Query 019847
Match_columns 335
No_of_seqs 818 out of 1567
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 07:59:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gga_A P55CDC, cell division c 100.0 2.4E-54 8.1E-59 368.9 43.8 317 3-326 92-409 (420)
2 4ggc_A P55CDC, cell division c 100.0 1.3E-51 4.6E-56 339.2 43.6 304 3-313 12-316 (318)
3 3ow8_A WD repeat-containing pr 100.0 6E-51 2.1E-55 335.1 40.9 285 13-311 29-320 (321)
4 1vyh_C Platelet-activating fac 100.0 3.9E-50 1.3E-54 341.4 39.3 282 15-311 107-410 (410)
5 4aez_A CDC20, WD repeat-contai 100.0 1.7E-49 5.7E-54 337.1 41.0 307 3-320 80-388 (401)
6 1got_B GT-beta; complex (GTP-b 100.0 1.9E-48 6.4E-53 323.2 41.0 278 15-309 54-340 (340)
7 3frx_A Guanine nucleotide-bind 100.0 5.4E-48 1.9E-52 317.6 39.7 285 13-313 14-318 (319)
8 3iz6_a 40S ribosomal protein R 100.0 4.3E-48 1.5E-52 325.8 36.0 287 15-314 65-377 (380)
9 2ynn_A Coatomer subunit beta'; 100.0 4.9E-48 1.7E-52 315.8 35.0 269 51-331 6-278 (304)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-47 8.9E-52 316.9 39.7 290 18-318 18-341 (345)
11 4gqb_B Methylosome protein 50; 100.0 5.2E-48 1.8E-52 319.9 34.7 288 16-316 30-335 (344)
12 2ynn_A Coatomer subunit beta'; 100.0 8.3E-47 2.8E-51 308.5 40.8 285 14-312 11-302 (304)
13 2pbi_B Guanine nucleotide-bind 100.0 6.8E-47 2.3E-51 315.3 40.7 279 15-309 63-354 (354)
14 2hes_X YDR267CP; beta-propelle 100.0 4.2E-47 1.4E-51 313.8 37.7 287 15-312 13-328 (330)
15 2xzm_R RACK1; ribosome, transl 100.0 2.4E-46 8.3E-51 311.0 40.1 283 15-313 20-341 (343)
16 4g56_B MGC81050 protein; prote 100.0 2.2E-47 7.7E-52 318.5 33.1 292 15-319 41-350 (357)
17 1nr0_A Actin interacting prote 100.0 1.8E-46 6E-51 334.6 40.2 306 14-332 145-590 (611)
18 4ery_A WD repeat-containing pr 100.0 1.5E-45 5E-50 302.5 41.6 282 14-311 21-311 (312)
19 1vyh_C Platelet-activating fac 100.0 1.3E-46 4.4E-51 319.8 34.9 267 52-332 102-389 (410)
20 1nr0_A Actin interacting prote 100.0 2.6E-46 9E-51 333.4 38.5 311 3-331 5-375 (611)
21 1erj_A Transcriptional repress 100.0 5.8E-45 2E-49 308.1 39.8 287 15-313 63-390 (393)
22 4aow_A Guanine nucleotide-bind 100.0 1.2E-44 4E-49 300.6 40.7 287 14-314 36-339 (340)
23 1got_B GT-beta; complex (GTP-b 100.0 9.5E-45 3.3E-49 301.0 36.9 269 50-332 47-321 (340)
24 3ow8_A WD repeat-containing pr 100.0 4.1E-45 1.4E-49 300.4 34.1 266 53-332 27-299 (321)
25 1sq9_A Antiviral protein SKI8; 100.0 4.3E-45 1.5E-49 309.6 33.2 287 13-313 13-396 (397)
26 3dm0_A Maltose-binding peripla 100.0 2.3E-44 7.8E-49 325.8 39.6 283 14-311 380-692 (694)
27 4e54_B DNA damage-binding prot 100.0 5.3E-45 1.8E-49 312.5 31.6 294 15-315 118-433 (435)
28 3zwl_B Eukaryotic translation 100.0 2.7E-43 9.2E-48 295.4 41.4 289 15-318 31-352 (369)
29 2pm9_A Protein WEB1, protein t 100.0 2.8E-45 9.5E-50 312.6 29.7 290 17-317 13-342 (416)
30 3ei3_B DNA damage-binding prot 100.0 1.2E-43 4.2E-48 299.4 36.9 283 14-312 71-382 (383)
31 2pbi_B Guanine nucleotide-bind 100.0 2E-43 6.8E-48 294.4 36.8 271 50-332 56-335 (354)
32 4ery_A WD repeat-containing pr 100.0 2.2E-43 7.4E-48 289.6 36.5 270 49-332 14-288 (312)
33 4gqb_B Methylosome protein 50; 100.0 1.1E-43 3.8E-48 294.0 34.2 247 16-273 82-334 (344)
34 1gxr_A ESG1, transducin-like e 100.0 1.3E-42 4.4E-47 287.8 40.4 282 14-311 49-336 (337)
35 4g56_B MGC81050 protein; prote 100.0 1E-44 3.4E-49 302.5 27.3 291 22-332 11-320 (357)
36 2ymu_A WD-40 repeat protein; u 100.0 5.7E-43 1.9E-47 310.7 40.1 273 15-309 302-577 (577)
37 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.2E-43 1.4E-47 291.6 36.6 274 49-332 6-312 (345)
38 2ymu_A WD-40 repeat protein; u 100.0 9.6E-43 3.3E-47 309.2 40.2 295 15-332 261-558 (577)
39 1k8k_C P40, ARP2/3 complex 41 100.0 8.9E-43 3E-47 292.8 37.6 289 15-314 7-363 (372)
40 3k26_A Polycomb protein EED; W 100.0 2.4E-43 8E-48 295.5 33.2 285 15-311 17-365 (366)
41 3i2n_A WD repeat-containing pr 100.0 1.7E-43 5.9E-48 295.4 30.3 285 15-314 17-355 (357)
42 3iz6_a 40S ribosomal protein R 100.0 1.4E-43 4.9E-48 298.3 29.0 285 37-332 47-353 (380)
43 1r5m_A SIR4-interacting protei 100.0 4.5E-42 1.5E-46 293.4 38.5 282 16-312 45-425 (425)
44 2pm7_B Protein transport prote 100.0 2.4E-42 8.1E-47 281.2 34.9 251 53-312 4-285 (297)
45 3v7d_B Cell division control p 100.0 2E-41 6.9E-46 292.9 39.5 294 18-332 124-442 (464)
46 3dwl_C Actin-related protein 2 100.0 2.2E-43 7.5E-48 297.2 26.3 283 16-310 11-377 (377)
47 1erj_A Transcriptional repress 100.0 1E-41 3.5E-46 288.2 36.3 284 34-332 38-361 (393)
48 3odt_A Protein DOA1; ubiquitin 100.0 5.4E-41 1.8E-45 275.2 38.5 279 14-317 16-301 (313)
49 2pm9_A Protein WEB1, protein t 100.0 2.3E-42 8E-47 294.6 31.1 288 14-313 65-415 (416)
50 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-42 3.8E-47 301.8 29.3 268 33-314 180-519 (524)
51 2xzm_R RACK1; ribosome, transl 100.0 3.6E-41 1.2E-45 279.9 37.3 269 50-332 13-318 (343)
52 1gxr_A ESG1, transducin-like e 100.0 2.2E-41 7.6E-46 280.3 35.7 299 16-332 9-315 (337)
53 3vl1_A 26S proteasome regulato 100.0 1.8E-41 6.2E-46 289.5 35.8 297 20-331 60-393 (420)
54 2hes_X YDR267CP; beta-propelle 100.0 1E-41 3.4E-46 281.6 33.0 269 51-332 7-304 (330)
55 3frx_A Guanine nucleotide-bind 100.0 8.7E-41 3E-45 274.6 37.7 248 50-313 9-268 (319)
56 3bg1_A Protein SEC13 homolog; 100.0 1.5E-42 5.1E-47 284.8 27.0 251 54-312 9-293 (316)
57 3dw8_B Serine/threonine-protei 100.0 3.3E-40 1.1E-44 284.0 36.9 287 12-311 24-445 (447)
58 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-40 5.9E-45 284.7 34.8 276 16-318 133-420 (435)
59 3gre_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 289.1 30.4 279 15-309 62-437 (437)
60 3vl1_A 26S proteasome regulato 100.0 6E-40 2.1E-44 280.1 37.3 276 23-313 104-420 (420)
61 1pgu_A Actin interacting prote 100.0 1.7E-40 5.8E-45 296.8 35.0 309 3-331 5-347 (615)
62 3sfz_A APAF-1, apoptotic pepti 100.0 5.7E-40 1.9E-44 315.0 40.5 310 15-331 614-1052(1249)
63 4a11_B DNA excision repair pro 100.0 1.2E-39 4E-44 277.0 37.4 292 15-317 42-370 (408)
64 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.9E-39 1.3E-43 277.1 39.5 287 18-332 121-416 (445)
65 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-40 4.2E-45 282.7 29.3 285 16-313 34-343 (402)
66 3mkq_A Coatomer beta'-subunit; 100.0 2.5E-39 8.6E-44 298.3 39.3 286 14-314 11-304 (814)
67 3zwl_B Eukaryotic translation 100.0 4.2E-39 1.4E-43 269.9 37.2 275 45-332 19-324 (369)
68 1pgu_A Actin interacting prote 100.0 3.7E-39 1.3E-43 288.1 38.7 307 15-332 62-593 (615)
69 4h5i_A Guanine nucleotide-exch 100.0 1.7E-40 6E-45 277.6 28.2 282 16-313 14-344 (365)
70 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-39 7.7E-44 269.3 34.5 255 54-316 7-341 (351)
71 1sq9_A Antiviral protein SKI8; 100.0 4.6E-40 1.6E-44 278.7 30.8 269 51-332 9-363 (397)
72 1yfq_A Cell cycle arrest prote 100.0 4.1E-39 1.4E-43 267.5 35.0 278 14-310 9-322 (342)
73 1k8k_C P40, ARP2/3 complex 41 100.0 1.9E-39 6.6E-44 272.4 33.3 246 56-312 6-274 (372)
74 2xyi_A Probable histone-bindin 100.0 2.7E-39 9.3E-44 276.6 33.7 253 52-313 122-411 (430)
75 2pm7_B Protein transport prote 100.0 5E-39 1.7E-43 261.6 33.5 247 15-269 8-284 (297)
76 3ei3_B DNA damage-binding prot 100.0 2.4E-39 8.2E-44 273.1 32.6 265 51-331 66-360 (383)
77 3dwl_C Actin-related protein 2 100.0 4.7E-41 1.6E-45 282.9 21.9 244 57-311 10-280 (377)
78 3bg1_A Protein SEC13 homolog; 100.0 5.1E-40 1.8E-44 269.7 27.4 250 12-269 9-292 (316)
79 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-39 5.3E-44 299.6 33.4 269 51-331 6-278 (814)
80 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-39 3.7E-44 301.0 31.9 288 15-314 57-521 (902)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.7E-38 1.3E-42 271.0 39.5 274 15-314 158-444 (445)
82 3jrp_A Fusion protein of prote 100.0 3.5E-39 1.2E-43 271.4 31.8 249 53-312 6-287 (379)
83 4aow_A Guanine nucleotide-bind 100.0 1.7E-38 5.8E-43 263.4 35.4 282 37-332 17-315 (340)
84 3sfz_A APAF-1, apoptotic pepti 100.0 1.1E-38 3.7E-43 306.1 37.7 305 15-332 656-1136(1249)
85 3odt_A Protein DOA1; ubiquitin 100.0 6.8E-39 2.3E-43 262.7 30.9 262 50-332 10-275 (313)
86 1r5m_A SIR4-interacting protei 100.0 4.4E-39 1.5E-43 274.8 30.0 264 36-314 25-363 (425)
87 3dw8_B Serine/threonine-protei 100.0 2.6E-39 8.9E-44 278.3 28.6 247 56-315 26-376 (447)
88 3i2n_A WD repeat-containing pr 100.0 5.4E-39 1.8E-43 268.2 28.6 253 53-316 13-295 (357)
89 3dm0_A Maltose-binding peripla 100.0 2E-38 6.8E-43 287.0 34.0 252 52-315 376-635 (694)
90 2oaj_A Protein SNI1; WD40 repe 100.0 4.7E-38 1.6E-42 290.2 36.9 305 15-332 16-497 (902)
91 3mmy_A MRNA export factor; mRN 100.0 4.5E-38 1.6E-42 263.5 33.0 288 14-316 37-350 (368)
92 1yfq_A Cell cycle arrest prote 100.0 1.1E-38 3.8E-43 264.8 28.8 260 55-330 8-301 (342)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-37 7.2E-42 266.6 36.9 284 17-314 5-393 (450)
94 3k26_A Polycomb protein EED; W 100.0 6.6E-39 2.2E-43 268.5 26.4 265 55-332 15-344 (366)
95 4e54_B DNA damage-binding prot 100.0 1.1E-38 3.6E-43 273.4 26.5 262 55-329 116-405 (435)
96 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-39 6E-44 281.7 21.7 246 57-313 132-429 (524)
97 3v7d_B Cell division control p 100.0 1E-36 3.4E-41 263.5 38.9 275 14-310 160-461 (464)
98 3gre_A Serine/threonine-protei 100.0 2E-38 6.9E-43 272.1 25.3 263 40-321 47-368 (437)
99 3jro_A Fusion protein of prote 100.0 1.8E-37 6.2E-42 282.4 29.4 251 53-314 4-287 (753)
100 3jrp_A Fusion protein of prote 100.0 1.3E-36 4.4E-41 255.8 32.0 248 15-271 10-288 (379)
101 1p22_A F-BOX/WD-repeat protein 100.0 3E-36 1E-40 258.3 31.7 255 54-331 129-393 (435)
102 4aez_A CDC20, WD repeat-contai 100.0 4.6E-36 1.6E-40 254.5 31.2 267 51-332 84-358 (401)
103 1l0q_A Surface layer protein; 100.0 2.9E-35 9.8E-40 248.8 35.6 271 29-316 5-279 (391)
104 4a11_B DNA excision repair pro 100.0 1.4E-36 4.9E-41 258.0 27.2 284 34-332 21-343 (408)
105 3bws_A Protein LP49; two-domai 100.0 2.7E-35 9.2E-40 252.3 34.7 284 19-312 125-432 (433)
106 3f3f_A Nucleoporin SEH1; struc 100.0 2.2E-35 7.5E-40 245.2 32.8 252 15-276 10-343 (351)
107 2j04_A TAU60, YPL007P, hypothe 100.0 1.8E-36 6.1E-41 257.5 25.9 259 17-311 16-296 (588)
108 3mmy_A MRNA export factor; mRN 100.0 1.1E-35 3.8E-40 249.0 30.5 268 51-332 32-324 (368)
109 3jro_A Fusion protein of prote 100.0 7.4E-36 2.5E-40 271.8 31.7 248 14-270 7-285 (753)
110 3lrv_A PRE-mRNA-splicing facto 100.0 2.9E-36 1E-40 250.4 26.6 266 25-312 47-333 (343)
111 4h5i_A Guanine nucleotide-exch 100.0 2.2E-35 7.5E-40 246.7 30.1 244 15-270 72-343 (365)
112 4gq1_A NUP37; propeller, trans 100.0 3.4E-35 1.2E-39 248.2 30.5 276 27-312 31-389 (393)
113 3vu4_A KMHSV2; beta-propeller 100.0 2.1E-34 7.3E-39 240.0 34.7 282 13-317 16-341 (355)
114 2xyi_A Probable histone-bindin 100.0 3.6E-35 1.2E-39 251.1 30.7 248 13-270 125-410 (430)
115 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-35 5.5E-40 251.3 28.2 248 14-273 79-345 (402)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.3E-35 1.5E-39 252.2 30.4 239 59-310 5-337 (450)
117 2w18_A PALB2, fancn, partner a 100.0 5.3E-34 1.8E-38 228.1 30.8 291 3-310 26-355 (356)
118 4gga_A P55CDC, cell division c 100.0 1.8E-33 6.1E-38 240.0 35.2 258 60-332 107-373 (420)
119 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-34 4.3E-39 246.2 26.5 258 15-301 51-350 (588)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-34 5.9E-39 239.7 26.0 231 66-315 44-295 (343)
121 3vu4_A KMHSV2; beta-propeller 100.0 1.4E-33 4.7E-38 235.1 31.1 250 40-314 3-273 (355)
122 4ggc_A P55CDC, cell division c 100.0 6.5E-32 2.2E-36 221.7 36.5 257 61-332 28-293 (318)
123 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.4E-32 4.8E-37 233.5 28.8 300 17-332 63-406 (415)
124 3bws_A Protein LP49; two-domai 100.0 1.9E-32 6.6E-37 234.6 29.5 268 37-317 102-395 (433)
125 4gq1_A NUP37; propeller, trans 100.0 3.6E-33 1.2E-37 235.8 24.1 230 28-269 103-388 (393)
126 1l0q_A Surface layer protein; 100.0 1.7E-30 5.8E-35 219.6 37.6 281 18-314 33-344 (391)
127 3u4y_A Uncharacterized protein 100.0 4.6E-29 1.6E-33 206.0 33.9 273 29-314 13-306 (331)
128 1ri6_A Putative isomerase YBHE 100.0 1.5E-28 5.1E-33 203.7 32.2 274 28-313 6-309 (343)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-28 5.9E-33 208.4 32.9 251 26-294 143-410 (415)
130 1nir_A Nitrite reductase; hemo 100.0 2E-28 6.8E-33 214.1 34.0 291 19-319 181-521 (543)
131 1nir_A Nitrite reductase; hemo 100.0 2E-28 6.9E-33 214.1 34.0 273 29-316 152-462 (543)
132 2ojh_A Uncharacterized protein 100.0 7E-29 2.4E-33 201.3 28.2 261 33-303 19-293 (297)
133 2ecf_A Dipeptidyl peptidase IV 100.0 1.4E-28 4.7E-33 224.5 29.9 282 18-312 38-413 (741)
134 1xfd_A DIP, dipeptidyl aminope 100.0 5.7E-28 2E-32 219.9 29.4 283 18-313 18-394 (723)
135 3hfq_A Uncharacterized protein 100.0 4.2E-27 1.4E-31 195.6 31.6 274 35-318 15-323 (347)
136 3vgz_A Uncharacterized protein 100.0 1.8E-26 6.1E-31 192.1 34.4 272 18-303 42-335 (353)
137 2w18_A PALB2, fancn, partner a 100.0 1.5E-27 5E-32 191.1 25.4 186 68-268 143-355 (356)
138 1pby_B Quinohemoprotein amine 100.0 1E-26 3.5E-31 192.2 30.5 270 28-319 3-317 (337)
139 2z3z_A Dipeptidyl aminopeptida 100.0 5.7E-27 1.9E-31 212.7 30.5 282 17-314 82-437 (706)
140 2z3z_A Dipeptidyl aminopeptida 100.0 1.1E-26 3.7E-31 210.9 27.3 293 19-331 28-408 (706)
141 3scy_A Hypothetical bacterial 100.0 5.8E-25 2E-29 183.7 34.1 269 34-315 25-340 (361)
142 1ri6_A Putative isomerase YBHE 100.0 3.8E-25 1.3E-29 183.3 31.6 266 17-293 38-334 (343)
143 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-25 6E-30 204.0 27.6 243 58-312 36-367 (741)
144 1jof_A Carboxy-CIS,CIS-muconat 99.9 7.7E-24 2.6E-28 177.0 34.2 276 29-313 5-342 (365)
145 2ojh_A Uncharacterized protein 99.9 1.8E-25 6.1E-30 181.2 23.2 243 76-332 18-280 (297)
146 1k32_A Tricorn protease; prote 99.9 1.4E-24 4.9E-29 204.6 32.6 298 16-332 14-429 (1045)
147 2oit_A Nucleoporin 214KDA; NH2 99.9 9.2E-25 3.1E-29 186.1 28.4 216 5-224 25-279 (434)
148 3vgz_A Uncharacterized protein 99.9 3.4E-24 1.1E-28 178.3 31.0 243 58-316 40-307 (353)
149 3u4y_A Uncharacterized protein 99.9 3.3E-24 1.1E-28 176.9 28.4 237 65-315 4-255 (331)
150 1jmx_B Amine dehydrogenase; ox 99.9 4.7E-25 1.6E-29 183.2 23.2 238 63-317 4-330 (349)
151 1k32_A Tricorn protease; prote 99.9 2.3E-24 7.7E-29 203.3 30.2 278 16-311 203-501 (1045)
152 3hfq_A Uncharacterized protein 99.9 3E-23 1E-27 172.3 31.9 250 17-274 40-323 (347)
153 1xfd_A DIP, dipeptidyl aminope 99.9 3.1E-24 1.1E-28 195.3 26.2 271 18-300 62-428 (723)
154 1z68_A Fibroblast activation p 99.9 1.4E-24 4.9E-29 197.4 22.8 281 20-312 19-391 (719)
155 3o4h_A Acylamino-acid-releasin 99.9 1.9E-24 6.5E-29 191.8 22.4 232 58-310 21-274 (582)
156 1pby_B Quinohemoprotein amine 99.9 1.9E-23 6.5E-28 172.6 24.6 244 19-281 36-321 (337)
157 3scy_A Hypothetical bacterial 99.9 2.5E-21 8.6E-26 161.6 35.3 264 16-290 49-360 (361)
158 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-23 5E-28 178.7 21.7 217 80-314 23-280 (434)
159 3o4h_A Acylamino-acid-releasin 99.9 6.8E-23 2.3E-27 181.9 26.6 266 16-312 21-315 (582)
160 3pe7_A Oligogalacturonate lyas 99.9 1.3E-22 4.4E-27 171.1 26.6 286 18-313 37-383 (388)
161 1jmx_B Amine dehydrogenase; ox 99.9 3.7E-22 1.3E-26 165.7 28.7 236 28-280 13-335 (349)
162 4a5s_A Dipeptidyl peptidase 4 99.9 5.1E-22 1.7E-26 180.8 26.4 275 19-314 19-355 (740)
163 3fvz_A Peptidyl-glycine alpha- 99.9 1.8E-20 6.1E-25 154.3 32.3 249 58-314 23-324 (329)
164 1q7f_A NHL, brain tumor CG1071 99.9 1.5E-19 5E-24 145.9 32.2 240 56-313 27-281 (286)
165 3c5m_A Oligogalacturonate lyas 99.9 1.4E-20 4.7E-25 159.0 26.3 283 18-312 37-382 (396)
166 1z68_A Fibroblast activation p 99.9 3.6E-21 1.2E-25 175.0 22.6 284 19-314 62-445 (719)
167 3azo_A Aminopeptidase; POP fam 99.9 4.8E-20 1.6E-24 166.1 28.6 282 16-313 23-370 (662)
168 3pe7_A Oligogalacturonate lyas 99.9 2.6E-20 8.9E-25 157.0 24.4 265 41-314 15-331 (388)
169 1jof_A Carboxy-CIS,CIS-muconat 99.9 6.3E-20 2.2E-24 153.3 26.4 244 18-271 41-342 (365)
170 2oiz_A Aromatic amine dehydrog 99.9 9.1E-20 3.1E-24 151.7 26.2 265 34-313 29-335 (361)
171 2oiz_A Aromatic amine dehydrog 99.9 3.6E-19 1.2E-23 148.1 29.2 262 21-294 54-360 (361)
172 2gop_A Trilobed protease; beta 99.9 2.7E-19 9.4E-24 148.4 27.8 242 35-311 42-330 (347)
173 2dg1_A DRP35, lactonase; beta 99.9 6.5E-19 2.2E-23 145.3 29.5 264 19-302 8-300 (333)
174 2xdw_A Prolyl endopeptidase; a 99.9 2.1E-18 7.3E-23 156.4 30.8 247 57-314 123-416 (710)
175 3azo_A Aminopeptidase; POP fam 99.8 5.6E-19 1.9E-23 159.2 25.2 249 54-311 19-322 (662)
176 4a5s_A Dipeptidyl peptidase 4 99.8 6.9E-18 2.3E-22 153.7 30.4 285 22-313 67-450 (740)
177 1rwi_B Serine/threonine-protei 99.8 1.1E-17 3.8E-22 133.6 28.1 243 60-317 25-269 (270)
178 3e5z_A Putative gluconolactona 99.8 1.5E-17 5E-22 134.8 27.5 233 56-313 25-285 (296)
179 1qks_A Cytochrome CD1 nitrite 99.8 2.2E-16 7.5E-21 138.0 35.6 269 31-313 172-478 (567)
180 3dsm_A Uncharacterized protein 99.8 2.9E-17 9.9E-22 134.9 28.0 259 35-311 16-301 (328)
181 1q7f_A NHL, brain tumor CG1071 99.8 8.2E-17 2.8E-21 129.7 30.2 236 18-273 31-283 (286)
182 3c5m_A Oligogalacturonate lyas 99.8 1.2E-18 4E-23 147.1 20.0 263 40-315 14-332 (396)
183 2z2n_A Virginiamycin B lyase; 99.8 2E-15 6.8E-20 122.3 38.2 275 17-313 15-296 (299)
184 2bkl_A Prolyl endopeptidase; m 99.8 5.5E-18 1.9E-22 153.3 25.3 277 24-314 77-399 (695)
185 3no2_A Uncharacterized protein 99.8 4.6E-17 1.6E-21 130.0 27.6 213 69-300 4-231 (276)
186 1qks_A Cytochrome CD1 nitrite 99.8 2.7E-16 9.1E-21 137.4 34.0 292 19-317 199-543 (567)
187 3fvz_A Peptidyl-glycine alpha- 99.8 2.8E-16 9.6E-21 129.2 31.1 239 18-270 25-322 (329)
188 2dg1_A DRP35, lactonase; beta 99.8 5.3E-17 1.8E-21 133.8 22.9 240 59-311 6-262 (333)
189 2qc5_A Streptogramin B lactona 99.8 3.3E-14 1.1E-18 115.1 37.6 273 17-310 20-298 (300)
190 3e5z_A Putative gluconolactona 99.8 9.3E-16 3.2E-20 124.2 28.0 236 17-273 28-289 (296)
191 2xdw_A Prolyl endopeptidase; a 99.8 1.4E-15 4.7E-20 138.0 32.1 245 17-272 125-416 (710)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 1.7E-15 5.9E-20 123.6 29.2 239 58-313 17-300 (314)
193 2gop_A Trilobed protease; beta 99.8 7.5E-16 2.6E-20 127.6 26.6 231 18-282 60-341 (347)
194 2z2n_A Virginiamycin B lyase; 99.8 2.5E-14 8.7E-19 115.7 33.3 243 52-311 8-254 (299)
195 2mad_H Methylamine dehydrogena 99.8 3E-14 1E-18 118.6 34.0 266 37-318 48-356 (373)
196 1rwi_B Serine/threonine-protei 99.7 4.1E-15 1.4E-19 118.7 27.2 239 18-273 25-267 (270)
197 1yr2_A Prolyl oligopeptidase; 99.7 2E-15 6.9E-20 137.5 28.2 246 57-314 161-443 (741)
198 3no2_A Uncharacterized protein 99.7 1E-14 3.4E-19 116.4 27.9 212 25-251 3-230 (276)
199 3dsm_A Uncharacterized protein 99.7 1.1E-14 3.7E-19 119.6 27.1 227 78-316 15-257 (328)
200 2bkl_A Prolyl endopeptidase; m 99.7 2.9E-15 1E-19 135.5 24.9 244 17-273 121-400 (695)
201 2qc5_A Streptogramin B lactona 99.7 3.5E-13 1.2E-17 109.0 34.9 242 52-311 13-259 (300)
202 3sjl_D Methylamine dehydrogena 99.7 3.3E-14 1.1E-18 117.0 27.9 278 26-317 44-368 (386)
203 3hrp_A Uncharacterized protein 99.7 6E-14 2.1E-18 118.4 30.1 238 59-311 131-409 (409)
204 3sjl_D Methylamine dehydrogena 99.7 4.9E-14 1.7E-18 116.0 27.9 259 22-292 83-384 (386)
205 1yr2_A Prolyl oligopeptidase; 99.7 1.4E-14 4.8E-19 132.0 25.9 244 17-273 163-444 (741)
206 2mad_H Methylamine dehydrogena 99.7 8.4E-13 2.9E-17 109.9 33.8 245 21-277 70-357 (373)
207 3c75_H MADH, methylamine dehyd 99.7 8E-14 2.7E-18 116.8 27.2 280 25-318 83-408 (426)
208 3g4e_A Regucalcin; six bladed 99.7 4.7E-13 1.6E-17 108.3 29.0 226 58-300 12-260 (297)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.8E-13 2E-17 108.6 29.2 238 19-270 20-299 (314)
210 1xip_A Nucleoporin NUP159; bet 99.7 4.9E-15 1.7E-19 122.4 16.3 175 18-208 39-232 (388)
211 3iuj_A Prolyl endopeptidase; h 99.6 6.7E-14 2.3E-18 126.4 24.0 245 56-314 126-407 (693)
212 1xip_A Nucleoporin NUP159; bet 99.6 2.4E-14 8.1E-19 118.3 17.6 173 102-299 39-231 (388)
213 2ghs_A AGR_C_1268P; regucalcin 99.6 2E-12 6.9E-17 105.9 28.3 220 61-301 51-291 (326)
214 3c75_H MADH, methylamine dehyd 99.6 5.5E-13 1.9E-17 111.7 24.3 247 21-277 122-409 (426)
215 3g4e_A Regucalcin; six bladed 99.6 6.1E-12 2.1E-16 101.7 28.2 222 19-251 15-259 (297)
216 3dr2_A Exported gluconolactona 99.6 2.2E-12 7.4E-17 104.8 24.6 227 57-305 43-300 (305)
217 3hrp_A Uncharacterized protein 99.6 8.8E-12 3E-16 105.2 28.8 232 18-268 132-408 (409)
218 1mda_H Methylamine dehydrogena 99.6 6.9E-12 2.3E-16 103.4 25.7 251 25-291 30-366 (368)
219 1kb0_A Quinohemoprotein alcoho 99.6 6.6E-12 2.2E-16 112.6 27.6 283 21-312 123-567 (677)
220 2ece_A 462AA long hypothetical 99.5 3E-11 1E-15 100.2 29.1 254 37-300 44-399 (462)
221 1npe_A Nidogen, entactin; glyc 99.5 9.4E-11 3.2E-15 93.2 30.5 250 30-294 4-263 (267)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.5 4.7E-11 1.6E-15 99.9 29.5 263 21-309 98-375 (376)
223 1kb0_A Quinohemoprotein alcoho 99.5 6.5E-12 2.2E-16 112.7 25.6 286 26-319 77-514 (677)
224 1yiq_A Quinohemoprotein alcoho 99.5 1.1E-11 3.9E-16 111.3 26.9 268 22-297 117-533 (689)
225 2qe8_A Uncharacterized protein 99.5 2.4E-12 8.2E-17 106.3 20.9 266 18-309 18-318 (343)
226 2ghs_A AGR_C_1268P; regucalcin 99.5 1.1E-10 3.6E-15 95.7 29.9 218 19-251 51-289 (326)
227 2hz6_A Endoplasmic reticulum t 99.5 1.9E-15 6.6E-20 125.9 1.6 262 25-312 8-279 (369)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.5 9.1E-11 3.1E-15 98.2 29.6 265 25-316 52-341 (376)
229 3dr2_A Exported gluconolactona 99.5 6E-11 2.1E-15 96.2 26.7 217 19-251 47-294 (305)
230 3iuj_A Prolyl endopeptidase; h 99.5 2.2E-11 7.5E-16 110.0 25.3 243 17-273 129-408 (693)
231 1yiq_A Quinohemoprotein alcoho 99.5 4.6E-11 1.6E-15 107.4 25.7 288 26-319 70-512 (689)
232 2ece_A 462AA long hypothetical 99.4 1.8E-10 6.2E-15 95.6 25.2 220 27-252 96-399 (462)
233 3hxj_A Pyrrolo-quinoline quino 99.4 1.1E-10 3.8E-15 95.7 23.5 264 20-315 63-327 (330)
234 1fwx_A Nitrous oxide reductase 99.4 3E-11 1E-15 103.8 19.6 266 16-314 86-433 (595)
235 2hz6_A Endoplasmic reticulum t 99.4 2.9E-13 9.8E-18 112.8 5.9 204 69-294 8-216 (369)
236 1mda_H Methylamine dehydrogena 99.4 5.6E-11 1.9E-15 98.0 17.9 224 81-318 47-352 (368)
237 1kv9_A Type II quinohemoprotei 99.3 3.1E-09 1.1E-13 95.3 28.9 284 22-313 113-553 (668)
238 2qe8_A Uncharacterized protein 99.3 1.5E-09 5E-14 89.6 23.7 216 17-251 67-308 (343)
239 2fp8_A Strictosidine synthase; 99.3 3.3E-09 1.1E-13 86.6 25.5 249 53-313 13-314 (322)
240 3hxj_A Pyrrolo-quinoline quino 99.3 1.8E-10 6.3E-15 94.4 16.8 253 25-310 29-282 (330)
241 1npe_A Nidogen, entactin; glyc 99.3 3.3E-08 1.1E-12 78.4 28.6 233 71-316 2-242 (267)
242 1kv9_A Type II quinohemoprotei 99.3 4.1E-09 1.4E-13 94.5 25.2 285 25-318 65-494 (668)
243 2p4o_A Hypothetical protein; p 99.3 1.1E-07 3.7E-12 77.0 31.3 229 59-303 32-279 (306)
244 2ad6_A Methanol dehydrogenase 99.2 2.3E-08 7.9E-13 87.9 28.9 282 26-317 62-499 (571)
245 3v64_C Agrin; beta propeller, 99.2 4.6E-07 1.6E-11 74.7 34.5 243 20-278 37-283 (349)
246 2iwa_A Glutamine cyclotransfer 99.2 1.4E-08 4.9E-13 79.3 23.5 207 90-314 9-239 (266)
247 2iwa_A Glutamine cyclotransfer 99.2 2E-08 6.9E-13 78.4 24.3 198 18-224 22-238 (266)
248 3v65_B Low-density lipoprotein 99.2 2.1E-07 7.3E-12 77.8 32.3 253 21-289 81-337 (386)
249 2ad6_A Methanol dehydrogenase 99.2 5.4E-08 1.9E-12 85.6 29.5 265 22-297 111-522 (571)
250 1w6s_A Methanol dehydrogenase 99.2 7.7E-08 2.6E-12 84.7 29.7 285 26-318 62-509 (599)
251 1ijq_A LDL receptor, low-densi 99.2 7.2E-07 2.5E-11 72.4 34.1 233 29-277 3-245 (316)
252 3p5b_L Low density lipoprotein 99.2 1.4E-06 4.7E-11 73.2 34.4 249 24-288 80-338 (400)
253 4a2l_A BT_4663, two-component 99.1 1.2E-06 4E-11 80.7 36.4 275 19-313 175-481 (795)
254 3v64_C Agrin; beta propeller, 99.1 6.8E-07 2.3E-11 73.6 31.5 240 61-315 36-278 (349)
255 1flg_A Protein (quinoprotein e 99.1 1.5E-07 5.1E-12 82.9 29.1 286 25-318 67-522 (582)
256 1flg_A Protein (quinoprotein e 99.1 3.1E-07 1.1E-11 80.9 30.6 268 22-297 113-544 (582)
257 3mbr_X Glutamine cyclotransfer 99.1 6.8E-08 2.3E-12 73.9 22.7 185 16-208 20-222 (243)
258 1w6s_A Methanol dehydrogenase 99.1 5.3E-07 1.8E-11 79.4 31.4 260 29-298 124-533 (599)
259 4a2l_A BT_4663, two-component 99.1 1.8E-06 6.1E-11 79.4 36.0 273 17-312 310-614 (795)
260 3v65_B Low-density lipoprotein 99.1 6.2E-07 2.1E-11 75.0 29.7 240 62-316 80-322 (386)
261 3nok_A Glutaminyl cyclase; bet 99.1 4.1E-08 1.4E-12 75.8 20.5 183 17-208 55-253 (268)
262 3nol_A Glutamine cyclotransfer 99.1 8E-08 2.8E-12 74.2 21.5 184 17-208 43-243 (262)
263 1fwx_A Nitrous oxide reductase 99.1 3.7E-08 1.3E-12 84.8 21.3 191 112-312 100-361 (595)
264 3v9f_A Two-component system se 99.0 3.2E-06 1.1E-10 77.6 34.3 275 18-312 212-524 (781)
265 3qqz_A Putative uncharacterize 99.0 2.4E-06 8.3E-11 66.3 28.6 204 53-268 21-251 (255)
266 3nol_A Glutamine cyclotransfer 99.0 1.8E-07 6.2E-12 72.2 21.8 179 61-251 45-242 (262)
267 3sov_A LRP-6, low-density lipo 99.0 1.8E-06 6.2E-11 70.0 28.5 238 27-278 4-246 (318)
268 3nok_A Glutaminyl cyclase; bet 99.0 1.4E-07 4.9E-12 72.8 20.1 177 61-250 57-251 (268)
269 1ijq_A LDL receptor, low-densi 99.0 5.9E-06 2E-10 67.1 30.8 232 72-316 3-242 (316)
270 2fp8_A Strictosidine synthase; 99.0 2.8E-06 9.4E-11 69.2 28.3 239 19-270 21-313 (322)
271 3mbr_X Glutamine cyclotransfer 99.0 1.6E-06 5.6E-11 66.3 24.8 191 91-301 10-223 (243)
272 3sov_A LRP-6, low-density lipo 99.0 2.9E-06 9.8E-11 68.8 27.8 234 72-316 6-242 (318)
273 4a0p_A LRP6, LRP-6, low-densit 99.0 1.5E-05 5.1E-10 70.8 34.3 232 27-273 6-240 (628)
274 3p5b_L Low density lipoprotein 98.9 1.2E-05 4E-10 67.6 30.9 234 72-317 85-325 (400)
275 3m0c_C LDL receptor, low-densi 98.9 1.4E-05 4.8E-10 72.7 33.2 239 23-277 391-639 (791)
276 2xe4_A Oligopeptidase B; hydro 98.9 1.8E-06 6.3E-11 78.6 27.8 197 60-268 175-398 (751)
277 1k3i_A Galactose oxidase precu 98.9 3.7E-07 1.3E-11 82.0 23.0 262 37-301 220-530 (656)
278 3v9f_A Two-component system se 98.9 8E-06 2.7E-10 75.0 32.2 275 17-313 258-569 (781)
279 3tc9_A Hypothetical hydrolase; 98.9 3E-06 1E-10 71.8 26.8 152 18-175 138-301 (430)
280 3tc9_A Hypothetical hydrolase; 98.9 4.1E-06 1.4E-10 71.1 27.3 238 60-311 138-429 (430)
281 4hw6_A Hypothetical protein, I 98.9 3.4E-06 1.2E-10 71.5 26.7 239 59-311 139-432 (433)
282 2xzh_A Clathrin heavy chain 1; 98.9 1.2E-05 4.1E-10 63.7 32.9 279 16-314 25-334 (365)
283 2p4o_A Hypothetical protein; p 98.9 8.2E-06 2.8E-10 65.9 27.2 222 18-251 33-275 (306)
284 4hw6_A Hypothetical protein, I 98.9 9E-06 3.1E-10 68.9 27.7 199 19-226 141-376 (433)
285 1n7d_A LDL receptor, low-densi 98.9 1.5E-07 5E-12 84.8 17.5 248 27-290 377-634 (699)
286 2xe4_A Oligopeptidase B; hydro 98.8 9.4E-07 3.2E-11 80.6 21.9 243 18-273 175-461 (751)
287 2xbg_A YCF48-like protein; pho 98.8 3.6E-05 1.2E-09 62.8 32.4 270 16-310 35-320 (327)
288 1k3i_A Galactose oxidase precu 98.8 3.4E-06 1.2E-10 75.7 23.4 245 62-313 189-498 (656)
289 3qqz_A Putative uncharacterize 98.8 3E-05 1E-09 60.2 27.7 204 95-308 21-249 (255)
290 3kya_A Putative phosphatase; s 98.7 2.5E-05 8.5E-10 66.6 26.8 244 61-317 141-480 (496)
291 4a0p_A LRP6, LRP-6, low-densit 98.7 6.5E-05 2.2E-09 66.8 30.6 232 72-316 8-241 (628)
292 1bpo_A Protein (clathrin); cla 98.7 6.2E-05 2.1E-09 62.1 34.3 278 17-314 25-333 (494)
293 3m0c_C LDL receptor, low-densi 98.7 0.0001 3.4E-09 67.1 30.7 233 72-316 397-636 (791)
294 3s94_A LRP-6, low-density lipo 98.6 0.00012 4.3E-09 64.9 28.8 232 28-273 10-246 (619)
295 3amr_A 3-phytase; beta-propell 98.6 3.2E-05 1.1E-09 62.4 22.4 197 69-277 39-271 (355)
296 2xbg_A YCF48-like protein; pho 98.6 0.00011 3.9E-09 59.8 26.0 234 16-268 79-320 (327)
297 3s94_A LRP-6, low-density lipo 98.6 0.00012 4E-09 65.1 27.4 228 79-316 17-247 (619)
298 3amr_A 3-phytase; beta-propell 98.5 8.5E-05 2.9E-09 60.0 22.9 187 112-312 39-263 (355)
299 1n7d_A LDL receptor, low-densi 98.5 1.6E-06 5.4E-11 78.1 14.1 225 79-314 385-616 (699)
300 2p9w_A MAL S 1 allergenic prot 98.5 9.9E-05 3.4E-09 59.0 22.1 203 15-223 11-265 (334)
301 3kya_A Putative phosphatase; s 98.5 0.00043 1.5E-08 59.1 28.9 155 19-174 141-340 (496)
302 2ism_A Putative oxidoreductase 98.5 0.00028 9.7E-09 58.0 24.7 226 59-300 31-333 (352)
303 2p9w_A MAL S 1 allergenic prot 98.3 0.00042 1.4E-08 55.5 20.8 168 52-224 6-216 (334)
304 1xi4_A Clathrin heavy chain; a 98.3 0.00031 1.1E-08 66.6 22.3 280 16-315 24-334 (1630)
305 3sre_A PON1, serum paraoxonase 98.2 0.00045 1.5E-08 56.5 20.8 184 60-251 51-284 (355)
306 3a9g_A Putative uncharacterize 98.1 0.0022 7.6E-08 52.7 27.2 229 59-300 29-330 (354)
307 2vpj_A Kelch-like protein 12; 98.1 0.0014 4.8E-08 52.5 21.4 232 69-313 14-279 (301)
308 2ism_A Putative oxidoreductase 98.1 0.0025 8.5E-08 52.4 24.9 224 19-251 33-332 (352)
309 3pbp_A Nucleoporin NUP82; beta 98.1 0.0011 3.6E-08 54.9 19.9 146 25-171 30-208 (452)
310 3ii7_A Kelch-like protein 7; p 98.0 0.0033 1.1E-07 50.5 21.5 224 35-272 23-274 (306)
311 2g8s_A Glucose/sorbosone dehyd 98.0 0.0043 1.5E-07 51.0 25.6 240 60-311 19-351 (353)
312 2vpj_A Kelch-like protein 12; 98.0 0.0036 1.2E-07 50.1 22.2 182 36-227 31-235 (301)
313 2xn4_A Kelch-like protein 2; s 97.9 0.0046 1.6E-07 49.5 21.3 180 36-227 30-233 (302)
314 2xn4_A Kelch-like protein 2; s 97.9 0.0049 1.7E-07 49.3 21.3 231 70-313 16-277 (302)
315 1zgk_A Kelch-like ECH-associat 97.9 0.0033 1.1E-07 50.5 19.9 179 36-227 39-244 (308)
316 2uvk_A YJHT; unknown function, 97.9 0.0072 2.5E-07 49.7 21.7 92 26-122 19-128 (357)
317 2xzh_A Clathrin heavy chain 1; 97.8 0.0084 2.9E-07 47.8 26.1 197 25-232 75-299 (365)
318 3ii7_A Kelch-like protein 7; p 97.8 0.0089 3.1E-07 47.9 22.0 230 71-313 13-273 (306)
319 3ei3_A DNA damage-binding prot 97.8 0.03 1E-06 53.5 38.6 285 16-312 513-873 (1158)
320 3pbp_A Nucleoporin NUP82; beta 97.7 0.012 4.2E-07 48.7 19.9 150 65-219 27-208 (452)
321 4asc_A Kelch repeat and BTB do 97.7 0.013 4.5E-07 47.2 21.9 186 29-227 7-225 (315)
322 3sre_A PON1, serum paraoxonase 97.6 0.018 6.3E-07 47.0 23.2 173 121-302 81-287 (355)
323 1zgk_A Kelch-like ECH-associat 97.6 0.017 5.9E-07 46.3 21.1 180 36-226 90-290 (308)
324 2zwa_A Leucine carboxyl methyl 97.5 0.042 1.4E-06 49.6 22.6 187 36-227 412-639 (695)
325 3a9g_A Putative uncharacterize 97.5 0.031 1.1E-06 45.9 22.7 202 101-312 29-296 (354)
326 1bpo_A Protein (clathrin); cla 97.4 0.04 1.4E-06 45.9 29.0 229 28-273 78-334 (494)
327 4asc_A Kelch repeat and BTB do 97.4 0.025 8.6E-07 45.5 18.1 176 38-226 69-280 (315)
328 3das_A Putative oxidoreductase 97.4 0.038 1.3E-06 45.0 29.0 232 58-300 31-326 (347)
329 1cru_A Protein (soluble quinop 97.4 0.052 1.8E-06 46.2 28.5 105 59-163 27-162 (454)
330 2be1_A Serine/threonine-protei 97.3 0.016 5.4E-07 47.0 15.9 203 27-236 11-245 (339)
331 2woz_A Kelch repeat and BTB do 97.2 0.061 2.1E-06 43.3 19.5 228 72-313 18-288 (318)
332 2be1_A Serine/threonine-protei 97.2 0.031 1E-06 45.3 15.7 108 71-178 11-133 (339)
333 1tl2_A L10, protein (tachylect 97.1 0.012 4.1E-07 44.1 11.7 104 59-170 41-158 (236)
334 3ei3_A DNA damage-binding prot 97.0 0.24 8.3E-06 47.4 35.0 249 35-301 491-756 (1158)
335 2woz_A Kelch repeat and BTB do 97.0 0.094 3.2E-06 42.2 22.2 188 28-227 17-235 (318)
336 3s25_A Hypothetical 7-bladed b 97.0 0.092 3.2E-06 41.9 20.9 214 67-314 22-257 (302)
337 3ott_A Two-component system se 96.9 0.23 8E-06 45.3 33.4 269 18-311 147-447 (758)
338 1xi4_A Clathrin heavy chain; a 96.9 0.12 4.1E-06 49.8 19.0 193 28-231 78-297 (1630)
339 2zwa_A Leucine carboxyl methyl 96.7 0.29 1E-05 44.2 19.8 203 68-273 396-638 (695)
340 3ott_A Two-component system se 96.7 0.35 1.2E-05 44.2 31.8 266 17-311 63-351 (758)
341 2uvk_A YJHT; unknown function, 96.6 0.22 7.6E-06 40.7 19.0 188 36-230 86-349 (357)
342 3s25_A Hypothetical 7-bladed b 96.6 0.2 6.9E-06 40.0 27.6 251 22-312 21-293 (302)
343 1tl2_A L10, protein (tachylect 96.3 0.23 8E-06 37.3 14.0 146 18-174 42-207 (236)
344 3das_A Putative oxidoreductase 95.9 0.53 1.8E-05 38.3 24.2 156 95-251 26-219 (347)
345 3sbq_A Nitrous-oxide reductase 95.8 0.83 2.9E-05 39.5 26.6 231 29-270 73-408 (638)
346 3sbq_A Nitrous-oxide reductase 95.7 0.92 3.2E-05 39.3 24.7 231 16-253 127-454 (638)
347 3qhy_B Beta-lactamase inhibito 95.5 0.68 2.3E-05 36.5 19.8 223 60-314 25-248 (282)
348 1cru_A Protein (soluble quinop 95.5 1 3.5E-05 38.3 22.3 107 101-208 27-162 (454)
349 2g8s_A Glucose/sorbosone dehyd 95.3 1 3.4E-05 36.8 27.4 225 18-250 19-339 (353)
350 2wg3_C Hedgehog-interacting pr 95.2 1.3 4.3E-05 37.8 23.8 106 60-165 15-159 (463)
351 4gq2_M Nucleoporin NUP120; bet 93.2 3.8 0.00013 38.6 15.7 38 60-97 237-274 (950)
352 3b7f_A Glycosyl hydrolase, BNR 92.9 3.4 0.00012 34.1 27.9 208 27-244 23-288 (394)
353 3qhy_B Beta-lactamase inhibito 92.1 3.5 0.00012 32.4 22.3 239 18-292 25-264 (282)
354 4gq2_M Nucleoporin NUP120; bet 91.7 7.5 0.00026 36.6 15.7 38 191-231 237-274 (950)
355 2wg3_C Hedgehog-interacting pr 90.8 6.9 0.00024 33.3 13.7 108 101-209 14-158 (463)
356 4fhn_B Nucleoporin NUP120; pro 89.1 3 0.0001 40.2 10.8 38 60-97 239-276 (1139)
357 3f7f_A Nucleoporin NUP120; nuc 87.4 5.3 0.00018 35.9 10.4 81 16-98 161-259 (729)
358 3kci_A Probable E3 ubiquitin-p 87.2 11 0.00039 31.0 28.3 270 25-312 9-345 (389)
359 3no0_A DNA gyrase subunit A; D 86.4 10 0.00035 29.6 20.0 143 26-175 35-196 (276)
360 1suu_A DNA gyrase subunit A; t 83.7 15 0.00051 29.3 27.6 231 68-312 6-283 (312)
361 3kci_A Probable E3 ubiquitin-p 82.4 19 0.00066 29.6 28.7 196 18-221 54-291 (389)
362 3b7f_A Glycosyl hydrolase, BNR 80.3 23 0.00079 29.1 26.2 174 70-251 22-250 (394)
363 3q6k_A 43.2 kDa salivary prote 78.5 27 0.00091 28.8 24.5 159 37-223 124-306 (381)
364 4hvt_A Ritya.17583.B, post-pro 77.7 41 0.0014 30.5 23.3 221 37-269 157-429 (711)
365 4fhn_B Nucleoporin NUP120; pro 77.5 8.7 0.0003 37.0 8.6 39 191-232 239-277 (1139)
366 3uc1_A DNA gyrase subunit A; D 77.2 27 0.00091 28.1 21.6 158 15-175 41-228 (327)
367 4hvt_A Ritya.17583.B, post-pro 76.9 43 0.0015 30.3 22.2 239 61-311 131-429 (711)
368 3no0_A DNA gyrase subunit A; D 75.9 26 0.00089 27.3 22.7 158 144-312 67-246 (276)
369 3f7f_A Nucleoporin NUP120; nuc 75.5 22 0.00076 32.0 9.8 40 15-54 220-259 (729)
370 1suu_A DNA gyrase subunit A; t 72.6 34 0.0012 27.2 23.5 190 112-313 7-232 (312)
371 1zi0_A DNA gyrase subunit A; b 72.5 34 0.0012 27.1 27.5 234 68-313 1-278 (307)
372 4a9v_A PHOX; hydrolase, beta-p 72.0 21 0.00071 31.3 8.6 66 235-300 477-549 (592)
373 3uc1_A DNA gyrase subunit A; D 71.9 37 0.0013 27.2 25.5 230 71-312 4-279 (327)
374 4d9s_A UVB-resistance protein 71.5 42 0.0014 27.8 34.4 274 17-312 16-357 (406)
375 3zwu_A Alkaline phosphatase PH 70.8 17 0.00057 32.0 8.0 64 236-299 478-548 (592)
376 1wp5_A Topoisomerase IV; broke 69.4 42 0.0014 26.9 24.4 148 25-175 49-225 (323)
377 4a9v_A PHOX; hydrolase, beta-p 69.2 27 0.00094 30.5 8.7 62 190-251 476-548 (592)
378 1a12_A RCC1, regulator of chro 67.0 53 0.0018 27.2 26.6 190 17-221 59-312 (413)
379 1zi0_A DNA gyrase subunit A; b 65.8 48 0.0016 26.2 22.1 189 112-312 2-226 (307)
380 4d9s_A UVB-resistance protein 62.6 65 0.0022 26.6 24.8 193 17-221 121-355 (406)
381 1sqj_A OXG-RCBH, oligoxylogluc 62.3 96 0.0033 28.5 18.7 147 16-165 14-190 (789)
382 3l6v_A GYRA, DNA gyrase subuni 60.3 69 0.0024 26.2 24.0 193 109-313 4-266 (370)
383 3of7_A Regulator of chromosome 60.0 80 0.0027 26.8 23.8 152 16-174 147-340 (473)
384 3zwu_A Alkaline phosphatase PH 58.1 31 0.0011 30.4 7.2 55 22-77 481-549 (592)
385 1wp5_A Topoisomerase IV; broke 57.4 72 0.0025 25.5 25.0 234 68-313 3-278 (323)
386 3l6v_A GYRA, DNA gyrase subuni 53.8 90 0.0031 25.5 27.1 150 67-222 4-179 (370)
387 1sqj_A OXG-RCBH, oligoxylogluc 53.7 1.4E+02 0.0046 27.5 24.9 149 58-208 14-188 (789)
388 3mvd_K Regulator of chromosome 51.7 1E+02 0.0035 25.5 35.0 148 18-174 25-206 (423)
389 2cn3_A Xyloglucanase, beta-1,4 50.6 1.5E+02 0.005 27.0 24.4 105 60-165 24-153 (737)
390 3q6k_A 43.2 kDa salivary prote 49.0 1.1E+02 0.0038 25.1 22.2 169 124-300 124-342 (381)
391 1q47_A Semaphorin 3A; beta pro 48.7 66 0.0022 27.6 7.6 56 29-84 424-487 (495)
392 3al9_A Plexin-A2; beta-propell 47.1 49 0.0017 28.8 6.7 56 29-84 416-476 (539)
393 4gz8_A Semaphorin-3A; multi-do 40.9 1.4E+02 0.0048 26.8 8.7 56 29-84 432-495 (667)
394 3mvd_K Regulator of chromosome 40.3 1.6E+02 0.0054 24.4 27.8 190 19-221 77-320 (423)
395 1q47_A Semaphorin 3A; beta pro 35.7 1.4E+02 0.0047 25.6 7.6 57 114-170 422-487 (495)
396 3nvq_A Semaphorin-7A; beta-pro 35.5 1.5E+02 0.0051 26.2 7.8 57 29-85 383-445 (590)
397 1olz_A Semaphorin 4D; developm 28.9 2.2E+02 0.0075 25.6 8.0 57 114-170 416-477 (663)
398 3ol2_B Plexin-B1; beta-propell 27.2 1.7E+02 0.0057 25.4 6.7 56 29-85 403-462 (528)
399 3al9_A Plexin-A2; beta-propell 26.2 1.4E+02 0.0049 25.9 6.2 58 113-170 413-476 (539)
400 1olz_A Semaphorin 4D; developm 25.6 3.7E+02 0.013 24.1 8.9 56 29-84 418-477 (663)
401 3of7_A Regulator of chromosome 25.5 3E+02 0.01 23.2 28.5 153 15-174 65-284 (473)
402 2cn3_A Xyloglucanase, beta-1,4 25.4 3.8E+02 0.013 24.3 21.6 105 18-122 24-153 (737)
403 3nvq_A Semaphorin-7A; beta-pro 24.3 3.2E+02 0.011 24.1 7.9 57 114-170 381-444 (590)
404 3oky_A Plexin-A2; transmembran 22.6 2.2E+02 0.0076 25.6 6.8 57 29-85 415-476 (681)
405 4gz8_A Semaphorin-3A; multi-do 21.6 3E+02 0.01 24.8 7.4 57 114-170 430-495 (667)
No 1
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.4e-54 Score=368.94 Aligned_cols=317 Identities=45% Similarity=0.837 Sum_probs=285.0
Q ss_pred cccccccCCCCcccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcE
Q 019847 3 REARILDAPYLMEDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKL 82 (335)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 82 (335)
.|++++++|.+.+|++++.++|+++.+++++.|++|+|||..+++....+.+.+|...|++++|+|+|++|++|+.||.|
T Consensus 92 ~p~~~l~ap~~~~d~y~~~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v 171 (420)
T 4gga_A 92 LPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 171 (420)
T ss_dssp SCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCceEEECCCCcccccceeEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeE
Confidence 57899999999999999999999999999999999999999999998888888999999999999999999999999999
Q ss_pred EEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE
Q 019847 83 QLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 83 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (335)
++||+++++.+..+.+|...+.++.+ ++.+|++|+.|+.+++||..........+.+|...+..+.|+|++++++++
T Consensus 172 ~iWd~~~~~~~~~~~~h~~~v~~~s~---~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 172 QLWDVQQQKRLRNMTSHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEcCCCcEEEEEeCCCCceEEEee---CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeee
Confidence 99999999999999999999999988 568999999999999999998887788889999999999999999999999
Q ss_pred eCCCeEEEEEccCCCcc-cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEe
Q 019847 163 GDDNVVRIWERSKMSSS-KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEW 241 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 241 (335)
+.|+.+++||....... ..+.....|...|.+++|+|++..++++++|+.|+.|++||++++++...+..+..+.++.|
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~ 328 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW 328 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeee
Confidence 99999999998865432 34566678999999999999999999887777999999999999999999999999999999
Q ss_pred CCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccc
Q 019847 242 NRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVS 321 (335)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~ 321 (335)
+|++..++++. +..|+.|++||+.+++++.++.+|.+.|++++|+|||++|+||+.||+|+|||+.......+...
T Consensus 329 ~~~~~~lv~~s----g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~ 404 (420)
T 4gga_A 329 SPHYKELISGH----GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRER 404 (420)
T ss_dssp ETTTTEEEEEE----CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----
T ss_pred cCCCCeEEEEE----ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhh
Confidence 99999998763 35799999999999999999999999999999999999999999999999999988665555544
Q ss_pred ccccc
Q 019847 322 HLAGL 326 (335)
Q Consensus 322 ~~~~i 326 (335)
+....
T Consensus 405 ~~~~~ 409 (420)
T 4gga_A 405 EKASA 409 (420)
T ss_dssp -----
T ss_pred ccCCc
Confidence 44433
No 2
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-51 Score=339.20 Aligned_cols=304 Identities=47% Similarity=0.877 Sum_probs=278.2
Q ss_pred cccccccCCCCcccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcE
Q 019847 3 REARILDAPYLMEDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKL 82 (335)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 82 (335)
.|+|+|++|.+.++++.++++|+++.+++++.|++|+|||+++++..+.+.+.+|...|++++|+|++++|++|+.||.|
T Consensus 12 ~p~rvldap~~~~d~y~~~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 12 LPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV 91 (318)
T ss_dssp SCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCEEeeCCCCcccccceEEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 68999999999999999999999998999999999999999999998888888999999999999999999999999999
Q ss_pred EEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE
Q 019847 83 QLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 83 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (335)
++||+++++.+..+.+|...+.++.+ ++..+++++.++.+++|+..........+.+|...+..+.+++++++|+++
T Consensus 92 ~iw~~~~~~~~~~~~~h~~~~~~~~~---~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 168 (318)
T 4ggc_A 92 QLWDVQQQKRLRNMTSHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASG 168 (318)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEeecCCceeEEEecCccceEEEeec---CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEE
Confidence 99999999999999999998887766 568999999999999999998888788889999999999999999999999
Q ss_pred eCCCeEEEEEccCCCcc-cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEe
Q 019847 163 GDDNVVRIWERSKMSSS-KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEW 241 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 241 (335)
+.||.|++||+++.+.. ........+.+.|.++.++|++..++..++++.++.|++||.+.............+..+.|
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~ 248 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILW 248 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeee
Confidence 99999999999875432 23445566888999999999998888776667899999999999999988888999999999
Q ss_pred CCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 242 NRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
+|.+..++++. ++.|+.|++||+++++++.++.+|.+.|++++|+|++++|++|+.||+|++||+...
T Consensus 249 ~~~~~~~~~~s----g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 249 SPHYKELISGH----GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp ETTTTEEEEEE----CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cccccceEEEE----EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999988652 367999999999999999999999999999999999999999999999999999764
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6e-51 Score=335.12 Aligned_cols=285 Identities=20% Similarity=0.395 Sum_probs=257.8
Q ss_pred CcccccceeeeecCC------ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEe
Q 019847 13 LMEDYYSKVIDWGRN------NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWD 86 (335)
Q Consensus 13 ~~~~~~~~~~~~~~~------~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 86 (335)
..+...+.+++|+++ .+++++.|+.|++|++++++......+.+|...|.+++|+|++.++++++.|+.|++||
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 346778999999763 57888899999999999888766778899999999999999999999999999999999
Q ss_pred CCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCC
Q 019847 87 AETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
+.+++.+..+..+...+.+++|+| ++++|++++.||.|++|+++++.. ...+..|...+.+++|+|++++|++++.||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~-~~~~~~~~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 109 LENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKK-EYSLDTRGKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp TTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSE-EEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCce-eEEecCCCceEEEEEECCCCCEEEEEcCCC
Confidence 999999999999999999999999 999999999999999999997765 455677889999999999999999999999
Q ss_pred eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEEEeCCCC
Q 019847 167 VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGLEWNRHH 245 (335)
Q Consensus 167 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~ 245 (335)
.|++||+++ .+.+..+.+|..+|.+++|+|++. ++++++ .|+.|++||+++++....+..+ ..+.+++|+|++
T Consensus 187 ~i~iwd~~~---~~~~~~~~~h~~~v~~l~~spd~~-~l~s~s--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~ 260 (321)
T 3ow8_A 187 IINIFDIAT---GKLLHTLEGHAMPIRSLTFSPDSQ-LLVTAS--DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 260 (321)
T ss_dssp CEEEEETTT---TEEEEEECCCSSCCCEEEECTTSC-EEEEEC--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred eEEEEECCC---CcEEEEEcccCCceeEEEEcCCCC-EEEEEc--CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC
Confidence 999999876 455777888999999999999996 555555 8999999999999998888754 579999999999
Q ss_pred ceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 246 KEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
.+++++ +.|+.|++||+.+++++..+.+|...|.+++|+|++++|++++.||.|++||..
T Consensus 261 ~~l~s~------s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 261 THFVSS------SSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SEEEEE------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEE------eCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999887 779999999999999999999999999999999999999999999999999963
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.9e-50 Score=341.42 Aligned_cols=282 Identities=24% Similarity=0.437 Sum_probs=254.2
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+++++|+++ .+++++.|+.|++||+.+++... .+.+|...|.+++|+|++++|++|+.||+|++||+.+++.
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~--~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER--TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE--EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE--EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 4567889999984 57778899999999999988644 5678999999999999999999999999999999999999
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWE 172 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 172 (335)
+..+.+|...|.+++|+| ++++|++|+.|+.|++||++++.. ...+.+|...|.++.++|++++|++|+.|+.|++||
T Consensus 185 ~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 185 IRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp EECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcE-EEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 999999999999999999 999999999999999999997665 566789999999999999999999999999999999
Q ss_pred ccCCCcccceeeccCCCCCeeEEEecCCC-------------------CcEEEEecCCCCCeEEEEECCCCceEEEeec-
Q 019847 173 RSKMSSSKSLHRFTDHCGGVKALAWSPHQ-------------------VNVLATGGGREDGCIKIWNVQKGTCIHGIDA- 232 (335)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~- 232 (335)
++.. .....+.+|...|.+++|+|++ ..++++++ .|+.|++||+++++++..+..
T Consensus 263 ~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 263 VATK---ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp TTTC---CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECC
T ss_pred CCCC---ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe--CCCeEEEEECCCCceEEEEECC
Confidence 8764 4566778899999999999973 23667766 899999999999999988875
Q ss_pred CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 233 KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
...+.+++|+|++++++++ +.|+.|++||+.+++.+..+.+|...|++++|+|++.+|++|+.||.|++|+++
T Consensus 338 ~~~v~~v~~~~~g~~l~s~------s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFILSC------ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp SSCEEEEEECSSSSCEEEE------ETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred CCcEEEEEEcCCCCEEEEE------eCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 4579999999999999987 789999999999999999999999999999999999999999999999999863
No 5
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-49 Score=337.07 Aligned_cols=307 Identities=39% Similarity=0.757 Sum_probs=271.3
Q ss_pred cccccccCCCCcccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcE
Q 019847 3 REARILDAPYLMEDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKL 82 (335)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 82 (335)
.|.++++.+....++++.+++|+++.+++++.|+.|++||+.+++....... .|...|.+++|+|++++|++|+.||.|
T Consensus 80 ~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~-~~~~~v~~v~~s~~~~~l~~~~~dg~i 158 (401)
T 4aez_A 80 TPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAET-DESTYVASVKWSHDGSFLSVGLGNGLV 158 (401)
T ss_dssp SCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred CcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeec-CCCCCEEEEEECCCCCEEEEECCCCeE
Confidence 4667788888888999999999999999999999999999999987666554 388999999999999999999999999
Q ss_pred EEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE
Q 019847 83 QLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 83 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (335)
++||+.+++.+..+..|...|.+++| +++.|++++.||.|++||++........+..|...|.+++|+|++++|+++
T Consensus 159 ~iwd~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 159 DIYDVESQTKLRTMAGHQARVGCLSW---NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECcCCeEEEEecCCCCceEEEEE---CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence 99999999999999999999999999 457999999999999999997677777888999999999999999999999
Q ss_pred eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeC
Q 019847 163 GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWN 242 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 242 (335)
+.||.|++||++. ...+..+..|...|.+++|+|++..++++++|+.|+.|++||+++++.+..+..+..+.+++|+
T Consensus 236 ~~d~~v~iwd~~~---~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s 312 (401)
T 4aez_A 236 GNDNVVQIWDARS---SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWS 312 (401)
T ss_dssp ETTSCEEEEETTC---SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEEC
T ss_pred eCCCeEEEccCCC---CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEEC
Confidence 9999999999886 3456677789999999999999999999976668999999999999999999999999999999
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEECCCCceee--cccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCcc
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKYPNMTKVG--ELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSV 320 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~ 320 (335)
|+++.+++.. +..|+.|++||+.+++... .+.+|...|.+++|+|++++|++++.||.|++|++..++......
