Query 019845
Match_columns 335
No_of_seqs 196 out of 1482
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 05:00:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019845.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019845hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2234 Predicted UDP-galactos 100.0 1.8E-47 3.9E-52 343.3 34.0 303 3-310 16-327 (345)
2 PF04142 Nuc_sug_transp: Nucle 100.0 1.3E-37 2.9E-42 276.2 24.6 227 65-296 10-244 (244)
3 PF06027 DUF914: Eukaryotic pr 100.0 1.4E-26 3E-31 212.7 29.7 231 70-311 77-311 (334)
4 PLN00411 nodulin MtN21 family 99.9 2E-24 4.3E-29 202.2 33.0 294 2-310 13-333 (358)
5 PF08449 UAA: UAA transporter 99.9 2.3E-23 5E-28 192.1 30.1 264 34-310 32-302 (303)
6 PRK11272 putative DMT superfam 99.9 4E-23 8.7E-28 189.5 31.4 272 4-308 10-288 (292)
7 PRK15430 putative chlorampheni 99.9 2.5E-23 5.4E-28 191.3 29.0 275 2-304 8-284 (296)
8 PRK11453 O-acetylserine/cystei 99.9 1.7E-22 3.7E-27 186.0 31.8 279 2-308 4-290 (299)
9 TIGR00817 tpt Tpt phosphate/ph 99.9 1.3E-22 2.8E-27 187.1 26.3 279 13-309 13-297 (302)
10 KOG3912 Predicted integral mem 99.9 1.1E-22 2.4E-27 176.3 22.1 302 4-306 5-335 (372)
11 PRK11689 aromatic amino acid e 99.9 6.3E-22 1.4E-26 181.9 28.6 274 2-305 4-287 (295)
12 TIGR00950 2A78 Carboxylate/Ami 99.9 1.4E-21 3E-26 176.1 28.9 257 14-300 1-259 (260)
13 PTZ00343 triose or hexose phos 99.9 3.8E-21 8.2E-26 180.5 30.3 280 12-306 59-349 (350)
14 PRK10532 threonine and homoser 99.9 1.1E-20 2.4E-25 173.5 31.6 271 3-309 13-285 (293)
15 TIGR00803 nst UDP-galactose tr 99.9 2.7E-21 5.9E-26 170.4 18.4 221 75-303 2-222 (222)
16 KOG1581 UDP-galactose transpor 99.9 1.3E-20 2.9E-25 165.7 21.4 270 28-309 44-317 (327)
17 TIGR03340 phn_DUF6 phosphonate 99.9 5.3E-19 1.2E-23 161.4 25.5 272 4-302 3-280 (281)
18 COG0697 RhaT Permeases of the 99.8 3.1E-17 6.8E-22 149.4 31.7 280 3-306 8-288 (292)
19 TIGR00688 rarD rarD protein. T 99.8 5E-18 1.1E-22 152.8 26.0 249 2-280 2-255 (256)
20 KOG1580 UDP-galactose transpor 99.8 3.6E-18 7.8E-23 144.9 14.5 259 29-303 47-311 (337)
21 KOG4510 Permease of the drug/m 99.7 5.9E-18 1.3E-22 146.2 6.3 217 75-303 100-323 (346)
22 KOG1443 Predicted integral mem 99.6 4.7E-14 1E-18 124.5 19.8 291 2-307 12-317 (349)
23 TIGR00776 RhaT RhaT L-rhamnose 99.6 6.5E-13 1.4E-17 121.7 27.2 269 3-303 2-286 (290)
24 COG2962 RarD Predicted permeas 99.6 2.7E-12 5.8E-17 113.4 27.3 274 2-306 7-284 (293)
25 KOG1583 UDP-N-acetylglucosamin 99.6 1E-14 2.2E-19 126.9 11.4 229 74-306 66-315 (330)
26 KOG1441 Glucose-6-phosphate/ph 99.5 2.1E-14 4.5E-19 130.8 9.9 221 75-310 86-312 (316)
27 KOG1582 UDP-galactose transpor 99.5 7.4E-13 1.6E-17 115.0 17.9 230 65-308 102-335 (367)
28 KOG1444 Nucleotide-sugar trans 99.5 2.9E-12 6.2E-17 114.7 21.2 287 5-313 15-308 (314)
29 KOG2766 Predicted membrane pro 99.5 1.3E-14 2.9E-19 124.8 2.9 226 65-308 74-302 (336)
30 KOG2765 Predicted membrane pro 99.4 1E-11 2.2E-16 112.8 17.7 220 79-308 166-393 (416)
31 COG5006 rhtA Threonine/homoser 99.3 5.5E-09 1.2E-13 90.5 26.6 215 68-312 70-289 (292)
32 COG2510 Predicted membrane pro 99.3 5.8E-11 1.3E-15 92.0 11.8 138 1-144 2-139 (140)
33 KOG1442 GDP-fucose transporter 99.3 1.4E-12 2.9E-17 113.6 2.2 216 79-307 109-329 (347)
34 COG5070 VRG4 Nucleotide-sugar 99.2 1.4E-09 3E-14 92.3 15.3 279 10-306 10-297 (309)
35 PF03151 TPT: Triose-phosphate 99.1 5.7E-09 1.2E-13 86.2 15.3 141 162-305 1-153 (153)
36 PF00892 EamA: EamA-like trans 99.1 1.2E-09 2.6E-14 86.6 10.6 123 13-143 2-125 (126)
37 PF13536 EmrE: Multidrug resis 99.1 1.6E-09 3.4E-14 85.1 10.1 71 77-148 39-110 (113)
38 KOG4314 Predicted carbohydrate 98.8 1.7E-07 3.7E-12 78.4 12.6 211 80-307 61-278 (290)
39 PRK15051 4-amino-4-deoxy-L-ara 98.7 2.8E-07 6.2E-12 71.9 12.7 65 80-144 45-109 (111)
40 PF06800 Sugar_transport: Suga 98.7 9.6E-06 2.1E-10 72.5 22.0 215 70-301 43-267 (269)
41 TIGR00950 2A78 Carboxylate/Ami 98.6 1.4E-06 3E-11 78.3 15.5 129 3-140 129-260 (260)
42 COG2510 Predicted membrane pro 98.6 4.4E-07 9.4E-12 70.7 9.5 129 163-304 5-138 (140)
43 PF03151 TPT: Triose-phosphate 98.5 3.5E-06 7.7E-11 69.4 14.3 139 4-142 2-151 (153)
44 PF00892 EamA: EamA-like trans 98.5 1.3E-06 2.7E-11 69.0 11.2 121 172-303 2-124 (126)
45 PF05653 Mg_trans_NIPA: Magnes 98.4 1.7E-05 3.8E-10 72.8 15.8 67 80-146 58-124 (300)
46 PRK02971 4-amino-4-deoxy-L-ara 98.3 2.7E-05 5.8E-10 62.3 14.2 122 1-146 1-124 (129)
47 TIGR03340 phn_DUF6 phosphonate 98.3 7.6E-06 1.7E-10 74.6 12.0 63 79-141 218-280 (281)
48 PRK11689 aromatic amino acid e 98.3 2.1E-05 4.5E-10 72.3 14.9 131 4-145 158-288 (295)
49 PLN00411 nodulin MtN21 family 98.3 3E-05 6.6E-10 73.1 15.3 64 83-146 267-330 (358)
50 PRK10532 threonine and homoser 98.2 4.9E-05 1.1E-09 69.8 15.8 132 5-146 151-283 (293)
51 PTZ00343 triose or hexose phos 98.2 4.6E-05 1E-09 71.8 15.2 140 4-143 196-347 (350)
52 TIGR00817 tpt Tpt phosphate/ph 98.2 1.1E-05 2.4E-10 74.4 10.7 140 5-146 148-295 (302)
53 PRK11272 putative DMT superfam 98.2 7.8E-05 1.7E-09 68.4 15.3 133 4-144 152-285 (292)
54 PRK02971 4-amino-4-deoxy-L-ara 98.2 0.00018 3.9E-09 57.6 15.2 121 162-308 3-125 (129)
55 PRK15430 putative chlorampheni 98.1 0.00013 2.9E-09 67.0 15.4 68 79-146 220-287 (296)
56 PRK09541 emrE multidrug efflux 98.1 0.00016 3.6E-09 56.0 12.8 67 79-145 37-104 (110)
57 PRK13499 rhamnose-proton sympo 97.9 0.015 3.4E-07 54.2 25.7 169 4-177 9-190 (345)
58 PRK11453 O-acetylserine/cystei 97.9 0.00039 8.5E-09 64.0 15.2 64 83-146 226-289 (299)
59 PRK10452 multidrug efflux syst 97.9 0.00015 3.2E-09 57.1 9.7 71 76-146 34-105 (120)
60 PRK10452 multidrug efflux syst 97.8 0.00034 7.4E-09 55.0 10.8 67 241-307 38-105 (120)
61 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.00027 6E-09 55.0 9.5 61 243-303 47-107 (111)
62 TIGR00688 rarD rarD protein. T 97.7 0.0022 4.7E-08 57.6 16.4 135 162-303 3-140 (256)
63 PRK11431 multidrug efflux syst 97.7 0.00035 7.7E-09 53.7 9.4 67 77-143 34-101 (105)
64 TIGR00776 RhaT RhaT L-rhamnose 97.7 0.00065 1.4E-08 62.3 12.8 69 76-144 215-288 (290)
65 PRK10650 multidrug efflux syst 97.7 0.00044 9.5E-09 53.5 9.1 67 77-143 40-107 (109)
66 COG2076 EmrE Membrane transpor 97.6 0.00054 1.2E-08 52.2 9.1 69 76-144 34-103 (106)
67 PF08449 UAA: UAA transporter 97.6 0.001 2.2E-08 61.3 13.0 142 3-146 155-299 (303)
68 PF06800 Sugar_transport: Suga 97.6 0.0011 2.3E-08 59.5 12.0 119 2-133 138-256 (269)
69 PRK09541 emrE multidrug efflux 97.5 0.0013 2.9E-08 50.9 10.2 65 243-307 40-105 (110)
70 COG0697 RhaT Permeases of the 97.5 0.0041 8.8E-08 56.2 15.1 71 75-145 217-288 (292)
71 PF13536 EmrE: Multidrug resis 97.4 0.0022 4.7E-08 50.0 10.0 62 245-307 47-108 (113)
72 PF06027 DUF914: Eukaryotic pr 97.2 0.018 3.9E-07 53.6 15.9 63 245-307 91-153 (334)
73 COG2076 EmrE Membrane transpor 97.2 0.0042 9E-08 47.4 9.4 65 242-306 39-104 (106)
74 PRK11431 multidrug efflux syst 97.2 0.0057 1.2E-07 47.0 9.9 63 243-305 39-102 (105)
75 PF05653 Mg_trans_NIPA: Magnes 97.2 0.0068 1.5E-07 55.8 12.2 117 158-304 4-121 (300)
76 PF00893 Multi_Drug_Res: Small 97.1 0.0021 4.6E-08 48.4 7.0 55 80-134 37-92 (93)
77 PRK10650 multidrug efflux syst 97.1 0.0079 1.7E-07 46.5 9.8 62 243-304 45-107 (109)
78 KOG2922 Uncharacterized conser 96.9 0.0087 1.9E-07 54.4 10.2 68 80-147 72-139 (335)
79 PF10639 UPF0546: Uncharacteri 96.9 0.0028 6E-08 49.2 5.9 68 75-142 44-112 (113)
80 KOG1441 Glucose-6-phosphate/ph 96.7 0.0039 8.5E-08 57.4 6.2 140 5-145 166-308 (316)
81 COG5006 rhtA Threonine/homoser 96.6 0.069 1.5E-06 47.1 13.1 57 84-140 222-278 (292)
82 COG2962 RarD Predicted permeas 96.3 0.15 3.2E-06 45.9 13.8 131 8-146 154-285 (293)
83 PF04142 Nuc_sug_transp: Nucle 96.2 0.054 1.2E-06 48.3 10.3 68 243-310 27-94 (244)
84 COG4975 GlcU Putative glucose 96.2 0.00044 9.5E-09 60.3 -2.9 268 1-301 1-281 (288)
85 PF00893 Multi_Drug_Res: Small 96.1 0.032 6.9E-07 41.9 7.5 54 243-296 39-93 (93)
86 TIGR00803 nst UDP-galactose tr 96.0 0.071 1.5E-06 46.7 10.3 65 77-141 157-221 (222)
87 PF04657 DUF606: Protein of un 95.9 0.69 1.5E-05 37.4 15.6 131 163-302 3-138 (138)
88 PF10639 UPF0546: Uncharacteri 95.5 0.042 9.1E-07 42.7 5.9 60 243-302 51-111 (113)
89 PF04657 DUF606: Protein of un 94.3 2.3 5E-05 34.3 14.2 65 77-141 69-138 (138)
90 COG3238 Uncharacterized protei 93.7 3.3 7.1E-05 33.9 15.0 136 161-307 5-148 (150)
91 PRK13499 rhamnose-proton sympo 93.0 4 8.7E-05 38.3 14.1 75 69-144 257-341 (345)
92 COG4975 GlcU Putative glucose 92.7 0.048 1E-06 47.9 1.0 91 37-133 180-270 (288)
93 KOG2765 Predicted membrane pro 92.7 2.1 4.5E-05 40.2 11.5 138 6-147 251-393 (416)
94 COG5070 VRG4 Nucleotide-sugar 92.5 0.63 1.4E-05 40.4 7.5 112 32-144 183-296 (309)
95 PF07857 DUF1632: CEO family ( 92.5 1.2 2.5E-05 40.0 9.5 62 244-305 66-134 (254)
96 KOG2922 Uncharacterized conser 92.4 0.11 2.3E-06 47.5 2.8 72 235-306 66-137 (335)
97 KOG1581 UDP-galactose transpor 92.0 1.2 2.7E-05 40.5 9.0 111 29-142 197-311 (327)
98 KOG1580 UDP-galactose transpor 91.4 0.44 9.6E-06 41.7 5.4 70 77-146 246-315 (337)
99 KOG4510 Permease of the drug/m 91.1 0.71 1.5E-05 41.3 6.4 76 65-140 246-321 (346)
100 KOG1444 Nucleotide-sugar trans 90.1 2.1 4.6E-05 39.2 8.8 141 4-146 159-302 (314)
101 KOG3912 Predicted integral mem 86.3 3.5 7.6E-05 37.2 7.5 61 246-306 99-159 (372)
102 PF06379 RhaT: L-rhamnose-prot 85.8 11 0.00023 35.1 10.7 134 159-307 5-155 (344)
103 COG3238 Uncharacterized protei 84.6 21 0.00045 29.2 11.5 53 92-144 89-146 (150)
104 KOG1443 Predicted integral mem 81.9 36 0.00078 31.3 12.0 75 69-143 240-314 (349)
105 PF04342 DUF486: Protein of un 80.7 3.9 8.5E-05 31.1 4.7 35 269-303 72-106 (108)
106 PRK02237 hypothetical protein; 80.4 3.7 8E-05 31.4 4.5 46 262-307 60-107 (109)
107 PF02694 UPF0060: Uncharacteri 79.8 3.5 7.5E-05 31.5 4.2 46 262-307 58-105 (107)
108 KOG2234 Predicted UDP-galactos 75.7 12 0.00027 34.8 7.4 62 244-305 103-164 (345)
109 KOG4831 Unnamed protein [Funct 71.5 7.6 0.00016 29.6 4.1 67 75-142 55-123 (125)
110 COG3169 Uncharacterized protei 70.7 23 0.0005 26.6 6.4 35 269-303 79-113 (116)
111 PF04342 DUF486: Protein of un 68.7 7.3 0.00016 29.7 3.5 60 82-141 45-105 (108)
112 COG3169 Uncharacterized protei 67.0 15 0.00031 27.6 4.7 31 112-142 83-113 (116)
113 COG1742 Uncharacterized conser 63.0 37 0.0008 25.9 6.2 48 260-307 57-106 (109)
114 KOG4831 Unnamed protein [Funct 62.3 9.5 0.0002 29.1 3.0 42 261-302 81-122 (125)
115 PRK02237 hypothetical protein; 59.9 20 0.00043 27.5 4.4 41 105-145 66-106 (109)
116 KOG1583 UDP-N-acetylglucosamin 56.5 42 0.0009 30.5 6.5 48 96-143 266-313 (330)
117 PF02694 UPF0060: Uncharacteri 55.6 23 0.00051 27.0 4.2 42 104-145 63-104 (107)
118 KOG1442 GDP-fucose transporter 50.9 12 0.00027 33.7 2.4 133 6-141 189-324 (347)
119 KOG4314 Predicted carbohydrate 50.3 30 0.00065 29.7 4.4 53 252-304 72-124 (290)
120 COG1742 Uncharacterized conser 46.1 1.3E+02 0.0029 22.9 7.2 45 102-146 62-106 (109)
121 PF05297 Herpes_LMP1: Herpesvi 43.4 7.8 0.00017 34.9 0.0 96 90-193 41-138 (381)
122 PF11118 DUF2627: Protein of u 43.2 1.2E+02 0.0026 21.7 6.6 52 1-52 1-56 (77)
123 KOG1582 UDP-galactose transpor 35.8 3E+02 0.0065 25.1 8.6 52 95-146 283-334 (367)
124 PRK14774 lipoprotein signal pe 30.5 59 0.0013 27.6 3.3 29 306-334 152-181 (185)
125 PF06570 DUF1129: Protein of u 27.9 3.9E+02 0.0084 22.9 11.1 15 111-125 188-202 (206)
126 PF07857 DUF1632: CEO family ( 27.1 4.6E+02 0.01 23.5 12.5 126 4-144 2-134 (254)
127 TIGR01167 LPXTG_anchor LPXTG-m 25.8 1E+02 0.0022 17.7 2.9 20 285-304 10-29 (34)
128 PF05961 Chordopox_A13L: Chord 23.7 75 0.0016 22.1 2.2 23 288-310 5-27 (68)
129 PF09946 DUF2178: Predicted me 23.3 28 0.0006 26.9 0.1 17 315-331 51-67 (111)
130 PF06123 CreD: Inner membrane 23.2 7E+02 0.015 24.3 11.6 60 118-188 317-378 (430)
131 COG2271 UhpC Sugar phosphate p 22.9 1.4E+02 0.003 29.1 4.6 50 277-326 176-228 (448)
132 TIGR02230 ATPase_gene1 F0F1-AT 20.8 1.4E+02 0.0031 22.6 3.5 34 108-141 54-87 (100)
No 1
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-47 Score=343.33 Aligned_cols=303 Identities=38% Similarity=0.563 Sum_probs=268.8
Q ss_pred hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcC--CC-C----Cccccchhhhhhh
Q 019845 3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRM--PS-S----PKMTTEWRSVRLF 75 (335)
Q Consensus 3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~--~~-~----~~~~~~~~~~~~~ 75 (335)
+|+.++++..++++..+++|+++..++++|.+++++++.|++|+.+|..+.+++.+. .+ . +.+...|++..+.
T Consensus 16 k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~ 95 (345)
T KOG2234|consen 16 KYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKV 95 (345)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHH
Confidence 578899999999999999999997779999999999999999999999998776422 11 1 1223456688889
Q ss_pred hHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCc--cccC
Q 019845 76 PIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGE--ALCD 153 (335)
Q Consensus 76 ~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~--~~~~ 153 (335)
++|+++|+++|+++|.++.|+|++++++..|.++++||++++++|+||++++||.++++.++|+.+++.+..++ +..+
T Consensus 96 ~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~ 175 (345)
T KOG2234|consen 96 SVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSE 175 (345)
T ss_pred HHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999443221 1111
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccch
Q 019845 154 SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN 233 (335)
Q Consensus 154 ~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (335)
....++..|...++.+++.||++++|.||++|+.+.+.|+||.|++.+|++++++.....|+....+ .++|+||+
T Consensus 176 ~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~-----~gff~G~s 250 (345)
T KOG2234|consen 176 SSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINE-----YGFFYGYS 250 (345)
T ss_pred CcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccccc-----CCcccccc
Confidence 2245678999999999999999999999999998889999999999999999999887777765542 45899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCC
Q 019845 234 ITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 310 (335)
Q Consensus 234 ~~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~ 310 (335)
..+|.+++.++.+|++++.++||+|++.|.+++.++++++.+.|+.+||.+||..+++|+.+|+.++++|+..|++.
T Consensus 251 ~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~~ 327 (345)
T KOG2234|consen 251 SIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPARD 327 (345)
T ss_pred HHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999777654
No 2
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=100.00 E-value=1.3e-37 Score=276.18 Aligned_cols=227 Identities=40% Similarity=0.684 Sum_probs=202.7
Q ss_pred cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
....+|+..++++||++|+++|++.|.+++++|++++|++.|+++++||++++++||||++++||.++.+.++|+.+++.
