ++++||||+++.+
T Consensus       231 ~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~  263 (320)
T d1xjda_         231 KDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  263 (320)
T ss_dssp             HHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             HHHHHHhcccCCCCCcCHHHHHHhCchhccCCH
Confidence            9999999999999999995 8999999988643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-35  Score=254.48  Aligned_cols=113  Identities=31%  Similarity=0.473  Sum_probs=100.9

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|++++.||+|+||+||+|+++.+++.||||+++..      ...+.+|+.+|+.++|||||+++++|     ....++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~-----~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccc-----ccccce
Confidence            4799999999999999999999999999999998643      24567999999999999999999999     556668


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++||+++.| +|..++..    .+.+++..++.++.|++.||+|||+++
T Consensus        77 ~iv~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~q~~~aL~~lH~~~  121 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRN  121 (292)
T ss_dssp             EEEEECCSEEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEeeecccccccccccc----ccccchhHHHHHHHHHHHHHHHhhcCC
Confidence            999999997 77766654    678999999999999999999999998

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.4e-35  Score=264.32  Aligned_cols=200  Identities=23%  Similarity=0.320  Sum_probs=146.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.    .+.+.+|+.+|+.++|||||+++++|     .+..++|
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~   99 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEMV   99 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----EETTEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEE
Confidence            35799999999999999999999999999999999643    24577999999999999999999999     5566799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c--Ch-HHhHhh--------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V--DQ-LVEIIK--------  212 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~--~~-~~~~~~--------  212 (335)
                      ||||||+| +|.+++..   ..+.+++..++.|+.||+.||+|||++|            +  +. ....+.        
T Consensus       100 ivmE~~~gg~L~~~l~~---~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2         100 MIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             EEECCCCSCBHHHHHTC---TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEEC
T ss_pred             EEEEcCCCCCHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheec
Confidence            99999996 99988853   1457999999999999999999999999            1  00 000011        


Q ss_pred             --------hcCCCC---HHHhhh---------------------hCCCCCCCCC----CCCC--CCccccccccCCChHH
Q 019844          213 --------VLGTPT---REEIKC---------------------MNPNYTEFKF----PQIK--PHPWHKVFQKRLPPEA  254 (335)
Q Consensus       213 --------~~g~~~---~~~~~~---------------------~~~~~~~~~~----~~~~--~~~~~~~~~~~~s~~~  254 (335)
                              ..||+.   +|.+..                     +.+.|.....    ..+.  ...+.......+|+++
T Consensus       177 ~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  256 (350)
T d1koaa2         177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  256 (350)
T ss_dssp             CTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHH
T ss_pred             ccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence                    123332   222111                     0011100000    0000  0011122235689999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccCCCCC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDELRDPN  288 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~  288 (335)
                      ++||.+||+.||++|||+.|+|+||||+....+.
T Consensus       257 ~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~~  290 (350)
T d1koaa2         257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG  290 (350)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCCS
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcccCCCCCCC
Confidence            9999999999999999999999999999876553

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-35  Score=263.62  Aligned_cols=233  Identities=21%  Similarity=0.286  Sum_probs=154.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC-CCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD-KEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~-~~~~~  154 (335)
                      ++|+++++||+|+||+||+|+++.+|+.||||++.+.      ...+.+|+.+|+.++|||||+++++|..... ....+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5799999999999999999999999999999999643      2357799999999999999999999964332 34578


Q ss_pred             EEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCCc--------------C---------------
Q 019844          155 LNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCIV--------------D---------------  205 (335)
Q Consensus       155 ~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~~--------------~---------------  205 (335)
                      +|+|||||.|++.+.+      ...+++..++.++.||+.||+|||++|+              +               
T Consensus        97 ~~iv~Ey~~~~l~~~~------~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          97 VYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             EEEEEECCSEEHHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             eEEEEeccchHHHHhh------hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccc
Confidence            9999999998766554      3569999999999999999999999990              0               


Q ss_pred             hHHhHhhhcCCCC---HHHhh---------------------hhCCCCCCC-----------------------------
Q 019844          206 QLVEIIKVLGTPT---REEIK---------------------CMNPNYTEF-----------------------------  232 (335)
Q Consensus       206 ~~~~~~~~~g~~~---~~~~~---------------------~~~~~~~~~-----------------------------  232 (335)
                      ........+||+.   ++.+.                     .+.+.|...                             
T Consensus       171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence            0000011123322   12111                     111111000                             


Q ss_pred             ----CCCCCCCCcccccc-----------ccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCCCCCCCCCCCCCC
Q 019844          233 ----KFPQIKPHPWHKVF-----------QKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPL  297 (335)
Q Consensus       233 ----~~~~~~~~~~~~~~-----------~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~~~~~~~~~~~~~  297 (335)
                          ..+......+...+           +...++++.+||++||++||++||||+|+|+||||+...++.....   +-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~~~~~~---~~  327 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA---PP  327 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHHHHTC---CC
T ss_pred             HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCCcccccC---CC
Confidence                00000000011111           1234678999999999999999999999999999998765443221   11


Q ss_pred             CCCCCCCcccCCCCCHHHHhhcChHHH
Q 019844          298 PPLFNFKPPELSGIPPETINRLIPEHA  324 (335)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (335)
                      |.+++.+ .+....+.+.|+++|..|+
T Consensus       328 ~~~~~~~-~~~~~~~~~~~~~~~~~~~  353 (355)
T d2b1pa1         328 PQIYDKQ-LDEREHTIEEWKELIYKEV  353 (355)
T ss_dssp             C--------CCCCCCHHHHHHHHHHHH
T ss_pred             CCCCCcc-hhhhhcCHHHHHHHHHHHh
Confidence            2333433 4456778888988877665

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-36  Score=264.69  Aligned_cols=115  Identities=19%  Similarity=0.353  Sum_probs=102.9

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..++|++++.||+|+||+||+|+++.+|+.||+|+++..     ...+.+|+.+|+.++|||||+++++|     .+..+
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~-----~~~~~   78 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF-----YSDGE   78 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEE-----ECSSE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCE
Confidence            346799999999999999999999999999999999643     24577999999999999999999999     55566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC-C
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC-I  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-~  203 (335)
                      +|||||||+| +|.+++..    .+.+++..++.++.||+.||.|||++ +
T Consensus        79 ~~iVmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qil~aL~yLH~~~~  125 (322)
T d1s9ja_          79 ISICMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHK  125 (322)
T ss_dssp             EEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999996 99999986    56799999999999999999999974 6

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-35  Score=259.29  Aligned_cols=195  Identities=23%  Similarity=0.272  Sum_probs=142.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ..|++++.||+|+||+||+|+++.+|+.||||++.+..       +.+.+|+.+|+.++|||||+++++|     .+..+
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~~   89 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY-----LREHT   89 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----EETTE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEE-----EECCE
Confidence            45999999999999999999999999999999996432       3467899999999999999999999     45566


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hH-------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QL-------------  207 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~-------------  207 (335)
                      +|||||||.| +|..++..    ++.+++.+++.|+.||+.||.|||++|            ++ ..             
T Consensus        90 ~~iv~E~~~~g~l~~~~~~----~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~  165 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  165 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             EEEEEEecCCCchHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeeccccccc
Confidence            9999999996 67655554    678999999999999999999999998            00 00             


Q ss_pred             HhHhhhcCCCCHHHhhhh---C-CCCCC----------------CCCCCCCCC-----------ccccccccCCChHHHH
Q 019844          208 VEIIKVLGTPTREEIKCM---N-PNYTE----------------FKFPQIKPH-----------PWHKVFQKRLPPEAVD  256 (335)
Q Consensus       208 ~~~~~~~g~~~~~~~~~~---~-~~~~~----------------~~~~~~~~~-----------~~~~~~~~~~s~~~~~  256 (335)
                      ......+||+.+......   . ..|..                ...|.....           ......+..+|+++++
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~  245 (309)
T d1u5ra_         166 APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  245 (309)
T ss_dssp             SSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHH
T ss_pred             CCCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHH
Confidence            001122344432222111   0 11111                000000000           0111223468999999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ||.+||+.||.+|||++|+|+||||....
T Consensus       246 li~~~L~~dP~~Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         246 FVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             HHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence            99999999999999999999999998643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-34  Score=251.94  Aligned_cols=113  Identities=27%  Similarity=0.431  Sum_probs=97.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      ++|+++++||+|+||+||+|+++ +|+.||||++...      ...+.+|+.+|+.++|||||+++++|     .....+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI-----HTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE-----ECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeec-----ccCCce
Confidence            57999999999999999999995 8899999999643      24678999999999999999999999     445558