T Consensus 313 ~~~~~l~~~~----g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 313 PHSKEIMSTH----GFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp SSSSEEEEEE----CTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--------
T ss_pred CCCCeEEEEe----ecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9999998741 2579999999999865544 467899999999999999999999999999999999887665443
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-48 Score=323.25 Aligned_cols=278 Identities=19% Similarity=0.396 Sum_probs=246.3
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc--
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS-- 90 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-- 90 (335)
+...+.+++|+++ .+++++.|+.|++||..+++... .++.|...|.+++|+|++++|++|+.|+.|++|++.++
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH--AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE--EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce--EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 4567889999984 57778899999999999887644 45678999999999999999999999999999999875
Q ss_pred --eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeE
Q 019847 91 --KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVV 168 (335)
Q Consensus 91 --~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 168 (335)
+....+.+|...|.++.|++ ++ .+++++.|+.|++||++++.. ...+.+|...|.+++|+|++++|++|+.|+.|
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQ-TTTFTGHTGDVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcE-EEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 45667888999999999987 54 589999999999999986654 66678899999999999999999999999999
Q ss_pred EEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCC---cEeEEEeCCCC
Q 019847 169 RIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKA---QICGLEWNRHH 245 (335)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~---~~~~~~~~~~~ 245 (335)
++||+++. .....+.+|...|.+++|+|++. ++++++ .|+.|++||+++++.+..+.++. .+.+++|+|++
T Consensus 209 ~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 209 KLWDVREG---MCRQTFTGHESDINAICFFPNGN-AFATGS--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp EEEETTTC---SEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred EEEECCCC---eeEEEEcCCcCCEEEEEEcCCCC-EEEEEc--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 99998764 45777888999999999999996 455555 89999999999998888776543 69999999999
Q ss_pred ceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEe
Q 019847 246 KEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWE 309 (335)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~ 309 (335)
+++++| +.|+.|++||+.+++.+..+.+|...|.+++|+|++.+|++|+.||.|++||
T Consensus 283 ~~l~~g------~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 283 RLLLAG------YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEE------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEE------CCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999988 7799999999999999999999999999999999999999999999999996
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.4e-48 Score=317.57 Aligned_cols=285 Identities=19% Similarity=0.349 Sum_probs=246.7
Q ss_pred CcccccceeeeecCC---ceEEEecCCeEEEEEecCCce---eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEe
Q 019847 13 LMEDYYSKVIDWGRN---NVLAVALGPVLFLWKWENGKV---KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWD 86 (335)
Q Consensus 13 ~~~~~~~~~~~~~~~---~~~~~~~~~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 86 (335)
..+...+.+++|+++ .+++++.|++|++|++..... .+...+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 346678899999863 477888999999999875332 23556789999999999999999999999999999999
Q ss_pred CCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecC------CCEEE
Q 019847 87 AETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE------GNLLA 160 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~ 160 (335)
+++++.+..+.+|...|.+++|+| ++.+|++|+.|+.|++||++ +. ....+.+|...|.+++|+|. +..++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~-~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK-GQ-CLATLLGHNDWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT-SC-EEEEECCCSSCEEEEEECCC------CCEEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC-CC-eEEEEeccCCcEEEEEEccCCCCCCCccEEE
Confidence 999999999999999999999999 99999999999999999996 33 45667889999999999984 44899
Q ss_pred EEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEE
Q 019847 161 SGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLE 240 (335)
Q Consensus 161 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 240 (335)
+++.|+.|++||++. .+....+.+|...|.+++|+|++. ++++++ .|+.|++||+++++.+..+..+.++.+++
T Consensus 171 s~~~d~~i~~wd~~~---~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~ 244 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQ---FQIEADFIGHNSNINTLTASPDGT-LIASAG--KDGEIMLWNLAAKKAMYTLSAQDEVFSLA 244 (319)
T ss_dssp EEETTSCEEEEETTT---TEEEEEECCCCSCEEEEEECTTSS-EEEEEE--TTCEEEEEETTTTEEEEEEECCSCEEEEE
T ss_pred EEeCCCEEEEEECCc---chhheeecCCCCcEEEEEEcCCCC-EEEEEe--CCCeEEEEECCCCcEEEEecCCCcEEEEE
Confidence 999999999999876 345667788999999999999996 455554 89999999999999999999999999999
Q ss_pred eCCCCceeeeeeeeeeecCCCeEEEEECCCCceeeccc--------CCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 241 WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQ--------SSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
|+|++..++++. ++.+++|++.....+..+. .|...+.+++|+|||++|++|+.||.|++||+.+
T Consensus 245 ~sp~~~~la~~~-------~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 245 FSPNRYWLAAAT-------ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ECSSSSEEEEEE-------TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred EcCCCCEEEEEc-------CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 999999988762 5679999998876655543 3456789999999999999999999999999875
Q ss_pred C
Q 019847 313 P 313 (335)
Q Consensus 313 ~ 313 (335)
.
T Consensus 318 ~ 318 (319)
T 3frx_A 318 A 318 (319)
T ss_dssp C
T ss_pred c
Confidence 4
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4.3e-48 Score=325.82 Aligned_cols=287 Identities=18% Similarity=0.364 Sum_probs=247.2
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce-
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK- 91 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~- 91 (335)
+...+.+++|+++ .+++++.|++|++||+.+++... .+..|...|.+++|+|++++|++|+.|+.+++||+.+..
T Consensus 65 H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~--~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH--AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE--EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce--EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 4567899999984 58888899999999999887644 556899999999999999999999999999999987532
Q ss_pred ------eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE----eecCCCCEEEEEeec-CCCEEE
Q 019847 92 ------LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC----IKAHSGEVCGLKWSN-EGNLLA 160 (335)
Q Consensus 92 ------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~----~~~~~~~i~~~~~~~-~~~~l~ 160 (335)
....+.+|...+.++.|.|..+..|++|+.|++|++||++++..+... ..+|...|.+++|++ ++++|+
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 345678899999999999966778999999999999999977654322 157899999999987 889999
Q ss_pred EEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCC------
Q 019847 161 SGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKA------ 234 (335)
Q Consensus 161 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~------ 234 (335)
+|+.|+.|++||++.. ...+..+.+|.+.|.+++|+|++. ++++++ .|+.|++||+++++.+..+..+.
T Consensus 223 sgs~D~~v~~wd~~~~--~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRIT--SRAVRTYHGHEGDINSVKFFPDGQ-RFGTGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp EEETTSCEEEEETTTT--CCCCEEECCCSSCCCEEEECTTSS-EEEEEC--SSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred EEECCCeEEEEECCCC--CcceEEECCcCCCeEEEEEecCCC-eEEEEc--CCCeEEEEECCCCcEEEEecccccccccc
Confidence 9999999999998743 245677888999999999999996 555555 89999999999999888775421
Q ss_pred --cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecc----cCCCCceeEeEEcCCCCEEEEEeCCCcEEEE
Q 019847 235 --QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGEL----QSSNSRILDLSQSPDGLTVATAGADETIRFW 308 (335)
Q Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw 308 (335)
.+.+++|+|+++++++| +.||.|++||..+++.+..+ .+|.+.|++++|+|+|++|++|+.||.|++|
T Consensus 298 ~~~v~~~~~s~~g~~l~~g------~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAG------YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp SCSCSEEEECSSSSEEEEE------CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred cCceEEEEECCCCCEEEEE------ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 37899999999999988 77999999999998887766 6799999999999999999999999999999
Q ss_pred ecCCCC
Q 019847 309 EAFGPS 314 (335)
Q Consensus 309 ~~~~~~ 314 (335)
++...+
T Consensus 372 ~~~~~~ 377 (380)
T 3iz6_a 372 AFSGHR 377 (380)
T ss_dssp ECCSSS
T ss_pred ecCCCc
Confidence 998754
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.9e-48 Score=315.78 Aligned_cols=269 Identities=16% Similarity=0.255 Sum_probs=237.0
Q ss_pred EEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEec
Q 019847 51 LLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 51 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~ 130 (335)
...+.+|.+.|++++|+|++++|++|+.||.|++||+++++.+..+..|..+|.+++|+| ++++|++|+.|+.|++||+
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEET
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEEC
Confidence 345668999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC
Q 019847 131 RVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG 210 (335)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g 210 (335)
++++. ...+.+|...|.+++|+|++++|++|+.|++|++||++... .....+.+|...|.+++|+|++..++++++
T Consensus 85 ~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs- 160 (304)
T 2ynn_A 85 NTGEK-VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTFEGHEHFVMCVAFNPKDPSTFASGC- 160 (304)
T ss_dssp TTCCE-EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT--EEEEEECCCCSCEEEEEECTTCTTEEEEEE-
T ss_pred CCCcE-EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc--chhhhhcccCCcEEEEEECCCCCCEEEEEe-
Confidence 97765 56678999999999999999999999999999999987642 345667889999999999997666777777
Q ss_pred CCCCeEEEEECCCCceEEEeec--CCcEeEEEeCC--CCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeE
Q 019847 211 REDGCIKIWNVQKGTCIHGIDA--KAQICGLEWNR--HHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILD 286 (335)
Q Consensus 211 ~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 286 (335)
.|+.|++||++++.....+.. ...+..+.|+| ++.+++++ +.|+.|++||+++++++..+.+|...|.+
T Consensus 161 -~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~------s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 161 -LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA------SDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp -TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE------ETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred -CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE------cCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 899999999988877666543 35688888876 66778777 78999999999999999999999999999
Q ss_pred eEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCcccccccccccee
Q 019847 287 LSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKT 331 (335)
Q Consensus 287 ~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~ 331 (335)
++|+|++++|++|+.||.|++||+.+.+....+..|...+.++.+
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIAT 278 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEE
Confidence 999999999999999999999999988776666666666665553
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-47 Score=316.93 Aligned_cols=290 Identities=20% Similarity=0.355 Sum_probs=238.2
Q ss_pred cceeeeecCC--ceEEEecCCeEEEEEecCCceeeEE-eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc--ee
Q 019847 18 YSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLL-QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS--KL 92 (335)
Q Consensus 18 ~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~ 92 (335)
.+.+++|+++ .+++++.|+.|++||+++++..... ...+|...|.+++|+|++++|++|+.|+.+++|++.++ +.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 6788999984 5777889999999999988754333 33689999999999999999999999999999998876 45
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe--eeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN--VTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 170 (335)
+..+.+|...|.+++|+| ++++|++|+.|+.|++||++.... ....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 98 ~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~ 176 (345)
T 3fm0_A 98 VTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176 (345)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred EEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence 778899999999999999 999999999999999999986543 35567789999999999999999999999999999
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC---------------ceEEEee--cC
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG---------------TCIHGID--AK 233 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~---------------~~~~~~~--~~ 233 (335)
||++... ......+.+|...|.+++|+|++.. +++++ .|+.|++||.... +++..+. +.
T Consensus 177 w~~~~~~-~~~~~~~~~h~~~v~~l~~sp~g~~-l~s~s--~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 252 (345)
T 3fm0_A 177 YREEEDD-WVCCATLEGHESTVWSLAFDPSGQR-LASCS--DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHS 252 (345)
T ss_dssp EEEETTE-EEEEEEECCCSSCEEEEEECTTSSE-EEEEE--TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCS
T ss_pred EEecCCC-EEEEEEecCCCCceEEEEECCCCCE-EEEEe--CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCC
Confidence 9987532 2345677889999999999999965 55555 8999999996322 2233333 34
Q ss_pred CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce---------eecccCCCCceeEeEEcCCC-CEEEEEeCCC
Q 019847 234 AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK---------VGELQSSNSRILDLSQSPDG-LTVATAGADE 303 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~---------~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg 303 (335)
..+.+++|+|++..++++ +.|+.|++|+...... .....+|...|++++|+|++ .+|++|+.||
T Consensus 253 ~~v~~v~~~~~~~~l~s~------~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg 326 (345)
T 3fm0_A 253 RTIYDIAWCQLTGALATA------CGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDG 326 (345)
T ss_dssp SCEEEEEECTTTCCEEEE------ETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTS
T ss_pred CcEEEEEEecCCCEEEEE------eCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCC
Confidence 579999999999999887 6799999999875431 12346899999999999997 5999999999
Q ss_pred cEEEEecCCCCCCCC
Q 019847 304 TIRFWEAFGPSGDED 318 (335)
Q Consensus 304 ~v~iw~~~~~~~~~~ 318 (335)
.|++|++..++...+
T Consensus 327 ~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 327 EVAFWKYQRPEGLHH 341 (345)
T ss_dssp CEEEEEECC------
T ss_pred cEEEEEecCCCCccc
Confidence 999999998776543
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=5.2e-48 Score=319.92 Aligned_cols=288 Identities=18% Similarity=0.197 Sum_probs=229.7
Q ss_pred cccceeeeecCC-ceEEEecCCeEEEEEecCCce---------eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEE
Q 019847 16 DYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKV---------KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLW 85 (335)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 85 (335)
+..+.+++|+++ .+++++.|+++++||...... ........|...|.+++|+|++ .|++|+.||.|+||
T Consensus 30 ~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lW 108 (344)
T 4gqb_B 30 ERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVELW 108 (344)
T ss_dssp CSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEEEE
T ss_pred cCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEEEE
Confidence 456889999985 677777888888887431100 0001112356789999999985 68899999999999
Q ss_pred eCCCceeEee----ecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCC-CEEE
Q 019847 86 DAETSKLVRN----LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEG-NLLA 160 (335)
Q Consensus 86 ~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~ 160 (335)
|+++++.+.. ..+|...|++++|+| ++++|++|+.|++|++||+++++ ....+.+|...|.+++|+|++ .+|+
T Consensus 109 d~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~~V~~~~~~~~~~~~l~ 186 (344)
T 4gqb_B 109 ELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAAQVTCVAASPHKDSVFL 186 (344)
T ss_dssp EECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECSSCTTEEE
T ss_pred eccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCc-EEEEEcCcCCceEEEEecCCCCCcee
Confidence 9998875543 347999999999999 99999999999999999998654 467788999999999999987 5789
Q ss_pred EEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEE
Q 019847 161 SGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGL 239 (335)
Q Consensus 161 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~ 239 (335)
+++.|+.|++||++.++....+. ...+...+.+++|+|++..++++++ .|+.|++||+++++++..+.. ...|.++
T Consensus 187 s~s~D~~v~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~l~sg~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 187 SCSEDNRILLWDTRCPKPASQIG-CSAPGYLPTSLAWHPQQSEVFVFGD--ENGTVSLVDTKSTSCVLSSAVHSQCVTGL 263 (344)
T ss_dssp EEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEE--TTSEEEEEESCC--CCEEEECCSSCEEEE
T ss_pred eeccccccccccccccceeeeee-cceeeccceeeeecCCCCcceEEec--cCCcEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 99999999999998754322221 2345667999999998888888887 899999999999999988875 4689999
Q ss_pred EeCCCCc-eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCC-EEEEEeCCCcEEEEecCCCCCC
Q 019847 240 EWNRHHK-EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL-TVATAGADETIRFWEAFGPSGD 316 (335)
Q Consensus 240 ~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~ 316 (335)
+|+|++. +++++ +.|+.|++||+.+++.+ .+.+|.+.|++++|+|+++ +|++++.||+|++|++...+..
T Consensus 264 ~fsp~g~~~lasg------s~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 264 VFSPHSVPFLASL------SEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp EECSSSSCCEEEE------ETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC----
T ss_pred EEccCCCeEEEEE------eCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCCC
Confidence 9999985 56666 78999999999988765 5689999999999999986 5679999999999999876543
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.3e-47 Score=308.49 Aligned_cols=285 Identities=17% Similarity=0.255 Sum_probs=246.6
Q ss_pred cccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 14 MEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
.+...+.+++|+++ .+++++.|+.|++||+++++... .+..|..+|.+++|+|++++|++|+.|+.|++||+++++
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE--EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 34567899999984 47778899999999999887644 556889999999999999999999999999999999999
Q ss_pred eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEE
Q 019847 92 LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRI 170 (335)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i 170 (335)
.+..+.+|...|.+++|+| ++.+|++|+.|++|++||++++..+...+.+|...|.+++|+| ++.+|++|+.|+.|++
T Consensus 89 ~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp EEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred EEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 9999999999999999999 9999999999999999999988777788889999999999999 6789999999999999
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCC-CcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEEEeCCCCcee
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQ-VNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGLEWNRHHKEI 248 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 248 (335)
||++..... ......|...+..+.|+|.. ..++++++ .|+.|++||+++++++..+..+ ..+.+++|+|++..+
T Consensus 168 wd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~s~s--~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 243 (304)
T 2ynn_A 168 WSLGQSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243 (304)
T ss_dssp EETTCSSCS--EEEECCCTTCEEEEEECCSTTCCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EECCCCCcc--ceeccCCcCcEEEEEEEEcCCCCEEEEEc--CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEE
Confidence 998765432 22334566789999998742 24666666 8999999999999999998864 689999999999999
Q ss_pred eeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCC--EEEEEeCCCcEEEEecCC
Q 019847 249 LSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL--TVATAGADETIRFWEAFG 312 (335)
Q Consensus 249 ~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~~~~~dg~v~iw~~~~ 312 (335)
+++ +.|+.|++||..+++.+..+..|...+.+++|+|++. ++++|+.|| +.+|++..
T Consensus 244 ~s~------s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 244 ISG------SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EEE------ETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EEE------cCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 887 7899999999999999999999999999999999875 577776554 66887765
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.8e-47 Score=315.34 Aligned_cols=279 Identities=16% Similarity=0.329 Sum_probs=245.4
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc--
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS-- 90 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-- 90 (335)
+...+.+++|+++ .+++++.|+.|++||..+++.... +..|...|.+++|+|++++|++|+.|+.+++|++...
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~--~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHA--VTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceE--EecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 5567899999984 578888999999999988876544 4467889999999999999999999999999998643
Q ss_pred ----eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeec--CCCEEEEEeC
Q 019847 91 ----KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN--EGNLLASGGD 164 (335)
Q Consensus 91 ----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~ 164 (335)
.....+..|...|.++.|+| ++..|++++.|++|++||+++++. ...+.+|...|.+++|+| ++++|++|+.
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQL-LQSFHGHGADVLCLDLAPSETGNTFVSGGC 218 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECCCSSCCEEEEEET
T ss_pred ccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeE-EEEEcCCCCCeEEEEEEeCCCCCEEEEEeC
Confidence 34556778999999999999 899999999999999999987654 667889999999999988 5789999999
Q ss_pred CCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC---CcEeEEEe
Q 019847 165 DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK---AQICGLEW 241 (335)
Q Consensus 165 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~ 241 (335)
||.|++||++++ +.+..+..|...|.+++|+|++. ++++++ .|+.|++||+++++.+..+..+ ..+.+++|
T Consensus 219 Dg~v~~wd~~~~---~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 219 DKKAMVWDMRSG---QCVQAFETHESDVNSVRYYPSGD-AFASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp TSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred CCeEEEEECCCC---cEEEEecCCCCCeEEEEEeCCCC-EEEEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 999999998874 45777888999999999999996 555555 8999999999998887776543 36889999
Q ss_pred CCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEe
Q 019847 242 NRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWE 309 (335)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~ 309 (335)
+|++.+++++ +.|+.|++||+.+++.+..+.+|...|++++|+|++++|++|+.||.|++|+
T Consensus 293 s~~g~~l~~g------~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAG------YNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEE------ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEE------ECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999988 6799999999999999999999999999999999999999999999999996
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-47 Score=313.78 Aligned_cols=287 Identities=21% Similarity=0.327 Sum_probs=229.3
Q ss_pred ccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEee-cC-CCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC---
Q 019847 15 EDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQV-PG-EDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET--- 89 (335)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~--- 89 (335)
+...+.+++|+++.+++++.|+.|++||++++.......+ .+ |...|.+++|+|++++|++|+.|+.|++||++.
T Consensus 13 h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 13 YKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp CSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-----
T ss_pred CCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcC
Confidence 4567889999999888888999999999987643333334 34 999999999999999999999999999999853
Q ss_pred ----ceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC---eeeEEeecCCCCEEEEEeecCCCEEEEE
Q 019847 90 ----SKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN---NVTSCIKAHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 90 ----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (335)
.+.+..+.+|...|.+++|+| ++++|++|+.|+.|++||++... .....+.+|...|.+++|+|++++|+++
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASS 171 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred ccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEE
Confidence 356777889999999999999 99999999999999999995332 3456678899999999999999999999
Q ss_pred eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCC-cEEEEecCCCCCeEEEEECCCC--------ceEEEee--
Q 019847 163 GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQV-NVLATGGGREDGCIKIWNVQKG--------TCIHGID-- 231 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~g~~d~~i~i~d~~~~--------~~~~~~~-- 231 (335)
+.|+.|++||++... ...+..+.+|...|.+++|+|++. .++++++ .|+.|++||++.+ .+...+.
T Consensus 172 s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 248 (330)
T 2hes_X 172 SYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS--DDSTVRVWKYMGDDEDDQQEWVCEAILPDV 248 (330)
T ss_dssp ETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECCSSSSCEEEEEE--TTSCEEEEEEEEECTTSCEEEEEEEECCSC
T ss_pred cCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEecCCCCeeEEEEEe--CCCeEEEEEecCCCccccceeEEeeecccc
Confidence 999999999987532 245777889999999999999842 4566666 8999999998754 3334443
Q ss_pred cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc--eee-cccCCCC-ceeEeEEcC--CCCEEEEEeCCCcE
Q 019847 232 AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT--KVG-ELQSSNS-RILDLSQSP--DGLTVATAGADETI 305 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~--~~~-~~~~~~~-~i~~~~~~~--~~~~l~~~~~dg~v 305 (335)
+...+.+++|++++ .++++ +.|+.|++||..+++ ... ...+|.. .|.+++|+| ++++|++|+.||.|
T Consensus 249 h~~~v~~v~~s~~~-~l~s~------~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 249 HKRQVYNVAWGFNG-LIASV------GADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp CSSCEEEEEECTTS-CEEEE------ETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred cccceEEEEEcCCC-EEEEE------eCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 45689999999765 56665 679999999988764 332 3457876 899999999 78999999999999
Q ss_pred EEEecCC
Q 019847 306 RFWEAFG 312 (335)
Q Consensus 306 ~iw~~~~ 312 (335)
++|++..
T Consensus 322 ~~W~~~~ 328 (330)
T 2hes_X 322 NFWSLEK 328 (330)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 9999865
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.4e-46 Score=310.99 Aligned_cols=283 Identities=18% Similarity=0.258 Sum_probs=236.6
Q ss_pred ccccceeeee-----cC---CceEEEecCCeEEEEEecCCc-----eeeEEeecCCCCCceEEEEcCCCCEEEEEECCCc
Q 019847 15 EDYYSKVIDW-----GR---NNVLAVALGPVLFLWKWENGK-----VKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSK 81 (335)
Q Consensus 15 ~~~~~~~~~~-----~~---~~~~~~~~~~~i~vw~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 81 (335)
+...+.+++| ++ ..+++++.|++|++||+.+.+ ......+.+|...|.+++|+|++.++++|+.|++
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~ 99 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKT 99 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSE
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCc
Confidence 5567888988 43 357788899999999997653 2345567899999999999999999999999999
Q ss_pred EEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE--eecCCCCEEEEEeecCC---
Q 019847 82 LQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC--IKAHSGEVCGLKWSNEG--- 156 (335)
Q Consensus 82 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~~~~~--- 156 (335)
|++||+++++.+..+.+|...|.+++|+| ++++|++++.|+.|++||+.. ...... ...|...|.+++|+|++
T Consensus 100 v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 100 LRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp EEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred EEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccc
Confidence 99999999999999999999999999999 999999999999999999973 322221 12688899999999986
Q ss_pred -------CEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC-CCceEE
Q 019847 157 -------NLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ-KGTCIH 228 (335)
Q Consensus 157 -------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~-~~~~~~ 228 (335)
.+|++++.||.|++||.+ ......+.+|...|.+++|+|++.+ +++++ .|+.|++||+. ......
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~h~~~v~~~~~s~~g~~-l~sgs--~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTFKAHESNVNHLSISPNGKY-IATGG--KDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEETT----TEEEEEEECCSSCEEEEEECTTSSE-EEEEE--TTCEEEEEESSCCSSCSE
T ss_pred cccCCCCCEEEEEcCCCEEEEEcCC----CceeEEEcCccccceEEEECCCCCE-EEEEc--CCCeEEEEECCCCcccce
Confidence 799999999999999943 2445677889999999999999965 55554 89999999994 445556
Q ss_pred EeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceee--ccc-----------CCCCceeEeEEcCCCCE
Q 019847 229 GIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVG--ELQ-----------SSNSRILDLSQSPDGLT 295 (335)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~--~~~-----------~~~~~i~~~~~~~~~~~ 295 (335)
.+.....+.+++|+|++.+++++ .|+.|++||+.+++... .+. +|...|.+++|+|+|++
T Consensus 251 ~~~~~~~v~~v~~sp~~~~la~~-------~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 323 (343)
T 2xzm_R 251 EFDAGSTINQIAFNPKLQWVAVG-------TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK 323 (343)
T ss_dssp EEECSSCEEEEEECSSSCEEEEE-------ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC
T ss_pred eecCCCcEEEEEECCCCCEEEEE-------CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe
Confidence 66667789999999999877654 48889999998766543 332 67788999999999999
Q ss_pred EEEEeCCCcEEEEecCCC
Q 019847 296 VATAGADETIRFWEAFGP 313 (335)
Q Consensus 296 l~~~~~dg~v~iw~~~~~ 313 (335)
|++|+.||.|++|++..+
T Consensus 324 l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 324 LFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEEEETTSEEEEEEEEEE
T ss_pred EEEecCCceEEEEEEEcc
Confidence 999999999999998754
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.2e-47 Score=318.47 Aligned_cols=292 Identities=19% Similarity=0.258 Sum_probs=228.6
Q ss_pred ccccceeeeecCC-ceEE-Eec------CCeEEEEEecCCceee--EEeecCCCCCceEEEEcCCCCEEEEEECCCcEEE
Q 019847 15 EDYYSKVIDWGRN-NVLA-VAL------GPVLFLWKWENGKVKK--LLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQL 84 (335)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~-~~~------~~~i~vw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 84 (335)
++..+++++|+++ .+++ ++. |+.|++|+..++.... .....+|...|.+++|+|+++ +++++.||.|++
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~l 119 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVEL 119 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEE
Confidence 5677999999995 4444 444 6789999887765322 123346888999999999985 556778999999
Q ss_pred EeCCCceeEee----ecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCC-EE
Q 019847 85 WDAETSKLVRN----LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGN-LL 159 (335)
Q Consensus 85 w~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l 159 (335)
||+.+++.... ..+|...|.+++|+| ++++|++|+.|+.|++||++++. ....+.+|...|++++|+|++. ++
T Consensus 120 Wd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~-~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 120 WEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKA-VLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp C--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTCSSCE
T ss_pred eeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCc-EEEEEcCCCCCEEEEEEccCCCcee
Confidence 99998765432 347899999999999 99999999999999999998654 4667889999999999999764 78
Q ss_pred EEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeE
Q 019847 160 ASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICG 238 (335)
Q Consensus 160 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~ 238 (335)
++++.||.|++||++++..... .....+...+.+++|+|++..++++++ .|+.|++||+++++++..+.. ...+.+
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~la~g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 274 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTFACGD--ETGNVSLVNIKNPDSAQTSAVHSQNITG 274 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEEEEEE--SSSCEEEEESSCGGGCEEECCCSSCEEE
T ss_pred eeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceEEEee--cccceeEEECCCCcEeEEEeccceeEEE
Confidence 9999999999999987544322 233457778999999999888888887 899999999999999888875 468999
Q ss_pred EEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcC-CCCEEEEEeCCCcEEEEecCCCCCC
Q 019847 239 LEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSP-DGLTVATAGADETIRFWEAFGPSGD 316 (335)
Q Consensus 239 ~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~iw~~~~~~~~ 316 (335)
++|+|++. +++++ +.|+.|++||+++++.+..+ +|.+.|++++|+| ++.+|++++.||.|++|++......
T Consensus 275 l~~sp~~~~~lasg------s~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 275 LAYSYHSSPFLASI------SEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp EEECSSSSCCEEEE------ETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EEEcCCCCCEEEEE------eCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 99999985 56666 78999999999998887654 7999999999998 7899999999999999999876554
Q ss_pred CCc
Q 019847 317 EDS 319 (335)
Q Consensus 317 ~~~ 319 (335)
...
T Consensus 348 ~~~ 350 (357)
T 4g56_B 348 ENL 350 (357)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-46 Score=334.55 Aligned_cols=306 Identities=17% Similarity=0.237 Sum_probs=250.7
Q ss_pred cccccceeeeecCC---ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc
Q 019847 14 MEDYYSKVIDWGRN---NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 14 ~~~~~~~~~~~~~~---~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 90 (335)
.+...+.+++|+++ .+++++.|+.|++||..+++. ...+.+|...|.+++|+|++++|++|+.|++|++||+.++
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~--~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g 222 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF--KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDG 222 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE--eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCC
Confidence 34567889999985 377888999999999887765 3456799999999999999999999999999999999999
Q ss_pred eeEeeec-------ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee---------------------------
Q 019847 91 KLVRNLE-------GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV--------------------------- 136 (335)
Q Consensus 91 ~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--------------------------- 136 (335)
+.+..+. +|...|.+++|+| ++++|++++.|++|++||+++++..
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred cEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe
Confidence 9888774 7999999999999 9999999999999999999765432
Q ss_pred ---------------eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccce-------------------
Q 019847 137 ---------------TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSL------------------- 182 (335)
Q Consensus 137 ---------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------------------- 182 (335)
...+.+|...|++++|+|++++|++++.|+.|++||+.++......
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l 381 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL 381 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE
T ss_pred CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcE
Confidence 2234579999999999999999999999999999998753211000
Q ss_pred -------------------------------------------------------------eeccCCCCCeeEEEecCCC
Q 019847 183 -------------------------------------------------------------HRFTDHCGGVKALAWSPHQ 201 (335)
Q Consensus 183 -------------------------------------------------------------~~~~~~~~~v~~~~~~~~~ 201 (335)
..+ .|...+.+++|+|++
T Consensus 382 ~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~-~~~~~v~~va~spdg 460 (611)
T 1nr0_A 382 FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV-PISYNSSCVALSNDK 460 (611)
T ss_dssp EEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE-ECSSCEEEEEECTTS
T ss_pred EEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee-ecCCCceEEEEeCCC
Confidence 000 123457889999999
Q ss_pred CcEEEEecCCCCCeEEEEECCCCce--EEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC-Cceeec--
Q 019847 202 VNVLATGGGREDGCIKIWNVQKGTC--IHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN-MTKVGE-- 276 (335)
Q Consensus 202 ~~~~~~~~g~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~~-- 276 (335)
+ ++++++ .|+.|++||+.+++. +....+...+.+++|+|++++++++ +.|+.|++||+.+ ++....
T Consensus 461 ~-~lasgs--~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~------s~d~~v~~w~~~~~~~~~~~~~ 531 (611)
T 1nr0_A 461 Q-FVAVGG--QDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVAT------DQSRKVIPYSVANNFELAHTNS 531 (611)
T ss_dssp C-EEEEEE--TTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEE------ETTSCEEEEEGGGTTEESCCCC
T ss_pred C-EEEEeC--CCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEE------cCCCCEEEEEcCCCCceeeeee
Confidence 6 555655 899999999987654 3344567789999999999999987 7799999999987 555543
Q ss_pred ccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCC--CCcccc-ccccccceec
Q 019847 277 LQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGD--EDSVSH-LAGLVSLKTS 332 (335)
Q Consensus 277 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~--~~~~~~-~~~i~~~~~~ 332 (335)
+..|...|.+++|+||+++|++|+.|+.|++|++..+... ....+| ...|.++.|+
T Consensus 532 ~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs 590 (611)
T 1nr0_A 532 WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 590 (611)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEE
T ss_pred eeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEc
Confidence 3459999999999999999999999999999999886533 244577 7788887764
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-45 Score=302.49 Aligned_cols=282 Identities=24% Similarity=0.444 Sum_probs=243.4
Q ss_pred cccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 14 MEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
.+...+.+++|+++ .+++++.|+.|++|+..+++... .+.+|...|.+++|+|++++|++|+.||.|++||+++++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch--hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 45667899999984 47777899999999999887644 456899999999999999999999999999999999999
Q ss_pred eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEE
Q 019847 92 LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIW 171 (335)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 171 (335)
.+..+..|...|.++.|+| ++++|++|+.|+.|++||+++++. ...+..|..+|.+++|+|++++|++++.||.|++|
T Consensus 99 ~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 176 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 176 (312)
T ss_dssp EEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEE-EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 9999999999999999999 999999999999999999986654 56677899999999999999999999999999999
Q ss_pred EccCCCcccceeec-cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCc----EeEEEeCCCCc
Q 019847 172 ERSKMSSSKSLHRF-TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQ----ICGLEWNRHHK 246 (335)
Q Consensus 172 d~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (335)
|+++.. .+..+ ..+..++..++|+|++..+++.+ .|+.|++||+++++.+..+..+.. +......+++.
T Consensus 177 d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 177 DTASGQ---CLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp ETTTCC---EEEEECCSSCCCEEEEEECTTSSEEEEEE---TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred ECCCCc---eeeEEeccCCCceEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 988643 23332 34667899999999997665544 799999999999999888865432 22233346677
Q ss_pred eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEe--CCCcEEEEecC
Q 019847 247 EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAG--ADETIRFWEAF 311 (335)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~v~iw~~~ 311 (335)
+++++ +.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .|+.|++|+.+
T Consensus 251 ~l~sg------~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 251 WIVSG------SEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEC------CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEE------CCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 77776 7899999999999999999999999999999999999999987 69999999865
No 19
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-46 Score=319.78 Aligned_cols=267 Identities=19% Similarity=0.340 Sum_probs=240.9
Q ss_pred EeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc
Q 019847 52 LQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR 131 (335)
Q Consensus 52 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 131 (335)
..+.+|..+|++++|+|++++|++|+.||.|++||+.+++....+.+|...|.+++|+| ++++|++|+.|++|++||+.
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETT
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCC
Confidence 34568999999999999999999999999999999999999999999999999999999 99999999999999999998
Q ss_pred cCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCC
Q 019847 132 VSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGR 211 (335)
Q Consensus 132 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~ 211 (335)
+.. ....+.+|...|.+++|+|++++|++|+.|+.|++||++++ ..+..+.+|...|.++.++|++. ++++++
T Consensus 181 ~~~-~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~g~-~l~s~s-- 253 (410)
T 1vyh_C 181 GFE-CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTG---YCVKTFTGHREWVRMVRPNQDGT-LIASCS-- 253 (410)
T ss_dssp SSC-EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECTTSS-EEEEEE--
T ss_pred CCc-eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC---cEEEEEeCCCccEEEEEECCCCC-EEEEEc--
Confidence 655 46667899999999999999999999999999999998764 45777889999999999999996 555555
Q ss_pred CCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCC--------------------ceeeeeeeeeeecCCCeEEEEECCC
Q 019847 212 EDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHH--------------------KEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 212 ~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
.|+.|++||++++++...+.. ...+.+++|+|++ .++++| +.|+.|++||+.+
T Consensus 254 ~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg------s~D~~i~iwd~~~ 327 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG------SRDKTIKMWDVST 327 (410)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEE------ETTSEEEEEETTT
T ss_pred CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEE------eCCCeEEEEECCC
Confidence 899999999999998888865 4679999999974 345554 8899999999999
Q ss_pred CceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 271 MTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 271 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
++++..+.+|...|++++|+|++++|++|+.||.|++||+..++.......|...|.++.++
T Consensus 328 ~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 389 (410)
T 1vyh_C 328 GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 389 (410)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEEC
T ss_pred CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEc
Confidence 99999999999999999999999999999999999999999888888788899889888775
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.6e-46 Score=333.43 Aligned_cols=311 Identities=18% Similarity=0.248 Sum_probs=254.0
Q ss_pred cccccccCCCCcccccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCc
Q 019847 3 REARILDAPYLMEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSK 81 (335)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 81 (335)
+..+++............+++|+|+ +.++.+.++.|++|++++++.. ..+.+|...|++++|+|+|++||+|+.||+
T Consensus 5 ~~~~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~--~~~~~h~~~v~~~~~spdg~~lasg~~d~~ 82 (611)
T 1nr0_A 5 SQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDT--EIYTEHSHQTTVAKTSPSGYYCASGDVHGN 82 (611)
T ss_dssp EEEEEECCCCCCCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCC--EEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ccccEECCCCCcccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccC--eEecCCCCceEEEEECCCCcEEEEEeCCCC
Confidence 4445555444445667788999984 5666667889999999877654 356699999999999999999999999999
Q ss_pred EEEEeCCCc--eeEeeecccccceeEeeecCCCCCEEEEeeCC----CcEEEEecccCCeeeEEeecCCCCEEEEEeecC
Q 019847 82 LQLWDAETS--KLVRNLEGHHRRVATSSWNHWNGHILTSGSKD----KSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE 155 (335)
Q Consensus 82 i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~ 155 (335)
|+|||+.++ .....+..|..+|.+++|+| +++.|++++.+ +.|++||.. . ....+.+|...|.+++|+|+
T Consensus 83 v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd~~--~-~~~~l~gh~~~v~~v~f~p~ 158 (611)
T 1nr0_A 83 VRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTG--T-SNGNLTGQARAMNSVDFKPS 158 (611)
T ss_dssp EEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTTC--C-BCBCCCCCSSCEEEEEECSS
T ss_pred EEEeECCCCcceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeEEEEeeCC--C-CcceecCCCCCceEEEECCC
Confidence 999999754 34557788999999999999 89999988865 478888843 3 24457889999999999999
Q ss_pred CC-EEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee---
Q 019847 156 GN-LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID--- 231 (335)
Q Consensus 156 ~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~--- 231 (335)
+. .|++++.|++|++||.+. .+....+.+|...|.+++|+|++. ++++++ .|+.|++||+.+++.+..+.
T Consensus 159 ~~~~l~s~s~D~~v~lwd~~~---~~~~~~l~~H~~~V~~v~fspdg~-~las~s--~D~~i~lwd~~~g~~~~~~~~~~ 232 (611)
T 1nr0_A 159 RPFRIISGSDDNTVAIFEGPP---FKFKSTFGEHTKFVHSVRYNPDGS-LFASTG--GDGTIVLYNGVDGTKTGVFEDDS 232 (611)
T ss_dssp SSCEEEEEETTSCEEEEETTT---BEEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSCEEEEETTTCCEEEECBCTT
T ss_pred CCeEEEEEeCCCeEEEEECCC---CeEeeeeccccCceEEEEECCCCC-EEEEEE--CCCcEEEEECCCCcEeeeecccc
Confidence 86 699999999999999765 455777889999999999999996 555555 89999999999999888873
Q ss_pred -----cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceee-------------------------------
Q 019847 232 -----AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVG------------------------------- 275 (335)
Q Consensus 232 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~------------------------------- 275 (335)
+...+.+++|+|++++++++ +.|+.|++||+.+++.+.
T Consensus 233 ~~~~~h~~~V~~v~~spdg~~l~s~------s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i 306 (611)
T 1nr0_A 233 LKNVAHSGSVFGLTWSPDGTKIASA------SADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 306 (611)
T ss_dssp SSSCSSSSCEEEEEECTTSSEEEEE------ETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred ccccccCCCEEEEEECCCCCEEEEE------eCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcE
Confidence 45689999999999999887 779999999998765543
Q ss_pred ------------cccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCc-ccccccccccee
Q 019847 276 ------------ELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDS-VSHLAGLVSLKT 331 (335)
Q Consensus 276 ------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-~~~~~~i~~~~~ 331 (335)
.+.+|...|++++|+|++++|++++.|+.|++||+..+...... ..|...|.++.+
T Consensus 307 ~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 307 NFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred EEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEE
Confidence 33578899999999999999999999999999999887543332 356666666554
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.8e-45 Score=308.13 Aligned_cols=287 Identities=23% Similarity=0.354 Sum_probs=236.8
Q ss_pred ccccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeec----------------CCCCCceEEEEcCCCCEEEEEE
Q 019847 15 EDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVP----------------GEDDYPTSVSWSHDAKTLAVGY 77 (335)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~~~~ 77 (335)
+...+.+++|+++ .+++++.++.+++|++.+++....+... .+...|.+++|+|++++|++|+
T Consensus 63 h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~ 142 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 142 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc
Confidence 4567889999984 6777778899999999998865433211 1223489999999999999999
Q ss_pred CCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeec-CC
Q 019847 78 MDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN-EG 156 (335)
Q Consensus 78 ~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~ 156 (335)
.||.|++||+++++.+..+.+|...|.+++|+| +++.|++++.|+.|++||++++... ..+ .+...+.+++|+| ++
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~-~~~-~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCS-LTL-SIEDGVTTVAVSPGDG 219 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE-EEE-ECSSCEEEEEECSTTC
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeE-EEE-EcCCCcEEEEEECCCC
Confidence 999999999999999999999999999999999 9999999999999999999876543 333 3677899999999 89
Q ss_pred CEEEEEeCCCeEEEEEccCCCcccce----eeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCc-------
Q 019847 157 NLLASGGDDNVVRIWERSKMSSSKSL----HRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGT------- 225 (335)
Q Consensus 157 ~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~------- 225 (335)
++|++++.||.|++||+++......+ ....+|...|.+++|+|++..+ ++++ .|+.|++||+++..
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l-~s~s--~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV-VSGS--LDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEE-EEEE--TTSEEEEEEC-----------
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEE-EEEe--CCCEEEEEECCCCCCcccccC
Confidence 99999999999999998865332222 1125788999999999999655 5555 89999999997643
Q ss_pred -----eEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcC------CC
Q 019847 226 -----CIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSP------DG 293 (335)
Q Consensus 226 -----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~------~~ 293 (335)
+...+. +...+.+++|+|++.+++++ +.|+.|++||..+++++..+.+|...|.+++|++ ++
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg------s~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~ 370 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSG------SKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY 370 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEE------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEE------eCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC
Confidence 333443 34579999999999999887 7899999999999999999999999999999886 68
Q ss_pred CEEEEEeCCCcEEEEecCCC
Q 019847 294 LTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 294 ~~l~~~~~dg~v~iw~~~~~ 313 (335)
++|++|+.||.|++|++...
T Consensus 371 ~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 371 NVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEEEEETTSEEEEEEEEEC
T ss_pred CEEEEECCCCcEEECccccc
Confidence 89999999999999998754
No 22
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.2e-44 Score=300.58 Aligned_cols=287 Identities=22% Similarity=0.373 Sum_probs=248.6
Q ss_pred cccccceeeeecCC---ceEEEecCCeEEEEEecCCce---eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 14 MEDYYSKVIDWGRN---NVLAVALGPVLFLWKWENGKV---KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 14 ~~~~~~~~~~~~~~---~~~~~~~~~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
.+...|++++|+|+ .+++++.|++|+|||+.+.+. .+...+.+|...|.+++|+|++++|++++.|+.|++|+.
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~ 115 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDL 115 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEee
Confidence 36678999999973 366788999999999987543 345567899999999999999999999999999999999
Q ss_pred CCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecC--CCEEEEEeCC
Q 019847 88 ETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE--GNLLASGGDD 165 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d 165 (335)
...........+...+....+++ .++.|++++.|+.+++||+...........+|...+..++|+++ ..++++++.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred cccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCC
Confidence 99998888888889999999999 89999999999999999998766666667789999999999885 4578999999
Q ss_pred CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCC
Q 019847 166 NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHH 245 (335)
Q Consensus 166 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (335)
+.|++||++. .+.+..+.+|.++|.+++|+|++. ++++++ .|+.|++||+++.+.+..+..+..+.++.|+|++
T Consensus 195 ~~i~i~d~~~---~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 195 KLVKVWNLAN---CKLKTNHIGHTGYLNTVTVSPDGS-LCASGG--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp SCEEEEETTT---TEEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred CEEEEEECCC---CceeeEecCCCCcEEEEEECCCCC-EEEEEe--CCCeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 9999999876 455777888999999999999996 455555 8999999999999999999999999999999998
Q ss_pred ceeeeeeeeeeecCCCeEEEEECCCCceeecc---------cCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 246 KEILSGHGFSASGDGNKLCLWKYPNMTKVGEL---------QSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
..++. +.|+.|++||++++..+..+ ..|...|++++|+|++++|++|+.||.|++||+.++.
T Consensus 269 ~~~~~-------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 269 YWLCA-------ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp SEEEE-------EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ceeec-------cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 76654 35999999999987766554 3678899999999999999999999999999998865
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.5e-45 Score=300.97 Aligned_cols=269 Identities=18% Similarity=0.327 Sum_probs=238.7
Q ss_pred eEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEe
Q 019847 50 KLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHD 129 (335)
Q Consensus 50 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d 129 (335)
....+.+|...|++++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+| ++++|++|+.|+.+++|+
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYN 125 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 4556789999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cccCC---eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEE
Q 019847 130 VRVSN---NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLA 206 (335)
Q Consensus 130 ~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 206 (335)
+.+.. .....+.+|.+.|.++.|++++. +++++.|+.|++||+++. ..+..+.+|.+.|.+++|+|++. +++
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~l~ 200 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG---QQTTTFTGHTGDVMSLSLAPDTR-LFV 200 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC---cEEEEEcCCCCceEEEEECCCCC-EEE
Confidence 98654 34566788999999999998865 889999999999998764 45777889999999999999986 555
Q ss_pred EecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC--CCCc
Q 019847 207 TGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS--SNSR 283 (335)
Q Consensus 207 ~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~ 283 (335)
+++ .|+.|++||+++++++..+.. ...+.+++|+|++.+++++ +.|+.|++||+++++.+..+.. +...
T Consensus 201 sg~--~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~------s~d~~v~iwd~~~~~~~~~~~~~~~~~~ 272 (340)
T 1got_B 201 SGA--CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATG------SDDATCRLFDLRADQELMTYSHDNIICG 272 (340)
T ss_dssp EEE--TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEE------ETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred EEe--CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEE------cCCCcEEEEECCCCcEEEEEccCCcccc
Confidence 555 899999999999999888875 4589999999999999887 7899999999999888766643 3357
Q ss_pred eeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 284 ILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 284 i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
|++++|+|++++|++|+.||.|++||+...+......+|...|.++.++
T Consensus 273 v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s 321 (340)
T 1got_B 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVT 321 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEc
Confidence 9999999999999999999999999999888777778899999888775
No 24
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-45 Score=300.38 Aligned_cols=266 Identities=21% Similarity=0.354 Sum_probs=235.0
Q ss_pred eecCCCCCceEEEEcCC----CCEEEEEECCCcEEEEeCCCcee--EeeecccccceeEeeecCCCCCEEEEeeCCCcEE
Q 019847 53 QVPGEDDYPTSVSWSHD----AKTLAVGYMDSKLQLWDAETSKL--VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSII 126 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 126 (335)
.+.+|.+.|.+++|+|+ +++|++|+.|++|++|++.+++. ...+.+|...|.+++|++ ++.++++++.|+.|+
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~-~~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISH-TLPIAASSSLDAHIR 105 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECC-CCCEEEEEeCCCcEE
Confidence 45689999999999984 67999999999999999987654 456889999999999999 899999999999999
Q ss_pred EEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEE
Q 019847 127 NHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLA 206 (335)
Q Consensus 127 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 206 (335)
+||+++++. ...+..|...+.+++|+|++++|++++.||.|++||++.. +....+..+...+.+++|+|+++.+ +
T Consensus 106 lWd~~~~~~-~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~---~~~~~~~~~~~~v~~~~~spdg~~l-a 180 (321)
T 3ow8_A 106 LWDLENGKQ-IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG---KKEYSLDTRGKFILSIAYSPDGKYL-A 180 (321)
T ss_dssp EEETTTTEE-EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC---SEEEEEECSSSCEEEEEECTTSSEE-E
T ss_pred EEECCCCCE-EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC---ceeEEecCCCceEEEEEECCCCCEE-E
Confidence 999986654 5567788889999999999999999999999999998764 3456667788899999999999754 4
Q ss_pred EecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCcee
Q 019847 207 TGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRIL 285 (335)
Q Consensus 207 ~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~ 285 (335)
+++ .|+.|++||+++++.+..++. ..++.+++|+|++++++++ +.|+.|++||+++++....+.+|...|.
T Consensus 181 sg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~------s~dg~i~iwd~~~~~~~~~~~~h~~~v~ 252 (321)
T 3ow8_A 181 SGA--IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTA------SDDGYIKIYDVQHANLAGTLSGHASWVL 252 (321)
T ss_dssp EEE--TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEE------CTTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEc--CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEE------cCCCeEEEEECCCcceeEEEcCCCCceE
Confidence 554 799999999999999988875 4589999999999999887 7899999999999999999999999999
Q ss_pred EeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 286 DLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 286 ~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
+++|+|++++|++++.||.|++||+..++....+.+|...|.++.++
T Consensus 253 ~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s 299 (321)
T 3ow8_A 253 NVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYN 299 (321)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEEC
Confidence 99999999999999999999999999988777778898888888775
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.3e-45 Score=309.61 Aligned_cols=287 Identities=16% Similarity=0.204 Sum_probs=246.8
Q ss_pred CcccccceeeeecCCceEEEecCCeEEEEEecCCc----eeeEEeecCCCCCceEEEEcCC----C---CEEEEEECCCc
Q 019847 13 LMEDYYSKVIDWGRNNVLAVALGPVLFLWKWENGK----VKKLLQVPGEDDYPTSVSWSHD----A---KTLAVGYMDSK 81 (335)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~----~~~~~~~~~~~~~v~~~~~~~~----~---~~l~~~~~dg~ 81 (335)
..+...+.+++|+++.+++++.|+.|++|++++++ ......+.+|...|.+++|+|+ + ++|++++.||.
T Consensus 13 ~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~ 92 (397)
T 1sq9_A 13 KAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGD 92 (397)
T ss_dssp SCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSC
T ss_pred hhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCC
Confidence 34667899999999888889999999999999887 2234455689999999999999 9 99999999999
Q ss_pred EEEEeCCCcee-----Eeeeccc-----ccceeEeeec----CCCCCE-EEEeeCCCcEEEEeccc------CCeee---
Q 019847 82 LQLWDAETSKL-----VRNLEGH-----HRRVATSSWN----HWNGHI-LTSGSKDKSIINHDVRV------SNNVT--- 137 (335)
Q Consensus 82 i~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~-l~~~~~dg~i~~~d~~~------~~~~~--- 137 (335)
|++||+.+++. ...+..| ...|.+++|+ | +++. |++++.||.|++||++. ...+.
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 171 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP 171 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccccceeeccC
Confidence 99999998886 8888888 5999999999 8 8888 99999999999999987 44332
Q ss_pred -EEe-------ecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccC---C---CCCeeEEEecCCCCc
Q 019847 138 -SCI-------KAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTD---H---CGGVKALAWSPHQVN 203 (335)
Q Consensus 138 -~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~ 203 (335)
..+ ..|...|.+++|+|++ +|++++.||.|++||++.. +.+..+.. | ...|.+++|+|++..
T Consensus 172 ~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~ 247 (397)
T 1sq9_A 172 TLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTL---RPLYNFESQHSMINNSNSIRSVKFSPQGSL 247 (397)
T ss_dssp EEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT---EEEEEEECCC---CCCCCEEEEEECSSTTE
T ss_pred cceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC---ceeEEEeccccccccCCccceEEECCCCCE
Confidence 034 4588999999999999 9999999999999998864 45666666 8 899999999999865
Q ss_pred EEEEecCCCC---CeEEEEECCCCceEEEeec--------------CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEE
Q 019847 204 VLATGGGRED---GCIKIWNVQKGTCIHGIDA--------------KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLW 266 (335)
Q Consensus 204 ~~~~~~g~~d---~~i~i~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 266 (335)
+++ ++ .| +.|++||+++++.+..+.. ...+.+++|+|++++++++ +.|+.|++|
T Consensus 248 l~~-~~--~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------~~dg~i~iw 318 (397)
T 1sq9_A 248 LAI-AH--DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA------GWDGKLRFW 318 (397)
T ss_dssp EEE-EE--EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE------ETTSEEEEE
T ss_pred EEE-Ee--cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEE------eCCCeEEEE
Confidence 554 44 68 9999999999999888874 5689999999999999887 679999999
Q ss_pred ECCCCceeeccc------CC---------------CCceeEeEEcCCC----------CEEEEEeCCCcEEEEecCCC
Q 019847 267 KYPNMTKVGELQ------SS---------------NSRILDLSQSPDG----------LTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 267 d~~~~~~~~~~~------~~---------------~~~i~~~~~~~~~----------~~l~~~~~dg~v~iw~~~~~ 313 (335)
|+.+++.+..+. .| ...|++++|+|++ ++|++++.||.|++|++.++
T Consensus 319 d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 319 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 999999999998 78 8999999999998 79999999999999999875
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.3e-44 Score=325.85 Aligned_cols=283 Identities=21% Similarity=0.345 Sum_probs=241.6
Q ss_pred cccccceeeeecCC---ceEEEecCCeEEEEEecCCce---eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 14 MEDYYSKVIDWGRN---NVLAVALGPVLFLWKWENGKV---KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 14 ~~~~~~~~~~~~~~---~~~~~~~~~~i~vw~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
.+...+++++|+++ .+++++.|+.|++|++.+... .....+.+|...|.+++|+|++++|++|+.||.|++||+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~ 459 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 459 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 35667899999863 477788999999999976432 234566799999999999999999999999999999999
Q ss_pred CCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE---eecCCCCEEEEEeecCC--CEEEEE
Q 019847 88 ETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC---IKAHSGEVCGLKWSNEG--NLLASG 162 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~i~~~~~~~~~--~~l~~~ 162 (335)
.+++....+.+|...|.+++|+| +++.|++++.|++|++||...... ... ..+|...|.+++|+|++ ..++++
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 99999999999999999999999 999999999999999999864322 222 24688899999999976 689999
Q ss_pred eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeC
Q 019847 163 GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWN 242 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 242 (335)
+.|+.|++||++.. +....+.+|.+.|.+++|+|++. ++++++ .|+.|++||+++++.+..+..+..+.+++|+
T Consensus 538 s~d~~v~vwd~~~~---~~~~~~~~h~~~v~~v~~spdg~-~l~sg~--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s 611 (694)
T 3dm0_A 538 SWDKTVKVWNLSNC---KLRSTLAGHTGYVSTVAVSPDGS-LCASGG--KDGVVLLWDLAEGKKLYSLEANSVIHALCFS 611 (694)
T ss_dssp ETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSS-EEEEEE--TTSBCEEEETTTTEEEECCBCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCC---cEEEEEcCCCCCEEEEEEeCCCC-EEEEEe--CCCeEEEEECCCCceEEEecCCCcEEEEEEc
Confidence 99999999998763 45677888999999999999996 555555 8999999999999999998888899999999
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCC-------------------CceeEeEEcCCCCEEEEEeCCC
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSN-------------------SRILDLSQSPDGLTVATAGADE 303 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------------------~~i~~~~~~~~~~~l~~~~~dg 303 (335)
|++..++++ .++.|++||+.+++.+..+..+. ..+++++|+|+|++|++|+.||
T Consensus 612 p~~~~l~~~-------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg 684 (694)
T 3dm0_A 612 PNRYWLCAA-------TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDG 684 (694)
T ss_dssp SSSSEEEEE-------ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTS
T ss_pred CCCcEEEEE-------cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCC
Confidence 999888765 36779999999988877654321 1378899999999999999999
Q ss_pred cEEEEecC
Q 019847 304 TIRFWEAF 311 (335)
Q Consensus 304 ~v~iw~~~ 311 (335)
.|++|++.
T Consensus 685 ~i~iW~i~ 692 (694)
T 3dm0_A 685 VIRVWGIG 692 (694)
T ss_dssp EEEEEEC-
T ss_pred eEEEEecc
Confidence 99999985
No 27
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-45 Score=312.52 Aligned_cols=294 Identities=16% Similarity=0.213 Sum_probs=235.8
Q ss_pred ccccceeeeecC--C-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC-CCCEEEEEECCCcEEEEeCCCc
Q 019847 15 EDYYSKVIDWGR--N-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH-DAKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 15 ~~~~~~~~~~~~--~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~ 90 (335)
++..++|++|+| + .+++++.||.|+|||+.+++......+.+|...|++++|+| ++++|++|+.||+|++||++++
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 455699999997 2 35667789999999999888777777889999999999998 7899999999999999999876
Q ss_pred eeEeeec--ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCC-EEEEEeCCCe
Q 019847 91 KLVRNLE--GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGN-LLASGGDDNV 167 (335)
Q Consensus 91 ~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~ 167 (335)
....... .+...+.+++|+| ++.+|++|+.||.|++||++. + ....+.+|...|.+++|+|++. +|++++.|+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~-~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDG-K-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQT 274 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSS-C-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSB
T ss_pred ceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCc-c-eeEEEecccceEEeeeecCCCceEEEEecCcce
Confidence 5443333 2345678999999 999999999999999999863 3 3455778999999999999765 7889999999
Q ss_pred EEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCC-------cEeEEE
Q 019847 168 VRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKA-------QICGLE 240 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~~ 240 (335)
|++||++.......+....+|..+|++++|+|++..+++ ++ .|+.|++||+++++....+..+. ......
T Consensus 275 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s-~~--~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (435)
T 4e54_B 275 VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLT-TD--QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAA 351 (435)
T ss_dssp CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEE-EE--SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCE
T ss_pred eeEEecccccccceEEEeeeccccccceeECCCCCeeEE-Ec--CCCEEEEEECCCCccceEEecccccccccceeEEEE
Confidence 999999886655555566789999999999999975555 44 79999999999988776664321 244567
Q ss_pred eCCCCceeeeeee------eeeecCCCeEEEEECCCCceeeccc-CCCCceeEe-EEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 241 WNRHHKEILSGHG------FSASGDGNKLCLWKYPNMTKVGELQ-SSNSRILDL-SQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 241 ~~~~~~~~~~~~~------~~~~~~~~~i~i~d~~~~~~~~~~~-~~~~~i~~~-~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
|+|++..++++.. +..+.+++.|++||..+++.+..+. +|...|.++ +|+|+|++|++|+ |+.|+||+++.
T Consensus 352 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~ 430 (435)
T 4e54_B 352 WHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQE 430 (435)
T ss_dssp ECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-
T ss_pred EcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCc
Confidence 7888877776532 2233456789999999999988764 677888887 6999999999876 78999999987
Q ss_pred CCC
Q 019847 313 PSG 315 (335)
Q Consensus 313 ~~~ 315 (335)
++.
T Consensus 431 gk~ 433 (435)
T 4e54_B 431 ART 433 (435)
T ss_dssp ---
T ss_pred Cee
Confidence 754
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-43 Score=295.39 Aligned_cols=289 Identities=15% Similarity=0.203 Sum_probs=253.5
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+.+++|+++ .+++++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL--GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhh--hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 5667899999984 4666778999999999988764 45668999999999999999999999999999999999999
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCC-----CcEEEEecccCCe----------eeEEeecCCC--CEEEEEeecC
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKD-----KSIINHDVRVSNN----------VTSCIKAHSG--EVCGLKWSNE 155 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~----------~~~~~~~~~~--~i~~~~~~~~ 155 (335)
+..+. +...+.+++|+| ++..+++++.+ +.|++||++.... ....+..|.. .+.+++|+|+
T Consensus 109 ~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 109 VATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp EEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred EEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 98888 889999999999 99999999999 9999999986542 2334455666 8999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCc
Q 019847 156 GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQ 235 (335)
Q Consensus 156 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~ 235 (335)
+++|++++.||.|++||++.. ...+..+..|...|.+++|+|++..+++. + .|+.|++||+++++.+..+.....
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~--~d~~i~v~d~~~~~~~~~~~~~~~ 261 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNN--YEYVDSIDLHEKSISDMQFSPDLTYFITS-S--RDTNSFLVDVSTLQVLKKYETDCP 261 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTT--TEEEEEEECCSSCEEEEEECTTSSEEEEE-E--TTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCEEEEEcCCCEEEEEECCCC--cEeEEEEecCCCceeEEEECCCCCEEEEe-c--CCceEEEEECCCCceeeeecCCCC
Confidence 999999999999999998763 34567777899999999999999755554 4 799999999999999999999999
Q ss_pred EeEEEeCCCCceeeeeeeeeeecCCC--------------eEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeC
Q 019847 236 ICGLEWNRHHKEILSGHGFSASGDGN--------------KLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGA 301 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 301 (335)
+..++|+|++++++++ +.++ .+++||..+++.+..+.+|...|++++|+|++++|++++.
T Consensus 262 ~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 262 LNTAVITPLKEFIILG------GGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp EEEEEECSSSSEEEEE------ECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ceeEEecCCCceEEEe------ecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence 9999999999999987 3344 8999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCCCCCCC
Q 019847 302 DETIRFWEAFGPSGDED 318 (335)
Q Consensus 302 dg~v~iw~~~~~~~~~~ 318 (335)
||.|++|++.......+
T Consensus 336 dg~v~iw~~~~~~~~~~ 352 (369)
T 3zwl_B 336 DGFIRLHHFEKSYFDFK 352 (369)
T ss_dssp TSEEEEEEECHHHHTCC
T ss_pred CCeEEEEECccccchhH
Confidence 99999999987654433
No 29
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-45 Score=312.64 Aligned_cols=290 Identities=19% Similarity=0.355 Sum_probs=246.3
Q ss_pred ccceeeeecCC-c-eEEE-----------ecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEE
Q 019847 17 YYSKVIDWGRN-N-VLAV-----------ALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQ 83 (335)
Q Consensus 17 ~~~~~~~~~~~-~-~~~~-----------~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 83 (335)
..+.+++|+++ . ++++ +.|+.|++||+.+++..+......|...|.+++|+|++++|++|+.||.|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 46778999985 3 5554 478899999999876432333346889999999999999999999999999
Q ss_pred EEeCCC----ceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC------eee--EEeecCCCCEEEEE
Q 019847 84 LWDAET----SKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN------NVT--SCIKAHSGEVCGLK 151 (335)
Q Consensus 84 iw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~------~~~--~~~~~~~~~i~~~~ 151 (335)
+||+.+ .+.+..+..|...|.+++|+|.++++|++++.||.|++||+++.. ... .....|...|.+++
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 172 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA 172 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence 999987 457888899999999999999438999999999999999998765 222 22457899999999
Q ss_pred eecC-CCEEEEEeCCCeEEEEEccCCCcccceeeccCC------CCCeeEEEecCCCCcEEEEecCCCCC---eEEEEEC
Q 019847 152 WSNE-GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDH------CGGVKALAWSPHQVNVLATGGGREDG---CIKIWNV 221 (335)
Q Consensus 152 ~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~g~~d~---~i~i~d~ 221 (335)
|+|+ +.+|++++.||.|++||++... .+..+..+ ...+.+++|+|++..++++++ .|+ .|++||+
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKK---EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT--GSDNDPSILIWDL 247 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTE---EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE--CCSSSCCCCEEET
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCC---cceEEeccccccccCCceEEEEECCCCCCEEEEEE--CCCCCceEEEEeC
Confidence 9998 7899999999999999988743 34444444 788999999999877888876 787 9999999
Q ss_pred CCC-ceEEEee--cCCcEeEEEeCC-CCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCC-CEE
Q 019847 222 QKG-TCIHGID--AKAQICGLEWNR-HHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDG-LTV 296 (335)
Q Consensus 222 ~~~-~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l 296 (335)
+++ +++..+. +...+.+++|+| ++.+++++ +.|+.|++||+.+++++..+..|...|++++|+|++ .+|
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~------~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSS------GRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEE------ESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEE------eCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEE
Confidence 986 5666665 567899999999 88888887 679999999999999999999999999999999998 899
Q ss_pred EEEeCCCcEEEEecCCCCCCC
Q 019847 297 ATAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 297 ~~~~~dg~v~iw~~~~~~~~~ 317 (335)
++++.||.|++|++.......
T Consensus 322 ~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp EECCSSSEEEEEESCCCCCSS
T ss_pred EEEecCCcEEEEEccCCCCCc
Confidence 999999999999999876544
No 30
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-43 Score=299.36 Aligned_cols=283 Identities=15% Similarity=0.190 Sum_probs=231.2
Q ss_pred cccccceeeeecCC---ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC-CCCEEEEEECCCcEEEEeCCC
Q 019847 14 MEDYYSKVIDWGRN---NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH-DAKTLAVGYMDSKLQLWDAET 89 (335)
Q Consensus 14 ~~~~~~~~~~~~~~---~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~ 89 (335)
.+...+.+++|+++ .+++++.|+.|++||+.+++....+...+|...|.+++|+| ++++|++++.||.|++||+++
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 34567899999985 36677789999999999998877777678999999999999 789999999999999999986
Q ss_pred ceeEeeecc---cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCC-EEEEEeCC
Q 019847 90 SKLVRNLEG---HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGN-LLASGGDD 165 (335)
Q Consensus 90 ~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d 165 (335)
+.+..+.. +...|.+++|+| ++++|++++.|+.|++||++ ++ ....+..|...|.+++|+|+++ +|++++.|
T Consensus 151 -~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 226 (383)
T 3ei3_B 151 -SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GH-EIFKEKLHKAKVTHAEFNPRCDWLMATSSVD 226 (383)
T ss_dssp -CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SC-EEEEEECSSSCEEEEEECSSCTTEEEEEETT
T ss_pred -CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CC-EEEEeccCCCcEEEEEECCCCCCEEEEEeCC
Confidence 44555543 347899999999 99999999999999999994 33 4666788999999999999998 99999999
Q ss_pred CeEEEEEccCCCcccceeeccCCCCCeeEEEecC-CCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-----------
Q 019847 166 NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSP-HQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK----------- 233 (335)
Q Consensus 166 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~----------- 233 (335)
+.|++||++............+|...|.+++|+| ++..+ ++++ .|+.|++||+++++....+..+
T Consensus 227 ~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (383)
T 3ei3_B 227 ATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKL-LTTD--QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPI 303 (383)
T ss_dssp SEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEE-EEEE--SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCC
T ss_pred CEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEE-EEEc--CCCcEEEEECCCCccccccccccccccccccce
Confidence 9999999987543222333336999999999999 88655 4554 7999999999988776655422
Q ss_pred -------CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC--CCCceeEeEEcCCCCEEEEEeCCCc
Q 019847 234 -------AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS--SNSRILDLSQSPDGLTVATAGADET 304 (335)
Q Consensus 234 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 304 (335)
..+..++++|++++ + ++.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++++ ||.