T Consensus 10 ~~~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~ 89 (244)
T PF04142_consen 10 VWKSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQL 89 (244)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeec
Confidence 33457788889999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCccccC--------cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhccc
Q 019845 145 KGCGEALCD--------SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFR 216 (335)
Q Consensus 145 ~~~~~~~~~--------~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (335)
++....+.+ .....+..|.++++++++++|+++||.||++|+++.++|.||+|++.+|++++++.....|+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~ 169 (244)
T PF04142_consen 90 SSSQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGS 169 (244)
T ss_pred CCccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 664431110 012345789999999999999999999999999888999999999999999999887666665
Q ss_pred ccccCCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Q 019845 217 GGFEKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 296 (335)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lV 296 (335)
...++| +++|+++++|..++.++++|+++++++||+|++.|.+++.++++++.++++++||.+++..+++|+.+|
T Consensus 170 ~~~~~g-----~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 170 AISESG-----FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred ccccCC-----chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 544443 789999999999999999999999999999999999999999999999999999999999999998764
No 3
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.4e-26 Score=212.68 Aligned_cols=231 Identities=19% Similarity=0.209 Sum_probs=183.8
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCc
Q 019845 70 RSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGE 149 (335)
Q Consensus 70 ~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~ 149 (335)
++..+|.+.|+++..+|.+...|++|++.+..+++.++.+++++++++++||||+++.|+.|+++.++|+.++...|...
T Consensus 77 ~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~ 156 (334)
T PF06027_consen 77 RPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLS 156 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccc
Confidence 33446888899999999999999999999999999999999999999999999999999999999999999887766433
Q ss_pred cccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Q 019845 150 ALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLF 229 (335)
Q Consensus 150 ~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (335)
++.+...+++..|++++++++.++|+++|++|+..|+++ ......++.+++.+++.+.....|..+. ++ +
T Consensus 157 ~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~--~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~-------~ 226 (334)
T PF06027_consen 157 GSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP--RVEFLGMLGLFGFIISGIQLAILERSGI-ES-------I 226 (334)
T ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC--HHHHHHHHHHHHHHHHHHHHHheehhhh-hc-------c
Confidence 222222356789999999999999999999999998763 3344567788888888876655454322 11 1
Q ss_pred ccchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845 230 DGYNITTWMVV----FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 305 (335)
Q Consensus 230 ~~~~~~~~~~i----~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~ 305 (335)
.|+...+... +...+...++..++++.++...+....++.+++.++++++||+++++..++|.++|+.|..+|+.
T Consensus 227 -~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 227 -HWTSQVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNL 305 (334)
T ss_pred -CCChhhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEc
Confidence 1232222221 12223445667888999998888888889999999999999999999999999999999999998
Q ss_pred CCCCCC
Q 019845 306 PPGMLV 311 (335)
Q Consensus 306 ~~~~~~ 311 (335)
.+++..
T Consensus 306 ~~~~~~ 311 (334)
T PF06027_consen 306 AESPEE 311 (334)
T ss_pred cCCccc
Confidence 766543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=2e-24 Score=202.19 Aligned_cols=294 Identities=11% Similarity=0.081 Sum_probs=203.3
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l 81 (335)
|-|..+++.=+......++.|.+-+.|- ++....+.|..+..++..++.+..++... ..+.+|+++..+.+.+++
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~G~---~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~--~~~~~~~~~~~l~l~g~~ 87 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSKGL---NIYPFLGYSYLLASLLLLPSLFFTNRSRS--LPPLSVSILSKIGLLGFL 87 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHCCC---CccHHHHHHHHHHHHHHHHHHHHHHHhcc--cCcchHHHHHHHHHHHHH
Confidence 5678888888888888999999964443 44456788877776655544432222111 122346666666777777
Q ss_pred HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHH------hcccccHHHHHHHHHHHHHHhhhcccCCCcc-----
Q 019845 82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLF------LRRRLSTLQWMAIVLLAVGTTTSQVKGCGEA----- 150 (335)
Q Consensus 82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~------l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~----- 150 (335)
.+.++.+.++|++|++++.++++.++.|++++++++++ +|||++++||+|++++++|+.++..++....
T Consensus 88 g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~ 167 (358)
T PLN00411 88 GSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASS 167 (358)
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 66778899999999999999999999999999999999 6999999999999999999998765322100
Q ss_pred -------cc---C-cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHH-HHHHHHHHHHhhhccccc
Q 019845 151 -------LC---D-SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYT-FGAIFNMFRLLLDDFRGG 218 (335)
Q Consensus 151 -------~~---~-~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 218 (335)
+. + ....+...|+++++++++++|++.+..+|..+++++.. ..+.+... .+.++..+.....+. +.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~-~~t~~~~~~~~~~~~~~~l~~~~~-~~ 245 (358)
T PLN00411 168 PPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAF-TVSFLYTVCVSIVTSMIGLVVEKN-NP 245 (358)
T ss_pred cccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHh-HHHHHHHHHHHHHHHHHHHHHccC-Cc
Confidence 00 0 01112245999999999999999999999887764322 22222222 333333332322111 00
Q ss_pred ccCCcccccccccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHH
Q 019845 219 FEKGPWWQRLFDGYNITTWMVVFNLG----STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGII 294 (335)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~i~~~a----i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~ 294 (335)
. . ....++...+ .+++.+ ++..+..+.+++.++...+...++.|++++++|++++||++++.+++|++
T Consensus 246 -~--~----~~~~~~~~~~-~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~ 317 (358)
T PLN00411 246 -S--V----WIIHFDITLI-TIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI 317 (358)
T ss_pred -c--c----ceeccchHHH-HHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 0 0 0112222222 222223 34445566888999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCCC
Q 019845 295 ICMMSLHMYFAPPGML 310 (335)
Q Consensus 295 lVi~gv~ly~~~~~~~ 310 (335)
+|+.|+++.++.++|+
T Consensus 318 LIl~Gv~l~~~~~~~~ 333 (358)
T PLN00411 318 LITLGFYAVMWGKANE 333 (358)
T ss_pred HHHHHHHHHHhhhhhh
Confidence 9999999987654443
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.93 E-value=2.3e-23 Score=192.07 Aligned_cols=264 Identities=20% Similarity=0.283 Sum_probs=199.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHH
Q 019845 34 YATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTG 113 (335)
Q Consensus 34 ~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~a 113 (335)
+....+++.+...+.+.......++ . ++.+ +....+.+.++++.+++.+.+.+++|+|.++++++++++|++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm 105 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKF--P-KSRK---IPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVM 105 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccc--c-CCCc---ChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence 4446777777777766555443331 1 1122 22334678899999999999999999999999999999999999
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccc-ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchH
Q 019845 114 ILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLF-AAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLY 192 (335)
Q Consensus 114 lls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~-~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~ 192 (335)
+++++++|||++++||.++++.++|+.+....+..+++.++.. .....|+++++++.+++|+.++++||..++++.+.+
T Consensus 106 i~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~ 185 (303)
T PF08449_consen 106 ILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYGKSPW 185 (303)
T ss_pred HHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHH
Confidence 9999999999999999999999999999987664432211111 112349999999999999999999999998877766
Q ss_pred HHHHHHHHHHHHHHHHHHhh---hcccccccCCcccccccccchHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019845 193 WQNVQLYTFGAIFNMFRLLL---DDFRGGFEKGPWWQRLFDGYNITTWM---VVFNLGSTGLLVSWLMKYADNIIKVYST 266 (335)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~ai~g~~~~~~lk~~~a~~~~~~~ 266 (335)
........++.++..+.... .+..+. .++...++...+. ..+..+++...+.+.++..++...+..+
T Consensus 186 ~~mfy~n~~~~~~~~~~~~~l~~~~~~~~-------~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~al~~t~v~ 258 (303)
T PF08449_consen 186 ELMFYTNLFSLPFLLILLFLLPTGEFRSA-------IRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFSALTTTIVT 258 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHhhHH-------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhHH
Confidence 66666777788877665543 122111 1122223222111 1234456667777888999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCC
Q 019845 267 SMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 310 (335)
Q Consensus 267 ~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~ 310 (335)
.++.++++++|+++|||++++.+|+|.++++.|+.+|+.+++|+
T Consensus 259 t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 259 TLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999887665
No 6
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.93 E-value=4e-23 Score=189.53 Aligned_cols=272 Identities=11% Similarity=0.058 Sum_probs=193.7
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-H
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-Y 82 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~ 82 (335)
.+.+++.++.|+++.+++|... ++.++.+.++.|.....++..++..+++++ . + .+++|++ ..+.+.+ .
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~----~~~~p~~~~~~R~~~a~l~ll~~~~~~~~~-~-~-~~~~~~~---~~~~g~~~~ 79 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGV----ESWPPLMMAGVRFLIAGILLLAFLLLRGHP-L-P-TLRQWLN---AALIGLLLL 79 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHHHHhCCC-C-C-cHHHHHH---HHHHHHHHH
Confidence 4568889999999999999886 457889999999998876655444433221 1 1 1222332 3444544 3
Q ss_pred HHHhHHHHHHH-hcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845 83 LVHNNVQFATL-TYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ 161 (335)
Q Consensus 83 ~~~~~l~f~al-~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~ 161 (335)
..++.+.+++. +++|++.++++.++.|+++++++.+ +|||++++||.|+.++++|+.++..++.. +....
T Consensus 80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~--------~~~~~ 150 (292)
T PRK11272 80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL--------SGNPW 150 (292)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc--------ccchH
Confidence 56788889999 9999999999999999999999985 79999999999999999999988543211 12246
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHH
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 241 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 241 (335)
|+++.+++++++|+++++.||..+++ +......++. .+.+...+.....+.. . ....+...|..+.
T Consensus 151 G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~i~ 216 (292)
T PRK11272 151 GAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEML-AAGVVLLIASLLSGER-L----------TALPTLSGFLALG 216 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHH-HHHHHHHHHHHHcCCc-c----------cccCCHHHHHHHH
Confidence 99999999999999999999865432 3333333333 3333333322221110 0 0011222233333
Q ss_pred H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845 242 N-----LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 308 (335)
Q Consensus 242 ~-----~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~ 308 (335)
+ .+++.....+.+|+.++...+...+++|+++.+++++++||++|+.+++|+++++.|+++.+..++
T Consensus 217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 334445566777899999999999999999999999999999999999999999999988766544
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.93 E-value=2.5e-23 Score=191.27 Aligned_cols=275 Identities=11% Similarity=0.084 Sum_probs=188.7
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l 81 (335)
|-++..++..+.|+.+.+..|.. +++++.+.++.|.+++.++...+...+++.....+..+++++.......++.
T Consensus 8 ~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (296)
T PRK15430 8 QGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVL 82 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHH
Confidence 34667888889999999999986 2378899999999998765544433222110000011134444334455667
Q ss_pred HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845 82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ 161 (335)
Q Consensus 82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~ 161 (335)
...++.++|+|++++|+++++++.++.|+++++++++++|||++++||.+++++++|+.++..++. +..
T Consensus 83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~---------~~~-- 151 (296)
T PRK15430 83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG---------SLP-- 151 (296)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC---------Ccc--
Confidence 888999999999999999999999999999999999999999999999999999999998864321 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHH--
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV-- 239 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (335)
.+.+++++++|++.++.||..+++.......+.+....+.+.... ..+... .. ..........+..
T Consensus 152 --~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~-----~~~~~~~~~~~~~~~ 219 (296)
T PRK15430 152 --IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSST--SH-----MGQNPMSLNLLLIAA 219 (296)
T ss_pred --HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCCc--cc-----ccCCcHHHHHHHHHH
Confidence 357788999999999888864322112222222222222222111 111100 00 0001111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845 240 VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 304 (335)
Q Consensus 240 i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~ 304 (335)
.+..+++..+..+.+|+.++...+...+++|+++.++|++++||++++.+++|+++|+.|+.+..
T Consensus 220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 12344566777888999999999999999999999999999999999999999999988765543
No 8
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.93 E-value=1.7e-22 Score=186.00 Aligned_cols=279 Identities=11% Similarity=0.051 Sum_probs=188.3
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l 81 (335)
+..+..++..+.|+++.+++|..- ++.++.+..++|..+..+...++. +.++ . +++... ..+++
T Consensus 4 ~~~l~~l~~~~~Wg~~~~~~k~~~----~~~~p~~~~~~R~~~a~~~l~~~~-~~~~------~--~~~~~~---~~g~~ 67 (299)
T PRK11453 4 KDGVLALLVVVVWGLNFVVIKVGL----HNMPPLMLAGLRFMLVAFPAIFFV-ARPK------V--PLNLLL---GYGLT 67 (299)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHH----hcCCHHHHHHHHHHHHHHHHHHHh-cCCC------C--chHHHH---HHHHH
Confidence 345667888999999999999886 458899999999887544332222 1111 1 123221 22332
Q ss_pred -HHHHhHHHHHHHhc-CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccc
Q 019845 82 -YLVHNNVQFATLTY-VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAP 159 (335)
Q Consensus 82 -~~~~~~l~f~al~~-~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~ 159 (335)
...+..+.|.+++| .|++.+.++.++.|+++++++++++|||++++||.+++++++|+.++..++.+. .+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~------~~~~ 141 (299)
T PRK11453 68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG------QHVA 141 (299)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC------cchh
Confidence 34555677889998 688999999999999999999999999999999999999999999887543221 1123
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHH
Q 019845 160 IQGYLLGVLSACLSALAGVYTEFLMKKNNDS-LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM 238 (335)
Q Consensus 160 ~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (335)
..|+.+.+++++++|++.++.||..++++.. ......+....+.+.........+...... .....++...|.
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 215 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI------HSLVTIDMTTIL 215 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh------hhhccCCHHHHH
Confidence 4699999999999999999999976554322 111112222222221111111112110000 001122333444
Q ss_pred HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845 239 VVFNLGSTG-----LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 308 (335)
Q Consensus 239 ~i~~~ai~g-----~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~ 308 (335)
.+++.++.+ .+....+++.++...+...+++|+++.++|++++||++++.+++|+++|+.|+++...+++
T Consensus 216 ~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 216 SLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 444444443 3444556778888888999999999999999999999999999999999999987655443
No 9
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.92 E-value=1.3e-22 Score=187.10 Aligned_cols=279 Identities=11% Similarity=0.125 Sum_probs=183.6
Q ss_pred HhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHH
Q 019845 13 LTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFAT 92 (335)
Q Consensus 13 ~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~a 92 (335)
.+....+..|+.-++ .+ .+....+.+.....+.+... ++.+.+ + +.+.++++.......|++.+.++.+.+++
T Consensus 13 ~~~~~~~~NK~~l~~--~~-~P~~~~~~~~~~~~~~~~~~-~~~~~~-~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (302)
T TIGR00817 13 LNVYFNIYNKKLLNV--FP-YPYFKTLISLAVGSLYCLLS-WSSGLP-K--RLKISSALLKLLLPVAIVHTIGHVTSNVS 85 (302)
T ss_pred HHHHHHHHHHHHHhh--CC-hhHHHHHHHHHHHHHHHHHH-HHhCCC-C--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445566776532 12 23445566666654443332 322211 1 11122444445667788888899999999
Q ss_pred HhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHH
Q 019845 93 LTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACL 172 (335)
Q Consensus 93 l~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~ 172 (335)
++|++++.+++++++.|+++++++++++|||+++++|.+++++++|+.+....+ . +....|+++.++++++
T Consensus 86 l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-~--------~~~~~G~~~~l~a~~~ 156 (302)
T TIGR00817 86 LSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-L--------SFNWAGFLSAMISNIT 156 (302)
T ss_pred HHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-c--------cccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764211 1 1235699999999999
Q ss_pred HHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccch-HHHHHHHHHHHHH-----
Q 019845 173 SALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYN-ITTWMVVFNLGST----- 246 (335)
Q Consensus 173 ~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ai~----- 246 (335)
+|++.++.||..++++.+......+....+.++.++.....+......+. + .......+ ...+...+..+++
T Consensus 157 ~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (302)
T TIGR00817 157 FVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHG-F-MQAISGVNVTKIYTVSLVAAMGFFHFY 234 (302)
T ss_pred HHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHH-H-HHhhcccCchHHHHHHHHHHHHHHHHH
Confidence 99999999998773222222233343445555555544332211100000 0 00000011 1122212112211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCC
Q 019845 247 GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 309 (335)
Q Consensus 247 g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~ 309 (335)
+......+++.++.+.+....++|++++++|++++||++++.+++|+++++.|+++|++.+.|
T Consensus 235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 112224688999999999999999999999999999999999999999999999999876443
No 10
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.91 E-value=1.1e-22 Score=176.32 Aligned_cols=302 Identities=17% Similarity=0.217 Sum_probs=210.3
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhc---CC----CcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCC---C----ccccch
Q 019845 4 YFVATLLTILTSSQGILTTLSQS---NG----GYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS---P----KMTTEW 69 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~---~~----~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~---~----~~~~~~ 69 (335)
.++-++++..++.+.+..||+++ +| ++++-++..+|+.|+.|+.+...+-.|..+.... + +.+.+.
T Consensus 5 v~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf 84 (372)
T KOG3912|consen 5 VFLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPF 84 (372)
T ss_pred hhhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCC
Confidence 35567788899999999999963 11 3566778899999999998765444443322111 1 111233
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCc
Q 019845 70 RSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGE 149 (335)
Q Consensus 70 ~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~ 149 (335)
+.. .+..|++++...+.+.|.|+.+++++.+|+++...++|+++++..+||++++.+||+++....+|++++...+...
T Consensus 85 ~p~-lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~ 163 (372)
T KOG3912|consen 85 NPV-LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHL 163 (372)
T ss_pred Ccc-eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccc
Confidence 443 3566999999999999999999999999999999999999999999999999999999999999999997764321
Q ss_pred ccc-CcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhh----cccc--cccCC
Q 019845 150 ALC-DSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD----DFRG--GFEKG 222 (335)
Q Consensus 150 ~~~-~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~ 222 (335)
.+. -...++.+.|+++++.+.+.-|.+.++.||.+|+++.++....-+-..+|.++.-...... ..+. ...+|
T Consensus 164 ~~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g 243 (372)
T KOG3912|consen 164 VTDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRG 243 (372)
T ss_pred ccCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCc
Confidence 110 0112456789999999999999999999999998876444434444666744332222111 1000 00111
Q ss_pred cc--cccc---cccchHHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHH
Q 019845 223 PW--WQRL---FDGYNITTW-MV--VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGII 294 (335)
Q Consensus 223 ~~--~~~~---~~~~~~~~~-~~--i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~ 294 (335)
.+ +.+. +++-+.... +. +...+..+..--.+.|+.++..+.....+++.+.++++....+|.+...|+.|.+
T Consensus 244 ~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFl 323 (372)
T KOG3912|consen 244 VLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFL 323 (372)
T ss_pred chhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH
Confidence 00 0000 001110000 00 0111112222225678999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCC
Q 019845 295 ICMMSLHMYFAP 306 (335)
Q Consensus 295 lVi~gv~ly~~~ 306 (335)
+.+.|+.+||..
T Consensus 324 iLi~Gi~lY~~i 335 (372)
T KOG3912|consen 324 ILIMGIILYNQI 335 (372)
T ss_pred HHHHHHHHHHHH
Confidence 999999999854
No 11
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.91 E-value=6.3e-22 Score=181.87 Aligned_cols=274 Identities=10% Similarity=0.052 Sum_probs=189.5
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l 81 (335)
|.|++.++.++.|+++.+.+|..- +.+++....++|..+..++..++. .++ +.++.+++. ....++.
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~----~~~~P~~~~~~R~~~a~l~l~~~~--~~~-----~~~~~~~~~--~~~~~l~ 70 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVS----ESLGPVGGAAMIYSVSGLLLLLTV--GFP-----RLRQFPKRY--LLAGGLL 70 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHH----ccCChHHHHHHHHHHHHHHHHHHc--ccc-----ccccccHHH--HHHHhHH
Confidence 567889999999999999999986 558889899999777655433221 111 111112221 2233445
Q ss_pred HHHHhHHHHHHHhc----CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccC--cc
Q 019845 82 YLVHNNVQFATLTY----VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCD--SL 155 (335)
Q Consensus 82 ~~~~~~l~f~al~~----~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~--~~ 155 (335)
++.++.+.|.++++ ++++...++.++.|+++++++++++|||++++||.+++++++|+.++..++.+.+..+ .+
T Consensus 71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 150 (295)
T PRK11689 71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN 150 (295)
T ss_pred HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence 66777888887754 6788889999999999999999999999999999999999999998875542111000 00
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHH
Q 019845 156 FAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT 235 (335)
Q Consensus 156 ~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (335)
......|+++++++++++|+++++.||..++++ +. . ......+. +..+.....+ ... ...+..
T Consensus 151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~-~--~~~~~~~~-~l~~~~~~~~-~~~-----------~~~~~~ 213 (295)
T PRK11689 151 IASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GI-T--LFFILTAL-ALWIKYFLSP-QPA-----------MVFSLP 213 (295)
T ss_pred cccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-ch-h--HHHHHHHH-HHHHHHHHhc-Ccc-----------ccCCHH
Confidence 112346999999999999999999999765543 22 1 11112222 2222222211 100 011222
Q ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845 236 TWMVVF----NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 305 (335)
Q Consensus 236 ~~~~i~----~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~ 305 (335)
.|..+. ..+++..+..+.+|+.++...+...+++|+++.+++++++||++++.+++|+++|+.|+++...