Q ss_pred             EEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |++|||+.|++...+..   ..+.+++..++.|+.||+.||+|||+++
T Consensus        76 ~i~~e~~~~~~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~  120 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDV---CEGGLESVTAKSFLLQLLNGIAYCHDRR  120 (286)
T ss_dssp             EEEEECCSEEHHHHHHT---STTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eEEEEeehhhhHHHHHh---hcCCcchhhhHHHHHHHHHHHHHhccCc
Confidence            99999999844444432   2577999999999999999999999998

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.2e-35  Score=262.13  Aligned_cols=197  Identities=22%  Similarity=0.295  Sum_probs=143.9

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.    ...+.+|+.+|+.|+|||||+++++|     .+..++|
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~~~~~  102 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMV  102 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EECCEEE
Confidence            35699999999999999999999999999999999653    24567899999999999999999999     5666799


Q ss_pred             EEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC---hHHhHhhhc------
Q 019844          157 LVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD---QLVEIIKVL------  214 (335)
Q Consensus       157 iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~---~~~~~~~~~------  214 (335)
                      ||||||+| +|.+++..   ...++++.+++.|+.||+.||+|||++|            ++   .....+..+      
T Consensus       103 ivmE~~~gg~L~~~~~~---~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~  179 (352)
T d1koba_         103 LILEFLSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  179 (352)
T ss_dssp             EEEECCCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEcCCCChHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceec
Confidence            99999996 99877653   2456999999999999999999999998            10   000011122      


Q ss_pred             ----------CCCC---HHHhh---------------------hhCCCCCCCCCC----CC--CCCccccccccCCChHH
Q 019844          215 ----------GTPT---REEIK---------------------CMNPNYTEFKFP----QI--KPHPWHKVFQKRLPPEA  254 (335)
Q Consensus       215 ----------g~~~---~~~~~---------------------~~~~~~~~~~~~----~~--~~~~~~~~~~~~~s~~~  254 (335)
                                |++.   ++.+.                     ++.+.|......    .+  ....+....+..+|+++
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  259 (352)
T d1koba_         180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA  259 (352)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred             CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence                      2221   11111                     011111100000    00  00111222335789999


Q ss_pred             HHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          255 VDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       255 ~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                      ++||.+||+.||.+|||+.|+|+||||+...
T Consensus       260 ~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~  290 (352)
T d1koba_         260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  290 (352)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHhhCCCc
Confidence            9999999999999999999999999998754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.4e-35  Score=256.21  Aligned_cols=194  Identities=23%  Similarity=0.388  Sum_probs=147.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+.       .+.+.+|+.+|+.++|||||++++++     .+..+
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeE-----eeCCe
Confidence            4599999999999999999999999999999999642       24577999999999999999999999     56667


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--H------------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--L------------  207 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~------------  207 (335)
                      +|+|||||.| +|..++..    ...+++..++.|+.||+.||+|||++|            ++.  .            
T Consensus        79 ~~ivmE~~~gg~l~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~  154 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV  154 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             eeeEeeecCCccccccccc----cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEe
Confidence            9999999996 88888876    678999999999999999999999999            000  0            


Q ss_pred             -HhHhhhcCCCC---HHHhhhhCCCCCCC----------------CCCCCCCCc---------cccccccCCChHHHHHH
Q 019844          208 -VEIIKVLGTPT---REEIKCMNPNYTEF----------------KFPQIKPHP---------WHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       208 -~~~~~~~g~~~---~~~~~~~~~~~~~~----------------~~~~~~~~~---------~~~~~~~~~s~~~~~li  258 (335)
                       ......+||+.   +|.+...  .|...                ..|......         -...++..+|++++++|
T Consensus       155 ~~~~~~~~Gt~~Y~APE~l~~~--~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li  232 (316)
T d1fota_         155 PDVTYTLCGTPDYIAPEVVSTK--PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLL  232 (316)
T ss_dssp             SSCBCCCCSCTTTCCHHHHTTC--CBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHH
T ss_pred             ccccccccCcccccCHHHHcCC--CCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence             00112345554   2222111  11110                011000000         01234567899999999


Q ss_pred             HHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .+||+.||.+|+     |++++|+||||+++.+
T Consensus       233 ~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~  265 (316)
T d1fota_         233 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  265 (316)
T ss_dssp             HHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             HHHhhhCHHhccccchhhHHHHHcCcccccCCH
Confidence            999999999996     8999999999998754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-34  Score=248.68  Aligned_cols=202  Identities=24%  Similarity=0.398  Sum_probs=143.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCC-CcEEEEEEeccc------chhHHHHHHHHHhC---CCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRET-GEIVAIKKVLQD------KRYKNRELQIMQML---DHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~-~~~vAvK~i~~~------~~~~~~Ei~~l~~l---~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|++++.||+|+||+||+|+++.+ ++.||||+++..      .....+|+.+|+.|   +|||||+++++|......
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            35799999999999999999999766 677999998632      23466898888776   799999999999765545


Q ss_pred             CccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---------------------------
Q 019844          151 EELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI---------------------------  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---------------------------  203 (335)
                      ...++|++||||+|++..+.....  ...+++..++.|+.||+.||+|||+++                           
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~  163 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  163 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             cCceEEEEEEeccCCchhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence            667899999999985544444322  567999999999999999999999998                           


Q ss_pred             --cChHHhHhhhcCCCCH---HHhhh---------------------hCCCCCCC-------------------CCC---
Q 019844          204 --VDQLVEIIKVLGTPTR---EEIKC---------------------MNPNYTEF-------------------KFP---  235 (335)
Q Consensus       204 --~~~~~~~~~~~g~~~~---~~~~~---------------------~~~~~~~~-------------------~~~---  235 (335)
                        ...........||+.+   |.+..                     +.+.|...                   .++   
T Consensus       164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  243 (305)
T d1blxa_         164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  243 (305)
T ss_dssp             CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred             hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccc
Confidence              0111111223445442   22111                     11111100                   000   


Q ss_pred             --------CCCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcCcccccCC
Q 019844          236 --------QIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELR  285 (335)
Q Consensus       236 --------~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~~  285 (335)
                              .....+ ...++..+++++++||.+||++||++|||+.|+|+||||+++.
T Consensus       244 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         244 ALPRQAFHSKSAQP-IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             SSCGGGSCCCCCCC-GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             cchhhhhccccccc-hhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCch
Confidence                    000001 1123357899999999999999999999999999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-34  Score=257.34  Aligned_cols=194  Identities=25%  Similarity=0.345  Sum_probs=145.0

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+.       .+.+.+|+.+|+.++|||||+++++|     .....
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccc-----ccccc
Confidence            4699999999999999999999999999999999642       24567999999999999999999999     56666


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HHh----------
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LVE----------  209 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~~----------  209 (335)
                      +|+||||+.| +|..++..    .+.+++..++.|+.||+.||.|||+++            ++.  ..+          
T Consensus       116 ~~~v~e~~~~g~l~~~l~~----~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~  191 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cccccccccccchhhhHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeec
Confidence            9999999996 99888876    567999999999999999999999998            000  000          


Q ss_pred             ---HhhhcCCCC---HHHhhhhCCCCCC----------------CCCCCCCCCc---------cccccccCCChHHHHHH
Q 019844          210 ---IIKVLGTPT---REEIKCMNPNYTE----------------FKFPQIKPHP---------WHKVFQKRLPPEAVDLV  258 (335)
Q Consensus       210 ---~~~~~g~~~---~~~~~~~~~~~~~----------------~~~~~~~~~~---------~~~~~~~~~s~~~~~li  258 (335)
                         .....||+.   ++.+...  .|..                ...|......         ....++..+++++.+||
T Consensus       192 ~~~~~~~~Gt~~Y~APE~~~~~--~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li  269 (350)
T d1rdqe_         192 KGRTWTLCGTPEALAPEIILSK--GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLL  269 (350)
T ss_dssp             SSCBCCCEECGGGCCHHHHTTC--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHH
T ss_pred             ccccccccCccccCCHHHHcCC--CCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHH
Confidence               011223333   2221110  0100                0000000000         01234567899999999


Q ss_pred             HHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          259 CRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       259 ~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      ++||+.||.+|+     |++++|+||||+...+
T Consensus       270 ~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~  302 (350)
T d1rdqe_         270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             HHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             HHHhhhCHHhccccccccHHHHHcCccccCCCH
Confidence            999999999995     8999999999988754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-34  Score=253.86  Aligned_cols=201  Identities=18%  Similarity=0.179  Sum_probs=141.5