T Consensus 304 ~~~~~p~~~~~~~~~s~dg~~--s------~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 304 KATWHPMYDLIVAGRYPDDQL--L------LNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp CCEECSSSSEEEEECBCCTTT--C------TTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred EEeccCCCCceEEEecCCccc--c------cCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 22333555555554 3 37899999999999999999886 456777889999999999997 999
Q ss_pred EEEEecCC
Q 019847 305 IRFWEAFG 312 (335)
Q Consensus 305 v~iw~~~~ 312 (335)
|++||+++
T Consensus 375 i~iw~~~~ 382 (383)
T 3ei3_B 375 ILIWNRED 382 (383)
T ss_dssp EEEEECC-
T ss_pred EEEEecCC
Confidence 99999875
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2e-43 Score=294.42 Aligned_cols=271 Identities=16% Similarity=0.300 Sum_probs=238.2
Q ss_pred eEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEe
Q 019847 50 KLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHD 129 (335)
Q Consensus 50 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d 129 (335)
....+.+|...|++++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+| ++..|++|+.|+.+++|+
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEE
Confidence 3456779999999999999999999999999999999999999999988999999999999 999999999999999999
Q ss_pred cccCC-----eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCC-Cc
Q 019847 130 VRVSN-----NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQ-VN 203 (335)
Q Consensus 130 ~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~ 203 (335)
+.... .....+..|...|.+++|+|++..|++++.|++|++||++++ +.+..+.+|...|.+++|+|+. ..
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG---QLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC---CEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC---eEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 86432 234556789999999999999999999999999999998764 4577888999999999998853 25
Q ss_pred EEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC--
Q 019847 204 VLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-- 280 (335)
Q Consensus 204 ~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-- 280 (335)
++++++ .|+.|++||+++++++..+.. ...+.+++|+|++..++++ +.|+.|++||+++.+.+..+..+
T Consensus 212 ~l~sgs--~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~------s~D~~v~lwd~~~~~~~~~~~~~~~ 283 (354)
T 2pbi_B 212 TFVSGG--CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASG------SDDATCRLYDLRADREVAIYSKESI 283 (354)
T ss_dssp EEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE------ETTSCEEEEETTTTEEEEEECCTTC
T ss_pred EEEEEe--CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEE------eCCCeEEEEECCCCcEEEEEcCCCc
Confidence 666766 899999999999999988875 5689999999999999887 78999999999998877666543
Q ss_pred CCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 281 NSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 281 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
...+.+++|+|++++|++|+.|+.|++||+..++......+|...|.++.++
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~s 335 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVS 335 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEEC
Confidence 3468999999999999999999999999998887777777899999888875
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.2e-43 Score=289.60 Aligned_cols=270 Identities=21% Similarity=0.371 Sum_probs=236.8
Q ss_pred eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEE
Q 019847 49 KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINH 128 (335)
Q Consensus 49 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~ 128 (335)
.....+.+|...|++++|+|++++|++|+.||.|++|++.+++....+..|...|.+++|+| ++++|++++.|+.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEE
Confidence 34567789999999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEe
Q 019847 129 DVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATG 208 (335)
Q Consensus 129 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 208 (335)
|+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||+++. +.+..+..|..+|.+++|+|++..+ +++
T Consensus 93 d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l-~~~ 167 (312)
T 4ery_A 93 DVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTG---KCLKTLPAHSDPVSAVHFNRDGSLI-VSS 167 (312)
T ss_dssp ETTTCCE-EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC---CEEEEECCCSSCEEEEEECTTSSEE-EEE
T ss_pred ECCCCcE-EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC---EEEEEecCCCCcEEEEEEcCCCCEE-EEE
Confidence 9987654 5667889999999999999999999999999999998764 4567778899999999999998654 555
Q ss_pred cCCCCCeEEEEECCCCceEEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeE
Q 019847 209 GGREDGCIKIWNVQKGTCIHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILD 286 (335)
Q Consensus 209 ~g~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 286 (335)
+ .|+.|++||+++++.+..+.. ..++..++|+|++++++++ +.|+.|++||+.+++.+..+.+|......
T Consensus 168 ~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 239 (312)
T 4ery_A 168 S--YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAA------TLDNTLKLWDYSKGKCLKTYTGHKNEKYC 239 (312)
T ss_dssp E--TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEE------ETTTEEEEEETTTTEEEEEECSSCCSSSC
T ss_pred e--CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEE------cCCCeEEEEECCCCcEEEEEEecCCceEE
Confidence 4 799999999999998877643 4578999999999999887 67999999999999999999888765433
Q ss_pred e--EE-cCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 287 L--SQ-SPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 287 ~--~~-~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
+ .+ .+++.+|++|+.||.|++||+..++......+|.+.|.++.+.
T Consensus 240 ~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 288 (312)
T 4ery_A 240 IFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACH 288 (312)
T ss_dssp CCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeec
Confidence 2 33 4678899999999999999999988777778888888777663
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=293.96 Aligned_cols=247 Identities=16% Similarity=0.252 Sum_probs=209.0
Q ss_pred cccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEE--eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 16 DYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLL--QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+..+.+++|+++ .+++++.||.|+|||+++++..... ...+|...|++++|+|++++|++|+.||.|++||+++++.
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV 161 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 346889999985 6778889999999999998765443 3468999999999999999999999999999999999999
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE-eecCCCCEEEEEeec-CCCEEEEEeCCCeEEE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC-IKAHSGEVCGLKWSN-EGNLLASGGDDNVVRI 170 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i 170 (335)
+..+.+|...|.+++|++.+..+|++++.|+.|++||+++++..... ...+...+.+++|+| ++++|++|+.||.|++
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEE
Confidence 99999999999999999955578999999999999999977764433 234566799999999 5678999999999999
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceee-
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEIL- 249 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (335)
||+++. +.+..+.+|...|++++|+|++..++++++ .|++|++||+++++++....+...|.+++|+|+++.++
T Consensus 242 wd~~~~---~~~~~~~~h~~~v~~v~fsp~g~~~lasgs--~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~lla 316 (344)
T 4gqb_B 242 VDTKST---SCVLSSAVHSQCVTGLVFSPHSVPFLASLS--EDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLT 316 (344)
T ss_dssp EESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEE--TTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEE
T ss_pred EECCCC---cEEEEEcCCCCCEEEEEEccCCCeEEEEEe--CCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEE
Confidence 998864 457778899999999999999987888877 89999999999998876666677999999999998654
Q ss_pred eeeeeeeecCCCeEEEEECCCCce
Q 019847 250 SGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 250 ~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
++ +.|+.|++|++.+...
T Consensus 317 s~------s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 317 TV------GWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EE------ETTSCEEEEECCC---
T ss_pred EE------cCCCeEEEEECCCCCC
Confidence 44 7799999999976543
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-42 Score=287.78 Aligned_cols=282 Identities=20% Similarity=0.252 Sum_probs=240.7
Q ss_pred cccccceeeeecCC-ceEEEecCCeEEEEEecCCcee---eEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC
Q 019847 14 MEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVK---KLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET 89 (335)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 89 (335)
.+...+.+++|+++ .+++++.|+.|++||+++++.. ......+|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA 128 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 35667889999984 5666666999999999876532 2333347899999999999999999999999999999998
Q ss_pred ce--eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCe
Q 019847 90 SK--LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 90 ~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
++ ....+..|...+.+++|+| +++++++++.||.|++||+++.+ ....+..|...+.+++|+|++++|++++.||.
T Consensus 129 ~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 206 (337)
T 1gxr_A 129 PTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQT-LVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred CCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCc-eeeeeecccCceEEEEECCCCCEEEEEecCCc
Confidence 87 5667788999999999999 99999999999999999998654 46667789999999999999999999999999
Q ss_pred EEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCce
Q 019847 168 VRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKE 247 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (335)
|++||++... .+..+ .+...+.+++|+|++..+++ ++ .++.|++||+++++......+...+.+++|+|++++
T Consensus 207 i~~~d~~~~~---~~~~~-~~~~~v~~~~~s~~~~~l~~-~~--~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 207 VRSWDLREGR---QLQQH-DFTSQIFSLGYCPTGEWLAV-GM--ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp EEEEETTTTE---EEEEE-ECSSCEEEEEECTTSSEEEE-EE--TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEECCCCc---eEeee-cCCCceEEEEECCCCCEEEE-Ec--CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCE
Confidence 9999988643 33333 36788999999999975555 44 799999999999887766667789999999999999
Q ss_pred eeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 248 ILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 248 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
++++ +.|+.|++||+.+++.+... .|...+.+++|+|++++|++++.||.|++|++.
T Consensus 280 l~~~------~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 280 FVST------GKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEE------ETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred EEEe------cCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 9887 67999999999999887543 577889999999999999999999999999974
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-44 Score=302.47 Aligned_cols=291 Identities=16% Similarity=0.196 Sum_probs=216.9
Q ss_pred eeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC------CCcEEEEeCCCceeEe
Q 019847 22 IDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM------DSKLQLWDAETSKLVR 94 (335)
Q Consensus 22 ~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~~~ 94 (335)
++...+ .++....+.....|++.... ...|...|++++|+|||++||+|+. |+.|++|+..++....
T Consensus 11 ~d~g~~~~~~~~~g~~~~~~w~~p~~~------p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~ 84 (357)
T 4g56_B 11 VDLGTENLYFQSNGSSKGSAWGRPVTA------PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE 84 (357)
T ss_dssp -----------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CG
T ss_pred CCCCccceEEecCCCccccccCCCCCC------cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcce
Confidence 444443 35555567788999875433 2469999999999999999999997 7889999988765433
Q ss_pred ----eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeee---EEeecCCCCEEEEEeecCCCEEEEEeCCCe
Q 019847 95 ----NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVT---SCIKAHSGEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 95 ----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
....|...|.+++|+| ++. +++++.||+|++||+.+++... ....+|...|++++|+|++++|++++.|+.
T Consensus 85 ~~~~~~~~~~~~V~~~~~s~-d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~ 162 (357)
T 4g56_B 85 SLCTAGVQTEAGVTDVAWVS-EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFS 162 (357)
T ss_dssp GGCSEEEECSSCEEEEEEET-TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred eEecccCCCCCCEEEEEEcC-CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 3346888999999999 665 5567889999999998765432 234579999999999999999999999999
Q ss_pred EEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec---CCcEeEEEeCCC
Q 019847 168 VRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA---KAQICGLEWNRH 244 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~ 244 (335)
|++||+++ .+.+..+.+|...|.+++|+|++..++++++ .|+.|++||++++++...+.. ...+.+++|+|+
T Consensus 163 v~iwd~~~---~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 163 VKVWDLSQ---KAVLKSYNAHSSEVNCVAACPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp EEEEETTT---TEEEEEECCCSSCEEEEEECTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred EEEEECCC---CcEEEEEcCCCCCEEEEEEccCCCceeeeec--cCCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 99999876 4567788899999999999999987777776 899999999999987766543 457999999998
Q ss_pred Cc-eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCCcccc
Q 019847 245 HK-EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDG-LTVATAGADETIRFWEAFGPSGDEDSVSH 322 (335)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~iw~~~~~~~~~~~~~~ 322 (335)
+. +++++ +.|+.|++||+++++.+..+..|...|++++|+|++ ++|++|+.||.|+|||+..++... ..+|
T Consensus 238 ~~~~la~g------~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~-~~~H 310 (357)
T 4g56_B 238 KDDTFACG------DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR-DLSH 310 (357)
T ss_dssp STTEEEEE------ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE-ECCC
T ss_pred ccceEEEe------ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE-ECCC
Confidence 65 55555 679999999999999999999999999999999987 689999999999999998875543 4589
Q ss_pred ccccccceec
Q 019847 323 LAGLVSLKTS 332 (335)
Q Consensus 323 ~~~i~~~~~~ 332 (335)
.+.|.++.|+
T Consensus 311 ~~~V~~vafs 320 (357)
T 4g56_B 311 RDFVTGVAWS 320 (357)
T ss_dssp SSCEEEEEEC
T ss_pred CCCEEEEEEe
Confidence 9999988875
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.7e-43 Score=310.65 Aligned_cols=273 Identities=24% Similarity=0.498 Sum_probs=239.8
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+.+++|+++ .+++++.|+.|++||....+ ...+.+|...|.+++|+|++++|++++.||.|++||. +++.
T Consensus 302 h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~---~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~ 377 (577)
T 2ymu_A 302 HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH---LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQL 377 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCE---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCE
T ss_pred CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe---eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCE
Confidence 3456778888874 56777899999999987654 3456789999999999999999999999999999995 5778
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWE 172 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 172 (335)
+..+..|...|.+++|+| ++++|++++.|+.|++||.. + .....+.+|...|++++|+|++++|++++.|+.|++||
T Consensus 378 ~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~~-~-~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~ 454 (577)
T 2ymu_A 378 LQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRN-G-QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN 454 (577)
T ss_dssp EEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECTT-C-CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCC-C-CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 888999999999999999 99999999999999999964 3 44667889999999999999999999999999999999
Q ss_pred ccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeee
Q 019847 173 RSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (335)
.. .+.+..+.+|...|.+++|+|+++.+ ++++ .|+.|++||. +++++..+.. ...+.+++|+|++++++++
T Consensus 455 ~~----~~~~~~~~~~~~~v~~~~~spd~~~l-as~~--~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 455 RN----GQLLQTLTGHSSSVRGVAFSPDGQTI-ASAS--DDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 526 (577)
T ss_dssp TT----SCEEEEEECCSSCEEEEEECTTSCEE-EEEE--TTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CC----CCEEEEEcCCCCCEEEEEEcCCCCEE-EEEe--CCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEE
Confidence 64 24567778899999999999999754 4544 7999999995 6778887775 4689999999999999887
Q ss_pred eeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEe
Q 019847 252 HGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWE 309 (335)
Q Consensus 252 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~ 309 (335)
+.|+.|++||. +++++..+.+|.+.|++++|+||+++|++++.|+.|++||
T Consensus 527 ------~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 527 ------SDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ------ETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ------ECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 77999999995 6788899999999999999999999999999999999997
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.2e-43 Score=291.62 Aligned_cols=274 Identities=21% Similarity=0.358 Sum_probs=226.9
Q ss_pred eeEEeecCCCC-CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe---eecccccceeEeeecCCCCCEEEEeeCCCc
Q 019847 49 KKLLQVPGEDD-YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR---NLEGHHRRVATSSWNHWNGHILTSGSKDKS 124 (335)
Q Consensus 49 ~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 124 (335)
.....+++|.. .|.+++|+|+|++||+|+.|+.|+|||+++++... ...+|...|.+++|+| ++++|++|+.|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP-CGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECT-TSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECC-CCCEEEEEECCCc
Confidence 34556778987 99999999999999999999999999998876432 2367999999999999 9999999999999
Q ss_pred EEEEecccCC-eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCc
Q 019847 125 IINHDVRVSN-NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVN 203 (335)
Q Consensus 125 i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 203 (335)
+++||+.... .....+.+|...|.+++|+|++++|++++.|+.|++||++.......+..+.+|...|.+++|+|++..
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9999997654 345678899999999999999999999999999999999876655667778899999999999999975
Q ss_pred EEEEecCCCCCeEEEEECCCCce--EEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCC---------
Q 019847 204 VLATGGGREDGCIKIWNVQKGTC--IHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNM--------- 271 (335)
Q Consensus 204 ~~~~~~g~~d~~i~i~d~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~--------- 271 (335)
+ ++++ .|+.|++||.++++. ...+.. ...|.+++|+|++++++++ +.|+.|++||....
T Consensus 165 l-~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~------s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 165 L-ASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC------SDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp E-EEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE------ETTSCEEEEEEECTTCTTCCCCC
T ss_pred E-EEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE------eCCCeEEEeccccCCCCccceee
Confidence 4 4554 899999999988754 345543 5689999999999999888 78999999996332
Q ss_pred ------ceeecccC-CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCC---------ccccccccccceec
Q 019847 272 ------TKVGELQS-SNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDED---------SVSHLAGLVSLKTS 332 (335)
Q Consensus 272 ------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~---------~~~~~~~i~~~~~~ 332 (335)
+.+..+.+ |...|.+++|+|++..|++++.|+.|++|+......... ..+|...|.++.++
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 12233333 788999999999999999999999999999987543322 13677778877765
No 38
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=9.6e-43 Score=309.18 Aligned_cols=295 Identities=23% Similarity=0.441 Sum_probs=252.6
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+.+++|+++ .+++++.|+.|++|+.+. +. ...+.+|...|.+++|+|++++|++++.||.|++||... +.
T Consensus 261 ~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~--~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~-~~ 336 (577)
T 2ymu_A 261 HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QL--LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QH 336 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cE--EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC-Ce
Confidence 3456788999874 577788999999999654 33 345678999999999999999999999999999999764 45
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWE 172 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 172 (335)
+..+..|...+.+++|+| +++.|++++.|+.+++||.. + .....+..|...|.+++|+|++++|++++.|+.|++||
T Consensus 337 ~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~-~-~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 337 LQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRN-G-QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT-C-CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcCC-C-CEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 667888999999999999 99999999999999999964 3 44667788999999999999999999999999999999
Q ss_pred ccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeee
Q 019847 173 RSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (335)
.. .+.+..+.+|...|.+++|+|++..++ +++ .|+.|++||.. ++.+..+. +...+.+++|+|++++++++
T Consensus 414 ~~----~~~~~~~~~~~~~v~~~~~s~d~~~l~-~~~--~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~ 485 (577)
T 2ymu_A 414 RN----GQLLQTLTGHSSSVWGVAFSPDDQTIA-SAS--DDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASA 485 (577)
T ss_dssp TT----CCEEEEEECCSSCEEEEEECTTSSEEE-EEE--TTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEE
T ss_pred CC----CCEEEEecCCCCCeEEEEECCCCCEEE-EEc--CCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 54 345777888999999999999997554 444 79999999964 56666665 45689999999999999987
Q ss_pred eeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCcccccccccccee
Q 019847 252 HGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKT 331 (335)
Q Consensus 252 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~ 331 (335)
+.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.||.|++||.. ++....+.+|...|.++.|
T Consensus 486 ------~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~~~~~~~h~~~v~~~~f 557 (577)
T 2ymu_A 486 ------SDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAF 557 (577)
T ss_dssp ------ETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEECCSSCEEEEEE
T ss_pred ------eCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CCEEEEEcCCCCCEEEEEE
Confidence 77999999994 688889999999999999999999999999999999999964 4455567789999988887
Q ss_pred c
Q 019847 332 S 332 (335)
Q Consensus 332 ~ 332 (335)
+
T Consensus 558 s 558 (577)
T 2ymu_A 558 S 558 (577)
T ss_dssp C
T ss_pred c
Confidence 5
No 39
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.9e-43 Score=292.78 Aligned_cols=289 Identities=15% Similarity=0.224 Sum_probs=241.8
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+.+++|+++ .+++++.|+.|++||+++++......+.+|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 4557888999984 45556689999999999987555667778999999999999999999999999999999988875
Q ss_pred Eee--ecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe---eeEEeecCCCCEEEEEeecCCCEEEEEeCCCe
Q 019847 93 VRN--LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN---VTSCIKAHSGEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 93 ~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
... +..|...|.+++|+| ++++|++++.|+.|++||++.... .......|...|.+++|+|++++|++++.||.
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 444 466889999999999 899999999999999999987663 23444678999999999999999999999999
Q ss_pred EEEEEccCC---------------CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec
Q 019847 168 VRIWERSKM---------------SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA 232 (335)
Q Consensus 168 i~iwd~~~~---------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~ 232 (335)
|++||++.. .....+..+..|...|.+++|+|++..++ +++ .|+.|++||+++++.+..+..
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~--~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA-WVS--HDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE-EEE--TTTEEEEEEGGGTTEEEEEEC
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE-EEe--CCCEEEEEECCCCceeEEEcc
Confidence 999997521 12455677778999999999999997554 444 799999999999999988876
Q ss_pred C-CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC--Cc--------------------------------ee---
Q 019847 233 K-AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN--MT--------------------------------KV--- 274 (335)
Q Consensus 233 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~--~~--------------------------------~~--- 274 (335)
+ .++.+++|+|++.+++++ .|+.|++|++.+ ++ ..
T Consensus 243 ~~~~v~~~~~~~~~~~l~~~-------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (372)
T 1k8k_C 243 ETLPLLAVTFITESSLVAAG-------HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 315 (372)
T ss_dssp SSCCEEEEEEEETTEEEEEE-------TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC------
T ss_pred CCCCeEEEEEecCCCEEEEE-------eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCc
Confidence 5 489999999999987765 599999999987 32 00
Q ss_pred ---ecc-cCCCCceeEeEEc-CCC---CEEEEEeCCCcEEEEecCCCC
Q 019847 275 ---GEL-QSSNSRILDLSQS-PDG---LTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 275 ---~~~-~~~~~~i~~~~~~-~~~---~~l~~~~~dg~v~iw~~~~~~ 314 (335)
..+ .+|...|++++|. ++| .+|++|+.||.|++|++...+
T Consensus 316 ~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 316 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 233 4899999999966 666 999999999999999997643
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-43 Score=295.51 Aligned_cols=285 Identities=17% Similarity=0.246 Sum_probs=237.8
Q ss_pred ccccceeeeecC------CceEEEecCCeEEEEEecCCceeeEEe---ecCCCCCceEEEEcCC----CCEEEEEECCCc
Q 019847 15 EDYYSKVIDWGR------NNVLAVALGPVLFLWKWENGKVKKLLQ---VPGEDDYPTSVSWSHD----AKTLAVGYMDSK 81 (335)
Q Consensus 15 ~~~~~~~~~~~~------~~~~~~~~~~~i~vw~~~~~~~~~~~~---~~~~~~~v~~~~~~~~----~~~l~~~~~dg~ 81 (335)
+...+.+++|++ ..+++++.++.|++||+.+++....+. ...|...|++++|+|+ +++|++|+.||.
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~ 96 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGI 96 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCE
T ss_pred CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCE
Confidence 567889999995 247788889999999999776544333 2347789999999998 679999999999
Q ss_pred EEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEe---ecCCCCEEEEEeecCCCE
Q 019847 82 LQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCI---KAHSGEVCGLKWSNEGNL 158 (335)
Q Consensus 82 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~ 158 (335)
|++||+.+++.+..+..|...|.+++|+|.++++|++++.||.|++||+++++. ...+ ..|...|.+++|+|++++
T Consensus 97 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~ 175 (366)
T 3k26_A 97 IRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-VAIFGGVEGHRDEVLSADYDLLGEK 175 (366)
T ss_dssp EEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE-EEEECSTTSCSSCEEEEEECTTSSE
T ss_pred EEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE-EEEecccccccCceeEEEECCCCCE
Confidence 999999999999999999999999999997889999999999999999986654 4444 679999999999999999
Q ss_pred EEEEeCCCeEEEEEccCCCcccc-------------------------eeeccCCCCCeeEEEecCCCCcEEEEecCCCC
Q 019847 159 LASGGDDNVVRIWERSKMSSSKS-------------------------LHRFTDHCGGVKALAWSPHQVNVLATGGGRED 213 (335)
Q Consensus 159 l~~~~~dg~i~iwd~~~~~~~~~-------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d 213 (335)
|++++.||.|++||++....... ......|...|.+++|+ +. ++++++ .|
T Consensus 176 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~--~d 250 (366)
T 3k26_A 176 IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKS--CE 250 (366)
T ss_dssp EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEEC--SS
T ss_pred EEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEe--cC
Confidence 99999999999999876432111 12233488999999999 43 666665 89
Q ss_pred CeEEEEECCCCce--------------EEEeec-CCcEeEEEeCCC--CceeeeeeeeeeecCCCeEEEEECCCCceee-
Q 019847 214 GCIKIWNVQKGTC--------------IHGIDA-KAQICGLEWNRH--HKEILSGHGFSASGDGNKLCLWKYPNMTKVG- 275 (335)
Q Consensus 214 ~~i~i~d~~~~~~--------------~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~- 275 (335)
+.|++||+++++. +..+.. ...+.+++|+|+ +++++++ +.||.|++||+.++++..
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~------~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG------NQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE------CTTSCEEEEECCSSSGGGC
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE------ecCCcEEEEECCCCCCccc
Confidence 9999999987644 555543 457999999999 9999887 789999999999886543
Q ss_pred ---cccCC--CCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 276 ---ELQSS--NSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 276 ---~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
.+..| ...|++++|+|++++|++++.||.|++||+.
T Consensus 325 ~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 325 KCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 67777 7899999999999999999999999999985
No 41
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=295.42 Aligned_cols=285 Identities=18% Similarity=0.321 Sum_probs=235.7
Q ss_pred ccccceeeeecCC--ceEEEe-c---CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCC---CCEEEEEECCCcEEEE
Q 019847 15 EDYYSKVIDWGRN--NVLAVA-L---GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHD---AKTLAVGYMDSKLQLW 85 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~-~---~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw 85 (335)
+...+.+++|+++ .+++++ . |+.|++||+++++....... +|...|.+++|+|+ +++|++|+.||.|++|
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 5668999999984 455555 2 89999999999887655444 68899999999998 6999999999999999
Q ss_pred eCCCce-eEeeecccccceeEee------ecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCC----CEEEEE---
Q 019847 86 DAETSK-LVRNLEGHHRRVATSS------WNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSG----EVCGLK--- 151 (335)
Q Consensus 86 ~~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----~i~~~~--- 151 (335)
|+.+++ .+..+..|...|.++. |+| ++++|++++.||.|++||+++.......+..|.+ .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 174 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGN 174 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEEC
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEe
Confidence 999988 8888999999999995 466 8999999999999999999987655666655554 899998
Q ss_pred -eecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecC---CCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 152 -WSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSP---HQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 152 -~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
|+|++++|++++.||.|++||++.... .....|...|.+++|+| ++..+++ ++ .||.|++||+++++..
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~--~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMAL----RWETNIKNGVCSLEFDRKDISMNKLVA-TS--LEGKFHVFDMRTQHPT 247 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEE----EEEEECSSCEEEEEESCSSSSCCEEEE-EE--STTEEEEEEEEEEETT
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCce----eeecCCCCceEEEEcCCCCCCCCEEEE-EC--CCCeEEEEeCcCCCcc
Confidence 788999999999999999999887432 23355888999999999 7765554 44 7999999999887665
Q ss_pred EEe------ecCCcEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCC-------------------ceeecccCCC
Q 019847 228 HGI------DAKAQICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNM-------------------TKVGELQSSN 281 (335)
Q Consensus 228 ~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~-------------------~~~~~~~~~~ 281 (335)
..+ .+...+.+++|+|++. +++++ +.|+.|++||++++ +.+..+..|.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~------~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 321 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTA------GGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST 321 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEE------ETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEE------eCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC
Confidence 444 3567899999999998 67766 77999999998754 3566778899
Q ss_pred CceeEeEEcCCCCEEE-EEeCCCcEEEEecCCCC
Q 019847 282 SRILDLSQSPDGLTVA-TAGADETIRFWEAFGPS 314 (335)
Q Consensus 282 ~~i~~~~~~~~~~~l~-~~~~dg~v~iw~~~~~~ 314 (335)
..|++++|+|++++|+ +++.||.|++|++...+
T Consensus 322 ~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 322 QPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999999999999998 89999999999998754
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-43 Score=298.26 Aligned_cols=285 Identities=14% Similarity=0.240 Sum_probs=236.4
Q ss_pred eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEE
Q 019847 37 VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHIL 116 (335)
Q Consensus 37 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 116 (335)
.+..|+..... ....+.+|...|++++|+|++++|++|+.||+|++||+.+++....+..|...|.+++|+| ++++|
T Consensus 47 ~~~~~~~~~~~--~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~-~g~~l 123 (380)
T 3iz6_a 47 TAVSFNPTDLV--CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAP-NGQSV 123 (380)
T ss_dssp GCCCCCCCCCE--EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECT-TSSEE
T ss_pred cccccccceeE--EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECC-CCCEE
Confidence 44456655443 3556789999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEeeCCCcEEEEecccCC------eeeEEeecCCCCEEEEEeecC-CCEEEEEeCCCeEEEEEccCCCccccee--eccC
Q 019847 117 TSGSKDKSIINHDVRVSN------NVTSCIKAHSGEVCGLKWSNE-GNLLASGGDDNVVRIWERSKMSSSKSLH--RFTD 187 (335)
Q Consensus 117 ~~~~~dg~i~~~d~~~~~------~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~ 187 (335)
++|+.|+.+++||+.... .....+.+|.+.+.++.|+|+ +..|++|+.|++|++||++++.....+. ...+
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~ 203 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSG 203 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSS
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCC
Confidence 999999999999986432 234557789999999999996 5679999999999999988754322111 1157
Q ss_pred CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC-CCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEE
Q 019847 188 HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ-KGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCL 265 (335)
Q Consensus 188 ~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 265 (335)
|...|.+++|+|.+..++++++ .|+.|++||++ .++.+..+.. ...|.+++|+|++.+++++ +.|+.|++
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~------s~D~~i~l 275 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTG------SDDGTCRL 275 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEE------CSSSCEEE
T ss_pred CccCeEEEEeecCCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEE------cCCCeEEE
Confidence 8899999999885556777777 89999999998 4566666664 5689999999999999888 78999999
Q ss_pred EECCCCceeecccCCC-------CceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCc----cccccccccceec
Q 019847 266 WKYPNMTKVGELQSSN-------SRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDS----VSHLAGLVSLKTS 332 (335)
Q Consensus 266 ~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~----~~~~~~i~~~~~~ 332 (335)
||+++++.+..+..+. ..|++++|+|+|++|++|+.||.|++||+..++..... .+|...|.++.++
T Consensus 276 wd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s 353 (380)
T 3iz6_a 276 FDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLS 353 (380)
T ss_dssp EETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEEC
T ss_pred EECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEEC
Confidence 9999998887765443 24899999999999999999999999999876654332 5688888888765
No 43
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-42 Score=293.35 Aligned_cols=282 Identities=20% Similarity=0.307 Sum_probs=238.2
Q ss_pred cccceeeeecCC---ceEEEecCCeEEEEEe----cCCc------eeeEEee--c------CCCCCceEEEEcCCCCEEE
Q 019847 16 DYYSKVIDWGRN---NVLAVALGPVLFLWKW----ENGK------VKKLLQV--P------GEDDYPTSVSWSHDAKTLA 74 (335)
Q Consensus 16 ~~~~~~~~~~~~---~~~~~~~~~~i~vw~~----~~~~------~~~~~~~--~------~~~~~v~~~~~~~~~~~l~ 74 (335)
...+.+++|+++ .+++++.|+.|++|++ .+++ ....+.. . +|...|++++|+|++++|+
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 124 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV 124 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE
Confidence 357889999984 4666778999999999 8777 2222221 1 2677999999999999999
Q ss_pred EEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee------------------
Q 019847 75 VGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV------------------ 136 (335)
Q Consensus 75 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~------------------ 136 (335)
+++.||.|++|| .+++.+..+..|...|.+++|+| ++++|++++.|+.|++||++++...
T Consensus 125 ~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 125 TGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 999999999999 67888889999999999999999 9999999999999999998754321
Q ss_pred -------------------------------------eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc
Q 019847 137 -------------------------------------TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS 179 (335)
Q Consensus 137 -------------------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 179 (335)
...+..|...|.+++|+|++++|++++.||.|++||++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--- 279 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--- 279 (425)
T ss_dssp ---CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB---
T ss_pred cCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC---
Confidence 1234468889999999999999999999999999998764
Q ss_pred cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeec
Q 019847 180 KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASG 258 (335)
Q Consensus 180 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (335)
+.+..+..|...|.+++|+|++ ++++++ .|+.|++||+++++.+..+.. ...+.+++|+|++++++++ +
T Consensus 280 ~~~~~~~~~~~~i~~~~~~~~~--~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~------~ 349 (425)
T 1r5m_A 280 NSQNCFYGHSQSIVSASWVGDD--KVISCS--MDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVA------F 349 (425)
T ss_dssp SCSEEECCCSSCEEEEEEETTT--EEEEEE--TTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEE------E
T ss_pred ccceEecCCCccEEEEEECCCC--EEEEEe--CCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEE------E
Confidence 4466667799999999999998 555555 799999999999999888876 5689999999999999887 6
Q ss_pred CCCeEEEEECCCCc--------------------eeecccCCCC--ceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 259 DGNKLCLWKYPNMT--------------------KVGELQSSNS--RILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 259 ~~~~i~i~d~~~~~--------------------~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
.|+.|++||+.+++ .+..+..|.. .|++++|+|++++|++++.||.|++|++.+
T Consensus 350 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 350 MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 79999999999888 8888999976 999999999999999999999999999863
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.4e-42 Score=281.19 Aligned_cols=251 Identities=21% Similarity=0.340 Sum_probs=210.4
Q ss_pred eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC--ceeEeeecccccceeEeeecCC-CCCEEEEeeCCCcEEEEe
Q 019847 53 QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET--SKLVRNLEGHHRRVATSSWNHW-NGHILTSGSKDKSIINHD 129 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~~d 129 (335)
.+.+|...|++++|+|+|++||+|+.|++|++||+.+ .+.+..+.+|..+|.+++|++. ++++|++|+.|++|++||
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWK 83 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEE
Confidence 4568999999999999999999999999999999974 4678889999999999999863 489999999999999999
Q ss_pred cccCC-eeeEEeecCCCCEEEEEeecC--CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCC-----
Q 019847 130 VRVSN-NVTSCIKAHSGEVCGLKWSNE--GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQ----- 201 (335)
Q Consensus 130 ~~~~~-~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----- 201 (335)
++++. .....+..|...|.+++|+|+ +.+|++++.|+.|++||++..... ....+.+|...|.+++|+|++
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-SPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-CCEEEECCSSCEEEEEECCCC-----
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-eeeeeecccCccceEeecCCcccccc
Confidence 98654 234556789999999999997 889999999999999999865322 234567899999999999973
Q ss_pred -------CcEEEEecCCCCCeEEEEECCCCc----eEEEeec-CCcEeEEEeCCCC---ceeeeeeeeeeecCCCeEEEE
Q 019847 202 -------VNVLATGGGREDGCIKIWNVQKGT----CIHGIDA-KAQICGLEWNRHH---KEILSGHGFSASGDGNKLCLW 266 (335)
Q Consensus 202 -------~~~~~~~~g~~d~~i~i~d~~~~~----~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~ 266 (335)
..++++++ .|+.|++||+++++ ....+.. ...|.+++|+|++ .+++++ +.|+.|++|
T Consensus 163 ~~~~~~~~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~------s~D~~v~iW 234 (297)
T 2pm7_B 163 EHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV------SQDRTCIIW 234 (297)
T ss_dssp -------CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE------ETTSCEEEE
T ss_pred cCCCCCCcceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE------ECCCcEEEE
Confidence 24677776 89999999998776 4555654 4679999999995 667766 789999999
Q ss_pred ECCCCc---eeecc--cCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 267 KYPNMT---KVGEL--QSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 267 d~~~~~---~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
|+++.. ....+ ..|...|.+++|+|++++|++++.||.|++|+...
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 987743 11222 56788999999999999999999999999999864
No 45
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2e-41 Score=292.92 Aligned_cols=294 Identities=16% Similarity=0.271 Sum_probs=251.6
Q ss_pred cceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 18 YSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.+.++.++++.+++++.|+.|++||+.+++.. ..+.+|...|.+++|+|++ +|++|+.||.|++||+++++.+..+.
T Consensus 124 v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~--~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~ 200 (464)
T 3v7d_B 124 VITCLQFEDNYVITGADDKMIRVYDSINKKFL--LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFE 200 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cEEEEEECCCEEEEEcCCCcEEEEECCCCcEE--EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEEC
Confidence 35688998899999999999999999998864 4566999999999999988 99999999999999999999999999
Q ss_pred ccccceeEeeecC-CCCCEEEEeeCCCcEEEEecccCCee----------------------eEEeecCCCCEEEEEeec
Q 019847 98 GHHRRVATSSWNH-WNGHILTSGSKDKSIINHDVRVSNNV----------------------TSCIKAHSGEVCGLKWSN 154 (335)
Q Consensus 98 ~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~----------------------~~~~~~~~~~i~~~~~~~ 154 (335)
+|...|.+++|++ .++.++++++.||.|++||+++.... ...+.+|...+.++ ++
T Consensus 201 ~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 278 (464)
T 3v7d_B 201 GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 278 (464)
T ss_dssp CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EE
T ss_pred CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cC
Confidence 9999999999985 26789999999999999999865432 44567888888887 57
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-C
Q 019847 155 EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-K 233 (335)
Q Consensus 155 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~ 233 (335)
+++++++++.||.|++||+++ .+.+..+.+|...|.+++|+|++..++ +++ .|+.|++||+++++++..+.. .
T Consensus 279 ~~~~l~~~~~d~~i~vwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~-sg~--~dg~i~vwd~~~~~~~~~~~~h~ 352 (464)
T 3v7d_B 279 HGNIVVSGSYDNTLIVWDVAQ---MKCLYILSGHTDRIYSTIYDHERKRCI-SAS--MDTTIRIWDLENGELMYTLQGHT 352 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEEEETTTTEEE-EEE--TTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCEEEEEeCCCeEEEEECCC---CcEEEEecCCCCCEEEEEEcCCCCEEE-EEe--CCCcEEEEECCCCcEEEEEeCCC
Confidence 788999999999999999876 455777888999999999999987555 444 799999999999999998875 4
Q ss_pred CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 234 AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
..+.++.++ +.+++++ +.|+.|++||+.++....... +...+..++|+|++++|++++ ||.|++||+.++
T Consensus 353 ~~v~~~~~~--~~~l~s~------s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 353 ALVGLLRLS--DKFLVSA------AADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp SCEEEEEEC--SSEEEEE------ETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred CcEEEEEEc--CCEEEEE------eCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 679999997 4667766 779999999999988766553 556678889999999999998 899999999998
Q ss_pred CCCCC-ccccccccccceec
Q 019847 314 SGDED-SVSHLAGLVSLKTS 332 (335)
Q Consensus 314 ~~~~~-~~~~~~~i~~~~~~ 332 (335)
+.... ...|...|.++.++
T Consensus 423 ~~~~~~~~~~~~~v~~v~~~ 442 (464)
T 3v7d_B 423 KLVHANILKDADQIWSVNFK 442 (464)
T ss_dssp CEEESCTTTTCSEEEEEEEE
T ss_pred cEEehhhccCCCcEEEEEec
Confidence 77654 56777888877764
No 46
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-43 Score=297.16 Aligned_cols=283 Identities=15% Similarity=0.199 Sum_probs=219.6
Q ss_pred cccceeeeecCC-c-eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce--
Q 019847 16 DYYSKVIDWGRN-N-VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK-- 91 (335)
Q Consensus 16 ~~~~~~~~~~~~-~-~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-- 91 (335)
...+.+++|+++ . +++++.|+.|++||+.++.......+.+|...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 346888999984 3 555558999999999988545566778999999999999999999999999999999999877
Q ss_pred -eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe--eeEEeec-CCCCEEEEEeecCCCEEEEEeCCCe
Q 019847 92 -LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN--VTSCIKA-HSGEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 92 -~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
....+..|...|.+++|+| ++++|++++.|+.|++||++.... ....+.. |...|.+++|+|++++|++++.|+.
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp CCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred eeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 6677788999999999999 999999999999999999987653 3455666 9999999999999999999999999
Q ss_pred EEEEEccCCC---------------cccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce----EE
Q 019847 168 VRIWERSKMS---------------SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC----IH 228 (335)
Q Consensus 168 i~iwd~~~~~---------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~----~~ 228 (335)
|++||++... ....+..+ .|...|.+++|+|++..+++. + .|+.|++||+++++. +.
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~-~--~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYA-G--HDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEE-E--TTTEEC-CEECSTTSCEEECC
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEE-e--CCCcEEEEECCCCCCcceeeE
Confidence 9999986322 12344555 899999999999999755554 4 799999999999887 56
Q ss_pred Eeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc--ee-------------------------------
Q 019847 229 GIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT--KV------------------------------- 274 (335)
Q Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~--~~------------------------------- 274 (335)
.+.. ..++.+++|+|++++++++ ++++.+ +|+..... ..
T Consensus 246 ~~~~~~~~v~~~~~s~~~~~l~~~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (377)
T 3dwl_C 246 TVKLSQLPLRSLLWANESAIVAAG------YNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFT 318 (377)
T ss_dssp CEECSSSCEEEEEEEETTEEEEEE------SSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------
T ss_pred eecCCCCceEEEEEcCCCCEEEEE------cCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccc
Confidence 6654 4579999999999998876 445544 77654211 00
Q ss_pred ---e----------------cccCCCCceeEeEEcCCC-C---EEEEEeCCCcEEEEec
Q 019847 275 ---G----------------ELQSSNSRILDLSQSPDG-L---TVATAGADETIRFWEA 310 (335)
Q Consensus 275 ---~----------------~~~~~~~~i~~~~~~~~~-~---~l~~~~~dg~v~iw~~ 310 (335)
. ....|...|+++++.+.. . .|+|++.||.|++||+
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 319 ALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 011388999999976643 3 6999999999999985
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-41 Score=288.22 Aligned_cols=284 Identities=19% Similarity=0.346 Sum_probs=230.2
Q ss_pred cCCeEEEEEecCCcee--eEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeeccccc----------
Q 019847 34 LGPVLFLWKWENGKVK--KLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHR---------- 101 (335)
Q Consensus 34 ~~~~i~vw~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---------- 101 (335)
.+....+|+....+.. ......+|...|.+++|+|+|++||+|+ ++.+++|++.+++.+..+..+..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~ 116 (393)
T 1erj_A 38 TNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNT 116 (393)
T ss_dssp CSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------------
T ss_pred CCceEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccc
Confidence 3344456765443321 1222236999999999999999999986 68999999999998887765432
Q ss_pred --------ceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEc
Q 019847 102 --------RVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWER 173 (335)
Q Consensus 102 --------~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 173 (335)
.|.+++|+| ++++|++|+.|+.|++||+++.+ ....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 117 ~~~~~~~~~v~~v~~s~-dg~~l~s~~~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~ 194 (393)
T 1erj_A 117 SSSPSSDLYIRSVCFSP-DGKFLATGAEDRLIRIWDIENRK-IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 194 (393)
T ss_dssp ----CCCCBEEEEEECT-TSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cccCCCceeEEEEEECC-CCCEEEEEcCCCeEEEEECCCCc-EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEEC
Confidence 489999999 99999999999999999998654 46678899999999999999999999999999999998
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee--------cCCcEeEEEeCCCC
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID--------AKAQICGLEWNRHH 245 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~--------~~~~~~~~~~~~~~ 245 (335)
++.. ....+. +...+.+++|+|....++++++ .|+.|++||+++++.+..+. +...+.+++|+|++
T Consensus 195 ~~~~---~~~~~~-~~~~v~~~~~~~~~~~~l~~~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 195 RTGQ---CSLTLS-IEDGVTTVAVSPGDGKYIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp TTTE---EEEEEE-CSSCEEEEEECSTTCCEEEEEE--TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred CCCe---eEEEEE-cCCCcEEEEEECCCCCEEEEEc--CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 8643 233333 5677999999994445666766 89999999999998877762 34579999999999
Q ss_pred ceeeeeeeeeeecCCCeEEEEECCCC------------ceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 246 KEILSGHGFSASGDGNKLCLWKYPNM------------TKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~i~d~~~~------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
++++++ +.|+.|++||+.+. .....+.+|...|.+++|+|++++|++|+.||.|++||+..+
T Consensus 269 ~~l~s~------s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 269 QSVVSG------SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp SEEEEE------ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred CEEEEE------eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 999887 77999999999763 334567789999999999999999999999999999999998
Q ss_pred CCCCCccccccccccceec
Q 019847 314 SGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 314 ~~~~~~~~~~~~i~~~~~~ 332 (335)
+......+|...|.++.++
T Consensus 343 ~~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 343 NPLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp CEEEEEECCSSCEEEEEEC
T ss_pred eEEEEECCCCCCEEEEEec
Confidence 8777777888888877653
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-41 Score=275.24 Aligned_cols=279 Identities=17% Similarity=0.261 Sum_probs=238.1
Q ss_pred cccccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc--
Q 019847 14 MEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS-- 90 (335)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-- 90 (335)
.+...+.+++|.++ .+++++.||.|++||+++++.... +..|...|.+++|+|++++|++++.||.|++|++...
T Consensus 16 ~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 16 GHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTV--VYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEE--EEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEE--eecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 35667888888444 577778999999999988876444 4468999999999999999999999999999998754
Q ss_pred -eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeE
Q 019847 91 -KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVV 168 (335)
Q Consensus 91 -~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i 168 (335)
+.+..+..|...|.++.| +++.+++++.||.|++|| .......+..|...+.+++|.| +++++++++.||.|
T Consensus 94 ~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF---QDGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred CCcccchhhcccCEEEEEe---cCCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 567778889999999999 567999999999999999 3445666788999999999998 99999999999999
Q ss_pred EEEEccCCCcccceeeccC-CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCc
Q 019847 169 RIWERSKMSSSKSLHRFTD-HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHK 246 (335)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~ 246 (335)
++||.. .....+.. |...+.+++|+|++. +++++ .|+.|++||+++++.+..+. +...+.+++|+|++
T Consensus 168 ~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 168 KLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH--FISCS--NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp EEEETT-----EEEEEECSSCSSCEEEEEEEETTE--EEEEE--TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-
T ss_pred EEEecC-----ceEEEEeccCcccEEEEEEcCCCe--EEEcc--CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-
Confidence 999933 33445555 889999999999986 44544 79999999999999998887 45689999999999
Q ss_pred eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q 019847 247 EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~ 317 (335)
.++++ +.|+.|++||+.+++.+..+..|...|++++|+|+++ +++++.||.|++|++..++...
T Consensus 238 ~l~~~------~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 238 DIVSC------GEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp CEEEE------ETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred CEEEE------ecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 46655 6799999999999999999999999999999999998 6679999999999999876544
No 49
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-42 Score=294.55 Aligned_cols=288 Identities=14% Similarity=0.230 Sum_probs=237.4
Q ss_pred cccccceeeeecCC--ceEEEecCCeEEEEEecCC--ceeeEEeecCCCCCceEEEEcCC-CCEEEEEECCCcEEEEeCC
Q 019847 14 MEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENG--KVKKLLQVPGEDDYPTSVSWSHD-AKTLAVGYMDSKLQLWDAE 88 (335)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~ 88 (335)
.+...+.+++|+++ .+++++.|+.|++|++.+. .......+.+|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 35667899999884 4666778999999999872 11245567789999999999998 8999999999999999999
Q ss_pred Cce------eEe---eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecC------CCCEEEEEee
Q 019847 89 TSK------LVR---NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAH------SGEVCGLKWS 153 (335)
Q Consensus 89 ~~~------~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~~ 153 (335)
+++ ... .+..|...|.+++|+|..+.+|++++.||.|++||+++.+. ...+..+ ...|.+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE-VIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE-EEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc-ceEEeccccccccCCceEEEEEC
Confidence 876 332 34678899999999994489999999999999999987654 4445544 7899999999
Q ss_pred cCC-CEEEEEeCCC---eEEEEEccCCCcccceeecc-CCCCCeeEEEecC-CCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 154 NEG-NLLASGGDDN---VVRIWERSKMSSSKSLHRFT-DHCGGVKALAWSP-HQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 154 ~~~-~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
|++ .++++++.|+ .|++||++... ..+..+. +|...|.+++|+| ++. ++++++ .|+.|++||+++++.+
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~-~l~s~~--~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNAN--TPLQTLNQGHQKGILSLDWCHQDEH-LLLSSG--RDNTVLLWNPESAEQL 298 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTT--SCSBCCCSCCSSCEEEEEECSSCSS-CEEEEE--SSSEEEEECSSSCCEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCC--CCcEEeecCccCceeEEEeCCCCCC-eEEEEe--CCCCEEEeeCCCCccc
Confidence 986 6899999998 99999998742 3455666 7999999999999 664 555555 7999999999999999
Q ss_pred EEeec-CCcEeEEEeCCCC-ceeeeeeeeeeecCCCeEEEEECCCCceeecccC--------------------------
Q 019847 228 HGIDA-KAQICGLEWNRHH-KEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS-------------------------- 279 (335)
Q Consensus 228 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------------------------- 279 (335)
..+.. ...+.+++|+|++ ..++++ +.|+.|++||+.+.........
T Consensus 299 ~~~~~~~~~v~~~~~s~~~~~~l~s~------~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (416)
T 2pm9_A 299 SQFPARGNWCFKTKFAPEAPDLFACA------SFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPS 372 (416)
T ss_dssp EEEECSSSCCCCEEECTTCTTEEEEC------CSSSEEEEEESCCCCCSSCC----------------------CCSCCC
T ss_pred eeecCCCCceEEEEECCCCCCEEEEE------ecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccc
Confidence 88875 5679999999999 677776 7799999999987664433211
Q ss_pred ---------CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 280 ---------SNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 280 ---------~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
|..++++++|+|+|++|++++.||.|++|++...
T Consensus 373 ~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 373 VFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp SSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 5667889999999999999999999999998864
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-42 Score=301.78 Aligned_cols=268 Identities=8% Similarity=0.097 Sum_probs=210.8
Q ss_pred ecCCeEEEEEecCCceee--EEeecCCCCCceEEEEcCC------CCEEEEEECCCcEEEEeCCCcee-----------E
Q 019847 33 ALGPVLFLWKWENGKVKK--LLQVPGEDDYPTSVSWSHD------AKTLAVGYMDSKLQLWDAETSKL-----------V 93 (335)
Q Consensus 33 ~~~~~i~vw~~~~~~~~~--~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iw~~~~~~~-----------~ 93 (335)
+.|+.|+||++++++... ...+.+|...|.+++|+|+ +.+||+++.||+|++||+.+++. .
T Consensus 180 s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~ 259 (524)
T 2j04_B 180 KHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPS 259 (524)
T ss_dssp --CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCS
T ss_pred CCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCce
Confidence 467899999998876432 2335567889999999996 57999999999999999987642 2
Q ss_pred eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEE--EeecCC-CEEEEEeCCCeEEE
Q 019847 94 RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGL--KWSNEG-NLLASGGDDNVVRI 170 (335)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~dg~i~i 170 (335)
..+.+|...|++++|++ + ..|++|+.||+|++||++++......+.+|...|.++ +|+|++ ++||+++.|++|++
T Consensus 260 ~~l~~h~~~v~sv~~s~-~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvkl 337 (524)
T 2j04_B 260 LTLSLADSLITTFDFLS-P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYI 337 (524)
T ss_dssp EEECCTTTCEEEEEESS-S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEE
T ss_pred EEEEcCCCCEEEEEecC-C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEE
Confidence 35678999999999997 4 4899999999999999987655566678999999999 578887 89999999999999
Q ss_pred EEccCCCcccceeeccCCC--CCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCce
Q 019847 171 WERSKMSSSKSLHRFTDHC--GGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKE 247 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 247 (335)
||+++.. ....+.+|. ..|.+++|+|++..+ ++++ .|++|++||++++.++..+. +...|.+++|+|+++.
T Consensus 338 WD~~~~~---~~~~~~~~~~~~~v~~v~fsp~~~~l-~s~~--~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~ 411 (524)
T 2j04_B 338 FNPKDIA---TTKTTVSRFRGSNLVPVVYCPQIYSY-IYSD--GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM 411 (524)
T ss_dssp ECGGGHH---HHCEEEEECSCCSCCCEEEETTTTEE-EEEC--SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCB
T ss_pred EECCCCC---cccccccccccCcccceEeCCCcCeE-EEeC--CCCcEEEEECcccccceeeecCCCceEEEEeCCCCCe
Confidence 9988643 333344443 358899999998754 4544 79999999999998866665 4568999999999999
Q ss_pred eeeeeeeeeecCCCeEEEEECCC--------------------------------------------CceeecccCCCCc
Q 019847 248 ILSGHGFSASGDGNKLCLWKYPN--------------------------------------------MTKVGELQSSNSR 283 (335)
Q Consensus 248 ~~~~~~~~~~~~~~~i~i~d~~~--------------------------------------------~~~~~~~~~~~~~ 283 (335)
+++| +.|+.|++||+.. +..+..+.+|...
T Consensus 412 l~Sg------s~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~ 485 (524)
T 2j04_B 412 VLAG------SADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGIN 485 (524)
T ss_dssp CEEE------ETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCS
T ss_pred EEEE------ECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCce
Confidence 9887 6788888887421 1112234567888
Q ss_pred eeEeEEcCCCC---EEEEEeCCCcEEEEecCCCC
Q 019847 284 ILDLSQSPDGL---TVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 284 i~~~~~~~~~~---~l~~~~~dg~v~iw~~~~~~ 314 (335)
|.+++|+|+++ ++|+|+.||.|+||++....
T Consensus 486 V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 486 ITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred EEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 99999999964 99999999999999988653
No 51
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-41 Score=279.85 Aligned_cols=269 Identities=22% Similarity=0.308 Sum_probs=215.8
Q ss_pred eEEeecCCCCCceEEEE-----cC-CCCEEEEEECCCcEEEEeCCCc-------eeEeeecccccceeEeeecCCCCCEE
Q 019847 50 KLLQVPGEDDYPTSVSW-----SH-DAKTLAVGYMDSKLQLWDAETS-------KLVRNLEGHHRRVATSSWNHWNGHIL 116 (335)
Q Consensus 50 ~~~~~~~~~~~v~~~~~-----~~-~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l 116 (335)
....+.+|...|++++| ++ ++++|++|+.|++|++||+.+. .....+.+|...|.+++|+| ++.++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEE
Confidence 34467799999999999 77 8999999999999999998743 45677889999999999999 99999
Q ss_pred EEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEE
Q 019847 117 TSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALA 196 (335)
Q Consensus 117 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 196 (335)
++|+.|++|++||++++.. ...+.+|...|.+++|+|++++|++++.|+.|++||+... ..........|...|.+++
T Consensus 92 ~s~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTT-YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEETTSEEEEEETTSSCE-EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEE
T ss_pred EEEcCCCcEEEEECCCCcE-EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeee
Confidence 9999999999999997664 5667899999999999999999999999999999998732 1112222346888999999
Q ss_pred ecCCCC---------cEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEE
Q 019847 197 WSPHQV---------NVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLW 266 (335)
Q Consensus 197 ~~~~~~---------~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~ 266 (335)
|+|++. .++++++ .|+.|++||. +.+....+. +...+.+++|+|++++++++ +.|+.|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sg------s~dg~v~iw 240 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVG--WDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATG------GKDKKLLIW 240 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEE--TTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEE------ETTCEEEEE
T ss_pred eccccccccccCCCCCEEEEEc--CCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEE------cCCCeEEEE
Confidence 999873 3566666 8999999994 456665665 45689999999999999988 779999999
Q ss_pred ECCCCc-eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCC--Cc-----------cccccccccceec
Q 019847 267 KYPNMT-KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDE--DS-----------VSHLAGLVSLKTS 332 (335)
Q Consensus 267 d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~--~~-----------~~~~~~i~~~~~~ 332 (335)
|+.+.. +...+ .+...|.+++|+|++++++++ .|+.|++|++...+... .. .+|...+.++.++
T Consensus 241 d~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 241 DILNLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp ESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred ECCCCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 995443 33333 345579999999999877654 68889999998765433 11 1456667666654
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.2e-41 Score=280.33 Aligned_cols=299 Identities=14% Similarity=0.206 Sum_probs=246.7
Q ss_pred cccceeeeecCC-ceEEE-ecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE
Q 019847 16 DYYSKVIDWGRN-NVLAV-ALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV 93 (335)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~-~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 93 (335)
...+.+++|+++ +++++ ..++.+..|..... .......+|...|++++|+|++++|++++ ||.|++||+.+++..
T Consensus 9 ~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 9 SKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH--ARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEECCEEEECSSSCEEECCCCTTSSSSTTCCSE--EEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred CCceeEEEECCCCCEEEeecCCCcEeccccCCc--cccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 345778899885 44443 44566666654332 23334457999999999999999999998 999999999876543
Q ss_pred eee---c--ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe-eeEEeecCCCCEEEEEeecCCCEEEEEeCCCe
Q 019847 94 RNL---E--GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN-VTSCIKAHSGEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 94 ~~~---~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
..+ . .|...|.+++|+| ++++|++++.||.|++||+++... ....+..|...+.+++|+|+++++++++.||.
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 164 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCc
Confidence 332 2 6889999999999 999999999999999999987653 34567789999999999999999999999999
Q ss_pred EEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCce
Q 019847 168 VRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKE 247 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (335)
|++||+++. +.+..+..|...+.+++|+|++..+++ ++ .|+.|++||+++++.+..+.....+.+++|+|+++.
T Consensus 165 v~~~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~-~~--~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 165 IAVWDLHNQ---TLVRQFQGHTDGASCIDISNDGTKLWT-GG--LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEW 238 (337)
T ss_dssp EEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEE-EE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSE
T ss_pred EEEEeCCCC---ceeeeeecccCceEEEEECCCCCEEEE-Ee--cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCE
Confidence 999998763 456777789999999999999965555 44 799999999999999999998899999999999999
Q ss_pred eeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccc
Q 019847 248 ILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLV 327 (335)
Q Consensus 248 ~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~ 327 (335)
++++ +.++.|++||+.+++.. .+..|...|.+++|+|++++|++++.||.|++|++..++.. ....|...+.
T Consensus 239 l~~~------~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~~~~~~~~v~ 310 (337)
T 1gxr_A 239 LAVG------MESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI-FQSKESSSVL 310 (337)
T ss_dssp EEEE------ETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-EEEECSSCEE
T ss_pred EEEE------cCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE-EEecCCCcEE
Confidence 9887 67999999999988764 56789999999999999999999999999999999987655 2345666676
Q ss_pred cceec
Q 019847 328 SLKTS 332 (335)
Q Consensus 328 ~~~~~ 332 (335)
++.++
T Consensus 311 ~~~~s 315 (337)
T 1gxr_A 311 SCDIS 315 (337)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66553
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-41 Score=289.50 Aligned_cols=297 Identities=16% Similarity=0.213 Sum_probs=235.4
Q ss_pred eeeeecC--CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 20 KVIDWGR--NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 20 ~~~~~~~--~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
+.++|++ ..+++++.|+.|++||+.+++.... +..| ..+....|+|++++|++|+.||.|++||+.+++....+.
T Consensus 60 ~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM--LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp TTCEEEEEETTEEEEEETTEEEEEECCSEETTTT--SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cceeeeecCCeEEEEEcCCcEEEEEecccceeeE--EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 3566766 5688888999999999987764332 2334 444555789999999999999999999999999998888
Q ss_pred ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCC
Q 019847 98 GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMS 177 (335)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 177 (335)
.|...|.+++|+| ++++|++++.|+.|++||+++++. ...+.+|...|.+++|+|++++|++++.||.|++||+++..
T Consensus 137 ~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 137 AHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSN-PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCC-CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcC-ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 9999999999999 899999999999999999987665 55678899999999999999999999999999999988754
Q ss_pred cccceeeccCCC---------------------CCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec--CC
Q 019847 178 SSKSLHRFTDHC---------------------GGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA--KA 234 (335)
Q Consensus 178 ~~~~~~~~~~~~---------------------~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~--~~ 234 (335)
....+.....+. ..+.+++|+|++.. +++++ .||.|++||+++++.+..+.. ..
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~ 291 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-VIAGH--VSGVITVHNVFSKEQTIQLPSKFTC 291 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEE--TTSCEEEEETTTCCEEEEECCTTSS
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE-EEEEc--CCCeEEEEECCCCceeEEcccccCC
Confidence 332222222233 44455556788864 45554 799999999999988877753 46
Q ss_pred cEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCCce-eecccC-CCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 235 QICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNMTK-VGELQS-SNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
.+.+++|+|++. +++++ +.||.|++||+++++. +..+.. |...|.++.+ +++++|++++.||.|++|++.
T Consensus 292 ~v~~~~~~~~~~~~l~~g------~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAG------YENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp CEEEEEECSSCTTEEEEE------ETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEEC
T ss_pred CceeEEEeCCCCCEEEEE------eCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEecc
Confidence 899999999999 77777 7799999999998754 666766 5667777754 578899999999999999998
Q ss_pred CCCCCC---------Ccccccccccccee
Q 019847 312 GPSGDE---------DSVSHLAGLVSLKT 331 (335)
Q Consensus 312 ~~~~~~---------~~~~~~~~i~~~~~ 331 (335)
.+.... ....|...+.++.+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 393 (420)
T 3vl1_A 365 DPESERPAIEFETPTFLVSNDDAVSQFCY 393 (420)
T ss_dssp CTTCCSCEECTTSCEEECCSSCCCCEEEE
T ss_pred CCCCCccceeccCccEEccCCcceEEEEE
Confidence 853322 23345555555554
No 54
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-41 Score=281.59 Aligned_cols=269 Identities=22% Similarity=0.414 Sum_probs=211.7
Q ss_pred EEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc--eeEeee-cc-cccceeEeeecCCCCCEEEEeeCCCcEE
Q 019847 51 LLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS--KLVRNL-EG-HHRRVATSSWNHWNGHILTSGSKDKSII 126 (335)
Q Consensus 51 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 126 (335)
...+.+|...|.+++|+|+ +|++|+.|+.|++||+.++ +....+ .. |...|.+++|+| ++++|++|+.|+.|+
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~ 83 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEE
Confidence 4456799999999999988 9999999999999999875 445555 34 899999999999 999999999999999
Q ss_pred EEecccC------CeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCC-CcccceeeccCCCCCeeEEEecC
Q 019847 127 NHDVRVS------NNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKM-SSSKSLHRFTDHCGGVKALAWSP 199 (335)
Q Consensus 127 ~~d~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~~~ 199 (335)
+||++.. ......+.+|...|.+++|+|++++|++++.|+.|++||++.. ...+.+..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 9998532 2345667899999999999999999999999999999998533 33455677889999999999999
Q ss_pred CCCcEEEEecCCCCCeEEEEECCCC--ceEEEeec-CCcEeEEEeCCC--CceeeeeeeeeeecCCCeEEEEECCCC---
Q 019847 200 HQVNVLATGGGREDGCIKIWNVQKG--TCIHGIDA-KAQICGLEWNRH--HKEILSGHGFSASGDGNKLCLWKYPNM--- 271 (335)
Q Consensus 200 ~~~~~~~~~~g~~d~~i~i~d~~~~--~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~i~d~~~~--- 271 (335)
++. ++++++ .|+.|++||..++ +++..+.. ...+.+++|+|+ +..++++ +.|+.|++||+..+
T Consensus 164 ~~~-~l~s~s--~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~------s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 164 SEA-LLASSS--YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG------SDDSTVRVWKYMGDDED 234 (330)
T ss_dssp SSS-EEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE------ETTSCEEEEEEEEECTT
T ss_pred CCC-EEEEEc--CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE------eCCCeEEEEEecCCCcc
Confidence 986 555555 8999999998876 56666764 468999999999 5567766 78999999998754
Q ss_pred -----ceeecccC-CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCC--C-CCcccccc-ccccceec
Q 019847 272 -----TKVGELQS-SNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSG--D-EDSVSHLA-GLVSLKTS 332 (335)
Q Consensus 272 -----~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~--~-~~~~~~~~-~i~~~~~~ 332 (335)
.....+.. |...|.+++|++++ +|++++.||.|++|+...++. . .....|.. .|.++.++
T Consensus 235 ~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~ 304 (330)
T 2hes_X 235 DQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWL 304 (330)
T ss_dssp SCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC
T ss_pred ccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEe
Confidence 33444554 88999999999765 899999999999999876531 1 11234554 56655543
No 55
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8.7e-41 Score=274.64 Aligned_cols=248 Identities=20% Similarity=0.307 Sum_probs=216.2
Q ss_pred eEEeecCCCCCceEEEEcCCC-CEEEEEECCCcEEEEeCCC-----ceeEeeecccccceeEeeecCCCCCEEEEeeCCC
Q 019847 50 KLLQVPGEDDYPTSVSWSHDA-KTLAVGYMDSKLQLWDAET-----SKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK 123 (335)
Q Consensus 50 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 123 (335)
....+.+|...|++++|+|++ ++|++|+.|++|++|++.. +..+..+.+|...|.+++|+| ++.+|++|+.|+
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~ 87 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDK 87 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTS
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCC
Confidence 345678999999999999965 8999999999999999864 345678899999999999999 999999999999
Q ss_pred cEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCC-
Q 019847 124 SIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQV- 202 (335)
Q Consensus 124 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~- 202 (335)
+|++||+++++. ...+.+|...|.+++|+|++++|++++.|+.|++||++. ..+..+.+|...|.++.|.|...
T Consensus 88 ~v~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~----~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 88 TLRLWDVATGET-YQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG----QCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp EEEEEETTTTEE-EEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS----CEEEEECCCSSCEEEEEECCC---
T ss_pred EEEEEECCCCCe-eEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC----CeEEEEeccCCcEEEEEEccCCCC
Confidence 999999986654 666889999999999999999999999999999999863 45677788999999999999643
Q ss_pred ----cEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecc
Q 019847 203 ----NVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGEL 277 (335)
Q Consensus 203 ----~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~ 277 (335)
.++++++ .|+.|++||+++++....+.. ...+.+++|+|++++++++ +.|+.|++||+.+++.+..+
T Consensus 163 ~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~------~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 163 DDDSVTIISAG--NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA------GKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp ---CCEEEEEE--TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE------ETTCEEEEEETTTTEEEEEE
T ss_pred CCCccEEEEEe--CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE------eCCCeEEEEECCCCcEEEEe
Confidence 3566666 899999999999988877764 5689999999999999988 78999999999999998888
Q ss_pred cCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 278 QSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 278 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
..+ ..|.+++|+|++.+|++++.+ .+++|++...
T Consensus 235 ~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 235 SAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp ECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTE
T ss_pred cCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcC
Confidence 765 579999999999999988765 5999998764
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-42 Score=284.78 Aligned_cols=251 Identities=21% Similarity=0.361 Sum_probs=206.3
Q ss_pred ecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce--eEeeecccccceeEeeecCC-CCCEEEEeeCCCcEEEEec
Q 019847 54 VPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK--LVRNLEGHHRRVATSSWNHW-NGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 54 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~~d~ 130 (335)
+.+|...|++++|+|+|++||+|+.|++|++||+.+++ .+..+.+|...|.+++|+++ ++++|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 46899999999999999999999999999999998764 46778899999999999863 4899999999999999999
Q ss_pred ccCC-eeeEEeecCCCCEEEEEeecC--CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCC------
Q 019847 131 RVSN-NVTSCIKAHSGEVCGLKWSNE--GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQ------ 201 (335)
Q Consensus 131 ~~~~-~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------ 201 (335)
+++. .....+.+|...|.+++|+|+ +.+|++++.|+.|++||++..........+.+|...+.+++|+|+.