T Consensus 214 ~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 214 AIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 232222 2333455566788999999999999999999999999999999999999999999999866544
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.91 E-value=1.4e-21 Score=176.13 Aligned_cols=257 Identities=16% Similarity=0.110 Sum_probs=181.2
Q ss_pred hhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHH
Q 019845 14 TSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATL 93 (335)
Q Consensus 14 ~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al 93 (335)
|+.+.+..|+.-++ ..++....+.|.+...++..+...++ + .+++|+. .....++...+++.+.|.|+
T Consensus 1 Wg~~~~~~k~~~~~---~~~~~~~~~~r~~~~~l~l~~~~~~~-~------~~~~~~~--~~~~~~~~~~l~~~~~~~a~ 68 (260)
T TIGR00950 1 WGTTGVVIGQYLEG---QVPLYFAVFRRLIFALLLLLPLLRRR-P------PLKRLLR--LLLLGALQIGVFYVLYFVAV 68 (260)
T ss_pred CcchHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHhc-c------CHhHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 57788899997522 34667677777776655544333222 1 1112222 22333445678999999999
Q ss_pred hcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHH
Q 019845 94 TYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLS 173 (335)
Q Consensus 94 ~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~ 173 (335)
+|+|+++..++.++.|+++++++.+++|||++++||.++.++++|+.++..++.. +....|+.+.+++++++
T Consensus 69 ~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~--------~~~~~G~~~~l~a~~~~ 140 (260)
T TIGR00950 69 KRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL--------SINPAGLLLGLGSGISF 140 (260)
T ss_pred HhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcc--------cccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988654321 12357999999999999
Q ss_pred HHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH--HHHHHHHHHHHHHHHHH
Q 019845 174 ALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFNLGSTGLLVS 251 (335)
Q Consensus 174 a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~ai~g~~~~ 251 (335)
+..+++.||..++.+.+....+.+.+..+.++..+.....+ +. . ..+..++ ..+..++...++..+..
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLG-PN---P------QALSLQWGALLYLGLIGTALAYFLWN 210 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcC-CC---C------CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987665432222222233445544444332211 10 0 0111111 11122233345556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHh
Q 019845 252 WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300 (335)
Q Consensus 252 ~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv 300 (335)
+.+|+.++...+...+++|+++.+++++++||+++..+++|..+++.|+
T Consensus 211 ~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 211 KGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 7889999999999999999999999999999999999999999999886
No 13
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.90 E-value=3.8e-21 Score=180.46 Aligned_cols=280 Identities=14% Similarity=0.170 Sum_probs=187.8
Q ss_pred HHhhhhHHhhHhhhcCCCccee-hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHH
Q 019845 12 ILTSSQGILTTLSQSNGGYKYD-YATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQF 90 (335)
Q Consensus 12 l~~~~~~i~~k~~~~~~~~~~~-~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f 90 (335)
..+....+..|+.-+ .++ |.+...+|.+++.+++..+ +..+.+ +.++.....++.......|+++...+...+
T Consensus 59 ~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~-~~~~~~-~~~~~~~~~~~~~~llp~gl~~~~~~~~~~ 132 (350)
T PTZ00343 59 ALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLY-WATGFR-KIPRIKSLKLFLKNFLPQGLCHLFVHFGAV 132 (350)
T ss_pred HHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHH-HHhCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555666642 245 6778888888876655433 222111 112221111233345566888777777788
Q ss_pred HHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHH
Q 019845 91 ATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSA 170 (335)
Q Consensus 91 ~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aa 170 (335)
.|+++.+++.+++++++.|+++++++++++|||++++++.++++.++|+.+....+. +....|++++++++
T Consensus 133 ~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~---------~~~~~G~~~~l~s~ 203 (350)
T PTZ00343 133 ISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL---------HFTWLAFWCAMLSN 203 (350)
T ss_pred HHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc---------hhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999864221 12357999999999
Q ss_pred HHHHHHHHHHHHHhhcCCC---chHHHHHHH--HHHHHHHHHHHHhhhcccccccCCcccccccccchH-HHHHHHHHHH
Q 019845 171 CLSALAGVYTEFLMKKNND---SLYWQNVQL--YTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI-TTWMVVFNLG 244 (335)
Q Consensus 171 l~~a~~~v~~~k~~k~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~a 244 (335)
+++|+.+++.||.+++.+. +....+.+. ...+.++.++.....|.................+.. ..+..++..+
T Consensus 204 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s~ 283 (350)
T PTZ00343 204 LGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFSG 283 (350)
T ss_pred HHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHHH
Confidence 9999999999998876431 111122222 345666665554433321100000000000111111 1111222334
Q ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 245 STGLLVS----WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 245 i~g~~~~----~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
+.+.+.. +++++.++...+...+++++++.++|++++||++++.+++|.++++.|+++|+..
T Consensus 284 l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 284 VWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 4444444 4788899999999999999999999999999999999999999999999999864
No 14
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.90 E-value=1.1e-20 Score=173.49 Aligned_cols=271 Identities=10% Similarity=-0.071 Sum_probs=189.2
Q ss_pred hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845 3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY 82 (335)
Q Consensus 3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~ 82 (335)
-+..+++..+.++.+..++|+.- +++++.+.++.|.++..++...+..+.++ . ..+++|+ .....++++
T Consensus 13 ~~~~~~la~~~~~~~~~~~K~~~----~~~~~~~~~~~R~~~a~l~l~~~~~~~~~--~--~~~~~~~---~~~~~g~~~ 81 (293)
T PRK10532 13 PILLLLIAMASIQSGASLAKSLF----PLVGAPGVTALRLALGTLILIAIFKPWRL--R--FAKEQRL---PLLFYGVSL 81 (293)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHH----HHcCHHHHHHHHHHHHHHHHHHHHhHHhc--c--CCHHHHH---HHHHHHHHH
Confidence 46788899999999999999986 35888889999999987665444322211 1 1122233 244566778
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhH
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQG 162 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G 162 (335)
...+.+.|++++|+|++.+.++.++.|+++++++. ||.++. .++.++++|+.++..++.+.+ +.+..|
T Consensus 82 ~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~~--~~~~i~~~Gv~li~~~~~~~~------~~~~~G 149 (293)
T PRK10532 82 GGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVDF--VWVVLAVLGLWFLLPLGQDVS------HVDLTG 149 (293)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHHH--HHHHHHHHHHheeeecCCCcc------cCChHH
Confidence 88899999999999999999999999999998873 555544 456678999988764432211 123469
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccc--chHHHHHHH
Q 019845 163 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDG--YNITTWMVV 240 (335)
Q Consensus 163 ~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i 240 (335)
+++.+++++++|++.+..||..++++ +. ....+ ...+.+...+.....+. .. ..+. +....++.+
T Consensus 150 ~ll~l~aa~~~a~~~v~~r~~~~~~~-~~-~~~~~-~~~~~~~l~~~~~~~~~-~~---------~~~~~~~~~~l~lgv 216 (293)
T PRK10532 150 AALALGAGACWAIYILSGQRAGAEHG-PA-TVAIG-SLIAALIFVPIGALQAG-EA---------LWHWSILPLGLAVAI 216 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-ch-HHHHH-HHHHHHHHHHHHHHccC-cc---------cCCHHHHHHHHHHHH
Confidence 99999999999999999999866543 32 22232 23344333333222111 00 0011 111123333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCC
Q 019845 241 FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 309 (335)
Q Consensus 241 ~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~ 309 (335)
+...++..+..+.+++.++...+...+++|+++.++|++++||++++.+++|+++|+.|+..+....+|
T Consensus 217 ~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 217 LSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 444445556678889999999999999999999999999999999999999999999998887655443
No 15
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.88 E-value=2.7e-21 Score=170.42 Aligned_cols=221 Identities=27% Similarity=0.413 Sum_probs=185.4
Q ss_pred hhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCc
Q 019845 75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDS 154 (335)
Q Consensus 75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~ 154 (335)
..+|+..|+.+|.+.+.++.+.++...+.. +.+.+.++++....++++++..||.++.....|+..++.++..++. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~--~ 78 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT--L 78 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc--c
Confidence 467899999999999999999999999999 9999999999999999999999999999999999988754432110 1
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH
Q 019845 155 LFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI 234 (335)
Q Consensus 155 ~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (335)
..++...|..+.+.+++++++.++|+||..|+++...+.++++++.++.+.+.......+...... .+++.+++.
T Consensus 79 ~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 153 (222)
T TIGR00803 79 MFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISN-----FGFFIGYPT 153 (222)
T ss_pred ccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhc-----cCcccCCch
Confidence 113446788888888889999999999988876667899999999988887655443332221111 134667888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 235 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 235 ~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
..|..++.++++|.++++++|+.|++.+++...++++++.++|+++|||+++..+++|+.+|+.|+++|
T Consensus 154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 888888889999999999999999999999999999999999999999999999999999999999886
No 16
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.3e-20 Score=165.68 Aligned_cols=270 Identities=14% Similarity=0.157 Sum_probs=209.6
Q ss_pred CCcceehhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhh
Q 019845 28 GGYKYDYAT-VPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGN 106 (335)
Q Consensus 28 ~~~~~~~~~-~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~ 106 (335)
.++||...+ .+|++.+.+++.+..++... ++ . .+.+..|. .|...++...+...++|.||+|++-++..+.++
T Consensus 44 ~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~-k~-~-~~~~apl~---~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKs 117 (327)
T KOG1581|consen 44 DGERFEHSLFLVFCQRLVALLVSYAMLKWW-KK-E-LSGVAPLY---KYSLISFTNTLSSWCGYEALKYVSYPTQTLAKS 117 (327)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhcc-cc-c-CCCCCchh---HHhHHHHHhhcchHHHHHHHHhccchHHHHHHH
Confidence 456776666 77889999998885554222 21 1 22222333 467778999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019845 107 LKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 186 (335)
Q Consensus 107 ~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~ 186 (335)
++.+.++++..++.|+|++.+++++..+...||.+....+.+++..++...+...|+.++...-++.|+.+..++++.|+
T Consensus 118 cKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~ 197 (327)
T KOG1581|consen 118 CKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK 197 (327)
T ss_pred hhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc
Confidence 99999999999999999999999999999999999876544432222222356789999999999999999999999998
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 019845 187 NNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMV---VFNLGSTGLLVSWLMKYADNIIKV 263 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~ai~g~~~~~~lk~~~a~~~~ 263 (335)
.+.+.+.....+.+++++.+....+..+ .. .+ ...|...++...+-+ -.+.++|+.++.+.++..++++-.
T Consensus 198 ~k~s~~~mM~~vNLf~~i~~~~~li~qg-~~--~~---av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t 271 (327)
T KOG1581|consen 198 YKVSSLHMMFGVNLFSAILNGTYLILQG-HL--LP---AVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFT 271 (327)
T ss_pred CCccHhHHHHHHHHHHHHHHHHhhhcCC-CC--ch---HHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHH
Confidence 8777777777778889998888754321 11 00 123444444333332 245678889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCC
Q 019845 264 YSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGM 309 (335)
Q Consensus 264 ~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~ 309 (335)
..+.++.+++.++|.++||+++++.||+|..+|+.|+++-...+++
T Consensus 272 ~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 272 TIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998765544433
No 17
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.85 E-value=5.3e-19 Score=161.37 Aligned_cols=272 Identities=14% Similarity=0.136 Sum_probs=171.0
Q ss_pred HHHHHHHHHHhhhhHHhhH-hhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845 4 YFVATLLTILTSSQGILTT-LSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY 82 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k-~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~ 82 (335)
.++-++..+.++..-+.+| ..+++ +..+ +.......+...+....+..+...+..+++++ ......++..
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~-----~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 73 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE-----PDFL--WWALLAHSVLLTPYGLWYLAQVGWSRLPATFW--LLLAISAVAN 73 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch-----hHHH--HHHHHHHHHHHHHHHHHhcccCCCCCcchhhH--HHHHHHHHHH
Confidence 3566778888889989998 44321 1122 22222222222222222111111111111222 2234556678
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhH
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQG 162 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G 162 (335)
..++.+.+.|+++.|++..+.+.++.|+++++++++++|||++++||.|+.+++.|+.++..++..+ ....|
T Consensus 74 ~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~--------~~~~g 145 (281)
T TIGR03340 74 MVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ--------HRRKA 145 (281)
T ss_pred HHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc--------cchhH
Confidence 8999999999999999999999999999999999999999999999999999999999886543211 11347
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCC--chHHH-HHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHH--HH
Q 019845 163 YLLGVLSACLSALAGVYTEFLMKKNND--SLYWQ-NVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT--TW 237 (335)
Q Consensus 163 ~~l~l~aal~~a~~~v~~~k~~k~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 237 (335)
+.++++++++++++.++.||..++.++ +.... .......+.++..... ..+.... ........ .+
T Consensus 146 ~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---------~~~~~~~~~~~~ 215 (281)
T TIGR03340 146 YAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYL-KRHGRSM---------FPYARQILPSAT 215 (281)
T ss_pred HHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHH-HHhccch---------hhhHHHHHHHHH
Confidence 778899999999999887775433221 11111 1111111122211111 1111100 00011111 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845 238 MVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 302 (335)
Q Consensus 238 ~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l 302 (335)
...+..+++..+..+.+++.++...+...+++|+++.++|++++||+++..+++|+++|+.|+.+
T Consensus 216 ~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 216 LGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 22233344555566777888887777888899999999999999999999999999999999865
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.83 E-value=3.1e-17 Score=149.37 Aligned_cols=280 Identities=19% Similarity=0.195 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845 3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY 82 (335)
Q Consensus 3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~ 82 (335)
.+...++..+.++......|....+ ..+.....+.|.............+++. ...+....+ .......++..
T Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~ 80 (292)
T COG0697 8 GLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLLLPLLLLEPR--GLRPALRPW--LLLLLLALLGL 80 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHHHHHHHhhcc--cccccccch--HHHHHHHHHHH
Confidence 3455667778888888888887633 2444545555666665552112222210 011111111 11234556667
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHH-HHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFR-LFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ 161 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~-~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~ 161 (335)
...+.+++.++++++++.++++.++.|++++++++ +++|||+++++|.++.+++.|+.++..++..+.. . ...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-----~-~~~ 154 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-----L-SLL 154 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----H-HHH
Confidence 88999999999999999999999999999999997 7779999999999999999999999876654310 1 357
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHH
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 241 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 241 (335)
|+.+.+++++++|++.++.|+.. +.+ +........ ..+...........+.. .. .....+....+..++
T Consensus 155 g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~g~~ 223 (292)
T COG0697 155 GLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQ-LLLALLLLLLFFLSGFG---AP-----ILSRAWLLLLYLGVF 223 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHH-HHHHHHHHHHHHhcccc---cc-----CCHHHHHHHHHHHHH
Confidence 99999999999999999999887 332 211111011 11111111111111110 00 000111112222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 242 ~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
..+++..+..+.+++.++...+...+++++++.+++++++||+++..+++|.++++.|+.+.+.+
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 33345566667788888888888889999999999999999999999999999999999888766
No 19
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.83 E-value=5e-18 Score=152.84 Aligned_cols=249 Identities=12% Similarity=0.064 Sum_probs=166.3
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCC-CCccc-cchhh-hhhhhHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPS-SPKMT-TEWRS-VRLFPIP 78 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~-~~~~~-~~~~~-~~~~~i~ 78 (335)
|.+++.++..+.|+.+.++.|... ..++.+.++.|.+++..+..++....+++.+ .++.+ .++++ .....+.
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~~-----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLLK-----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence 567889999999999999999842 2788999999999877654333322211100 01111 11122 2235667
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA 158 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~ 158 (335)
+++...++.++++|++++|+++++++.++.|+++++++++++|||++++||.+++++++|+.++..++ ++ .
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~-~~--------~ 147 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLK-GS--------L 147 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHc-CC--------c
Confidence 77888999999999999999999999999999999999999999999999999999999999875432 11 1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHH
Q 019845 159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWM 238 (335)
Q Consensus 159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (335)
. .+++++++++|.+.+..||..+++ .. +.........++........++... . .......+.++
T Consensus 148 ~----~~~l~aa~~~a~~~i~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~l 211 (256)
T TIGR00688 148 P----WEALVLAFSFTAYGLIRKALKNTD-LA---GFCLETLSLMPVAIYYLLQTDFATV-Q-------QTNPFPIWLLL 211 (256)
T ss_pred h----HHHHHHHHHHHHHHHHHhhcCCCC-cc---hHHHHHHHHHHHHHHHHHHhccCcc-c-------ccCchhHHHHH
Confidence 1 346788999999999988864432 11 1111011122222211111122110 0 00111111221
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 019845 239 V--VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYL 280 (335)
Q Consensus 239 ~--i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~ 280 (335)
. .+...++..+....+|+.++...+...+++|+++.++++++
T Consensus 212 ~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 212 VLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 1 12345566777888999999999999999999999999764
No 20
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.78 E-value=3.6e-18 Score=144.94 Aligned_cols=259 Identities=16% Similarity=0.154 Sum_probs=187.8
Q ss_pred CcceehhH-HHHHHHHHHHHHHHHHH-HHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhh
Q 019845 29 GYKYDYAT-VPFLAEVFKLVVSSILL-WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGN 106 (335)
Q Consensus 29 ~~~~~~~~-~v~~~e~~~l~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~ 106 (335)
+++|..+. .||+....-.+++-.++ .|++. +.++. +-..|+..++.|.+.+....-|+|+.|.++..+-++
T Consensus 47 ~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~--~~D~t-----~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKS 119 (337)
T KOG1580|consen 47 IEKFTFALALVFFQCTANTVFAKVLFLIRKKT--EIDNT-----PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKS 119 (337)
T ss_pred hheehHHHHHHHHHHHHHHHHHHhheeecccc--cccCC-----cchHHHHHHHHHHHHHHhccchhcccCCcHHHhccc
Confidence 35666554 66777766666664443 22221 11111 222477778889999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019845 107 LKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKK 186 (335)
Q Consensus 107 ~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~ 186 (335)
++|+.++++.+++.+++++|+++.++++..+||++....+...... ......+|.++.+++-...++.+..+||+.+.
T Consensus 120 cKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~--e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~ 197 (337)
T KOG1580|consen 120 CKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA--EDKTFGFGELLLILSLAMDGLTGSIQDRIRAS 197 (337)
T ss_pred CCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC--cccccchHHHHHHHHHHhcccchhHHHHHHHh
Confidence 9999999999999999999999999999999999998764322111 11234579999999999999999999998776
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhh-cccccccCCcccccccccchHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q 019845 187 NNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTWM---VVFNLGSTGLLVSWLMKYADNIIK 262 (335)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~ai~g~~~~~~lk~~~a~~~ 262 (335)
+..+-......+.+++++....+.+.. |.. + +..|...++...|- ..+...+|++++.....+.+....
T Consensus 198 yq~~g~~MM~~~NlwStL~Lg~g~lfTGElw---e----F~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtC 270 (337)
T KOG1580|consen 198 YQRTGTSMMFYTNLWSTLYLGAGLLFTGELW---E----FFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTC 270 (337)
T ss_pred hccCchhhHHHHHHHHHHHhhhhheehhhHH---H----HHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeE
Confidence 543322233445677887766655432 100 0 01122344433332 223456788888777788899999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 263 VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 263 ~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
++.+..+..++++.|+++|+++++..||+|..+|+.+...=
T Consensus 271 SivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 271 SIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred EEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 99999999999999999999999999999999999997543
No 21
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.72 E-value=5.9e-18 Score=146.22 Aligned_cols=217 Identities=11% Similarity=0.086 Sum_probs=155.1
Q ss_pred hhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCC--c--c
Q 019845 75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG--E--A 150 (335)
Q Consensus 75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~--~--~ 150 (335)
..+++++.+.+..+.|++++|++.+.+.++.++.|.+|.++++.+||||.++.+-++..+.+.||+++.+|..- + .
T Consensus 100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~ 179 (346)
T KOG4510|consen 100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTE 179 (346)
T ss_pred EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCcc
Confidence 35678888888899999999999999999999999999999999999999999999999999999999888631 1 1
Q ss_pred ccCcc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh-hhcccccccCCcccccc
Q 019845 151 LCDSL-FAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRL 228 (335)
Q Consensus 151 ~~~~~-~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 228 (335)
..+.. ......|....+.++++.|...+..|++.|+-+...-+ .+....+.+.+++... +.+++.+ +
T Consensus 180 g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msv--syf~~i~lV~s~I~~~~ig~~~lP--~------- 248 (346)
T KOG4510|consen 180 GEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSV--SYFSLITLVVSLIGCASIGAVQLP--H------- 248 (346)
T ss_pred ccccccccccCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEe--hHHHHHHHHHHHHHHhhccceecC--c-------
Confidence 11111 12335688888888888888888899988876532111 1122334444444332 1222211 0
Q ss_pred cccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 229 FDGYNITTWMVV-FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 229 ~~~~~~~~~~~i-~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
.+-+++....+ +..-++++++...++.-.+...+..++...+++.++.+++|||.||++.|+|+++|+.++...
T Consensus 249 -cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 249 -CGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred -cccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 11111111111 223356777777777666666778999999999999999999999999999999999886543
No 22
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.63 E-value=4.7e-14 Score=124.54 Aligned_cols=291 Identities=16% Similarity=0.168 Sum_probs=193.1
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCC--cceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhh-hhhHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGG--YKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVR-LFPIP 78 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~--~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~i~ 78 (335)
+|-+..+.+++.+=.-++..+++++... .+|+-. .+-...+++++++.......++.....|...+|++.. +.+..