Q ss_pred             ceeeeEEee-eeeccCceEEEEEEEcCCCcEEEEEEecccchhHHHHHHHHHh-CCCCceeeeceeeeeCCCCCccEEEE
Q 019844           80 QKVSYIAEH-VVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQM-LDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        80 ~~~~y~~~~-~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~Ei~~l~~-l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      ..++|.+.. .||+|+||+||+|+++.+++.||||++++ ...+.+|+.++.+ ++|||||+++++|.+.. ....++||
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~-~~~~~~~i   86 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-CPKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLLI   86 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-cHHHHHHHHHHHHhcCCCCCCeEEEEEeecc-cCCCEEEE
Confidence            345798875 69999999999999999999999999965 4567899998765 48999999999984322 23567999


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh----HHhHh---------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ----LVEII---------  211 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~----~~~~~---------  211 (335)
                      |||||+| +|.+++....  ...+++.+++.|+.||+.||+|||++|            ++.    ....+         
T Consensus        87 vmEy~~gg~L~~~i~~~~--~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1          87 VMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EEECCCSEEHHHHHHSCS--CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEECCCCCcHHHHHHhcC--CCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeec
Confidence            9999995 9999997521  346999999999999999999999998            000    00001         


Q ss_pred             -------hhcCCCCHHH---------------hh---------hhCCCCCCCC----C----CCCCCC--ccccccccCC
Q 019844          212 -------KVLGTPTREE---------------IK---------CMNPNYTEFK----F----PQIKPH--PWHKVFQKRL  250 (335)
Q Consensus       212 -------~~~g~~~~~~---------------~~---------~~~~~~~~~~----~----~~~~~~--~~~~~~~~~~  250 (335)
                             ..+|++.+..               |.         .+.+.|....    .    ..+...  .+....+..+
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  244 (335)
T d2ozaa1         165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV  244 (335)
T ss_dssp             CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred             cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence                   1123332110               00         0111110000    0    000000  1111122468


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHHhcCcccccC
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEACVHPFFDEL  284 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~L~hp~f~~~  284 (335)
                      |+++++||++||+.||++|||+.|+|+||||.+.
T Consensus       245 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  278 (335)
T d2ozaa1         245 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS  278 (335)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence            9999999999999999999999999999999754

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-34  Score=248.39  Aligned_cols=195  Identities=19%  Similarity=0.247  Sum_probs=143.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----------chhHHHHHHHHHhCC--CCceeeeceeeeeCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----------KRYKNRELQIMQMLD--HPNIVALKHCFFSTTD  149 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----------~~~~~~Ei~~l~~l~--hpnIv~~~~~~~~~~~  149 (335)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+.          ...+.+|+.+|+.++  |||||+++++|     
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~-----   78 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF-----   78 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE-----
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEE-----
Confidence            4699999999999999999999999999999999642          134679999999996  89999999999     


Q ss_pred             CCccEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------c--ChHHhHhhh
Q 019844          150 KEELYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------V--DQLVEIIKV  213 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~--~~~~~~~~~  213 (335)
                      .+...+|+||||+.|  ++.+++..    ...+++.+++.|+.||+.||+|||+++            +  +.....+..
T Consensus        79 ~~~~~~~lv~e~~~~~~~l~~~~~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          79 ERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             ECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             eeCCeEEEEEEeccCcchHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECc
Confidence            556669999999973  88888876    567999999999999999999999998            1  110111111


Q ss_pred             ---------------cCCCCH---HHhhhhCCCCC------------------CCCCCCCCC-CccccccccCCChHHHH
Q 019844          214 ---------------LGTPTR---EEIKCMNPNYT------------------EFKFPQIKP-HPWHKVFQKRLPPEAVD  256 (335)
Q Consensus       214 ---------------~g~~~~---~~~~~~~~~~~------------------~~~~~~~~~-~~~~~~~~~~~s~~~~~  256 (335)
                                     .||+.+   +.+.. ...+.                  ...+..... ......++..+|+++++
T Consensus       155 FG~a~~~~~~~~~~~~GT~~y~aPE~~~~-~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~~~~~~~s~~~~~  233 (273)
T d1xwsa_         155 FGSGALLKDTVYTDFDGTRVYSPPEWIRY-HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH  233 (273)
T ss_dssp             CTTCEECCSSCBCCCCSCGGGSCHHHHHH-SCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHH
T ss_pred             cccceecccccccccccCCCcCCHHHHcC-CCCCCcccccccceeeehhHhhCCCCCCCchHHhhcccCCCCCCCHHHHH
Confidence                           233321   11110 00000                  000000000 00012345679999999


Q ss_pred             HHHHhccCCCCCCCCHHHHhcCcccccCCC
Q 019844          257 LVCRFFQYSPNLRCTALEACVHPFFDELRD  286 (335)
Q Consensus       257 li~~~L~~dP~~R~t~~~~L~hp~f~~~~~  286 (335)
                      ||++||+.||++|||++|+|+||||++...
T Consensus       234 li~~~L~~dp~~R~s~~eil~hp~~~~~~~  263 (273)
T d1xwsa_         234 LIRWCLALRPSDRPTFEEIQNHPWMQDVLL  263 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred             HHHHHccCCHhHCcCHHHHhcCHhhCCCCC
Confidence            999999999999999999999999997643

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=6.3e-34  Score=254.92  Aligned_cols=196  Identities=22%  Similarity=0.312  Sum_probs=143.3

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHH---HHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNR---ELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~---Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      ++|+++++||+|+||.||+|+++.+|+.||||++.+..       ..+.+   |+.+++.++|||||+++++|     ..
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~-----~~   78 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HT   78 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE-----EC
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEE-----EE
Confidence            46999999999999999999999999999999996421       22333   46777788999999999999     55


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh--HH--------
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ--LV--------  208 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~--~~--------  208 (335)
                      ...+|||||||+| +|.+++..    ...+++..++.|+.||+.||.|||+++            ++.  ..        
T Consensus        79 ~~~~~ivmE~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla  154 (364)
T d1omwa3          79 PDKLSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA  154 (364)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTC
T ss_pred             CCEEEEEEEecCCCcHHHHHHh----cccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeecee
Confidence            6669999999995 99999986    677999999999999999999999998            000  00        


Q ss_pred             ------hHhhhcCCCCHHHhhhh--CCCCCC------------------CCCCCCCCC----------ccccccccCCCh
Q 019844          209 ------EIIKVLGTPTREEIKCM--NPNYTE------------------FKFPQIKPH----------PWHKVFQKRLPP  252 (335)
Q Consensus       209 ------~~~~~~g~~~~~~~~~~--~~~~~~------------------~~~~~~~~~----------~~~~~~~~~~s~  252 (335)
                            .....+||+.+......  ...|..                  ..+......          .....++..+|+
T Consensus       155 ~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~  234 (364)
T d1omwa3         155 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSP  234 (364)
T ss_dssp             EECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCH
T ss_pred             eecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCH
Confidence                  01122344442221111  111111                  011110000          111234567999


Q ss_pred             HHHHHHHHhccCCCCCCCC-----HHHHhcCcccccCCC
Q 019844          253 EAVDLVCRFFQYSPNLRCT-----ALEACVHPFFDELRD  286 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t-----~~~~L~hp~f~~~~~  286 (335)
                      ++++||.+||+.||++|||     |+++|+||||+.+.+
T Consensus       235 ~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~  273 (364)
T d1omwa3         235 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  273 (364)
T ss_dssp             HHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCH
Confidence            9999999999999999999     799999999998754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.2e-34  Score=254.24  Aligned_cols=113  Identities=27%  Similarity=0.376  Sum_probs=98.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .++|+++++||+|+||+||+|+++.+|+.||||++++. .+.+.+|+.+|+.+. ||||++++++|..   ....++|+|
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~---~~~~~~~~v  110 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKD---PVSRTPALV  110 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTCSEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEe---cCCCceeEE
Confidence            35799999999999999999999999999999999754 356789999999995 9999999999853   234558899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||.+ +|..+       .+.+++..++.++.||+.||+|||++|
T Consensus       111 ~e~~~~~~L~~~-------~~~l~e~~i~~i~~qil~aL~~LH~~g  149 (328)
T d3bqca1         111 FEHVNNTDFKQL-------YQTLTDYDIRFYMYEILKALDYCHSMG  149 (328)
T ss_dssp             EECCCSCBGGGT-------TTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeecCCCcHHHH-------hcCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence            999996 77544       346999999999999999999999999

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.1e-32  Score=239.56  Aligned_cols=120  Identities=29%  Similarity=0.438  Sum_probs=96.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCC---CC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTD---KE  151 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~---~~  151 (335)
                      .++|+++++||+|+||+||+|+++.+|+.||||++...      ...+.+|+.+|+.++||||+++++++.....   ..
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            46799999999999999999999999999999998532      2456799999999999999999999854321   23