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 8654 334567789999999999997 7899999999999999998653333345667899999999999973
Q ss_pred ----------CcEEEEecCCCCCeEEEEECCCC---ceEEEeec-CCcEeEEEeCCCC----ceeeeeeeeeeecCCCeE
Q 019847 202 ----------VNVLATGGGREDGCIKIWNVQKG---TCIHGIDA-KAQICGLEWNRHH----KEILSGHGFSASGDGNKL 263 (335)
Q Consensus 202 ----------~~~~~~~~g~~d~~i~i~d~~~~---~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i 263 (335)
..++++++ .|+.|++||++.. +++..+.. ...|.+++|+|++ ..++++ +.|+.|
T Consensus 169 ~~~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~------s~D~~v 240 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC------SQDGRV 240 (316)
T ss_dssp --CCSCCCCCCCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE------ETTCEE
T ss_pred ccccccCccccceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE------cCCCeE
Confidence 14666666 8999999999765 34555554 4579999999987 667766 789999
Q ss_pred EEEECCCCc----eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 264 CLWKYPNMT----KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 264 ~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
++|++.+.. ....+..|...|.+++|+|++++|++++.||.|++|+...
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 999987631 2234567888999999999999999999999999999864
No 57
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=283.95 Aligned_cols=287 Identities=11% Similarity=0.198 Sum_probs=227.4
Q ss_pred CCcccccceeeeecCC--ceEEEecCCeEEEEEecCCce---------eeEEeecCCC------------CCceEEEEcC
Q 019847 12 YLMEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKV---------KKLLQVPGED------------DYPTSVSWSH 68 (335)
Q Consensus 12 ~~~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~---------~~~~~~~~~~------------~~v~~~~~~~ 68 (335)
.+.+...+.+++|+++ .+++++.||.|++|++.+++. .....+.+|. ..|.+++|+|
T Consensus 24 ~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 24 DVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 4556778999999984 466677899999999987652 2244566898 8899999999
Q ss_pred CC--CEEEEEECCCcEEEEeCCCceeE---------------------------------------ee-ecccccceeEe
Q 019847 69 DA--KTLAVGYMDSKLQLWDAETSKLV---------------------------------------RN-LEGHHRRVATS 106 (335)
Q Consensus 69 ~~--~~l~~~~~dg~i~iw~~~~~~~~---------------------------------------~~-~~~~~~~v~~~ 106 (335)
++ .+|++++.||.|++||+.+++.. .. ..+|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 79999999999999998765432 12 35799999999
Q ss_pred eecCCCCCEEEEeeCCCcEEEEecccCCeeeE-------EeecCCCCEEEEEeecCC-CEEEEEeCCCeEEEEEccCCCc
Q 019847 107 SWNHWNGHILTSGSKDKSIINHDVRVSNNVTS-------CIKAHSGEVCGLKWSNEG-NLLASGGDDNVVRIWERSKMSS 178 (335)
Q Consensus 107 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 178 (335)
+|+| ++++|++| .|+.|++||++....... .+.+|...|.+++|+|++ ++|++++.||.|++||++....
T Consensus 184 ~~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 184 SINS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999 99999998 799999999985444343 255799999999999998 9999999999999999987542
Q ss_pred -ccceeeccCCCC------------CeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-CceEEEeecCCcE--------
Q 019847 179 -SKSLHRFTDHCG------------GVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-GTCIHGIDAKAQI-------- 236 (335)
Q Consensus 179 -~~~~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-~~~~~~~~~~~~~-------- 236 (335)
......+..|.. .|.+++|+|++.. +++++ . +.|++||+++ ++++..+..+..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~--~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRD--Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLY 337 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEE--S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHH
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEee--C-CeEEEEeCCCCccccceeeccccccccccccc
Confidence 122566666765 8999999999864 55554 5 9999999997 8888888766543
Q ss_pred --------eEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecc-------------------------------
Q 019847 237 --------CGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGEL------------------------------- 277 (335)
Q Consensus 237 --------~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~------------------------------- 277 (335)
..++|+|++++++++ +.|+.|++||+.+++.+...
T Consensus 338 ~~~~i~~~~~~~~s~~~~~l~s~------s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDSVVMTG------SYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVD 411 (447)
T ss_dssp HTSGGGCCCCEEECTTSSEEEEE------CSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGG
T ss_pred cccccccceEEEECCCCCEEEEe------ccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccccc
Confidence 339999999999887 78999999999988765310
Q ss_pred -cCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 278 -QSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 278 -~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
..+...|..++|+|++.+||+++.++ +++|.-.
T Consensus 412 ~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 412 SLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp GCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 12345688999999999999998875 7777643
No 58
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-40 Score=284.66 Aligned_cols=276 Identities=18% Similarity=0.430 Sum_probs=233.9
Q ss_pred cccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee
Q 019847 16 DYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN 95 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 95 (335)
...+.+++++++.+++++.|+.|++||+.+++.. ..+.+|...|.+++| ++++|++|+.||.|++||+.+++.+..
T Consensus 133 ~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 133 SKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECK--RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp CCCEEEEECCSSEEEEEESSSCEEEEESSSCCEE--EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred CCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEE--EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 3457889998889999999999999999998864 456689999999998 788999999999999999999999999
Q ss_pred ecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee--eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEc
Q 019847 96 LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV--TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWER 173 (335)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 173 (335)
+..|...|.+++|+ ++.+++|+.||.|++||+++.... ...+.+|...|.+++| +++++++|+.||.|++||+
T Consensus 209 ~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 209 LIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp ECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred EcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 99999999999995 469999999999999999876643 2567789999999999 6789999999999999998
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeee
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGH 252 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 252 (335)
++. +.+..+.+|...|.++.++ + .++++++ .||.|++||+++++++..+.. ...+.+++| ++..++++
T Consensus 284 ~~~---~~~~~~~~~~~~v~~~~~~--~-~~l~~g~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg- 352 (435)
T 1p22_A 284 STC---EFVRTLNGHKRGIACLQYR--D-RLVVSGS--SDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSG- 352 (435)
T ss_dssp TTC---CEEEEEECCSSCEEEEEEE--T-TEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEE-
T ss_pred CcC---cEEEEEcCCCCcEEEEEeC--C-CEEEEEe--CCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEE-
Confidence 764 4577778899999999995 3 3566665 899999999999999998875 457999998 67777777
Q ss_pred eeeeecCCCeEEEEECCCCc---------eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCC
Q 019847 253 GFSASGDGNKLCLWKYPNMT---------KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDED 318 (335)
Q Consensus 253 ~~~~~~~~~~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~ 318 (335)
+.||.|++||+.+++ .+..+.+|.+.|++++| ++.+|++++.||.|++||+........
T Consensus 353 -----~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 353 -----AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp -----ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---------
T ss_pred -----eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 779999999997665 77888999999999999 778999999999999999988765443
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-41 Score=289.06 Aligned_cols=279 Identities=14% Similarity=0.220 Sum_probs=223.1
Q ss_pred ccccceeeeecC-C--ceEEEecCCeEEEEEecC---Ccee-eEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 15 EDYYSKVIDWGR-N--NVLAVALGPVLFLWKWEN---GKVK-KLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 15 ~~~~~~~~~~~~-~--~~~~~~~~~~i~vw~~~~---~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
+...+.+++|++ + .+++++.|+.|++||+.+ +... ....+ +|...|.+++|+|++++|++|+.||.|++||+
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKV 140 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEe
Confidence 456789999998 4 577788999999999977 4422 12333 48999999999999999999999999999999
Q ss_pred C---CceeEeeecc------------cccceeEee--ecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeec--CCCCEE
Q 019847 88 E---TSKLVRNLEG------------HHRRVATSS--WNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKA--HSGEVC 148 (335)
Q Consensus 88 ~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~~~i~ 148 (335)
+ +++....+.. +...+.++. +++ ++.+|++++.|+.|++||+++... ...+.. |...|+
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~h~~~v~ 218 (437)
T 3gre_A 141 NHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLER-LQIIENSPRHGAVS 218 (437)
T ss_dssp EEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCE-EEEEECCGGGCCEE
T ss_pred ccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCee-eEEEccCCCCCceE
Confidence 5 5544443332 334555555 445 789999999999999999987665 445555 889999
Q ss_pred EEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeecc-CCCCCeeEEEecC----CCCcEEEEecCCCCCeEEEEECCC
Q 019847 149 GLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFT-DHCGGVKALAWSP----HQVNVLATGGGREDGCIKIWNVQK 223 (335)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~~~~~~~g~~d~~i~i~d~~~ 223 (335)
+++|+|++++|++|+.||.|++||++. .+.+..+. .|..+|.+++|+| ++ .++++++ .|+.|++||+++
T Consensus 219 ~~~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~s~~~-~~l~s~~--~dg~i~iwd~~~ 292 (437)
T 3gre_A 219 SICIDEECCVLILGTTRGIIDIWDIRF---NVLIRSWSFGDHAPITHVEVCQFYGKNS-VIVVGGS--SKTFLTIWNFVK 292 (437)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTT---TEEEEEEBCTTCEEEEEEEECTTTCTTE-EEEEEES--TTEEEEEEETTT
T ss_pred EEEECCCCCEEEEEcCCCeEEEEEcCC---ccEEEEEecCCCCceEEEEeccccCCCc-cEEEEEc--CCCcEEEEEcCC
Confidence 999999999999999999999999886 34455554 6778999997765 44 4666666 899999999999
Q ss_pred CceEEEeecC---------------------------CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeec
Q 019847 224 GTCIHGIDAK---------------------------AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE 276 (335)
Q Consensus 224 ~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 276 (335)
++.+..+..+ ..+.+++|+ ++++++++ +.|+.|++||+.+++....
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~------~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTD------EATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEE------GGGTEEEEEETTCGGGCEE
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEec------CCCCeEEEEECCCcccceE
Confidence 9988877632 246777777 66777766 7899999999999887766
Q ss_pred ccC-------------------------------------CCCceeEeEEcCC--CCEEEEEeCCCcEEEEe
Q 019847 277 LQS-------------------------------------SNSRILDLSQSPD--GLTVATAGADETIRFWE 309 (335)
Q Consensus 277 ~~~-------------------------------------~~~~i~~~~~~~~--~~~l~~~~~dg~v~iw~ 309 (335)
+.+ |...|++++|+++ +.+|++|+.||.|++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 654 7889999999998 78999999999999995
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6e-40 Score=280.09 Aligned_cols=276 Identities=13% Similarity=0.158 Sum_probs=224.0
Q ss_pred eecC--CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccc
Q 019847 23 DWGR--NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHH 100 (335)
Q Consensus 23 ~~~~--~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 100 (335)
.|++ +.+++++.|+.|++||+++++.. ..+.+|...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~ 181 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQR--EIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR 181 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEE--EETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCccee--eecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC
Confidence 4444 46777889999999999988753 3456899999999999999999999999999999999999999999999
Q ss_pred cceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeec---CCCCEEE---------------------EEeecCC
Q 019847 101 RRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKA---HSGEVCG---------------------LKWSNEG 156 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---~~~~i~~---------------------~~~~~~~ 156 (335)
..|.+++|+| ++++|++++.||.|++||+++++. ...+.. +...+.+ ++|+|++
T Consensus 182 ~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 182 ATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTT-IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEE-EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCce-eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 9999999999 999999999999999999986654 344442 3344444 4557889
Q ss_pred CEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce-EEEeec--C
Q 019847 157 NLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC-IHGIDA--K 233 (335)
Q Consensus 157 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~-~~~~~~--~ 233 (335)
++|++++.||.|++||++.... .......|...|.+++|+|++..++++++ .||.|++||+++++. +..+.. .
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~ 335 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGY--ENGMLAQWDLRSPECPVGEFLINEG 335 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEEESTT
T ss_pred CEEEEEcCCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEe--CCCeEEEEEcCCCcCchhhhhccCC
Confidence 9999999999999999987532 22333457889999999999986777776 899999999998754 556653 4
Q ss_pred CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce---------eecccCCCCceeEeEEcCCCC---EEEEEeC
Q 019847 234 AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK---------VGELQSSNSRILDLSQSPDGL---TVATAGA 301 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~---------~~~~~~~~~~i~~~~~~~~~~---~l~~~~~ 301 (335)
..+.++.+ +++.+++++ +.|+.|++|++..... ...+..|...|.+++|+|++. .|++.+.
T Consensus 336 ~~v~~~~~-~~~~~l~s~------~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 336 TPINNVYF-AAGALFVSS------GFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp SCEEEEEE-ETTEEEEEE------TTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET
T ss_pred CCceEEEe-CCCCEEEEe------cCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC
Confidence 56777754 577777776 7899999999877322 223456788999999999999 7888888
Q ss_pred CCcEEEEecCCC
Q 019847 302 DETIRFWEAFGP 313 (335)
Q Consensus 302 dg~v~iw~~~~~ 313 (335)
+|.+.+|++.++
T Consensus 409 ~g~~~~~~~~~~ 420 (420)
T 3vl1_A 409 NNFCALYNLSNP 420 (420)
T ss_dssp TTEEEEEESCC-
T ss_pred CceEEEEeccCC
Confidence 999999998763
No 61
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.7e-40 Score=296.78 Aligned_cols=309 Identities=17% Similarity=0.252 Sum_probs=261.7
Q ss_pred cccccccCCCCcccccceeeeecCC-ceEEEecCCeEEEEEecCC----ceeeEEeecCCCCC-ceEEEEcC--CCCEEE
Q 019847 3 REARILDAPYLMEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENG----KVKKLLQVPGEDDY-PTSVSWSH--DAKTLA 74 (335)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~----~~~~~~~~~~~~~~-v~~~~~~~--~~~~l~ 74 (335)
+....+......+...+.+++|+++ .+++++.++.|++||++++ +. ...+.+|... |++++|+| ++++|+
T Consensus 5 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~--~~~~~~h~~~~v~~~~~sp~~~~~~l~ 82 (615)
T 1pgu_A 5 SLKEIIPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPP--VVQFTGHGSSVVTTVKFSPIKGSQYLC 82 (615)
T ss_dssp EEEEEECCCCCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCS--EEEECTTTTSCEEEEEECSSTTCCEEE
T ss_pred chhhccCCCCCCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCcccc--ceEEecCCCceEEEEEECcCCCCCEEE
Confidence 3445555555567788999999995 5677777999999999987 54 4566799999 99999999 999999
Q ss_pred EEECCCcEEEEeCCCc--------eeEeeecccccceeEeeecCCCCCEEEEeeCC----CcEEEEecccCCeeeEEeec
Q 019847 75 VGYMDSKLQLWDAETS--------KLVRNLEGHHRRVATSSWNHWNGHILTSGSKD----KSIINHDVRVSNNVTSCIKA 142 (335)
Q Consensus 75 ~~~~dg~i~iw~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~ 142 (335)
+|+.||.|++||+.++ +....+..|...|.+++|+| ++++|++++.+ +.|++||. +. ....+.+
T Consensus 83 s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~--~~-~~~~~~~ 158 (615)
T 1pgu_A 83 SGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDS--GN-SLGEVSG 158 (615)
T ss_dssp EEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTT--CC-EEEECCS
T ss_pred EecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEEC--CC-cceeeec
Confidence 9999999999999754 67778888999999999999 99999999988 78999983 33 4666788
Q ss_pred CCCCEEEEEeecCCC-EEEEEeCCCeEEEEEccCCCcccceeeccCCCC---CeeEEEecCC-CCcEEEEecCCCCCeEE
Q 019847 143 HSGEVCGLKWSNEGN-LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCG---GVKALAWSPH-QVNVLATGGGREDGCIK 217 (335)
Q Consensus 143 ~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~g~~d~~i~ 217 (335)
|...|.+++|+|+++ .+++++.|+.|++||++. .+.+..+..|.. .|.+++|+|+ +. ++++++ .|+.|+
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~--~dg~i~ 232 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVG--SDRKIS 232 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEE--TTCCEE
T ss_pred CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeecccCCCCceEEEEEECCCCCC-EEEEEe--CCCeEE
Confidence 999999999999987 899999999999999765 455777788888 9999999999 75 555554 799999
Q ss_pred EEECCCCceEEEe-----ecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC----CCceeEeE
Q 019847 218 IWNVQKGTCIHGI-----DAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS----NSRILDLS 288 (335)
Q Consensus 218 i~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~i~~~~ 288 (335)
+||+++++.+..+ .+...+.+++|+ ++..++++ +.|+.|++||+.+++.+..+..+ ...+.++.
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATV------GADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEE------ETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEE------cCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEE
Confidence 9999999999998 566789999999 99988887 67999999999999998888776 35678888
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCCcccccccccccee
Q 019847 289 QSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKT 331 (335)
Q Consensus 289 ~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~ 331 (335)
|+ ++.++++++.||.|++||+...+.......|...|.++.+
T Consensus 306 ~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 347 (615)
T 1pgu_A 306 AT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV 347 (615)
T ss_dssp EE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET
T ss_pred eC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe
Confidence 86 8889999999999999999987666666677777776654
No 62
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.7e-40 Score=315.02 Aligned_cols=310 Identities=18% Similarity=0.298 Sum_probs=257.1
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+.+++|+++ .+++++.|+.|++||+.+++.. ..+.+|...|.+++|+|++++|++++.||.|++||+.+++.
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL--LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL 691 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE--EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce
Confidence 4567889999984 5666788999999999998864 45669999999999999999999999999999999999999
Q ss_pred EeeecccccceeEeeecCC-CCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEE
Q 019847 93 VRNLEGHHRRVATSSWNHW-NGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIW 171 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iw 171 (335)
+..+..|...|.+++|+|. +..++++|+.|+.|++||++++.. ...+.+|...|.+++|+|++++|++++.||.|++|
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 9999999999999999984 345899999999999999997664 56678899999999999999999999999999999
Q ss_pred EccCCCcccce---------------------------------------------------e-eccCCCCCeeEEEecC
Q 019847 172 ERSKMSSSKSL---------------------------------------------------H-RFTDHCGGVKALAWSP 199 (335)
Q Consensus 172 d~~~~~~~~~~---------------------------------------------------~-~~~~~~~~v~~~~~~~ 199 (335)
|++.......+ . ...+|...+.+++|+|
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 98754221111 0 1126778899999999
Q ss_pred CCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEEEeCCCCceeeeeee-------------------------
Q 019847 200 HQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGLEWNRHHKEILSGHG------------------------- 253 (335)
Q Consensus 200 ~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------------------------- 253 (335)
++..++ +++ .|+.|++||+.++..+..+..+ ..+.+++|+|++..++++..
T Consensus 851 ~~~~l~-~~~--~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~ 927 (1249)
T 3sfz_A 851 YDHLAV-IAL--SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEID 927 (1249)
T ss_dssp STTEEE-EEC--SSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEE
T ss_pred CCCEEE-EEe--CCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceee
Confidence 996544 444 7999999999999888887654 57899999999888776621
Q ss_pred ------------------------------------------------eeeecCCCeEEEEECCCCceeecccCCCCcee
Q 019847 254 ------------------------------------------------FSASGDGNKLCLWKYPNMTKVGELQSSNSRIL 285 (335)
Q Consensus 254 ------------------------------------------------~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~ 285 (335)
+++++.+|.|++||+.+++....+.+|...|+
T Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~ 1007 (1249)
T 3sfz_A 928 VVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVR 1007 (1249)
T ss_dssp EEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCC
T ss_pred EEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceE
Confidence 23456677778888888888888889999999
Q ss_pred EeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCcccccccccccee
Q 019847 286 DLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKT 331 (335)
Q Consensus 286 ~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~ 331 (335)
+++|+|++++|++++.||.|++|++..+.... ...|...+.++.+
T Consensus 1008 ~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 1008 HIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRL 1052 (1249)
T ss_dssp CEEECSSSSCEEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEE
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEE
Confidence 99999999999999999999999998875543 4466666666554
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=277.02 Aligned_cols=292 Identities=15% Similarity=0.221 Sum_probs=231.6
Q ss_pred ccccceeeeecC-C--ceEEEecCCeEEEEEecCCceeeEEee-----------cCCCCCceEEEEcC-CCCEEEEEECC
Q 019847 15 EDYYSKVIDWGR-N--NVLAVALGPVLFLWKWENGKVKKLLQV-----------PGEDDYPTSVSWSH-DAKTLAVGYMD 79 (335)
Q Consensus 15 ~~~~~~~~~~~~-~--~~~~~~~~~~i~vw~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~-~~~~l~~~~~d 79 (335)
+...+.+++|++ + .+++++.||.|++||+++++....... .+|...|.+++|+| ++++|++++.|
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 567889999987 3 577778899999999998765444332 25999999999999 78899999999
Q ss_pred CcEEEEeCCCceeEeeecccccceeEeeecCC--CCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCC
Q 019847 80 SKLQLWDAETSKLVRNLEGHHRRVATSSWNHW--NGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGN 157 (335)
Q Consensus 80 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (335)
|.|++||+.+++....+. +...+.++.|++. ++.++++++.+|.|++||++++.. ...+..|...|.+++|+|+++
T Consensus 122 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEECCCCSCEEEEEECSSCT
T ss_pred CeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeeecCCCCcEEEEEECCCCC
Confidence 999999999999888876 7788999999883 334999999999999999986654 566788999999999999988
Q ss_pred -EEEEEeCCCeEEEEEccCCCccc-------------ceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC
Q 019847 158 -LLASGGDDNVVRIWERSKMSSSK-------------SLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK 223 (335)
Q Consensus 158 -~l~~~~~dg~i~iwd~~~~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~ 223 (335)
+|++++.||.|++||++...... .......|...|.+++|+|++..+++.+ .|+.|++||+++
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~vwd~~~ 276 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG---TDNRMRLWNSSN 276 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE---TTSCEEEEETTT
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec---CCCeEEEEECCC
Confidence 58999999999999998653111 1122256889999999999987555544 799999999999
Q ss_pred CceEEEeecC------CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEE
Q 019847 224 GTCIHGIDAK------AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVA 297 (335)
Q Consensus 224 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 297 (335)
++........ ...........+..++.+ +.++.|++||+.+++++..+.+|...|++++|+|++++|+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFV------PYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEE------EETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred CccceeccccccccccccceeEEecCCCceEEEE------ecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEE
Confidence 8765444321 112222222233333333 5589999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCC
Q 019847 298 TAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 298 ~~~~dg~v~iw~~~~~~~~~ 317 (335)
+++.||.|++|++...+...
T Consensus 351 s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 351 SGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEETTSCEEEEEECC-----
T ss_pred EECCCCeEEEEeCCCCCccC
Confidence 99999999999999876554
No 64
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.9e-39 Score=277.12 Aligned_cols=287 Identities=21% Similarity=0.371 Sum_probs=244.7
Q ss_pred cceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 18 YSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.+.+++++++.+++++.|+.|++||+.+++.. ..+.+|...|.+++|+ ++++++|+.||.|++||+.+++.+..+.
T Consensus 121 v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 121 VITCLQFCGNRIVSGSDDNTLKVWSAVTGKCL--RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTCCEE--EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cEEEEEEcCCEEEEEECCCcEEEEECCCCcEE--EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC
Confidence 45789999889999999999999999998864 4567999999999997 6699999999999999999999999999
Q ss_pred ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCC
Q 019847 98 GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMS 177 (335)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 177 (335)
+|...|.++.|+ ++.+++|+.||.|++||+++++. ...+.+|...|.+++| +++++++++.||.|++||+++.
T Consensus 197 ~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~- 269 (445)
T 2ovr_B 197 GHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETE- 269 (445)
T ss_dssp CCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCE-EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGT-
T ss_pred CCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcE-EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCC-
Confidence 999999999994 57899999999999999987654 5667889999999998 6789999999999999998763
Q ss_pred cccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEEEeCCCCceeeeeeeeee
Q 019847 178 SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGLEWNRHHKEILSGHGFSA 256 (335)
Q Consensus 178 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (335)
+.+..+.+|...|.++.| ++. .+++++ .|+.|++||+++++.+..+..+ ..+.++.+ ++..++++
T Consensus 270 --~~~~~~~~~~~~v~~~~~--~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~----- 335 (445)
T 2ovr_B 270 --TCLHTLQGHTNRVYSLQF--DGI-HVVSGS--LDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSG----- 335 (445)
T ss_dssp --EEEEEECCCSSCEEEEEE--CSS-EEEEEE--TTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEE-----
T ss_pred --cEeEEecCCCCceEEEEE--CCC-EEEEEe--CCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEE-----
Confidence 557777889999999999 454 455555 7999999999999999888754 45666666 45677766
Q ss_pred ecCCCeEEEEECCCCceeecccC---CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCc-----ccccccccc
Q 019847 257 SGDGNKLCLWKYPNMTKVGELQS---SNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDS-----VSHLAGLVS 328 (335)
Q Consensus 257 ~~~~~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~-----~~~~~~i~~ 328 (335)
+.|+.|++||+++++.+..+.. |...|++++|+ +++|++|+.||.|++||+..++..... ..|...|.+
T Consensus 336 -~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 412 (445)
T 2ovr_B 336 -NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWR 412 (445)
T ss_dssp -ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEE
T ss_pred -eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEE
Confidence 7799999999999999988876 88899999996 569999999999999999988765544 356667777
Q ss_pred ceec
Q 019847 329 LKTS 332 (335)
Q Consensus 329 ~~~~ 332 (335)
+.++
T Consensus 413 ~~~s 416 (445)
T 2ovr_B 413 IRAS 416 (445)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7664
No 65
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.2e-40 Score=282.74 Aligned_cols=285 Identities=16% Similarity=0.272 Sum_probs=230.5
Q ss_pred cccceeeeecCCceEE---EecCCeEEEEEecCCce--eeEEeecCCCCCceEEEEcC-CCCEEEEEECCCcEEEEeCCC
Q 019847 16 DYYSKVIDWGRNNVLA---VALGPVLFLWKWENGKV--KKLLQVPGEDDYPTSVSWSH-DAKTLAVGYMDSKLQLWDAET 89 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~---~~~~~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~ 89 (335)
......++++++.... ++.+|.|+||+++.... .....+.+|...|++++|+| ++++|++|+.||.|++||+.+
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 34 TWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp CCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred ccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 3455668888875433 46799999999865432 12334678999999999999 999999999999999999998
Q ss_pred c-------eeEeeecccccceeEeeecCCCC-CEEEEeeCCCcEEEEecccCCeeeEEe--ecCCCCEEEEEeecCCCEE
Q 019847 90 S-------KLVRNLEGHHRRVATSSWNHWNG-HILTSGSKDKSIINHDVRVSNNVTSCI--KAHSGEVCGLKWSNEGNLL 159 (335)
Q Consensus 90 ~-------~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l 159 (335)
+ +.+..+.+|...|.+++|+| ++ ++|++++.||.|++||+++++. ...+ ..|...|.+++|+|++++|
T Consensus 114 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTKRVGIVAWHP-TAQNVLLSAGCDNVILVWDVGTGAA-VLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp TCCSSCBCSCSEEEECCSSCEEEEEECS-SBTTEEEEEETTSCEEEEETTTTEE-EEEECTTTCCSCEEEEEECTTSSCE
T ss_pred CCCccccCCceEEecCCCCeEEEEEECc-CCCCEEEEEcCCCEEEEEECCCCCc-cEEEecCCCCCceEEEEECCCCCEE
Confidence 7 56778889999999999999 65 7999999999999999997654 4555 7899999999999999999
Q ss_pred EEEeCCCeEEEEEccCCCcccceeec-cCCCCC-eeEEEecCCCCcEEEEe-cCCCCCeEEEEECCCCce---EEEeecC
Q 019847 160 ASGGDDNVVRIWERSKMSSSKSLHRF-TDHCGG-VKALAWSPHQVNVLATG-GGREDGCIKIWNVQKGTC---IHGIDAK 233 (335)
Q Consensus 160 ~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~~~~-~g~~d~~i~i~d~~~~~~---~~~~~~~ 233 (335)
++++.||.|++||+++. +.+..+ ..|.+. +.++.|+|++. +++++ ++..|+.|++||+++++. ...+.+.
T Consensus 192 ~~~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 267 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRKG---TVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS 267 (402)
T ss_dssp EEEETTSEEEEEETTTT---EEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC
T ss_pred EEEecCCcEEEEeCCCC---ceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCC
Confidence 99999999999998874 345555 567665 89999999985 55555 112799999999998764 3334456
Q ss_pred CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce-eecccC--CCCceeEeEEcCCCCEEEEEeCCCcEEEEec
Q 019847 234 AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK-VGELQS--SNSRILDLSQSPDGLTVATAGADETIRFWEA 310 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~-~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~ 310 (335)
..+.+++|+|+++.++++ ++.|+.|++||+.++++ +..+.. |...|.+++|+|++.++++ .++.+++|++
T Consensus 268 ~~v~~~~~s~~~~~l~~~-----g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l 340 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLC-----GKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKL 340 (402)
T ss_dssp SSCEEEEEETTTTEEEEE-----ETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEE
T ss_pred CceeEEEEcCCCCEEEEE-----EcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEc
Confidence 789999999999988643 25799999999998874 444433 5588999999999988764 5679999999
Q ss_pred CCC
Q 019847 311 FGP 313 (335)
Q Consensus 311 ~~~ 313 (335)
...
T Consensus 341 ~~~ 343 (402)
T 2aq5_A 341 HER 343 (402)
T ss_dssp ETT
T ss_pred CCC
Confidence 864
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.5e-39 Score=298.26 Aligned_cols=286 Identities=17% Similarity=0.265 Sum_probs=247.9
Q ss_pred cccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 14 MEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
.+...+.+++|+++ .+++++.+|.|++||+++++... .+.+|...|.+++|+|++++|++|+.||.|++||+.+++
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE--EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 35567899999985 46667789999999999987654 455899999999999999999999999999999999999
Q ss_pred eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEE
Q 019847 92 LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRI 170 (335)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i 170 (335)
.+..+..|...|++++|+| ++..|++++.||.|++||++++......+.+|...|.+++|+| +++.|++++.||.|++
T Consensus 89 ~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~v 167 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (814)
T ss_dssp EEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred EEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 9999999999999999999 9999999999999999999987677788889999999999999 8899999999999999
Q ss_pred EEccCCCcccceeecc-CCCCCeeEEEecC--CCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCc
Q 019847 171 WERSKMSSSKSLHRFT-DHCGGVKALAWSP--HQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHK 246 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~ 246 (335)
||++.... ...+. .+...+.+++|+| ++. ++++++ .||.|++||+++++.+..+.. ...+.+++|+|++.
T Consensus 168 wd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 168 WSLGQSTP---NFTLTTGQERGVNYVDYYPLPDKP-YMITAS--DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp EETTCSSC---SEEEECCCTTCCCEEEECCSTTCC-EEEEEC--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred EECCCCcc---eeEEecCCCCCEEEEEEEECCCCC-EEEEEe--CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 99876433 33333 3448899999999 776 455554 799999999999999888874 56899999999999
Q ss_pred eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCE-EEEEeCCCcEEEEecCCCC
Q 019847 247 EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLT-VATAGADETIRFWEAFGPS 314 (335)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~iw~~~~~~ 314 (335)
.++++ +.||.|++||+.+++.+..+..|...+.+++|+|++.. +++++.|+.+.+|++....
T Consensus 242 ~l~~~------~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 242 IIISG------SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp EEEEE------ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCS
T ss_pred EEEEE------eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCC
Confidence 99887 67999999999999999999999999999999999863 2445557778899887643
No 67
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-39 Score=269.88 Aligned_cols=275 Identities=19% Similarity=0.281 Sum_probs=239.3
Q ss_pred CCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCc
Q 019847 45 NGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKS 124 (335)
Q Consensus 45 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 124 (335)
.|...+...+.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+| ++++|++++.||.
T Consensus 19 ~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~ 97 (369)
T 3zwl_B 19 QGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYS 97 (369)
T ss_dssp SCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTE
T ss_pred eccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCe
Confidence 455667778889999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred EEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCC-----CeEEEEEccCCCccc--------ceeeccCCCC-
Q 019847 125 IINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDD-----NVVRIWERSKMSSSK--------SLHRFTDHCG- 190 (335)
Q Consensus 125 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~--------~~~~~~~~~~- 190 (335)
|++||+++++.. ..+. +...+.+++|+|+++++++++.+ |.|++||++...... ....+..|..
T Consensus 98 i~iwd~~~~~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 98 IKLWDVSNGQCV-ATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEETTTCCEE-EEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EEEEECCCCcEE-EEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 999999877653 3344 88999999999999999999999 999999988654322 2333445555
Q ss_pred -CeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-CceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEE
Q 019847 191 -GVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-GTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWK 267 (335)
Q Consensus 191 -~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d 267 (335)
.+.+++|+|++..+++ ++ .||.|++||+++ ++.+..+.. ...+.+++|+|++.+++++ +.|+.|++||
T Consensus 176 ~~~~~~~~~~~~~~l~~-~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------~~d~~i~v~d 246 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIA-GH--KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITS------SRDTNSFLVD 246 (369)
T ss_dssp CCEEEEEECGGGCEEEE-EE--TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEE------ETTSEEEEEE
T ss_pred cceeEEEEcCCCCEEEE-Ec--CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEe------cCCceEEEEE
Confidence 8999999999975555 44 799999999998 677777764 5689999999999999887 6799999999
Q ss_pred CCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCC--------------cEEEEecCCCCCCCCccccccccccceec
Q 019847 268 YPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADE--------------TIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 268 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------------~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
+.+++.+..+. +...+..++|+|+++++++++.++ .+++||+...+.......|...|.++.++
T Consensus 247 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 247 VSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAIS 324 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEEC
Confidence 99999988887 677899999999999999999988 89999999988877778888888888775
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.7e-39 Score=288.14 Aligned_cols=307 Identities=15% Similarity=0.197 Sum_probs=234.3
Q ss_pred cccc-ceeeeecC--C--ceEEEecCCeEEEEEecCC------ceeeEEeecC---------------------------
Q 019847 15 EDYY-SKVIDWGR--N--NVLAVALGPVLFLWKWENG------KVKKLLQVPG--------------------------- 56 (335)
Q Consensus 15 ~~~~-~~~~~~~~--~--~~~~~~~~~~i~vw~~~~~------~~~~~~~~~~--------------------------- 56 (335)
+... +.+++|++ + .+++++.|+.|++||+.++ +......+..
T Consensus 62 h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 141 (615)
T 1pgu_A 62 HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNF 141 (615)
T ss_dssp TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCS
T ss_pred CCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCc
Confidence 4456 88999998 4 4666778999999999755 2222333333
Q ss_pred -----------------CCCCceEEEEcCCCC-EEEEEECCCcEEEEeCCCceeEeeeccccc---ceeEeeecCCC-CC
Q 019847 57 -----------------EDDYPTSVSWSHDAK-TLAVGYMDSKLQLWDAETSKLVRNLEGHHR---RVATSSWNHWN-GH 114 (335)
Q Consensus 57 -----------------~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~-~~ 114 (335)
|...|.+++|+|+++ ++++++.||.|++||+.+++.+..+..|.. .|.+++|+| + ++
T Consensus 142 ~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 220 (615)
T 1pgu_A 142 GVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP-DSGE 220 (615)
T ss_dssp EEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS-TTCC
T ss_pred cEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC-CCCC
Confidence 444555555555555 677888889999999999999999999999 999999999 7 99
Q ss_pred EEEEeeCCCcEEEEecccCCeeeEEee---cCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc------------
Q 019847 115 ILTSGSKDKSIINHDVRVSNNVTSCIK---AHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS------------ 179 (335)
Q Consensus 115 ~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------------ 179 (335)
+|++++.||.|++||+++++....... .|...|.+++|+ ++++|++++.||.|++||+++....
T Consensus 221 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 299 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 299 (615)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG
T ss_pred EEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccC
Confidence 999999999999999987765443325 899999999999 9999999999999999998753211
Q ss_pred ------------------------------cceeeccCCCCCeeEEEecCC-----------------------------
Q 019847 180 ------------------------------KSLHRFTDHCGGVKALAWSPH----------------------------- 200 (335)
Q Consensus 180 ------------------------------~~~~~~~~~~~~v~~~~~~~~----------------------------- 200 (335)
+.+..+.+|...|.+++| |+
T Consensus 300 ~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~ 378 (615)
T 1pgu_A 300 QQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSL 378 (615)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEE
T ss_pred ceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEE
Confidence 112223344444444444 22
Q ss_pred ----CCcEEEE---------------------------------------------------------------------
Q 019847 201 ----QVNVLAT--------------------------------------------------------------------- 207 (335)
Q Consensus 201 ----~~~~~~~--------------------------------------------------------------------- 207 (335)
+..+++.
T Consensus 379 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (615)
T 1pgu_A 379 DNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNY 458 (615)
T ss_dssp ECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSE
T ss_pred EECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCE
Confidence 3222222
Q ss_pred ---ecCCC-CCeEEEEECCCCceE-EEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC-C
Q 019847 208 ---GGGRE-DGCIKIWNVQKGTCI-HGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS-S 280 (335)
Q Consensus 208 ---~~g~~-d~~i~i~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~ 280 (335)
++ . |+.|++||+.+++.. ..+. +...+.+++|+|++++++++ +.|+.|++||+.+++.+..+.+ |
T Consensus 459 l~~~~--~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~------~~dg~i~iw~~~~~~~~~~~~~~h 530 (615)
T 1pgu_A 459 VAVGL--EEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG------DVMGKILLYDLQSREVKTSRWAFR 530 (615)
T ss_dssp EEEEE--TTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEE------ETTSCEEEEETTTTEEEECCSCCC
T ss_pred EEEee--cCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEc------CCCCeEEEeeCCCCcceeEeecCC
Confidence 21 3 555555555554433 2222 34679999999999999988 6799999999999999999988 9
Q ss_pred CCceeEeEEcC----------CCCEEEEEeCCCcEEEEecCCC-CCCCCccccccccccceec
Q 019847 281 NSRILDLSQSP----------DGLTVATAGADETIRFWEAFGP-SGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 281 ~~~i~~~~~~~----------~~~~l~~~~~dg~v~iw~~~~~-~~~~~~~~~~~~i~~~~~~ 332 (335)
...|++++|+| ++++|++++.||.|++|++..+ +......+|...|.++.++
T Consensus 531 ~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s 593 (615)
T 1pgu_A 531 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 593 (615)
T ss_dssp SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEE
T ss_pred CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEc
Confidence 99999999999 9999999999999999999987 5555677898999888875
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.7e-40 Score=277.58 Aligned_cols=282 Identities=14% Similarity=0.136 Sum_probs=213.8
Q ss_pred cccceeeeecCC-ceEEEec--------CCeEEEEEecCCce--------eeEEeecCCCCCceEEEEcCCCCEEEEEE-
Q 019847 16 DYYSKVIDWGRN-NVLAVAL--------GPVLFLWKWENGKV--------KKLLQVPGEDDYPTSVSWSHDAKTLAVGY- 77 (335)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~--------~~~i~vw~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~- 77 (335)
.+++.+++|+++ .+++++. ++.|++|+++.+.. .....+.+|...|.++++ +++.+++|.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEEC
Confidence 578999999985 4555443 23599999976542 223456788899998876 455677653
Q ss_pred ----------CCCcEEEEeCCCceeEe----ee-----cccccceeEeeecCCCCCEEEE--eeCCCcEEEEecccCCee
Q 019847 78 ----------MDSKLQLWDAETSKLVR----NL-----EGHHRRVATSSWNHWNGHILTS--GSKDKSIINHDVRVSNNV 136 (335)
Q Consensus 78 ----------~dg~i~iw~~~~~~~~~----~~-----~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~~~d~~~~~~~ 136 (335)
.|+.+++|++.+.+... .. ..+...+.+++|+| +++++++ ++.|++|++||+++....
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 47789999986543211 11 12345688999999 8988764 447899999999876654
Q ss_pred eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC--
Q 019847 137 TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG-- 214 (335)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~-- 214 (335)
.. + .|...|.+++|+|+++++++++.+ .+.+|+..+... ........|...|.+++|+|++..+++.+ .|+
T Consensus 171 ~~-~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~-~~~~~~~~~~~~v~~v~fspdg~~l~~~s---~d~~~ 243 (365)
T 4h5i_A 171 FE-I-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC-IARKTDFDKNWSLSKINFIADDTVLIAAS---LKKGK 243 (365)
T ss_dssp EE-E-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE-EEEECCCCTTEEEEEEEEEETTEEEEEEE---ESSSC
T ss_pred EE-e-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcc-eeeeecCCCCCCEEEEEEcCCCCEEEEEe---cCCcc
Confidence 33 3 478889999999999999999855 566666554322 12234456888899999999997666654 354
Q ss_pred --eEEEEECCCCceE----EEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecc-cCCCCceeE
Q 019847 215 --CIKIWNVQKGTCI----HGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGEL-QSSNSRILD 286 (335)
Q Consensus 215 --~i~i~d~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~i~~ 286 (335)
.+++||+...... ..+. +...|.+++|+|+|+++++| +.|+.|+|||+.+++++..+ .+|..+|++
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg------s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~ 317 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA------SNDNSIALVKLKDLSMSKIFKQAHSFAITE 317 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE------ETTSCEEEEETTTTEEEEEETTSSSSCEEE
T ss_pred eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE------cCCCEEEEEECCCCcEEEEecCcccCCEEE
Confidence 6889998776542 2233 34679999999999999988 77999999999999999874 789999999
Q ss_pred eEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 287 LSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 287 ~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
++|+|||++|++|+.|++|+||++...
T Consensus 318 v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999999999654
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.3e-39 Score=269.28 Aligned_cols=255 Identities=20% Similarity=0.336 Sum_probs=215.1
Q ss_pred ecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc----eeEeeecccccceeEeeecCC-CCCEEEEeeCCCcEEEE
Q 019847 54 VPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS----KLVRNLEGHHRRVATSSWNHW-NGHILTSGSKDKSIINH 128 (335)
Q Consensus 54 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~~ 128 (335)
+.+|...|++++|+|++++|++|+.||.|++||+.++ +....+..|...|.+++|+|. ++++|++++.||.|++|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 4689999999999999999999999999999999876 467778889999999999985 48999999999999999
Q ss_pred ecccCC--------eeeEEeecCCCCEEEEEeecC--CCEEEEEeCCCeEEEEEccCCCccccee----------eccCC
Q 019847 129 DVRVSN--------NVTSCIKAHSGEVCGLKWSNE--GNLLASGGDDNVVRIWERSKMSSSKSLH----------RFTDH 188 (335)
Q Consensus 129 d~~~~~--------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------~~~~~ 188 (335)
|++.+. .....+..|...|.+++|+|+ +++|++++.||.|++||+++......+. ....|
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 998654 446667789999999999999 9999999999999999998765433221 11257
Q ss_pred CCCeeEEEecCC--CCcEEEEecCCCCCeEEEEECCCCce--EEEee-cCCcEeEEEeCCCC----ceeeeeeeeeeecC
Q 019847 189 CGGVKALAWSPH--QVNVLATGGGREDGCIKIWNVQKGTC--IHGID-AKAQICGLEWNRHH----KEILSGHGFSASGD 259 (335)
Q Consensus 189 ~~~v~~~~~~~~--~~~~~~~~~g~~d~~i~i~d~~~~~~--~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 259 (335)
...+.+++|+|+ ...++++++ .++.+.+|+...++. +..+. +...+.+++|+|++ .+++++ +.
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~------~~ 238 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSA--LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG------CK 238 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEE--TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE------ET
T ss_pred ccceeEEEeccCCCCCcEEEEec--CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEE------cC
Confidence 788999999997 234555555 799998888887765 44444 35689999999998 777777 78
Q ss_pred CCeEEEEECCCC----------------------------------------------ceeecccCCCCceeEeEEcCCC
Q 019847 260 GNKLCLWKYPNM----------------------------------------------TKVGELQSSNSRILDLSQSPDG 293 (335)
Q Consensus 260 ~~~i~i~d~~~~----------------------------------------------~~~~~~~~~~~~i~~~~~~~~~ 293 (335)
|+.|++||++++ +.+..+.+|...|++++|+|++
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 999999999765 5667788899999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCC
Q 019847 294 LTVATAGADETIRFWEAFGPSGD 316 (335)
Q Consensus 294 ~~l~~~~~dg~v~iw~~~~~~~~ 316 (335)
++|++++.||.|++|++..++..
T Consensus 319 ~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 319 TILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp CCEEEEETTSCEEEEEECTTSCE
T ss_pred CEEEEecCCCcEEEEecCcCcch
Confidence 99999999999999999976543
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.6e-40 Score=278.71 Aligned_cols=269 Identities=15% Similarity=0.163 Sum_probs=229.6
Q ss_pred EEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce------eEeeecccccceeEeeecCCC----C---CEEE
Q 019847 51 LLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK------LVRNLEGHHRRVATSSWNHWN----G---HILT 117 (335)
Q Consensus 51 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~~----~---~~l~ 117 (335)
...+.+|...|++++|+| ++|++|+.||.|++||+.+++ .+..+..|...|.+++|+| + + ++|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVA 85 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEE
Confidence 445678999999999998 799999999999999999887 7888889999999999999 7 8 9999
Q ss_pred EeeCCCcEEEEecccCCe----eeEEeecC-----CCCEEEEEee----cCCCE-EEEEeCCCeEEEEEccC------CC
Q 019847 118 SGSKDKSIINHDVRVSNN----VTSCIKAH-----SGEVCGLKWS----NEGNL-LASGGDDNVVRIWERSK------MS 177 (335)
Q Consensus 118 ~~~~dg~i~~~d~~~~~~----~~~~~~~~-----~~~i~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------~~ 177 (335)
+++.||.|++||+.+... ....+..| ...|.+++|+ |++++ |++++.||.|++||++. ..
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 165 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL 165 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc
Confidence 999999999999987653 14556677 5899999999 99999 99999999999999987 33
Q ss_pred ccc--ceeec-------cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-------CCcEeEEEe
Q 019847 178 SSK--SLHRF-------TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-------KAQICGLEW 241 (335)
Q Consensus 178 ~~~--~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~~ 241 (335)
... ....+ ..|...|.+++|+|++ ++++++ .|+.|++||+++++.+..+.. ...+.+++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 166 TLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred eeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 322 00133 4578899999999998 555655 899999999999999999886 678999999
Q ss_pred CCCCceeeeeeeeeeecCC---CeEEEEECCCCceeecccC-------------CCCceeEeEEcCCCCEEEEEeCCCcE
Q 019847 242 NRHHKEILSGHGFSASGDG---NKLCLWKYPNMTKVGELQS-------------SNSRILDLSQSPDGLTVATAGADETI 305 (335)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~---~~i~i~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~dg~v 305 (335)
+|++.+++++ +.| +.|++||+.+++.+..+.. |...|.+++|+|++++|++++.||.|
T Consensus 242 ~~~~~~l~~~------~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 242 SPQGSLLAIA------HDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp CSSTTEEEEE------EEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred CCCCCEEEEE------ecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 9999999887 557 9999999999999999988 99999999999999999999999999
Q ss_pred EEEecCCCCCCCCcc------cc---------------ccccccceec
Q 019847 306 RFWEAFGPSGDEDSV------SH---------------LAGLVSLKTS 332 (335)
Q Consensus 306 ~iw~~~~~~~~~~~~------~~---------------~~~i~~~~~~ 332 (335)
++||+...+...... .| ...|.++.++
T Consensus 316 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 316 RFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 363 (397)
T ss_dssp EEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred EEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEec
Confidence 999999877666555 55 7777777664
No 72
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.1e-39 Score=267.46 Aligned_cols=278 Identities=14% Similarity=0.134 Sum_probs=232.1
Q ss_pred cccccceeeeecCC--ceEEEecCCeEEEEEecCCc-eeeEEeecCCCCCceEEEEcCCCC-EEEEEECCCcEEEEeC-C
Q 019847 14 MEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGK-VKKLLQVPGEDDYPTSVSWSHDAK-TLAVGYMDSKLQLWDA-E 88 (335)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~-~ 88 (335)
.+...+.+++|+++ .+++++.|+.|++|++++++ ......+.+|...|.+++|+|+++ +|++|+.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 45567889999974 57777899999999999877 112233447899999999999999 9999999999999999 7
Q ss_pred CceeEeeecc--cccceeEeeecCCCCCEEEEeeCCCcEEEEeccc---------CCeeeEEeecCCCCEEEEEeecCCC
Q 019847 89 TSKLVRNLEG--HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRV---------SNNVTSCIKAHSGEVCGLKWSNEGN 157 (335)
Q Consensus 89 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~---------~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (335)
+++. ..+.. |...|.+++|+| ++.|++++.|+.|++||+++ ... ...+. |...+.+++|+|++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN-SNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESC-SSSSS-SCCCEEEEEECSSE-
T ss_pred CCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCe-eeEEe-eCCceEEEEecCCc-
Confidence 7754 67778 999999999998 88999999999999999986 443 33333 88999999999986
Q ss_pred EEEEEeCCCeEEEEEccC-CCcccceeeccCCCCCeeEEEecC-CCCcEEEEecCCCCCeEEEEECCCC------ceEEE
Q 019847 158 LLASGGDDNVVRIWERSK-MSSSKSLHRFTDHCGGVKALAWSP-HQVNVLATGGGREDGCIKIWNVQKG------TCIHG 229 (335)
Q Consensus 158 ~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~g~~d~~i~i~d~~~~------~~~~~ 229 (335)
+++++.|+.|++||++. ... ........|...+.+++|+| ++. ++++++ .||.|++|+++.. +....
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRDVALLPKEQE-GYACSS--IDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEEEEECSGGGC-EEEEEE--TTSEEEEEECCTTCCSTTCTTCEE
T ss_pred -EEEEeCCCeEEEEECCccccc-cceeeecCCCCceeEEEECCCCCC-EEEEEe--cCCcEEEEEEcCCCccccccccee
Confidence 99999999999999987 432 22334456788999999999 886 455554 7999999999887 66667
Q ss_pred eecCC----------cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC-CCceeEeEEcCCCCEEEE
Q 019847 230 IDAKA----------QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-NSRILDLSQSPDGLTVAT 298 (335)
Q Consensus 230 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~ 298 (335)
+..+. .+.+++|+|++++++++ +.||.|++||+.+++.+..+..| ..+|++++ |++++|++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~------~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s 309 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA------GSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCL 309 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEE------ETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEE
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEe------cCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEE
Confidence 76542 89999999999999887 67999999999999999999998 99999999 99999999
Q ss_pred EeCCCc-EEEEec
Q 019847 299 AGADET-IRFWEA 310 (335)
Q Consensus 299 ~~~dg~-v~iw~~ 310 (335)
++.||. .+.|..
T Consensus 310 ~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 310 ATSDDTFKTNAAI 322 (342)
T ss_dssp EEECTHHHHCSSS
T ss_pred EecCCcccccccc
Confidence 999998 665554
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.9e-39 Score=272.44 Aligned_cols=246 Identities=15% Similarity=0.201 Sum_probs=215.1
Q ss_pred CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce--eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccC
Q 019847 56 GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK--LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVS 133 (335)
Q Consensus 56 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 133 (335)
.|..+|++++|+|++++|++++.||.|++||+.+++ .+..+..|...|.+++|+| ++++|++++.||.|++||+++.
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCCC
Confidence 488999999999999999999999999999999987 8888999999999999999 9999999999999999999866
Q ss_pred Cee-eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceee-ccCCCCCeeEEEecCCCCcEEEEecCC
Q 019847 134 NNV-TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHR-FTDHCGGVKALAWSPHQVNVLATGGGR 211 (335)
Q Consensus 134 ~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~g~ 211 (335)
+.. ...+..|...|.+++|+|++++|++++.|+.|++||++.......... ...|...|.+++|+|++..+ ++++
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~-- 161 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL-AAGS-- 161 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE-EEEE--
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE-EEEc--
Confidence 532 223467899999999999999999999999999999987543222333 35688999999999998654 4544
Q ss_pred CCCeEEEEEC------------------CCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc
Q 019847 212 EDGCIKIWNV------------------QKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT 272 (335)
Q Consensus 212 ~d~~i~i~d~------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~ 272 (335)
.|+.|++||+ ..++.+..+.. ...+.+++|+|++.+++++ +.|+.|++||+++++
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV------SHDSTVCLADADKKM 235 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEE------ETTTEEEEEEGGGTT
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEE------eCCCEEEEEECCCCc
Confidence 7999999995 46777777754 5689999999999999887 679999999999999
Q ss_pred eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 273 KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 273 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
.+..+..|..+|.+++|+|++++|+++ .|+.|++|++..
T Consensus 236 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 236 AVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred eeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999999999988877 899999999987
No 74
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.7e-39 Score=276.63 Aligned_cols=253 Identities=21% Similarity=0.388 Sum_probs=218.1
Q ss_pred EeecCCCCCceEEEEcCC-CCEEEEEECCCcEEEEeCCC----------ceeEeeecccccceeEeeecCCCCC-EEEEe
Q 019847 52 LQVPGEDDYPTSVSWSHD-AKTLAVGYMDSKLQLWDAET----------SKLVRNLEGHHRRVATSSWNHWNGH-ILTSG 119 (335)
Q Consensus 52 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~ 119 (335)
.....|...|++++|+|+ +.+|++++.||.|++|++.+ .+.+..+..|...+.+++|+| ++. +|++|
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNP-NLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECT-TSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCC-CCCCeEEEE
Confidence 344578999999999997 78999999999999999986 577788889999999999999 555 99999
Q ss_pred eCCCcEEEEecccCCe------eeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCe
Q 019847 120 SKDKSIINHDVRVSNN------VTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGV 192 (335)
Q Consensus 120 ~~dg~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v 192 (335)
+.||.|++||+..... ....+..|...|.+++|+| ++.+|++++.||.|++||++.......+..+..|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 9999999999986332 1345668999999999999 78899999999999999999765445666777899999
Q ss_pred eEEEecCCCCcEEEEecCCCCCeEEEEECCC-CceEEEee-cCCcEeEEEeCCCCce-eeeeeeeeeecCCCeEEEEECC
Q 019847 193 KALAWSPHQVNVLATGGGREDGCIKIWNVQK-GTCIHGID-AKAQICGLEWNRHHKE-ILSGHGFSASGDGNKLCLWKYP 269 (335)
Q Consensus 193 ~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~i~d~~ 269 (335)
++++|+|++++++++++ .||.|++||+++ .+++..+. +...+.+++|+|+++. ++++ +.|+.|++||+.
T Consensus 281 ~~i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~------~~d~~i~iwd~~ 352 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS------GTDRRLHVWDLS 352 (430)
T ss_dssp EEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEE------ETTSCCEEEEGG
T ss_pred EEEEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEE------eCCCcEEEEeCC
Confidence 99999999988888887 899999999998 55667776 4678999999999975 5555 679999999998
Q ss_pred C--------------CceeecccCCCCceeEeEEcCCCC-EEEEEeCCCcEEEEecCCC
Q 019847 270 N--------------MTKVGELQSSNSRILDLSQSPDGL-TVATAGADETIRFWEAFGP 313 (335)
Q Consensus 270 ~--------------~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~ 313 (335)
. .+.+..+.+|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 7 366777888999999999999998 8999999999999999764
No 75
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5e-39 Score=261.55 Aligned_cols=247 Identities=19% Similarity=0.324 Sum_probs=203.4
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCC--CCEEEEEECCCcEEEEeCCCc
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHD--AKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~ 90 (335)
+...+.+++|+++ .+++++.|+.|++||++.........+.+|...|.+++|+|+ +++|++|+.||+|++||++++
T Consensus 8 h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 8 HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS
T ss_pred CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC
Confidence 4557888888873 677788999999999986544445677899999999999863 899999999999999999887
Q ss_pred e--eEeeecccccceeEeeecCCC-CCEEEEeeCCCcEEEEecccCCe-eeEEeecCCCCEEEEEeecC-----------
Q 019847 91 K--LVRNLEGHHRRVATSSWNHWN-GHILTSGSKDKSIINHDVRVSNN-VTSCIKAHSGEVCGLKWSNE----------- 155 (335)
Q Consensus 91 ~--~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~----------- 155 (335)
+ .+..+..|...|.+++|+|.. +.+|++++.|+.|++||++.... ....+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~ 167 (297)
T 2pm7_B 88 RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----------
T ss_pred ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCC
Confidence 4 556677899999999999932 78999999999999999986542 24567789999999999996
Q ss_pred --CCEEEEEeCCCeEEEEEccCCCc-ccceeeccCCCCCeeEEEecCCC--CcEEEEecCCCCCeEEEEECCCCc---eE
Q 019847 156 --GNLLASGGDDNVVRIWERSKMSS-SKSLHRFTDHCGGVKALAWSPHQ--VNVLATGGGREDGCIKIWNVQKGT---CI 227 (335)
Q Consensus 156 --~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~g~~d~~i~i~d~~~~~---~~ 227 (335)
+++|++|+.|+.|++||++.... ......+.+|...|.+++|+|++ ..++++++ .|++|++||+++.. ..
T Consensus 168 ~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s--~D~~v~iWd~~~~~~~~~~ 245 (297)
T 2pm7_B 168 KESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS--QDRTCIIWTQDNEQGPWKK 245 (297)
T ss_dssp --CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCEE
T ss_pred CCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE--CCCcEEEEEeCCCCCccce
Confidence 57999999999999999986432 12456778999999999999986 46777776 89999999998753 11
Q ss_pred EEe---ecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECC
Q 019847 228 HGI---DAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYP 269 (335)
Q Consensus 228 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~ 269 (335)
..+ .+...+.+++|+|++++++++ +.|+.|++|+..
T Consensus 246 ~~~~~~~~~~~v~~~~~s~~g~~las~------~~D~~v~lw~~~ 284 (297)
T 2pm7_B 246 TLLKEEKFPDVLWRASWSLSGNVLALS------GGDNKVTLWKEN 284 (297)
T ss_dssp EESSSSCCSSCEEEEEECSSSCCEEEE------ETTSCEEEEEEC
T ss_pred eeeecccCCCcEEEEEECCCCCEEEEE------cCCCcEEEEEEC
Confidence 222 235679999999999999887 779999999975
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.4e-39 Score=273.09 Aligned_cols=265 Identities=15% Similarity=0.204 Sum_probs=219.6
Q ss_pred EEeecCCCCCceEEEEcCCC-CEEEEEECCCcEEEEeCCCceeEeeec--ccccceeEeeecCCCCCEEEEeeCCCcEEE
Q 019847 51 LLQVPGEDDYPTSVSWSHDA-KTLAVGYMDSKLQLWDAETSKLVRNLE--GHHRRVATSSWNHWNGHILTSGSKDKSIIN 127 (335)
Q Consensus 51 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 127 (335)
...+.+|...|++++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++|+|.++++|++++.|+.|++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 44567899999999999999 999999999999999999888777665 699999999999966799999999999999
Q ss_pred EecccCCeeeEEeec---CCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcE
Q 019847 128 HDVRVSNNVTSCIKA---HSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNV 204 (335)
Q Consensus 128 ~d~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 204 (335)
||++. .. ...+.. |...|.+++|+|++++|++++.|+.|++||++ ...+..+..|...|.+++|+|+++.+
T Consensus 146 wd~~~-~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 146 RDFSG-SV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD----GHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EETTS-CE-EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT----SCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EECCC-Cc-eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC----CCEEEEeccCCCcEEEEEECCCCCCE
Confidence 99984 33 333433 34789999999999999999999999999984 34577778899999999999999867
Q ss_pred EEEecCCCCCeEEEEECCC----CceEEEeecCCcEeEEEeCC-CCceeeeeeeeeeecCCCeEEEEECCCCceeecccC
Q 019847 205 LATGGGREDGCIKIWNVQK----GTCIHGIDAKAQICGLEWNR-HHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS 279 (335)
Q Consensus 205 ~~~~~g~~d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 279 (335)
+++++ .|+.|++||+++ +..+..+.+...+.+++|+| ++.+++++ +.|+.|++||+++++....+..
T Consensus 220 l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~------~~d~~i~iwd~~~~~~~~~~~~ 291 (383)
T 3ei3_B 220 MATSS--VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT------DQRNEIRVYSSYDWSKPDQIII 291 (383)
T ss_dssp EEEEE--TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE------ESSSEEEEEETTBTTSCSEEEE
T ss_pred EEEEe--CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEE------cCCCcEEEEECCCCcccccccc
Confidence 77776 899999999998 67788888888999999999 99999887 6799999999999887766654
Q ss_pred CC-----------------CceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccc--ccccccccee
Q 019847 280 SN-----------------SRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVS--HLAGLVSLKT 331 (335)
Q Consensus 280 ~~-----------------~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~--~~~~i~~~~~ 331 (335)
|. +.+..++|+|++++ +++.||.|++||+..++....... |...+..+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~ 360 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKF 360 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEE
T ss_pred ccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEE
Confidence 42 23444667777766 778999999999998876555544 3344443344
No 77
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.7e-41 Score=282.91 Aligned_cols=244 Identities=12% Similarity=0.174 Sum_probs=203.4
Q ss_pred CCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc--eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC
Q 019847 57 EDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS--KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN 134 (335)
Q Consensus 57 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 134 (335)
+..+|++++|+|++++|++|+.||.|++||+.++ +.+..+.+|...|.+++|+| ++++|++++.|+.|++||+.++.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC------
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCC
Confidence 5678999999999999999999999999999988 78888999999999999999 89999999999999999998765
Q ss_pred --eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccC-CCCCeeEEEecCCCCcEEEEecCC
Q 019847 135 --NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTD-HCGGVKALAWSPHQVNVLATGGGR 211 (335)
Q Consensus 135 --~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~g~ 211 (335)
.....+..|...|.+++|+|++++|++++.|+.|++||++..........+.. |...|.+++|+|++. ++++++
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~-- 165 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV-LLAAGC-- 165 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-EEEEEE--
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-EEEEEe--
Confidence 23455678999999999999999999999999999999987654344666666 999999999999986 555554
Q ss_pred CCCeEEEEECC------------------CCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 212 EDGCIKIWNVQ------------------KGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 212 ~d~~i~i~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
.|+.|++||++ .++++..+.+...+.+++|+|++++++++ +.|+.|++||+.+++.
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~------~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA------GHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE------ETTTEEC-CEECSTTS
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE------eCCCcEEEEECCCCCC
Confidence 79999999985 34455555556789999999999999887 7799999999999987
Q ss_pred ----eecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 274 ----VGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 274 ----~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
+..+..|...|.+++|+|++++|++++.|+.+ +|+..
T Consensus 240 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 240 PPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred cceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 88889999999999999999999998866655 77665
No 78
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.1e-40 Score=269.71 Aligned_cols=250 Identities=21% Similarity=0.375 Sum_probs=203.7
Q ss_pred CCcccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC--CCCEEEEEECCCcEEEEeC
Q 019847 12 YLMEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH--DAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 12 ~~~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~ 87 (335)
...+...+.+++|+++ .+++++.|+.|++||+++++......+.+|...|.+++|+| ++++|++|+.|++|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 3446678899999873 57778899999999999887655667889999999999986 4899999999999999999
Q ss_pred CCc--eeEeeecccccceeEeeecCCC-CCEEEEeeCCCcEEEEecccCCe--eeEEeecCCCCEEEEEeecC-------
Q 019847 88 ETS--KLVRNLEGHHRRVATSSWNHWN-GHILTSGSKDKSIINHDVRVSNN--VTSCIKAHSGEVCGLKWSNE------- 155 (335)
Q Consensus 88 ~~~--~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~~~~------- 155 (335)
+++ +....+.+|...|.+++|+|.. +.+|++|+.|+.|++||++.... ....+.+|...+.+++|+|+
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 168 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLI 168 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC----
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccc
Confidence 887 3566788899999999999932 78999999999999999986532 23455679999999999997
Q ss_pred ----------CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCC---CcEEEEecCCCCCeEEEEECC
Q 019847 156 ----------GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQ---VNVLATGGGREDGCIKIWNVQ 222 (335)
Q Consensus 156 ----------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~~g~~d~~i~i~d~~ 222 (335)
+++|++|+.|+.|++||++.......+..+.+|...|.+++|+|++ ..++++++ .|++|++||++
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s--~D~~v~iw~~~ 246 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCS--QDGRVFIWTCD 246 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEE--TTCEEEEEECS
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEc--CCCeEEEEEcc
Confidence 4789999999999999987543334667788999999999999986 25677776 89999999997
Q ss_pred CCc----eEEEe-ecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECC
Q 019847 223 KGT----CIHGI-DAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYP 269 (335)
Q Consensus 223 ~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~ 269 (335)
+.. ....+ .+...+.+++|+|+++.++++ +.|+.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~------~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVS------GGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE------ESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE------cCCCeEEEEEEC
Confidence 631 11122 346789999999999999887 679999999965
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-39 Score=299.64 Aligned_cols=269 Identities=16% Similarity=0.251 Sum_probs=236.4
Q ss_pred EEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEec
Q 019847 51 LLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 51 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~ 130 (335)
...+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|..+|.+++|+| ++++|++++.||.|++||+
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEET
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEEC
Confidence 345668999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC
Q 019847 131 RVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG 210 (335)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g 210 (335)
.+++. ...+.+|...|++++|+|++++|++++.||.|++||++.. ......+.+|..+|.+++|+|++..++++++
T Consensus 85 ~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~- 160 (814)
T 3mkq_A 85 NTGEK-VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN--WALEQTFEGHEHFVMCVAFNPKDPSTFASGC- 160 (814)
T ss_dssp TTCCE-EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT--SEEEEEEECCSSCEEEEEEETTEEEEEEEEE-
T ss_pred CCCcE-EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC--ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe-
Confidence 87665 5567889999999999999999999999999999998764 2445667789999999999994335666665
Q ss_pred CCCCeEEEEECCCCceEEEeecC--CcEeEEEeCC--CCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeE
Q 019847 211 REDGCIKIWNVQKGTCIHGIDAK--AQICGLEWNR--HHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILD 286 (335)
Q Consensus 211 ~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 286 (335)
.||.|++||+++++....+..+ ..+..++|+| ++..++++ +.|+.|++||+.+++.+..+.+|...|++
T Consensus 161 -~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~------~~dg~i~~~d~~~~~~~~~~~~~~~~v~~ 233 (814)
T 3mkq_A 161 -LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA------SDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (814)
T ss_dssp -TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEE------CTTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred -CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEE------eCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 8999999999988877776543 6899999999 89888887 77999999999999999999999999999
Q ss_pred eEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCcccccccccccee
Q 019847 287 LSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKT 331 (335)
Q Consensus 287 ~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~ 331 (335)
++|+|++++|++++.||.|++||+...+.......+...+.++.+
T Consensus 234 ~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~ 278 (814)
T 3mkq_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIAT 278 (814)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEE
Confidence 999999999999999999999999987766555556555655544
No 80
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-39 Score=301.00 Aligned_cols=288 Identities=8% Similarity=0.107 Sum_probs=214.0
Q ss_pred ccccceeeeecCCc-eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE
Q 019847 15 EDYYSKVIDWGRNN-VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV 93 (335)
Q Consensus 15 ~~~~~~~~~~~~~~-~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 93 (335)
+...+.+++|+++. +++++.|+.|++||+++++....+. |...|++++|+|++++|++|+.||.|++||+++++..