T Consensus 12 ~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf-~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPt 90 (349)
T KOG1443|consen 12 MNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLF-VTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPT 90 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchH-HHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhh
Confidence 3556677777888888888899875433 344433 4456677888777544322212122234566787643 44555
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA 158 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~ 158 (335)
|+.-..+-.+..++++|++.+.|++.+++.++|+.+++..+-=||.++.-..-+++..+|+.+....+.+ -
T Consensus 91 alata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTq---------f 161 (349)
T KOG1443|consen 91 ALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQ---------F 161 (349)
T ss_pred hhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccc---------e
Confidence 6667788899999999999999999999999999999999888999999888899999999988765432 2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCC---chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH-
Q 019845 159 PIQGYLLGVLSACLSALAGVYTEFLMKKNND---SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI- 234 (335)
Q Consensus 159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (335)
...|..+++.+++++|+-..+.++++++++. ++.....++.-+..+..++..+..|+...... .+.+...+.
T Consensus 162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~----s~~f~~~d~~ 237 (349)
T KOG1443|consen 162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITS----SSIFRFQDTG 237 (349)
T ss_pred eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchh----hhHHHhcCcc
Confidence 3679999999999999999999999887641 12122222222333333333333343221100 111221111
Q ss_pred HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 235 TTWMVVFNLGSTGLLVSWLM--------KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 235 ~~~~~i~~~ai~g~~~~~~l--------k~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
..+.++...+++|.. ++++ ...+.++.+++.-..-+.+.+++..+.+|+++..-|+|..+++.|+..|..+
T Consensus 238 ~~~rv~g~i~l~g~l-aF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~ 316 (349)
T KOG1443|consen 238 LILRVIGLISLGGLL-AFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE 316 (349)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence 123333333444432 2222 2345555566666777888999999999999999999999999999999554
Q ss_pred C
Q 019845 307 P 307 (335)
Q Consensus 307 ~ 307 (335)
+
T Consensus 317 ~ 317 (349)
T KOG1443|consen 317 P 317 (349)
T ss_pred c
Confidence 3
No 23
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.62 E-value=6.5e-13 Score=121.67 Aligned_cols=269 Identities=14% Similarity=0.158 Sum_probs=175.8
Q ss_pred hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHH
Q 019845 3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIY 82 (335)
Q Consensus 3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~ 82 (335)
.+++.++.++.|++.++..|... + .++.+.+ +..+..++........++ ++. +.++....-.+.+++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g--~~~~~~~--~~~~g~l~~~~~~~~~~~----~~~-~~~~~~~~g~l~G~~w 69 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---G--GPYSQTL--GTTFGALILSIAIAIFVL----PEF-WALSIFLVGLLSGAFW 69 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---C--CHHHHHH--HHHHHHHHHHHHHHHHhC----Ccc-cccHHHHHHHHHHHHH
Confidence 47788899999999999999875 1 2333333 333333322222111111 111 1122222234556678
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhh-hHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHHhhhcccCCCccccCcccc
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGN-LKIVTTGILFRLFLRRRLSTLQ----WMAIVLLAVGTTTSQVKGCGEALCDSLFA 157 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~-~~pl~~alls~~~l~er~~~~q----~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~ 157 (335)
...|.+++.+.+++..+.+..+.+ ..+++.++++.+++|||.++++ +.|+++.++|+.++...+.++...++ ..
T Consensus 70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~-~~ 148 (290)
T TIGR00776 70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKS-EF 148 (290)
T ss_pred HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccc-cc
Confidence 899999999999999999999999 8999999999999999999999 99999999999988665432211000 01
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHH---HHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH
Q 019845 158 APIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYW---QNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI 234 (335)
Q Consensus 158 ~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (335)
+...|+.+.++++++++++.+..|+. + ++ +... +..-+...+++++.+. .+.+ | .. +.
T Consensus 149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~-~-~~-~~~~~~~~~~g~~~~~~~~~~~~---~~~~------~-----~~--~~ 209 (290)
T TIGR00776 149 NFKKGILLLLMSTIGYLVYVVVAKAF-G-VD-GLSVLLPQAIGMVIGGIIFNLGH---ILAK------P-----LK--KY 209 (290)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHc-C-CC-cceehhHHHHHHHHHHHHHHHHH---hccc------c-----hH--HH
Confidence 12459999999999999999988865 2 22 2222 2222222344333322 0000 0 01 11
Q ss_pred HHHHHHH---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHH----HHHHHHHHHhhhc
Q 019845 235 TTWMVVF---NLGSTGLLVSWLMK-YADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLF----LGIIICMMSLHMY 303 (335)
Q Consensus 235 ~~~~~i~---~~ai~g~~~~~~lk-~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~----~G~~lVi~gv~ly 303 (335)
..|..++ ..+++..+.....+ +.++......++.+|+.+++++++++||+.+..++ +|.++++.|+.+-
T Consensus 210 ~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 210 AILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence 1121111 12333333334446 77888888899999999999999999999999999 9999999998764
No 24
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.59 E-value=2.7e-12 Score=113.43 Aligned_cols=274 Identities=15% Similarity=0.111 Sum_probs=181.1
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l 81 (335)
|-+++.+..-+.|+..+...|+-+ +.+..++.--|-+-.+.+.+.++...++++...+..+++|.+..+.+.+++
T Consensus 7 ~Gil~~l~Ay~lwG~lp~y~kll~-----~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 7 KGILLALLAYLLWGLLPLYFKLLE-----PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 457788889999999999999995 345566666666666655544443222221212234455666666777888
Q ss_pred HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchh
Q 019845 82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQ 161 (335)
Q Consensus 82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~ 161 (335)
-..+-.++.+|.++-..-++++-.+.+|++..+++.+++|||+++.||+++++..+||..-.+..++ -|..
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~---------lpwv 152 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS---------LPWV 152 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC---------CcHH
Confidence 8888889999999999999999999999999999999999999999999999999999987664322 2332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHH
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (335)
. +.-++.+++++. .||..|-+.. ....... .-.+..+...+..+...... ..+..+.. ++.+
T Consensus 153 a----l~la~sf~~Ygl-~RK~~~v~a~~g~~lE~l----~l~p~al~yl~~l~~~~~~~-------~~~~~~~~-~LLv 215 (293)
T COG2962 153 A----LALALSFGLYGL-LRKKLKVDALTGLTLETL----LLLPVALIYLLFLADSGQFL-------QQNANSLW-LLLV 215 (293)
T ss_pred H----HHHHHHHHHHHH-HHHhcCCchHHhHHHHHH----HHhHHHHHHHHHHhcCchhh-------hcCCchHH-HHHH
Confidence 2 233455566654 5555554321 2222222 22233333332222111000 00112212 2222
Q ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 241 FNLGSTG---LLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 241 ~~~ai~g---~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
....+.. .+.+..-|+.+=...++.+|.+|.+-.+++++++||+++..+....+.+-.|+.+|..+
T Consensus 216 ~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 216 LAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred HhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2111222 22334446677777889999999999999999999999999999999999999988765
No 25
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.59 E-value=1e-14 Score=126.85 Aligned_cols=229 Identities=16% Similarity=0.227 Sum_probs=153.8
Q ss_pred hhhHHHHHHHHHhHHHHHHHhc-CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccc-
Q 019845 74 LFPIPSIIYLVHNNVQFATLTY-VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEAL- 151 (335)
Q Consensus 74 ~~~i~a~l~~~~~~l~f~al~~-~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~- 151 (335)
.|++.-.+++..|.+..+++++ +|.+...++++..++.+++++++++|+|++.+|+.++++..+|+.+.......+..
T Consensus 66 ~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 66 DYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred hhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 4666667888999999999995 89999999999999999999999999999999999999999999987654322210
Q ss_pred ----cC-----cccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHH-HHHHHHHHHHH--hhhcccccc
Q 019845 152 ----CD-----SLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY-TFGAIFNMFRL--LLDDFRGGF 219 (335)
Q Consensus 152 ----~~-----~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~ 219 (335)
.| +.......|+.+...+.+.+|..++|+|..+|+++.. |..+++.. +.+.++.++.. +..+|....
T Consensus 146 ~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~ 224 (330)
T KOG1583|consen 146 KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAF 224 (330)
T ss_pred hhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHh
Confidence 00 0111224698888999999999999999999987632 33333322 22333332221 011221111
Q ss_pred cCCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHH
Q 019845 220 EKGPWWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYA-------DNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLG 292 (335)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~i~~~ai~g~~~~~~lk~~-------~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G 292 (335)
...+...+.....-+..|..++.+.+.+. .++|.. ++...+....++..++.++|+..|.+++++..|+|
T Consensus 225 ~se~~~~p~~g~~vP~~~~yLl~n~L~Qy---~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lG 301 (330)
T KOG1583|consen 225 KSESYLIPLLGFKVPSMWVYLLFNVLTQY---FCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLG 301 (330)
T ss_pred cCcceeccccCccccHHHHHHHHHHHHHH---HHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHH
Confidence 11000011111111234444444554443 344432 23333444467889999999999999999999999
Q ss_pred HHHHHHHhhhccCC
Q 019845 293 IIICMMSLHMYFAP 306 (335)
Q Consensus 293 ~~lVi~gv~ly~~~ 306 (335)
+++|+.|..+|...
T Consensus 302 a~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 302 AALVFFGTLLFANV 315 (330)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988654
No 26
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.55 E-value=2.1e-14 Score=130.85 Aligned_cols=221 Identities=19% Similarity=0.252 Sum_probs=158.9
Q ss_pred hhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCc
Q 019845 75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDS 154 (335)
Q Consensus 75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~ 154 (335)
....|+.++++..+...++++.|.+.+|+++.+.|+++.++++++.+|+.++.-++++.....||.+....+.
T Consensus 86 llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~------- 158 (316)
T KOG1441|consen 86 LLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL------- 158 (316)
T ss_pred HHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------
Confidence 3456889999999999999999999999999999999999999999999999999999999999998876322
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHH--HHHHHHHH-HHHhhhcccccccCCccccccccc
Q 019845 155 LFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLY--TFGAIFNM-FRLLLDDFRGGFEKGPWWQRLFDG 231 (335)
Q Consensus 155 ~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (335)
+....|.+..+.+.+..++.+++.++++++++.+..-.|...+ -.+..+.+ +.....+... .. + .....
T Consensus 159 --~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~-~~-~----~~~~~ 230 (316)
T KOG1441|consen 159 --SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNK-FV-G----FLTAP 230 (316)
T ss_pred --cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccc-ee-e----eeccc
Confidence 2246799999999999999999999999643322211222212 22333333 2111111111 00 0 01112
Q ss_pred chHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845 232 YNITTWMVVFNL--G-STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 308 (335)
Q Consensus 232 ~~~~~~~~i~~~--a-i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~ 308 (335)
++...+..++.. + ..++....++.+.++++-+++..+..++..+.|+++|+|+.++.+..|+++-+.|+++|++.+.
T Consensus 231 ~~~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 231 WFVTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 222211111111 1 2244455677888888888888888888899999999999999999999999999999998765
Q ss_pred CC
Q 019845 309 ML 310 (335)
Q Consensus 309 ~~ 310 (335)
++
T Consensus 311 ~~ 312 (316)
T KOG1441|consen 311 KE 312 (316)
T ss_pred hh
Confidence 44
No 27
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.53 E-value=7.4e-13 Score=115.04 Aligned_cols=230 Identities=17% Similarity=0.174 Sum_probs=167.8
Q ss_pred cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
+..+||. |.+.+.+....+.+..-++.|++.++..+.++++.+.+.+.+.++=|+|+++..+.+..+..+|.+...+
T Consensus 102 r~iP~rt---Y~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTL 178 (367)
T KOG1582|consen 102 RVIPWRT---YVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTL 178 (367)
T ss_pred eecchhH---hhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhh
Confidence 3445664 6777888888889999999999999999999999999999999999999999999999999999999987
Q ss_pred cCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcc
Q 019845 145 KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPW 224 (335)
Q Consensus 145 ~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (335)
.|...+. +-+..|.+++-+|-++.|+-+-.+||.+|..+.+-....+.-+..|.++.+..+..... ....
T Consensus 179 ADs~~sP-----NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge--~f~a--- 248 (367)
T KOG1582|consen 179 ADSQTSP-----NFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGE--LFSA--- 248 (367)
T ss_pred cccccCC-----CcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhccc--chhh---
Confidence 6654321 22357988877888888999899999998765432221222334466665555443210 0000
Q ss_pred cccccccchHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHh
Q 019845 225 WQRLFDGYNITTWMVVFNLG----STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSL 300 (335)
Q Consensus 225 ~~~~~~~~~~~~~~~i~~~a----i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv 300 (335)
..+...+++.++...+..+ +|...+-..+|..++...+..++.+..++.++|+++|..++|....-|..+|..|+
T Consensus 249 -~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI 327 (367)
T KOG1582|consen 249 -WTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGI 327 (367)
T ss_pred -hHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHH
Confidence 0122233443443332222 23333334568888888888999999999999999999999999999999999999
Q ss_pred hhccCCCC
Q 019845 301 HMYFAPPG 308 (335)
Q Consensus 301 ~ly~~~~~ 308 (335)
++...+++
T Consensus 328 ~Ln~ysk~ 335 (367)
T KOG1582|consen 328 YLNMYSKR 335 (367)
T ss_pred HhhcccCC
Confidence 98766543
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.52 E-value=2.9e-12 Score=114.70 Aligned_cols=287 Identities=13% Similarity=0.171 Sum_probs=186.1
Q ss_pred HHHHHHHHHhhhhHHhhHhhhcCCCcceehhH-HHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHH
Q 019845 5 FVATLLTILTSSQGILTTLSQSNGGYKYDYAT-VPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYL 83 (335)
Q Consensus 5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~-~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~ 83 (335)
+..+.-++......+..|+.-.+ ++|+..- .++.+.+.+.+.. .+. +.-+ .-.....+|+..+++..+++++.
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~--y~f~~~l~l~~~Q~l~s~~~v-~~l-k~~~--lv~~~~l~~~~~kk~~P~~~lf~ 88 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSS--YNFPMGLLLMLLQSLASVLVV-LVL-KRLG--LVNFRPLDLRTAKKWFPVSLLFV 88 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHH-HHH-HHhc--eeecCCcChHHHHHHccHHHHHH
Confidence 33444555555666666776544 6677765 3345555554321 112 2211 11112335677777778888998
Q ss_pred HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHH
Q 019845 84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGY 163 (335)
Q Consensus 84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~ 163 (335)
+.-...-.+++|++.+++++++...|+++++....++|.|.++.-|.++....+|......++..- ...|.
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf---------~~~gY 159 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF---------NLRGY 159 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee---------cchhH
Confidence 888888899999999999999999999999999999999999999999999999998876654331 23488
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH-hhhcccccccCCcccccccccc-hHHHHHHHH
Q 019845 164 LLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRL-LLDDFRGGFEKGPWWQRLFDGY-NITTWMVVF 241 (335)
Q Consensus 164 ~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 241 (335)
.+++...+..+...++.||..+..+.+.+.....-.+.+.+...+.. ...|+.+...+ +..+ ....|..+.
T Consensus 160 ~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~-------~~~~~~~~~~~~~~ 232 (314)
T KOG1444|consen 160 SWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLN-------FDNWSDSSVLVVML 232 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhh-------cccccchhHHHHHH
Confidence 99999999999999999998876543221111111233444444333 23444311111 1111 223344444
Q ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 019845 242 NLGSTGLLVSW----LMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGMLVDI 313 (335)
Q Consensus 242 ~~ai~g~~~~~----~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~~~~ 313 (335)
..++.|..+.| +.+..++..-..........+.+.+.+++|++.++.-++|..+-++|..+|+....++++.
T Consensus 233 lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 233 LSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred HHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence 44444544443 4455555555555544455666777778899999999999999999999998776555443
No 29
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.48 E-value=1.3e-14 Score=124.83 Aligned_cols=226 Identities=16% Similarity=0.230 Sum_probs=167.3
Q ss_pred cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
.+..||. |.+.|+.+.-+|.....|.||++....+++.+..++.+.+++|++||.|+.+.|+.|+.++..||.++..
T Consensus 74 ~~~~~~h---Yilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~ 150 (336)
T KOG2766|consen 74 IKAKWRH---YILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVF 150 (336)
T ss_pred HHHHHHH---hhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEE
Confidence 3444664 6777888888999999999999999999999999999999999999999999999999999999998877
Q ss_pred cCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcc
Q 019845 145 KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPW 224 (335)
Q Consensus 145 ~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (335)
.+...+ ..+..+++..|+.+++.++-++|..++.+|.+.|+- +......++.++|.+++.+-.+.+. ...
T Consensus 151 sDV~ag-d~aggsnp~~GD~lvi~GATlYaVSNv~EEflvkn~--d~~elm~~lgLfGaIIsaIQ~i~~~-~~~------ 220 (336)
T KOG2766|consen 151 SDVHAG-DRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVKNA--DRVELMGFLGLFGAIISAIQFIFER-HHV------ 220 (336)
T ss_pred eeeccc-cccCCCCCccCcEEEEecceeeeeccccHHHHHhcC--cHHHHHHHHHHHHHHHHHHHHhhhc-cce------
Confidence 654321 112246788899999999999999999999988865 3344456778889988888754321 111
Q ss_pred cccccccchHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhh
Q 019845 225 WQRLFDGYNITTWMVV---FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLH 301 (335)
Q Consensus 225 ~~~~~~~~~~~~~~~i---~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ 301 (335)
.--+|++.....+ +..-+...+....+|..++..-+....++-.++.++ ..||-+.+|...+..+.+..|..
T Consensus 221 ---~tl~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~Gli 295 (336)
T KOG2766|consen 221 ---STLHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLI 295 (336)
T ss_pred ---eeEeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhE
Confidence 0112332222111 112223344455566666666666666677777777 78888999999999999999999
Q ss_pred hccCCCC
Q 019845 302 MYFAPPG 308 (335)
Q Consensus 302 ly~~~~~ 308 (335)
+|....+
T Consensus 296 iYs~re~ 302 (336)
T KOG2766|consen 296 IYSTREK 302 (336)
T ss_pred Eeecccc
Confidence 9965444
No 30
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.43 E-value=1e-11 Score=112.78 Aligned_cols=220 Identities=19% Similarity=0.227 Sum_probs=150.8
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA 158 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~ 158 (335)
+.+-++.|.....||.+++.+..+++.+++-+||..++..+.+||+++.+.+++++.+.||+++...+..++ .|...+.
T Consensus 166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~-~~~~a~~ 244 (416)
T KOG2765|consen 166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQN-SDLPASR 244 (416)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccc-ccCCccc
Confidence 446788999999999999999999999999999999999999999999999999999999999977654332 1222345
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHH---HHHHHHHHhhhcccccccCCcccccccccchHH
Q 019845 159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFG---AIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNIT 235 (335)
Q Consensus 159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (335)
+..|.++.+++|+.+|++.+..||...+|+...-++ .++...| .++..+..++.+.- ..|. |.-.+..
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~-lffGfvGLfnllllwP~l~iL~~~-~~e~-------F~lP~~~ 315 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQ-LFFGFVGLFNLLLLWPPLIILDFF-GEER-------FELPSST 315 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHH-HHHHHHHHHHHHHHhHHHHHHHHh-ccCc-------ccCCCCc
Confidence 688999999999999999999998777664222222 2223323 22322222222211 1111 1111111
Q ss_pred HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845 236 TWMVVFNLGSTGLLVS-----WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPG 308 (335)
Q Consensus 236 ~~~~i~~~ai~g~~~~-----~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~ 308 (335)
....++...+.+.+++ ...-..++.+.....+++++.+.+...++-|.++++.+++|...|+.|-.+.|....
T Consensus 316 q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 316 QFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 1111222223333333 222234455555555678899999999999999999999999999999887776543
No 31
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.32 E-value=5.5e-09 Score=90.48 Aligned_cols=215 Identities=12% Similarity=0.038 Sum_probs=138.0
Q ss_pred chhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCC
Q 019845 68 EWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC 147 (335)
Q Consensus 68 ~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~ 147 (335)
+|+....| +......|.++|.+++.+|.+++..+.++.|+.++++ ..||.. +...+.+.+.|..+..-.+.
T Consensus 70 ~~~~~~~y---GvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~----~sRr~~--d~vwvaLAvlGi~lL~p~~~ 140 (292)
T COG5006 70 QRLALLAY---GVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALL----SSRRLR--DFVWVALAVLGIWLLLPLGQ 140 (292)
T ss_pred hhHHHHHH---HHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHH----hccchh--hHHHHHHHHHHHHhheeccC
Confidence 45544433 5667889999999999999999999999999998875 345554 44455566777776653332
Q ss_pred CccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCccccc
Q 019845 148 GEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQR 227 (335)
Q Consensus 148 ~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (335)
+. ++.+..|..+.+.+..||+.+-+..+|..+.++..- -...-+ ..+.++.++...... ++ .
T Consensus 141 ~~------~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~-g~a~gm-~vAaviv~Pig~~~a-------g~---~ 202 (292)
T COG5006 141 SV------WSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTA-GVAVGM-LVAALIVLPIGAAQA-------GP---A 202 (292)
T ss_pred Cc------CcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCch-HHHHHH-HHHHHHHhhhhhhhc-------ch---h
Confidence 22 133457999999999999999888888775443211 111111 123333222221111 10 1
Q ss_pred ccccchHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845 228 LFDGYNITTWMVVFNLGSTGLLVS-----WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 302 (335)
Q Consensus 228 ~~~~~~~~~~~~i~~~ai~g~~~~-----~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l 302 (335)
++ .++ .....+..++.+..+. ..+++.+...-+...+++|.++.+.|++++||.+|+.||+|++.|+.+..-
T Consensus 203 l~-~p~--ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 203 LF-SPS--LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred hc-ChH--HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 11 122 1111122233333333 355666666666777889999999999999999999999999999998876
Q ss_pred ccCCCCCCCC
Q 019845 303 YFAPPGMLVD 312 (335)
Q Consensus 303 y~~~~~~~~~ 312 (335)
.....+|+..