Q ss_pred             ccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..++|+|||||.+++......   ....+++..++.|+.||+.||.|||+++
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~---~~~~~~~~~~~~i~~qil~~l~~lH~~~  137 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQMLLNGLYYIHRNK  137 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC---TTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEeccCCCccchhhh---cccccccHHHHHHHHHHHHHHHHhccCC
Confidence            456899999999755443332   2567999999999999999999999998

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.97  E-value=1.8e-32  Score=237.05  Aligned_cols=119  Identities=25%  Similarity=0.227  Sum_probs=104.4

Q ss_pred             ceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-------hhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           80 QKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-------RYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        80 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-------~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..++|++.+.||+|+||+||+|+++.+|+.||||+++++.       ..+.+|+.+|+.++|||||++++++.... ...
T Consensus         5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~-~~~   83 (277)
T d1o6ya_           5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAG   83 (277)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC-SSS
T ss_pred             ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc-CCC
Confidence            3467999999999999999999999999999999996432       34679999999999999999999996543 334


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+|||||||+| +|.+++..    .+.+++.+++.|+.||+.||+|||++|
T Consensus        84 ~~~~lvmE~~~g~~L~~~~~~----~~~l~~~~~~~i~~qi~~al~~lH~~~  131 (277)
T d1o6ya_          84 PLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG  131 (277)
T ss_dssp             EEEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceEEEEEECCCCCEehhhhcc----cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            568899999996 99988876    667999999999999999999999998

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=2.3e-32  Score=237.21  Aligned_cols=116  Identities=21%  Similarity=0.350  Sum_probs=103.0

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++++.||+|+||+||+|+++.+++.||||+++.+   .+.+.+|+.+|+.++|||||++++++     .+...+||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~-----~~~~~~~i   90 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREPPFYI   90 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSCEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccE-----eeCCeeEE
Confidence            45699999999999999999999999999999999653   35678999999999999999999999     44555889


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||++ +|.+++....  ...+++..++.|+.||+.||+|||+++
T Consensus        91 v~E~~~~g~l~~~l~~~~--~~~~~~~~~~~i~~qi~~gL~yLH~~~  135 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN  135 (287)
T ss_dssp             EEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeecccCcchHHHhhhcc--ccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999995 9999987632  467999999999999999999999998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1e-31  Score=236.75  Aligned_cols=197  Identities=23%  Similarity=0.333  Sum_probs=143.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEE---cCCCcEEEEEEeccc--------chhHHHHHHHHHhCCC-CceeeeceeeeeCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKC---RETGEIVAIKKVLQD--------KRYKNRELQIMQMLDH-PNIVALKHCFFSTT  148 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~---~~~~~~vAvK~i~~~--------~~~~~~Ei~~l~~l~h-pnIv~~~~~~~~~~  148 (335)
                      .++|++++.||+|+||+||+|++   +.+|+.||||++.+.        .+.+.+|+.+|++++| |||+++++++    
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~----   98 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF----   98 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE----
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeee----
Confidence            36799999999999999999997   447899999998532        2457799999999966 8999999999    


Q ss_pred             CCCccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------------------
Q 019844          149 DKEELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------------------  203 (335)
Q Consensus       149 ~~~~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------------------  203 (335)
                       .+..+++++||||.| +|.+++..    .+.+++..++.++.||+.||+|||+++                        
T Consensus        99 -~~~~~~~~v~e~~~~~~L~~~i~~----~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DF  173 (322)
T d1vzoa_          99 -QTETKLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDF  173 (322)
T ss_dssp             -EETTEEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred             -ccCCceeeeeecccccHHHHHHHh----cccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeec
Confidence             556669999999996 99999887    667899999999999999999999998                        


Q ss_pred             -------cChHHhHhhhcCCCC---HHHhhhhCCCCC--------------------CCCCCCCCCC---------cccc
Q 019844          204 -------VDQLVEIIKVLGTPT---REEIKCMNPNYT--------------------EFKFPQIKPH---------PWHK  244 (335)
Q Consensus       204 -------~~~~~~~~~~~g~~~---~~~~~~~~~~~~--------------------~~~~~~~~~~---------~~~~  244 (335)
                             ...........|++.   ++.+......|.                    +|........         ....
T Consensus       174 G~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~  253 (322)
T d1vzoa_         174 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP  253 (322)
T ss_dssp             SEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC
T ss_pred             cchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCC
Confidence                   000111112233333   111111100111                    0110000000         0112


Q ss_pred             ccccCCChHHHHHHHHhccCCCCCCC-----CHHHHhcCcccccCCC
Q 019844          245 VFQKRLPPEAVDLVCRFFQYSPNLRC-----TALEACVHPFFDELRD  286 (335)
Q Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~-----t~~~~L~hp~f~~~~~  286 (335)
                      .++..+|+++.+||.+||++||.+||     |++|+|+||||+++.+
T Consensus       254 ~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~  300 (322)
T d1vzoa_         254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW  300 (322)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCH
T ss_pred             CCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCH
Confidence            34567899999999999999999999     5899999999998753

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-31  Score=226.67  Aligned_cols=113  Identities=23%  Similarity=0.288  Sum_probs=98.8

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ++|+++++||+|+||+||+|+++ +++.||||++++.   ...+.+|+.+++.++|||||++++++     .+...+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~-----~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE-----CCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEE-----eeCCceEEE
Confidence            45999999999999999999984 7889999999753   35688999999999999999999999     444458999


Q ss_pred             eecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||+ |+|..++...   ...+++..++.|+.||+.||.|||+++
T Consensus        78 ~Ey~~~g~l~~~~~~~---~~~~~~~~~~~i~~qi~~gl~~LH~~~  120 (258)
T d1k2pa_          78 TEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ  120 (258)
T ss_dssp             EECCTTEEHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEccCCCcHHHhhhcc---ccCCcHHHHHHHHHHHHHHHHHHhhcC
Confidence            99998 5888886642   456999999999999999999999998

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.1e-31  Score=225.52  Aligned_cols=113  Identities=21%  Similarity=0.340  Sum_probs=98.7

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      ++|++++.||+|+||.||+|+++ +++.||||++++.   .+.+.+|+.+++.++|||||++++++.     ....+|+|
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-----~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceec-----cCCceEEE
Confidence            35999999999999999999985 6778999999753   356789999999999999999999994     44458899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++ +|.+++...   ...+++..+..|+.||+.||+|||+++
T Consensus        79 ~E~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qia~gl~~lH~~~  121 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC  121 (263)
T ss_dssp             EECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEecCCCcHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHhhhccc
Confidence            999995 999988752   456899999999999999999999998

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.8e-31  Score=227.88  Aligned_cols=194  Identities=23%  Similarity=0.239  Sum_probs=134.7

Q ss_pred             eeeeEEeee-eeccCceEEEEEEEcC--CCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHV-VGTGSFGVVFQAKCRE--TGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~-lG~G~fg~V~~~~~~~--~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .++|.+.+. ||+|+||+||+|.++.  ++..||||+++..     .+.+.+|+.+|++++|||||++++++.     .+
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~-----~~   81 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-----AE   81 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----SS
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeec-----cC
Confidence            356888885 9999999999998764  3457999999643     245789999999999999999999883     22


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hHHhHh-------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QLVEII-------  211 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~~~~~-------  211 (335)
                       .+|||||||+| +|.+++..   .+..+++..+..|+.||+.||+|||+++            ++ .....+       
T Consensus        82 -~~~lvmE~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~  157 (285)
T d1u59a_          82 -ALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK  157 (285)
T ss_dssp             -SEEEEEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             -eEEEEEEeCCCCcHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhh
Confidence             27899999995 99998754   2457999999999999999999999998            00 000000       


Q ss_pred             -------------hhcCCCC---HHHh----------------------hhhCCCCCCCCCCCCC---CCccccccccCC
Q 019844          212 -------------KVLGTPT---REEI----------------------KCMNPNYTEFKFPQIK---PHPWHKVFQKRL  250 (335)
Q Consensus       212 -------------~~~g~~~---~~~~----------------------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  250 (335)
                                   ...|++.   |+.+                      ..+.+.|.......+.   .......+|..+
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~  237 (285)
T d1u59a_         158 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC  237 (285)
T ss_dssp             ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTC
T ss_pred             cccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcC
Confidence                         0112221   2211                      1112222211100000   001122355789


Q ss_pred             ChHHHHHHHHhccCCCCCCCCHHHH---hcCccccc
Q 019844          251 PPEAVDLVCRFFQYSPNLRCTALEA---CVHPFFDE  283 (335)
Q Consensus       251 s~~~~~li~~~L~~dP~~R~t~~~~---L~hp~f~~  283 (335)
                      |+++.+||.+||..||++|||+.++   |+|+|+.-
T Consensus       238 ~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            9999999999999999999999877   67888754