T Consensus 57 ~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 57 DRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVF---VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp SCCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEE---CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 35578999999876 7778899999999999988765553 6678999999999999999999999999999988764
Q ss_pred -----------eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecC------------------C
Q 019847 94 -----------RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAH------------------S 144 (335)
Q Consensus 94 -----------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------------------~ 144 (335)
..+.+|...|.+++|+|.++..+++|+.||.| +||+++.+. ...+..| .
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI-KQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE-EEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce-EEEEecccCCcCCCcccccccccccC
Confidence 23467889999999999556899999999999 999986654 4444444 5
Q ss_pred CCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeec---c-------------CCCCCeeEEEec----CCCCcE
Q 019847 145 GEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRF---T-------------DHCGGVKALAWS----PHQVNV 204 (335)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~-------------~~~~~v~~~~~~----~~~~~~ 204 (335)
..|.+++|+|++++|++++.||.|++||+++++.... +.+ . .|..+|.+++|+ |++..+
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~-r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA-RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE-ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE-EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 7899999999999999999999999999887432111 111 1 134578899994 444456
Q ss_pred EEEecCC-------------------------------------------------------------------------
Q 019847 205 LATGGGR------------------------------------------------------------------------- 211 (335)
Q Consensus 205 ~~~~~g~------------------------------------------------------------------------- 211 (335)
+++++..
T Consensus 291 l~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~ 370 (902)
T 2oaj_A 291 LISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLI 370 (902)
T ss_dssp EEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEE
T ss_pred EEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEE
Confidence 6655300
Q ss_pred -CCCeEEEEECCCCceEEE-------ee-cCCcEe----------------------------------EEEeCCCCcee
Q 019847 212 -EDGCIKIWNVQKGTCIHG-------ID-AKAQIC----------------------------------GLEWNRHHKEI 248 (335)
Q Consensus 212 -~d~~i~i~d~~~~~~~~~-------~~-~~~~~~----------------------------------~~~~~~~~~~~ 248 (335)
.|+.|++||+.++..... +. ++..+. .++|+|+++.+
T Consensus 371 s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~l 450 (902)
T 2oaj_A 371 LGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAF 450 (902)
T ss_dssp ETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEE
T ss_pred cCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEE
Confidence 123444555444322111 00 011222 23445666666
Q ss_pred eeeeeeeeecCCCeEEEEECCCCceee--cc---------cCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 249 LSGHGFSASGDGNKLCLWKYPNMTKVG--EL---------QSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 249 ~~~~~~~~~~~~~~i~i~d~~~~~~~~--~~---------~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
+++ +.|++|++||+.++.... .+ .+|...|++++|+||+++||+|+.||+|++|++.+++
T Consensus 451 aSg------s~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~ 521 (902)
T 2oaj_A 451 ITG------HSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQ 521 (902)
T ss_dssp EEE------ETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECC
T ss_pred EEe------cCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCcc
Confidence 665 789999999998875321 11 1788899999999999999999999999999998763
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.7e-38 Score=271.00 Aligned_cols=274 Identities=20% Similarity=0.360 Sum_probs=239.5
Q ss_pred ccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe
Q 019847 15 EDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 94 (335)
+...+.+++|+++.+++++.|+.|++||+++++.. ..+.+|...|.+++|+ ++++++|+.||.|++||+.+++.+.
T Consensus 158 h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~ 233 (445)
T 2ovr_B 158 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECI--HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLH 233 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEE
T ss_pred CCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEE--EEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEE
Confidence 45678899999889999999999999999998764 4566899999999995 5689999999999999999999999
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
.+..|...+.++.| +++.+++|+.||.|++||+++.. ....+.+|...|.+++| +++++++++.||.|++||++
T Consensus 234 ~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 234 VLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp EEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTE-EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT
T ss_pred EEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCc-EeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC
Confidence 99999999999999 67899999999999999998665 46667889999999999 78899999999999999987
Q ss_pred CCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee----cCCcEeEEEeCCCCceeee
Q 019847 175 KMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID----AKAQICGLEWNRHHKEILS 250 (335)
Q Consensus 175 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 250 (335)
++ +.+..+.+|...+.++.+++ . ++++++ .||.|++||+++++.+..+. +...+.+++|+ +.++++
T Consensus 308 ~~---~~~~~~~~~~~~v~~~~~~~--~-~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s 377 (445)
T 2ovr_B 308 TG---NCIHTLTGHQSLTSGMELKD--N-ILVSGN--ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVIT 377 (445)
T ss_dssp TC---CEEEEECCCCSCEEEEEEET--T-EEEEEE--TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEE
T ss_pred CC---CEEEEEcCCcccEEEEEEeC--C-EEEEEe--CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEE
Confidence 64 45777788999999988854 3 556655 89999999999999998887 45679999996 467776
Q ss_pred eeeeeeecCCCeEEEEECCCCceeecc-----cCCCCceeEeEEcCCCCEEEEEeCCCc----EEEEecCCCC
Q 019847 251 GHGFSASGDGNKLCLWKYPNMTKVGEL-----QSSNSRILDLSQSPDGLTVATAGADET----IRFWEAFGPS 314 (335)
Q Consensus 251 ~~~~~~~~~~~~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~dg~----v~iw~~~~~~ 314 (335)
+ +.||.|++||+.+++.+..+ ..|.+.|.+++|+|++.++++|+.||. |.+||+....
T Consensus 378 ~------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 378 S------SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp E------ETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCCC
T ss_pred E------eCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCCC
Confidence 6 78999999999999998877 468889999999999999999999998 9999998753
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-39 Score=271.42 Aligned_cols=249 Identities=22% Similarity=0.347 Sum_probs=212.3
Q ss_pred eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCC--CceeEeeecccccceeEeeecCCC--CCEEEEeeCCCcEEEE
Q 019847 53 QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE--TSKLVRNLEGHHRRVATSSWNHWN--GHILTSGSKDKSIINH 128 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~~~ 128 (335)
.+.+|...|++++|+|++++|++|+.||.|++||+. +++.+..+..|...|++++|++ + +++|++++.||.|++|
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSCEEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCC-CCCCCEEEEeccCCEEEEE
Confidence 456899999999999999999999999999999998 6677888999999999999987 4 8999999999999999
Q ss_pred ecccCCe-eeEEeecCCCCEEEEEeecC--CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecC------
Q 019847 129 DVRVSNN-VTSCIKAHSGEVCGLKWSNE--GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSP------ 199 (335)
Q Consensus 129 d~~~~~~-~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 199 (335)
|++++.. ....+..|...|.+++|+|+ +++|++++.||.|++||++.... .....+..|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASWAPATIEED 163 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-CCEEEEECCTTCEEEEEECCCC----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-eeeEEecCCCCceEEEEEcCcccccc
Confidence 9987652 45667779999999999998 99999999999999999987543 23445667999999999999
Q ss_pred -------CCCcEEEEecCCCCCeEEEEECCCCce----EEEee-cCCcEeEEEeCCC---CceeeeeeeeeeecCCCeEE
Q 019847 200 -------HQVNVLATGGGREDGCIKIWNVQKGTC----IHGID-AKAQICGLEWNRH---HKEILSGHGFSASGDGNKLC 264 (335)
Q Consensus 200 -------~~~~~~~~~~g~~d~~i~i~d~~~~~~----~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~ 264 (335)
++. ++++++ .|+.|++||+++++. ...+. +...+.+++|+|+ +.+++++ +.|+.|+
T Consensus 164 ~~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~------~~dg~i~ 234 (379)
T 3jrp_A 164 GEHNGTKESR-KFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV------SQDRTCI 234 (379)
T ss_dssp ------CTTC-EEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE------ETTSCEE
T ss_pred ccccCCCCCC-EEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE------eCCCEEE
Confidence 454 555655 899999999987653 33444 3568999999999 8888877 7799999
Q ss_pred EEECCCCc-----eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 265 LWKYPNMT-----KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 265 i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
+||+.+++ .+.....|...|++++|+|++++|++++.||.|++|++..
T Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 235 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 99998864 3333445888999999999999999999999999999984
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-38 Score=263.43 Aligned_cols=282 Identities=19% Similarity=0.290 Sum_probs=226.5
Q ss_pred eEEEEEecCCceeeEEeecCCCCCceEEEEcCC-CCEEEEEECCCcEEEEeCCCce-----eEeeecccccceeEeeecC
Q 019847 37 VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHD-AKTLAVGYMDSKLQLWDAETSK-----LVRNLEGHHRRVATSSWNH 110 (335)
Q Consensus 37 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~ 110 (335)
.++++...+.+.....++.+|.+.|++++|+|+ +++|++|+.||+|+|||+.+.+ +...+.+|...|.+++|+|
T Consensus 17 ~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~ 96 (340)
T 4aow_A 17 NLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS 96 (340)
T ss_dssp ---------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT
T ss_pred cEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC
Confidence 455666666665556678999999999999997 6899999999999999987643 5667889999999999999
Q ss_pred CCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCC
Q 019847 111 WNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCG 190 (335)
Q Consensus 111 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 190 (335)
++++|++++.|+.|++|+...... ......+...+....+++++++|++++.|+.+++||+... ........+|..
T Consensus 97 -dg~~l~s~~~d~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~--~~~~~~~~~~~~ 172 (340)
T 4aow_A 97 -DGQFALSGSWDGTLRLWDLTTGTT-TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGV--CKYTVQDESHSE 172 (340)
T ss_dssp -TSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC--EEEEECSSSCSS
T ss_pred -CCCEEEEEcccccceEEeecccce-eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCC--ceEEEEeccccC
Confidence 999999999999999999985544 5556678889999999999999999999999999998753 233455667899
Q ss_pred CeeEEEecCCCCc-EEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEEC
Q 019847 191 GVKALAWSPHQVN-VLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKY 268 (335)
Q Consensus 191 ~v~~~~~~~~~~~-~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 268 (335)
.+..++|++++.. ++++++ .|+.|++||+++++.+..+.. ..++.+++|+|++++++++ +.|+.|++||+
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~--~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~------s~Dg~i~iwd~ 244 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCG--WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG------GKDGQAMLWDL 244 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE------ETTCEEEEEET
T ss_pred cccceEEccCCCCcEEEEEc--CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEE------eCCCeEEEEEe
Confidence 9999999988654 556665 899999999999999888875 5689999999999999887 77999999999
Q ss_pred CCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCC---------CCccccccccccceec
Q 019847 269 PNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGD---------EDSVSHLAGLVSLKTS 332 (335)
Q Consensus 269 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~---------~~~~~~~~~i~~~~~~ 332 (335)
++.+++..+..+ ..|.+++|+|++. +++++.|+.|++||+...... .....|...|.++.++
T Consensus 245 ~~~~~~~~~~~~-~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 315 (340)
T 4aow_A 245 NEGKHLYTLDGG-DIINALCFSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWS 315 (340)
T ss_dssp TTTEEEEEEECS-SCEEEEEECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEEC
T ss_pred ccCceeeeecCC-ceEEeeecCCCCc-eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEEC
Confidence 999998888765 4699999999886 456667999999999865322 1233567777777664
No 84
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.1e-38 Score=306.15 Aligned_cols=305 Identities=18% Similarity=0.294 Sum_probs=260.0
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC--CCCEEEEEECCCcEEEEeCCCc
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH--DAKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~ 90 (335)
+...+.+++|+++ .+++++.|+.|++||+.+++... .+.+|...|.+++|+| ++.++++|+.||.|++||+.++
T Consensus 656 h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~ 733 (1249)
T 3sfz_A 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH--TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK 733 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSS
T ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE--EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCc
Confidence 4567889999884 57777889999999999998644 4568999999999999 5568999999999999999999
Q ss_pred eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe-----------------------------------
Q 019847 91 KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN----------------------------------- 135 (335)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----------------------------------- 135 (335)
+.+..+.+|...|.+++|+| +++.|++++.||.|++||+.++..
T Consensus 734 ~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 734 ECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp SEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred chhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 99999999999999999999 999999999999999999864321
Q ss_pred -------------------------------------------------------------eeEEeecCCCCEEEEEeec
Q 019847 136 -------------------------------------------------------------VTSCIKAHSGEVCGLKWSN 154 (335)
Q Consensus 136 -------------------------------------------------------------~~~~~~~~~~~i~~~~~~~ 154 (335)
....+.+|...|.+++|+|
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 1122346778899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCC----------------------------------------------------------
Q 019847 155 EGNLLASGGDDNVVRIWERSKM---------------------------------------------------------- 176 (335)
Q Consensus 155 ~~~~l~~~~~dg~i~iwd~~~~---------------------------------------------------------- 176 (335)
++++|++++.||.|++||+...
T Consensus 893 dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 893 DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 9999999999999999996421
Q ss_pred ------------------CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeE
Q 019847 177 ------------------SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICG 238 (335)
Q Consensus 177 ------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 238 (335)
........+.+|...|.+++|+|+++.+++.+ .|+.|++||+.+++......+...+.+
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~---~dg~i~vwd~~~~~~~~~~~~~~~v~~ 1049 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS---EDSVIQVWNWQTGDYVFLQAHQETVKD 1049 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC---SSSBEEEEETTTTEEECCBCCSSCEEE
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc---CCCEEEEEECCCCceEEEecCCCcEEE
Confidence 01122344567889999999999997665544 799999999999998877777889999
Q ss_pred EEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCC
Q 019847 239 LEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDED 318 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~ 318 (335)
+.|+|++..+ ++ +.|+.|++||+.+++....+.+|...|++++|+|++++|++++.||.|++||+..++....
T Consensus 1050 ~~~~~~~~l~-~~------~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~ 1122 (1249)
T 3sfz_A 1050 FRLLQDSRLL-SW------SFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHE 1122 (1249)
T ss_dssp EEECSSSEEE-EE------ESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBC
T ss_pred EEEcCCCcEE-EE------ECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeee
Confidence 9999977644 33 5699999999999999999999999999999999999999999999999999999988888
Q ss_pred ccccccccccceec
Q 019847 319 SVSHLAGLVSLKTS 332 (335)
Q Consensus 319 ~~~~~~~i~~~~~~ 332 (335)
..+|...|.++.++
T Consensus 1123 l~~h~~~v~~~~~s 1136 (1249)
T 3sfz_A 1123 LKGHNGCVRCSAFS 1136 (1249)
T ss_dssp CCCCSSCEEEEEEC
T ss_pred eccCCCcEEEEEEC
Confidence 88999999888775
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-39 Score=262.71 Aligned_cols=262 Identities=17% Similarity=0.255 Sum_probs=226.2
Q ss_pred eEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEe
Q 019847 50 KLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHD 129 (335)
Q Consensus 50 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d 129 (335)
....+.+|...|++++| |++++|++|+.||.|++||+.+++....+..|...|.+++|+| ++++|++++.||.+++|+
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEE
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEE
Confidence 35567899999999999 9999999999999999999999999999999999999999999 999999999999999999
Q ss_pred cccCC--eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEE
Q 019847 130 VRVSN--NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLAT 207 (335)
Q Consensus 130 ~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 207 (335)
+.... .....+..|...|.+++| +++++++++.||.|++|| .......+..|..++.++.|.|....++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-----EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-----TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-----CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 87643 345567889999999999 567999999999999999 234566777899999999999833345666
Q ss_pred ecCCCCCeEEEEECCCCceEEEee--cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCcee
Q 019847 208 GGGREDGCIKIWNVQKGTCIHGID--AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRIL 285 (335)
Q Consensus 208 ~~g~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~ 285 (335)
++ .|+.|++|| ..+....+. +...+.+++|+|++. ++++ +.++.|++||+++++.+..+..|...|+
T Consensus 161 ~~--~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~------~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 161 AS--ADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISC------SNDGLIKLVDMHTGDVLRTYEGHESFVY 229 (313)
T ss_dssp EE--TTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEE------ETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EE--CCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEc------cCCCeEEEEECCchhhhhhhhcCCceEE
Confidence 55 899999999 445555554 567899999999998 6665 6799999999999999999999999999
Q ss_pred EeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 286 DLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 286 ~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
+++|+|++ .|++++.||.|++||+..++.......|...|.++.++
T Consensus 230 ~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~ 275 (313)
T 3odt_A 230 CIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCM 275 (313)
T ss_dssp EEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEEC
T ss_pred EEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEc
Confidence 99999999 68999999999999999988777777777778777664
No 86
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-39 Score=274.83 Aligned_cols=264 Identities=18% Similarity=0.298 Sum_probs=213.1
Q ss_pred CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCC-EEEEEECCCcEEEEeC----CCce------eEeeecc------
Q 019847 36 PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAK-TLAVGYMDSKLQLWDA----ETSK------LVRNLEG------ 98 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~----~~~~------~~~~~~~------ 98 (335)
..+.+|+++... ..+....|...|++++|+|+++ +|++|+.||.|++|++ .+++ ....+..
T Consensus 25 ~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (425)
T 1r5m_A 25 SIDSSDDLDGFV--KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSA 102 (425)
T ss_dssp ---------CCC--EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC-
T ss_pred cccccccchhhh--hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccc
Confidence 345678776544 3344446778999999999999 9999999999999999 8887 4544443
Q ss_pred ----cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 99 ----HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 99 ----~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
|...|.+++|+| ++++|++++.||.|++||. .......+..|...|.+++|+|++++|++++.||.|++||++
T Consensus 103 ~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 179 (425)
T 1r5m_A 103 SSGKTTNQVTCLAWSH-DGNSIVTGVENGELRLWNK--TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVI 179 (425)
T ss_dssp -----CBCEEEEEECT-TSSEEEEEETTSCEEEEET--TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred cccCCCCceEEEEEcC-CCCEEEEEeCCCeEEEEeC--CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECC
Confidence 677999999999 9999999999999999993 334466678899999999999999999999999999999986
Q ss_pred CCCcc-----------------------------------------------------cceeeccCCCCCeeEEEecCCC
Q 019847 175 KMSSS-----------------------------------------------------KSLHRFTDHCGGVKALAWSPHQ 201 (335)
Q Consensus 175 ~~~~~-----------------------------------------------------~~~~~~~~~~~~v~~~~~~~~~ 201 (335)
+.... ..+..+..|...|.+++|+|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTN 259 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTT
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCC
Confidence 54211 1123445688899999999999
Q ss_pred CcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC
Q 019847 202 VNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS 280 (335)
Q Consensus 202 ~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 280 (335)
..++ +++ .|+.|++||+++++.+..+. +...+.+++|+|++ .++++ +.|+.|++||+.+++.+..+..|
T Consensus 260 ~~l~-~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~------~~d~~i~i~d~~~~~~~~~~~~~ 329 (425)
T 1r5m_A 260 KLLL-SAS--DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISC------SMDGSVRLWSLKQNTLLALSIVD 329 (425)
T ss_dssp TEEE-EEE--TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEE------ETTSEEEEEETTTTEEEEEEECT
T ss_pred CEEE-EEc--CCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEE------eCCCcEEEEECCCCcEeEecccC
Confidence 7554 444 79999999999998888886 46689999999999 66666 67999999999999999999999
Q ss_pred CCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 281 NSRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 281 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
...|.+++|+|++++|++++.||.|++|++....
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 9999999999999999999999999999998766
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=278.32 Aligned_cols=247 Identities=13% Similarity=0.252 Sum_probs=207.0
Q ss_pred CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce-----------eEeeecccc------------cceeEeeecCCC
Q 019847 56 GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK-----------LVRNLEGHH------------RRVATSSWNHWN 112 (335)
Q Consensus 56 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 112 (335)
.+.+.|++++|+|++++||+|+.||.|++||+.+++ ....+.+|. ..|.+++|+| +
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~-~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP-Q 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC-C
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC-C
Confidence 357899999999999999999999999999999876 577888898 8899999999 6
Q ss_pred C--CEEEEeeCCCcEEEEecccCCee---------------------------------------eEEeecCCCCEEEEE
Q 019847 113 G--HILTSGSKDKSIINHDVRVSNNV---------------------------------------TSCIKAHSGEVCGLK 151 (335)
Q Consensus 113 ~--~~l~~~~~dg~i~~~d~~~~~~~---------------------------------------~~~~~~~~~~i~~~~ 151 (335)
+ ..|++++.|+.|++||+...... .....+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 6 79999999999999999753321 122357999999999
Q ss_pred eecCCCEEEEEeCCCeEEEEEccCCCccccee-------eccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC
Q 019847 152 WSNEGNLLASGGDDNVVRIWERSKMSSSKSLH-------RFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG 224 (335)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~ 224 (335)
|+|++++|++| .|+.|++||++... ..+. .+.+|...|.+++|+|++..++++++ .||.|++||++++
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEITD--RSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS--SKGTIRLCDMRAS 259 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTEEE--EEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE--TTSCEEEEETTTC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCCCC--ceeeeeecccccccccCcceEEEEECCCCCcEEEEEe--CCCeEEEEECcCC
Confidence 99999999998 79999999987422 2222 36689999999999999856777776 8999999999998
Q ss_pred ce----EEEeecCC-------------cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC-CceeecccCCCCc---
Q 019847 225 TC----IHGIDAKA-------------QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN-MTKVGELQSSNSR--- 283 (335)
Q Consensus 225 ~~----~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~~~~~~~~~--- 283 (335)
+. +..+..+. .+.+++|+|++++++++ +. +.|++||+++ ++++..+..|...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~------~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR------DY-LSVKVWDLNMENRPVETYQVHEYLRSK 332 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEE------ES-SEEEEEETTCCSSCSCCEESCGGGTTT
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEe------eC-CeEEEEeCCCCccccceeecccccccc
Confidence 86 66676553 79999999999999877 55 9999999997 8888888888642
Q ss_pred ------------eeEeEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q 019847 284 ------------ILDLSQSPDGLTVATAGADETIRFWEAFGPSG 315 (335)
Q Consensus 284 ------------i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~ 315 (335)
+..++|+|++++|++|+.||.|++||+..++.
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 23489999999999999999999999987653
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=268.18 Aligned_cols=253 Identities=13% Similarity=0.256 Sum_probs=209.4
Q ss_pred eecCCCCCceEEEEcCCCCEEE-EEEC---CCcEEEEeCCCceeEeee-cccccceeEeeecCCC--CCEEEEeeCCCcE
Q 019847 53 QVPGEDDYPTSVSWSHDAKTLA-VGYM---DSKLQLWDAETSKLVRNL-EGHHRRVATSSWNHWN--GHILTSGSKDKSI 125 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~~~~l~-~~~~---dg~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i 125 (335)
.+.+|...|.+++|+|+++.++ +|+. ||.|++||+.+++..... ..|...|.+++|+|.. +.+|++++.||.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 3457999999999999996655 5555 899999999988765443 3688999999999932 7999999999999
Q ss_pred EEEecccCCeeeEEeecCCCCEEEEE------eecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCC----CCeeEE
Q 019847 126 INHDVRVSNNVTSCIKAHSGEVCGLK------WSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHC----GGVKAL 195 (335)
Q Consensus 126 ~~~d~~~~~~~~~~~~~~~~~i~~~~------~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~v~~~ 195 (335)
++||+.+.......+.+|...|.+++ |+|++++|++++.||.|++||++.... .+..+..|. ..+.++
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD--PVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--CSEEECCCTTSCCCCEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--cceeccccCCCCCCceEEE
Confidence 99999977746777889999999995 467899999999999999999987541 344444333 378888
Q ss_pred E----ecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCC---CCceeeeeeeeeeecCCCeEEEEEC
Q 019847 196 A----WSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNR---HHKEILSGHGFSASGDGNKLCLWKY 268 (335)
Q Consensus 196 ~----~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~i~d~ 268 (335)
+ |+|++.. +++++ .|+.|++||+++++......+...+.+++|+| ++..++++ +.|+.|++||+
T Consensus 171 ~~~~~~~~~~~~-l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~------~~dg~i~i~d~ 241 (357)
T 3i2n_A 171 AFGNAYNQEERV-VCAGY--DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVAT------SLEGKFHVFDM 241 (357)
T ss_dssp EEECCCC-CCCE-EEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEE------ESTTEEEEEEE
T ss_pred EEEeccCCCCCE-EEEEc--cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEE------CCCCeEEEEeC
Confidence 8 7788864 45544 79999999999999888878888999999999 89988887 67999999999
Q ss_pred CCCceeeccc-----CCCCceeEeEEcCCCC-EEEEEeCCCcEEEEecCCCCCC
Q 019847 269 PNMTKVGELQ-----SSNSRILDLSQSPDGL-TVATAGADETIRFWEAFGPSGD 316 (335)
Q Consensus 269 ~~~~~~~~~~-----~~~~~i~~~~~~~~~~-~l~~~~~dg~v~iw~~~~~~~~ 316 (335)
++++....+. .|...|++++|+|+++ +|++++.||.|++||+..+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 8877766555 8999999999999998 8999999999999999876433
No 89
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-38 Score=287.03 Aligned_cols=252 Identities=19% Similarity=0.294 Sum_probs=214.9
Q ss_pred EeecCCCCCceEEEEcCCC-CEEEEEECCCcEEEEeCCCc-----eeEeeecccccceeEeeecCCCCCEEEEeeCCCcE
Q 019847 52 LQVPGEDDYPTSVSWSHDA-KTLAVGYMDSKLQLWDAETS-----KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSI 125 (335)
Q Consensus 52 ~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 125 (335)
..+.+|.+.|++++|+|++ ++|++|+.||+|++|++.+. .....+.+|...|.+++|+| ++++|++|+.||.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcE
Confidence 3567999999999999864 79999999999999999753 34567889999999999999 99999999999999
Q ss_pred EEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCC-cE
Q 019847 126 INHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQV-NV 204 (335)
Q Consensus 126 ~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~ 204 (335)
++||+.++.. ...+.+|...|.+++|+|++++|++++.|++|++||+.............+|...|.+++|+|++. .+
T Consensus 455 ~vwd~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 455 RLWDLAAGVS-TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEETTTTEE-EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEECCCCcc-eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 9999986554 566789999999999999999999999999999999764322222223357888999999999873 46
Q ss_pred EEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCc
Q 019847 205 LATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSR 283 (335)
Q Consensus 205 ~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 283 (335)
+++++ .|+.|++||+++++....+.. ...+.+++|+|++++++++ +.|+.|++||+.+++.+..+..+ ..
T Consensus 534 l~s~s--~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg------~~Dg~i~iwd~~~~~~~~~~~~~-~~ 604 (694)
T 3dm0_A 534 IVSAS--WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG------GKDGVVLLWDLAEGKKLYSLEAN-SV 604 (694)
T ss_dssp EEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE------ETTSBCEEEETTTTEEEECCBCS-SC
T ss_pred EEEEe--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE------eCCCeEEEEECCCCceEEEecCC-Cc
Confidence 66666 899999999999998888875 4689999999999999988 77999999999999998887654 56
Q ss_pred eeEeEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q 019847 284 ILDLSQSPDGLTVATAGADETIRFWEAFGPSG 315 (335)
Q Consensus 284 i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~ 315 (335)
|.+++|+|++.+|++++ |+.|++||+.....
T Consensus 605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT-EHGIKIWDLESKSI 635 (694)
T ss_dssp EEEEEECSSSSEEEEEE-TTEEEEEETTTTEE
T ss_pred EEEEEEcCCCcEEEEEc-CCCEEEEECCCCCC
Confidence 99999999998887765 56699999987653
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-38 Score=290.16 Aligned_cols=305 Identities=10% Similarity=0.096 Sum_probs=231.6
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+...+.+++|+++ .+++++.|+.|++|+..+.+... . ..|...|.+++|+| +++|++++.|+.|++||+++++.
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~--~-~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI--K-LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV 91 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE--E-CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE
T ss_pred CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE--E-cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE
Confidence 3556889999984 46667789999999988766432 2 34788999999999 88999999999999999999998
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeee----------EEeecCCCCEEEEEeecC-CCEEEE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVT----------SCIKAHSGEVCGLKWSNE-GNLLAS 161 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~----------~~~~~~~~~i~~~~~~~~-~~~l~~ 161 (335)
+..+. |...|++++|+| ++++|++|+.||.|++||+++..... ....+|.+.|.+++|+|+ +..+++
T Consensus 92 ~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 88886 778999999999 99999999999999999998655321 223578999999999995 578999
Q ss_pred EeCCCeEEEEEccCCCcccceeeccCC------------------CCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC
Q 019847 162 GGDDNVVRIWERSKMSSSKSLHRFTDH------------------CGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK 223 (335)
Q Consensus 162 ~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~ 223 (335)
|+.||.| +||++... .+..+..| ...|.+++|+|++. ++++++ .|+.|++||+++
T Consensus 170 g~~dg~v-lWd~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs--~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENE---IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIH--EDNSLVFWDANS 242 (902)
T ss_dssp ECSSCEE-EEETTTTE---EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEE--TTCCEEEEETTT
T ss_pred EeCCCcE-EEECCCCc---eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEE--CCCeEEEEECCC
Confidence 9999999 99988743 34444333 57799999999986 555555 899999999999
Q ss_pred CceEEE--ee-----------------cCCcEeEEEeC----CCC-ceeeeee---------------------------
Q 019847 224 GTCIHG--ID-----------------AKAQICGLEWN----RHH-KEILSGH--------------------------- 252 (335)
Q Consensus 224 ~~~~~~--~~-----------------~~~~~~~~~~~----~~~-~~~~~~~--------------------------- 252 (335)
++++.. +. +...|.+++|+ |++ ..+++|.
T Consensus 243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 322 (902)
T 2oaj_A 243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYE 322 (902)
T ss_dssp CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHH
T ss_pred CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchh
Confidence 987653 21 12368899995 443 3333330
Q ss_pred -------------------------------------------eeeeecCCCeEEEEECCCCceeec-------------
Q 019847 253 -------------------------------------------GFSASGDGNKLCLWKYPNMTKVGE------------- 276 (335)
Q Consensus 253 -------------------------------------------~~~~~~~~~~i~i~d~~~~~~~~~------------- 276 (335)
.+++.+.|+.|++||+.++.....
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~ 402 (902)
T 2oaj_A 323 GMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRP 402 (902)
T ss_dssp HHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTT
T ss_pred hhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCC
Confidence 012234468899999877643321
Q ss_pred ----------------------------ccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCc---------
Q 019847 277 ----------------------------LQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDS--------- 319 (335)
Q Consensus 277 ----------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~--------- 319 (335)
+.+|...+.+++|+|++++|++|+.||+|++||+..+......
T Consensus 403 ~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~ 482 (902)
T 2oaj_A 403 LATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRT 482 (902)
T ss_dssp BEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHH
T ss_pred CeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhh
Confidence 2334445556677899999999999999999999987432211
Q ss_pred --cccccccccceec
Q 019847 320 --VSHLAGLVSLKTS 332 (335)
Q Consensus 320 --~~~~~~i~~~~~~ 332 (335)
.+|...|.++.|+
T Consensus 483 ~~~~h~~~V~svafs 497 (902)
T 2oaj_A 483 LNKAKELAVDKISFA 497 (902)
T ss_dssp TTCSSSCCEEEEEEE
T ss_pred cCCCCCCceeEEEec
Confidence 1567778888775
No 91
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=263.50 Aligned_cols=288 Identities=15% Similarity=0.182 Sum_probs=229.8
Q ss_pred cccccceeeeecCC-----ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCC
Q 019847 14 MEDYYSKVIDWGRN-----NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE 88 (335)
Q Consensus 14 ~~~~~~~~~~~~~~-----~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~ 88 (335)
.+...+.+++|+++ .+++++.|+.|++||+++........+.+|...|.+++|+|++++|++++.||.|++||++
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 45678999999985 3666678999999999984333335566899999999999999999999999999999999
Q ss_pred CceeEeeecccccceeEeee--cCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCC
Q 019847 89 TSKLVRNLEGHHRRVATSSW--NHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 89 ~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
+++.+. +..|...|.+++| +| ++.+|++++.||.|++||+++.+. ...+..+ ..+.++.+.+ ..+++++.++
T Consensus 117 ~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~-~~~~~~~~~~--~~~~~~~~~~ 190 (368)
T 3mmy_A 117 SNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNP-MMVLQLP-ERCYCADVIY--PMAVVATAER 190 (368)
T ss_dssp TTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSC-SEEEECS-SCEEEEEEET--TEEEEEEGGG
T ss_pred CCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcE-EEEEecC-CCceEEEecC--CeeEEEeCCC
Confidence 998776 5569999999999 77 889999999999999999997665 4444444 4666666664 4888899999
Q ss_pred eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCc---EEEEecCCCCCeEEEEECCCC---ceEEEeecCC------
Q 019847 167 VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVN---VLATGGGREDGCIKIWNVQKG---TCIHGIDAKA------ 234 (335)
Q Consensus 167 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~~~~g~~d~~i~i~d~~~~---~~~~~~~~~~------ 234 (335)
.+++|+++..... .......+...+.++.+.++... .+++++ .|+.|++||++.. +.+..+..+.
T Consensus 191 ~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 191 GLIVYQLENQPSE-FRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp CEEEEECSSSCEE-EEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred cEEEEEeccccch-hhhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 9999998864321 11122233445666666555432 255555 8999999999987 4555665543
Q ss_pred -------cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEE
Q 019847 235 -------QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRF 307 (335)
Q Consensus 235 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~i 307 (335)
.+.+++|+|++++++++ +.||.|++||+.+++++..+..|...|++++|+|++++|++++.|+..+.
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~------~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATV------GSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEE------ETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred cccccccceEEEEEecCCCEEEEE------ccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 59999999999999888 77999999999999999999999999999999999999999999998777
Q ss_pred EecCCCCCC
Q 019847 308 WEAFGPSGD 316 (335)
Q Consensus 308 w~~~~~~~~ 316 (335)
|++...+..
T Consensus 342 ~~~~~~~~~ 350 (368)
T 3mmy_A 342 HEFYNPQKK 350 (368)
T ss_dssp GGGCCTTSC
T ss_pred ccccCCCcc
Confidence 776655443
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-38 Score=264.80 Aligned_cols=260 Identities=10% Similarity=0.116 Sum_probs=217.8
Q ss_pred cCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce---eEeeecccccceeEeeecCCCCC-EEEEeeCCCcEEEEec
Q 019847 55 PGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK---LVRNLEGHHRRVATSSWNHWNGH-ILTSGSKDKSIINHDV 130 (335)
Q Consensus 55 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~~~d~ 130 (335)
.+|...|++++|+|++++|++++.||.|++|++.+++ ....+..|...|.+++|+| +++ +|++|+.||.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEe
Confidence 5799999999999999999999999999999998876 3455567999999999999 899 9999999999999999
Q ss_pred -ccCCeeeEEeec--CCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCc------ccceeeccCCCCCeeEEEecCCC
Q 019847 131 -RVSNNVTSCIKA--HSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSS------SKSLHRFTDHCGGVKALAWSPHQ 201 (335)
Q Consensus 131 -~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~ 201 (335)
.+... ..+.. |...|.+++|+| +++|++++.|+.|++||++.... .+.+..+. |...+.+++|+|++
T Consensus 87 ~~~~~~--~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 87 IGSPSF--QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSSSE--EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE
T ss_pred ccCCce--EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc
Confidence 76543 55677 999999999999 99999999999999999875100 22233444 88899999999986
Q ss_pred CcEEEEecCCCCCeEEEEECCC-CceE---EEeecCCcEeEEEeCC-CCceeeeeeeeeeecCCCeEEEEECCCC-----
Q 019847 202 VNVLATGGGREDGCIKIWNVQK-GTCI---HGIDAKAQICGLEWNR-HHKEILSGHGFSASGDGNKLCLWKYPNM----- 271 (335)
Q Consensus 202 ~~~~~~~~g~~d~~i~i~d~~~-~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~d~~~~----- 271 (335)
+++++ .|+.|++||+++ +... ....+...+.+++|+| +++.++++ +.++.+++|+++..
T Consensus 163 ---l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~------~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 163 ---LIVGM--NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS------SIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp ---EEEEE--STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE------ETTSEEEEEECCTTCCSTT
T ss_pred ---EEEEe--CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE------ecCCcEEEEEEcCCCcccc
Confidence 44444 799999999998 5432 2233566899999999 99998887 67999999999887
Q ss_pred -ceeecccCCCC---------ceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCcccc-ccccccce
Q 019847 272 -TKVGELQSSNS---------RILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSH-LAGLVSLK 330 (335)
Q Consensus 272 -~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~-~~~i~~~~ 330 (335)
+....+..|.. .|++++|+|++++|++++.||.|++||+..++.......| ...|.++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec
Confidence 77777777755 8999999999999999999999999999988776666676 77666654
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-37 Score=266.57 Aligned_cols=284 Identities=12% Similarity=0.140 Sum_probs=229.4
Q ss_pred ccceeeeecCC-ceEEEecCCeEEEEEecCCc---eeeEEee--------------------------------------
Q 019847 17 YYSKVIDWGRN-NVLAVALGPVLFLWKWENGK---VKKLLQV-------------------------------------- 54 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~---~~~~~~~-------------------------------------- 54 (335)
.++.+++|+++ .+++++.++.|++||+.+++ .......
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 46778889874 58888889999999999988 3332221
Q ss_pred --------------cCCCCCceEEEEcCCCCEE-EEEECCCcEEEEeCC--CceeEeeec--ccccceeEeeecCCCCCE
Q 019847 55 --------------PGEDDYPTSVSWSHDAKTL-AVGYMDSKLQLWDAE--TSKLVRNLE--GHHRRVATSSWNHWNGHI 115 (335)
Q Consensus 55 --------------~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~ 115 (335)
++|...|.+++|+|++++| ++|+.||.|++||+. +++.+..+. .|...|.+++|+| ++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~ 163 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDTT 163 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSSE
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCCE
Confidence 1344579999999999996 888899999999999 888888876 5668999999999 9999
Q ss_pred EEEeeCCCcEEEEecccCCee---eEEeecCCCCEEEEEeecC---CCEEEEEeCCCeEEEEEccCCCcccceee-ccCC
Q 019847 116 LTSGSKDKSIINHDVRVSNNV---TSCIKAHSGEVCGLKWSNE---GNLLASGGDDNVVRIWERSKMSSSKSLHR-FTDH 188 (335)
Q Consensus 116 l~~~~~dg~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~ 188 (335)
|++++.+|.+++|++.+.... ...+.+|...|.+++|+|+ +++|++++.|+.|++||++... .+.. +.+|
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---~~~~~~~~h 240 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---IVDKWLFGH 240 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT---CEEEECCCC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc---eeeeeecCC
Confidence 999999999999999865532 2356789999999999999 9999999999999999987643 3444 5589
Q ss_pred CCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec--------------------------CCcEeEEEeC
Q 019847 189 CGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA--------------------------KAQICGLEWN 242 (335)
Q Consensus 189 ~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~--------------------------~~~~~~~~~~ 242 (335)
...|.+++|+ ++. ++++++ .|+.|++||+++++++..+.. ...+..+.|+
T Consensus 241 ~~~v~~~~~s-d~~-~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 241 KHFVSSICCG-KDY-LLLSAG--GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp SSCEEEEEEC-STT-EEEEEE--SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred CCceEEEEEC-CCC-EEEEEe--CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 9999999999 775 555555 899999999999998887753 2358899999
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEEC--CCC---ceeecccCCCCceeEeEEcCCCCEEEEEeC------CCcEEEEecC
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKY--PNM---TKVGELQSSNSRILDLSQSPDGLTVATAGA------DETIRFWEAF 311 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~--~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~------dg~v~iw~~~ 311 (335)
|++++++++. ..++.|++|++ .++ +.+..+..| ..|.+++|+|++.++++++. +..|.+|.+.
T Consensus 317 ~~~~~l~~~~-----~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 317 KNLPFVAFFV-----EATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SSSSEEEEEE-----TTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CCCCEEEEEE-----CCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 9999998772 37999999999 555 667777777 78999999996544444443 5568999887
Q ss_pred CCC
Q 019847 312 GPS 314 (335)
Q Consensus 312 ~~~ 314 (335)
...
T Consensus 391 ~~~ 393 (450)
T 2vdu_B 391 LNE 393 (450)
T ss_dssp TTT
T ss_pred cCC
Confidence 543
No 94
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.6e-39 Score=268.48 Aligned_cols=265 Identities=16% Similarity=0.239 Sum_probs=217.2
Q ss_pred cCCCCCceEEEEcCC----CCEEEEEECCCcEEEEeCCCceeEeeecc-----cccceeEeeecCCC----CCEEEEeeC
Q 019847 55 PGEDDYPTSVSWSHD----AKTLAVGYMDSKLQLWDAETSKLVRNLEG-----HHRRVATSSWNHWN----GHILTSGSK 121 (335)
Q Consensus 55 ~~~~~~v~~~~~~~~----~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~~----~~~l~~~~~ 121 (335)
.+|...|++++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+| + +.+|++|+.
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTY-DSNTSHPLLAVAGS 93 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEE-CTTTCCEEEEEEET
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEecc-CCCCCCCEEEEecC
Confidence 589999999999984 55677777788999999998887777664 447799999999 6 679999999
Q ss_pred CCcEEEEecccCCeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCC
Q 019847 122 DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPH 200 (335)
Q Consensus 122 dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 200 (335)
||.|++||+.+.+. ...+.+|...|.+++|+| ++++|++++.||.|++||++.......+..+..|...|.+++|+|+
T Consensus 94 dg~i~v~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 94 RGIIRIINPITMQC-IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TCEEEEECTTTCCE-EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCEEEEEEchhceE-eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 99999999986654 566778999999999999 9999999999999999998875433333333789999999999999
Q ss_pred CCcEEEEecCCCCCeEEEEECCCCceEEEee-----------------------------cCCcEeEEEeCCCCceeeee
Q 019847 201 QVNVLATGGGREDGCIKIWNVQKGTCIHGID-----------------------------AKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 201 ~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~ 251 (335)
+..+++ ++ .|+.|++||+++++....+. +...+.+++|+ +.+++++
T Consensus 173 ~~~l~~-~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~ 247 (366)
T 3k26_A 173 GEKIMS-CG--MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSK 247 (366)
T ss_dssp SSEEEE-EE--TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEE
T ss_pred CCEEEE-ec--CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEE
Confidence 875555 44 79999999999876544332 45678999998 6677766
Q ss_pred eeeeeecCCCeEEEEECCCCce--------------eecccCCCCceeEeEEcCC--CCEEEEEeCCCcEEEEecCCCCC
Q 019847 252 HGFSASGDGNKLCLWKYPNMTK--------------VGELQSSNSRILDLSQSPD--GLTVATAGADETIRFWEAFGPSG 315 (335)
Q Consensus 252 ~~~~~~~~~~~i~i~d~~~~~~--------------~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~v~iw~~~~~~~ 315 (335)
+.|+.|++||+.+++. +..+..|...|++++|+|+ +++|++++.||.|++||+..++.
T Consensus 248 ------~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 248 ------SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp ------CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred ------ecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 7799999999987654 6777889999999999999 99999999999999999998764
Q ss_pred CC----Ccccc--ccccccceec
Q 019847 316 DE----DSVSH--LAGLVSLKTS 332 (335)
Q Consensus 316 ~~----~~~~~--~~~i~~~~~~ 332 (335)
.. ....| ...|.++.++
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~s 344 (366)
T 3k26_A 322 HKAKCTTLTHHKCGAAIRQTSFS 344 (366)
T ss_dssp GGCEEEEECCTTCCSCEEEEEEC
T ss_pred ccccceEEcccccCCceEEEEeC
Confidence 43 34444 5777777764
No 95
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-38 Score=273.41 Aligned_cols=262 Identities=16% Similarity=0.170 Sum_probs=210.6
Q ss_pred cCCCCCceEEEEcC-CCCEEEEEECCCcEEEEeCCCcee--EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc
Q 019847 55 PGEDDYPTSVSWSH-DAKTLAVGYMDSKLQLWDAETSKL--VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR 131 (335)
Q Consensus 55 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 131 (335)
.+|...|++++|+| ++++||+|+.||.|+|||+.+++. ...+.+|...|++++|+|.++++|++|+.||+|++||++
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 46888999999999 567999999999999999987654 445668999999999998788999999999999999997
Q ss_pred cCCeeeEEee--cCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEec
Q 019847 132 VSNNVTSCIK--AHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGG 209 (335)
Q Consensus 132 ~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 209 (335)
... ...... .+...+.+++|+|++++|++|+.||.|++||++. +.+..+.+|...|.+++|+|+++.++++++
T Consensus 196 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~----~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 196 GNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG----KELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp SCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS----CBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred CCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc----ceeEEEecccceEEeeeecCCCceEEEEec
Confidence 433 222222 2344678999999999999999999999999864 346677889999999999999998998887
Q ss_pred CCCCCeEEEEECCCCceEEEe----ecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCC---
Q 019847 210 GREDGCIKIWNVQKGTCIHGI----DAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNS--- 282 (335)
Q Consensus 210 g~~d~~i~i~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~--- 282 (335)
.|+.|++||+++.+....+ .+...|.+++|+|++.+++++ +.|+.|++||+.+++....+..|..
T Consensus 271 --~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~------~~D~~i~iwd~~~~~~~~~~~~~~~~~~ 342 (435)
T 4e54_B 271 --VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT------DQKSEIRVYSASQWDCPLGLIPHPHRHF 342 (435)
T ss_dssp --TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE------ESSSCEEEEESSSSSSEEEECCCCCCCC
T ss_pred --CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE------cCCCEEEEEECCCCccceEEeccccccc
Confidence 8999999999887654333 345689999999999999987 7799999999999888777665543
Q ss_pred ---ceeEeEEcCCCCEEEEEe------------CCCcEEEEecCCCCCCCCc-cccccccccc
Q 019847 283 ---RILDLSQSPDGLTVATAG------------ADETIRFWEAFGPSGDEDS-VSHLAGLVSL 329 (335)
Q Consensus 283 ---~i~~~~~~~~~~~l~~~~------------~dg~v~iw~~~~~~~~~~~-~~~~~~i~~~ 329 (335)
.+....|+|++.+++++. .++.|++||...++..... ..|...|.++
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~ 405 (435)
T 4e54_B 343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSL 405 (435)
T ss_dssp SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCE
T ss_pred ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEE
Confidence 234557777777777664 3457999999887665543 3566666655
No 96
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-39 Score=281.74 Aligned_cols=246 Identities=15% Similarity=0.114 Sum_probs=200.3
Q ss_pred CCCCceEEEEcCCC---------CEEEEE-------------------ECCCcEEEEeCCCceeE----eeeccccccee
Q 019847 57 EDDYPTSVSWSHDA---------KTLAVG-------------------YMDSKLQLWDAETSKLV----RNLEGHHRRVA 104 (335)
Q Consensus 57 ~~~~v~~~~~~~~~---------~~l~~~-------------------~~dg~i~iw~~~~~~~~----~~~~~~~~~v~ 104 (335)
+...|.+++|+|++ ++||+| +.|++|+|||+.+++.. ..+..|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 46778888888876 566664 46789999999877642 34566778999
Q ss_pred EeeecCC-----CCCEEEEeeCCCcEEEEecccCCe----------eeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEE
Q 019847 105 TSSWNHW-----NGHILTSGSKDKSIINHDVRVSNN----------VTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVR 169 (335)
Q Consensus 105 ~~~~~~~-----~~~~l~~~~~dg~i~~~d~~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 169 (335)
+++|+|. ++.+|++++.||+|++||+..... ....+.+|...|++++|+++ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999993 257999999999999999976532 12356789999999999986 4899999999999
Q ss_pred EEEccCCCcccceeeccCCCCCeeEE--EecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC---CcEeEEEeCCC
Q 019847 170 IWERSKMSSSKSLHRFTDHCGGVKAL--AWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK---AQICGLEWNRH 244 (335)
Q Consensus 170 iwd~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~ 244 (335)
+||++++. .+...+.+|...|.++ .|+|++..++++++ .|++|++||++++++...+..+ ..+.+++|+|+
T Consensus 291 lWD~~~~~--~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 291 EFDLTDPE--VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp EEETTBCS--SCSEEEECSSSCEEEEEEECCTTSCCEEEEEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred EEECCCCC--CceEEeecccccEEEEEEEcCCCCCeEEEEec--cCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 99998642 2345567899999999 57777646777777 8999999999988776665543 24789999999
Q ss_pred CceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 245 HKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
++.++++ +.|+.|++||++++..+..+.+|.+.|++++|+|++++|++|+.||+|++|++...
T Consensus 367 ~~~l~s~------~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 367 IYSYIYS------DGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp TTEEEEE------CSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred cCeEEEe------CCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 9988876 67999999999999988888899999999999999999999999999999998654
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1e-36 Score=263.53 Aligned_cols=275 Identities=18% Similarity=0.254 Sum_probs=231.8
Q ss_pred cccccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEc--CCCCEEEEEECCCcEEEEeCCCc
Q 019847 14 MEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWS--HDAKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iw~~~~~ 90 (335)
.+...+.+++|+++ .+++++.|+.|++||+++++.. ..+.+|...|.+++|+ ++++++++|+.||.|++||+.++
T Consensus 160 ~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 160 GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCT--HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCC
T ss_pred CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEE--EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCC
Confidence 35667899999975 6777889999999999998754 4566899999999998 57899999999999999999876
Q ss_pred ee-----------------------EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCE
Q 019847 91 KL-----------------------VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEV 147 (335)
Q Consensus 91 ~~-----------------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i 147 (335)
+. +..+.+|...+.++. + +++++++++.||.|++||+++.+ ....+.+|...|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~~~-~~~~~~~~~~~v 313 (464)
T 3v7d_B 238 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQMK-CLYILSGHTDRI 313 (464)
T ss_dssp CCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTTTE-EEEEECCCSSCE
T ss_pred cccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCCCc-EEEEecCCCCCE
Confidence 52 445677888888874 4 78999999999999999998655 466678899999
Q ss_pred EEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 148 CGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 148 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
.+++|+|+++++++|+.||.|++||+++ .+.+..+.+|...|.++.|++ ..+++++ .||.|++||+++++..
T Consensus 314 ~~~~~~~~~~~l~sg~~dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~~---~~l~s~s--~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 314 YSTIYDHERKRCISASMDTTIRIWDLEN---GELMYTLQGHTALVGLLRLSD---KFLVSAA--ADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECS---SEEEEEE--TTSEEEEEETTTCCEE
T ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCC---CcEEEEEeCCCCcEEEEEEcC---CEEEEEe--CCCcEEEEECCCCcee
Confidence 9999999999999999999999999876 456778889999999999984 3556655 8999999999999888
Q ss_pred EEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeec-ccCCCCceeEeEEcCCCCEEEEEeCCCcEE
Q 019847 228 HGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE-LQSSNSRILDLSQSPDGLTVATAGADETIR 306 (335)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 306 (335)
........+..++|+|++..++++ + |+.|++||+.+++.+.. +..|...|.+++|+ +..++++++.||.+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~~------~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~ 457 (464)
T 3v7d_B 386 FSYHHTNLSAITTFYVSDNILVSG------S-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSF 457 (464)
T ss_dssp EEEECTTCCCEEEEEECSSEEEEE------E-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEE
T ss_pred eeecCCCCccEEEEEeCCCEEEEe------c-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEE
Confidence 888778888899999999998876 4 89999999999999886 67888999999997 344556666777665
Q ss_pred EEec
Q 019847 307 FWEA 310 (335)
Q Consensus 307 iw~~ 310 (335)
+|-+
T Consensus 458 i~~l 461 (464)
T 3v7d_B 458 LEIL 461 (464)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5543
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-38 Score=272.06 Aligned_cols=263 Identities=18% Similarity=0.241 Sum_probs=209.0
Q ss_pred EEEecCCceeeEEee-cCCCCCceEEEEcC-CCCEEEEEECCCcEEEEeCCC---ce---eEeeecccccceeEeeecCC
Q 019847 40 LWKWENGKVKKLLQV-PGEDDYPTSVSWSH-DAKTLAVGYMDSKLQLWDAET---SK---LVRNLEGHHRRVATSSWNHW 111 (335)
Q Consensus 40 vw~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~---~~---~~~~~~~~~~~v~~~~~~~~ 111 (335)
.|+. +++. ...+ .+|...|++++|+| ++++|++|+.||.|++||+.+ +. ....+ .|...|.+++|+|
T Consensus 47 ~w~~-~g~~--~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~- 121 (437)
T 3gre_A 47 MGNL-RGKL--IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIP- 121 (437)
T ss_dssp GGGC-CCCE--EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECT-
T ss_pred cccc-cceE--EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeC-
Confidence 4774 3443 3455 78999999999999 999999999999999999876 33 22222 4899999999999
Q ss_pred CCCEEEEeeCCCcEEEEecc---cCCeeeEEee----------c--CCCCEEEEE--eecCCCEEEEEeCCCeEEEEEcc
Q 019847 112 NGHILTSGSKDKSIINHDVR---VSNNVTSCIK----------A--HSGEVCGLK--WSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 112 ~~~~l~~~~~dg~i~~~d~~---~~~~~~~~~~----------~--~~~~i~~~~--~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
++++|++++.||.|++||++ .+.. ..... . +...+.++. +++++++|++++.||.|++||++
T Consensus 122 ~~~~l~s~s~dg~i~vwd~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 122 NFDAFAVSSKDGQIIVLKVNHYQQESE-VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TSSEEEEEETTSEEEEEEEEEEEETTE-EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEeCCCEEEEEEeccccCCce-eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999995 3332 22111 1 556677777 55789999999999999999988
Q ss_pred CCCcccceeeccC--CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee--cCCcEeEEEeC----CCCc
Q 019847 175 KMSSSKSLHRFTD--HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID--AKAQICGLEWN----RHHK 246 (335)
Q Consensus 175 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~~----~~~~ 246 (335)
.. +.+..+.. |...|.+++|+|++. ++++++ .||.|++||+++++++..+. ++.++.+++|+ |++.
T Consensus 201 ~~---~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 201 TL---ERLQIIENSPRHGAVSSICIDEECC-VLILGT--TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp TC---CEEEEEECCGGGCCEEEEEECTTSC-EEEEEE--TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE
T ss_pred CC---eeeEEEccCCCCCceEEEEECCCCC-EEEEEc--CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc
Confidence 74 44666666 789999999999986 555554 89999999999999998874 45689999555 5677
Q ss_pred eeeeeeeeeeecCCCeEEEEECCCCceeecccC--------------------------CCCceeEeEEcCCCCEEEEEe
Q 019847 247 EILSGHGFSASGDGNKLCLWKYPNMTKVGELQS--------------------------SNSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~--------------------------~~~~i~~~~~~~~~~~l~~~~ 300 (335)
+++++ +.|+.|++||+.+++.+..+.+ |...|++++|+ ++++|++|+
T Consensus 275 ~l~s~------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~ 347 (437)
T 3gre_A 275 IVVGG------SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDE 347 (437)
T ss_dssp EEEEE------STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEG
T ss_pred EEEEE------cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecC
Confidence 77776 7899999999999887666543 55568888888 778999999
Q ss_pred CCCcEEEEecCCCCCCCCccc
Q 019847 301 ADETIRFWEAFGPSGDEDSVS 321 (335)
Q Consensus 301 ~dg~v~iw~~~~~~~~~~~~~ 321 (335)
.||.|++||+..++......+
T Consensus 348 ~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 348 ATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp GGTEEEEEETTCGGGCEEEEC
T ss_pred CCCeEEEEECCCcccceEEec
Confidence 999999999998776654444
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-37 Score=282.36 Aligned_cols=251 Identities=22% Similarity=0.344 Sum_probs=212.0
Q ss_pred eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCC--CceeEeeecccccceeEeeecCCC--CCEEEEeeCCCcEEEE
Q 019847 53 QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE--TSKLVRNLEGHHRRVATSSWNHWN--GHILTSGSKDKSIINH 128 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~~~ 128 (335)
.+.+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|..+|++++|+| + +++|++|+.||.|++|
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeEEEE
Confidence 456899999999999999999999999999999998 5677888999999999999998 5 8999999999999999
Q ss_pred ecccCCe-eeEEeecCCCCEEEEEeecC--CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCC-----
Q 019847 129 DVRVSNN-VTSCIKAHSGEVCGLKWSNE--GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPH----- 200 (335)
Q Consensus 129 d~~~~~~-~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 200 (335)
|+.++.. ....+..|...|.+++|+|+ ++++++|+.||.|++||++.... .....+.+|...|.+++|+|.
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-TSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-CCCEEEECCSSCEEEEEECCCC----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-cceeEeecCCCceEEEEecCcccccc
Confidence 9987642 45567789999999999998 99999999999999999987543 234456779999999999994
Q ss_pred --------CCcEEEEecCCCCCeEEEEECCCCc----eEEEee-cCCcEeEEEeCCC---CceeeeeeeeeeecCCCeEE
Q 019847 201 --------QVNVLATGGGREDGCIKIWNVQKGT----CIHGID-AKAQICGLEWNRH---HKEILSGHGFSASGDGNKLC 264 (335)
Q Consensus 201 --------~~~~~~~~~g~~d~~i~i~d~~~~~----~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~ 264 (335)
+. ++++++ .||.|++||++++. ....+. +..++.+++|+|+ +..++++ +.||.|+
T Consensus 162 ~~~~~~~d~~-~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~------s~Dg~I~ 232 (753)
T 3jro_A 162 GEHNGTKESR-KFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV------SQDRTCI 232 (753)
T ss_dssp -----CGGGC-CEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE------ESSSCEE
T ss_pred cccccCCCCC-EEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEE------ecCCEEE
Confidence 54 555555 79999999998873 444444 3568999999999 8888887 7799999
Q ss_pred EEECCCCc-----eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 265 LWKYPNMT-----KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 265 i~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
+||+.+++ .......|...|++++|+|++++|++++.||.|++|++....
T Consensus 233 iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred EecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 99998864 344455688899999999999999999999999999998543
No 100
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=255.75 Aligned_cols=248 Identities=20% Similarity=0.329 Sum_probs=208.8
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCC--CCEEEEEECCCcEEEEeCCCc
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHD--AKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~ 90 (335)
+...+.+++|+++ .+++++.|+.|++||++.+.......+.+|...|++++|+|+ +++|++|+.||.|++||+.++
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 5567899999984 466667899999999987666666778899999999999987 999999999999999999998
Q ss_pred e--eEeeecccccceeEeeecCCC--CCEEEEeeCCCcEEEEecccCCe-eeEEeecCCCCEEEEEeec-----------
Q 019847 91 K--LVRNLEGHHRRVATSSWNHWN--GHILTSGSKDKSIINHDVRVSNN-VTSCIKAHSGEVCGLKWSN----------- 154 (335)
Q Consensus 91 ~--~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~----------- 154 (335)
+ .+..+..|...|.+++|+| + +.+|++++.|+.|++||++.... ....+..|...|.+++|+|
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred ceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 7 7777888999999999999 6 89999999999999999987643 3445678999999999999
Q ss_pred --CCCEEEEEeCCCeEEEEEccCCCcc-cceeeccCCCCCeeEEEecCCC--CcEEEEecCCCCCeEEEEECCCCc---e
Q 019847 155 --EGNLLASGGDDNVVRIWERSKMSSS-KSLHRFTDHCGGVKALAWSPHQ--VNVLATGGGREDGCIKIWNVQKGT---C 226 (335)
Q Consensus 155 --~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~g~~d~~i~i~d~~~~~---~ 226 (335)
++++|++++.||.|++||++..... .....+.+|...|.+++|+|++ ..++++++ .||.|++||++++. .
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPWK 246 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCCE
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe--CCCEEEEEeCCCCCccce
Confidence 6999999999999999999865432 3456778899999999999993 35666665 89999999999874 2
Q ss_pred EEEee---cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCC
Q 019847 227 IHGID---AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNM 271 (335)
Q Consensus 227 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 271 (335)
...+. +...+.+++|+|++++++++ +.||.|++|++...
T Consensus 247 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~------~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 247 KTLLKEEKFPDVLWRASWSLSGNVLALS------GGDNKVTLWKENLE 288 (379)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEE------ESSSSEEEEEEEET
T ss_pred eeeeccccCCCcEEEEEEcCCCCEEEEe------cCCCcEEEEeCCCC
Confidence 22222 45689999999999999887 66999999998743
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-36 Score=258.29 Aligned_cols=255 Identities=18% Similarity=0.358 Sum_probs=217.9
Q ss_pred ecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccC
Q 019847 54 VPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVS 133 (335)
Q Consensus 54 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 133 (335)
..+|...|.++++ ++++|++|+.||.|++||+.+++....+.+|...|.+++| ++++|++|+.||.|++||++++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCC
Confidence 3456778888876 8999999999999999999999999999999999999999 6789999999999999999876
Q ss_pred CeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC
Q 019847 134 NNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED 213 (335)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d 213 (335)
+. ...+..|...|.+++|++ +.+++|+.||.|++||++..........+.+|...|.+++| ++. .+++++ .|
T Consensus 204 ~~-~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~s~~--~d 275 (435)
T 1p22_A 204 EM-LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YIVSAS--GD 275 (435)
T ss_dssp CE-EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EEEEEE--TT
T ss_pred cE-EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EEEEEe--CC
Confidence 64 666788999999999974 59999999999999999876655445777889999999999 444 555555 79
Q ss_pred CeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCC
Q 019847 214 GCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPD 292 (335)
Q Consensus 214 ~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 292 (335)
|.|++||+++++.+..+.. ...+.++.+ ++..++++ +.|+.|++||+++++.+..+.+|...|.+++| +
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g------~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~ 345 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSG------SSDNTIRLWDIECGACLRVLEGHEELVRCIRF--D 345 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEE------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--C
T ss_pred CeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEE------eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--c
Confidence 9999999999999988875 457888888 45677766 77999999999999999999999999999999 7
Q ss_pred CCEEEEEeCCCcEEEEecCCCC---------CCCCcccccccccccee
Q 019847 293 GLTVATAGADETIRFWEAFGPS---------GDEDSVSHLAGLVSLKT 331 (335)
Q Consensus 293 ~~~l~~~~~dg~v~iw~~~~~~---------~~~~~~~~~~~i~~~~~ 331 (335)
+.+|++|+.||.|++||+.... .......|...|.++.+
T Consensus 346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 393 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF 393 (435)
T ss_dssp SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe
Confidence 7899999999999999997655 22334567777777665
No 102
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.6e-36 Score=254.49 Aligned_cols=267 Identities=19% Similarity=0.377 Sum_probs=217.5
Q ss_pred EEeecCCCCCce--EEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecc-cccceeEeeecCCCCCEEEEeeCCCcEEE
Q 019847 51 LLQVPGEDDYPT--SVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIIN 127 (335)
Q Consensus 51 ~~~~~~~~~~v~--~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 127 (335)
.+..++|...+. +++|+ +..+++++.||.|++||+.+++....+.. |...|.+++|+| ++++|++|+.||.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~i 160 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSH-DGSFLSVGLGNGLVDI 160 (401)
T ss_dssp EEECTTCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred eeeCCCCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECC-CCCEEEEECCCCeEEE
Confidence 344456655544 45555 45688888999999999999988877765 788999999999 9999999999999999
Q ss_pred EecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEE
Q 019847 128 HDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLAT 207 (335)
Q Consensus 128 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 207 (335)
||+.+++. ...+..|...|.+++|+ +++|++++.||.|++||++.. ......+.+|...|.+++|+|++.. +++
T Consensus 161 wd~~~~~~-~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~s 234 (401)
T 4aez_A 161 YDVESQTK-LRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIA--NHQIGTLQGHSSEVCGLAWRSDGLQ-LAS 234 (401)
T ss_dssp EETTTCCE-EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSE-EEE
T ss_pred EECcCCeE-EEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccC--cceeeEEcCCCCCeeEEEEcCCCCE-EEE
Confidence 99986654 56677999999999995 579999999999999998853 3456677889999999999998864 555
Q ss_pred ecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeE
Q 019847 208 GGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILD 286 (335)
Q Consensus 208 ~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 286 (335)
++ .|+.|++||+++++.+..+. +...+.+++|+|++..+++.. .++.|+.|++||+.+++.+..+. +...|.+
T Consensus 235 ~~--~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~---~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~ 308 (401)
T 4aez_A 235 GG--NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATG---GGTMDKQIHFWNAATGARVNTVD-AGSQVTS 308 (401)
T ss_dssp EE--TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEE---CCTTTCEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred Ee--CCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEe---cCCCCCEEEEEECCCCCEEEEEe-CCCcEEE
Confidence 54 79999999999999888876 456899999999887665431 11379999999999999988886 5567999
Q ss_pred eEEcCCCCEEEEE--eCCCcEEEEecCCCCCCC--Cccccccccccceec
Q 019847 287 LSQSPDGLTVATA--GADETIRFWEAFGPSGDE--DSVSHLAGLVSLKTS 332 (335)
Q Consensus 287 ~~~~~~~~~l~~~--~~dg~v~iw~~~~~~~~~--~~~~~~~~i~~~~~~ 332 (335)
++|+|++++|+++ +.||.|++|++..++... ...+|...|.++.++
T Consensus 309 ~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 309 LIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp EEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred EEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 9999999999994 489999999998854333 245777778777664
No 103
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.9e-35 Score=248.83 Aligned_cols=271 Identities=12% Similarity=0.145 Sum_probs=221.2
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEE-EEEECCCcEEEEeCCCceeEeeecccccceeEee
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTL-AVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSS 107 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~ 107 (335)
+++++.|+.|++||+++++....+. .| ..+.+++|+|+++++ ++++.|+.|++||+.+++.+..+..+. .+.+++
T Consensus 5 ~vs~~~d~~v~v~d~~~~~~~~~~~--~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSNKVTATIP--VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEcCCCCEEEEEECCCCeEEEEee--cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 4556689999999999998755443 44 458999999999987 566689999999999999988887554 899999
Q ss_pred ecCCCCCEE-EEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEE-EEEeCCCeEEEEEccCCCcccceeec
Q 019847 108 WNHWNGHIL-TSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLL-ASGGDDNVVRIWERSKMSSSKSLHRF 185 (335)
Q Consensus 108 ~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~ 185 (335)
|+| +++.| ++++.++.|++||+.+++. ...+. +...+.+++|+|+++.+ ++++.|+.|++||+++. +.+..+
T Consensus 81 ~sp-dg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~ 154 (391)
T 1l0q_A 81 VSP-DGKQVYVTNMASSTLSVIDTTSNTV-AGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK---AVINTV 154 (391)
T ss_dssp ECT-TSSEEEEEETTTTEEEEEETTTTEE-EEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEE
T ss_pred ECC-CCCEEEEEECCCCEEEEEECCCCeE-EEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC---cEEEEE
Confidence 999 77766 4555779999999986654 44444 45578999999999977 67788999999998764 334444
Q ss_pred cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEE
Q 019847 186 TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCL 265 (335)
Q Consensus 186 ~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 265 (335)
..+ ..+.+++|+|+++.++++++ .++.|++||+++++.+..+..+..+.+++|+|++++++++.. ...++.|++
T Consensus 155 ~~~-~~~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~---~~~~~~v~~ 228 (391)
T 1l0q_A 155 SVG-RSPKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNV---DKYFNTVSM 228 (391)
T ss_dssp ECC-SSEEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEE---CSSCCEEEE
T ss_pred ecC-CCcceEEECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEec---CcCCCcEEE
Confidence 433 55799999999988877766 789999999999999998888889999999999999887631 015899999
Q ss_pred EECCCCceeecccCCCCceeEeEEcCCCCEE-EEEeCCCcEEEEecCCCCCC
Q 019847 266 WKYPNMTKVGELQSSNSRILDLSQSPDGLTV-ATAGADETIRFWEAFGPSGD 316 (335)
Q Consensus 266 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~v~iw~~~~~~~~ 316 (335)
||+.+++.+..+..|.. +.+++|+|++++| ++++.|+.|++||+..++..