T Consensus 280 ~~lt~~~~~~ 289 (292)
T COG5006 280 STLTARKPAV 289 (292)
T ss_pred cccccCCCCC
Confidence 6666555543
No 32
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.29 E-value=5.8e-11 Score=92.03 Aligned_cols=138 Identities=18% Similarity=0.192 Sum_probs=111.6
Q ss_pred ChhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845 1 MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI 80 (335)
Q Consensus 1 ~~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~ 80 (335)
|.|.+.-++..++++..+++.|..- +..++...-++|.++.+.++..+....++.+..... +.|.+....+.|+
T Consensus 2 ~~~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~--~~k~~lflilSGl 75 (140)
T COG2510 2 MAAIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI--GPKSWLFLILSGL 75 (140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc--CcceehhhhHHHH
Confidence 3566677888999999999999986 556777788899999888877776655543221111 2233334566777
Q ss_pred HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 81 IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 81 l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
....+-.++|.|++.-+++...-+..++|++++++++++||||++.++|+|+.+..+|+.++..
T Consensus 76 a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 76 AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 7889999999999999999999999999999999999999999999999999999999988753
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.27 E-value=1.4e-12 Score=113.62 Aligned_cols=216 Identities=17% Similarity=0.221 Sum_probs=161.8
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCccccc
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAA 158 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~ 158 (335)
++.+.+.-....+.++|.+.+-+++-++...+|+.+++++++|+|-+..-..+.++...|-.+-...++.+ ..-
T Consensus 109 svVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~------~~l 182 (347)
T KOG1442|consen 109 SVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGST------GTL 182 (347)
T ss_pred hheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccccc------Ccc
Confidence 34455555555668999999999999999999999999999999999888887777666664432222111 234
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhh-cccccccCCcccccccccchHHHH
Q 019845 159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTW 237 (335)
Q Consensus 159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (335)
+..|.++++.++++-|+.++|++|.....++.+|...+.....+.++.++...+. |.... ..+.+-+.+..|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v-------~~~~~l~a~~Fw 255 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAV-------VGFPHLPAIKFW 255 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHH-------cCcccchHHHHH
Confidence 4679999999999999999999987776667888888888888888777766442 22111 112223355677
Q ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 238 MVVFNLGSTGLLVSWLM----KYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 238 ~~i~~~ai~g~~~~~~l----k~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
..+...++.|..++++. |..++.+.++..+.....-+++++.+++|.-+..-|-|-.+|+.|...|.+.+
T Consensus 256 ~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk 329 (347)
T KOG1442|consen 256 ILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVK 329 (347)
T ss_pred HHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHH
Confidence 77666777787777654 55677777777777777778899999999999999999999999998887643
No 34
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.17 E-value=1.4e-09 Score=92.31 Aligned_cols=279 Identities=15% Similarity=0.150 Sum_probs=178.2
Q ss_pred HHHHhhhhHHhhHhhh----cCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHH
Q 019845 10 LTILTSSQGILTTLSQ----SNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVH 85 (335)
Q Consensus 10 ~~l~~~~~~i~~k~~~----~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~ 85 (335)
.++..+.++|++...+ ++.++..+ ...++++.+.|.+-. .++.+.+- .+-| .++...+.+++++..+.
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMn-flll~vQSlvcvv~l-~iLk~l~~--~~fR----~t~aK~WfpiSfLLv~M 81 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMN-FLLLAVQSLVCVVGL-LILKFLRL--VEFR----LTKAKKWFPISFLLVVM 81 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchh-hHHHHHHHHHHHHHH-HHHHHHhH--hhee----hhhhhhhcCHHHHHHHH
Confidence 4556666777776664 34343333 235667777765432 22321111 0011 23444456778877777
Q ss_pred hHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHH
Q 019845 86 NNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLL 165 (335)
Q Consensus 86 ~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l 165 (335)
-.-.--+++|++.+.+++.++..++.+|.....++|.|++.....+.++..+.-.+..+.+.....-. .+.-..|.++
T Consensus 82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~--~~~lN~GY~W 159 (309)
T COG5070 82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFK--AQILNPGYLW 159 (309)
T ss_pred HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHH--hcccCCceEE
Confidence 67777899999999999999999999999999999999999999999888888777766543211000 0122468899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHh-hhcccccccCCcccccccccchH--HHHHHHHH
Q 019845 166 GVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLL-LDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFN 242 (335)
Q Consensus 166 ~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ 242 (335)
+...++.++..-...||..|-.+..-....++-...+.++.+...+ .+||.... .-++.+. ..|+.+-.
T Consensus 160 m~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--------~annl~~d~l~am~ISg 231 (309)
T COG5070 160 MFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--------LANNLSVDSLMAMFISG 231 (309)
T ss_pred EehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--------hhcCCChHHHHHHHHHH
Confidence 9999998887767777766643322122223334456666555443 35664320 1122222 33444422
Q ss_pred HH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 243 LG-ST-GLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 243 ~a-i~-g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
.. ++ ..+-+++.+..++..-++...+...-..+.|.++|||+.+...+....+=..+..+|...
T Consensus 232 l~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYava 297 (309)
T COG5070 232 LCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVA 297 (309)
T ss_pred HHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 11 11 233456667777777777777777788899999999999999999998888777777644
No 35
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.08 E-value=5.7e-09 Score=86.19 Aligned_cols=141 Identities=18% Similarity=0.150 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC-----CCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccc-c--ch
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKN-----NDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFD-G--YN 233 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~ 233 (335)
|.++++.+.++.|+..++.|+.++++ +.+.+....+....+.++.++.....|.....+.. ..... . .+
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~---~~~~~~~~~~~ 77 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFF---SEIFGEELSSD 77 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH---HHhhhhhhcch
Confidence 67889999999999999999999883 33444444555566777766665554433211110 00000 0 01
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845 234 ITTWMVVFNLGS----TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 305 (335)
Q Consensus 234 ~~~~~~i~~~ai----~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~ 305 (335)
...+..++..++ .+.....++++.+++..++...+..+...+.|+++|||++|..+++|.++.+.|+++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 78 PNFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 122222222232 234444678999999999999999999999999999999999999999999999999974
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.08 E-value=1.2e-09 Score=86.57 Aligned_cols=123 Identities=21% Similarity=0.170 Sum_probs=93.0
Q ss_pred HhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-HHHHhHHHHH
Q 019845 13 LTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-YLVHNNVQFA 91 (335)
Q Consensus 13 ~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~~~~~~l~f~ 91 (335)
.|+...++.|... +++++....+.+...... ...+....++++ ....++++.......+.+ ....+.+.+.
T Consensus 2 ~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (126)
T PF00892_consen 2 SWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKP---FKNLSPRQWLWLLFLGLLGTALAYLLYFY 73 (126)
T ss_pred eeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccc---ccCCChhhhhhhhHhhccceehHHHHHHH
Confidence 4677778888875 347888888999888875 333332222211 111123333334555666 5789999999
Q ss_pred HHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845 92 TLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ 143 (335)
Q Consensus 92 al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~ 143 (335)
++++++++..+++.++.|+++++++++++|||++++|+.|+.+.+.|+.++.
T Consensus 74 a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 74 ALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998763
No 37
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.05 E-value=1.6e-09 Score=85.10 Aligned_cols=71 Identities=24% Similarity=0.367 Sum_probs=63.4
Q ss_pred HHHHHH-HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCC
Q 019845 77 IPSIIY-LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCG 148 (335)
Q Consensus 77 i~a~l~-~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~ 148 (335)
..+.+. ..++.++++|+++.| +...++.++.|+++++++++++|||+++++|.++++.++|++++..++.+
T Consensus 39 ~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 39 LAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 335554 488999999999999 58889999999999999999999999999999999999999999876643
No 38
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.77 E-value=1.7e-07 Score=78.36 Aligned_cols=211 Identities=16% Similarity=0.189 Sum_probs=134.1
Q ss_pred HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCCCccccCcccccc
Q 019845 80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAP 159 (335)
Q Consensus 80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~ 159 (335)
.+.+..|+.+..+++.++++.++.+..++-.|+-++++..||+|+..-++++.++...|++++...+.. ..+.
T Consensus 61 i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~-------~a~e 133 (290)
T KOG4314|consen 61 IFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE-------HADE 133 (290)
T ss_pred EEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch-------hhhh
Confidence 456788999999999999999999999999999999999999999999999999999999999865432 1345
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCC---chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHH
Q 019845 160 IQGYLLGVLSACLSALAGVYTEFLMKKNND---SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 236 (335)
Q Consensus 160 ~~G~~l~l~aal~~a~~~v~~~k~~k~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (335)
+.|+...+.++..+|++.|..|+.....+. +.++ ..+.++-..+.-...+....... |+ .+.+....
T Consensus 134 ~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~Fm--S~LGF~NL~~~~~~~lIL~~T~V-E~-------~qsFA~~P 203 (290)
T KOG4314|consen 134 IIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFM--SCLGFFNLCFISFPALILAFTGV-EH-------LQSFAAAP 203 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHH--HHHHHHHHHHHhhhHHHHHHhch-HH-------HHHHhhCC
Confidence 789999999999999999999987754321 1111 11112222221111111000000 00 01111112
Q ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 237 WMVVFNLGS----TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 237 ~~~i~~~ai----~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
|......+. ....+.+-+-....+..+.-...+.+..+.+..++-+-..+...+.|.+++..|-.+.-.|.
T Consensus 204 WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 204 WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 322221111 11222222222223333333344555667788877777788899999999999976654443
No 39
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.75 E-value=2.8e-07 Score=71.87 Aligned_cols=65 Identities=12% Similarity=0.068 Sum_probs=61.2
Q ss_pred HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
++|..+..+...+++++|.+.+..+.++.++++++++++++|||++++|++|+.+..+|+.++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 56888999999999999999999999999999999999999999999999999999999988753
No 40
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.68 E-value=9.6e-06 Score=72.49 Aligned_cols=215 Identities=13% Similarity=0.166 Sum_probs=134.1
Q ss_pred hhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhh-hhHHHHHHHHHHHHhcccccHHHHH----HHHHHHHHHhhhcc
Q 019845 70 RSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMG-NLKIVTTGILFRLFLRRRLSTLQWM----AIVLLAVGTTTSQV 144 (335)
Q Consensus 70 ~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~-~~~pl~~alls~~~l~er~~~~q~~----~i~l~~~Gv~iv~~ 144 (335)
+.+..-.+.+++-.+.+..+|.+++++..+.+.=+. ..+.+.+++.++++++|--+..++. ++++..+|+.+...
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 444455678889999999999999999887666554 7788889999999999999888876 78888999998877
Q ss_pred cCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHH-HHHHhhhcccccccCCc
Q 019845 145 KGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFN-MFRLLLDDFRGGFEKGP 223 (335)
Q Consensus 145 ~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 223 (335)
.+.+++..++ ..+.--|....+++.+.+..+.+..+- .+-++ +..-.-... |.++. .+..... ++.
T Consensus 123 ~~~~~~~~~~-~~~~~kgi~~Ll~stigy~~Y~~~~~~-~~~~~---~~~~lPqai-Gm~i~a~i~~~~~--~~~----- 189 (269)
T PF06800_consen 123 QDKKSDKSSS-KSNMKKGILALLISTIGYWIYSVIPKA-FHVSG---WSAFLPQAI-GMLIGAFIFNLFS--KKP----- 189 (269)
T ss_pred cccccccccc-ccchhhHHHHHHHHHHHHHHHHHHHHh-cCCCh---hHhHHHHHH-HHHHHHHHHhhcc--ccc-----
Confidence 6654432111 122235788888888888777666543 32221 111111111 22222 2222111 110
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH----HHHHHHHHHHHH
Q 019845 224 WWQRLFDGYNITTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTL----QLFLGIIICMMS 299 (335)
Q Consensus 224 ~~~~~~~~~~~~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~----~~~~G~~lVi~g 299 (335)
+++...+...+.-+.-+++.+..-...+..+....-..+.+.++++++.|++++||+=+. ..++|.++++.|
T Consensus 190 ----~~~k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G 265 (269)
T PF06800_consen 190 ----FFEKKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG 265 (269)
T ss_pred ----ccccchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence 111112211111122344555444444555555555566788999999999999999775 467788888877
Q ss_pred hh
Q 019845 300 LH 301 (335)
Q Consensus 300 v~ 301 (335)
..
T Consensus 266 ~i 267 (269)
T PF06800_consen 266 AI 267 (269)
T ss_pred hh
Confidence 54
No 41
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.63 E-value=1.4e-06 Score=78.29 Aligned_cols=129 Identities=14% Similarity=-0.020 Sum_probs=90.1
Q ss_pred hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehh--HHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845 3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYA--TVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI 80 (335)
Q Consensus 3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~--~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~ 80 (335)
.+++.++..+.++...+..|....+ .++. +....+.....++..+.....++.. . . ++++.......+.
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~-~--~~~~~~~~~~~~~ 199 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKK----EGPELLQFTGWVLLLGALLLLPFAWFLGPNP--Q-A--LSLQWGALLYLGL 199 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhc----CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--C-c--chHHHHHHHHHHH
Confidence 4567888999999999999988632 3322 2222334444443333333222211 1 1 2233322233344
Q ss_pred H-HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Q 019845 81 I-YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT 140 (335)
Q Consensus 81 l-~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~ 140 (335)
+ ......++++++++.+++..+++.++.|+++++++++++||+++..|+.|..+.+.|++
T Consensus 200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 4 46788899999999999999999999999999999999999999999999999999873
No 42
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.59 E-value=4.4e-07 Score=70.72 Aligned_cols=129 Identities=16% Similarity=0.278 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhh-hcccccccCCcccccccccchHHHHHHHH
Q 019845 163 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLL-DDFRGGFEKGPWWQRLFDGYNITTWMVVF 241 (335)
Q Consensus 163 ~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 241 (335)
..+.+++++++++..++.|--+++.|++. . ..--......+....... .+++.. ...+...|..+.
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~~vdp~~-A-t~IRtiVi~~~l~~v~~~~g~~~~~-----------~~~~~k~~lfli 71 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLEGVDPDF-A-TTIRTIVILIFLLIVLLVTGNWQAG-----------GEIGPKSWLFLI 71 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccCccH-H-HHHHHHHHHHHHHHHHHhcCceecc-----------cccCcceehhhh
Confidence 46789999999999887776666544321 1 111122223332222222 222211 011222333322
Q ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845 242 N----LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 304 (335)
Q Consensus 242 ~----~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~ 304 (335)
. .+++-++..+.+|..++....+.+.+++++++++|++++||++|..+++|+.+|.+|..+..
T Consensus 72 lSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 72 LSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 2 22333445566777777888888899999999999999999999999999999999976543
No 43
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.54 E-value=3.5e-06 Score=69.37 Aligned_cols=139 Identities=17% Similarity=0.254 Sum_probs=105.7
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcC---CCcceehhHHHHHHHHHHHHHHHHHHH-HhhcCCCC--Ccccc-----chhhh
Q 019845 4 YFVATLLTILTSSQGILTTLSQSN---GGYKYDYATVPFLAEVFKLVVSSILLW-REWRMPSS--PKMTT-----EWRSV 72 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~---~~~~~~~~~~v~~~e~~~l~~~~~l~~-~~~~~~~~--~~~~~-----~~~~~ 72 (335)
+++.+...+..+...+.+|....+ .++..++.+..........++..+... .|+..... ..... ..+..
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 466788889999999999887533 346678887887777777777655543 33221000 00110 12233
Q ss_pred hhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845 73 RLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTS 142 (335)
Q Consensus 73 ~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv 142 (335)
......+++....|...|..++++++.+++++...|.+.+.++++++++|+++..++.|+.+.+.|+..-
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 3456667788899999999999999999999999999999999999999999999999999999999764
No 44
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.53 E-value=1.3e-06 Score=68.99 Aligned_cols=121 Identities=16% Similarity=0.229 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH--HHHHHHHHHHHHHHH
Q 019845 172 LSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI--TTWMVVFNLGSTGLL 249 (335)
Q Consensus 172 ~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~ai~g~~ 249 (335)
++|...++.|+..++.+ +. ....+....+.+ .++.....+..+. .+ .+.... .....++..+++..+
T Consensus 2 ~~a~~~~~~k~~~~~~~-~~-~~~~~~~~~~~~-~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~ 70 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKKIS-PL-SITFWRFLIAGI-LLILLLILGRKPF-KN-------LSPRQWLWLLFLGLLGTALAYLL 70 (126)
T ss_pred eeeeHHHHHHHHhccCC-HH-HHHHHHHHHHHH-HHHHHHhhccccc-cC-------CChhhhhhhhHhhccceehHHHH
Confidence 56778889999887742 33 333343444444 2332222221110 00 111111 111122223455666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 250 VSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 250 ~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
..+.+++.+....+....++|+++.++++++++|++++.+++|..+++.|+.+.
T Consensus 71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999999999999999999999999998764
No 45
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.37 E-value=1.7e-05 Score=72.80 Aligned_cols=67 Identities=19% Similarity=0.392 Sum_probs=61.5
Q ss_pred HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
+++.+++.+.+.|+.+.|.+..+=+.....++.++++..++|||+++++|.|..+..+|..++...+
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence 3567888999999999999999999999999999999999999999999999999999998765443
No 46
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.34 E-value=2.7e-05 Score=62.33 Aligned_cols=122 Identities=13% Similarity=0.024 Sum_probs=88.0
Q ss_pred ChhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845 1 MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI 80 (335)
Q Consensus 1 ~~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~ 80 (335)
|+.|++.++.++..+..=++.|+.-.+.+. .+.... +... +..... + +.. ...--.
T Consensus 1 ~~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~----~~~~-------~~~~~~----p-----~~~---i~lgl~ 56 (129)
T PRK02971 1 MMGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD----FIAA-------LLAFGL----A-----LRA---VLLGLA 56 (129)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH----HHHH-------HHHHhc----c-----HHH---HHHHHH
Confidence 678999999999999999999999532211 111110 1000 000000 0 000 112234
Q ss_pred HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 81 IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRL--FLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 81 l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~--~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
+|.++..++..+++..|++.+.-+.+..+..+++.++. ++||+++++||+|+.+.++|+.++..++
T Consensus 57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 68899999999999999999999999998888888885 8999999999999999999999987643
No 47
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.31 E-value=7.6e-06 Score=74.64 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=58.3
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT 141 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i 141 (335)
++...+.+.++++++++.|++......+..|++..+++++++||++++.|+.|..+.++|+.+
T Consensus 218 ~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 218 GLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 344567888999999999999999999999999999999999999999999999999999875
No 48
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.31 E-value=2.1e-05 Score=72.34 Aligned_cols=131 Identities=12% Similarity=0.066 Sum_probs=88.2
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHH
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYL 83 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~ 83 (335)
+++.++..+.++...+..|....+ +++.+..+.. ..... .+....++.. . ...++.........++...
T Consensus 158 ~~~~l~aa~~~A~~~v~~k~~~~~----~~~~~~~~~~--~~~~l-~~~~~~~~~~-~---~~~~~~~~~~l~~~~~~t~ 226 (295)
T PRK11689 158 YGLAFIGAFIWAAYCNVTRKYARG----KNGITLFFIL--TALAL-WIKYFLSPQP-A---MVFSLPAIIKLLLAAAAMG 226 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCC----CCchhHHHHH--HHHHH-HHHHHHhcCc-c---ccCCHHHHHHHHHHHHHHH
Confidence 456788888999999999887522 2222222211 11111 1111112111 1 1112222222223344456
Q ss_pred HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845 84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 145 (335)
Q Consensus 84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~ 145 (335)
+...++++++++.|++..+++.+..|++.++++++++||+++..|+.|..+.+.|+.+....
T Consensus 227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 68889999999999999999999999999999999999999999999999999999887653
No 49
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.27 E-value=3e-05 Score=73.06 Aligned_cols=64 Identities=16% Similarity=0.075 Sum_probs=59.4
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
.+...++++++++.+++.+++.....|++++++++++++|++++.|++|.++.+.|+.++.++.
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 3567788899999999999999999999999999999999999999999999999999987643
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.24 E-value=4.9e-05 Score=69.77 Aligned_cols=132 Identities=14% Similarity=0.100 Sum_probs=87.3
Q ss_pred HHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-HH
Q 019845 5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-YL 83 (335)
Q Consensus 5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~~ 83 (335)
++.++..+.++...+..|.... ++++... ....++...+..+....... . ...++.........+++ -.
T Consensus 151 ll~l~aa~~~a~~~v~~r~~~~----~~~~~~~-~~~~~~~~~~l~~~~~~~~~--~---~~~~~~~~~~~l~lgv~~t~ 220 (293)
T PRK10532 151 ALALGAGACWAIYILSGQRAGA----EHGPATV-AIGSLIAALIFVPIGALQAG--E---ALWHWSILPLGLAVAILSTA 220 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----cCCchHH-HHHHHHHHHHHHHHHHHccC--c---ccCCHHHHHHHHHHHHHHHH
Confidence 4567777888888888887752 2233322 22223332222222222211 0 11122221111223333 44
Q ss_pred HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
++..++++++++.+++.++++..++|++.++++++++||+++..|++|..+.+.|++......