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.7e-31  Score=223.70  Aligned_cols=115  Identities=23%  Similarity=0.340  Sum_probs=98.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLV  158 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv  158 (335)
                      .++|++++.||+|+||.||+|.++  |..||||+++++  .+.+.+|+.+|++++|||||++++++..    ....+|+|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~----~~~~~~lv   79 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLYIV   79 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECC----C--CCEEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEe----cCCcEEEE
Confidence            346999999999999999999984  788999999754  3568899999999999999999998853    22347899


Q ss_pred             eecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          159 LEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       159 ~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||||++ +|.+++....  ...+++..+..|+.||+.||.|||+++
T Consensus        80 ~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~al~ylH~~~  123 (262)
T d1byga_          80 TEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNN  123 (262)
T ss_dssp             ECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHhhccccccCc
Confidence            999995 9999997643  345899999999999999999999988

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-31  Score=227.35  Aligned_cols=194  Identities=20%  Similarity=0.201  Sum_probs=137.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++++.||+|+||.||+|+++ ++..||||++...   .+.+.+|+.+|++++|||||++++++.     +. .+||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-----~~-~~~i   84 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-----QE-PIYI   84 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SS-SCEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeec-----cC-CeEE
Confidence            457999999999999999999985 6788999999643   356789999999999999999999872     22 2679


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cC-hHHhHhhh----------
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VD-QLVEIIKV----------  213 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~-~~~~~~~~----------  213 (335)
                      |||||++ +|.+++....  ...+++..+..|+.||+.||.|||+++            ++ .....+..          
T Consensus        85 v~Ey~~~g~L~~~~~~~~--~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~  162 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (272)
T ss_dssp             EEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             EEEeCCCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCC
Confidence            9999995 9988776433  346999999999999999999999998            00 00000111          


Q ss_pred             --------cCCCC---HHHhhh----------------------hCCCCCCCCCCC---CCCCccccccccCCChHHHHH
Q 019844          214 --------LGTPT---REEIKC----------------------MNPNYTEFKFPQ---IKPHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       214 --------~g~~~---~~~~~~----------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l  257 (335)
                              .|++.   ++.+..                      +.|.+.......   .-........+..+++++.+|
T Consensus       163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l  242 (272)
T d1qpca_         163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQL  242 (272)
T ss_dssp             CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHH
Confidence                    22221   221110                      111111000000   000011223456789999999


Q ss_pred             HHHhccCCCCCCCCHHHHhc--Cccccc
Q 019844          258 VCRFFQYSPNLRCTALEACV--HPFFDE  283 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~--hp~f~~  283 (335)
                      |.+||+.||++|||+.++++  |+||..
T Consensus       243 i~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         243 MRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            99999999999999999998  888863

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.9e-31  Score=226.29  Aligned_cols=106  Identities=23%  Similarity=0.291  Sum_probs=90.8

Q ss_pred             eeeeccCceEEEEEEEc--CCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           88 HVVGTGSFGVVFQAKCR--ETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        88 ~~lG~G~fg~V~~~~~~--~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      ++||+|+||+||+|.++  .+++.||||+++..      .+.+.+|+.+|++++|||||++++++.     .+. +||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~-----~~~-~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-----AES-WMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----SSS-EEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEec-----cCC-EEEEE
Confidence            57999999999999864  45678999999642      245789999999999999999999883     222 67999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||+| +|.+++..    ...+++..+..|+.||+.||+|||+++
T Consensus        87 E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~gl~ylH~~~  127 (277)
T d1xbba_          87 EMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN  127 (277)
T ss_dssp             ECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EcCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHhhHHhCC
Confidence            99995 99999886    677999999999999999999999998

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.7e-30  Score=226.68  Aligned_cols=114  Identities=23%  Similarity=0.384  Sum_probs=96.6

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc---EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE---IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~---~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      .+|++.++||+|+||+||+|+++.+++   .||||.+...     .+.+.+|+.+|++++|||||++++++     ....
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~-----~~~~  100 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV-----TKST  100 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CSSS
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEE-----eeCC
Confidence            469999999999999999999987765   5899988542     24578999999999999999999999     4444


Q ss_pred             EEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          154 YLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .+|+|||||+| +|.+++...   .+.+++.++..|+.||+.||.|||+++
T Consensus       101 ~~~iv~Ey~~~g~L~~~~~~~---~~~l~~~~~~~i~~qia~gl~yLH~~~  148 (299)
T d1jpaa_         101 PVMIITEFMENGSLDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLADMN  148 (299)
T ss_dssp             SCEEEEECCTTEEHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEEecCCCcceeeeccc---cCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            58899999996 999887752   456999999999999999999999998

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.2e-30  Score=222.29  Aligned_cols=195  Identities=22%  Similarity=0.261  Sum_probs=138.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc---chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD---KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~---~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .++|++++.||+|+||+||+|+++.+ +.||||++...   .+.+.+|+.+|+.++|||||++++++.     ++. +|+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-----~~~-~~l   88 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-----EEP-IYI   88 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSS-CEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEe-----cCC-eEE
Confidence            35799999999999999999999654 57999999643   356889999999999999999999882     222 679


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cCh-HHhHhhhcCCCC-----
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQ-LVEIIKVLGTPT-----  218 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~-~~~~~~~~g~~~-----  218 (335)
                      |||||++ +|..++....  ...+++.+++.|+.||+.||+|||+++            ++. ....+..+|...     
T Consensus        89 v~Ey~~~g~l~~~~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~  166 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  166 (285)
T ss_dssp             EECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             EEEecCCCchhhhhhhcc--cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCC
Confidence            9999995 8888876533  456999999999999999999999998            111 111112222211     


Q ss_pred             ----------------HHHhhh----------------------hCCCCCCCCCCC---CCCCccccccccCCChHHHHH
Q 019844          219 ----------------REEIKC----------------------MNPNYTEFKFPQ---IKPHPWHKVFQKRLPPEAVDL  257 (335)
Q Consensus       219 ----------------~~~~~~----------------------~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~l  257 (335)
                                      ++.+..                      +.|.+.......   .........++..+++++++|
T Consensus       167 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~l  246 (285)
T d1fmka3         167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL  246 (285)
T ss_dssp             ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred             CceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHH
Confidence                            111110                      001000000000   000011223557889999999


Q ss_pred             HHHhccCCCCCCCCHHHHhc--CcccccC
Q 019844          258 VCRFFQYSPNLRCTALEACV--HPFFDEL  284 (335)
Q Consensus       258 i~~~L~~dP~~R~t~~~~L~--hp~f~~~  284 (335)
                      |.+||+.||++|||++++++  ++||+..
T Consensus       247 i~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         247 MCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            99999999999999999988  8888765

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.7e-30  Score=227.30  Aligned_cols=193  Identities=16%  Similarity=0.155  Sum_probs=134.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCc-----EEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGE-----IVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|+++++||+|+||+||+|+++.+++     .||+|.+...     ...+.+|+.+|+++ +|||||++++++     
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~-----  110 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC-----  110 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE-----
Confidence            3579999999999999999999876554     6999998532     24577999999998 899999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh-------------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC------
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR-------------------IHQRMPLIYVKLYTYQICRALAYIHNCI------  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~-------------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~------  203 (335)
                      .....+|||||||+| +|.+++.....                   ....+++..++.|+.||+.||+|||+++      
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDl  190 (325)
T d1rjba_         111 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  190 (325)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            455558999999995 99999975321                   1235899999999999999999999998      


Q ss_pred             --------------cCh--HHh----------HhhhcCCCC---HHHhh----------------------hhCCCCCCC
Q 019844          204 --------------VDQ--LVE----------IIKVLGTPT---REEIK----------------------CMNPNYTEF  232 (335)
Q Consensus       204 --------------~~~--~~~----------~~~~~g~~~---~~~~~----------------------~~~~~~~~~  232 (335)
                                    +..  +..          .....||+.   |+.+.                      .+.+.|...
T Consensus       191 Kp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~  270 (325)
T d1rjba_         191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  270 (325)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             chhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCC
Confidence                          000  000          001122322   22211                      111111111


Q ss_pred             CCCC----CCCCccccccccCCChHHHHHHHHhccCCCCCCCCHHHHhcC
Q 019844          233 KFPQ----IKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVH  278 (335)
Q Consensus       233 ~~~~----~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~h  278 (335)
                      ....    +....+....|..+|+++++||.+||+.||++|||++||++|
T Consensus       271 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         271 PVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            0000    000112233556889999999999999999999999999976

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.8e-30  Score=219.88  Aligned_cols=189  Identities=21%  Similarity=0.229  Sum_probs=131.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC---cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG---EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .++|++++.||+|+||.||+|++..++   ..||||.+...     ...+.+|+.+|+.++|||||++++++.     + 
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-----~-   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-----E-   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----S-
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-----c-
Confidence            457999999999999999999987553   46899988532     245779999999999999999999982     2 