T Consensus 229 ~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 229 IDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp EETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred EECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 99999999888877654 7899999999877 67788999999999876543
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=258.00 Aligned_cols=284 Identities=17% Similarity=0.205 Sum_probs=229.5
Q ss_pred cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC-CCCEEEEEECCCcEEEEeCCCceeEeeec-------------cc
Q 019847 34 LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH-DAKTLAVGYMDSKLQLWDAETSKLVRNLE-------------GH 99 (335)
Q Consensus 34 ~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-------------~~ 99 (335)
.++.+++|+++.++... .+.+|...|++++|+| ++++|++|+.||.|++||+.+++....+. .|
T Consensus 21 ~~~~~~v~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (408)
T 4a11_B 21 AESTRRVLGLELNKDRD--VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVH 98 (408)
T ss_dssp HHHHHHHHTEEECTTEE--ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCC
T ss_pred ccCcceeeccccCccee--eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccC
Confidence 45678889888777544 4457999999999999 99999999999999999999876655443 58
Q ss_pred ccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeec---CCCEEEEEeCCCeEEEEEccCC
Q 019847 100 HRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN---EGNLLASGGDDNVVRIWERSKM 176 (335)
Q Consensus 100 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~ 176 (335)
...|.+++|+|.++.+|++++.||.|++||+++... ...+ .+...+.++.++| ++.++++++.||.|++||++..
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 176 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT-ADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc-ceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc
Confidence 899999999997788999999999999999986654 3333 3788899999998 4459999999999999998864
Q ss_pred CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCc-eEEEe----------------ecCCcEeEE
Q 019847 177 SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGT-CIHGI----------------DAKAQICGL 239 (335)
Q Consensus 177 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~-~~~~~----------------~~~~~~~~~ 239 (335)
..+..+..|...|.+++|+|++++++++++ .||.|++||++++. .+..+ .+...+.++
T Consensus 177 ---~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 177 ---SCSHILQGHRQEILAVSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ---CCCEEECCCCSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred ---ceeeeecCCCCcEEEEEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 446677789999999999999988787776 89999999998765 33333 234679999
Q ss_pred EeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCC-----CceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 240 EWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSN-----SRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
+|+|++++++++ +.|+.|++||+.+++.......+. ..+........+..+++++.|+.|++||+..++
T Consensus 252 ~~~~~~~~l~~~------~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~ 325 (408)
T 4a11_B 252 CFTSDGLHLLTV------GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE 325 (408)
T ss_dssp EECTTSSEEEEE------ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC
T ss_pred EEcCCCCEEEEe------cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc
Confidence 999999999887 679999999999988765544321 122222223345567778889999999999988
Q ss_pred CCCCccccccccccceec
Q 019847 315 GDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 315 ~~~~~~~~~~~i~~~~~~ 332 (335)
......+|...|.++.++
T Consensus 326 ~~~~~~~~~~~v~~~~~s 343 (408)
T 4a11_B 326 QITMLKGHYKTVDCCVFQ 343 (408)
T ss_dssp EEEEECCCSSCEEEEEEE
T ss_pred ceeeeccCCCeEEEEEEc
Confidence 887778888888888775
No 105
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.7e-35 Score=252.35 Aligned_cols=284 Identities=11% Similarity=0.090 Sum_probs=233.0
Q ss_pred ceeeeecCC-ceEEEe-cCCeEEEEEecCCceeeEE---eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE
Q 019847 19 SKVIDWGRN-NVLAVA-LGPVLFLWKWENGKVKKLL---QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV 93 (335)
Q Consensus 19 ~~~~~~~~~-~~~~~~-~~~~i~vw~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 93 (335)
+.+++|+++ .+++++ .++.|++||+.+++..... .+.+|...|.+++|+|+++++++++.|+.|++||+++++.+
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE
Confidence 457888874 444444 5678999999998876543 23478889999999999999999999999999999999999
Q ss_pred eeecccccceeEeeecCCCCCEE-EEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEe--------C
Q 019847 94 RNLEGHHRRVATSSWNHWNGHIL-TSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGG--------D 164 (335)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--------~ 164 (335)
..+..|...+.+++|+| +++.+ ++++.++.|++||+++++. ...+. +...+.+++|+|+++++++++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 205 ATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLE-IRKTD-KIGLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp EEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEE-EEECC-CCSEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred EEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcE-EEEec-CCCCceEEEEcCCCCEEEEEECCCCccccC
Confidence 99988999999999999 77766 5555899999999986554 44343 345699999999999999988 5
Q ss_pred CCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCC
Q 019847 165 DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRH 244 (335)
Q Consensus 165 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 244 (335)
||.|++||+++.. .+... .+...+.+++|+|+++.++++++ .|+.|++||+++++.+..+.....+.+++|+|+
T Consensus 282 dg~i~~~d~~~~~---~~~~~-~~~~~~~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d 355 (433)
T 3bws_A 282 GGRLGIYSMDKEK---LIDTI-GPPGNKRHIVSGNTENKIYVSDM--CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPD 355 (433)
T ss_dssp CEEEEEEETTTTE---EEEEE-EEEECEEEEEECSSTTEEEEEET--TTTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred CCeEEEEECCCCc---EEeec-cCCCCcceEEECCCCCEEEEEec--CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCC
Confidence 8899999988643 23322 34567899999999988888876 899999999999999999988888999999999
Q ss_pred Cceeeeeee---------eeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeC-CCcEEEEecCC
Q 019847 245 HKEILSGHG---------FSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGA-DETIRFWEAFG 312 (335)
Q Consensus 245 ~~~~~~~~~---------~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg~v~iw~~~~ 312 (335)
++.++++.. +..++.||.|++||..+++.+..+..+ ..+.+++|+|++++|++++. |+.|++|+++.
T Consensus 356 g~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 356 GKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp SSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 998887632 122334689999999999998888764 46899999999999988875 99999999874
No 106
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.2e-35 Score=245.19 Aligned_cols=252 Identities=16% Similarity=0.270 Sum_probs=207.9
Q ss_pred ccccceeeeecCC--ceEEEecCCeEEEEEecCCce--eeEEeecCCCCCceEEEEcC--CCCEEEEEECCCcEEEEeCC
Q 019847 15 EDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKV--KKLLQVPGEDDYPTSVSWSH--DAKTLAVGYMDSKLQLWDAE 88 (335)
Q Consensus 15 ~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~ 88 (335)
+...+.+++|+++ .+++++.|+.|++||+.++.. .....+.+|...|.+++|+| ++++|++|+.||.|++||++
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~ 89 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEED 89 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEC
T ss_pred cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecC
Confidence 5567899999884 477777899999999986542 34456678999999999999 69999999999999999998
Q ss_pred Cc---------eeEeeecccccceeEeeecCCC--CCEEEEeeCCCcEEEEecccCCeeeEE------------eecCCC
Q 019847 89 TS---------KLVRNLEGHHRRVATSSWNHWN--GHILTSGSKDKSIINHDVRVSNNVTSC------------IKAHSG 145 (335)
Q Consensus 89 ~~---------~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~------------~~~~~~ 145 (335)
++ +.+..+..|...|.+++|+| + +.+|++++.||.|++||+++....... ...|..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (351)
T 3f3f_A 90 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ 168 (351)
T ss_dssp TTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred CCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccc
Confidence 87 56778889999999999999 7 999999999999999999876542211 125788
Q ss_pred CEEEEEeecC---CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCC---cEEEEecCCCCCeEEEE
Q 019847 146 EVCGLKWSNE---GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQV---NVLATGGGREDGCIKIW 219 (335)
Q Consensus 146 ~i~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~g~~d~~i~i~ 219 (335)
.+.+++|+|+ +.++++++.|+.+.+|+.... ....+..+.+|...|.+++|+|++. .++++++ .||.|++|
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~--~dg~i~iw 245 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDG-KLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC--KDGRIRIF 245 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEETTEEEEEEECTTS-CEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE--TTSCEEEE
T ss_pred ceeEEEeccCCCCCcEEEEecCCCcEEEEccCCC-ceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc--CCCeEEEE
Confidence 9999999997 999999999999977776543 3345677888999999999999983 4666766 89999999
Q ss_pred ECCCC----------------------------------------------ceEEEeec-CCcEeEEEeCCCCceeeeee
Q 019847 220 NVQKG----------------------------------------------TCIHGIDA-KAQICGLEWNRHHKEILSGH 252 (335)
Q Consensus 220 d~~~~----------------------------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 252 (335)
|++++ +.+..+.. ...+.+++|+|++++++++
T Consensus 246 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~- 324 (351)
T 3f3f_A 246 KITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA- 324 (351)
T ss_dssp EEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE-
T ss_pred eCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe-
Confidence 99875 34444543 4689999999999999888
Q ss_pred eeeeecCCCeEEEEECCCCceeec
Q 019847 253 GFSASGDGNKLCLWKYPNMTKVGE 276 (335)
Q Consensus 253 ~~~~~~~~~~i~i~d~~~~~~~~~ 276 (335)
+.||.|++||+.+++....
T Consensus 325 -----~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 325 -----GDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp -----ETTSCEEEEEECTTSCEEE
T ss_pred -----cCCCcEEEEecCcCcchhh
Confidence 7899999999988765543
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=257.50 Aligned_cols=259 Identities=10% Similarity=0.045 Sum_probs=204.1
Q ss_pred ccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe
Q 019847 17 YYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 17 ~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 94 (335)
-.+.+++|+++ .+++++.|++|+ |...++. +.+|...|.+++|+|+| .++.+.+|+.+.. ...
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~-----l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~-~~~ 80 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD-----INCNSKNLFHVKEFPLE-------FENKLDFELAQQN-GLL 80 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSC-----CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS-CSS
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccce-----ecCCCccEEEEEECCCC-------CcceEEEEeCCCc-eEe
Confidence 56788999985 355566889999 7655542 36899999999999999 4555555554322 222
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCC-----CEEEEEeecCCCEEEEEeCCCeEE
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSG-----EVCGLKWSNEGNLLASGGDDNVVR 169 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~ 169 (335)
.+ .|...|.+++|+| ++..|++++.||.|++||... ....+. |.. .+.+++|||+|++||+|+.||+|+
T Consensus 81 ~~-~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 81 NS-QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp TT-SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred ec-CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 33 3578999999999 999999999999999999543 455455 655 599999999999999999999999
Q ss_pred EEEccCCCccc----ceeec----cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce---EEEee-c-CCcE
Q 019847 170 IWERSKMSSSK----SLHRF----TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC---IHGID-A-KAQI 236 (335)
Q Consensus 170 iwd~~~~~~~~----~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~---~~~~~-~-~~~~ 236 (335)
+||+....... .+..+ .+|...|.+++|+|++ +++++ .|+.+++||+..++. ..++. . ...|
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass---~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V 229 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAAL---SNNSVFSMTVSASSHQPVSRMIQNASRRKI 229 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEE---TTCCEEEECCCSSSSCCCEEEEECCCSSCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEe---CCCeEEEEECCCCccccceeeecccccCcE
Confidence 99988743211 24554 6688899999999998 55544 699999999988773 34553 3 4579
Q ss_pred eEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEE--cCCCCEEEEEeCCCcEEEEecC
Q 019847 237 CGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQ--SPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
.+++|+ +..++++ + ++.|++||+.+++......+|.+.|.+++| +|++..|+++++||+ ++|...
T Consensus 230 ~svaFs--g~~LASa------~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 230 TDLKIV--DYKVVLT------C-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CCEEEE--TTEEEEE------C-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEEE--CCEEEEE------e-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 999999 5777765 3 699999999988874444479999999999 999999999999999 999975
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=249.00 Aligned_cols=268 Identities=13% Similarity=0.191 Sum_probs=214.0
Q ss_pred EEeecCCCCCceEEEEcCC---CCEEEEEECCCcEEEEeCCC-ceeE-eeecccccceeEeeecCCCCCEEEEeeCCCcE
Q 019847 51 LLQVPGEDDYPTSVSWSHD---AKTLAVGYMDSKLQLWDAET-SKLV-RNLEGHHRRVATSSWNHWNGHILTSGSKDKSI 125 (335)
Q Consensus 51 ~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 125 (335)
...+.+|...|++++|+|+ |++|++|+.||.|++||+++ ++.+ ..+..|...|.+++|+| ++++|++++.||.|
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTA 110 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcE
Confidence 4456789999999999999 69999999999999999997 5544 77888999999999999 99999999999999
Q ss_pred EEEecccCCeeeEEeecCCCCEEEEEe--ecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCc
Q 019847 126 INHDVRVSNNVTSCIKAHSGEVCGLKW--SNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVN 203 (335)
Q Consensus 126 ~~~d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 203 (335)
++||+++... .. ...|...|.+++| +|++++|++++.||.|++||++... .+..+..+ ..+.++.+.++ .
T Consensus 111 ~iwd~~~~~~-~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~-~~~~~~~~~~~--~ 182 (368)
T 3mmy_A 111 KMWDLSSNQA-IQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN---PMMVLQLP-ERCYCADVIYP--M 182 (368)
T ss_dssp EEEETTTTEE-EE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS---CSEEEECS-SCEEEEEEETT--E
T ss_pred EEEEcCCCCc-ee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc---EEEEEecC-CCceEEEecCC--e
Confidence 9999986653 33 5679999999999 8899999999999999999988754 34444444 45667777654 4
Q ss_pred EEEEecCCCCCeEEEEECCCCceEEEee---cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCC---ceeecc
Q 019847 204 VLATGGGREDGCIKIWNVQKGTCIHGID---AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNM---TKVGEL 277 (335)
Q Consensus 204 ~~~~~~g~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~---~~~~~~ 277 (335)
+++.+ .++.+++|+++......... ......++.+.++...-..+ +++++.|+.|++||++.. ..+..+
T Consensus 183 ~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 183 AVVAT---AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTG--FALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp EEEEE---GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEE--EEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred eEEEe---CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCe--EEEecCCCcEEEEecCCCCccccceee
Confidence 55544 69999999998765443332 23455666666555441111 233478999999999987 556667
Q ss_pred cCCCC------------ceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 278 QSSNS------------RILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 278 ~~~~~------------~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
..|.. .|++++|+|++++|++++.||.|++||+..++.......|...|.++.++
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 324 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFN 324 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEEC
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEEC
Confidence 77765 69999999999999999999999999999887777777888888888775
No 109
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-36 Score=271.79 Aligned_cols=248 Identities=20% Similarity=0.330 Sum_probs=209.4
Q ss_pred cccccceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCC--CCEEEEEECCCcEEEEeCCC
Q 019847 14 MEDYYSKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHD--AKTLAVGYMDSKLQLWDAET 89 (335)
Q Consensus 14 ~~~~~~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~ 89 (335)
.+...+++++|+++ .+++++.||.|++||+.++.......+.+|...|++++|+|+ +++|++|+.||.|++||+.+
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 35567899999874 577778999999999997766667778899999999999988 99999999999999999998
Q ss_pred ce--eEeeecccccceeEeeecCCC--CCEEEEeeCCCcEEEEecccCCe-eeEEeecCCCCEEEEEeec----------
Q 019847 90 SK--LVRNLEGHHRRVATSSWNHWN--GHILTSGSKDKSIINHDVRVSNN-VTSCIKAHSGEVCGLKWSN---------- 154 (335)
Q Consensus 90 ~~--~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~---------- 154 (335)
++ .+..+..|...|.+++|+| + ++.+++|+.||.|++||++.... ....+..|...|.+++|+|
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred CcccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 87 6777888999999999999 6 89999999999999999987632 3455678999999999999
Q ss_pred ---CCCEEEEEeCCCeEEEEEccCCCcc-cceeeccCCCCCeeEEEecCCC--CcEEEEecCCCCCeEEEEECCCCceE-
Q 019847 155 ---EGNLLASGGDDNVVRIWERSKMSSS-KSLHRFTDHCGGVKALAWSPHQ--VNVLATGGGREDGCIKIWNVQKGTCI- 227 (335)
Q Consensus 155 ---~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~g~~d~~i~i~d~~~~~~~- 227 (335)
+++++++|+.||.|++||++..... .....+.+|..+|.+++|+|++ ..++++++ .||.|++||+++++..
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s--~Dg~I~iwd~~~~~~~~ 243 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS--QDRTCIIWTQDNEQGPW 243 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--SSSCEEEEEESSSSSCC
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe--cCCEEEEecCCCCCCcc
Confidence 5899999999999999999875332 4556778899999999999993 35666665 8999999999886421
Q ss_pred -----EEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC
Q 019847 228 -----HGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 228 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
....+...+.+++|+|++.+++++ +.||.|++|++..
T Consensus 244 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~------s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 244 KKTLLKEEKFPDVLWRASWSLSGNVLALS------GGDNKVTLWKENL 285 (753)
T ss_dssp BCCBSSSSCCSSCCCCEEECTTTCCEEEE------CSSSCEECCBCCS
T ss_pred eeEEeccCCCCCceEEEEEcCCCCEEEEE------cCCCEEEEEecCC
Confidence 111245679999999999999887 7799999999874
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-36 Score=250.35 Aligned_cols=266 Identities=12% Similarity=0.081 Sum_probs=204.6
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCC---------CceeEee
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE---------TSKLVRN 95 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~---------~~~~~~~ 95 (335)
.+..+++++.|+.|++||+++++....+. ...|.++.|+|+ +++++.|+.|++|+.. +++.+..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 34568888899999999999998766554 356788889888 9999999999999765 4444444
Q ss_pred ec-ccccceeEeeecCC-CCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEc
Q 019847 96 LE-GHHRRVATSSWNHW-NGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWER 173 (335)
Q Consensus 96 ~~-~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 173 (335)
+. .|...|.+++|+|. +++++++++.||.|++||++++.........+...+.+++|+|++++|++|+.||.|++||+
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNL 199 (343)
T ss_dssp EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEES
T ss_pred eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 43 56688999999983 57899999999999999999777633333456668999999999999999999999999999
Q ss_pred cCCCcccceeeccC-CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec----CCcE--eEEEeCCCCc
Q 019847 174 SKMSSSKSLHRFTD-HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA----KAQI--CGLEWNRHHK 246 (335)
Q Consensus 174 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~----~~~~--~~~~~~~~~~ 246 (335)
++.... ...+.. |.++|.+++|+|++..+ ++++ |+.|++||+++++.+..+.. ..++ .+++|+|+++
T Consensus 200 ~~~~~~--~~~~~~~h~~~v~~l~fs~~g~~l-~s~~---~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 200 SSPDQA--SSRFPVDEEAKIKEVKFADNGYWM-VVEC---DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp SCTTSC--CEECCCCTTSCEEEEEECTTSSEE-EEEE---SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred CCCCCC--ccEEeccCCCCEEEEEEeCCCCEE-EEEe---CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 875431 145566 99999999999999654 4443 44999999999877655442 1223 3699999999
Q ss_pred eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcC---CCCEEEEEeCCCcEEEEecCC
Q 019847 247 EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSP---DGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~v~iw~~~~ 312 (335)
+++++. +.++.+++|++.+....... .++..++|.+ +.+.+++++.||.+.++-...
T Consensus 274 ~l~~~s-----~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 274 NMIAYS-----NESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTN 333 (343)
T ss_dssp EEEEEE-----TTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEECS
T ss_pred EEEEec-----CCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEecC
Confidence 999862 33899999999766543332 5678889998 888999999999999885443
No 111
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.2e-35 Score=246.72 Aligned_cols=244 Identities=12% Similarity=0.125 Sum_probs=193.7
Q ss_pred ccccceeeeecCCceEEEe-----------cCCeEEEEEecCCcee--eEEe-----ecCCCCCceEEEEcCCCCEEEEE
Q 019847 15 EDYYSKVIDWGRNNVLAVA-----------LGPVLFLWKWENGKVK--KLLQ-----VPGEDDYPTSVSWSHDAKTLAVG 76 (335)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~-----------~~~~i~vw~~~~~~~~--~~~~-----~~~~~~~v~~~~~~~~~~~l~~~ 76 (335)
++..+.+++++++.+++++ .|+.+++|++.+.+.. .... ...+...+.+++|+|||++++++
T Consensus 72 ~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~a 151 (365)
T 4h5i_A 72 NDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIA 151 (365)
T ss_dssp TSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEE
T ss_pred CCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEE
Confidence 3445678888888777664 3668999998765421 1111 12345668999999999998765
Q ss_pred E--CCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeee-EEeecCCCCEEEEEee
Q 019847 77 Y--MDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVT-SCIKAHSGEVCGLKWS 153 (335)
Q Consensus 77 ~--~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~~ 153 (335)
+ .|++|+|||+++++.+..+. |...|.+++|+| +++++++++.+ .+.+|+..++.... .....|...|.+++|+
T Consensus 152 s~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fs 228 (365)
T 4h5i_A 152 SSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFI 228 (365)
T ss_dssp ESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEE
T ss_pred ECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEc
Confidence 5 68999999999999998886 778899999999 99999999855 56666666565543 3455688899999999
Q ss_pred cCCCEEEEEeCCC----eEEEEEccCCCcc-cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEE
Q 019847 154 NEGNLLASGGDDN----VVRIWERSKMSSS-KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIH 228 (335)
Q Consensus 154 ~~~~~l~~~~~dg----~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~ 228 (335)
|+++++++++.|+ .+++|++...... .....+.+|..+|++++|+|+++ ++++++ .|+.|++||+++++++.
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs--~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLAS--NDNSIALVKLKDLSMSK 305 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEE--TTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEc--CCCEEEEEECCCCcEEE
Confidence 9999999999887 6888998754321 22456678999999999999996 566665 89999999999999998
Q ss_pred Ee-e-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC
Q 019847 229 GI-D-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 229 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
.+ + +...|++++|+|+|++|+++ +.|++|+|||++.
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~------S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASV------SAANTIHIIKLPL 343 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEE------ETTSEEEEEECCT
T ss_pred EecCcccCCEEEEEECCCCCEEEEE------eCCCeEEEEEcCC
Confidence 86 3 45689999999999999988 7899999999964
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.4e-35 Score=248.16 Aligned_cols=276 Identities=13% Similarity=0.116 Sum_probs=191.3
Q ss_pred CceEEEecCCeEEEEEecCCce-------eeEEeecCCCCCceEEEE--------------------cCCCCEEEEEECC
Q 019847 27 NNVLAVALGPVLFLWKWENGKV-------KKLLQVPGEDDYPTSVSW--------------------SHDAKTLAVGYMD 79 (335)
Q Consensus 27 ~~~~~~~~~~~i~vw~~~~~~~-------~~~~~~~~~~~~v~~~~~--------------------~~~~~~l~~~~~d 79 (335)
..+++++.++.|.+|+...... ........+...+..+.| .+++.+|++++.|
T Consensus 31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d 110 (393)
T 4gq1_A 31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQD 110 (393)
T ss_dssp TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEETT
T ss_pred CCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCC
Confidence 3688889999999998643210 111111123334444444 3456689999999
Q ss_pred CcEEEEeCCCceeE-----eeecccccceeEeeecC-------CCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCE
Q 019847 80 SKLQLWDAETSKLV-----RNLEGHHRRVATSSWNH-------WNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEV 147 (335)
Q Consensus 80 g~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~-------~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i 147 (335)
++|++||+++++.. ..+.+|.+.|.+++|+| .++++|++|+.|++|++||+++..+ ...+..|...+
T Consensus 111 ~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~-~~~~~~~~~~v 189 (393)
T 4gq1_A 111 NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP-ILAGYPLSSPG 189 (393)
T ss_dssp SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE-EEEEEECSSCE
T ss_pred CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce-eeeecCCCCCc
Confidence 99999999887643 34678999999999986 3678999999999999999986665 44456788999
Q ss_pred EEEEeecCC-CEEEEEeCCCeEEEEEccCCCcccce----------------------eeccCCCCCeeEEEec-CCCCc
Q 019847 148 CGLKWSNEG-NLLASGGDDNVVRIWERSKMSSSKSL----------------------HRFTDHCGGVKALAWS-PHQVN 203 (335)
Q Consensus 148 ~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~----------------------~~~~~~~~~v~~~~~~-~~~~~ 203 (335)
.+++|+|++ ++|++++.||.|++||++........ ....+|...+.++.|+ |++..
T Consensus 190 ~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~ 269 (393)
T 4gq1_A 190 ISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSG 269 (393)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCE
T ss_pred EEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCE
Confidence 999999976 58999999999999998865322111 1124577889999987 67754
Q ss_pred EEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEEE------------------eCC-CCceeeeeeeeeeecCCCeE
Q 019847 204 VLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGLE------------------WNR-HHKEILSGHGFSASGDGNKL 263 (335)
Q Consensus 204 ~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~------------------~~~-~~~~~~~~~~~~~~~~~~~i 263 (335)
+++++ .|+.+++||+..++....+..+ ..+..+. ++| .+..++ ++++.|+.|
T Consensus 270 -l~s~s--~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~sgs~Dg~V 341 (393)
T 4gq1_A 270 -ILAMC--KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA-----TAHSQHGLI 341 (393)
T ss_dssp -EEEEC--TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE-----EEETTTTEE
T ss_pred -EEEEe--CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE-----EEECCCCEE
Confidence 45554 8999999999887665544321 1222222 222 222222 234789999
Q ss_pred EEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 264 CLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 264 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
++||+.+++.......|..+|++++|+|||++||+++.|| +.+|++..
T Consensus 342 ~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 342 QLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp EEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred EEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 9999999999888888999999999999999999998765 66776654
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.1e-34 Score=240.01 Aligned_cols=282 Identities=12% Similarity=0.086 Sum_probs=214.0
Q ss_pred CcccccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEE-EEEECCCcEEEEeCCCc
Q 019847 13 LMEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTL-AVGYMDSKLQLWDAETS 90 (335)
Q Consensus 13 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~ 90 (335)
..+...+.+++|+++ .+++++.+..+++|+.++++....... ..+..+++.++++.+ ++++.|+.|++||+.++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM----RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC----SCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec----CCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 345677899999984 677777777899999987765433322 247889999988887 45677899999999999
Q ss_pred eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEE--EeCCCeE
Q 019847 91 KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLAS--GGDDNVV 168 (335)
Q Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i 168 (335)
+.+..+. +...|.++.+++ + .++++ .++.|++||+.+.......+.. +...+++++ .++++ |+.||.|
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCE
T ss_pred cEEEEEE-CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEE
Confidence 9998887 677999999976 3 34444 4789999999876233333333 444566677 56766 5789999
Q ss_pred EEEEccCCCc------------ccc-eeeccCCCCCeeEEEecCCCCcEEEEecCCCCCe-EEEEECCCCceEEEee---
Q 019847 169 RIWERSKMSS------------SKS-LHRFTDHCGGVKALAWSPHQVNVLATGGGREDGC-IKIWNVQKGTCIHGID--- 231 (335)
Q Consensus 169 ~iwd~~~~~~------------~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~-i~i~d~~~~~~~~~~~--- 231 (335)
++||++.... ..+ +..+.+|.++|.+++|+|++. ++++++ .|++ |++||+++++++..+.
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~-~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD-MVATCS--QDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSS-EEEEEE--TTCSEEEEEETTTCCEEEEEECTT
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC-EEEEEe--CCCCEEEEEECCCCcEEEEEEcCC
Confidence 9999886431 012 667889999999999999986 555555 8998 9999999999999998
Q ss_pred cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCcee--eccc---------------------CCCCceeEeE
Q 019847 232 AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKV--GELQ---------------------SSNSRILDLS 288 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~--~~~~---------------------~~~~~i~~~~ 288 (335)
+...+.+++|+|++++++++ +.|+.|++||+...... ..+. .+......++
T Consensus 239 h~~~v~~~~~s~~~~~l~s~------s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVV------SDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEE------ETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred CCCcEEEEEECCCCCEEEEE------ECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 56789999999999999988 77999999999765321 1111 1122346789
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q 019847 289 QSPDGLTVATAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 289 ~~~~~~~l~~~~~dg~v~iw~~~~~~~~~ 317 (335)
|++++++|++++.||.+++|++.......
T Consensus 313 ~~~d~~~l~~~~~dg~~~~~~~~~~~~~~ 341 (355)
T 3vu4_A 313 WISESSLVVVWPHTRMIETFKVVFDDEME 341 (355)
T ss_dssp ESSSSEEEEEETTTTEEEEEEEEEETTTT
T ss_pred EeCCCCEEEEEeCCCeEEEEEEEcCCCCc
Confidence 99999999999999999999998765443
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.6e-35 Score=251.10 Aligned_cols=248 Identities=21% Similarity=0.428 Sum_probs=206.2
Q ss_pred CcccccceeeeecCC---ceEEEecCCeEEEEEecC--------CceeeEEeecCCCCCceEEEEcCCCC-EEEEEECCC
Q 019847 13 LMEDYYSKVIDWGRN---NVLAVALGPVLFLWKWEN--------GKVKKLLQVPGEDDYPTSVSWSHDAK-TLAVGYMDS 80 (335)
Q Consensus 13 ~~~~~~~~~~~~~~~---~~~~~~~~~~i~vw~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg 80 (335)
..+...+++++|+++ .+++++.+|.|++|++.+ ++......+.+|...|++++|+|+++ +|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 345667899999984 355556799999999986 23445566779999999999999988 999999999
Q ss_pred cEEEEeCCCcee-------EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC--eeeEEeecCCCCEEEEE
Q 019847 81 KLQLWDAETSKL-------VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN--NVTSCIKAHSGEVCGLK 151 (335)
Q Consensus 81 ~i~iw~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~ 151 (335)
.|++|++.++.. ...+..|...|.+++|+|.++.+|++++.||.|++||+++.. .....+..|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 999999987322 455678999999999999778999999999999999999763 44556778999999999
Q ss_pred eecCCC-EEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-------
Q 019847 152 WSNEGN-LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK------- 223 (335)
Q Consensus 152 ~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~------- 223 (335)
|+|++. +|++|+.||.|++||++... ..+..+..|...|.+++|+|+++.++++++ .|+.|++||+..
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEECCSSCEEEEEECSSCTTEEEEEE--TTSCCEEEEGGGTTCCCCH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEeecCCCCEEEEEECCCCCCEEEEEe--CCCcEEEEeCCCCccccCc
Confidence 999887 78999999999999998642 356777789999999999999988888877 899999999987
Q ss_pred -------CceEEEeec-CCcEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCC
Q 019847 224 -------GTCIHGIDA-KAQICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 224 -------~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
.+.+..+.. ...+.+++|+|+++ .++++ +.|+.|++|++..
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~------s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV------SEDNIMQVWQMAE 410 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEE------ETTSEEEEEEECH
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEE------ECCCCEEEeEccc
Confidence 245555544 45799999999999 56655 7799999999864
No 115
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.6e-35 Score=251.26 Aligned_cols=248 Identities=18% Similarity=0.319 Sum_probs=206.4
Q ss_pred cccccceeeeecC-C--ceEEEecCCeEEEEEecCCce-----eeEEeecCCCCCceEEEEcCCC-CEEEEEECCCcEEE
Q 019847 14 MEDYYSKVIDWGR-N--NVLAVALGPVLFLWKWENGKV-----KKLLQVPGEDDYPTSVSWSHDA-KTLAVGYMDSKLQL 84 (335)
Q Consensus 14 ~~~~~~~~~~~~~-~--~~~~~~~~~~i~vw~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i 84 (335)
.+...+.+++|++ + .+++++.|+.|++||+.++.. .....+.+|...|.+++|+|++ ++|++++.||.|++
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 158 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILV 158 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEE
Confidence 3567789999987 3 566777899999999998743 2345667899999999999998 69999999999999
Q ss_pred EeCCCceeEeee--cccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCC-EEEEEeecCCCEEEE
Q 019847 85 WDAETSKLVRNL--EGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGE-VCGLKWSNEGNLLAS 161 (335)
Q Consensus 85 w~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~~ 161 (335)
||+++++.+..+ ..|...|.+++|+| ++++|++++.||.|++||++++.........|.+. +.++.|+|++++|++
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred EECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 999999999999 78999999999999 99999999999999999999766544432678776 899999999999999
Q ss_pred E---eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce----EEEeecCC
Q 019847 162 G---GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC----IHGIDAKA 234 (335)
Q Consensus 162 ~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~----~~~~~~~~ 234 (335)
| +.|+.|++||++.......... ..+...+.+++|+|++..++++++ .|+.|++||+.+++. +..+.+..
T Consensus 238 g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~g~--~dg~i~i~d~~~~~~~~~~l~~~~~~~ 314 (402)
T 2aq5_A 238 GFSRMSERQVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPDTNIVYLCGK--GDSSIRYFEITSEAPFLHYLSMFSSKE 314 (402)
T ss_dssp EECTTCCEEEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETTTTEEEEEET--TCSCEEEEEECSSTTCEEEEEEECCSS
T ss_pred eccCCCCceEEEEcCccccCCceEEe-ccCCCceeEEEEcCCCCEEEEEEc--CCCeEEEEEecCCCcceEeecccccCC
Confidence 9 7899999999987543222222 246778999999999988877775 799999999998873 33344568
Q ss_pred cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 235 QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
++.+++|+|++.+++++ ++.+++|++.+++.
T Consensus 315 ~v~~~~~sp~~~~~~s~--------~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 315 SQRGMGYMPKRGLEVNK--------CEIARFYKLHERKC 345 (402)
T ss_dssp CCSEEEECCGGGSCGGG--------TEEEEEEEEETTEE
T ss_pred cccceEEecccccceec--------ceeEEEEEcCCCcE
Confidence 89999999999988755 77999999987543
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-35 Score=252.16 Aligned_cols=239 Identities=13% Similarity=0.105 Sum_probs=198.9
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCce---eEeeecc-------------------------------------
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK---LVRNLEG------------------------------------- 98 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~------------------------------------- 98 (335)
.++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999966666 57899999999988 5555442
Q ss_pred -----------------cccceeEeeecCCCCCEE-EEeeCCCcEEEEecc--cCCeeeEEee--cCCCCEEEEEeecCC
Q 019847 99 -----------------HHRRVATSSWNHWNGHIL-TSGSKDKSIINHDVR--VSNNVTSCIK--AHSGEVCGLKWSNEG 156 (335)
Q Consensus 99 -----------------~~~~v~~~~~~~~~~~~l-~~~~~dg~i~~~d~~--~~~~~~~~~~--~~~~~i~~~~~~~~~ 156 (335)
|...|.+++|+| ++++| ++++.||.|++||+. ++.. ...+. .|...|.+++|+|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNV-LKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp ----------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSC-EEEEEEEECSSCEEEEEECTTS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCce-eeeeecccCCCCceEEEEcCCC
Confidence 223699999999 88885 899999999999998 5554 34343 678899999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCccc-ceeeccCCCCCeeEEEecCC---CCcEEEEecCCCCCeEEEEECCCCceEEEee-
Q 019847 157 NLLASGGDDNVVRIWERSKMSSSK-SLHRFTDHCGGVKALAWSPH---QVNVLATGGGREDGCIKIWNVQKGTCIHGID- 231 (335)
Q Consensus 157 ~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~- 231 (335)
++|++++.||.+++|++....... ....+.+|...|.+++|+|+ +. ++++++ .|+.|++||+++++.+..+.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~--~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSD--RDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEE--TTSCEEEEEESCTTCEEEECC
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEc--CCCcEEEEECCCCceeeeeec
Confidence 999999999999999988765443 44467789999999999999 64 555555 89999999999998887743
Q ss_pred -cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC-------------------------CCCcee
Q 019847 232 -AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS-------------------------SNSRIL 285 (335)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------------------------~~~~i~ 285 (335)
+...+.+++|+ ++.+++++ +.|+.|++||+.+++.+..+.. ....|.
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~------~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSA------GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEE------ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred CCCCceEEEEEC-CCCEEEEE------eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 45789999999 99999987 6799999999999998777652 234689
Q ss_pred EeEEcCCCCEEEEEe-CCCcEEEEec
Q 019847 286 DLSQSPDGLTVATAG-ADETIRFWEA 310 (335)
Q Consensus 286 ~~~~~~~~~~l~~~~-~dg~v~iw~~ 310 (335)
+++|+|++++|++++ .|+.|++|++
T Consensus 312 ~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 312 KIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999999998 8999999999
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=5.3e-34 Score=228.15 Aligned_cols=291 Identities=12% Similarity=0.042 Sum_probs=200.1
Q ss_pred cccccccCCCCcccccceeeeecC----CceEEEecCCeEEEEEecCC-ceeeEEeecCCCCCceEEEEcCCCCEEEE-E
Q 019847 3 REARILDAPYLMEDYYSKVIDWGR----NNVLAVALGPVLFLWKWENG-KVKKLLQVPGEDDYPTSVSWSHDAKTLAV-G 76 (335)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~vw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~ 76 (335)
+....+..|.-.-...+.++-|.. +..+.++....|++|+..++ +.....+...|+.+|..+.+.||..-|++ +
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 105 (356)
T 2w18_A 26 QLVSELKNPSGSCSVDVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVA 105 (356)
T ss_dssp EEEEEECCCCSSCEEEEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEE
T ss_pred eeeehhcCCCCCeEEEEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeee
Confidence 334455566555566677777765 23666778899999999887 23456777789999999999996543333 2
Q ss_pred ECCC---cEEEEeCCCc----eeEeeecccccceeEeeecCCCCCEEEEee--CCCcEEEEecccCCeeeEEeecCCCCE
Q 019847 77 YMDS---KLQLWDAETS----KLVRNLEGHHRRVATSSWNHWNGHILTSGS--KDKSIINHDVRVSNNVTSCIKAHSGEV 147 (335)
Q Consensus 77 ~~dg---~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~i 147 (335)
-.+= .|+..-+... .....-.+|...+..+ + +++++.+++ .|+.|++|++....+....+..|...+
T Consensus 106 ~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v 181 (356)
T 2w18_A 106 LGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEE 181 (356)
T ss_dssp ECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSS
T ss_pred eccccccceEEEEECCCccccccEEEeCCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCce
Confidence 2111 1111111111 1111112344444443 3 666666644 699999999966566677778899999
Q ss_pred EEEEeec---CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCC---CCeeEEEecCCCCcEE-----------EEecC
Q 019847 148 CGLKWSN---EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHC---GGVKALAWSPHQVNVL-----------ATGGG 210 (335)
Q Consensus 148 ~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~-----------~~~~g 210 (335)
+.++|+| ++.+|++++.|++|++||++++ +.++++.+|. ..+.+++|+|++..++ +++
T Consensus 182 ~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TG---k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSG-- 256 (356)
T 2w18_A 182 TILTFAEVQGMQEALLGTTIMNNIVIWNLKTG---QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLR-- 256 (356)
T ss_dssp CEEEEEEEETSTTEEEEEETTSEEEEEETTTC---CEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------
T ss_pred eeEEeeccCCCCceEEEecCCCcEEEEECCCC---cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeecc--
Confidence 9999999 7799999999999999998875 4466665543 3577889999997553 344
Q ss_pred CCCCeEEEEECCCCceEEEee-----cC-CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCce
Q 019847 211 REDGCIKIWNVQKGTCIHGID-----AK-AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRI 284 (335)
Q Consensus 211 ~~d~~i~i~d~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i 284 (335)
+.|++|++||..+++.+..+. .+ ....+.. ..+..++++ +.|++|+|||+.+++.+.++.+|...+
T Consensus 257 s~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~--~sg~~lASg------S~DgTIkIWDl~tGk~l~tL~gH~~~v 328 (356)
T 2w18_A 257 SPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGD--VKDHCAAAI------LTSGTIAIWDLLLGQCTALLPPVSDQH 328 (356)
T ss_dssp -CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEE--EETTEEEEE------ETTSCEEEEETTTCSEEEEECCC--CC
T ss_pred CCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccc--cCCCEEEEE------cCCCcEEEEECCCCcEEEEecCCCCCe
Confidence 489999999999998876542 11 1122222 224444544 789999999999999999999998765
Q ss_pred e-EeEEcCCCCEEEEEeCCCcEEEEec
Q 019847 285 L-DLSQSPDGLTVATAGADETIRFWEA 310 (335)
Q Consensus 285 ~-~~~~~~~~~~l~~~~~dg~v~iw~~ 310 (335)
. .++|+|||++|++|+.|++|+|||+
T Consensus 329 vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 329 WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 5 5899999999999999999999996
No 118
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.8e-33 Score=239.98 Aligned_cols=258 Identities=18% Similarity=0.404 Sum_probs=215.4
Q ss_pred CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec--ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeee
Q 019847 60 YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE--GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVT 137 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~ 137 (335)
.++.++|+++ +.||+|. |++|+|||..+++....+. .|...|++++|+| ++++|++|+.||.|++||+++++. .
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~-~ 182 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKR-L 182 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-E
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcE-E
Confidence 4678999975 4777775 9999999999998877654 5778899999999 999999999999999999986654 6
Q ss_pred EEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEE
Q 019847 138 SCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIK 217 (335)
Q Consensus 138 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~ 217 (335)
..+.+|...+.+++++ +.+|++|+.|+.+++||.+.. ...+..+.+|...+..+.|+|++..+++ ++ .|+.++
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~--~~~~~~~~~h~~~~~~~~~~~~g~~l~s-~~--~D~~v~ 255 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLAS-GG--NDNLVN 255 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEEE-EE--TTSCEE
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc--ceeeEEecccccceeeeeecCCCCeeee-ee--ccccce
Confidence 6688999999988875 579999999999999998764 3456677889999999999999975554 44 799999
Q ss_pred EEECCCCce----EEE-eecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCC
Q 019847 218 IWNVQKGTC----IHG-IDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPD 292 (335)
Q Consensus 218 i~d~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 292 (335)
+||..+++. +.. ..+...+.+++|+|.+..+++. ..++.|+.|++||+.+++....+..|. .+.++.|+|+
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~---~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~ 331 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT---GGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPH 331 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEE---EECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETT
T ss_pred EEeeccccccceeeeeecccCCceeeeeeCCCcccEEEE---EeecCCCEEEEEeCCccccceeecccc-ceeeeeecCC
Confidence 999987753 222 3346689999999988766532 234789999999999999998887664 5889999999
Q ss_pred CCEEEEEe--CCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 293 GLTVATAG--ADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 293 ~~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
++.+++++ .||.|++||+.+.+....+.+|.+.|.++.++
T Consensus 332 ~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~s 373 (420)
T 4gga_A 332 YKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 373 (420)
T ss_dssp TTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred CCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 99988765 79999999999998888888999999998875
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=246.22 Aligned_cols=258 Identities=13% Similarity=0.102 Sum_probs=197.0
Q ss_pred ccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe
Q 019847 15 EDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 94 (335)
+...+.+++|+|+. .++.|++.+++....+.+ .|...|.+++|+|+|++||+++.||.|++||.++ ++.
T Consensus 51 h~~~v~~V~FsPdg--------~~~~~~~~~~~~~~~~~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~ 119 (588)
T 2j04_A 51 NSKNLFHVKEFPLE--------FENKLDFELAQQNGLLNS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLT 119 (588)
T ss_dssp BGGGTEEEEEECCC--------CCCTTTTSCCCSSCSSTT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEE
T ss_pred CCccEEEEEECCCC--------CcceEEEEeCCCceEeec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eee
Confidence 44556666666654 455555555543333433 4588999999999999999999999999999654 666
Q ss_pred eeccccc-----ceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe------eeEEe----ecCCCCEEEEEeecCCCEE
Q 019847 95 NLEGHHR-----RVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN------VTSCI----KAHSGEVCGLKWSNEGNLL 159 (335)
Q Consensus 95 ~~~~~~~-----~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~------~~~~~----~~~~~~i~~~~~~~~~~~l 159 (335)
.+. |.. .+.+++|+| ++++|++|+.||+|++||+..+.. ....+ .+|...|.+++|+|++ +
T Consensus 120 ~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L 195 (588)
T 2j04_A 120 NLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L 195 (588)
T ss_dssp ECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E
T ss_pred ecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E
Confidence 666 665 599999999 999999999999999999987642 24444 6678899999999998 8
Q ss_pred EEEeCCCeEEEEEccCCCcccceeec-cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce-EEEeecCCcEe
Q 019847 160 ASGGDDNVVRIWERSKMSSSKSLHRF-TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC-IHGIDAKAQIC 237 (335)
Q Consensus 160 ~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~-~~~~~~~~~~~ 237 (335)
++++.|+.|++||+.........+.+ .+|...|.+++|+ + ..+++++ ++.|++||+.+++. ...+.+...+.
T Consensus 196 aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g-~~LASa~---~~tIkLWd~~~~~~~~~~~gh~~~V~ 269 (588)
T 2j04_A 196 VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D-YKVVLTC---PGYVHKIDLKNYSISSLKTGSLENFH 269 (588)
T ss_dssp EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T-TEEEEEC---SSEEEEEETTTTEEEEEECSCCSCCC
T ss_pred EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--C-CEEEEEe---CCeEEEEECCCCeEEEEEcCCCceEE
Confidence 88899999999998865432223445 3688899999999 4 4666654 69999999998887 44446677899
Q ss_pred EEEe--CCCCceeeeeeeeeeecCCCeEEEEECCC-----------------------CceeecccCCCCceeEeEEcCC
Q 019847 238 GLEW--NRHHKEILSGHGFSASGDGNKLCLWKYPN-----------------------MTKVGELQSSNSRILDLSQSPD 292 (335)
Q Consensus 238 ~~~~--~~~~~~~~~~~~~~~~~~~~~i~i~d~~~-----------------------~~~~~~~~~~~~~i~~~~~~~~ 292 (335)
.+.| +|++..++++ .++|. ++|..+. +..+..+.+ ...|.+++|+||
T Consensus 270 ~va~~~s~d~~~La~a------~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPd 341 (588)
T 2j04_A 270 IIPLNHEKESTILLMS------NKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPD 341 (588)
T ss_dssp EEEETTCSSCEEEEEC------SSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTT
T ss_pred EEEeeeCCCCCEEEEE------cCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCC
Confidence 9999 9999888877 66888 8887631 111222222 446899999999
Q ss_pred CCEEEEEeC
Q 019847 293 GLTVATAGA 301 (335)
Q Consensus 293 ~~~l~~~~~ 301 (335)
|+.+|+++.
T Consensus 342 G~~lA~~~~ 350 (588)
T 2j04_A 342 GYSIAIVYD 350 (588)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEe
Confidence 999998873
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=239.72 Aligned_cols=231 Identities=8% Similarity=0.026 Sum_probs=186.8
Q ss_pred EcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc---------cCCee
Q 019847 66 WSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR---------VSNNV 136 (335)
Q Consensus 66 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~---------~~~~~ 136 (335)
+.++++++++|+.||.|++||+++++.+..+. ...|.++.|+| . +++++.|+.|++|+.. +...+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 44578899999999999999999999888876 57788999988 4 9999999999999765 33323
Q ss_pred eEEeecCCCCEEEEEeec--CCCEEEEEeCCCeEEEEEccCCCcccceeec-cCCCCCeeEEEecCCCCcEEEEecCCCC
Q 019847 137 TSCIKAHSGEVCGLKWSN--EGNLLASGGDDNVVRIWERSKMSSSKSLHRF-TDHCGGVKALAWSPHQVNVLATGGGRED 213 (335)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~d 213 (335)
......|...|.+++|+| +++++++++.||.|++||+++... +... ..+...+.+++|+|++. ++++++ .|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~---~~~~~~~~~~~i~~~~~~pdg~-~lasg~--~d 191 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ---YIVHSAKSDVEYSSGVLHKDSL-LLALYS--PD 191 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE---EEEECCCSSCCCCEEEECTTSC-EEEEEC--TT
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE---EEEEecCCCCceEEEEECCCCC-EEEEEc--CC
Confidence 344446778999999999 999999999999999999887543 3333 33556799999999985 666655 89
Q ss_pred CeEEEEECCCCceE-EEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC---CCCcee--
Q 019847 214 GCIKIWNVQKGTCI-HGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS---SNSRIL-- 285 (335)
Q Consensus 214 ~~i~i~d~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~---~~~~i~-- 285 (335)
|.|++||+++++.+ ..+.. ..++.+++|+|++.+++++ + ++.|++||+++.+.+..+.. |...+.
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~------~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVE------C-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEE------E-SSBEEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEE------e-CCeEEEEEcCCCCcceeecccccccccccce
Confidence 99999999999887 66665 6789999999999999887 4 55999999999887766554 444444
Q ss_pred EeEEcCCCCEEEEEeC-CCcEEEEecCCCCC
Q 019847 286 DLSQSPDGLTVATAGA-DETIRFWEAFGPSG 315 (335)
Q Consensus 286 ~~~~~~~~~~l~~~~~-dg~v~iw~~~~~~~ 315 (335)
+++|+|++++|++++. |+.+++|++.....
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 5999999999999998 99999999976544
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.4e-33 Score=235.12 Aligned_cols=250 Identities=16% Similarity=0.142 Sum_probs=183.2
Q ss_pred EEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEE-EE
Q 019847 40 LWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHIL-TS 118 (335)
Q Consensus 40 vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~ 118 (335)
+|++.+.+. ......|...|++++|+|+|++|++|+.+| +++|++++++....... ..+..+.+.+ +++.+ ++
T Consensus 3 i~s~~~~~~--~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNP--IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLH-RTNYVAFV 76 (355)
T ss_dssp ------------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECT-TSSEEEEE
T ss_pred cccccccCC--ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcC-CCCEEEEE
Confidence 455555543 334568999999999999999999998775 88999998876655432 3577888888 55555 67
Q ss_pred eeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEec
Q 019847 119 GSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWS 198 (335)
Q Consensus 119 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 198 (335)
++.|+.|++||..+++.+ ..+. +...|.+++++++ .++++. |+.|++||+.+.. +.+..+.. +...++++
T Consensus 77 ~~~d~~v~iWd~~~~~~~-~~~~-~~~~v~~v~~~~~--~~~~~~-~~~i~i~d~~~~~--~~~~~~~~---~~~~~~~s 146 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDV-SRIK-VDAPVKDLFLSRE--FIVVSY-GDVISVFKFGNPW--KRITDDIR---FGGVCEFS 146 (355)
T ss_dssp CSSTTEEEEEETTTTEEE-EEEE-CSSCEEEEEECSS--EEEEEE-TTEEEEEESSTTC--CBSSCCEE---EEEEEEEE
T ss_pred ECCccEEEEEECCCCcEE-EEEE-CCCceEEEEEcCC--EEEEEE-cCEEEEEECCCCc--eeeEEecc---CCceEEEE
Confidence 888999999999876653 3343 7779999999876 344443 8899999988751 22333332 44456677
Q ss_pred CCCCcEEEEecCCCCCeEEEEECCCCc----------------eEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCC
Q 019847 199 PHQVNVLATGGGREDGCIKIWNVQKGT----------------CIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGN 261 (335)
Q Consensus 199 ~~~~~~~~~~~g~~d~~i~i~d~~~~~----------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (335)
+ ..++++ +|..||.|++||+++++ .+..+. +..++.+++|+|++++++++ +.|+
T Consensus 147 ~--~~la~~-sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~------s~d~ 217 (355)
T 3vu4_A 147 N--GLLVYS-NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC------SQDG 217 (355)
T ss_dssp T--TEEEEE-ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE------ETTC
T ss_pred c--cEEEEe-CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE------eCCC
Confidence 7 344444 23389999999999865 144454 45689999999999999988 7799
Q ss_pred e-EEEEECCCCceeeccc-C-CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 262 K-LCLWKYPNMTKVGELQ-S-SNSRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 262 ~-i~i~d~~~~~~~~~~~-~-~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
. |++||+++++.+..+. + |...|++++|+|++++|++++.|+.|++||+..+.
T Consensus 218 ~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 218 TIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp SEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 8 9999999999999998 5 99999999999999999999999999999998764
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.5e-32 Score=221.71 Aligned_cols=257 Identities=18% Similarity=0.385 Sum_probs=211.3
Q ss_pred ceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec--ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeE
Q 019847 61 PTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE--GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS 138 (335)
Q Consensus 61 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 138 (335)
.++++||+++ +||+| .|++|+|||+++++.+..+. .|...|++++|+| ++++|++|+.||.|++||+++++. ..
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~~-~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKR-LR 103 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEE-EE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCcee-EE
Confidence 5789999886 77776 49999999999999887664 6778899999999 999999999999999999996654 66
Q ss_pred EeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEE
Q 019847 139 CIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKI 218 (335)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i 218 (335)
.+.+|...+.++.+ ++..+++++.++.+++|+.... ...+..+.+|...+..+.+++++..++ +++ .|+.|++
T Consensus 104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~--~d~~i~i 176 (318)
T 4ggc_A 104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA--EHHVATLSGHSQEVCGLRWAPDGRHLA-SGG--NDNLVNV 176 (318)
T ss_dssp EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS--SCEEEEEECCSSCEEEEEECTTSSEEE-EEE--TTSCEEE
T ss_pred EecCccceEEEeec--CCCEEEEEecCCceEeeecCCC--ceeEEEEcCccCceEEEEEcCCCCEEE-EEe--cCcceeE
Confidence 67889998887655 5679999999999999997764 345667788999999999999997555 444 7999999
Q ss_pred EECCCCceE-----EEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCC
Q 019847 219 WNVQKGTCI-----HGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDG 293 (335)
Q Consensus 219 ~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 293 (335)
||+++++.. ........+..+.++|.+..++.. .+++.++.|++||........... +...+..+.|+|++
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~---~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLAT---GGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHY 252 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEE---EECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTT
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEE---EecCCCCEEEEEeccccccccccc-ceeeeeeeeecccc
Confidence 999887532 222345679999999988776532 345789999999998888766544 55679999999999
Q ss_pred CEEEEEe--CCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 294 LTVATAG--ADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 294 ~~l~~~~--~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
..+++++ .|+.|++||+.+++....+.+|.+.|.++.++
T Consensus 253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 293 (318)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 8887764 79999999999998888888999999998875
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=1.4e-32 Score=233.49 Aligned_cols=300 Identities=11% Similarity=0.053 Sum_probs=230.1
Q ss_pred ccceeeeecCC--ceE-EEe----cCC----eEEEEEe--cCCceeeEEeecCCCCCceEEEEcC--------------C
Q 019847 17 YYSKVIDWGRN--NVL-AVA----LGP----VLFLWKW--ENGKVKKLLQVPGEDDYPTSVSWSH--------------D 69 (335)
Q Consensus 17 ~~~~~~~~~~~--~~~-~~~----~~~----~i~vw~~--~~~~~~~~~~~~~~~~~v~~~~~~~--------------~ 69 (335)
..+...+|... .++ +++ .+| .+++||+ .+++......+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 35666778763 334 444 367 8999999 8888665566778888888877765 2
Q ss_pred CCEEEEEECC------CcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCC---cEEEEecccCCeeeEEe
Q 019847 70 AKTLAVGYMD------SKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK---SIINHDVRVSNNVTSCI 140 (335)
Q Consensus 70 ~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~ 140 (335)
+..++.++.+ +.|++||+.. .....+..|...+.+++|+| +++.|++++.++ .|++||+++++. ..+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~--~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAV--RQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE--EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcE--EEe
Confidence 6677776654 7999999974 45677778999999999999 999999999875 999999987654 345
Q ss_pred ecCCCCEEEEEeecCCCEEE-EEeCCC--eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC--e
Q 019847 141 KAHSGEVCGLKWSNEGNLLA-SGGDDN--VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG--C 215 (335)
Q Consensus 141 ~~~~~~i~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~--~ 215 (335)
..|...+.+++|+|+|+.|+ +++.++ .|++||+++.. ...+..|...+.+++|+|+++.+++++. .++ .
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l~~~~~~~~~~~~spdg~~l~~~s~--~~g~~~ 292 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQVTDGRSNNTEPTWFPDSQNLAFTSD--QAGRPQ 292 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEECCCCSSCEEEEEECTTSSEEEEEEC--TTSSCE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeCcCCCCcccceEECCCCCEEEEEEC--CCCCcE
Confidence 67888999999999999888 566555 49999987642 3456678888999999999987777663 344 7
Q ss_pred EEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCE
Q 019847 216 IKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLT 295 (335)
Q Consensus 216 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 295 (335)
|++||+.+++..........+..++|+|+|++++.+.. ...+..|.+||+.+++.. .+..+. .+.+++|+|||++
T Consensus 293 i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~---~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~ 367 (415)
T 2hqs_A 293 VYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSS---NGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTM 367 (415)
T ss_dssp EEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEE---CSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSE
T ss_pred EEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEEC---cCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCE
Confidence 88889988875443344567889999999999987631 011468999999988774 455554 7899999999999
Q ss_pred EEEEeCCC---cEEEEecCCCCCCCCccccccccccceec
Q 019847 296 VATAGADE---TIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 296 l~~~~~dg---~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
|++++.|+ .|++||+.+. ....+..|...|.++.++
T Consensus 368 l~~~s~~~~~~~l~~~d~~g~-~~~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTDGR-FKARLPATDGQVKFPAWS 406 (415)
T ss_dssp EEEEEEETTEEEEEEEETTSC-CEEECCCSSSEEEEEEEC
T ss_pred EEEEEcCCCccEEEEEECCCC-cEEEeeCCCCCCcCCccc
Confidence 99998877 7999998754 344566777888888776
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.9e-32 Score=234.59 Aligned_cols=268 Identities=12% Similarity=0.083 Sum_probs=212.7
Q ss_pred eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe-----eecccccceeEeeecCC
Q 019847 37 VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR-----NLEGHHRRVATSSWNHW 111 (335)
Q Consensus 37 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~~~~ 111 (335)
.|..+|..++.......+..+ ..+.+++|+|++.++++++.++.|++||+.+++... .+..|...+.+++|++
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~- 179 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE- 179 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-
Confidence 444444444644444455444 456799999977777888888999999999998887 4557888999999988
Q ss_pred CCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE-eCCCeEEEEEccCCCcccceeeccCCCC
Q 019847 112 NGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG-GDDNVVRIWERSKMSSSKSLHRFTDHCG 190 (335)
Q Consensus 112 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 190 (335)
++.++++++.|+.|++||+++.+. ...+..|...+.+++|+|+++.++++ +.|+.|++||+++. +.+..+.. ..
T Consensus 180 ~~~~~~s~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~---~~~~~~~~-~~ 254 (433)
T 3bws_A 180 HNELWVSQMQANAVHVFDLKTLAY-KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK---LEIRKTDK-IG 254 (433)
T ss_dssp GTEEEEEEGGGTEEEEEETTTCCE-EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT---EEEEECCC-CS
T ss_pred CCEEEEEECCCCEEEEEECCCceE-EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC---cEEEEecC-CC
Confidence 899999999999999999986654 45566789999999999999988554 47999999998764 33444443 45
Q ss_pred CeeEEEecCCCCcEEEEecCC-----CCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEE
Q 019847 191 GVKALAWSPHQVNVLATGGGR-----EDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCL 265 (335)
Q Consensus 191 ~v~~~~~~~~~~~~~~~~~g~-----~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 265 (335)
.+.+++|+|+++.+++++.+. .|+.|++||+++++.+..+.....+..++|+|+++.++.. ++.++.|++
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~-----~~~~~~v~v 329 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS-----DMCCSKIEV 329 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE-----ETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE-----ecCCCEEEE
Confidence 689999999998777665211 3789999999999988888777788999999999866443 267999999
Q ss_pred EECCCCceeecccCCCCceeEeEEcCCCCEEEEEeC---------------CCcEEEEecCCCCCCC
Q 019847 266 WKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGA---------------DETIRFWEAFGPSGDE 317 (335)
Q Consensus 266 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------------dg~v~iw~~~~~~~~~ 317 (335)
||+.+++.+..+. +...+.+++|+|++++|++++. ||.|++||+...+...
T Consensus 330 ~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 330 YDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred EECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 9999998887775 5667999999999999988876 5799999998765443
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.6e-33 Score=235.77 Aligned_cols=230 Identities=10% Similarity=0.097 Sum_probs=172.4
Q ss_pred ceEEEecCCeEEEEEecCCceeeE---EeecCCCCCceEEEEcC--------CCCEEEEEECCCcEEEEeCCCceeEeee
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKL---LQVPGEDDYPTSVSWSH--------DAKTLAVGYMDSKLQLWDAETSKLVRNL 96 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~---~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 96 (335)
.+++++.|++|++||.++++.... ..+.+|.+.|++++|+| ++++||+|+.|++|+|||+.++..+..+
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 466777899999999998876433 23578999999999998 7899999999999999999998888888
Q ss_pred cccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeE------------------------EeecCCCCEEEEEe
Q 019847 97 EGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS------------------------CIKAHSGEVCGLKW 152 (335)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~------------------------~~~~~~~~i~~~~~ 152 (335)
..|...+.+++|+|.+.++|++++.|++|++||++++..... ...+|...+.++.|
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~ 262 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRW 262 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEE
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeee
Confidence 889999999999994456899999999999999986543211 12357788899998
Q ss_pred e-cCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCC-------------------eeEEEecCCCCcEEEEecCCC
Q 019847 153 S-NEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGG-------------------VKALAWSPHQVNVLATGGGRE 212 (335)
Q Consensus 153 ~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------------------v~~~~~~~~~~~~~~~~~g~~ 212 (335)
+ |+++.+++++.|+.+++||+....... .+..|... +..+.+.+.+..++++++ .
T Consensus 263 ~~~dg~~l~s~s~d~~i~vwd~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs--~ 337 (393)
T 4gq1_A 263 IGSDGSGILAMCKSGAWLRWNLFANNDYN---EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS--Q 337 (393)
T ss_dssp ETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET--T
T ss_pred ecCCCCEEEEEeCCCCEEEEECccCCCCc---eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC--C
Confidence 7 699999999999999999987643322 22222222 222333333445666665 8
Q ss_pred CCeEEEEECCCCceEEEe-ecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECC
Q 019847 213 DGCIKIWNVQKGTCIHGI-DAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYP 269 (335)
Q Consensus 213 d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~ 269 (335)
||.|++||+.+++..... .++.+|.+++|+|+|++|+++ + ++.+.+|.+.
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~a------s-~~Gv~lvrL~ 388 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA------T-EGSVLLTRLM 388 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEE------E-SSEEEEEEEG
T ss_pred CCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE------e-CCCeEEEEEe
Confidence 999999999998876654 456789999999999999987 3 5567676653
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.7e-30 Score=219.56 Aligned_cols=281 Identities=11% Similarity=0.095 Sum_probs=216.5
Q ss_pred cceeeeecCC-c-eEE-EecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCceeE
Q 019847 18 YSKVIDWGRN-N-VLA-VALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKLV 93 (335)
Q Consensus 18 ~~~~~~~~~~-~-~~~-~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~ 93 (335)
.+.+++|+++ . +++ ++.++.|++||+.+++....+. .+ ..+.+++|+|++++|++++ .++.|++||+.+++.+
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~ 109 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--AG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVA 109 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--CC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEE
Confidence 4678999885 3 434 4479999999999998765554 33 3899999999999886555 5699999999999988
Q ss_pred eeecccccceeEeeecCCCCCEE-EEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEE-EEEeCCCeEEEE
Q 019847 94 RNLEGHHRRVATSSWNHWNGHIL-TSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLL-ASGGDDNVVRIW 171 (335)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~iw 171 (335)
..+.. ...+.+++|+| +++.+ ++++.++.|++||+.+++. ...+.. ...+.+++|+|+++++ ++++.++.|++|
T Consensus 110 ~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~ 185 (391)
T 1l0q_A 110 GTVKT-GKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAV-INTVSV-GRSPKGIAVTPDGTKVYVANFDSMSISVI 185 (391)
T ss_dssp EEEEC-SSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEE-EEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEeC-CCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcE-EEEEec-CCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 88774 45789999999 77766 7888899999999986654 444444 4567999999999887 567788999999
Q ss_pred EccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeee
Q 019847 172 ERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 172 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (335)
|+++.. ....+. +...+.+++|+|++..+++++.+..++.|++||+++++.+..+..+..+.+++|+|+++.++.+
T Consensus 186 d~~~~~---~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 186 DTVTNS---VIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp ETTTTE---EEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEE
T ss_pred ECCCCe---EEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEE
Confidence 987643 333333 5567899999999987777652224899999999999999999888889999999999988433
Q ss_pred eeeeeecCCCeEEEEECCCCceeecccCCCCcee---EeE------------EcCCC----------CEEEEEeCCCcEE
Q 019847 252 HGFSASGDGNKLCLWKYPNMTKVGELQSSNSRIL---DLS------------QSPDG----------LTVATAGADETIR 306 (335)
Q Consensus 252 ~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~---~~~------------~~~~~----------~~l~~~~~dg~v~ 306 (335)
++.++.|++||+.+++.+..+..|..+.. .+. |+.+. ..+...+.|...+
T Consensus 262 -----~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (391)
T 1l0q_A 262 -----LSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEW 336 (391)
T ss_dssp -----ETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEE
T ss_pred -----cCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEE
Confidence 26799999999999998888776654321 112 22221 3456667789999
Q ss_pred EEecCCCC
Q 019847 307 FWEAFGPS 314 (335)
Q Consensus 307 iw~~~~~~ 314 (335)
+|++..+.