T Consensus 221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 677899999999999999999999999999999999999999999999999999998876543
No 51
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.21 E-value=4.6e-05 Score=71.77 Aligned_cols=140 Identities=16% Similarity=0.192 Sum_probs=96.2
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCC---CcceehhHHHHHHHHHHHHHHHHHHH-HhhcCCCCC------cc-ccchhhh
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNG---GYKYDYATVPFLAEVFKLVVSSILLW-REWRMPSSP------KM-TTEWRSV 72 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~---~~~~~~~~~v~~~e~~~l~~~~~l~~-~~~~~~~~~------~~-~~~~~~~ 72 (335)
.+..++..+.++...+..|....+. +++++..+........+.++++++.. .|....... .. ...+..+
T Consensus 196 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 275 (350)
T PTZ00343 196 FWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGII 275 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHH
Confidence 3556777888899999998764321 12455554444444555555544432 222100000 00 0011111
Q ss_pred -hhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845 73 -RLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ 143 (335)
Q Consensus 73 -~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~ 143 (335)
......++.+...|.+.|.+++++++.++++....+|+++.++++++++|+++..|++|..+.+.|+.+..
T Consensus 276 l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs 347 (350)
T PTZ00343 276 IFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS 347 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence 12334566788999999999999999999999999999999999999999999999999999999998764
No 52
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.21 E-value=1.1e-05 Score=74.36 Aligned_cols=140 Identities=15% Similarity=0.119 Sum_probs=92.4
Q ss_pred HHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-cc-----cchhhhhh-hhH
Q 019845 5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPK-MT-----TEWRSVRL-FPI 77 (335)
Q Consensus 5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~-~~-----~~~~~~~~-~~i 77 (335)
++.++..+.++...+..|....+ +++++.+..+.....+.+...+.....+....... .. ........ ...
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLV 225 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHH
Confidence 45666777788888888765432 24666666666555555544444322111000000 00 00011111 112
Q ss_pred HHH-HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 78 PSI-IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 78 ~a~-l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
.+. .+...|.+.|.+++++++.++++....+|+++++++++++||+++..|++|..+.++|+.+.....
T Consensus 226 ~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k 295 (302)
T TIGR00817 226 AAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVK 295 (302)
T ss_pred HHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 222 455566788899999999999999999999999999999999999999999999999999887644
No 53
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.16 E-value=7.8e-05 Score=68.39 Aligned_cols=133 Identities=8% Similarity=-0.014 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH-H
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII-Y 82 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l-~ 82 (335)
.+..++..+.++...+..|..... + + .............+..+........ . . ...+.+........+++ .
T Consensus 152 ~l~~l~a~~~~a~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~i~~l~i~~s 223 (292)
T PRK11272 152 AILILIASASWAFGSVWSSRLPLP--V--G-MMAGAAEMLAAGVVLLIASLLSGER-L-T-ALPTLSGFLALGYLAVFGS 223 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC--c--c-hHHHHHHHHHHHHHHHHHHHHcCCc-c-c-ccCCHHHHHHHHHHHHHHH
Confidence 455667777888888877765321 1 1 1122222222222222222222110 0 0 11122222222233333 4
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
.+...++++++++.+++..+++..+.|++.++++++++||+++..|+.|..+.+.|+.+...
T Consensus 224 ~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 224 IIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999988765
No 54
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.15 E-value=0.00018 Score=57.60 Aligned_cols=121 Identities=17% Similarity=0.110 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHH
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVF 241 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 241 (335)
|.++++.+.++.+.+.+..|+-.++.+... .... . . ....... +. ..+.+..+.
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~--~~~~----~-~-~~~~~~~-----------------~p-~~~i~lgl~ 56 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLPLLS--HAWD----F-I-AALLAFG-----------------LA-LRAVLLGLA 56 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCCcc--chhH----H-H-HHHHHHh-----------------cc-HHHHHHHHH
Confidence 677888888888899999888766543211 0000 0 0 0000000 00 013444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCCCccHHHHHHHHHHHHHhhhccCCCC
Q 019845 242 NLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVY--LFNFKPTLQLFLGIIICMMSLHMYFAPPG 308 (335)
Q Consensus 242 ~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l--~fge~~t~~~~~G~~lVi~gv~ly~~~~~ 308 (335)
..+++..+..+++++.+........+...++..+.++. +|||++|+.+++|.++|+.|+++.+++++
T Consensus 57 ~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 57 GYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 55666667778888888777766666666667777774 89999999999999999999998776544
No 55
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.10 E-value=0.00013 Score=66.99 Aligned_cols=68 Identities=13% Similarity=0.028 Sum_probs=61.5
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
++...+...+++.++++.|++..+.+.+..|++..++++++++|+++..|+.|..+.++|+.++..++
T Consensus 220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44455788899999999999999999999999999999999999999999999999999998876543
No 56
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=98.06 E-value=0.00016 Score=56.05 Aligned_cols=67 Identities=21% Similarity=0.263 Sum_probs=57.5
Q ss_pred HHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845 79 SIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 145 (335)
Q Consensus 79 a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~ 145 (335)
-.+|.++..+...+++++|.+.+..+ .....+.+++.+++++||++++.|+.|+.+..+|+..+...
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 34567777788888999998777766 56899999999999999999999999999999999988653
No 57
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.93 E-value=0.015 Score=54.17 Aligned_cols=169 Identities=9% Similarity=-0.086 Sum_probs=101.2
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccc-cchhhhhhhhHHHHHH
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMT-TEWRSVRLFPIPSIIY 82 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~i~a~l~ 82 (335)
|+.+++..+.+++..+-.|..++-.=|.|+. ...++.-++.-.....+. .+. -....+ .+.+.+..-.+.+++-
T Consensus 9 ~~~~~i~~~~~GS~~~p~K~~k~w~wE~~W~-v~gi~~wl~~~~~~g~~~--~~~--f~~~~~~~~~~~~~~~~l~G~~W 83 (345)
T PRK13499 9 IIWHLIGGASSGSFYAPFKKVKKWSWETMWS-VGGIFSWLILPWLIAALL--LPD--FWAYYSSFSGSTLLPVFLFGALW 83 (345)
T ss_pred HHHHHHHHHHhhcccccccccCCCchhHHHH-HHHHHHHHHHHHHHHHHH--hhh--HHHHHHhcCHHHHHHHHHHHHHH
Confidence 5667788888888888888865322233433 122222222111001111 110 000111 2234444455678888
Q ss_pred HHHhHHHHHHHhcCChhHHHH-hhhhHHHHHHHHHHHHhcccc---cH----HHHHHHHHHHHHHhhhcccCCCccccC-
Q 019845 83 LVHNNVQFATLTYVDTSTYQI-MGNLKIVTTGILFRLFLRRRL---ST----LQWMAIVLLAVGTTTSQVKGCGEALCD- 153 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~l-l~~~~pl~~alls~~~l~er~---~~----~q~~~i~l~~~Gv~iv~~~~~~~~~~~- 153 (335)
.+.|..++.+++++..+...- -..++.+..+++..++++|=- +. .-..|+++.++|+.+....+...++.+
T Consensus 84 ~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~~~~ 163 (345)
T PRK13499 84 GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKERKMG 163 (345)
T ss_pred HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 999999999999998876654 467788889999999888533 33 346778888999999887332111100
Q ss_pred ---cccccchhHHHHHHHHHHHHHHHH
Q 019845 154 ---SLFAAPIQGYLLGVLSACLSALAG 177 (335)
Q Consensus 154 ---~~~~~~~~G~~l~l~aal~~a~~~ 177 (335)
....+.--|+++.+++.+.+++.+
T Consensus 164 ~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 164 IKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred cccccccchHhHHHHHHHHHHHHHHHH
Confidence 111233469999999999988877
No 58
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=97.93 E-value=0.00039 Score=63.97 Aligned_cols=64 Identities=22% Similarity=0.140 Sum_probs=59.1
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
.+...+++.++++++++..+.+....|++.+++++++++|+++..||+|..+.++|+.+...+.
T Consensus 226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 4677788999999999999999999999999999999999999999999999999999876544
No 59
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.88 E-value=0.00015 Score=57.10 Aligned_cols=71 Identities=8% Similarity=0.072 Sum_probs=62.3
Q ss_pred hHHHHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 76 PIPSIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 76 ~i~a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
.+.-.+|..+..+...+++++|.+.+..+ .....+.+++.+++++||++++.|+.++.+.++|+..+...+
T Consensus 34 ~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 34 ILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 34456788899999999999999887777 479999999999999999999999999999999999886543
No 60
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.82 E-value=0.00034 Score=55.03 Aligned_cols=67 Identities=13% Similarity=0.217 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 241 FNLGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 241 ~~~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
...++.-.+.+.++|+.+ ++.-+..+.+..+.+++.|+++|||++|+.+++|.++++.|+..-+...
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 334445556667777766 3333445567889999999999999999999999999999998776544
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.76 E-value=0.00027 Score=55.03 Aligned_cols=61 Identities=13% Similarity=0.138 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 243 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
.++...+...++++.+........++.++++.++|+++|||++|+.+++|.++++.|+.+-
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 3445566677888888777766667899999999999999999999999999999998654
No 62
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.74 E-value=0.0022 Score=57.56 Aligned_cols=135 Identities=12% Similarity=0.144 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhh-cccccccCCcccccccccchHHHHHH-
Q 019845 162 GYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLD-DFRGGFEKGPWWQRLFDGYNITTWMV- 239 (335)
Q Consensus 162 G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (335)
|..++++++++++...+..|. ..+ .+.......-..++.++.++..... +.+...++- ...+.........
T Consensus 3 g~~~~i~a~~~wg~~~~~~k~-~~~--~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 75 (256)
T TIGR00688 3 GIIVSLLASFLFGYMYYYSKL-LKP--LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERL----KRIQKRPLILSLLL 75 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-hcc--CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH----hCcccchHHHHHHH
Confidence 778899999999999999886 332 2333333333445554443322211 111000000 0000111110111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 240 -VFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 240 -i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
.+..+....+..+.+++.+....+...++.|+++.++++++++|+++..+++|.++.+.|+.+-
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 1112334455566778888888888889999999999999999999999999999999997644
No 63
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.72 E-value=0.00035 Score=53.66 Aligned_cols=67 Identities=13% Similarity=0.130 Sum_probs=58.3
Q ss_pred HHHHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845 77 IPSIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ 143 (335)
Q Consensus 77 i~a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~ 143 (335)
+.-.+|..+..+...+++.+|.+++..+ .....+.+++.+++++||++++.|+.++.+...|++...
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3345788899999999999998665554 559999999999999999999999999999999998874
No 64
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.71 E-value=0.00065 Score=62.30 Aligned_cols=69 Identities=13% Similarity=0.218 Sum_probs=63.1
Q ss_pred hHHHHHHHHHhHHHHHHHh-cCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHHhhhcc
Q 019845 76 PIPSIIYLVHNNVQFATLT-YVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQW----MAIVLLAVGTTTSQV 144 (335)
Q Consensus 76 ~i~a~l~~~~~~l~f~al~-~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~----~~i~l~~~Gv~iv~~ 144 (335)
.+.+++..+.+.+++.+.+ +.+++.+.++.+..|+..++++++++||+.+++|+ .|.++...|+.++..
T Consensus 215 ~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 215 ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 3467777889999999999 99999999999999999999999999999999999 999999999987753
No 65
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.66 E-value=0.00044 Score=53.46 Aligned_cols=67 Identities=19% Similarity=0.255 Sum_probs=57.8
Q ss_pred HHHHHHHHHhHHHHHHHhcCChhHHH-HhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845 77 IPSIIYLVHNNVQFATLTYVDTSTYQ-IMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ 143 (335)
Q Consensus 77 i~a~l~~~~~~l~f~al~~~~~~~~~-ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~ 143 (335)
+.-.+|..+..+.-.+++++|.+++. +-.....+.+++.+++++||++++.|+.++.+.+.|+....
T Consensus 40 ~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 40 LSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34456788889999999999986655 45668899999999999999999999999999999998763
No 66
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.63 E-value=0.00054 Score=52.25 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=59.6
Q ss_pred hHHHHHHHHHhHHHHHHHhcCChhH-HHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 76 PIPSIIYLVHNNVQFATLTYVDTST-YQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 76 ~i~a~l~~~~~~l~f~al~~~~~~~-~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
.+.-..+.++..+.-.+++++|.++ |.+-.....+-+++.+++++||+++..|++++.+..+|++....
T Consensus 34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 3445577888889999999999855 55668889999999999999999999999999999999988754
No 67
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.63 E-value=0.001 Score=61.33 Aligned_cols=142 Identities=18% Similarity=0.187 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHH--hhcCCCCCcc-ccchhhhhhhhHHH
Q 019845 3 WYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWR--EWRMPSSPKM-TTEWRSVRLFPIPS 79 (335)
Q Consensus 3 ~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~--~~~~~~~~~~-~~~~~~~~~~~i~a 79 (335)
.++++++..+..+...+..+....+ ++.++.+.++...+.++.+....... .+...+..+. .++........+.+
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~--~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKK--YGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 3567777888888888877665422 44566788999999888877655543 2221111111 11111122223445
Q ss_pred HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
+.........+.-.+..++.+.+++..++-+++.+++..++++++++.||.|+.+.+.|..+-..+.
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~ 299 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAK 299 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhh
Confidence 5556666677778899999999999999999999999999999999999999999999998876543
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.60 E-value=0.0011 Score=59.48 Aligned_cols=119 Identities=9% Similarity=0.095 Sum_probs=86.8
Q ss_pred hhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHH
Q 019845 2 QWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 2 ~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l 81 (335)
|.+..+++..+.......+.|+.+.+ . ..+++-+.++.+++..++....+ +..+.+..|++ .+.+++
T Consensus 138 kgi~~Ll~stigy~~Y~~~~~~~~~~------~-~~~~lPqaiGm~i~a~i~~~~~~--~~~~~k~~~~n----il~G~~ 204 (269)
T PF06800_consen 138 KGILALLISTIGYWIYSVIPKAFHVS------G-WSAFLPQAIGMLIGAFIFNLFSK--KPFFEKKSWKN----ILTGLI 204 (269)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCC------h-hHhHHHHHHHHHHHHHHHhhccc--ccccccchHHh----hHHHHH
Confidence 45667777777777777777775432 2 24445566666666555432111 11122334555 467999
Q ss_pred HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHH
Q 019845 82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIV 133 (335)
Q Consensus 82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~ 133 (335)
+.+.|.+++.+.+....++...+.|+.++..++.+.+++||+=+++++..+.
T Consensus 205 w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~ 256 (269)
T PF06800_consen 205 WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTL 256 (269)
T ss_pred HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999886544
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.53 E-value=0.0013 Score=50.95 Aligned_cols=65 Identities=14% Similarity=0.186 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
.++.-.+.+.++|+.+ ++.-+..+.+..+.+++.|+++|||++|+.+++|+++++.|+..-+...
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 3444455566777665 3333445567889999999999999999999999999999998776543
No 70
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.52 E-value=0.0041 Score=56.20 Aligned_cols=71 Identities=17% Similarity=0.219 Sum_probs=63.0
Q ss_pred hhHHHHHHH-HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845 75 FPIPSIIYL-VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 145 (335)
Q Consensus 75 ~~i~a~l~~-~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~ 145 (335)
....+++.. +...+++.+++..+++..+.+..+.|++.+++++++++|+++.+++.|..+...|+.+....
T Consensus 217 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 217 LLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 344455544 58899999999999999999999999999999999999999999999999999999988654
No 71
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.38 E-value=0.0022 Score=50.04 Aligned_cols=62 Identities=18% Similarity=0.266 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 245 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 245 i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
.......+..++.++ .......+.|+++.++|+++++|+++..+++|.++++.|+.+-..++
T Consensus 47 ~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~ 108 (113)
T PF13536_consen 47 VAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSD 108 (113)
T ss_pred HHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhh
Confidence 344555677788885 55577788999999999999999999999999999999987765543
No 72
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.25 E-value=0.018 Score=53.64 Aligned_cols=63 Identities=16% Similarity=0.297 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 245 STGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 245 i~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
.+..+....++|.+-.........+++++.++|++++++++++.+++|+.+++.|+.+.....
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 456666677888887777888889999999999999999999999999999999987655443
No 73
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.22 E-value=0.0042 Score=47.44 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 242 NLGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 242 ~~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
...+.-.+.+..+|+.+ .+.-+..+....+.+.+.|+++|||+.|+..++|..+++.|+..-+..
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 33445556677788765 344466777888999999999999999999999999999998766543
No 74
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.17 E-value=0.0057 Score=47.01 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845 243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 305 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~ 305 (335)
.++.-.+.+..+|..+ ++.-+..+.+..+.+.+.|+++|||++|+.+++|.++++.|+..-+.
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3445555667777665 44445666788899999999999999999999999999999877553
No 75
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.16 E-value=0.0068 Score=55.76 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=80.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHH
Q 019845 158 APIQGYLLGVLSACLSALAGVYTEFLMKKNND-SLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITT 236 (335)
Q Consensus 158 ~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (335)
+...|..+.+.++++.+.+..++||-.++.+. +.... . ++ .+... +...
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~---------------------~----~~---~~~l~--~~~W 53 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAG---------------------S----GG---RSYLR--RPLW 53 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc---------------------c----hh---hHHHh--hHHH
Confidence 34689999999999999999999987665422 10000 0 00 00000 1122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845 237 WMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 304 (335)
Q Consensus 237 ~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~ 304 (335)
|..+...+++...-...+.+++....++...++.+++.+++..+++|+++...++|.++++.|..+..
T Consensus 54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 32333334454444456777888888999999999999999999999999999999999999975443
No 76
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.12 E-value=0.0021 Score=48.36 Aligned_cols=55 Identities=22% Similarity=0.208 Sum_probs=34.6
Q ss_pred HHHHHHhHHHHHHHhcCChhHHHH-hhhhHHHHHHHHHHHHhcccccHHHHHHHHH
Q 019845 80 IIYLVHNNVQFATLTYVDTSTYQI-MGNLKIVTTGILFRLFLRRRLSTLQWMAIVL 134 (335)
Q Consensus 80 ~l~~~~~~l~f~al~~~~~~~~~l-l~~~~pl~~alls~~~l~er~~~~q~~~i~l 134 (335)
.+|..+..+...+++++|.+.+.- ......+.+++.+.+++||+++..||.++.+
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 478889999999999999977755 4679999999999999999999999999876
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.07 E-value=0.0079 Score=46.50 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845 243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 304 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~ 304 (335)
.++.-.+.+..+|+.+ ++.-+..+....+.+.+.|+++|||++|+.+++|.++++.|+..-+
T Consensus 45 ~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 45 VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3445556667777765 3444556677889999999999999999999999999999987643
No 78
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.93 E-value=0.0087 Score=54.39 Aligned_cols=68 Identities=26% Similarity=0.447 Sum_probs=62.2
Q ss_pred HHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCC
Q 019845 80 IIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC 147 (335)
Q Consensus 80 ~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~ 147 (335)
+.+.++..+.|.|+.+-|.+..+-+.+++.+..++++..+||||++....+|..+.++|-.++.....
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP 139 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAP 139 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecC
Confidence 35778999999999999999999999999999999999999999999999999999999987765443
No 79
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.89 E-value=0.0028 Score=49.19 Aligned_cols=68 Identities=21% Similarity=0.272 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845 75 FPIPSIIYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTS 142 (335)
Q Consensus 75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv 142 (335)
|.+|-+++-.+...+|+.++..|.+.+.-+ +++.-++|++.++++.+|..+++.|+|+.+...|+.+.
T Consensus 44 y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 44 YIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 678888999999999999999999888877 58999999999988777888888999999999998764
No 80
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.67 E-value=0.0039 Score=57.39 Aligned_cols=140 Identities=12% Similarity=0.114 Sum_probs=99.2
Q ss_pred HHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHH-HHHH-HhhcCCCC-CccccchhhhhhhhHHHHH
Q 019845 5 FVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSS-ILLW-REWRMPSS-PKMTTEWRSVRLFPIPSII 81 (335)
Q Consensus 5 ~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~-~l~~-~~~~~~~~-~~~~~~~~~~~~~~i~a~l 81 (335)
+......+..+.+-++.|......+++.+..+..-...-+.++..+ +... .++..... .....++. ......-+++
T Consensus 166 i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~sv~ 244 (316)
T KOG1441|consen 166 ISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNSVL 244 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHHHH
Confidence 3455667778888888888876555777776665554444444443 4332 23221100 00011122 2233444588
Q ss_pred HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845 82 YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 145 (335)
Q Consensus 82 ~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~ 145 (335)
+...|...|..+.++++-++++....|=.++...+++++++++++.|..|.++.++|+..-...