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------cC------
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------VD------  205 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------~~------  205 (335)
                      ..+|+|||||++ +|.+++...   ...+++..++.++.||+.||.|||+++                    +.      
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~---~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~  156 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  156 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred             CeEEEEEEeccCCcHHhhhhcc---CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhhe
Confidence            237899999995 898877652   457999999999999999999999998                    00      


Q ss_pred             -----hHHhHhhhcCCCC---HHHhh----------------------hhCCCCCCCCCCCCC---CCccccccccCCCh
Q 019844          206 -----QLVEIIKVLGTPT---REEIK----------------------CMNPNYTEFKFPQIK---PHPWHKVFQKRLPP  252 (335)
Q Consensus       206 -----~~~~~~~~~g~~~---~~~~~----------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~s~  252 (335)
                           .........|++.   ++.+.                      .+.+.+.........   .......++..+|+
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~  236 (273)
T d1mp8a_         157 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP  236 (273)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCH
T ss_pred             eccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence                 0000011122222   12111                      111111111000000   00111235678999


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHhcC
Q 019844          253 EAVDLVCRFFQYSPNLRCTALEACVH  278 (335)
Q Consensus       253 ~~~~li~~~L~~dP~~R~t~~~~L~h  278 (335)
                      ++.+||.+||+.||++|||+.++++|
T Consensus       237 ~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         237 TLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999999876

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.4e-30  Score=223.81  Aligned_cols=192  Identities=22%  Similarity=0.307  Sum_probs=135.1

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcE--EEEEEecc-----cchhHHHHHHHHHhC-CCCceeeeceeeeeCCCCCcc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEI--VAIKKVLQ-----DKRYKNRELQIMQML-DHPNIVALKHCFFSTTDKEEL  153 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~--vAvK~i~~-----~~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~~~~~  153 (335)
                      ++|++.++||+|+||.||+|+++.+|..  ||||.+..     ..+.+.+|+.+|+++ +|||||++++++     ....
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE-----EETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEE-----ecCC
Confidence            5799999999999999999999888875  67787743     234678999999999 799999999999     4455


Q ss_pred             EEEEEeecchh-hHHHHHHHHh------------hhcCCCCHHHHHHHHHHHHHHHHHHHhCC------------cChH-
Q 019844          154 YLNLVLEYVPE-TVNRIARNYS------------RIHQRMPLIYVKLYTYQICRALAYIHNCI------------VDQL-  207 (335)
Q Consensus       154 ~~~iv~e~~~g-~L~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~~------------~~~~-  207 (335)
                      .+|||||||+| +|.+++....            .....+++..+..++.||+.||.|||+++            ++.. 
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC
Confidence            69999999995 9999987421            12367999999999999999999999998            0000 


Q ss_pred             HhHh----------------hhcCCCC---HHHhh----------------------hhCCCCCCCCCCCC---CCCccc
Q 019844          208 VEII----------------KVLGTPT---REEIK----------------------CMNPNYTEFKFPQI---KPHPWH  243 (335)
Q Consensus       208 ~~~~----------------~~~g~~~---~~~~~----------------------~~~~~~~~~~~~~~---~~~~~~  243 (335)
                      ...+                ...|++.   ++.+.                      ...+.+.......+   -.....
T Consensus       165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~  244 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  244 (309)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred             ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCC
Confidence            0000                1122222   22111                      01111111000000   000112


Q ss_pred             cccccCCChHHHHHHHHhccCCCCCCCCHHHHhcC
Q 019844          244 KVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVH  278 (335)
Q Consensus       244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~L~h  278 (335)
                      ...+..+++++++||.+||+.||++|||+.++++|
T Consensus       245 ~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         245 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            33456789999999999999999999999999987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8.5e-29  Score=217.79  Aligned_cols=189  Identities=16%  Similarity=0.204  Sum_probs=129.4

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCc----EEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGE----IVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~----~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      .+|+++++||+|+||+||+|.++.+|+    .||+|.+...     .+.+.+|+.+|++++|||||++++++..     .
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-----~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-----S   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-----S
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----C
Confidence            359999999999999999999988876    5888887532     3467899999999999999999999843     2


Q ss_pred             cEEEEEeecch-hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC--------------------c--ChHHh
Q 019844          153 LYLNLVLEYVP-ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI--------------------V--DQLVE  209 (335)
Q Consensus       153 ~~~~iv~e~~~-g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~--------------------~--~~~~~  209 (335)
                      . .+++|||+. |+|.+.+...   ...+++..++.|+.||+.||+|||+++                    +  -.+..
T Consensus        84 ~-~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_          84 T-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             C-eeEEEEeccCCccccccccc---ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccce
Confidence            2 557788887 5888877652   567999999999999999999999998                    0  00000


Q ss_pred             ----------HhhhcCCCC---HHHhhh----------------------hCCCCCCCCCCCCC---CCccccccccCCC
Q 019844          210 ----------IIKVLGTPT---REEIKC----------------------MNPNYTEFKFPQIK---PHPWHKVFQKRLP  251 (335)
Q Consensus       210 ----------~~~~~g~~~---~~~~~~----------------------~~~~~~~~~~~~~~---~~~~~~~~~~~~s  251 (335)
                                .....|++.   ++.+..                      +.+.|.......+.   ........+..++
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~  239 (317)
T d1xkka_         160 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT  239 (317)
T ss_dssp             HTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBC
T ss_pred             ecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccC
Confidence                      011123332   222111                      11111111000000   0001123456789


Q ss_pred             hHHHHHHHHhccCCCCCCCCHHHHhcCc
Q 019844          252 PEAVDLVCRFFQYSPNLRCTALEACVHP  279 (335)
Q Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~~L~hp  279 (335)
                      +++.+||.+||+.||++|||+.++++|-
T Consensus       240 ~~~~~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         240 IDVYMIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence            9999999999999999999999999883

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=8e-29  Score=217.38  Aligned_cols=118  Identities=20%  Similarity=0.260  Sum_probs=99.2

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|+++++||+|+||.||+|+++     .+++.||||++++..     ..+.+|+.+++.+ +|||||++++++     
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~-----   96 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC-----   96 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE-----
Confidence            467999999999999999999863     466789999996432     3567899999999 799999999999     


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh--------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR--------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~--------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      .....+|||||||+| +|.+++.....              ....+++..++.|+.||+.||+|||+++
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~  165 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN  165 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            444558899999995 99999876321              1236999999999999999999999998

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-28  Score=212.53  Aligned_cols=114  Identities=20%  Similarity=0.317  Sum_probs=96.2

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCC----cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCc
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETG----EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~----~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~  152 (335)
                      ..|.+.++||+|+||.||+|.++.++    ..||||++...     ...+.+|+.+|+.++|||||++++++     ...
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~-----~~~   81 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SKY   81 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEE-----ecC
Confidence            35999999999999999999987655    47999998642     23577999999999999999999999     444


Q ss_pred             cEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ..+++|||||.+ ++.+++...   ...+++.++..|+.||+.||+|||+++
T Consensus        82 ~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~i~~gl~~lH~~~  130 (283)
T d1mqba_          82 KPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANMN  130 (283)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CceEEEEEecccCcchhhhhcc---cccccHHHHHHHHHHHHHhhhhccccc
Confidence            458899999996 888777652   467999999999999999999999988

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-29  Score=214.82  Aligned_cols=111  Identities=18%  Similarity=0.247  Sum_probs=94.3

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELY  154 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~  154 (335)
                      .++|++++.||+|+||+||+|+.+   ..||||+++..      .+.+.+|+.+|++++|||||++++++.     . ..
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-----~-~~   77 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-----A-PQ   77 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----S-SS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-----c-cE
Confidence            356999999999999999999863   46999998632      245779999999999999999999862     2 23


Q ss_pred             EEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          155 LNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       155 ~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||||||+| +|.+++...   ...+++..+..|+.||+.||+|||+++
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~gl~yLH~~~  124 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS  124 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEecCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            7899999995 999998742   456999999999999999999999998

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.7e-29  Score=214.11  Aligned_cols=113  Identities=25%  Similarity=0.319  Sum_probs=88.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCC-C--cEEEEEEeccc-------chhHHHHHHHHHhCCCCceeeeceeeeeCCCCC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRET-G--EIVAIKKVLQD-------KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKE  151 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~-~--~~vAvK~i~~~-------~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~  151 (335)
                      .+|++.+.||+|+||.||+|++..+ +  ..||||++.+.       .+.+.+|+.+|+.++|||||++++++.     +
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~-----~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-----T   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----e
Confidence            4599999999999999999987533 3  36899988642       245789999999999999999999993     2