T Consensus 337 ~W~~~~g~ 344 (391)
T 1l0q_A 337 KWDFGDGS 344 (391)
T ss_dssp EEECSSSC
T ss_pred EEECCCCc
Confidence 99997764
No 127
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.98 E-value=4.6e-29 Score=205.99 Aligned_cols=273 Identities=9% Similarity=0.044 Sum_probs=204.6
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC-CCcEEEEeCCCcee-EeeecccccceeEe
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM-DSKLQLWDAETSKL-VRNLEGHHRRVATS 106 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~-~~~~~~~~~~v~~~ 106 (335)
+++.+.++.|.+||.++++....... +...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..+..+..++
T Consensus 13 ~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 89 (331)
T 3u4y_A 13 IVVEQHLRRISFFSTDTLEILNQITL--GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADV 89 (331)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEEC--CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCE
T ss_pred EEEecCCCeEEEEeCcccceeeeEEc--cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccce
Confidence 44455789999999999988666553 34556 9999999997777765 88999999999987 77777666666559
Q ss_pred eecCCCCCEEEEeeCCC---cEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE-eCCCe-EEEEEccCCCcccc
Q 019847 107 SWNHWNGHILTSGSKDK---SIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG-GDDNV-VRIWERSKMSSSKS 181 (335)
Q Consensus 107 ~~~~~~~~~l~~~~~dg---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~~~~~ 181 (335)
+|+| ++++++++..++ .|.+||+.+++. ...+. ......+++|+|++++++++ ..++. |.+|++........
T Consensus 90 ~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~-~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 90 DITP-DDQFAVTVTGLNHPFNMQSYSFLKNKF-ISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp EECT-TSSEEEECCCSSSSCEEEEEETTTTEE-EEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred EECC-CCCEEEEecCCCCcccEEEEECCCCCe-EEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 9999 899888666553 899999986654 44443 34567999999999865555 55578 99999875322111
Q ss_pred e-eeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce---EEEeecCCcEeEEEeCCCCceeeeeeeeeee
Q 019847 182 L-HRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC---IHGIDAKAQICGLEWNRHHKEILSGHGFSAS 257 (335)
Q Consensus 182 ~-~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (335)
. .........+..++|+|+++++++++. .++.|++||+.+++. +..+..+..+..++|+|+|+++++..
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~----- 239 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANL--IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLT----- 239 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEET--TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEEC-----
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeC--CCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEE-----
Confidence 1 111233456789999999988888775 789999999999988 88888888889999999999876542
Q ss_pred cCCCeEEEEECCCCce--eecccCC----CCc---eeEeEEcCCCCEEEEEe-CCCcEEEEecCCCC
Q 019847 258 GDGNKLCLWKYPNMTK--VGELQSS----NSR---ILDLSQSPDGLTVATAG-ADETIRFWEAFGPS 314 (335)
Q Consensus 258 ~~~~~i~i~d~~~~~~--~~~~~~~----~~~---i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~ 314 (335)
..++.|.+||..+++. +..+..+ ... ...++|+||+++|++++ .++.|.+||+..+.
T Consensus 240 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 240 ESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp SSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred cCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 4578899999998877 3332221 222 35589999999886655 46699999998754
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=1.5e-28 Score=203.75 Aligned_cols=274 Identities=11% Similarity=0.186 Sum_probs=196.3
Q ss_pred ceEEE-ecCCeEEEEEec-CCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC-CcEEEEeCC--Cce--eEeeecccc
Q 019847 28 NVLAV-ALGPVLFLWKWE-NGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD-SKLQLWDAE--TSK--LVRNLEGHH 100 (335)
Q Consensus 28 ~~~~~-~~~~~i~vw~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~--~~~--~~~~~~~~~ 100 (335)
.++++ +.++.|++|+++ +++...... ..+...+.+++|+|++++|++++.+ +.|.+|++. +++ .+..+..+
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred EEEEeCCCCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-
Confidence 34444 578999999996 344333333 3466788999999999999998876 999999997 554 33445433
Q ss_pred cceeEeeecCCCCCEEEEee-CCCcEEEEecccCC--eeeEEeecCCCCEEEEEeecCCCEEEEEe-CCCeEEEEEccCC
Q 019847 101 RRVATSSWNHWNGHILTSGS-KDKSIINHDVRVSN--NVTSCIKAHSGEVCGLKWSNEGNLLASGG-DDNVVRIWERSKM 176 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~ 176 (335)
..+..++|+| +++.|++++ .++.|.+||+..+. ....... ....+.+++|+|+++++++++ .++.|++||+...
T Consensus 84 ~~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 84 GSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp SCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CCCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 3889999999 888776655 58899999995221 2233333 345688999999999888887 8999999999762
Q ss_pred Cccccee--ecc-CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC--Cce--EEEee---c----CCcEeEEEeC
Q 019847 177 SSSKSLH--RFT-DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK--GTC--IHGID---A----KAQICGLEWN 242 (335)
Q Consensus 177 ~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~--~~~--~~~~~---~----~~~~~~~~~~ 242 (335)
....... ... .....+..++|+|+++++++++. .++.|.+||+.. ++. ...+. . ...+..++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~--~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE--LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 2222221 222 23456889999999988888775 789999999953 433 22222 1 1246689999
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEECC----CCceeecccCCCCceeEeEEcCCCCEEEEEe-CCCcEEEEecCCC
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKYP----NMTKVGELQSSNSRILDLSQSPDGLTVATAG-ADETIRFWEAFGP 313 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~ 313 (335)
|+++++++. ...++.|.+||+. +.+.+..+..+.. +..++|+|++++|++++ .++.|.+|+++..
T Consensus 240 ~dg~~l~v~-----~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~ 309 (343)
T 1ri6_A 240 PDGRHLYAC-----DRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGE 309 (343)
T ss_dssp TTSSEEEEE-----ETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETT
T ss_pred CCCCEEEEE-----ecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 999988654 2568999999998 2344555555544 88999999999888887 6899999977643
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.7e-28 Score=208.36 Aligned_cols=251 Identities=14% Similarity=0.067 Sum_probs=194.9
Q ss_pred CCceEEEecC------CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCC---cEEEEeCCCceeEeee
Q 019847 26 RNNVLAVALG------PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDS---KLQLWDAETSKLVRNL 96 (335)
Q Consensus 26 ~~~~~~~~~~------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~ 96 (335)
+.+++.++.+ +.|++||++.+.. ..+.+|...+.+++|+|+|++|++++.++ .|++||+.+++.. .+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~---~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ---FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC---EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC---EEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 3456666654 7999999986553 33446788999999999999999999875 9999999998775 46
Q ss_pred cccccceeEeeecCCCCCEEE-EeeCCCc--EEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC-CC--eEEE
Q 019847 97 EGHHRRVATSSWNHWNGHILT-SGSKDKS--IINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD-DN--VVRI 170 (335)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~~l~-~~~~dg~--i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-dg--~i~i 170 (335)
..+...+.+++|+| +++.|+ +++.++. |++||+.++.. ..+..|...+.+++|+|++++|++++. ++ .|++
T Consensus 219 ~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 219 ASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp ECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE--EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred ecCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE--EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 66788999999999 888776 6666665 99999986553 456678889999999999999998886 44 6778
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeee
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILS 250 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (335)
||+.... ...+..+...+.+++|+|+++.+++++....+..|++||+.+++.. .+..+..+.+++|+|+|+.++.
T Consensus 296 ~d~~~~~----~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 296 VNINGGA----PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIY 370 (415)
T ss_dssp EETTSSC----CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEE
T ss_pred EECCCCC----EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEE
Confidence 8877543 2334446677899999999987777664111358999999988774 4444458899999999999887
Q ss_pred eeeeeeecCCC--eEEEEECCCCceeecccCCCCceeEeEEcCCCC
Q 019847 251 GHGFSASGDGN--KLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL 294 (335)
Q Consensus 251 ~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 294 (335)
+. ..++ .|++||+. +.....+..|.+.|.+++|+|.-.
T Consensus 371 ~s-----~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 371 SS-----SQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EE-----EETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EE-----cCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 63 2222 89999986 555678889999999999999643
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2e-28 Score=214.12 Aligned_cols=291 Identities=11% Similarity=0.078 Sum_probs=220.9
Q ss_pred ceeeeecCC--ceEEEecCCeEEEEEe--cCCceeeEEeecCCCCCceEEEEcC----CCCEEEEEEC-CCcEEEEeCCC
Q 019847 19 SKVIDWGRN--NVLAVALGPVLFLWKW--ENGKVKKLLQVPGEDDYPTSVSWSH----DAKTLAVGYM-DSKLQLWDAET 89 (335)
Q Consensus 19 ~~~~~~~~~--~~~~~~~~~~i~vw~~--~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~i~iw~~~~ 89 (335)
+..++++++ .+++++.++.|.+||+ .+++....+. +...+..++|+| +|+++++++. +++|.+||..+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE---CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe---cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 556778774 5777888999999999 7777654443 345679999999 9999999884 89999999999
Q ss_pred ceeEeeeccc----------cc-ceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCE
Q 019847 90 SKLVRNLEGH----------HR-RVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNL 158 (335)
Q Consensus 90 ~~~~~~~~~~----------~~-~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 158 (335)
++++..+..+ .. .+..+.++|..+.++++...++.|.+||+.+.+.+......+...+..+.|+|++++
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE
Confidence 9998887642 22 688999999566677888889999999998765443223346677889999999998
Q ss_pred EEEEe-CCCeEEEEEccCCCcccceeecc----CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-------Cce
Q 019847 159 LASGG-DDNVVRIWERSKMSSSKSLHRFT----DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-------GTC 226 (335)
Q Consensus 159 l~~~~-~dg~i~iwd~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-------~~~ 226 (335)
|++++ .+++|.+||+.+++ .+..+. .|.+....+ ++|++..+++++. ..|++|.+||+.+ .++
T Consensus 338 l~va~~~~~~v~v~D~~tg~---l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~-~~d~~V~v~d~~~~~~~~~~~~~ 412 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDRR---LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH-LGDGSISLIGTDPKNHPQYAWKK 412 (543)
T ss_dssp EEEEEGGGTEEEEEETTTTE---EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSE
T ss_pred EEEEecCCCeEEEEECCCCe---EEEeeccCCCCCCCCCccc-CCCCCccEEEecc-CCCceEEEEEeCCCCCchhcCeE
Confidence 77655 58899999988754 333333 254433333 5787556777652 1479999999998 889
Q ss_pred EEEeecC-CcEeEEEeCCCCceeeeeeeeeeec---CCCeEEEEECCCCcee-ecc--------cCCCCceeEeEEcCCC
Q 019847 227 IHGIDAK-AQICGLEWNRHHKEILSGHGFSASG---DGNKLCLWKYPNMTKV-GEL--------QSSNSRILDLSQSPDG 293 (335)
Q Consensus 227 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~i~d~~~~~~~-~~~--------~~~~~~i~~~~~~~~~ 293 (335)
+++++.+ ..+..+.++|++++++++..+ +. .++.|.+||+.+++.. ..+ ..+...+..+.|+|+|
T Consensus 413 v~~l~~~g~~~~~v~~~pdg~~l~v~~~~--~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g 490 (543)
T 1nir_A 413 VAELQGQGGGSLFIKTHPKSSHLYVDTTF--NPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRG 490 (543)
T ss_dssp EEEEECSCSCCCCEECCTTCCEEEECCTT--CSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSS
T ss_pred EEEEEcCCCCceEEEcCCCCCcEEEecCC--CCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCC
Confidence 9999875 467889999999999886211 01 1679999999998876 332 3566789999999999
Q ss_pred CEEEEEe-----CCCcEEEEecCCCCCCCCc
Q 019847 294 LTVATAG-----ADETIRFWEAFGPSGDEDS 319 (335)
Q Consensus 294 ~~l~~~~-----~dg~v~iw~~~~~~~~~~~ 319 (335)
+.|+++. .|+.|.|||..+.+.....
T Consensus 491 ~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 491 DEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp SEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred CEEEEEeecCCCCCCeEEEEECCCceEEEee
Confidence 9998762 4799999999988765443
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=2e-28 Score=214.08 Aligned_cols=273 Identities=10% Similarity=0.102 Sum_probs=211.7
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC--CCceeEeeecccccceeEe
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA--ETSKLVRNLEGHHRRVATS 106 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~--~~~~~~~~~~~~~~~v~~~ 106 (335)
+++...++.|.+||..+++....+.. ++. +..++|+|+|++|++++.|+.|++||+ .+++.+..+. +...+..+
T Consensus 152 ~vs~~~d~~V~v~D~~t~~~~~~i~~-g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~v 227 (543)
T 1nir_A 152 SVTLRDAGQIALVDGDSKKIVKVIDT-GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSV 227 (543)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEEC-STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEE
T ss_pred EEEEcCCCeEEEEECCCceEEEEEec-Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceE
Confidence 44445789999999999988665543 333 889999999999999999999999999 8888888887 45678999
Q ss_pred eecCC---CCCEEEEee-CCCcEEEEecccCCeeeEEeec----------C-CCCEEEEEeecCCC-EEEEEeCCCeEEE
Q 019847 107 SWNHW---NGHILTSGS-KDKSIINHDVRVSNNVTSCIKA----------H-SGEVCGLKWSNEGN-LLASGGDDNVVRI 170 (335)
Q Consensus 107 ~~~~~---~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~----------~-~~~i~~~~~~~~~~-~l~~~~~dg~i~i 170 (335)
+|+|. +++++++++ .+++|.+||..+.+.+ ..+.. | ...+..+.++|++. ++++...++.|.+
T Consensus 228 a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~-~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~v 306 (543)
T 1nir_A 228 ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK-QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 306 (543)
T ss_dssp EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE-EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EeCCCcCCCCCEEEEEEccCCeEEEEeccccccc-eeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEE
Confidence 99972 566777766 5899999999876653 33332 2 23789999999665 5566677899999
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCC-----cEeEEEeCCC-
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKA-----QICGLEWNRH- 244 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~- 244 (335)
||+.+..... +..+ .+...+..+.|+|+++++++++. .+++|.+||+.+++++..++... ....+ ++|+
T Consensus 307 vd~~~~~~l~-~~~i-~~~~~~~~~~~spdg~~l~va~~--~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~ 381 (543)
T 1nir_A 307 VNYKDIDNLT-VTSI-GAAPFLHDGGWDSSHRYFMTAAN--NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKY 381 (543)
T ss_dssp EECTTSSSCE-EEEE-ECCSSCCCEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTT
T ss_pred EEecCCCcce-eEEe-ccCcCccCceECCCCCEEEEEec--CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCC
Confidence 9988654322 2233 24566888999999998888776 78999999999999988887421 12222 4677
Q ss_pred CceeeeeeeeeeecCCCeEEEEECCC-------CceeecccCCCCceeEeEEcCCCCEEEEEe-------CCCcEEEEec
Q 019847 245 HKEILSGHGFSASGDGNKLCLWKYPN-------MTKVGELQSSNSRILDLSQSPDGLTVATAG-------ADETIRFWEA 310 (335)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~v~iw~~ 310 (335)
+..++++. ..+++|.+||+.+ .+.++++..|...+..++++|++++|++++ .++.|.+||+
T Consensus 382 g~~~~s~~-----~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 382 GPVWSTSH-----LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp EEEEEEEB-----SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEET
T ss_pred ccEEEecc-----CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEEC
Confidence 44444431 2589999999998 889999999988889999999999999987 2779999999
Q ss_pred CCCCCC
Q 019847 311 FGPSGD 316 (335)
Q Consensus 311 ~~~~~~ 316 (335)
.+.+..
T Consensus 457 ~~~~~~ 462 (543)
T 1nir_A 457 KNLDAK 462 (543)
T ss_dssp TCTTSC
T ss_pred CCCCCC
Confidence 988765
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=7e-29 Score=201.31 Aligned_cols=261 Identities=13% Similarity=0.105 Sum_probs=196.1
Q ss_pred ecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC-ceeEeeeccc-ccceeEeeecC
Q 019847 33 ALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET-SKLVRNLEGH-HRRVATSSWNH 110 (335)
Q Consensus 33 ~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~-~~~v~~~~~~~ 110 (335)
+.++.|++||+.+++..... .|...|.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++|+|
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~---~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVW---QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEE---EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CcceeEEEEeCCCCceeeec---cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 36789999999998865433 4678899999999999999986 78999999999 8777766555 37889999999
Q ss_pred CCCCEEEEee--CCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEE-EEeCCCeEEEEEccCCCcccceeeccC
Q 019847 111 WNGHILTSGS--KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLA-SGGDDNVVRIWERSKMSSSKSLHRFTD 187 (335)
Q Consensus 111 ~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~ 187 (335)
+++.|++++ .++...+|.++........+..+ ..+..++|+|++++|+ ++..++.+++|+++... .....+..
T Consensus 95 -dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~--~~~~~~~~ 170 (297)
T 2ojh_A 95 -DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS--GVETRLTH 170 (297)
T ss_dssp -TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT--CCEEECCC
T ss_pred -CCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCC--CcceEccc
Confidence 999999988 44566666654332223333333 3589999999999887 77889999999975422 23445566
Q ss_pred CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC-CCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeee-----cCC
Q 019847 188 HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ-KGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSAS-----GDG 260 (335)
Q Consensus 188 ~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 260 (335)
+...+.+++|+|+++.+++++. .++.+++|++. .+.....+.. ...+..+.|+|++++++.+..-... ..+
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSS--RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred CCCccccceECCCCCEEEEEec--CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 7788999999999987777764 68889999875 4445555543 4578889999999998876320000 012
Q ss_pred CeEEEEECCCCce--eecccCCCCceeEeEEcCCCCEEEEEeCCC
Q 019847 261 NKLCLWKYPNMTK--VGELQSSNSRILDLSQSPDGLTVATAGADE 303 (335)
Q Consensus 261 ~~i~i~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 303 (335)
+.|.+||+.+++. +..+..|...+..++|+|++++|++++.|.
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 6799999988765 344447788899999999999998887654
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1.4e-28 Score=224.54 Aligned_cols=282 Identities=11% Similarity=0.069 Sum_probs=210.6
Q ss_pred cceeeeecCC--ceEEEec-CC-----eEEEEEecCCceeeEEeecCCC----------------------CCceEEEEc
Q 019847 18 YSKVIDWGRN--NVLAVAL-GP-----VLFLWKWENGKVKKLLQVPGED----------------------DYPTSVSWS 67 (335)
Q Consensus 18 ~~~~~~~~~~--~~~~~~~-~~-----~i~vw~~~~~~~~~~~~~~~~~----------------------~~v~~~~~~ 67 (335)
.+..++|+++ .+++++. ++ .|++||+.+++.........+. ..+.+++|+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4678999985 3555666 77 8999999999876665543333 337899999
Q ss_pred CCCCEEEEEECCCcEEEEeCCCce--eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCC
Q 019847 68 HDAKTLAVGYMDSKLQLWDAETSK--LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSG 145 (335)
Q Consensus 68 ~~~~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 145 (335)
|||++|++++. +.|++||+.+++ ....+..+...+..++|+| +++.|+.++ ++.|++||+.++.. ......+..
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~-~~~~~~~~~ 193 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQ-MQLTADGST 193 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEE-EECCCCCCS
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCE-EEeccCCcc
Confidence 99999999986 899999999873 4556677888899999999 999998887 46899999986543 333333333
Q ss_pred C----------------EEEEEeecCCCEEEEEeCCC---------------------------------eEEEEEccC-
Q 019847 146 E----------------VCGLKWSNEGNLLASGGDDN---------------------------------VVRIWERSK- 175 (335)
Q Consensus 146 ~----------------i~~~~~~~~~~~l~~~~~dg---------------------------------~i~iwd~~~- 175 (335)
. +..++|+|||++|++++.|+ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 47799999999999998776 788999876
Q ss_pred CCcccceeeccCCCCCeeEEEecCCCCcEEEEec--CCCCCeEEEEECCCCceEEEeecCC-----cEeEEEeCCCCcee
Q 019847 176 MSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGG--GREDGCIKIWNVQKGTCIHGIDAKA-----QICGLEWNRHHKEI 248 (335)
Q Consensus 176 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--g~~d~~i~i~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 248 (335)
... ..+.....|...+..++| |||+.+++... +..+..|++||+.+++....+..+. .+..+.|+|+|+.+
T Consensus 274 ~~~-~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 274 AQT-QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp CCC-EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred Cce-EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 432 112111246678999999 99987776642 2246789999999998877665433 35689999999966
Q ss_pred eeeeeeeeecCCCeEEEEECC-CCceeecccCCCCceeEe-EEcCCCCEEE-EEeCCC--cEEEEecCC
Q 019847 249 LSGHGFSASGDGNKLCLWKYP-NMTKVGELQSSNSRILDL-SQSPDGLTVA-TAGADE--TIRFWEAFG 312 (335)
Q Consensus 249 ~~~~~~~~~~~~~~i~i~d~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~l~-~~~~dg--~v~iw~~~~ 312 (335)
+++ +.++.+++|.+. +++ ...+..|...+..+ .|+|+++.|+ +++.++ .+++|++..
T Consensus 352 ~~~------~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 352 WSS------ERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEE------CTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred EEe------cCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 655 567877777665 344 67777888888887 5999998775 455555 899999875
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=5.7e-28 Score=219.86 Aligned_cols=283 Identities=11% Similarity=0.135 Sum_probs=202.4
Q ss_pred cceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCC---CceEEEEcCCCCEEEEEECC---------CcEEE
Q 019847 18 YSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDD---YPTSVSWSHDAKTLAVGYMD---------SKLQL 84 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------g~i~i 84 (335)
....++|+++ .+++.+.|+.|++||+.+++....+ ..|.. .|.+++|+|||++|++++.+ +.+.+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~--~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLI--EGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEE--CTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEe--ccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 3567899984 5666678999999999999865443 44544 48999999999999999764 78889
Q ss_pred EeCCCceeEeeec---ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCC---------------
Q 019847 85 WDAETSKLVRNLE---GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGE--------------- 146 (335)
Q Consensus 85 w~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~--------------- 146 (335)
||+.+++. ..+. .+...+..++|+| +++.|+.++. +.|++||+.++.. ......+...
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCC-EEEECCCBTTTEEEEECCHHHHHTT
T ss_pred EECCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCce-EEEecCCCCCceECcccceeEEEEe
Confidence 99998876 3333 3444589999999 9999998886 7999999986654 3333333332
Q ss_pred ---EEEEEeecCCCEEEEEeCCC----------------------------------eEEEEEccCCCcccceeeccC--
Q 019847 147 ---VCGLKWSNEGNLLASGGDDN----------------------------------VVRIWERSKMSSSKSLHRFTD-- 187 (335)
Q Consensus 147 ---i~~~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~~~~~~~~~-- 187 (335)
+.+++|+|||+.|++++.|+ .|++||+.+... ...+..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~ 248 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPD 248 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCC
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCc
Confidence 37899999999999987653 799999876542 222332
Q ss_pred ----CCCCeeEEEecCCCCcEEEEec-CCCCCeEEEEECCCCceEEEeecC--CcE----eEEEeCCCCceeeeeeeeee
Q 019847 188 ----HCGGVKALAWSPHQVNVLATGG-GREDGCIKIWNVQKGTCIHGIDAK--AQI----CGLEWNRHHKEILSGHGFSA 256 (335)
Q Consensus 188 ----~~~~v~~~~~~~~~~~~~~~~~-g~~d~~i~i~d~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~ 256 (335)
+...+..++|+|||+.+++... +..+..|++||+.+++....+... ..+ ..+.|+|+|+.++...
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~---- 324 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIR---- 324 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEE----
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEE----
Confidence 2567899999999976544432 113468999999999876655432 222 3789999999887531
Q ss_pred ecCCC------eEEEEE-CCCCce--eecccCCCCceeE-eEEcCCCCEEEEEeCC---CcEEEEecCCC
Q 019847 257 SGDGN------KLCLWK-YPNMTK--VGELQSSNSRILD-LSQSPDGLTVATAGAD---ETIRFWEAFGP 313 (335)
Q Consensus 257 ~~~~~------~i~i~d-~~~~~~--~~~~~~~~~~i~~-~~~~~~~~~l~~~~~d---g~v~iw~~~~~ 313 (335)
+..++ .|.+|| ..+++. ...+..+...+.. ++|+|||+.|+..+.+ +.+++|++...
T Consensus 325 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 325 AIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred ecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 24455 577777 344441 4555544444554 6999999999766555 78999998754
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.97 E-value=4.2e-27 Score=195.58 Aligned_cols=274 Identities=10% Similarity=0.108 Sum_probs=192.8
Q ss_pred CCeEEEEEec--CCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC---CCcEEEEeCCCce--eEeeecccccceeEee
Q 019847 35 GPVLFLWKWE--NGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM---DSKLQLWDAETSK--LVRNLEGHHRRVATSS 107 (335)
Q Consensus 35 ~~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~--~~~~~~~~~~~v~~~~ 107 (335)
++.|.+|+++ +++...... ..+...+..++|+|+|+ |++++. ++.|.+|++.+++ .+..+..+...+..++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~-~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGL-LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEE-EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCEEEEEEcCCCCeEEEeee-eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 4578888776 455443322 33456678899999999 555544 6899999997765 4444455677899999
Q ss_pred ecCCCCCEEEEee-CCCcEEEEecccCCeee--EEeec---------CCCCEEEEEeecCCCEEEEEeCCCeEEEEEccC
Q 019847 108 WNHWNGHILTSGS-KDKSIINHDVRVSNNVT--SCIKA---------HSGEVCGLKWSNEGNLLASGGDDNVVRIWERSK 175 (335)
Q Consensus 108 ~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~--~~~~~---------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 175 (335)
|+| +++.|++++ .++.+.+|++....... ..... +...+.+++|+|+++++++...++.|++|++..
T Consensus 93 ~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 93 VDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred ECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 999 888888777 78999999996433221 11211 123488999999999666666788999999983
Q ss_pred CCcccceeeccC-CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC--Cce--EEEeec-C------CcEeEEEeCC
Q 019847 176 MSSSKSLHRFTD-HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK--GTC--IHGIDA-K------AQICGLEWNR 243 (335)
Q Consensus 176 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~--~~~--~~~~~~-~------~~~~~~~~~~ 243 (335)
.........+.. ....+..++|+|+++.++++.. .++.+.+|++.. ++. +..+.. . ..+..++|+|
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp 249 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE--LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC--CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC
Confidence 222222222222 2335788999999987888765 789999999874 543 222221 1 3488899999
Q ss_pred CCceeeeeeeeeeecCCCeEEEEECCC---CceeecccCCCCceeEeEEcCCCCEEEEEeCC-CcEEEEecCCCCCCCC
Q 019847 244 HHKEILSGHGFSASGDGNKLCLWKYPN---MTKVGELQSSNSRILDLSQSPDGLTVATAGAD-ETIRFWEAFGPSGDED 318 (335)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~i~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-g~v~iw~~~~~~~~~~ 318 (335)
+|+++++.. ..++.|.+|++.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+|+++.......
T Consensus 250 dG~~l~v~~-----~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 250 DGHFLYVSN-----RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp TSCEEEEEE-----ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCEEEEEe-----CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999885442 4589999999873 34555666666678999999999988888764 8999997765444333
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=1.8e-26 Score=192.11 Aligned_cols=272 Identities=13% Similarity=0.113 Sum_probs=209.2
Q ss_pred cceeeeecCC--ceEEEec-------CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeC
Q 019847 18 YSKVIDWGRN--NVLAVAL-------GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDA 87 (335)
Q Consensus 18 ~~~~~~~~~~--~~~~~~~-------~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~ 87 (335)
.+..++++++ .+++++. ++.|.+||..+++....+.. ...+..++|+|++++++++. .++.|.+||.
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 3556778874 4555442 56899999999987766654 23478899999999666554 5799999999
Q ss_pred CCceeEeeeccccc---------ceeEeeecCCCCCEEEEee--CCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCC
Q 019847 88 ETSKLVRNLEGHHR---------RVATSSWNHWNGHILTSGS--KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEG 156 (335)
Q Consensus 88 ~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 156 (335)
.+++.+..+..+.. .+..+.|+| +++.+++++ .++.|.+||..+.+. ...+..+...+..++|+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKL-KTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEE-EEEECCCCTTCCCCEEETTT
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCce-EEEecCCCCccceEEECCCC
Confidence 99998887765432 278899999 777666665 478899999986554 44454455668889999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCcccceee-ccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCc
Q 019847 157 NLLASGGDDNVVRIWERSKMSSSKSLHR-FTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQ 235 (335)
Q Consensus 157 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~ 235 (335)
+++++++.++.|.+||+.+......+.. ..++...+..++|+|+++.++++.. .++.|.+||+.+++.+..+....+
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS--KAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES--SSSEEEEEETTTCCEEEEEECSSC
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC--CCCEEEEEECCCCcEEEEEEcCCC
Confidence 9999999999999999876543222221 1124556788999999988887765 679999999999999888876554
Q ss_pred EeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCC
Q 019847 236 ICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADE 303 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 303 (335)
..++|+|+++.++++ ...++.|.+||..+++.+..+.... .+.+++|+|+|++|+++..++
T Consensus 275 -~~~~~s~dg~~l~v~-----~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 275 -LAVLFNPARNEAYVT-----HRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp -CCEEEETTTTEEEEE-----ETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEECC
T ss_pred -ceEEECCCCCEEEEE-----ECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEccc
Confidence 679999999977654 2568999999999999888776544 679999999999887776654
No 137
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.5e-27 Score=191.10 Aligned_cols=186 Identities=13% Similarity=0.170 Sum_probs=141.0
Q ss_pred CCCCEEEEEE--CCCcEEEEeC-CCceeEeeecccccceeEeeecC--CCCCEEEEeeCCCcEEEEecccCCeeeEEeec
Q 019847 68 HDAKTLAVGY--MDSKLQLWDA-ETSKLVRNLEGHHRRVATSSWNH--WNGHILTSGSKDKSIINHDVRVSNNVTSCIKA 142 (335)
Q Consensus 68 ~~~~~l~~~~--~dg~i~iw~~-~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 142 (335)
++++++.+++ .|+.|++|++ .+++.+..+..|...+..++|++ .++..|++++.|++|++||+++++. ...+.+
T Consensus 143 ~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~-l~tL~g 221 (356)
T 2w18_A 143 TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL-LKKMHI 221 (356)
T ss_dssp TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE-EEEEEC
T ss_pred CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE-EEEEcC
Confidence 4555555543 5899999999 45888888888988888888887 3679999999999999999998775 444555
Q ss_pred CC---CCEEEEEeecCCCEE------------EEEeCCCeEEEEEccCCCcccceeec-----cCCCCCeeEEEecCCCC
Q 019847 143 HS---GEVCGLKWSNEGNLL------------ASGGDDNVVRIWERSKMSSSKSLHRF-----TDHCGGVKALAWSPHQV 202 (335)
Q Consensus 143 ~~---~~i~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~ 202 (335)
|. ..+.+++|+|++.++ ++|+.|++|++||..++. .+..+ .+|...+.+..++ +
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk---~l~v~~~~~p~Gh~~~~lsg~~s--g- 295 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL---SVGVMLYCLPPGQAGRFLEGDVK--D- 295 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE---EEEEEEECCCTTCCCCEEEEEEE--T-
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE---EEEEEEeeccCCCcceeEccccC--C-
Confidence 43 467788999999876 568889999999987643 23222 3565555444444 3
Q ss_pred cEEEEecCCCCCeEEEEECCCCceEEEeecCC-c-EeEEEeCCCCceeeeeeeeeeecCCCeEEEEEC
Q 019847 203 NVLATGGGREDGCIKIWNVQKGTCIHGIDAKA-Q-ICGLEWNRHHKEILSGHGFSASGDGNKLCLWKY 268 (335)
Q Consensus 203 ~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 268 (335)
.++++++ .|++|++||+++++++.+++.+. . +..++|+|+|+++++| +.|++|+|||+
T Consensus 296 ~~lASgS--~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG------S~D~TIklWd~ 355 (356)
T 2w18_A 296 HCAAAIL--TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG------QKDGNIFVYHY 355 (356)
T ss_dssp TEEEEEE--TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE------CTTSCEEEEEE
T ss_pred CEEEEEc--CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE------ECCCcEEEecC
Confidence 4677776 89999999999999999998553 3 4468999999999988 78999999995
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=1e-26 Score=192.23 Aligned_cols=270 Identities=13% Similarity=0.101 Sum_probs=203.2
Q ss_pred ceEEEecCCeEEEEEecCCceeeEEeecCCCC-CceEEEEcCCCCEEEEE-ECCCcEEEEeCCCceeEeeeccc-----c
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKLLQVPGEDD-YPTSVSWSHDAKTLAVG-YMDSKLQLWDAETSKLVRNLEGH-----H 100 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~-----~ 100 (335)
.+++++.++.|.+||..+++....+.... .. .+..++|+|++++++++ ..++.|.+||+.+++.+..+... .
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIAD-AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTT-CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCC-CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 46777889999999999998766655432 21 47889999999876554 55789999999999888766532 2
Q ss_pred cceeEeeecCCCCCEEEEee------------CCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeE
Q 019847 101 RRVATSSWNHWNGHILTSGS------------KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVV 168 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~------------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 168 (335)
..+..++|+| +++.++++. .++.|.+||+.+.+. ...+.. ...+.+++|+|++++|+++ ++.|
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-RKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE-EEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcE-EEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 3678899999 888888876 579999999986544 333332 4567889999999988887 6889
Q ss_pred EEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC-----------------------eEEEEECCCCc
Q 019847 169 RIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG-----------------------CIKIWNVQKGT 225 (335)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~-----------------------~i~i~d~~~~~ 225 (335)
++||+.+.. ....+..+.. ...+.|+|++..+++++. .++ .|.+||+.+++
T Consensus 157 ~~~d~~~~~---~~~~~~~~~~-~~~~~~s~dg~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 157 HVMDPEAGT---LVEDKPIQSW-EAETYAQPDVLAVWNQHE--SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp EEEETTTTE---EEEEECSTTT-TTTTBCCCBCCCCCCCCT--TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred EEEECCCCc---Eeeeeecccc-CCCceeCCCccEEeeecc--CCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 999987643 2333332220 112378999987766543 333 47899999988
Q ss_pred eEEEee---cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCC
Q 019847 226 CIHGID---AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGAD 302 (335)
Q Consensus 226 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 302 (335)
.. .+. ....+..++|+|++++++++ ++.|.+||+.+++.+..+..+ ..+.+++|+|++++|++++.+
T Consensus 231 ~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 231 MA-MREVRIMDVFYFSTAVNPAKTRAFGA--------YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp EE-EEEEEECSSCEEEEEECTTSSEEEEE--------ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBS
T ss_pred ce-EeecCCCCCceeeEEECCCCCEEEEe--------CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCC
Confidence 75 332 23467889999999998875 699999999999888777644 457899999999999999999
Q ss_pred CcEEEEecCCCCCCCCc
Q 019847 303 ETIRFWEAFGPSGDEDS 319 (335)
Q Consensus 303 g~v~iw~~~~~~~~~~~ 319 (335)
+.|++||+.+.+.....
T Consensus 301 ~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 301 GDLAAYDAETLEKKGQV 317 (337)
T ss_dssp SEEEEEETTTCCEEEEE
T ss_pred CcEEEEECcCCcEEEEE
Confidence 99999999887654433
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=5.7e-27 Score=212.74 Aligned_cols=282 Identities=12% Similarity=0.104 Sum_probs=207.5
Q ss_pred ccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC-----ce
Q 019847 17 YYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET-----SK 91 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-----~~ 91 (335)
..+.+++|+++..++.+.++.|++||+.+++.... ..+...+.+++|+|||++|+++ .++.|++||+.+ ++
T Consensus 82 ~~v~~~~~spd~~~~~~~~~~i~~~d~~~~~~~~l---~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLFTQGGLVGFDMLARKVTYL---FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTTTEEEEEETTEEEEEETTTTEEEEE---ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCCCeEEEEECCEEEEEECCCCceEEc---cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 46888999998777777889999999998875443 3456678899999999999996 689999999998 77
Q ss_pred eEeeecccccc--------------eeEeeecCCCCCEEEEee---------------------------------CCCc
Q 019847 92 LVRNLEGHHRR--------------VATSSWNHWNGHILTSGS---------------------------------KDKS 124 (335)
Q Consensus 92 ~~~~~~~~~~~--------------v~~~~~~~~~~~~l~~~~---------------------------------~dg~ 124 (335)
.......+... +.++.|+| +++.|++++ .+..
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 66555444333 48999999 999999887 4468
Q ss_pred EEEEecccCCeeeEEe-ecCCCCEEEEEeecCCCEEEEEeCCC-----eEEEEEccCCCcccceeeccCCC---CCeeEE
Q 019847 125 IINHDVRVSNNVTSCI-KAHSGEVCGLKWSNEGNLLASGGDDN-----VVRIWERSKMSSSKSLHRFTDHC---GGVKAL 195 (335)
Q Consensus 125 i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~---~~v~~~ 195 (335)
|++||+.++....... ..|...+.+++|+||+++|++++.++ .|++||+.++.....+... .+. ..+..+
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~ 315 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE-TDKHYVEPLHPL 315 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE-ECSSCCCCCSCC
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc-cCCCeECccCCc
Confidence 9999998655322111 24667899999999999999988776 8999998875222222211 122 234678
Q ss_pred EecC--CCCcEEEEecCCCCCeEEEEECC-CCceEEEeecC-CcEeE-EEeCCCCceeeeeeeeeeecCCC----eEEEE
Q 019847 196 AWSP--HQVNVLATGGGREDGCIKIWNVQ-KGTCIHGIDAK-AQICG-LEWNRHHKEILSGHGFSASGDGN----KLCLW 266 (335)
Q Consensus 196 ~~~~--~~~~~~~~~~g~~d~~i~i~d~~-~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----~i~i~ 266 (335)
.|+| +++ +++++. .|+.+++|++. ++..+..+..+ ..+.. ++|+|+++.++... ..++ .|..|
T Consensus 316 ~~sp~~dg~-~l~~~~--~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~-----~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 316 TFLPGSNNQ-FIWQSR--RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFES-----TEASPLERHFYCI 387 (706)
T ss_dssp EECTTCSSE-EEEEEC--TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEE-----SSSCTTCBEEEEE
T ss_pred eeecCCCCE-EEEEEc--cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEe-----cCCCCceEEEEEE
Confidence 9999 986 555554 78888898876 56666666543 45665 79999999886542 3343 77778
Q ss_pred ECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCC----CcEEEEecCCCC
Q 019847 267 KYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGAD----ETIRFWEAFGPS 314 (335)
Q Consensus 267 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~~ 314 (335)
|..+++. ..+. |...+.+++|+|||++|+....+ +.|++||+.+++
T Consensus 388 d~~~~~~-~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 388 DIKGGKT-KDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ETTCCCC-EESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EcCCCCc-eecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 8877653 3333 56678999999999988876543 569999998765
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=1.1e-26 Score=210.87 Aligned_cols=293 Identities=12% Similarity=0.118 Sum_probs=200.7
Q ss_pred ceeeeecCCceEEEecCCeEEEEEecCCce--eeEEeecC--------------CCCCceEEEEcCCCCEEEEEECCCcE
Q 019847 19 SKVIDWGRNNVLAVALGPVLFLWKWENGKV--KKLLQVPG--------------EDDYPTSVSWSHDAKTLAVGYMDSKL 82 (335)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~--~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~dg~i 82 (335)
+..+.|.++.++..+.++ | +||+.+++. ........ +...|.+++|+|+ ++++.+. ++.|
T Consensus 28 ~~~~~w~g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~~i 103 (706)
T 2z3z_A 28 VVGLQWMGDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QGGL 103 (706)
T ss_dssp CTTCEEETTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TTEE
T ss_pred CCCCcCcCCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CCEE
Confidence 344777766677777776 8 999999986 44333211 1156999999999 6666664 6999
Q ss_pred EEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEeccc-----CCeeeEEeecCCCC-----------
Q 019847 83 QLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRV-----SNNVTSCIKAHSGE----------- 146 (335)
Q Consensus 83 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-----~~~~~~~~~~~~~~----------- 146 (335)
++||+.+++.... ..+...+.+++|+| +++.|+++ .++.|++||+.+ ++. ......+...
T Consensus 104 ~~~d~~~~~~~~l-~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~-~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 104 VGFDMLARKVTYL-FDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRA-IAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp EEEETTTTEEEEE-ECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCC-EESCSCCBTTEEESSCCGGGC
T ss_pred EEEECCCCceEEc-cCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCc-EEeccCCCCCeEcccchhhhh
Confidence 9999998876544 44667899999999 99988885 689999999986 443 3333333332
Q ss_pred ---EEEEEeecCCCEEEEEe---------------------------------CCCeEEEEEccCCCcccceeeccCCCC
Q 019847 147 ---VCGLKWSNEGNLLASGG---------------------------------DDNVVRIWERSKMSSSKSLHRFTDHCG 190 (335)
Q Consensus 147 ---i~~~~~~~~~~~l~~~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 190 (335)
+.+++|+|||++|++++ .+..|++||+.++.. ..+.....+..
T Consensus 180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~ 258 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT-VYLQTGEPKEK 258 (706)
T ss_dssp TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE-EECCCCSCTTC
T ss_pred cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce-EeeccCCCCce
Confidence 47899999999999987 446799999876432 11222224667
Q ss_pred CeeEEEecCCCCcEEEEecCCCCC-----eEEEEECCCCceEEEee-c--CC---cEeEEEeCC--CCceeeeeeeeeee
Q 019847 191 GVKALAWSPHQVNVLATGGGREDG-----CIKIWNVQKGTCIHGID-A--KA---QICGLEWNR--HHKEILSGHGFSAS 257 (335)
Q Consensus 191 ~v~~~~~~~~~~~~~~~~~g~~d~-----~i~i~d~~~~~~~~~~~-~--~~---~~~~~~~~~--~~~~~~~~~~~~~~ 257 (335)
.+..++|+|+++.++++. .++ .|++||+.+++....+. . .. .+..+.|+| +|++++++
T Consensus 259 ~~~~~~~spdg~~l~~~~---~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~------ 329 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAE---VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQS------ 329 (706)
T ss_dssp EEEEEEECTTSSEEEEEE---ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEE------
T ss_pred eEeeEEEECCCCEEEEEE---eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEE------
Confidence 799999999998777655 343 89999999984333332 1 11 246789999 99977765
Q ss_pred cCCCeEEEEECC-CCceeecccCCCCceeE-eEEcCCCCEEEEEeC-CC----cEEEEecCCCCCCCCccccccccccce
Q 019847 258 GDGNKLCLWKYP-NMTKVGELQSSNSRILD-LSQSPDGLTVATAGA-DE----TIRFWEAFGPSGDEDSVSHLAGLVSLK 330 (335)
Q Consensus 258 ~~~~~i~i~d~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~-dg----~v~iw~~~~~~~~~~~~~~~~~i~~~~ 330 (335)
..++.+++|++. ++..+..+..+...+.. ++|+|+++.|+.++. ++ .|..|++.++. .....+...+.++.
T Consensus 330 ~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~ 407 (706)
T 2z3z_A 330 RRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK--TKDLTPESGMHRTQ 407 (706)
T ss_dssp CTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC--CEESCCSSSEEEEE
T ss_pred ccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC--ceeccCCCceEEEE
Confidence 567888888876 66777778788777877 799999988766554 44 45555655543 22333444455444
Q ss_pred e
Q 019847 331 T 331 (335)
Q Consensus 331 ~ 331 (335)
+
T Consensus 408 ~ 408 (706)
T 2z3z_A 408 L 408 (706)
T ss_dssp E
T ss_pred E
Confidence 4
No 141
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.95 E-value=5.8e-25 Score=183.67 Aligned_cols=269 Identities=13% Similarity=0.143 Sum_probs=186.8
Q ss_pred cCCeEEEEEec--CCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC----CcEEEEeCCC--cee--Eeeecccccce
Q 019847 34 LGPVLFLWKWE--NGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD----SKLQLWDAET--SKL--VRNLEGHHRRV 103 (335)
Q Consensus 34 ~~~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iw~~~~--~~~--~~~~~~~~~~v 103 (335)
.++.|++|+++ +++....... +...+..++|+|+|++|++++.+ +.|.+|++.. ++. +.....+....
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p 102 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADP 102 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCE
T ss_pred CCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCc
Confidence 35689999874 5666555444 66778899999999999999875 7999998865 433 33333345566
Q ss_pred eEeeecCCCCCEEEEee-CCCcEEEEecccCCeeeEE---ee----------cCCCCEEEEEeecCCCEEEEEe-CCCeE
Q 019847 104 ATSSWNHWNGHILTSGS-KDKSIINHDVRVSNNVTSC---IK----------AHSGEVCGLKWSNEGNLLASGG-DDNVV 168 (335)
Q Consensus 104 ~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~---~~----------~~~~~i~~~~~~~~~~~l~~~~-~dg~i 168 (335)
..+++ +++.|++++ .++.+.+|++.....+... .. .+...+.+++|+|+++++++++ .++.|
T Consensus 103 ~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 103 CYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp EEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 77777 555555554 6889999999754432111 11 1123468899999999776655 47899
Q ss_pred EEEEccCCCc------ccc----eeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce--EEEeec----
Q 019847 169 RIWERSKMSS------SKS----LHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC--IHGIDA---- 232 (335)
Q Consensus 169 ~iwd~~~~~~------~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~--~~~~~~---- 232 (335)
++|++..... ... ......+...+..++|+|+++.++++.. .++.|.+||+.+++. +..+..
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~ 257 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE--IGGTVIAFRYADGMLDEIQTVAADTVN 257 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET--TTCEEEEEEEETTEEEEEEEEESCSSC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC--CCCeEEEEEecCCceEEeEEEecCCCC
Confidence 9999875432 111 1112234456789999999988877765 689999999987754 222322
Q ss_pred CCcEeEEEeCCCCceeeeeeeeeeecC-CCeEEEEECC--CCc--eeecccCCCCceeEeEEcCCCCEEEEEe-CCCcEE
Q 019847 233 KAQICGLEWNRHHKEILSGHGFSASGD-GNKLCLWKYP--NMT--KVGELQSSNSRILDLSQSPDGLTVATAG-ADETIR 306 (335)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~i~d~~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~ 306 (335)
......++|+|+|++++++. .. ++.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.
T Consensus 258 ~~~~~~i~~spdg~~l~v~~-----~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASN-----RLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQ 331 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEE-----CSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEE
T ss_pred CCCcccEEECCCCCEEEEEC-----CCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEE
Confidence 13467999999999886652 34 6899999985 344 3444444 45678999999999988887 678999
Q ss_pred EEecCCCCC
Q 019847 307 FWEAFGPSG 315 (335)
Q Consensus 307 iw~~~~~~~ 315 (335)
+|+++....
T Consensus 332 v~~~d~~~g 340 (361)
T 3scy_A 332 IFERDQATG 340 (361)
T ss_dssp EEEECTTTC
T ss_pred EEEEECCCC
Confidence 987764433
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=3.8e-25 Score=183.26 Aligned_cols=266 Identities=9% Similarity=0.088 Sum_probs=186.5
Q ss_pred ccceeeeecCC--ceEEEecC-CeEEEEEec--CCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC-CCcEEEEeCC--
Q 019847 17 YYSKVIDWGRN--NVLAVALG-PVLFLWKWE--NGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM-DSKLQLWDAE-- 88 (335)
Q Consensus 17 ~~~~~~~~~~~--~~~~~~~~-~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~-- 88 (335)
..+.+++|+++ .+++++.+ +.|.+|+++ +++......+..+. .+..++|+|++++|++++. ++.|.+||+.
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 45667888874 36666655 899999998 66665555554444 7899999999998877765 8889999994
Q ss_pred -CceeEeeecccccceeEeeecCCCCCEEEEee-CCCcEEEEecccCCeeeE----Eee-cCCCCEEEEEeecCCCEEEE
Q 019847 89 -TSKLVRNLEGHHRRVATSSWNHWNGHILTSGS-KDKSIINHDVRVSNNVTS----CIK-AHSGEVCGLKWSNEGNLLAS 161 (335)
Q Consensus 89 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~----~~~-~~~~~i~~~~~~~~~~~l~~ 161 (335)
+.+....+.. ...+.+++|+| +++.+++++ .++.|.+||+.+...... ... .....+..++|+|+++++++
T Consensus 117 ~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~ 194 (343)
T 1ri6_A 117 LPVGVVDVVEG-LDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYC 194 (343)
T ss_dssp EEEEEEEEECC-CTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEE
T ss_pred ccccccccccC-CCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEE
Confidence 4445555543 34688999999 888777776 899999999986333221 122 23457889999999997765
Q ss_pred Ee-CCCeEEEEEccCCC-cccceeec---cCC---CCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC--C--CceEEE
Q 019847 162 GG-DDNVVRIWERSKMS-SSKSLHRF---TDH---CGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ--K--GTCIHG 229 (335)
Q Consensus 162 ~~-~dg~i~iwd~~~~~-~~~~~~~~---~~~---~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~--~--~~~~~~ 229 (335)
++ .++.|.+||++... ........ ... ...+..++|+|+++.++++.. .++.|.+||+. + .+.+..
T Consensus 195 ~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 195 VNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp EETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEE
T ss_pred EeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec--CCCEEEEEEEcCCCCceEEeee
Confidence 55 78999999986421 11112221 111 235668999999988887775 78999999998 2 345555
Q ss_pred eecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEEC--CCCc--eeecccCCCCceeEeEEcCCC
Q 019847 230 IDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKY--PNMT--KVGELQSSNSRILDLSQSPDG 293 (335)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~--~~~~--~~~~~~~~~~~i~~~~~~~~~ 293 (335)
+.....+..++|+|++++++++. ..++.+.+|++ .+++ .+..+... ....+++|.|+.
T Consensus 273 ~~~~~~~~~~~~s~dg~~l~~~~-----~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~ 334 (343)
T 1ri6_A 273 QPTETQPRGFNVDHSGKYLIAAG-----QKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHE 334 (343)
T ss_dssp EECSSSCCCEEECTTSSEEEEEC-----TTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC
T ss_pred ecCCCccceEEECCCCCEEEEec-----CCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEccc
Confidence 66556688999999999887662 46899999954 4553 33344332 345667777654
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=1.8e-25 Score=204.04 Aligned_cols=243 Identities=9% Similarity=0.045 Sum_probs=187.4
Q ss_pred CCCceEEEEcCCCCEEEEEEC-CC-----cEEEEeCCCceeEeeeccccc------------------------ceeEee
Q 019847 58 DDYPTSVSWSHDAKTLAVGYM-DS-----KLQLWDAETSKLVRNLEGHHR------------------------RVATSS 107 (335)
Q Consensus 58 ~~~v~~~~~~~~~~~l~~~~~-dg-----~i~iw~~~~~~~~~~~~~~~~------------------------~v~~~~ 107 (335)
...+.+++|+|||++|++++. |+ .|++||+.+++....+..+.. .+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999998 88 899999999987766654432 388999
Q ss_pred ecCCCCCEEEEeeCCCcEEEEecccCC--eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeec
Q 019847 108 WNHWNGHILTSGSKDKSIINHDVRVSN--NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRF 185 (335)
Q Consensus 108 ~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 185 (335)
|+| +++.|++++. +.|++||+.++. . ...+..+...+..++|+|||++|++++ ++.|++||+..+. .....
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~-~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~---~~~~~ 188 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGKAA-VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGR---QMQLT 188 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCSTTS-CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTE---EEECC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCcce-EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCC---EEEec
Confidence 999 9999998886 999999998662 2 334556778899999999999999988 5699999987643 22222
Q ss_pred cCCCCC----------------eeEEEecCCCCcEEEEecCCCCC---------------------------------eE
Q 019847 186 TDHCGG----------------VKALAWSPHQVNVLATGGGREDG---------------------------------CI 216 (335)
Q Consensus 186 ~~~~~~----------------v~~~~~~~~~~~~~~~~~g~~d~---------------------------------~i 216 (335)
..+... +..+.|+|||+.++++.. |+ .|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~---d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI---DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE---ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEE---cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 222221 478999999988877653 33 78
Q ss_pred EEEECCC-CceEEEee---cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCC----ceeEeE
Q 019847 217 KIWNVQK-GTCIHGID---AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNS----RILDLS 288 (335)
Q Consensus 217 ~i~d~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~----~i~~~~ 288 (335)
++||+.+ ++...... +...+..++| |+|+.++.... .....+..|++||+.+++....+..+.. .+..++
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~-~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ-SRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE-ETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEe-cccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 9999988 77654432 3457889999 99999986531 1123467899999999987766655543 456899
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCC
Q 019847 289 QSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 289 ~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
|+|||+++++++.||.+++|.+..
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECS
T ss_pred ECCCCeEEEEecCCCccEEEEEcC
Confidence 999999999999999888888763
No 144
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.95 E-value=7.7e-24 Score=177.03 Aligned_cols=276 Identities=10% Similarity=0.053 Sum_probs=190.6
Q ss_pred eEEEec--CCeEEEEEec--CCceeeEEeec-CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCC-CceeEeeeccc-cc
Q 019847 29 VLAVAL--GPVLFLWKWE--NGKVKKLLQVP-GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE-TSKLVRNLEGH-HR 101 (335)
Q Consensus 29 ~~~~~~--~~~i~vw~~~--~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~-~~ 101 (335)
+++++. ++.|.+|+++ ++++....... .....+..++|+|+|++|++++.+ .|.+|++. +++........ .+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 455553 2578888764 56654433322 234568899999999999999887 99999997 77765433211 13
Q ss_pred ceeEeeecCCCCCE--EEEee-------------CCCcEEEEecccCCeeeEEee----cCCCCEEEEEeecCCCEEEEE
Q 019847 102 RVATSSWNHWNGHI--LTSGS-------------KDKSIINHDVRVSNNVTSCIK----AHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 102 ~v~~~~~~~~~~~~--l~~~~-------------~dg~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~ 162 (335)
.+..++|+| +++. ++++. .+|.+.+|++.....+...+. .+...+.+++|+|+|++++++
T Consensus 84 ~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 84 HPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 466799999 8884 55553 689999999974333332222 255679999999999988877
Q ss_pred eC-CCeEEEEEcc-CCCcccceeecc--CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC--CCceE---EEee--
Q 019847 163 GD-DNVVRIWERS-KMSSSKSLHRFT--DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ--KGTCI---HGID-- 231 (335)
Q Consensus 163 ~~-dg~i~iwd~~-~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~--~~~~~---~~~~-- 231 (335)
+. ++.|++||+. ++.. ..+..+. .+...+..++|+|+++.++++.. .++.|.+|++. +++.. ..+.
T Consensus 163 ~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~--~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALME--AGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp ETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEET--TTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred cCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEEC--CCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 64 6799999987 4321 2222232 23566899999999988777764 57899999765 56543 1222
Q ss_pred -cC----C-------cEeEEE-eCCCCceeeeeeeeeeecCC----CeEEEEECC-CCceee---cccCCCCceeEeEEc
Q 019847 232 -AK----A-------QICGLE-WNRHHKEILSGHGFSASGDG----NKLCLWKYP-NMTKVG---ELQSSNSRILDLSQS 290 (335)
Q Consensus 232 -~~----~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~i~i~d~~-~~~~~~---~~~~~~~~i~~~~~~ 290 (335)
.. . .+..++ |+|+|++++++.. +.+ +.|.+|++. +++... ....+...+..++|+
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~----~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~s 315 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR----ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVS 315 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE----ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEE
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECC----CCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceec
Confidence 11 2 478899 9999998876532 222 289999986 555433 233345557789999
Q ss_pred C---CCCEEEEEeCC-CcEEEEecCCC
Q 019847 291 P---DGLTVATAGAD-ETIRFWEAFGP 313 (335)
Q Consensus 291 ~---~~~~l~~~~~d-g~v~iw~~~~~ 313 (335)
| ||++|++++.+ +.|.+|+++..
T Consensus 316 p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 316 PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9 89999999865 89999999865
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=1.8e-25 Score=181.16 Aligned_cols=243 Identities=14% Similarity=0.146 Sum_probs=179.8
Q ss_pred EECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEeccc-CCeeeEEeecC-CCCEEEEEee
Q 019847 76 GYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRV-SNNVTSCIKAH-SGEVCGLKWS 153 (335)
Q Consensus 76 ~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~-~~~i~~~~~~ 153 (335)
++.++.|++||+.+++... +..|...+.+++|+| ++++|++++ ++.|++||+.+ +.. ......+ ...+.+++|+
T Consensus 18 ~~~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSP-EKVDTGFATICNNDHGIS 93 (297)
T ss_dssp CCCCEEEEEEETTTTEEEE-EEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSC-EECCCTTCCCBCSCCEEC
T ss_pred CCcceeEEEEeCCCCceee-eccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCc-eEeccccccccccceEEC
Confidence 3568899999999888664 455889999999999 999998876 78999999987 543 4444444 4678899999
Q ss_pred cCCCEEEEEe--CCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEEC--CCCceEEE
Q 019847 154 NEGNLLASGG--DDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNV--QKGTCIHG 229 (335)
Q Consensus 154 ~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~--~~~~~~~~ 229 (335)
|++++|++++ .++...+|.++.... ....+..+ ..+..++|+|+++.+++++. .++.+++|++ .+++....
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~-~~~~~~~~spdg~~l~~~~~--~~~~~~l~~~~~~~~~~~~~ 168 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGG--TPRLMTKN-LPSYWHGWSPDGKSFTYCGI--RDQVFDIYSMDIDSGVETRL 168 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCC--CCEECCSS-SSEEEEEECTTSSEEEEEEE--ETTEEEEEEEETTTCCEEEC
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCC--ceEEeecC-CCccceEECCCCCEEEEEEC--CCCceEEEEEECCCCcceEc
Confidence 9999999998 334556665542211 12333323 34889999999988886665 7898899885 44555444
Q ss_pred eecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECC-CCceeecccCCCCceeEeEEcCCCCEEEEEeCC------
Q 019847 230 IDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYP-NMTKVGELQSSNSRILDLSQSPDGLTVATAGAD------ 302 (335)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------ 302 (335)
......+.++.|+|+++.++.+. ..++.+++|++. .+..+..+..|...+..++|+|++++|++++.+
T Consensus 169 ~~~~~~~~~~~~s~dg~~l~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 169 THGEGRNDGPDYSPDGRWIYFNS-----SRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp CCSSSCEEEEEECTTSSEEEEEE-----CTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred ccCCCccccceECCCCCEEEEEe-----cCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 44566899999999999887652 457889999886 556667777888889999999999999988876
Q ss_pred -----CcEEEEecCCCCCCCCc--cccccccccceec
Q 019847 303 -----ETIRFWEAFGPSGDEDS--VSHLAGLVSLKTS 332 (335)
Q Consensus 303 -----g~v~iw~~~~~~~~~~~--~~~~~~i~~~~~~ 332 (335)
+.|++||+.+++..... ..|...+..+.++
T Consensus 244 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 280 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWS 280 (297)
T ss_dssp CSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBC
T ss_pred cccCceEEEEEecCCCCceeeeccCCCCcccccceEC
Confidence 56999999876543222 2455566665554
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=1.4e-24 Score=204.59 Aligned_cols=298 Identities=10% Similarity=0.067 Sum_probs=213.2
Q ss_pred cccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC------CcEEEEeCCC
Q 019847 16 DYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD------SKLQLWDAET 89 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iw~~~~ 89 (335)
...+...+|+++.++. ..++.|++|++.+++.. .+..|...+.+++|||||++||+++.+ ..|++|++.+
T Consensus 14 ~~~~~~~~~S~~~iaf-~~~~~l~~~~~~gg~~~---~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~ 89 (1045)
T 1k32_A 14 PNLLLNPDIHGDRIIF-VCCDDLWEHDLKSGSTR---KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGEN 89 (1045)
T ss_dssp CCCCEEEEEETTEEEE-EETTEEEEEETTTCCEE---EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTT
T ss_pred cceEeCcEEeCCEEEE-EECCcEEEEECCCCcEE---EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCC
Confidence 3456778888765554 44579999999988753 345788999999999999999988643 3799999988
Q ss_pred ceeEeeecccccce-------eEeeecCCCCCEEEEeeCC------CcEEEEecccCCee--------------------
Q 019847 90 SKLVRNLEGHHRRV-------ATSSWNHWNGHILTSGSKD------KSIINHDVRVSNNV-------------------- 136 (335)
Q Consensus 90 ~~~~~~~~~~~~~v-------~~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~-------------------- 136 (335)
++ ...+..|...+ ..++|+| +++++++++.+ ..|..|++..+...
T Consensus 90 g~-~~~lt~~~~~~~~~~~~~~~~~~Sp-Dg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~ 167 (1045)
T 1k32_A 90 GE-IKRITYFSGKSTGRRMFTDVAGFDP-DGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIG 167 (1045)
T ss_dssp TE-EEECCCCCEEEETTEECSEEEEECT-TCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEE
T ss_pred CC-eEEcccCCCcccccccccccccCCC-CCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEe
Confidence 77 56677788888 9999999 88877877754 35777776543211
Q ss_pred ----------------------------eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCC-cccc------
Q 019847 137 ----------------------------TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMS-SSKS------ 181 (335)
Q Consensus 137 ----------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~------ 181 (335)
...+.+|...+.++.|+++ .++++++.|+.+.+|.+.... ....
T Consensus 168 ~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~ 246 (1045)
T 1k32_A 168 RNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD 246 (1045)
T ss_dssp ESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCS
T ss_pred ccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCC
Confidence 0122456677778888877 666677777888888754211 1000
Q ss_pred ------------------------------eeeccC-----------CCCCeeEEEec-CCCCcEEEEecCCCCCeEEEE
Q 019847 182 ------------------------------LHRFTD-----------HCGGVKALAWS-PHQVNVLATGGGREDGCIKIW 219 (335)
Q Consensus 182 ------------------------------~~~~~~-----------~~~~v~~~~~~-~~~~~~~~~~~g~~d~~i~i~ 219 (335)
+..+.. |...+.+++|+ |+|+.+++.. ++.+.+|
T Consensus 247 ~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~----~~~i~~~ 322 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS----RGQAFIQ 322 (1045)
T ss_dssp SCEEEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE----TTEEEEE
T ss_pred cceeeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE----cCEEEEE
Confidence 001111 12257788899 8887666543 6889999
Q ss_pred ECCCCceEEEeecCC-cEeEEEeCCCCceeeeeeeeeeecCCCeEE-EEECCCCceeecccCCCCceeEeEEcCCCCEEE
Q 019847 220 NVQKGTCIHGIDAKA-QICGLEWNRHHKEILSGHGFSASGDGNKLC-LWKYPNMTKVGELQSSNSRILDLSQSPDGLTVA 297 (335)
Q Consensus 220 d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 297 (335)
++..++......+.. .+..+.|+ +|+.++.+ +.++.+. +||+.+++.... ..|...+..++|+|||++|+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~------s~~~~l~~~~d~~~~~~~~l-~~~~~~~~~~~~SpDG~~la 394 (1045)
T 1k32_A 323 DVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHG------TREGDFLGIYDYRTGKAEKF-EENLGNVFAMGVDRNGKFAV 394 (1045)
T ss_dssp CTTSSBEEECSCCSCEEEEEECSS-SEEEEEEE------ETTEEEEEEEETTTCCEEEC-CCCCCSEEEEEECTTSSEEE
T ss_pred cCCCCceEEccCCCcceEEeeeEc-CCCeEEEE------ECCCceEEEEECCCCCceEe-cCCccceeeeEECCCCCEEE
Confidence 988777554333445 78899999 99888866 4477888 999987765543 47778899999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCCccccccccccceec
Q 019847 298 TAGADETIRFWEAFGPSGDEDSVSHLAGLVSLKTS 332 (335)
Q Consensus 298 ~~~~dg~v~iw~~~~~~~~~~~~~~~~~i~~~~~~ 332 (335)
+++.++.|++||+.+++.......|...+.++.++
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred EECCCCeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 99999999999998876544333565566655553
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=9.2e-25 Score=186.08 Aligned_cols=216 Identities=19% Similarity=0.188 Sum_probs=153.2
Q ss_pred cccccCCCCcccccceeeeecCC-ceEEEecCCeEEEEEecCCce--------eeEE-----eecCCCCCceEEEEcCCC
Q 019847 5 ARILDAPYLMEDYYSKVIDWGRN-NVLAVALGPVLFLWKWENGKV--------KKLL-----QVPGEDDYPTSVSWSHDA 70 (335)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~--------~~~~-----~~~~~~~~v~~~~~~~~~ 70 (335)
.++++.+.......++.+++++. .+++++....+++|+...... .... ..-.+...|.+++|+|++
T Consensus 25 vri~~~~~~~~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg 104 (434)
T 2oit_A 25 VRIFDSPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN 104 (434)
T ss_dssp EECSCCCSSCCCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS
T ss_pred EEecCCccccCCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC
Confidence 44454443333445778888873 444444444499988642100 0000 011356779999999999
Q ss_pred CEEE----EEECCCcEEEEeCCCc--------e---eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe
Q 019847 71 KTLA----VGYMDSKLQLWDAETS--------K---LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN 135 (335)
Q Consensus 71 ~~l~----~~~~dg~i~iw~~~~~--------~---~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 135 (335)
++|+ +|+.|+.|++||+.++ + ....+.+|...|.+++|+|.++++|++++.||+|++||+++...
T Consensus 105 ~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 105 LTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK 184 (434)
T ss_dssp CEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE
T ss_pred CEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc
Confidence 9999 6788999999998765 1 24556679999999999995589999999999999999987644
Q ss_pred eeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeecc----CCCCCeeEEEecCCCCcEEEEecCC
Q 019847 136 VTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFT----DHCGGVKALAWSPHQVNVLATGGGR 211 (335)
Q Consensus 136 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~g~ 211 (335)
.....+|...|.+++|+|+|++|++|+.||.|++||++ ......+.... .|...+.+++|++++..+++...