T Consensus 245 ~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~ 308 (316)
T KOG1441|consen 245 AFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRA 308 (316)
T ss_pred HHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999987543
No 81
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=96.62 E-value=0.069 Score=47.10 Aligned_cols=57 Identities=18% Similarity=0.343 Sum_probs=52.2
Q ss_pred HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Q 019845 84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT 140 (335)
Q Consensus 84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~ 140 (335)
+-..+...+++.+|..++.++.+..|.+.++..+++|+|++|..||+++.+..++.+
T Consensus 222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 445677889999999999999999999999999999999999999999988887775
No 82
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=96.34 E-value=0.15 Score=45.94 Aligned_cols=131 Identities=15% Similarity=0.068 Sum_probs=90.4
Q ss_pred HHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHH-HHhhcCCCCCccccchhhhhhhhHHHHHHHHHh
Q 019845 8 TLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILL-WREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHN 86 (335)
Q Consensus 8 ~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~ 86 (335)
+.+++.++..+.+-|..+. +..+...+..+.-+..++..+ +.+.. ...-...+.+...+....|..-.+--
T Consensus 154 l~la~sf~~Ygl~RK~~~v------~a~~g~~lE~l~l~p~al~yl~~l~~~--~~~~~~~~~~~~~LLv~aG~vTavpL 225 (293)
T COG2962 154 LALALSFGLYGLLRKKLKV------DALTGLTLETLLLLPVALIYLLFLADS--GQFLQQNANSLWLLLVLAGLVTAVPL 225 (293)
T ss_pred HHHHHHHHHHHHHHHhcCC------chHHhHHHHHHHHhHHHHHHHHHHhcC--chhhhcCCchHHHHHHHhhHHHHHHH
Confidence 4556677777777777753 333344443333333443333 33322 10001123344444555666777888
Q ss_pred HHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 87 NVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 87 ~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
.++-.|-+.+|.++.-++.+..|...-+++++++||+++..|+.+-.+.-+|+++...++
T Consensus 226 ~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 226 LLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999999999999999998886543
No 83
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.16 E-value=0.054 Score=48.32 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCCCCC
Q 019845 243 LGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPPGML 310 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~~~~ 310 (335)
.++.+.+....+++.|+.+-.......+++++++++++++.+++..||++..+...|+.+.+.++...
T Consensus 27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 35566666678899999998899999999999999999999999999999999999999888776554
No 84
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.15 E-value=0.00044 Score=60.26 Aligned_cols=268 Identities=13% Similarity=0.147 Sum_probs=147.2
Q ss_pred ChhHHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHH
Q 019845 1 MQWYFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSI 80 (335)
Q Consensus 1 ~~~~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~ 80 (335)
|.+++..++=.+.|++.++....- ++.++.+.--+-+. .+.+++.+++-.. ...+++.+..-.+.++
T Consensus 1 ~~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~G---ALifaiiv~~~~~-------p~~T~~~~iv~~isG~ 67 (288)
T COG4975 1 MMDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLG---ALIFAIIVFLFVS-------PELTLTIFIVGFISGA 67 (288)
T ss_pred ChhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHH---HHHHHHHHheeec-------CccchhhHHHHHHhhh
Confidence 678888889999999988765322 34445444322222 2223333332211 1112444444467788
Q ss_pred HHHHHhHHHHHHHhcCChhHHHHh-hhhHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHHhhhcccCCCccccCcc
Q 019845 81 IYLVHNNVQFATLTYVDTSTYQIM-GNLKIVTTGILFRLFLRRRLSTLQW----MAIVLLAVGTTTSQVKGCGEALCDSL 155 (335)
Q Consensus 81 l~~~~~~l~f~al~~~~~~~~~ll-~~~~pl~~alls~~~l~er~~~~q~----~~i~l~~~Gv~iv~~~~~~~~~~~~~ 155 (335)
+-......+|-|.+++..+.+.=+ ..++.+-+.+++++.++|--+..|. .++++...|+.+....+..+.+.|+
T Consensus 68 ~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~- 146 (288)
T COG4975 68 FWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEEN- 146 (288)
T ss_pred HhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccC-
Confidence 888999999999999988766644 4567788899999999998888774 4677788888887766543322111
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchH
Q 019845 156 FAAPIQGYLLGVLSACLSALAGVYTEFLMKKNNDS-LYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNI 234 (335)
Q Consensus 156 ~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (335)
.++.-.|....+.+.+.+-.+.+..+.. +-++.+ +.-|. . |.++..+..-..+ .+. .++.
T Consensus 147 ~~n~kkgi~~L~iSt~GYv~yvvl~~~f-~v~g~saiLPqA----i-GMv~~ali~~~~~-~~~---------~~~K--- 207 (288)
T COG4975 147 PSNLKKGIVILLISTLGYVGYVVLFQLF-DVDGLSAILPQA----I-GMVIGALILGFFK-MEK---------RFNK--- 207 (288)
T ss_pred hHhhhhheeeeeeeccceeeeEeeeccc-cccchhhhhHHH----H-HHHHHHHHHhhcc-ccc---------chHH---
Confidence 1122246666566666554444433322 212212 22221 2 2222222111111 000 1122
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH----HHHHHHHHHHHhh
Q 019845 235 TTWMVV---FNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQ----LFLGIIICMMSLH 301 (335)
Q Consensus 235 ~~~~~i---~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~----~~~G~~lVi~gv~ 301 (335)
.+|.-+ +.-+++++.+-+.-+..+.-+.-..+.+..+++++-|+++++|+=|.. .++|..+++.|..
T Consensus 208 ~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai 281 (288)
T COG4975 208 YTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAI 281 (288)
T ss_pred HHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhh
Confidence 223222 223445553333323222211112334567889999999999998864 4567777776653
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.15 E-value=0.032 Score=41.90 Aligned_cols=54 Identities=19% Similarity=0.253 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Q 019845 243 LGSTGLLVSWLMKYADNIIK-VYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIIC 296 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~a~~~-~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lV 296 (335)
.+++-.+.+..+|+.+-... ...+....+.+.+.|+++|||++|+.+++|.++|
T Consensus 39 ~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 39 YGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34444566677887764433 4456678899999999999999999999999876
No 86
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.01 E-value=0.071 Score=46.67 Aligned_cols=65 Identities=14% Similarity=0.209 Sum_probs=58.6
Q ss_pred HHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845 77 IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT 141 (335)
Q Consensus 77 i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i 141 (335)
...++..+...+..+.++|.++.+......++++++++++.++++|+++..+|.|+.+.+.|+.+
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 44466778888899999999999999999999999999999999999999999999999988643
No 87
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.95 E-value=0.69 Score=37.40 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHHHH
Q 019845 163 YLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVVFN 242 (335)
Q Consensus 163 ~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 242 (335)
.++.+.+..+-+++...+-++.++-+++ +.........+.+...+.....+.++. ....+.+++.|+.-+.
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~-~~as~i~~~~G~i~~~i~~~~~~~~~~--------~~~~~~p~w~~lGG~l 73 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSP-LVASFISFGVGFILLLIILLITGRPSL--------ASLSSVPWWAYLGGLL 73 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcc-HHHHHHHHHHHHHHHHHHHHHhccccc--------chhccCChHHhccHHH
Confidence 3456667777778888888877765433 333444445566666555544332211 1123445555543222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hh---CCCccHHHHHHHHHHHHHhhh
Q 019845 243 LGSTGLLVSWLMKYADNIIKVYST-SMAMLLTMVLSVY-LF---NFKPTLQLFLGIIICMMSLHM 302 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~a~~~~~~~-~~~~v~~~l~s~l-~f---ge~~t~~~~~G~~lVi~gv~l 302 (335)
.++.-....+...+.++....... .-+.+.+.+++.+ +| .+++++..++|.++++.|+.+
T Consensus 74 G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 74 GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 222223344555666654444433 3345566677765 33 467899999999999999764
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.50 E-value=0.042 Score=42.66 Aligned_cols=60 Identities=18% Similarity=0.218 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845 243 LGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 302 (335)
Q Consensus 243 ~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l 302 (335)
+..+.....+.+...| +.....+++++-+++.+.++++.+|..+...++|+.+|+.|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3445555556667666 34445567889999999999888888899999999999999754
No 89
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=94.33 E-value=2.3 Score=34.34 Aligned_cols=65 Identities=8% Similarity=0.122 Sum_probs=46.5
Q ss_pred HHHHHHHHHhHHHHHHHhcCChhHHHHhhhhH-HHHHHHHHHH----HhcccccHHHHHHHHHHHHHHhh
Q 019845 77 IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLK-IVTTGILFRL----FLRRRLSTLQWMAIVLLAVGTTT 141 (335)
Q Consensus 77 i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~-pl~~alls~~----~l~er~~~~q~~~i~l~~~Gv~i 141 (335)
..+++-...-.+..+..+.+.++...++.-+. .+...++-.+ .-|++++++|..|+.+..+|+.+
T Consensus 69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 34555556666666788888887776665544 4444555554 46799999999999999999863
No 90
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.70 E-value=3.3 Score=33.87 Aligned_cols=136 Identities=13% Similarity=0.176 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhhhcccccccCCcccccccccchHHHHHHH
Q 019845 161 QGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQLYTFGAIFNMFRLLLDDFRGGFEKGPWWQRLFDGYNITTWMVV 240 (335)
Q Consensus 161 ~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (335)
...+..+.+..+...++..+-++.+..+.+... ...-...|+...+......+..... ......+++.|..-
T Consensus 5 l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~A-s~isf~vGt~~L~~l~l~~~~~~~~-------a~~~~~pwW~~~GG 76 (150)
T COG3238 5 LYLLFAILAGALLPLQAAINGRLARYLGSPLLA-SLISFLVGTVLLLILLLIKQGHPGL-------AAVASAPWWAWIGG 76 (150)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHhcCCCch-------hhccCCchHHHHcc
Confidence 345666777777788888888877765534322 2222334555544443333321110 11234455655432
Q ss_pred HHHHHHHHHHH---HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-hC---CCccHHHHHHHHHHHHHhhhccCCC
Q 019845 241 FNLGSTGLLVS---WLMKYAD-NIIKVYSTSMAMLLTMVLSVYL-FN---FKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 241 ~~~ai~g~~~~---~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~-fg---e~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
.+|...+. ......+ +........-+.+.+.+++-+= || .+++...++|+++++.|+++.+..+
T Consensus 77 ---~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 77 ---LLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred ---chhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 22222222 2222233 3333334444566667776553 33 5689999999999999977665543
No 91
>PRK13499 rhamnose-proton symporter; Provisional
Probab=92.96 E-value=4 Score=38.29 Aligned_cols=75 Identities=5% Similarity=0.041 Sum_probs=53.8
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHH----HhhhhHHHHHHHHHHHHhccccc--H----HHHHHHHHHHHH
Q 019845 69 WRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQ----IMGNLKIVTTGILFRLFLRRRLS--T----LQWMAIVLLAVG 138 (335)
Q Consensus 69 ~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~----ll~~~~pl~~alls~~~l~er~~--~----~q~~~i~l~~~G 138 (335)
+++...-.+.+++...+|..++.+-+.++.+... +-.|+..++.++.+. ++||+=+ + .-+.++++..+|
T Consensus 257 ~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g 335 (345)
T PRK13499 257 ITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILA 335 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHH
Confidence 5555445677888899999999998877544333 444888888888877 5999877 3 346677777777
Q ss_pred Hhhhcc
Q 019845 139 TTTSQV 144 (335)
Q Consensus 139 v~iv~~ 144 (335)
..++..
T Consensus 336 ~~lig~ 341 (345)
T PRK13499 336 ANIVGL 341 (345)
T ss_pred HHHHhh
Confidence 777654
No 92
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=92.68 E-value=0.048 Score=47.88 Aligned_cols=91 Identities=16% Similarity=0.223 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHH
Q 019845 37 VPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILF 116 (335)
Q Consensus 37 ~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls 116 (335)
..++-+.++++++...+-..++ .+++.+..|++ .+|++.....|..++.+-+....++.--++|+..+...+-.
T Consensus 180 saiLPqAiGMv~~ali~~~~~~--~~~~~K~t~~n----ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGG 253 (288)
T COG4975 180 SAILPQAIGMVIGALILGFFKM--EKRFNKYTWLN----IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGG 253 (288)
T ss_pred hhhhHHHHHHHHHHHHHhhccc--ccchHHHHHHH----HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecce
Confidence 3455566777777666533321 11223334444 58899999999999999999999999999999999999999
Q ss_pred HHHhcccccHHHHHHHH
Q 019845 117 RLFLRRRLSTLQWMAIV 133 (335)
Q Consensus 117 ~~~l~er~~~~q~~~i~ 133 (335)
.++||||=+++||..+.
T Consensus 254 Il~L~ekKtkkEm~~v~ 270 (288)
T COG4975 254 ILFLGEKKTKKEMVYVI 270 (288)
T ss_pred EEEEeccCchhhhhhhh
Confidence 99999999999987554
No 93
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=92.67 E-value=2.1 Score=40.19 Aligned_cols=138 Identities=14% Similarity=0.074 Sum_probs=89.2
Q ss_pred HHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHH---HHHHHHHHhhcCCCCCcc-ccchhhhhhhhHHHHH
Q 019845 6 VATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLV---VSSILLWREWRMPSSPKM-TTEWRSVRLFPIPSII 81 (335)
Q Consensus 6 ~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~---~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~i~a~l 81 (335)
+.++..+..+....+.|.-..++|++.+... |+ .++++. +.-+.++.-... ..++. .++-.++......++.
T Consensus 251 laL~sA~~YavY~vllk~~~~~eg~rvdi~l--ff-GfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q~~~vv~~~li 326 (416)
T KOG2765|consen 251 LALLSALLYAVYTVLLKRKIGDEGERVDIQL--FF-GFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQFSLVVFNNLI 326 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccHHH--HH-HHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCceeEeeeHhhHH
Confidence 3456667777788888877666556665542 22 222222 211111110000 01111 1111233223344444
Q ss_pred -HHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccCC
Q 019845 82 -YLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKGC 147 (335)
Q Consensus 82 -~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~~ 147 (335)
.+++..++-+|.-.+++-+.++-...+++..++.-.++-++++++.+++|.+..++|-.++..++.
T Consensus 327 gtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 327 GTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 558999999999999999999999999999998888888999999999999999999998876543
No 94
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=92.50 E-value=0.63 Score=40.41 Aligned_cols=112 Identities=12% Similarity=0.125 Sum_probs=80.2
Q ss_pred eehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchh--hhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHH
Q 019845 32 YDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWR--SVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKI 109 (335)
Q Consensus 32 ~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~p 109 (335)
+.....||-.+++.+-+.+.+-+....+.. .....+.+ .+..+.+.+++-+.-..+.-|..+.++.++++++...+-
T Consensus 183 f~d~dtmfYnNllslPiL~~~s~~~edws~-~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNK 261 (309)
T COG5070 183 FKDFDTMFYNNLLSLPILLSFSFLFEDWSP-GNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNK 261 (309)
T ss_pred cchhhHHHHhhhHHHHHHHHHHHHhccCCc-chhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhh
Confidence 444567788877776654333222111111 11111222 233567888888888888889999999999999999999
Q ss_pred HHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcc
Q 019845 110 VTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 110 l~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
+..++-+.++++++.++....++++++...++...
T Consensus 262 lp~alaGlvffdap~nf~si~sillGflsg~iYav 296 (309)
T COG5070 262 LPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAV 296 (309)
T ss_pred ChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877766544
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=92.49 E-value=1.2 Score=39.97 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HhCCCc-----cHHHHHHHHHHHHHhhhccC
Q 019845 244 GSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVY-LFNFKP-----TLQLFLGIIICMMSLHMYFA 305 (335)
Q Consensus 244 ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l-~fge~~-----t~~~~~G~~lVi~gv~ly~~ 305 (335)
+.++.+.-.++|..+ ++-..+......+..+..|-+ +||+++ ++.-.+|+++++.|..+|..
T Consensus 66 ~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 66 ATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred hcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 445554445566554 344445566677777777744 676554 45788999999999887764
No 96
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.37 E-value=0.11 Score=47.50 Aligned_cols=72 Identities=11% Similarity=0.220 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 235 TTWMVVFNLGSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 235 ~~~~~i~~~ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
..|..++..++|-..-...+-+++++..++..+++.+.+++++..+++|++++.-.+|+++.+.|..+-...
T Consensus 66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 345556666666655445667789999999999999999999999999999999999999999996544433
No 97
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.98 E-value=1.2 Score=40.45 Aligned_cols=111 Identities=15% Similarity=0.199 Sum_probs=79.5
Q ss_pred CcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCC----CccccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHh
Q 019845 29 GYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS----PKMTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIM 104 (335)
Q Consensus 29 ~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll 104 (335)
++..+....|+--++...+.+..-+.-.+..... .+-++-++|+.++ +.+.+++....|+-++.-.+-+.+.+
T Consensus 197 ~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~---s~~gavGQ~FI~~TI~~FGslt~t~I 273 (327)
T KOG1581|consen 197 KYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY---STCGAVGQLFIFYTIERFGSLTFTTI 273 (327)
T ss_pred cCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH---HHhhhhhhheehhhHhhcccHHHHHH
Confidence 4556667777777777766664333222221111 1112235565443 56777888888889988888888999
Q ss_pred hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845 105 GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTS 142 (335)
Q Consensus 105 ~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv 142 (335)
.-++=++..+++.++.+++++..||.|+.+.|.|...=
T Consensus 274 ~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 274 MTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred HHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 99999999999999999999999999999988888653
No 98
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.43 E-value=0.44 Score=41.68 Aligned_cols=70 Identities=23% Similarity=0.261 Sum_probs=59.2
Q ss_pred HHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 77 IPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 77 i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
..++...+...+.|.-..+..|-+-+++..+.-.||.+.|+++++..++.+||+|..+.|.|...=...|
T Consensus 246 l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 246 LLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 3455666777888888888888888999999999999999999999999999999999999987644433
No 99
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=91.09 E-value=0.71 Score=41.25 Aligned_cols=76 Identities=14% Similarity=0.149 Sum_probs=63.6
Q ss_pred cccchhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHh
Q 019845 65 MTTEWRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTT 140 (335)
Q Consensus 65 ~~~~~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~ 140 (335)
.++.+|+..++...|+..+++..+.-.|+|-=-++-.++..++..++..+.-.+++||-.+++.|.|.++.....+
T Consensus 246 lP~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v 321 (346)
T KOG4510|consen 246 LPHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTV 321 (346)
T ss_pred cCccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHH
Confidence 3444565556667788888999999999999999999999999999999999999999999999998766544443
No 100
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.07 E-value=2.1 Score=39.16 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=93.2
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchh---hhhhhhHHHH
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWR---SVRLFPIPSI 80 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~i~a~ 80 (335)
|.....-++..+...+.+|..-.. ...+....++...++.+.......+..+...........|. -+..+.+.++
T Consensus 159 Y~w~~~n~~~~a~~~v~~kk~vd~--~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 159 YSWALANCLTTAAFVVYVKKSVDS--ANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc--ccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 445555566666666666655322 22344456666666666655444332222110000011122 2234567777
Q ss_pred HHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 81 IYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 81 l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
+-++-+.+.++..++.|+.++++......+.+.+-..++.+++.++....|+.++++|-++-+...
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 888899999999999999999999988888888888888899999999999999999988776543
No 101
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=86.32 E-value=3.5 Score=37.22 Aligned_cols=61 Identities=13% Similarity=0.099 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCC
Q 019845 246 TGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAP 306 (335)
Q Consensus 246 ~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~ 306 (335)
+..++...+.+.++..-.+.--..+++..+++..+++.+++..+|+|+..|.+|+.+....
T Consensus 99 gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 99 GSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred hhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 3444444455555444444445567899999999999999999999999999998765443
No 102
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=85.84 E-value=11 Score=35.14 Aligned_cols=134 Identities=14% Similarity=0.196 Sum_probs=73.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHH--HHHHHHHHHHHH---hhhcccccccCCcccccccccch
Q 019845 159 PIQGYLLGVLSACLSALAGVYTEFLMKKNNDSLYWQNVQL--YTFGAIFNMFRL---LLDDFRGGFEKGPWWQRLFDGYN 233 (335)
Q Consensus 159 ~~~G~~l~l~aal~~a~~~v~~~k~~k~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 233 (335)
.+.|+++..+++++++...+=.||. |+- + |+ ++|+ .+++.++..... ...|..+ .....+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkv-k~W--s-WE-s~Wlv~gi~swli~P~~~a~l~ip~~~~----------i~~~~~ 69 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKV-KGW--S-WE-SYWLVQGIFSWLIVPWLWALLAIPDFFS----------IYSATP 69 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhc-CCc--c-HH-HHHHHHHHHHHHHHHHHHHHHhCCcHHH----------HHHhCC
Confidence 4679999999999987776656653 332 1 22 2232 122332222111 1112211 111222
Q ss_pred H--H--HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC-------CccHHHHHHHHHHHHHhh
Q 019845 234 I--T--TWMVVFNLGSTGLLVSWLMKYAD-NIIKVYSTSMAMLLTMVLSVYLFNF-------KPTLQLFLGIIICMMSLH 301 (335)
Q Consensus 234 ~--~--~~~~i~~~ai~g~~~~~~lk~~~-a~~~~~~~~~~~v~~~l~s~l~fge-------~~t~~~~~G~~lVi~gv~ 301 (335)
. . .++.-+.-+++++.....+||.+ +.-.+++.-+..++.+++--++.|+ +-....++|.++++.|+.