Q ss_pred             ccEEEEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          152 ELYLNLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       152 ~~~~~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      . .+++|||||++ +|.+.+...   .+.+++..+..++.||+.||.|||+++
T Consensus        83 ~-~~~lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~gl~ylH~~~  131 (273)
T d1u46a_          83 P-PMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKR  131 (273)
T ss_dssp             S-SCEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             c-chheeeeeecCcchhhhhhcc---cCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence            2 36799999995 888777653   456999999999999999999999998

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-28  Score=215.83  Aligned_cols=118  Identities=18%  Similarity=0.225  Sum_probs=98.5

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEecccc-----hhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQDK-----RYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~~-----~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|.+++.||+|+||.||+|.++.     ++..||||++.+..     ..+.+|+.++++++|||||++++++     .
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~-----~   93 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV-----S   93 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE-----C
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE-----e
Confidence            4679999999999999999999853     35789999996432     3467999999999999999999999     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHhhh------cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYSRI------HQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~~~------~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+++|||||++ +|.+++......      ...+++..+..|+.||+.||.|||+++
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~  153 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK  153 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence            44458899999995 999998754311      134789999999999999999999998

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.1e-28  Score=215.20  Aligned_cols=118  Identities=20%  Similarity=0.329  Sum_probs=92.8

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCC-------cEEEEEEecccc-----hhHHHHHHHHHhC-CCCceeeeceeeeeC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETG-------EIVAIKKVLQDK-----RYKNRELQIMQML-DHPNIVALKHCFFST  147 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~-------~~vAvK~i~~~~-----~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~  147 (335)
                      .++|++++.||+|+||.||+|++..++       ..||||++.++.     ..+.+|+..+.++ +|||||++++++   
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~---   88 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC---   88 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccc---
Confidence            457999999999999999999986654       379999996532     4466788888888 899999999999   


Q ss_pred             CCCCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          148 TDKEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                        .+...+|+|||||++ +|.+++.....            ....+++..++.|+.||+.||+|||+++
T Consensus        89 --~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~  155 (299)
T d1fgka_          89 --TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK  155 (299)
T ss_dssp             --CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC
Confidence              445558899999995 99999975321            1346899999999999999999999988

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=5.1e-28  Score=216.91  Aligned_cols=117  Identities=29%  Similarity=0.439  Sum_probs=91.5

Q ss_pred             eeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc---hhHHHHHHHHHhCC-----------CCceeeeceeeeeC
Q 019844           82 VSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK---RYKNRELQIMQMLD-----------HPNIVALKHCFFST  147 (335)
Q Consensus        82 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~---~~~~~Ei~~l~~l~-----------hpnIv~~~~~~~~~  147 (335)
                      .||+++++||+|+||+||+|+++.+|+.||||+++++.   ....+|+.+++.++           |+|||++++++...
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            35999999999999999999999999999999997653   45678999988875           47899999988432


Q ss_pred             CCCCccEEEEEeecch--hhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 019844          148 TDKEELYLNLVLEYVP--ETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN-CI  203 (335)
Q Consensus       148 ~~~~~~~~~iv~e~~~--g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~-~~  203 (335)
                         ...+.+++|+++.  ++........  ....+++..++.++.||+.||.|||+ .|
T Consensus        93 ---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~i~~qil~al~~lh~~~~  146 (362)
T d1q8ya_          93 ---GPNGVHVVMVFEVLGENLLALIKKY--EHRGIPLIYVKQISKQLLLGLDYMHRRCG  146 (362)
T ss_dssp             ---ETTEEEEEEEECCCCEEHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ---cccceeeeeeecccccccccccccc--cccCCcHHHHHHHHHHHHHHHHHHhhhcC
Confidence               2233555555554  4444433332  25679999999999999999999997 66

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=5.1e-28  Score=211.27  Aligned_cols=118  Identities=25%  Similarity=0.323  Sum_probs=98.7

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEc-----CCCcEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCR-----ETGEIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDK  150 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~-----~~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~  150 (335)
                      .++|++++.||+|+||+||+|+++     .+++.||||++...     .+.+.+|+.+|+.++||||+++++++     .
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~-----~   86 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC-----A   86 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----C
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee-----c
Confidence            456999999999999999999975     35678999999643     24578999999999999999999999     4


Q ss_pred             CccEEEEEeecchh-hHHHHHHHHh--------------------hhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          151 EELYLNLVLEYVPE-TVNRIARNYS--------------------RIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       151 ~~~~~~iv~e~~~g-~L~~~l~~~~--------------------~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ....+++||||+++ +|.+++....                    .....+++..+..|+.||+.||+|||+++
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~  160 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  160 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC
Confidence            44458899999995 9999987421                    11235899999999999999999999988

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.2e-28  Score=211.15  Aligned_cols=119  Identities=20%  Similarity=0.291  Sum_probs=94.4

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcC-----CCcEEEEEEeccc-----chhHHHHHHHHHhC-CCCceeeeceeeeeCCC
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRE-----TGEIVAIKKVLQD-----KRYKNRELQIMQML-DHPNIVALKHCFFSTTD  149 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~-----~~~~vAvK~i~~~-----~~~~~~Ei~~l~~l-~hpnIv~~~~~~~~~~~  149 (335)
                      .++|+++++||+|+||.||+|++..     +++.||||+++..     .+.+.+|+.++.++ +|+|||.+++++..   
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~---   88 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---   88 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeecc---
Confidence            3579999999999999999999754     4568999998643     24466778877777 68999999998743   


Q ss_pred             CCccEEEEEeecchh-hHHHHHHHHhh------------hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          150 KEELYLNLVLEYVPE-TVNRIARNYSR------------IHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       150 ~~~~~~~iv~e~~~g-~L~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ....+++|||||+| +|.+++.....            ....+++.+++.|+.||+.||+|||+++
T Consensus        89 -~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~  154 (299)
T d1ywna1          89 -PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK  154 (299)
T ss_dssp             -TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence             33448899999995 99999986432            1245899999999999999999999998

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-27  Score=208.77  Aligned_cols=113  Identities=19%  Similarity=0.261  Sum_probs=92.8

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCC---cEEEEEEeccc-----chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEE
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETG---EIVAIKKVLQD-----KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYL  155 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~---~~vAvK~i~~~-----~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  155 (335)
                      +...++||+|+||+||+|++..++   ..||||++++.     .+.+.+|+.+|++++|||||++++++..    ....+
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~----~~~~~  104 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR----SEGSP  104 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE----TTTEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe----cCCce
Confidence            344688999999999999986543   36999998642     2457899999999999999999999753    23458


Q ss_pred             EEEeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          156 NLVLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       156 ~iv~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++|||||++ +|.+++..   ....+++..+..++.|++.||.|||+.+
T Consensus       105 ~lv~E~~~~g~l~~~~~~---~~~~~~~~~~~~i~~qia~gL~~lH~~~  150 (311)
T d1r0pa_         105 LVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKK  150 (311)
T ss_dssp             EEEEECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEEeecCchhhhhcc---ccccchHHHHHHHHHHHHHhhhhhcccC
Confidence            899999996 99888774   2456788899999999999999999988

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=1.6e-26  Score=201.67  Aligned_cols=118  Identities=22%  Similarity=0.240  Sum_probs=97.8

Q ss_pred             cceeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc--chhHHHHHHHHHhCCCCceeeeceeeeeCCCCCccEEE
Q 019844           79 KQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD--KRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLN  156 (335)
Q Consensus        79 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~--~~~~~~Ei~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~  156 (335)
                      +.+++|++++.||+|+||.||+|+++.+|+.||||++...  ...+.+|+++++.++|+|+|..+..+.    ......+
T Consensus         4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~----~~~~~~~   79 (299)
T d1ckia_           4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV   79 (299)
T ss_dssp             EETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEE----EETTEEE
T ss_pred             eECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEE----ecCCEEE
Confidence            3456799999999999999999999999999999988643  356789999999998776555444443    3445688


Q ss_pred             EEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          157 LVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       157 iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      +|||||+|+|...+...   .+.+++..+..++.||+.||+|||++|
T Consensus        80 ivme~~~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~  123 (299)
T d1ckia_          80 MVMELLGPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN  123 (299)
T ss_dssp             EEEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEcCCchhhhhhhc---cCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999998877766542   467999999999999999999999999

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.92  E-value=3.7e-25  Score=192.17  Aligned_cols=115  Identities=22%  Similarity=0.254  Sum_probs=101.6

Q ss_pred             eeeeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecc--cchhHHHHHHHHHhCCC-CceeeeceeeeeCCCCCccEEEE
Q 019844           81 KVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ--DKRYKNRELQIMQMLDH-PNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        81 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~--~~~~~~~Ei~~l~~l~h-pnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      +++|++++.||+|+||+||+|+++.+|+.||||++..  +...+.+|+++++.|.| +||+.+++++     ....+.|+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~~~   78 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHNVL   78 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEe-----ecCCccEE
Confidence            3469999999999999999999999999999999854  34567899999999965 8999999998     55666899


Q ss_pred             EeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      |||||+|+|.+++...   ...+++..+..++.|++.||+|||++|
T Consensus        79 vme~~~~~l~~~~~~~---~~~~~~~~~~~i~~q~~~~l~~lH~~g  121 (293)
T d1csna_          79 VIDLLGPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKS  121 (293)
T ss_dssp             EEECCCCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             EEEecCCCHHHHHHhh---ccchhhHHHHHHHHHHHHHHHHHHHCC
Confidence            9999998999988753   456999999999999999999999999

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.9e-25  Score=190.87  Aligned_cols=112  Identities=23%  Similarity=0.235  Sum_probs=92.6

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc-hhHHHHH--HHHHhCCCCceeeeceeeeeCCCCCccEEEEEe
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK-RYKNREL--QIMQMLDHPNIVALKHCFFSTTDKEELYLNLVL  159 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~-~~~~~Ei--~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~iv~  159 (335)
                      +|.+.+.||+|+||.||+|++  +|+.||||+++.+. ....+|.  ..++.++|||||++++++.... .....+|+||
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~-~~~~~~~lv~   80 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWLVS   80 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCC-CcceEEEEEE
Confidence            599999999999999999987  58999999996543 3333444  4556789999999999997544 3345689999


Q ss_pred             ecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 019844          160 EYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNC  202 (335)
Q Consensus       160 e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~  202 (335)
                      |||.+ +|.+++..     ..+++..+..++.|++.||.|||+.
T Consensus        81 Ey~~~g~L~~~l~~-----~~l~~~~~~~~~~~ia~gl~~lH~~  119 (303)
T d1vjya_          81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             ECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ecccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99985 99999975     4699999999999999999999974

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.50  E-value=2.7e-14  Score=115.02  Aligned_cols=100  Identities=14%  Similarity=0.050  Sum_probs=79.2

Q ss_pred             eEEeeeeeccCceEEEEEEEcCCCcEEEEEEecccc----------------------hhHHHHHHHHHhCCCCceeeec
Q 019844           84 YIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDK----------------------RYKNRELQIMQMLDHPNIVALK  141 (335)
Q Consensus        84 y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~~----------------------~~~~~Ei~~l~~l~hpnIv~~~  141 (335)
                      +.++++||+|+||+||+|.+ .+|+.||||+++...                      ....+|...+..+.|.+++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            46899999999999999998 478999999875210                      1224688899999999999987


Q ss_pred             eeeeeCCCCCccEEEEEeecchhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          142 HCFFSTTDKEELYLNLVLEYVPETVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       142 ~~~~~~~~~~~~~~~iv~e~~~g~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ++.     .    .+++|||+++..          ...+++..+..++.||+.||.|||++|
T Consensus        81 ~~~-----~----~~lvme~~~~~~----------~~~l~~~~~~~i~~ql~~~l~~lH~~g  123 (191)
T d1zara2          81 AWE-----G----NAVLMELIDAKE----------LYRVRVENPDEVLDMILEEVAKFYHRG  123 (191)
T ss_dssp             EEE-----T----TEEEEECCCCEE----------GGGCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred             Eec-----C----CEEEEEeecccc----------ccchhhHHHHHHHHHHHHHHHHHhhCC
Confidence            764     2    259999999732          122566678899999999999999998

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.32  E-value=0.0084  Score=48.37  Aligned_cols=105  Identities=12%  Similarity=0.037  Sum_probs=69.8

Q ss_pred             eeEEeeeeeccCceEEEEEEEcCCCcEEEEEEeccc----chhHHHHHHHHHhCC-CCceeeeceeeeeCCCCCccEEEE
Q 019844           83 SYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQD----KRYKNRELQIMQMLD-HPNIVALKHCFFSTTDKEELYLNL  157 (335)
Q Consensus        83 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~~----~~~~~~Ei~~l~~l~-hpnIv~~~~~~~~~~~~~~~~~~i  157 (335)
                      .|++.+..+-++.+.||+..  ..+..+.+|+....    ...+.+|...+..+. +--+.+++.+.     ...+..|+
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~-----~~~~~~~l   87 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFE-----RHDGWSNL   87 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEE-----EETTEEEE
T ss_pred             ceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEE-----ecCCceEE
Confidence            46666665555667899886  35677888987543    234678999888774 32345555555     33455789


Q ss_pred             Eeecchh-hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          158 VLEYVPE-TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       158 v~e~~~g-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                      ||++++| .+.....         +......++.++...|.-||+..
T Consensus        88 v~~~l~G~~~~~~~~---------~~~~~~~~~~~l~~~l~~lH~~~  125 (263)
T d1j7la_          88 LMSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             EEECCSSEEHHHHTT---------TCSCHHHHHHHHHHHHHHHHTSC
T ss_pred             EEEeccccccccccc---------ccccHHHHHHHHHHHHHHHhccC
Confidence            9999998 6644321         22224456788888999999765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=95.01  E-value=0.084  Score=45.24  Aligned_cols=105  Identities=13%  Similarity=0.068  Sum_probs=62.0

Q ss_pred             eeeeeccCceEEEEEEEcCCCcEEEEEEecc-----------cchhHHHHHHHHHhC-CC--CceeeeceeeeeCCCCCc
Q 019844           87 EHVVGTGSFGVVFQAKCRETGEIVAIKKVLQ-----------DKRYKNRELQIMQML-DH--PNIVALKHCFFSTTDKEE  152 (335)
Q Consensus        87 ~~~lG~G~fg~V~~~~~~~~~~~vAvK~i~~-----------~~~~~~~Ei~~l~~l-~h--pnIv~~~~~~~~~~~~~~  152 (335)
                      .+.||.|....||++.+..+++.++||.-..           ...+..+|...|+.+ .+  ..+.+++.+-     ...
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d-----~~~  105 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-----TEM  105 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-----TTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc-----CCC
Confidence            5578999999999999877788999996432           123456799888877 33  3455555432     222


Q ss_pred             cEEEEEeecchh--hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          153 LYLNLVLEYVPE--TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       153 ~~~~iv~e~~~g--~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                        .++|||++++  .+...+..     +......+..+...++.-+.+.|...
T Consensus       106 --~~lvmE~L~~~~~~~~~l~~-----~~~~~~~a~~lg~~La~~h~~~~~~~  151 (392)
T d2pula1         106 --AVTVMEDLSHLKIARKGLIE-----GENYPHLSQHIGEFLGKTLFYSSDYA  151 (392)
T ss_dssp             --TEEEECCCTTSEEHHHHHHH-----TCCCTTHHHHHHHHHHHHHHHTSTTT
T ss_pred             --CEEEEeccCCcccchhhhcc-----cchhHHHHHHHHHHHHHHHHHhcccc
Confidence              3489999986  44444433     22333444455555555455555544

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=93.68  E-value=0.17  Score=39.89  Aligned_cols=97  Identities=15%  Similarity=0.084  Sum_probs=61.9

Q ss_pred             eeeccC-ceEEEEEEEcCCCcEEEEEEeccc-chhHHHHHHHHHhCCC--CceeeeceeeeeCCCCCccEEEEEeecchh
Q 019844           89 VVGTGS-FGVVFQAKCRETGEIVAIKKVLQD-KRYKNRELQIMQMLDH--PNIVALKHCFFSTTDKEELYLNLVLEYVPE  164 (335)
Q Consensus        89 ~lG~G~-fg~V~~~~~~~~~~~vAvK~i~~~-~~~~~~Ei~~l~~l~h--pnIv~~~~~~~~~~~~~~~~~~iv~e~~~g  164 (335)
                      .+..|. -+.||+... ..+..+.+|.-... ...+.+|...|+.|..  -.+.+++.+.     .+....++||++++|
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~-----~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVV-----TEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEE-----ECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCCCCCceeeec-----ccccceEEEEEeeec
Confidence            344444 357898876 45667888976543 3457789999988843  2245566655     233447899999998


Q ss_pred             -hHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 019844          165 -TVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHNCI  203 (335)
Q Consensus       165 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~  203 (335)
                       ++..         .....   ..++.++...|.-||...
T Consensus        91 ~~~~~---------~~~~~---~~~~~~l~~~la~LH~~~  118 (255)
T d1nd4a_          91 QDLLS---------SHLAP---AEKVSIMADAMRRLHTLD  118 (255)
T ss_dssp             EETTT---------SCCCH---HHHHHHHHHHHHHHTTSC
T ss_pred             ccccc---------ccccH---HHHHHHHHHHHHHHccCC
Confidence             6521         12332   233567788888899765