T Consensus 70 ~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIa 149 (344)
T PF06379_consen 70 ASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIA 149 (344)
T ss_pred hhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHH
Confidence 1 1 11122334678888889999987 4444555555666666665555332 223478899999999988
Q ss_pred hccCCC
Q 019845 302 MYFAPP 307 (335)
Q Consensus 302 ly~~~~ 307 (335)
+..+.-
T Consensus 150 i~g~AG 155 (344)
T PF06379_consen 150 ICGKAG 155 (344)
T ss_pred HHhHHH
Confidence 776543
No 103
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.55 E-value=21 Score=29.25 Aligned_cols=53 Identities=11% Similarity=0.132 Sum_probs=35.8
Q ss_pred HHhcCChhH-HHHhhhhHHHHHHHHHHHHh----cccccHHHHHHHHHHHHHHhhhcc
Q 019845 92 TLTYVDTST-YQIMGNLKIVTTGILFRLFL----RRRLSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 92 al~~~~~~~-~~ll~~~~pl~~alls~~~l----~er~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
..+.+-+++ ..+....+.+.-.++-.+=+ ++++++.++.++++..+|+.++..
T Consensus 89 l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 89 LAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 555555544 44445566666665544433 489999999999999999766654
No 104
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=81.95 E-value=36 Score=31.33 Aligned_cols=75 Identities=23% Similarity=0.383 Sum_probs=63.9
Q ss_pred hhhhhhhhHHHHHHHHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845 69 WRSVRLFPIPSIIYLVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ 143 (335)
Q Consensus 69 ~~~~~~~~i~a~l~~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~ 143 (335)
+|.+.....++.+-+.--...|.-+..++.-+.++..-.+-+.+.+++..+++++++...|.|..+...|+..-.
T Consensus 240 ~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 240 LRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 455555566677766677777778888999999999999999999999999999999999999999999999873
No 105
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=80.74 E-value=3.9 Score=31.11 Aligned_cols=35 Identities=6% Similarity=0.145 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 269 AMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 269 ~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
+..+-+.+++++++|++++.++.|.++++++++..
T Consensus 72 tL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 72 TLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 34444567788999999999999999999988653
No 106
>PRK02237 hypothetical protein; Provisional
Probab=80.40 E-value=3.7 Score=31.39 Aligned_cols=46 Identities=15% Similarity=0.345 Sum_probs=34.8
Q ss_pred HHHHHHHH--HHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 262 KVYSTSMA--MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 262 ~~~~~~~~--~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
+.++.+-. ++.+.++++.+-|++||..-++|.++++.|+.+....|
T Consensus 60 RvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 60 RVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34444433 35566889999999999999999999999986654443
No 107
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=79.79 E-value=3.5 Score=31.46 Aligned_cols=46 Identities=15% Similarity=0.423 Sum_probs=35.3
Q ss_pred HHHHHHHH--HHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 262 KVYSTSMA--MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 262 ~~~~~~~~--~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
+.++.+-. ++.+.++++.+-|++||..-++|.++++.|+.+....|
T Consensus 58 RvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 58 RVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 44444433 45677889999999999999999999999987655444
No 108
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=75.67 E-value=12 Score=34.83 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccC
Q 019845 244 GSTGLLVSWLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFA 305 (335)
Q Consensus 244 ai~g~~~~~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~ 305 (335)
++.+-+....+.+.|+.+-.+...+.++.+.+++.++++++++..||...++-..|+.+.+.
T Consensus 103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 44544555666788888888888899999999999999999999999999999999988773
No 109
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=71.46 E-value=7.6 Score=29.59 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHhHHHHHHHhcCChhHHH-HhhhhHHHHHHHHHHHHhcccc-cHHHHHHHHHHHHHHhhh
Q 019845 75 FPIPSIIYLVHNNVQFATLTYVDTSTYQ-IMGNLKIVTTGILFRLFLRRRL-STLQWMAIVLLAVGTTTS 142 (335)
Q Consensus 75 ~~i~a~l~~~~~~l~f~al~~~~~~~~~-ll~~~~pl~~alls~~~l~er~-~~~q~~~i~l~~~Gv~iv 142 (335)
|.+|-+++-..+.++|+-+++.|.+.+. +.+++...|++++... |||+. ..+..+|..+..+|+.+.
T Consensus 55 Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 55 YLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccceeehhhhHHhhhhhhe
Confidence 6788888888999999999999986655 4566788899998877 55554 455577777777777543
No 110
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.67 E-value=23 Score=26.61 Aligned_cols=35 Identities=6% Similarity=0.186 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhc
Q 019845 269 AMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMY 303 (335)
Q Consensus 269 ~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly 303 (335)
+..+-..+|++.++|++.+.++.|..++..|+++.
T Consensus 79 tL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 79 TLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34444568889999999999999999999998754
No 111
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=68.71 E-value=7.3 Score=29.66 Aligned_cols=60 Identities=10% Similarity=0.072 Sum_probs=39.0
Q ss_pred HHHHhHHHHHHHhcCChhHHHHhhh-hHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845 82 YLVHNNVQFATLTYVDTSTYQIMGN-LKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT 141 (335)
Q Consensus 82 ~~~~~~l~f~al~~~~~~~~~ll~~-~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i 141 (335)
|..+--..=+|.+..+++.-.++.- .....-++++.+++||++++++..|-++...+|..
T Consensus 45 Y~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 45 YCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 4444444444555555554444432 22334467899999999999999998888777654
No 112
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.97 E-value=15 Score=27.65 Aligned_cols=31 Identities=13% Similarity=-0.015 Sum_probs=26.6
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHHhhh
Q 019845 112 TGILFRLFLRRRLSTLQWMAIVLLAVGTTTS 142 (335)
Q Consensus 112 ~alls~~~l~er~~~~q~~~i~l~~~Gv~iv 142 (335)
-..+|.+++||.+++.++.+-.+...|+..+
T Consensus 83 Fv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 83 FVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 3468999999999999999998888888665
No 113
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=63.01 E-value=37 Score=25.86 Aligned_cols=48 Identities=15% Similarity=0.296 Sum_probs=34.8
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhccCCC
Q 019845 260 IIKVYSTSMA--MLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYFAPP 307 (335)
Q Consensus 260 ~~~~~~~~~~--~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~~~~ 307 (335)
-=+..+.+-. ++.+.++.+++=|..||.+-++|..+.+.|+.+....|
T Consensus 57 ~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 57 FGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 3344555544 34566777778899999999999999999976655443
No 114
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=62.33 E-value=9.5 Score=29.08 Aligned_cols=42 Identities=12% Similarity=0.127 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhh
Q 019845 261 IKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHM 302 (335)
Q Consensus 261 ~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~l 302 (335)
...+.++++..++++.|..+-.|......++|+.++.+|+.+
T Consensus 81 avpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 81 AVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred eeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 334566778889999999887777888999999999999765
No 115
>PRK02237 hypothetical protein; Provisional
Probab=59.90 E-value=20 Score=27.49 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=33.2
Q ss_pred hhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845 105 GNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 145 (335)
Q Consensus 105 ~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~ 145 (335)
-..-++...+..+..-|+|+++..|.|..+.++|+.++...
T Consensus 66 GGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 66 GGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 34445555577788889999999999999999999988653
No 116
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=56.51 E-value=42 Score=30.50 Aligned_cols=48 Identities=13% Similarity=0.286 Sum_probs=40.8
Q ss_pred CChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhc
Q 019845 96 VDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQ 143 (335)
Q Consensus 96 ~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~ 143 (335)
.++-+.++....+=.+..++|...++...++++|+|..+.|.|-++..
T Consensus 266 ~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 266 TSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred ecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 344555666777888899999999999999999999999999998874
No 117
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.61 E-value=23 Score=27.04 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=34.3
Q ss_pred hhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhccc
Q 019845 104 MGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVK 145 (335)
Q Consensus 104 l~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~ 145 (335)
=-..-++...+..+.+=|+|+++..++|..+.++|+.++...
T Consensus 63 YGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 63 YGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 344456666677788889999999999999999999998764
No 118
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=50.90 E-value=12 Score=33.75 Aligned_cols=133 Identities=16% Similarity=0.146 Sum_probs=81.1
Q ss_pred HHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCC---CccccchhhhhhhhHHHHHH
Q 019845 6 VATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSS---PKMTTEWRSVRLFPIPSIIY 82 (335)
Q Consensus 6 ~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~i~a~l~ 82 (335)
..++..+.-+..++-+|-.-..-+...+ ..-...++.+++..++++...+..... ++. ..++-+..+.+.|++.
T Consensus 189 fGVlaSl~vAlnaiytkk~l~~v~~~iw--~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l-~a~~Fw~~mtLsglfg 265 (347)
T KOG1442|consen 189 FGVLASLAVALNAIYTKKVLPPVGDCIW--RLTAYNNVNALLLFLPLLILNGEFQAVVGFPHL-PAIKFWILMTLSGLFG 265 (347)
T ss_pred HHHHHHHHHHHHHHhhheecccccCeeh--hhHHHHHHHHHHHHHHHHHHcchHHHHcCcccc-hHHHHHHHHHHHHHHH
Confidence 3455566666677777744221111122 222444555555555554322221111 111 1223233456777887
Q ss_pred HHHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845 83 LVHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT 141 (335)
Q Consensus 83 ~~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i 141 (335)
+..|....+=.+.++|-+..+-...+-.-=+++++.+++|..+...|-+.++.+.|-..
T Consensus 266 F~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 266 FAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred HHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 77788877888899999999988888888899999999999988888766555555443
No 119
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=50.27 E-value=30 Score=29.71 Aligned_cols=53 Identities=9% Similarity=0.020 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHhhhcc
Q 019845 252 WLMKYADNIIKVYSTSMAMLLTMVLSVYLFNFKPTLQLFLGIIICMMSLHMYF 304 (335)
Q Consensus 252 ~~lk~~~a~~~~~~~~~~~v~~~l~s~l~fge~~t~~~~~G~~lVi~gv~ly~ 304 (335)
..+|..++...+........+..+++|.++||++....++.+.+-+.|+.+..
T Consensus 72 ~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmia 124 (290)
T KOG4314|consen 72 LALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIA 124 (290)
T ss_pred HHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEE
Confidence 34566666655555566777888999999999999999999999999975543
No 120
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=46.07 E-value=1.3e+02 Score=22.92 Aligned_cols=45 Identities=11% Similarity=0.169 Sum_probs=34.1
Q ss_pred HHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 102 QIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 102 ~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
..=-...+....+..++.=|.|+++..|.|..+.++|+.++...+
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 333444555566666777789999999999999999999887643
No 121
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=43.41 E-value=7.8 Score=34.94 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=0.0
Q ss_pred HHHHhcCChhHHHHhhhhHHHHHH-HHHHHHhccccc-HHHHHHHHHHHHHHhhhcccCCCccccCcccccchhHHHHHH
Q 019845 90 FATLTYVDTSTYQIMGNLKIVTTG-ILFRLFLRRRLS-TLQWMAIVLLAVGTTTSQVKGCGEALCDSLFAAPIQGYLLGV 167 (335)
Q Consensus 90 f~al~~~~~~~~~ll~~~~pl~~a-lls~~~l~er~~-~~q~~~i~l~~~Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l 167 (335)
|+-++-.+-+...++.++..+.+. |+-.+++|||+- +.-.+|+++.++-.++...=... .+.-+.|+++.+
T Consensus 41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLt-------GQ~LF~Gi~~l~ 113 (381)
T PF05297_consen 41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLT-------GQTLFVGIVILF 113 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhh-------ccHHHHHHHHHH
Confidence 444555555666666666555444 344455666653 34456666655544443321111 122356776655
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchHH
Q 019845 168 LSACLSALAGVYTEFLMKKNNDSLYW 193 (335)
Q Consensus 168 ~aal~~a~~~v~~~k~~k~~~~~~~~ 193 (335)
+.+++.=....|.+ ++++++.++|.
T Consensus 114 l~~lLaL~vW~Ym~-lLr~~GAs~Wt 138 (381)
T PF05297_consen 114 LCCLLALGVWFYMW-LLRELGASFWT 138 (381)
T ss_dssp --------------------------
T ss_pred HHHHHHHHHHHHHH-HHHHhhhHHHH
Confidence 55554333355644 66777767664
No 122
>PF11118 DUF2627: Protein of unknown function (DUF2627); InterPro: IPR020138 This entry represents uncharacterised membrane proteins with no known function.
Probab=43.24 E-value=1.2e+02 Score=21.68 Aligned_cols=52 Identities=15% Similarity=0.084 Sum_probs=36.9
Q ss_pred ChhHHHHHHHHHHhhhhHHhhHhhhc----CCCcceehhHHHHHHHHHHHHHHHHH
Q 019845 1 MQWYFVATLLTILTSSQGILTTLSQS----NGGYKYDYATVPFLAEVFKLVVSSIL 52 (335)
Q Consensus 1 ~~~~~~~~l~~l~~~~~~i~~k~~~~----~~~~~~~~~~~v~~~e~~~l~~~~~l 52 (335)
|+.+++++++++=+..+..=.|+-+. .-..+++....-|+..++.+++.+..
T Consensus 1 M~R~iAlliLvIPg~~a~yGiklMRD~~F~~~~~p~~~lwlqfl~G~~lf~~G~~F 56 (77)
T PF11118_consen 1 MQRFIALLILVIPGILAAYGIKLMRDTVFGILFSPFPSLWLQFLAGLLLFAIGVGF 56 (77)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999888888863 11244555556667666666655443
No 123
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=35.75 E-value=3e+02 Score=25.15 Aligned_cols=52 Identities=10% Similarity=0.048 Sum_probs=42.8
Q ss_pred cCChhHHHHhhhhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhhhcccC
Q 019845 95 YVDTSTYQIMGNLKIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTTSQVKG 146 (335)
Q Consensus 95 ~~~~~~~~ll~~~~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~iv~~~~ 146 (335)
...+.++..+....=..|.++|++++.++++-+..-+..+.+.|+.+-..+.
T Consensus 283 ~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 283 LFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 3456666666677777888999999999999999999999999998877665
No 124
>PRK14774 lipoprotein signal peptidase; Provisional
Probab=30.52 E-value=59 Score=27.64 Aligned_cols=29 Identities=10% Similarity=0.000 Sum_probs=17.4
Q ss_pred CCCCCCCCCCCCcCCCcchhh-hhhhcccC
Q 019845 306 PPGMLVDIPSTAKAAPDSLRE-VSVERRTD 334 (335)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 334 (335)
.+++..+.|.-++.+|++.+. -++|||+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (185)
T PRK14774 152 ETKPEPEKPKGTPKRKPAERKANGSGRPGG 181 (185)
T ss_pred ccccccccccCCCCCCcccccCCCCCCCCC
Confidence 333334444556777886665 67788763
No 125
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=27.90 E-value=3.9e+02 Score=22.87 Aligned_cols=15 Identities=13% Similarity=0.589 Sum_probs=8.8
Q ss_pred HHHHHHHHHhccccc
Q 019845 111 TTGILFRLFLRRRLS 125 (335)
Q Consensus 111 ~~alls~~~l~er~~ 125 (335)
.+++....++|+|++
T Consensus 188 ~i~~~~~~~lkkk~~ 202 (206)
T PF06570_consen 188 VIAFALRFYLKKKYN 202 (206)
T ss_pred HHHHHHHHHHHHHhC
Confidence 444555666676664
No 126
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=27.10 E-value=4.6e+02 Score=23.50 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhhhhHHhhHhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccchhhhhhhhHHHHHHH
Q 019845 4 YFVATLLTILTSSQGILTTLSQSNGGYKYDYATVPFLAEVFKLVVSSILLWREWRMPSSPKMTTEWRSVRLFPIPSIIYL 83 (335)
Q Consensus 4 ~~~~~l~~l~~~~~~i~~k~~~~~~~~~~~~~~~v~~~e~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~a~l~~ 83 (335)
|+..++.++.++++.+=+|......+ -..|.+...... +.+....... + .++. ..+ -.+-|++..
T Consensus 2 ~~a~~va~~~fGs~~vPvK~~~~gDg---~~fQw~~~~~i~--~~g~~v~~~~-~---~p~f----~p~--amlgG~lW~ 66 (254)
T PF07857_consen 2 YIACIVAVLFFGSNFVPVKKFDTGDG---FFFQWVMCSGIF--LVGLVVNLIL-G---FPPF----YPW--AMLGGALWA 66 (254)
T ss_pred chhHHHHHHHhcccceeeEeccCCCc---HHHHHHHHHHHH--HHHHHHHHhc-C---CCcc----eeH--HHhhhhhhh
Confidence 67788999999999999988764332 122223222221 1222121111 1 1111 111 235578899
Q ss_pred HHhHHHHHHHhcCChhHHHHhhhhHHHHHHHHHH-H-Hhcc--c---ccHHHHHHHHHHHHHHhhhcc
Q 019845 84 VHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFR-L-FLRR--R---LSTLQWMAIVLLAVGTTTSQV 144 (335)
Q Consensus 84 ~~~~l~f~al~~~~~~~~~ll~~~~pl~~alls~-~-~l~e--r---~~~~q~~~i~l~~~Gv~iv~~ 144 (335)
..|.+..-..+.+-.+...++-++.-+.+.-..- + ++++ + -.+..++|+++..+|..+...
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 9999999999999999999999886666654332 2 3332 2 234568888888888887644
No 127
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=25.84 E-value=1e+02 Score=17.72 Aligned_cols=20 Identities=20% Similarity=0.326 Sum_probs=11.6
Q ss_pred ccHHHHHHHHHHHHHhhhcc
Q 019845 285 PTLQLFLGIIICMMSLHMYF 304 (335)
Q Consensus 285 ~t~~~~~G~~lVi~gv~ly~ 304 (335)
-++..++|.+++..+.+++.
T Consensus 10 ~~~~~~~G~~l~~~~~~~~~ 29 (34)
T TIGR01167 10 NSLLLLLGLLLLGLGGLLLR 29 (34)
T ss_pred cHHHHHHHHHHHHHHHHHhe
Confidence 44567777755555554443
No 128
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.70 E-value=75 Score=22.08 Aligned_cols=23 Identities=13% Similarity=0.151 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHhhhccCCCCCC
Q 019845 288 QLFLGIIICMMSLHMYFAPPGML 310 (335)
Q Consensus 288 ~~~~G~~lVi~gv~ly~~~~~~~ 310 (335)
..++++++++.|..+|....+++
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~ 27 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKK 27 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc
Confidence 45688899999988776554443
No 129
>PF09946 DUF2178: Predicted membrane protein (DUF2178); InterPro: IPR019235 This entry, found in various hypothetical bacterial and archaeal proteins, has no known function, but contains several predicted transmembrane helices.
Probab=23.26 E-value=28 Score=26.93 Aligned_cols=17 Identities=12% Similarity=0.221 Sum_probs=13.4
Q ss_pred CCCcCCCcchhhhhhhc
Q 019845 315 STAKAAPDSLREVSVER 331 (335)
Q Consensus 315 ~~~~~~~~~~~~~~~~~ 331 (335)
..+|+|.-.++|+++.|
T Consensus 51 v~eDER~~~I~ekAs~~ 67 (111)
T PF09946_consen 51 VVEDERTERISEKASRR 67 (111)
T ss_pred chhhHHHHHHHHHHHHH
Confidence 34889999999988754
No 130
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=23.24 E-value=7e+02 Score=24.29 Aligned_cols=60 Identities=13% Similarity=0.105 Sum_probs=37.9
Q ss_pred HHhcccccHHHHHHHHHHHH--HHhhhcccCCCccccCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 019845 118 LFLRRRLSTLQWMAIVLLAV--GTTTSQVKGCGEALCDSLFAAPIQGYLLGVLSACLSALAGVYTEFLMKKNN 188 (335)
Q Consensus 118 ~~l~er~~~~q~~~i~l~~~--Gv~iv~~~~~~~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~k~~k~~~ 188 (335)
.+-|.|+.+.|++=++++.+ =++++...+. . -++....+.++.+-++-+.|....+|+.+
T Consensus 317 ~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEh----------i-~F~~AYliAa~a~i~Li~~Y~~~vl~~~k 378 (430)
T PF06123_consen 317 LLSKLRIHPIQYLLVGLALVLFYLLLLSLSEH----------I-GFNLAYLIAALACIGLISLYLSSVLKSWK 378 (430)
T ss_pred HHhcCcccHHHHHHHHHHHHHHHHHHHHHHhh----------h-chHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 34578999999875544332 2333333221 1 23566777888888888999999888654
No 131
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=22.89 E-value=1.4e+02 Score=29.05 Aligned_cols=50 Identities=20% Similarity=0.256 Sum_probs=31.4
Q ss_pred HHHHhCCCc-cHHHHHHHHHHHHHhhhcc--CCCCCCCCCCCCCcCCCcchhh
Q 019845 277 SVYLFNFKP-TLQLFLGIIICMMSLHMYF--APPGMLVDIPSTAKAAPDSLRE 326 (335)
Q Consensus 277 s~l~fge~~-t~~~~~G~~lVi~gv~ly~--~~~~~~~~~~~~~~~~~~~~~~ 326 (335)
+++.++... .....-|++-++.|+..+. ++++++.++|+-++-+.|..+.
T Consensus 176 a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~ 228 (448)
T COG2271 176 AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEI 228 (448)
T ss_pred HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhh
Confidence 444444322 2345566777778876554 4556677899988877776665
No 132
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.81 E-value=1.4e+02 Score=22.56 Aligned_cols=34 Identities=18% Similarity=0.268 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhh
Q 019845 108 KIVTTGILFRLFLRRRLSTLQWMAIVLLAVGTTT 141 (335)
Q Consensus 108 ~pl~~alls~~~l~er~~~~q~~~i~l~~~Gv~i 141 (335)
.|++..++.-.+|-|++.-.-+..+.+.++|+++
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 5677777777778888876556666677777654
Done!