T Consensus 185 -~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~-- 260 (434)
T 2oit_A 185 -VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA-- 260 (434)
T ss_dssp -EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE--
T ss_pred -eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEcc--
Confidence 34455688999999999999999999999999999987 22211111111 12347999999998865555544
Q ss_pred CCC------eEEEEECCCC
Q 019847 212 EDG------CIKIWNVQKG 224 (335)
Q Consensus 212 ~d~------~i~i~d~~~~ 224 (335)
.+| .+++|++++.
T Consensus 261 ~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 261 ADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTCCSSSCCEEEEEECCCT
T ss_pred CCCccCCCCceEEEEeccC
Confidence 333 4999999865
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=3.4e-24 Score=178.35 Aligned_cols=243 Identities=8% Similarity=0.077 Sum_probs=189.0
Q ss_pred CCCceEEEEcCCCCEEEEEEC-------CCcEEEEeCCCceeEeeecccccceeEeeecCCCCC-EEEEeeCCCcEEEEe
Q 019847 58 DDYPTSVSWSHDAKTLAVGYM-------DSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGH-ILTSGSKDKSIINHD 129 (335)
Q Consensus 58 ~~~v~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~~~d 129 (335)
...+..++|+|+++++++++. ++.|.+||..+++.+..+.. ...+..++|+| +++ ++++...++.|.+||
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINN-TTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEET-TTTEEEEEETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECC-CCCEEEEEecCCCEEEEEe
Confidence 345789999999999988874 56899999999998888764 45588999999 777 555566689999999
Q ss_pred cccCCeeeEEeecCCC---------CEEEEEeecCCCEEEEEe--CCCeEEEEEccCCCcccceeeccCCCCCeeEEEec
Q 019847 130 VRVSNNVTSCIKAHSG---------EVCGLKWSNEGNLLASGG--DDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWS 198 (335)
Q Consensus 130 ~~~~~~~~~~~~~~~~---------~i~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 198 (335)
..+++... .+..+.. .+.+++|+|+++++++++ .++.|.+||+++. +....+..+...+..++|+
T Consensus 118 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 118 AKTGEVKG-RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI---KLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp TTTCCEEE-EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT---EEEEEECCCCTTCCCCEEE
T ss_pred CCCCeeEE-EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC---ceEEEecCCCCccceEEEC
Confidence 98766533 3333322 278899999999887776 4789999998764 3445554455568889999
Q ss_pred CCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-----CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 199 PHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-----KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 199 ~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
|+++.++++. .++.|.+||+.+++.+..+.. ...+..++|+|+++.++++. ..++.|.+||..+++.
T Consensus 194 ~dg~~l~~~~---~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-----~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 194 SEGKRLYTTN---ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD-----SKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTTTEEEEEC---TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE-----SSSSEEEEEETTTCCE
T ss_pred CCCCEEEEEc---CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe-----CCCCEEEEEECCCCcE
Confidence 9998777765 589999999999998887764 23477899999999876652 4579999999999998
Q ss_pred eecccCCCCceeEeEEcCCCCEEEEEe-CCCcEEEEecCCCCCC
Q 019847 274 VGELQSSNSRILDLSQSPDGLTVATAG-ADETIRFWEAFGPSGD 316 (335)
Q Consensus 274 ~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~~~~ 316 (335)
+..+.... ...++|+|+++++++++ .++.|.+||..+.+..
T Consensus 266 ~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 266 LAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 87776544 26799999999666555 6899999999876543
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=3.3e-24 Score=176.86 Aligned_cols=237 Identities=8% Similarity=0.089 Sum_probs=178.0
Q ss_pred EEcCCCCE-EEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEee-CCCcEEEEecccCCeeeEEeec
Q 019847 65 SWSHDAKT-LAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGS-KDKSIINHDVRVSNNVTSCIKA 142 (335)
Q Consensus 65 ~~~~~~~~-l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~ 142 (335)
.|.+++++ +++.+.++.|.+||+.+++....+..+...+ .++|+| +++.+++++ .++.|.+||+.++......+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITS-DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECS-SSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcC-CCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 45666555 5667788999999999999988887666677 999999 777555555 4899999999877653555555
Q ss_pred CCCCEEEEEeecCCCEEEEEeCCC---eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCe-EEE
Q 019847 143 HSGEVCGLKWSNEGNLLASGGDDN---VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGC-IKI 218 (335)
Q Consensus 143 ~~~~i~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~-i~i 218 (335)
+..+..+++|+|++++++++..++ .|.+||+.... .+..+. ......+++|+|++++++++.. .++. +.+
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~---~~~~~~-~~~~~~~~~~spdg~~l~~~~~--~~~~~i~~ 155 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK---FISTIP-IPYDAVGIAISPNGNGLILIDR--SSANTVRR 155 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE---EEEEEE-CCTTEEEEEECTTSSCEEEEEE--TTTTEEEE
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC---eEEEEE-CCCCccceEECCCCCEEEEEec--CCCceEEE
Confidence 666665599999999999655553 89999987643 344443 3345689999999988888765 5677 999
Q ss_pred EECCCCceE-----EEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce---eecccCCCCceeEeEEc
Q 019847 219 WNVQKGTCI-----HGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK---VGELQSSNSRILDLSQS 290 (335)
Q Consensus 219 ~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~---~~~~~~~~~~i~~~~~~ 290 (335)
|++.....+ ..+........++|+|+|+++++.. ..++.|.+||+.+++. +..+..+ ..+..++|+
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-----~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~s 229 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN-----LIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVS 229 (331)
T ss_dssp EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE-----TTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEEC
T ss_pred EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe-----CCCCeEEEEECCCCcccceeeeccCC-CCCceEEEC
Confidence 998764432 2333455689999999999775542 5689999999999888 7666644 557899999
Q ss_pred CCCCEEEEEe-CCCcEEEEecCCCCC
Q 019847 291 PDGLTVATAG-ADETIRFWEAFGPSG 315 (335)
Q Consensus 291 ~~~~~l~~~~-~dg~v~iw~~~~~~~ 315 (335)
|||++|++++ .++.|.+||+.+++.
T Consensus 230 pdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 230 RDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp TTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CCCCEEEEEEcCCCEEEEEECCCCce
Confidence 9999776654 578899999987654
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=4.7e-25 Score=183.19 Aligned_cols=238 Identities=9% Similarity=0.048 Sum_probs=180.2
Q ss_pred EEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccc-cceeEeeecCCCCCEE-EEeeCCCcEEEEecccCCeeeEEe
Q 019847 63 SVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHH-RRVATSSWNHWNGHIL-TSGSKDKSIINHDVRVSNNVTSCI 140 (335)
Q Consensus 63 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~ 140 (335)
.+++++++.++++++.++.|.+||+.+++.+..+..+. ..+..++|+| +++.+ +++..++.|.+||+.+++......
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45678889999999999999999999999888876443 2678999999 77754 556678999999998665433322
Q ss_pred ecC-----CCCEEEEEeecCCCEEEEEeCC------------CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCc
Q 019847 141 KAH-----SGEVCGLKWSNEGNLLASGGDD------------NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVN 203 (335)
Q Consensus 141 ~~~-----~~~i~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 203 (335)
..+ ...+..++|+|+++++++++.+ +.|.+||+.+....+.+.... +...+.+++|+|+++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-
Confidence 222 2236789999999999998865 899999988754333344333 334688999999997
Q ss_pred EEEEecCCCCCeEEEEECCCCceEEEeecCC-------------------------------------------------
Q 019847 204 VLATGGGREDGCIKIWNVQKGTCIHGIDAKA------------------------------------------------- 234 (335)
Q Consensus 204 ~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~------------------------------------------------- 234 (335)
+++.+ +.|++||+.+++.+..+....
T Consensus 161 l~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 161 LYVAG-----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp EEEES-----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred EEEcc-----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 66642 349999999988777665331
Q ss_pred --------------------cEeEEEeCC-CCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCC
Q 019847 235 --------------------QICGLEWNR-HHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDG 293 (335)
Q Consensus 235 --------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 293 (335)
.+..++++| ++++++++ ++.|.+||+.+++.+..+... ..+.+++|+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--------~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg 306 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--------LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKG 306 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--------ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSS
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--------cCeEEEEECccCeEEEEEcCC-CCccceEECCCC
Confidence 234556678 88877654 789999999999887776543 347899999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCC
Q 019847 294 LTVATAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 294 ~~l~~~~~dg~v~iw~~~~~~~~~ 317 (335)
++|++++.++.|++||+.+.+...
T Consensus 307 ~~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 307 DKLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp SCEEEESBSSEEEEEETTTTEEEE
T ss_pred CEEEEecCCCeEEEEeccccceee
Confidence 999988889999999998765443
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=2.3e-24 Score=203.26 Aligned_cols=278 Identities=9% Similarity=0.024 Sum_probs=212.1
Q ss_pred cccceeeeecCCceEEE-ecCCeEEEEEecC-CceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE
Q 019847 16 DYYSKVIDWGRNNVLAV-ALGPVLFLWKWEN-GKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV 93 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~i~vw~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 93 (335)
...+.++.|+++.++.. ..++.+.||.++. +.. ...+..|. .+...+|+|+|++|+++. ++.|.+|++...+.
T Consensus 203 ~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~--~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l- 277 (1045)
T 1k32_A 203 STHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKD--LRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKI- 277 (1045)
T ss_dssp SSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCS--CEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCE-
T ss_pred CCcccceEEeCCEEEEEEeccCceEEEEEeCCCCc--ceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEe-
Confidence 44567788988866554 4578889998764 222 22333444 467789999999999884 89999999954443
Q ss_pred eeecc-----------cccceeEeeec-CCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCC-CEEEEEeecCCCEEE
Q 019847 94 RNLEG-----------HHRRVATSSWN-HWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSG-EVCGLKWSNEGNLLA 160 (335)
Q Consensus 94 ~~~~~-----------~~~~v~~~~~~-~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~ 160 (335)
..+.. |...+..++|+ | +++.|++++ ++.+.+|+...+.. ..+..|.. .+..++|+ +++.|+
T Consensus 278 ~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~s-dg~~l~ 352 (1045)
T 1k32_A 278 EKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYV--LKVPEPLRIRYVRRGGD-TKVAFI 352 (1045)
T ss_dssp EECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBE--EECSCCSCEEEEEECSS-SEEEEE
T ss_pred eeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCce--EEccCCCcceEEeeeEc-CCCeEE
Confidence 35544 34479999999 9 898888887 88999999875542 23556777 89999999 999999
Q ss_pred EEeCCCeEE-EEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeE
Q 019847 161 SGGDDNVVR-IWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICG 238 (335)
Q Consensus 161 ~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~ 238 (335)
+++.++.+. +||+.... ...+..|...+..++|+|+++.+++.+ .++.|++||+.+++...... +...+..
T Consensus 353 ~~s~~~~l~~~~d~~~~~----~~~l~~~~~~~~~~~~SpDG~~la~~~---~~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 353 HGTREGDFLGIYDYRTGK----AEKFEENLGNVFAMGVDRNGKFAVVAN---DRFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp EEETTEEEEEEEETTTCC----EEECCCCCCSEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred EEECCCceEEEEECCCCC----ceEecCCccceeeeEECCCCCEEEEEC---CCCeEEEEECCCCceEEeccCCCCCccc
Confidence 999888888 88976532 233346778899999999998666554 68999999999998877774 4567899
Q ss_pred EEeCCCCceeeeeeeee----eecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 239 LEWNRHHKEILSGHGFS----ASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~~~----~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
++|+|+|++++.+..-. ....++.|++||+.+++ ...+..|...+..++|+|||++|+.++.++...+|+..
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 99999999998763100 00123699999999887 66777888889999999999999999998888888754
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=3e-23 Score=172.34 Aligned_cols=250 Identities=9% Similarity=0.081 Sum_probs=175.6
Q ss_pred ccceeeeecCC-ceEEEec---CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCC-c
Q 019847 17 YYSKVIDWGRN-NVLAVAL---GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAET-S 90 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~---~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~-~ 90 (335)
..+..++|+++ ++++++. ++.|++|++++++......+..+...+..++|+|+|++|++++ .++.|.+|++.. +
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g 119 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG 119 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 34566888875 4666654 5899999998887655555555677889999999999998888 678999999963 2
Q ss_pred --eeEeeecc---------cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeE--Eeec-CCCCEEEEEeecCC
Q 019847 91 --KLVRNLEG---------HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS--CIKA-HSGEVCGLKWSNEG 156 (335)
Q Consensus 91 --~~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~-~~~~i~~~~~~~~~ 156 (335)
+.+..+.. ....+.+++|+| +++++++...++.|.+|++.....+.. .... ....+..++|+|+|
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp CEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred CeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC
Confidence 33333321 112478899999 777777777789999999984332221 1122 23467889999999
Q ss_pred CEEEE-EeCCCeEEEEEccCC-CcccceeeccCCC------CCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC---c
Q 019847 157 NLLAS-GGDDNVVRIWERSKM-SSSKSLHRFTDHC------GGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG---T 225 (335)
Q Consensus 157 ~~l~~-~~~dg~i~iwd~~~~-~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~---~ 225 (335)
+++++ ...++.|.+|+++.. .....+....... ..+..++|+|+|++++++.. .++.|.+|++... +
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~ 276 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLT 276 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEE
Confidence 96665 456789999998742 1112222222222 34888999999988877765 6899999999732 4
Q ss_pred eEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEE--ECCCCcee
Q 019847 226 CIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLW--KYPNMTKV 274 (335)
Q Consensus 226 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~--d~~~~~~~ 274 (335)
.+..+.. ...+..++|+|+|++++++. ..++.+.+| |..+++..
T Consensus 277 ~~~~~~~~~~~~~~~~~spdg~~l~v~~-----~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 277 LIQQISTEGDFPRDFDLDPTEAFVVVVN-----QNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEECSSSCCCEEEECTTSSEEEEEE-----TTTTEEEEEEECTTTCCEE
T ss_pred EeEEEecCCCCcCeEEECCCCCEEEEEE-----cCCCcEEEEEEeCCCCeEE
Confidence 4445554 34578999999999887662 456899999 55556554
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=3.1e-24 Score=195.28 Aligned_cols=271 Identities=10% Similarity=0.084 Sum_probs=188.8
Q ss_pred cceeeeecCC-c-eEEEecC---------CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEe
Q 019847 18 YSKVIDWGRN-N-VLAVALG---------PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWD 86 (335)
Q Consensus 18 ~~~~~~~~~~-~-~~~~~~~---------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 86 (335)
.+..++|+++ + +++++.+ +.+++||+++++........+|...+..++|+|||++||+++. +.|++||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 4778999985 4 4444443 7899999999886444333456666899999999999999985 7999999
Q ss_pred CCCceeEeeecccccce------------------eEeeecCCCCCEEEEeeCCC-------------------------
Q 019847 87 AETSKLVRNLEGHHRRV------------------ATSSWNHWNGHILTSGSKDK------------------------- 123 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~~l~~~~~dg------------------------- 123 (335)
+.+++.......+...+ .++.|+| +++.|++++.++
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCC
Confidence 99888766655444333 7899999 999998887543
Q ss_pred ---------cEEEEecccCCeeeEEeecC------CCCEEEEEeecCCCEEEEEeCC----CeEEEEEccCCCcccceee
Q 019847 124 ---------SIINHDVRVSNNVTSCIKAH------SGEVCGLKWSNEGNLLASGGDD----NVVRIWERSKMSSSKSLHR 184 (335)
Q Consensus 124 ---------~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~ 184 (335)
.|++||+.++.. ...+..+ ...+..++|+|||+++++.... ..|++||+.++.......
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~- 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE- 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE-
T ss_pred CCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE-
Confidence 799999986653 2233333 5678999999999988776533 579999987654322111
Q ss_pred ccCCCCCe----eEEEecCCCCcEEEE-ecCCCCC------eEEEEE-CCCCce--EEEee-cCCcEeE-EEeCCCCcee
Q 019847 185 FTDHCGGV----KALAWSPHQVNVLAT-GGGREDG------CIKIWN-VQKGTC--IHGID-AKAQICG-LEWNRHHKEI 248 (335)
Q Consensus 185 ~~~~~~~v----~~~~~~~~~~~~~~~-~~g~~d~------~i~i~d-~~~~~~--~~~~~-~~~~~~~-~~~~~~~~~~ 248 (335)
..+...+ ..++|+|+|+.++.. +. .++ .|++|| ..+++. ...+. .+..+.. ++|+|+|+.+
T Consensus 298 -~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l 374 (723)
T 1xfd_A 298 -DESEAWLHRQNEEPVFSKDGRKFFFIRAI--PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKI 374 (723)
T ss_dssp -EECSSCCCCCCCCCEECTTSCSEEEEEEE--CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEE
T ss_pred -eccCCEEeccCCCceEcCCCCeEEEEEec--ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEE
Confidence 1123333 378999999988775 43 566 577788 444441 34443 2344554 6999999998
Q ss_pred eeeeeeeeecCC--CeEEEEECCCCc--eeecccC---CCCceeEeEEcCCCCEEEEEe
Q 019847 249 LSGHGFSASGDG--NKLCLWKYPNMT--KVGELQS---SNSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 249 ~~~~~~~~~~~~--~~i~i~d~~~~~--~~~~~~~---~~~~i~~~~~~~~~~~l~~~~ 300 (335)
+... ..+ +.+++|++.... ....+.. |...+..++|+|||++|+...
T Consensus 375 ~~~~-----~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~ 428 (723)
T 1xfd_A 375 YFLS-----TEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKC 428 (723)
T ss_dssp EEEE-----SSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEEC
T ss_pred EEEE-----cCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEc
Confidence 7542 334 788999876432 3334443 566789999999999888654
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=197.35 Aligned_cols=281 Identities=12% Similarity=0.106 Sum_probs=195.6
Q ss_pred eeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCC---CceEEEEcCCCCEEEEEEC---------CCcEEEEe
Q 019847 20 KVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDD---YPTSVSWSHDAKTLAVGYM---------DSKLQLWD 86 (335)
Q Consensus 20 ~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------dg~i~iw~ 86 (335)
..++|+++ .+++.+.|+.|++||+.+++...... +|.. .+.+++|||||++|++++. ++.|++||
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILS--NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEEC--HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEc--cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 36788875 56667789999999999998655443 2322 4899999999999999876 68999999
Q ss_pred CCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCE-----------------EE
Q 019847 87 AETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEV-----------------CG 149 (335)
Q Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i-----------------~~ 149 (335)
+.+++.+.... ....+..++|+| +++.|+.+. ++.|++|++.++........++...+ .+
T Consensus 97 ~~~g~~~~~~~-l~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 97 LSNGEFVRGNE-LPRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTTTEECCSSC-CCSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCCCcccccee-cCcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 99988631111 135688999999 999988885 78999999986654322222333222 48
Q ss_pred EEeecCCCEEEEEeCCC----------------------------------eEEEEEccCCCcc--cce---eeccCCCC
Q 019847 150 LKWSNEGNLLASGGDDN----------------------------------VVRIWERSKMSSS--KSL---HRFTDHCG 190 (335)
Q Consensus 150 ~~~~~~~~~l~~~~~dg----------------------------------~i~iwd~~~~~~~--~~~---~~~~~~~~ 190 (335)
++|+|||++|++++.|. .|++||+.+.... ..+ ..+.+|..
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 253 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY 253 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc
Confidence 99999999999988652 7889998764321 011 22345778
Q ss_pred CeeEEEecCCCCcEEEEec--CCCCCeEEEEE----CCCCceEEEee----c-CCcEe-----EEEeCCCCceeeeeeee
Q 019847 191 GVKALAWSPHQVNVLATGG--GREDGCIKIWN----VQKGTCIHGID----A-KAQIC-----GLEWNRHHKEILSGHGF 254 (335)
Q Consensus 191 ~v~~~~~~~~~~~~~~~~~--g~~d~~i~i~d----~~~~~~~~~~~----~-~~~~~-----~~~~~~~~~~~~~~~~~ 254 (335)
.+..++|+||+. ++++.. +.....|.+|| +.+++....+. . ...+. .+.|+|+|+.++..
T Consensus 254 ~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~--- 329 (719)
T 1z68_A 254 YFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI--- 329 (719)
T ss_dssp EEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE---
T ss_pred eEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE---
Confidence 899999999974 555532 11123588999 87776654442 2 23344 78999999976542
Q ss_pred eeecCC--CeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCC-----CcEEEEecCC
Q 019847 255 SASGDG--NKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGAD-----ETIRFWEAFG 312 (335)
Q Consensus 255 ~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~ 312 (335)
.+..+ ..|.+||+.+++ ...+..+...+..+.++ +++.|+..+.+ +..++|.+..
T Consensus 330 -~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 330 -FSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp -EECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred -EEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 11233 467778887766 44555566667787777 77777666654 8899998875
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=1.9e-24 Score=191.85 Aligned_cols=232 Identities=10% Similarity=0.030 Sum_probs=172.8
Q ss_pred CCCceEEEEcCCCCEEEEEEC-CCcEEEEeCCCceeEeeecccc-cceeEeeecCCCCCEEEEeeC---CCcEEEEeccc
Q 019847 58 DDYPTSVSWSHDAKTLAVGYM-DSKLQLWDAETSKLVRNLEGHH-RRVATSSWNHWNGHILTSGSK---DKSIINHDVRV 132 (335)
Q Consensus 58 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~---dg~i~~~d~~~ 132 (335)
..+|++++|+|||++||+++. ||+++||++.+++..+ +..+. ..+..+.|+| + +++++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCC-C-eEEEEeccCCCCcceEEEEEec
Confidence 456999999999999999886 9999999997766554 44454 6899999998 6 78887775 45566766654
Q ss_pred --CCeeeEEeecCCCCEEEEEeecCCCE-EEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEec
Q 019847 133 --SNNVTSCIKAHSGEVCGLKWSNEGNL-LASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGG 209 (335)
Q Consensus 133 --~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 209 (335)
..... .+.. ...+...+|+|+++. +++.+.++.+.+||+.++.. . .+..+.. .+++|+|||+.++.++
T Consensus 98 ~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~---~-~l~~~~~--~~~~~spDG~~la~~~- 168 (582)
T 3o4h_A 98 SRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL---R-ELARLPG--FGFVSDIRGDLIAGLG- 168 (582)
T ss_dssp TSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE---E-EEEEESS--CEEEEEEETTEEEEEE-
T ss_pred cCCCccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE---E-EeecCCC--ceEEECCCCCEEEEEE-
Confidence 33222 2222 223456788888753 33334445566999876432 1 1222222 7899999998777555
Q ss_pred CCCC----CeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCC--eEEEEECCCCceeecccCCCCc
Q 019847 210 GRED----GCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGN--KLCLWKYPNMTKVGELQSSNSR 283 (335)
Q Consensus 210 g~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~ 283 (335)
.+ +.|++||+.+++......+...+..++|+|+|+.++++ ..++ .|++||+.+++.. .+..|...
T Consensus 169 --~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~------~~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 169 --FFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGL------ETAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp --EEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEE------ECSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred --EcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEc------cCCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 34 78999999988876544556678999999999999854 4566 8999999998887 77788888
Q ss_pred eeEeE--------EcCCCCEEEEEeCCCcEEEEec
Q 019847 284 ILDLS--------QSPDGLTVATAGADETIRFWEA 310 (335)
Q Consensus 284 i~~~~--------~~~~~~~l~~~~~dg~v~iw~~ 310 (335)
+..++ |+|||.++++++.||.+++|++
T Consensus 240 ~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 88888 9999999999999999999999
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=1.9e-23 Score=172.58 Aligned_cols=244 Identities=13% Similarity=0.099 Sum_probs=183.9
Q ss_pred ceeeeecCC--ceEEEe-cCCeEEEEEecCCceeeEEeecC---CCCCceEEEEcCCCCEEEEEE------------CCC
Q 019847 19 SKVIDWGRN--NVLAVA-LGPVLFLWKWENGKVKKLLQVPG---EDDYPTSVSWSHDAKTLAVGY------------MDS 80 (335)
Q Consensus 19 ~~~~~~~~~--~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~------------~dg 80 (335)
+..++|+++ .+++++ .++.|.+||+.+++....+.... |...+.+++|+|+|++|+++. .++
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCc
Confidence 566888875 344444 57899999999998766555432 122678899999999998886 579
Q ss_pred cEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEE
Q 019847 81 KLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLA 160 (335)
Q Consensus 81 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 160 (335)
.|.+||+.+++.+..+.. ...+..++|+| +++.|+++ ++.|.+||+.+++. ...+..+.. ...+.|+|+++.++
T Consensus 116 ~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~-~~~~~~~~~-~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 116 RVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTL-VEDKPIQSW-EAETYAQPDVLAVW 189 (337)
T ss_dssp EEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEE-EEEECSTTT-TTTTBCCCBCCCCC
T ss_pred eEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcE-eeeeecccc-CCCceeCCCccEEe
Confidence 999999999988877764 45688899999 88877777 68999999986654 333333320 01237889888665
Q ss_pred EEeCCC------------------------eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeE
Q 019847 161 SGGDDN------------------------VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCI 216 (335)
Q Consensus 161 ~~~~dg------------------------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i 216 (335)
..+.++ .|.+||+.+.... ...+..+...+.+++|+|+++.++++ ++.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~dg~~l~~~-----~~~v 262 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA--MREVRIMDVFYFSTAVNPAKTRAFGA-----YNVL 262 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE--EEEEEECSSCEEEEEECTTSSEEEEE-----ESEE
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce--EeecCCCCCceeeEEECCCCCEEEEe-----CCeE
Confidence 544332 4689998765432 33344566678899999999876664 6899
Q ss_pred EEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCC
Q 019847 217 KIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSN 281 (335)
Q Consensus 217 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 281 (335)
++||+.+++.+..+..+..+.+++|+|++++++++ +.++.|.+||+.+++.+..+..+.
T Consensus 263 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 263 ESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG------GALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE------SBSSEEEEEETTTCCEEEEEECGG
T ss_pred EEEECCCCcCcceecCCCceeeEEECCCCCEEEEE------cCCCcEEEEECcCCcEEEEEEcCC
Confidence 99999999998888887888999999999988776 558999999999999888776543
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=2.5e-21 Score=161.61 Aligned_cols=264 Identities=11% Similarity=0.057 Sum_probs=180.9
Q ss_pred cccceeeeecCC-c-eEEEecC----CeEEEEEecC--CceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEe
Q 019847 16 DYYSKVIDWGRN-N-VLAVALG----PVLFLWKWEN--GKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWD 86 (335)
Q Consensus 16 ~~~~~~~~~~~~-~-~~~~~~~----~~i~vw~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~ 86 (335)
......++|+++ + +++++.+ +.|.+|+++. ++.........+...+..+++ ++++|++++ .++.|.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 344566888874 3 5555554 7999999876 565555555555667788888 888887776 578999999
Q ss_pred CCCceeEeeec--------------ccccceeEeeecCCCCCEEEEe-eCCCcEEEEecccCCe------e------eEE
Q 019847 87 AETSKLVRNLE--------------GHHRRVATSSWNHWNGHILTSG-SKDKSIINHDVRVSNN------V------TSC 139 (335)
Q Consensus 87 ~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~------~------~~~ 139 (335)
+.....+..+. .+...+.+++|+| +++.++++ ..++.|.+|++..... + ...
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 97543332221 1122357899999 88855554 4588999999875442 2 122
Q ss_pred eecCCCCEEEEEeecCCCEEEEEe-CCCeEEEEEccCCCccccee---eccCCCCCeeEEEecCCCCcEEEEecCCC-CC
Q 019847 140 IKAHSGEVCGLKWSNEGNLLASGG-DDNVVRIWERSKMSSSKSLH---RFTDHCGGVKALAWSPHQVNVLATGGGRE-DG 214 (335)
Q Consensus 140 ~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~g~~-d~ 214 (335)
...+......++|+|+++++++++ .++.|.+||++.+. ...+. ....+......++|+|++++++++.. . ++
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~--~~~~ 282 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR--LKAD 282 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC--SSSC
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-eEEeEEEecCCCCCCCcccEEECCCCCEEEEECC--CCCC
Confidence 234456688999999999888777 68999999988532 12222 22333455789999999988877764 4 68
Q ss_pred eEEEEECC--CCc--eEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEE--ECCCCceeeccc-CCCCceeEe
Q 019847 215 CIKIWNVQ--KGT--CIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLW--KYPNMTKVGELQ-SSNSRILDL 287 (335)
Q Consensus 215 ~i~i~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~--d~~~~~~~~~~~-~~~~~i~~~ 287 (335)
.|.+|++. +++ .+..+.....+..++|+|+|++++++. ..++.|.+| |..+++...... .+...+.|+
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~-----~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v 357 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVAC-----RDTNVIQIFERDQATGLLTDIKKDIKVDKPVCL 357 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEE-----TTTTEEEEEEECTTTCCEEECSCCEECSSEEEE
T ss_pred EEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEE-----CCCCCEEEEEEECCCCcEeecceeeeCCCCeEE
Confidence 99999985 444 444455555788999999999887763 467899996 445666654432 234467888
Q ss_pred EEc
Q 019847 288 SQS 290 (335)
Q Consensus 288 ~~~ 290 (335)
.|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 875
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=1.5e-23 Score=178.69 Aligned_cols=217 Identities=12% Similarity=0.156 Sum_probs=161.9
Q ss_pred CcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC----------eee----EEeecCCC
Q 019847 80 SKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN----------NVT----SCIKAHSG 145 (335)
Q Consensus 80 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~----------~~~----~~~~~~~~ 145 (335)
+.+++|+... . .....+..+++++ ++.++++++.++ +++|+..... ... .....+..
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCcc-c------cCCCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 4678876431 1 1234678899999 888999999888 8888764211 000 01123567
Q ss_pred CEEEEEeecCCCEEE----EEeCCCeEEEEEccCC--------CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC
Q 019847 146 EVCGLKWSNEGNLLA----SGGDDNVVRIWERSKM--------SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED 213 (335)
Q Consensus 146 ~i~~~~~~~~~~~l~----~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d 213 (335)
.|.+++|+|++++|+ +++.|+.|++||+++. .....+..+.+|...|.+++|+|++..++++++ .|
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s--~D 171 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL--AD 171 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE--TT
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE--CC
Confidence 899999999999999 7888999999998754 111224566778999999999999667787776 89
Q ss_pred CeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC-------CCcee
Q 019847 214 GCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-------NSRIL 285 (335)
Q Consensus 214 ~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-------~~~i~ 285 (335)
|.|++||++++..+.... +...+.+++|+|+|+++++| +.|+.|++||.+ ++....+..| ...|.
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasg------s~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVG------KQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEE------ETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEE------cCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence 999999999986655444 45689999999999999988 679999999998 5555444333 33799
Q ss_pred EeEEcCCCCEEEEE-eCCCc------EEEEecCCCC
Q 019847 286 DLSQSPDGLTVATA-GADET------IRFWEAFGPS 314 (335)
Q Consensus 286 ~~~~~~~~~~l~~~-~~dg~------v~iw~~~~~~ 314 (335)
+++|++++.++++. +.||. +++|++...+
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 99999998877654 34433 8999998654
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=6.8e-23 Score=181.87 Aligned_cols=266 Identities=12% Similarity=0.082 Sum_probs=185.9
Q ss_pred cccceeeeecCC--ceEEEec-CCeEEEEEecCCceeeEEeecCCC-CCceEEEEcCCCCEEEEEEC---CCcEEEEeCC
Q 019847 16 DYYSKVIDWGRN--NVLAVAL-GPVLFLWKWENGKVKKLLQVPGED-DYPTSVSWSHDAKTLAVGYM---DSKLQLWDAE 88 (335)
Q Consensus 16 ~~~~~~~~~~~~--~~~~~~~-~~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~ 88 (335)
...+.+++++++ .++.++. +++++||++++++..+ +..|. ..+..++|+|| +.+++++. +...++|.+.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~---lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK---LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE---CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe---eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 445777777764 4555565 9999999998776433 33444 57899999999 77777764 4555665543
Q ss_pred C---ceeEeeecccccceeEeeecCCCC-CEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC
Q 019847 89 T---SKLVRNLEGHHRRVATSSWNHWNG-HILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD 164 (335)
Q Consensus 89 ~---~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 164 (335)
. +... .+... ..+...+|+| ++ ..+++.+.++.+.+||+.+++. ..... +.. .+++|+|||++|++++.
T Consensus 97 ~~~~g~~~-~l~~~-~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~-~~l~~-~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAV-KPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGL-RELAR-LPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp TTSTTCCE-ECTTS-CSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEE-EEEEE-ESS--CEEEEEEETTEEEEEEE
T ss_pred ccCCCccc-cccCC-CCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcE-EEeec-CCC--ceEEECCCCCEEEEEEE
Confidence 2 3322 33322 2344668888 55 4455555556666999986543 33333 333 78999999999998887
Q ss_pred C----CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC--eEEEEECCCCceEEEeec-CCcEe
Q 019847 165 D----NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG--CIKIWNVQKGTCIHGIDA-KAQIC 237 (335)
Q Consensus 165 d----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~--~i~i~d~~~~~~~~~~~~-~~~~~ 237 (335)
+ +.|++||+.++. ...+..|...+..++|+|||+.++ ++. .++ .|++||+.+++.. .+.. ...+.
T Consensus 170 ~~~~~~~i~~~d~~~g~----~~~l~~~~~~~~~~~~SpDG~~l~-~~~--~~~~~~i~~~d~~~~~~~-~~~~~~~~~~ 241 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGG----LRVFDSGEGSFSSASISPGMKVTA-GLE--TAREARLVTVDPRDGSVE-DLELPSKDFS 241 (582)
T ss_dssp EETTEEEEEEEETTTCC----CEEECCSSCEEEEEEECTTSCEEE-EEE--CSSCEEEEEECTTTCCEE-ECCCSCSHHH
T ss_pred cCCCCeEEEEEcCCCCC----ceEeecCCCccccceECCCCCEEE-Ecc--CCCeeEEEEEcCCCCcEE-EccCCCcChh
Confidence 7 789999987643 335567888899999999998777 443 677 8999999998877 4443 33455
Q ss_pred EEE--------eCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCc---EE
Q 019847 238 GLE--------WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADET---IR 306 (335)
Q Consensus 238 ~~~--------~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~---v~ 306 (335)
.+. |+|+|..++++ +.++.+++|++ ++... .+.+.+.+++|+ +++++++++.+.. +.
T Consensus 242 ~~~~~~~~~~~~spdg~~~~~~------~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~ 309 (582)
T 3o4h_A 242 SYRPTAITWLGYLPDGRLAVVA------RREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIV 309 (582)
T ss_dssp HHCCSEEEEEEECTTSCEEEEE------EETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred hhhhccccceeEcCCCcEEEEE------EcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEE
Confidence 566 99999666655 56899999999 66554 334678899999 9999998887754 66
Q ss_pred EEecCC
Q 019847 307 FWEAFG 312 (335)
Q Consensus 307 iw~~~~ 312 (335)
+|+..+
T Consensus 310 ~~d~~~ 315 (582)
T 3o4h_A 310 SLPSGE 315 (582)
T ss_dssp EETTCC
T ss_pred EEcCCC
Confidence 666543
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=1.3e-22 Score=171.08 Aligned_cols=286 Identities=12% Similarity=0.049 Sum_probs=190.8
Q ss_pred cceeeeecCC--ceEEEec-CC--eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 18 YSKVIDWGRN--NVLAVAL-GP--VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 18 ~~~~~~~~~~--~~~~~~~-~~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
++...+|+++ .++.++. ++ .|.+||+.+++...+. .++...+..++|+|||+.|+.++.++.|++||+.+++.
T Consensus 37 ~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt--~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~ 114 (388)
T 3pe7_A 37 YFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLT--EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE 114 (388)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECC--CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred hhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEee--eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 3344678874 4555555 55 4888898888765433 34555555778999999999999999999999999987
Q ss_pred EeeecccccceeEeee--cCCCCCEEEEe----------------------eCCCcEEEEecccCCeeeEEeecCCCCEE
Q 019847 93 VRNLEGHHRRVATSSW--NHWNGHILTSG----------------------SKDKSIINHDVRVSNNVTSCIKAHSGEVC 148 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~--~~~~~~~l~~~----------------------~~dg~i~~~d~~~~~~~~~~~~~~~~~i~ 148 (335)
......+...+....| ++ ++..++.. ..+..|.+||+.+++. ..+..+...+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~~~~ 191 (388)
T 3pe7_A 115 NVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES--TVILQENQWLG 191 (388)
T ss_dssp EEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE--EEEEEESSCEE
T ss_pred eeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce--EEeecCCcccc
Confidence 7666655555544443 67 78877642 2446899999987653 33445667799
Q ss_pred EEEeec-CCCEEEEEeCC------CeEEEEEccCCCcccceeeccCCC--CCeeEEEecCCCCcEEEEecC--CCCCeEE
Q 019847 149 GLKWSN-EGNLLASGGDD------NVVRIWERSKMSSSKSLHRFTDHC--GGVKALAWSPHQVNVLATGGG--REDGCIK 217 (335)
Q Consensus 149 ~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~g--~~d~~i~ 217 (335)
.++|+| +++.|+....+ ..|.++|+.... ...+..+. ..+..+.|+|+|+.++..+.. ..+..|+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN----MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC----CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEE
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc----eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEE
Confidence 999999 99999887764 367778865432 22333333 247788999999888665431 0122499
Q ss_pred EEECCCCceEEEeecCCc------EeEEEeCCCCceeeeeeee---eeecCCCeEEEEECCCCceeecccCCCC------
Q 019847 218 IWNVQKGTCIHGIDAKAQ------ICGLEWNRHHKEILSGHGF---SASGDGNKLCLWKYPNMTKVGELQSSNS------ 282 (335)
Q Consensus 218 i~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~i~d~~~~~~~~~~~~~~~------ 282 (335)
+||+.+++.......... .....|+|+|+.++....- .....+..|++||+.+++. ..+..+..
T Consensus 268 ~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~ 346 (388)
T 3pe7_A 268 SADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFE 346 (388)
T ss_dssp EECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBT
T ss_pred EEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccc
Confidence 999999875433222220 1224789999988753100 0013467899999988765 34444444
Q ss_pred -----ceeEeEEcCCCCEEEEEe-CCCcEEEEecCCC
Q 019847 283 -----RILDLSQSPDGLTVATAG-ADETIRFWEAFGP 313 (335)
Q Consensus 283 -----~i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~~ 313 (335)
.+..++|+|||+.|+..+ .+|...+|.+.-.
T Consensus 347 ~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 347 GDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred cccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 478899999998887665 5788888877644
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=3.7e-22 Score=165.68 Aligned_cols=236 Identities=12% Similarity=0.091 Sum_probs=174.6
Q ss_pred ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEE-ECCCcEEEEeCCCceeEeeeccc------c
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVG-YMDSKLQLWDAETSKLVRNLEGH------H 100 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~------~ 100 (335)
.+++.+.++.|++||..+++....+... ....+..++|+|++++++++ ..++.|.+||+.+++.+..+... .
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~ 91 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDTVYKSCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVG 91 (349)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECS-SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEecC-CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccc
Confidence 4556678999999999999876665543 22257899999999876554 46899999999999888776532 2
Q ss_pred cceeEeeecCCCCCEEEEeeCC------------CcEEEEecccCCee--eEEeecCCCCEEEEEeecCCCEEEEEeCCC
Q 019847 101 RRVATSSWNHWNGHILTSGSKD------------KSIINHDVRVSNNV--TSCIKAHSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
..+..++|+| +++.+++++.+ +.|.+||+.+++.. .... .+...+.+++|+|+++ +++++ +
T Consensus 92 ~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~--~ 166 (349)
T 1jmx_B 92 RSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAG--P 166 (349)
T ss_dssp ECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEES--S
T ss_pred ccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCCCc-EEEcc--C
Confidence 3478999999 89988888865 89999999864321 2222 2444688999999999 55554 3
Q ss_pred eEEEEEccCCCcccceeecc------------------------------------------------------------
Q 019847 167 VVRIWERSKMSSSKSLHRFT------------------------------------------------------------ 186 (335)
Q Consensus 167 ~i~iwd~~~~~~~~~~~~~~------------------------------------------------------------ 186 (335)
.|++||+.+......+..-.
T Consensus 167 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 167 DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE
Confidence 49999987643221111000
Q ss_pred -----CCCCCeeEEEecC-CCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCC
Q 019847 187 -----DHCGGVKALAWSP-HQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDG 260 (335)
Q Consensus 187 -----~~~~~v~~~~~~~-~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (335)
.+...+..++|+| +++.++++ ++.|.+||+.+++.+..+..+..+.+++|+|+++.++++ +.+
T Consensus 247 ~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~ 315 (349)
T 1jmx_B 247 TQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG------GTF 315 (349)
T ss_dssp EEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEE------SBS
T ss_pred ecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEe------cCC
Confidence 0011345677889 88766653 679999999999998888877778899999999988775 557
Q ss_pred CeEEEEECCCCceeecccCC
Q 019847 261 NKLCLWKYPNMTKVGELQSS 280 (335)
Q Consensus 261 ~~i~i~d~~~~~~~~~~~~~ 280 (335)
+.|.+||..+++.+..+..+
T Consensus 316 ~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 316 NDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEeccccceeeeeecC
Confidence 99999999999888777654
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.91 E-value=5.1e-22 Score=180.83 Aligned_cols=275 Identities=13% Similarity=0.147 Sum_probs=188.7
Q ss_pred ceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCC-----ceEEEEcCCCCEEEEEECC---------CcEE
Q 019847 19 SKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDY-----PTSVSWSHDAKTLAVGYMD---------SKLQ 83 (335)
Q Consensus 19 ~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------g~i~ 83 (335)
...+.|+++ .+++.+ |+.|++||+.+++.... +.+|... ...++|||||++|+.++.+ +.+.
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVF--LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEE--ECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEE--EechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 446899986 455544 99999999999987544 3455432 2448899999999998875 6678
Q ss_pred EEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCE----------------
Q 019847 84 LWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEV---------------- 147 (335)
Q Consensus 84 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i---------------- 147 (335)
+||+.+++.. .+..+...+...+|+| +++.|+.+. ++.|++|++.++........++...+
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEECCCCcEE-EcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 9999998854 4666778899999999 999888874 68999999986654322222333323
Q ss_pred -EEEEeecCCCEEEEEeCCCe-EEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC--
Q 019847 148 -CGLKWSNEGNLLASGGDDNV-VRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-- 223 (335)
Q Consensus 148 -~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-- 223 (335)
..+.|||||+.||.++.|.. +.+|++....... .+...+..+.+.+.|.. . ....|++||+.+
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~------~~~~~~~~~~yp~~G~~-----~--~~~~l~v~d~~~~~ 239 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES------LQYPKTVRVPYPKAGAV-----N--PTVKFFVVNTDSLS 239 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT------CSSCEEEEEECCBTTSC-----C--CEEEEEEEETTSCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCC------CCCCcceeecCCCCcCc-----C--CeeEEEEEECCCCC
Confidence 34899999999999876554 8888864322111 23445667777776642 1 345799999998
Q ss_pred -Cc--eEEEee-------cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc----ee--ecc--cCCCCcee
Q 019847 224 -GT--CIHGID-------AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT----KV--GEL--QSSNSRIL 285 (335)
Q Consensus 224 -~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~----~~--~~~--~~~~~~i~ 285 (335)
++ ....+. +...+..++|+|+|+.++.. ......+..|.+||+.+++ +. ..+ ..|...+.
T Consensus 240 ~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~--~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~ 317 (740)
T 4a5s_A 240 SVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW--LRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVG 317 (740)
T ss_dssp SSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEE--EESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSS
T ss_pred CCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEE--eCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEc
Confidence 73 222332 33458899999999966543 1122345579999999887 22 222 34555554
Q ss_pred -----EeEEcCCCCEEE-EEe-CCC--cEEEEecCCCC
Q 019847 286 -----DLSQSPDGLTVA-TAG-ADE--TIRFWEAFGPS 314 (335)
Q Consensus 286 -----~~~~~~~~~~l~-~~~-~dg--~v~iw~~~~~~ 314 (335)
..+|+|||+.|+ ..+ .+| .|++|++.++.
T Consensus 318 ~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~ 355 (740)
T 4a5s_A 318 RFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD 355 (740)
T ss_dssp SSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS
T ss_pred cCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc
Confidence 789999999877 555 344 47777777654
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.90 E-value=1.8e-20 Score=154.28 Aligned_cols=249 Identities=10% Similarity=0.122 Sum_probs=188.9
Q ss_pred CCCceEEEEcCCCCEEEEEECC------------------------CcEEEEeCCCceeEeeec-ccccceeEeeecCCC
Q 019847 58 DDYPTSVSWSHDAKTLAVGYMD------------------------SKLQLWDAETSKLVRNLE-GHHRRVATSSWNHWN 112 (335)
Q Consensus 58 ~~~v~~~~~~~~~~~l~~~~~d------------------------g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~ 112 (335)
-..+.+++++|+|+++++...+ +.|.+||..+++.+..+. .+-.....+++++ +
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~-~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT-D 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT-T
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC-C
Confidence 3568999999999988887766 479999999898876664 3345788999999 8
Q ss_pred CCEEEEeeCCCcEEEEecccCCeeeEEe---------ecCCCCEEEEEeec-CCCEEEEEe-CCCeEEEEEccCCCcccc
Q 019847 113 GHILTSGSKDKSIINHDVRVSNNVTSCI---------KAHSGEVCGLKWSN-EGNLLASGG-DDNVVRIWERSKMSSSKS 181 (335)
Q Consensus 113 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~ 181 (335)
++++++...++.|++||..........+ ..+......++++| +++++++.+ .++.|++||.. + ..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g---~~ 177 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-G---KF 177 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-S---CE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-C---CE
Confidence 8898888889999999986442233333 23445789999999 788888876 68999999943 2 22
Q ss_pred eeeccC----------CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec---CCcEeEEEeCCCCcee
Q 019847 182 LHRFTD----------HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA---KAQICGLEWNRHHKEI 248 (335)
Q Consensus 182 ~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 248 (335)
+..+.. +-.....++++|++..++++.. .++.|++||..+++.+..+.. ...+..++++| +..+
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~ 254 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLF 254 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEE
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEE
Confidence 333321 2234789999999667888776 789999999998998888753 34678899999 3333
Q ss_pred ee-eeeeeeecCCCeEEEEECCCCceeeccc---CCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCC
Q 019847 249 LS-GHGFSASGDGNKLCLWKYPNMTKVGELQ---SSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPS 314 (335)
Q Consensus 249 ~~-~~~~~~~~~~~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~ 314 (335)
.. +..+.+...+..|++|+..+++.+..+. .+...+..++++|+|.++++...++.|++|++....
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 22 2223334557799999999999988873 566678999999999888888899999999987643
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.89 E-value=1.5e-19 Score=145.91 Aligned_cols=240 Identities=15% Similarity=0.231 Sum_probs=175.5
Q ss_pred CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecc------cccceeEeeecCCCCCEEEEeeC-CCcEEEE
Q 019847 56 GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEG------HHRRVATSSWNHWNGHILTSGSK-DKSIINH 128 (335)
Q Consensus 56 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~-dg~i~~~ 128 (335)
++-..+.+++++|+++++++...++.|.+||.+ ++.+..+.. +...+..+++.+.++.++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678999999999988888889999999987 666655532 33568899995427777666643 8899999
Q ss_pred ecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeecc--CCCCCeeEEEecCCCCcEEE
Q 019847 129 DVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFT--DHCGGVKALAWSPHQVNVLA 206 (335)
Q Consensus 129 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~ 206 (335)
|. ++.........+...+..++++|+++++++...++.|.+||... +.+..+. .+...+..++++|++. +++
T Consensus 106 d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~p~~i~~~~~g~-l~v 179 (286)
T 1q7f_A 106 NQ-YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG----NVLHKFGCSKHLEFPNGVVVNDKQE-IFI 179 (286)
T ss_dssp CT-TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEEEECTTTCSSEEEEEECSSSE-EEE
T ss_pred CC-CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC----CEEEEeCCCCccCCcEEEEECCCCC-EEE
Confidence 94 34443332223446789999999999888877889999999542 2233332 3445689999999985 666
Q ss_pred EecCCCCCeEEEEECCCCceEEEeecC---CcEeEEEeCCCCceeeeeeeeeeecCCC-eEEEEECCCCceeecccCCCC
Q 019847 207 TGGGREDGCIKIWNVQKGTCIHGIDAK---AQICGLEWNRHHKEILSGHGFSASGDGN-KLCLWKYPNMTKVGELQSSNS 282 (335)
Q Consensus 207 ~~~g~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~i~d~~~~~~~~~~~~~~~ 282 (335)
+.. .++.|++||. +++.+..+... ..+..++++++|..+++. ..++ .|.+||. +++.+..+..+..
T Consensus 180 ~~~--~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~------~~~~~~i~~~~~-~g~~~~~~~~~~~ 249 (286)
T 1q7f_A 180 SDN--RAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIAD------NHNNFNLTIFTQ-DGQLISALESKVK 249 (286)
T ss_dssp EEG--GGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEE------CSSSCEEEEECT-TSCEEEEEEESSC
T ss_pred EEC--CCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEe------CCCCEEEEEECC-CCCEEEEEcccCC
Confidence 654 6899999997 46666666543 468899999999877665 4454 9999995 5666666654432
Q ss_pred --ceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 283 --RILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 283 --~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
.+.+++++|+|+++++ +.|+.|++|++...
T Consensus 250 ~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 250 HAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp CSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 4779999999987776 67999999998654
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=1.4e-20 Score=158.99 Aligned_cols=283 Identities=10% Similarity=0.014 Sum_probs=182.9
Q ss_pred cceeeeecCC-c-eEEEec---CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 18 YSKVIDWGRN-N-VLAVAL---GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 18 ~~~~~~~~~~-~-~~~~~~---~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
++..++|+++ . ++.+.. +..|.+||+.+++..... .++......+.|+|+|++|+.++.++.|++||+.+++.
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~--~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLT--EGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECC--CSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEee--cCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 3566788874 3 444433 237888999888754332 22222233478999999999999999999999998876
Q ss_pred EeeecccccceeE-------------------eeecCCCCCEEEEe-----eCCCcEEEEecccCCeeeEEeecCCCCEE
Q 019847 93 VRNLEGHHRRVAT-------------------SSWNHWNGHILTSG-----SKDKSIINHDVRVSNNVTSCIKAHSGEVC 148 (335)
Q Consensus 93 ~~~~~~~~~~v~~-------------------~~~~~~~~~~l~~~-----~~dg~i~~~d~~~~~~~~~~~~~~~~~i~ 148 (335)
......+...... +.|+| +++.++.. ..+..|.+||+.+++. .. +..+...+.
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~-~~-~~~~~~~~~ 191 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGEL-EV-IHQDTAWLG 191 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCE-EE-EEEESSCEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcE-Ee-eccCCcccc
Confidence 5554433332222 45667 66655544 4567899999986553 22 335677899
Q ss_pred EEEeec-CCCEEEEEeCC------CeEEEEEccCCCcccceeeccCC--CCCeeEEEecCCCCcEEEEecC--CCCCeEE
Q 019847 149 GLKWSN-EGNLLASGGDD------NVVRIWERSKMSSSKSLHRFTDH--CGGVKALAWSPHQVNVLATGGG--REDGCIK 217 (335)
Q Consensus 149 ~~~~~~-~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~g--~~d~~i~ 217 (335)
.+.|+| +++.|+..+.+ ..|.+||+.... ...+..+ ...+..+.|+|+++.++..... ..++.|+
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN----VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC----CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc----eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 999999 78877776654 358888876432 2222222 2357789999999887776531 0124599
Q ss_pred EEECCCCceEEEeecCCcEeEEEeCC-CCceeeeeeee----------eeecCCCeEEEEECCCCceeecccCCCC----
Q 019847 218 IWNVQKGTCIHGIDAKAQICGLEWNR-HHKEILSGHGF----------SASGDGNKLCLWKYPNMTKVGELQSSNS---- 282 (335)
Q Consensus 218 i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~i~i~d~~~~~~~~~~~~~~~---- 282 (335)
+||+.+++......... .. +.|+| +|+.++....- .....+..|++||+.+++.. .+..+..
T Consensus 268 ~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~ 344 (396)
T 3c5m_A 268 KANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDV 344 (396)
T ss_dssp EECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCC
T ss_pred EEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCcccc
Confidence 99999887654333322 33 88999 99977754210 00013578999999877643 3444433
Q ss_pred -------ceeEeEEcCCCCEEEEEeC-CCcEEEEecCC
Q 019847 283 -------RILDLSQSPDGLTVATAGA-DETIRFWEAFG 312 (335)
Q Consensus 283 -------~i~~~~~~~~~~~l~~~~~-dg~v~iw~~~~ 312 (335)
.+..++|+|||+.|+.++. ++...+|.+..
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred ccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 2567899999998877664 56666666553
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=3.6e-21 Score=175.03 Aligned_cols=284 Identities=11% Similarity=0.086 Sum_probs=186.8
Q ss_pred ceeeeecCC-c-eEEEec---------CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 19 SKVIDWGRN-N-VLAVAL---------GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 19 ~~~~~~~~~-~-~~~~~~---------~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
+.+++|+++ + ++.++. ++.|++||+++++......+ ...+..++|||||++||++. ++.|++|++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeC
Confidence 678899985 4 444443 58999999999876211222 24588999999999999986 789999999
Q ss_pred CCceeEeeec-ccccce-----------------eEeeecCCCCCEEEEeeCCC--------------------------
Q 019847 88 ETSKLVRNLE-GHHRRV-----------------ATSSWNHWNGHILTSGSKDK-------------------------- 123 (335)
Q Consensus 88 ~~~~~~~~~~-~~~~~v-----------------~~~~~~~~~~~~l~~~~~dg-------------------------- 123 (335)
.+++...... ++...+ .++.|+| +++.|++++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 9887654332 222212 5899999 999999887552
Q ss_pred --------cEEEEecccCCee--eE-----EeecCCCCEEEEEeecCCCEEEEEeCC----CeEEEEE----ccCCCccc
Q 019847 124 --------SIINHDVRVSNNV--TS-----CIKAHSGEVCGLKWSNEGNLLASGGDD----NVVRIWE----RSKMSSSK 180 (335)
Q Consensus 124 --------~i~~~d~~~~~~~--~~-----~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~ 180 (335)
.|++||+.++... .. .+..|...+..++|+||++++++.... ..|.+|| +.++....
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 7889998865431 11 123577889999999998777764432 2488889 65543222
Q ss_pred cee-eccCCCCCee-----EEEecCCCCcEEEE-ecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeee
Q 019847 181 SLH-RFTDHCGGVK-----ALAWSPHQVNVLAT-GGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGH 252 (335)
Q Consensus 181 ~~~-~~~~~~~~v~-----~~~~~~~~~~~~~~-~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (335)
... ....|...+. .+.|+|+|+.++.. ........|.+||+.+++. ..+. ....+..+.+. +++.++...
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~v~~~~~~-d~~~i~~~~ 374 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWEAINIFRV-TQDSLFYSS 374 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSCEEEEEEE-CSSEEEEEE
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceEEEEEEEE-eCCEEEEEE
Confidence 221 0034666666 78999999876653 3211233688888887764 3343 34456677766 777776541
Q ss_pred eeeeecC----CCeEEEEECCC--Cc-eeecc----cCCCCceeEeEEcCCCCEEEE-EeCC--CcEEEEecCCCC
Q 019847 253 GFSASGD----GNKLCLWKYPN--MT-KVGEL----QSSNSRILDLSQSPDGLTVAT-AGAD--ETIRFWEAFGPS 314 (335)
Q Consensus 253 ~~~~~~~----~~~i~i~d~~~--~~-~~~~~----~~~~~~i~~~~~~~~~~~l~~-~~~d--g~v~iw~~~~~~ 314 (335)
.. ++..++|.+.. +. ....+ .+|...+..+.|+|++++++. ++.+ ..+.+|++.+++
T Consensus 375 -----~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 375 -----NEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp -----SCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCC
T ss_pred -----ecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCC
Confidence 22 47788887653 32 12222 235667888999999987774 3333 468889886654
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=4.8e-20 Score=166.12 Aligned_cols=282 Identities=9% Similarity=-0.022 Sum_probs=189.6
Q ss_pred cccceeeeecCCceEEEec----CCeEEEEEecCCceeeEEeecCCCCCce---------EEEEc--CCCCE-EEEEEC-
Q 019847 16 DYYSKVIDWGRNNVLAVAL----GPVLFLWKWENGKVKKLLQVPGEDDYPT---------SVSWS--HDAKT-LAVGYM- 78 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~----~~~i~vw~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~~- 78 (335)
...+..++++++.++.+.. ++...||....+.. ...+..|...+. ...|+ |||++ |+.++.
T Consensus 23 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 23 SGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGA--EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp CSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSC--EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred CCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCC--cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 4567788899887665554 67899999644332 334445555555 56665 99998 776654
Q ss_pred CCcEEEEeCC--C-ceeEeeecc-----cccceeEeeecCCCCCEEEEeeCC----------CcEEEEecccC-----Ce
Q 019847 79 DSKLQLWDAE--T-SKLVRNLEG-----HHRRVATSSWNHWNGHILTSGSKD----------KSIINHDVRVS-----NN 135 (335)
Q Consensus 79 dg~i~iw~~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d----------g~i~~~d~~~~-----~~ 135 (335)
+..|.++++. . ++ ...+.. |...+..++|+| +++.|++++.+ ..|++||+.+. ..
T Consensus 101 ~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 5667777765 2 43 444554 567889999999 99999888876 58999999862 23
Q ss_pred eeEEee-cCCCCEEEEEeecCCCEEEEEeCCC--------eEEEEEcc-CCCcccceeeccCCCCCeeEEEecCCCCcEE
Q 019847 136 VTSCIK-AHSGEVCGLKWSNEGNLLASGGDDN--------VVRIWERS-KMSSSKSLHRFTDHCGGVKALAWSPHQVNVL 205 (335)
Q Consensus 136 ~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~iwd~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 205 (335)
...+. .+...+..++|+|||++|+.++.++ .|++||+. ++...........+...+..+.|+|||+ ++
T Consensus 179 -~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~ 256 (662)
T 3azo_A 179 -VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LI 256 (662)
T ss_dssp -SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EE
T ss_pred -eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EE
Confidence 33344 5567788899999999999887553 79999987 3311122222334567899999999998 66
Q ss_pred EEecCCCCC--eEEEEECCCCceEEEeecCCc---------EeEEEeCCCCceeeeeeeeeeecCCCeEEEE--ECCCCc
Q 019847 206 ATGGGREDG--CIKIWNVQKGTCIHGIDAKAQ---------ICGLEWNRHHKEILSGHGFSASGDGNKLCLW--KYPNMT 272 (335)
Q Consensus 206 ~~~~g~~d~--~i~i~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~--d~~~~~ 272 (335)
+++. .++ .|.+||+.+++.......+.. +..++|+|+++.++++ .. +.+++| |..+++
T Consensus 257 ~~~~--~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~------~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 257 VATD--RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH------GK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEC--TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE------BS-SSCEEEEEETTTTE
T ss_pred EEEC--CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE------Ec-CccEEEEEECCCCc
Confidence 6665 667 777778777766544433322 4567888888877765 45 777888 655555
Q ss_pred eeecccCCCCceeEe-EEcCCCCEEEEEeCCCcEEEE--ecCCC
Q 019847 273 KVGELQSSNSRILDL-SQSPDGLTVATAGADETIRFW--EAFGP 313 (335)
Q Consensus 273 ~~~~~~~~~~~i~~~-~~~~~~~~l~~~~~dg~v~iw--~~~~~ 313 (335)
+..+..|...+..+ +++++..++++++.+....+| ++.++
T Consensus 328 -~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 328 -LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp -EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred -EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 56777777777777 555444444555656544555 54444
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=2.6e-20 Score=156.95 Aligned_cols=265 Identities=9% Similarity=-0.007 Sum_probs=177.6
Q ss_pred EEecCCceeeEEeecCCCCCceE-----EEEcCCCCEEEEEEC-CC--cEEEEeCCCceeEeeecccccceeEeeecCCC
Q 019847 41 WKWENGKVKKLLQVPGEDDYPTS-----VSWSHDAKTLAVGYM-DS--KLQLWDAETSKLVRNLEGHHRRVATSSWNHWN 112 (335)
Q Consensus 41 w~~~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~-dg--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~ 112 (335)
++..++.. ...+..|...... .+|+|||++|+.++. +| .|.+||+.+++.......+...+..+.|+| +
T Consensus 15 ~~~~~g~~--~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-d 91 (388)
T 3pe7_A 15 QDASTGAQ--VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-D 91 (388)
T ss_dssp ECTTTCCE--EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-T
T ss_pred ecCCCCcc--eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-C
Confidence 34555543 3344455544444 789999999999887 66 488899999988777776666666789999 9
Q ss_pred CCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEE--eecCCCEEEEEe----------------------CCCeE
Q 019847 113 GHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLK--WSNEGNLLASGG----------------------DDNVV 168 (335)
Q Consensus 113 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~~----------------------~dg~i 168 (335)
++.|+.++.++.+++||+.+++. ......+...+.... ++|++++++... .+..|
T Consensus 92 g~~l~~~~~~~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 92 DDALFYVKDGRNLMRVDLATLEE-NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp SSEEEEEETTTEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcc-eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 99999999999999999987664 334444555454444 488999887532 34679
Q ss_pred EEEEccCCCcccceeeccCCCCCeeEEEecC-CCCcEEEEecCCC---CCeEEEEECCCCceEEEeecC--CcEeEEEeC
Q 019847 169 RIWERSKMSSSKSLHRFTDHCGGVKALAWSP-HQVNVLATGGGRE---DGCIKIWNVQKGTCIHGIDAK--AQICGLEWN 242 (335)
Q Consensus 169 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~g~~---d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~~ 242 (335)
++||+.++. ...+..+...+..+.|+| +++.++.+..+.. ...|.++|...++........ ..+..+.|+
T Consensus 171 ~~~d~~~g~----~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 171 MRVDLKTGE----STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEETTTCC----EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred EEEECCCCc----eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 999988643 223334556789999999 9987766653111 347888898766544333333 257788999
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEECCCCcee--ecccCCCC---ceeEeEEcCCCCEEEEE---------eCCCcEEEE
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKYPNMTKV--GELQSSNS---RILDLSQSPDGLTVATA---------GADETIRFW 308 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~--~~~~~~~~---~i~~~~~~~~~~~l~~~---------~~dg~v~iw 308 (335)
|+|+.++.... ..+..+..|++||+.+++.. ..+..+.. ....++|+|||+.|+.. ..+..|++|
T Consensus 247 pdg~~l~~~~~-~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 247 PDGSALVYVSY-LKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp TTSSCEEEEEE-ETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCEEEEEec-CCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 99998865421 00111234999999988743 23333111 12234799999888754 456789999
Q ss_pred ecCCCC
Q 019847 309 EAFGPS 314 (335)
Q Consensus 309 ~~~~~~ 314 (335)
|+.+++
T Consensus 326 d~~~~~ 331 (388)
T 3pe7_A 326 NMKNGT 331 (388)
T ss_dssp ETTTTE
T ss_pred eccCCc
Confidence 998754
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=6.3e-20 Score=153.28 Aligned_cols=244 Identities=8% Similarity=0.044 Sum_probs=166.4
Q ss_pred cceeeeecCC-c-eEEEecCCeEEEEEec-CCceeeEEeecCCCCCceEEEEcCCCCE--EEEEE-------------CC
Q 019847 18 YSKVIDWGRN-N-VLAVALGPVLFLWKWE-NGKVKKLLQVPGEDDYPTSVSWSHDAKT--LAVGY-------------MD 79 (335)
Q Consensus 18 ~~~~~~~~~~-~-~~~~~~~~~i~vw~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~-------------~d 79 (335)
.+..++|+++ + +++++.+ .|.+|+++ +++.........+. .+.+++|+|+|++ ++++. .+
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~ 118 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFA 118 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSC
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeecCC
Confidence 4567888874 3 5555555 99999997 77765444433222 3667899999995 44543 68
Q ss_pred CcEEEEeCC-CceeEeeec----ccccceeEeeecCCCCCEEEEeeC-CCcEEEEecc-cCCee-eEEee--cCCCCEEE
Q 019847 80 SKLQLWDAE-TSKLVRNLE----GHHRRVATSSWNHWNGHILTSGSK-DKSIINHDVR-VSNNV-TSCIK--AHSGEVCG 149 (335)
Q Consensus 80 g~i~iw~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~~~d~~-~~~~~-~~~~~--~~~~~i~~ 149 (335)
|.+.+|++. +++....+. .+...+.+++|+| ++++++++.. ++.|++|++. +++.. ...+. .+...+..
T Consensus 119 g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 119 GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 999999997 466544443 2456789999999 8888877654 6799999997 44432 12222 24567999
Q ss_pred EEeecCCCEEEEEeC-CCeEEEEEccC--CCcc---cceeeccC----CCC------CeeEEE-ecCCCCcEEEEecCCC
Q 019847 150 LKWSNEGNLLASGGD-DNVVRIWERSK--MSSS---KSLHRFTD----HCG------GVKALA-WSPHQVNVLATGGGRE 212 (335)
Q Consensus 150 ~~~~~~~~~l~~~~~-dg~i~iwd~~~--~~~~---~~~~~~~~----~~~------~v~~~~-~~~~~~~~~~~~~g~~ 212 (335)
++|+|+|+++++++. ++.|.+|+++. +... ..+..+.. +.. .+..++ |+|+|++++++.. .
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~--~ 275 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR--A 275 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE--E
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC--C
Confidence 999999999988775 68999998753 2110 11222221 122 478999 9999987776653 2
Q ss_pred CC-----eEEEEECC-CCceEEE---ee-cCCcEeEEEeCC---CCceeeeeeeeeeecCCCeEEEEECCCC
Q 019847 213 DG-----CIKIWNVQ-KGTCIHG---ID-AKAQICGLEWNR---HHKEILSGHGFSASGDGNKLCLWKYPNM 271 (335)
Q Consensus 213 d~-----~i~i~d~~-~~~~~~~---~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 271 (335)
++ .|.+|++. +++.... .. .......++|+| +|++++++. ..++.|.+|++...
T Consensus 276 ~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~-----~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 276 NKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITD-----DQEGWLEIYRWKDE 342 (365)
T ss_dssp SSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEEC-----SSSCEEEEEEEETT
T ss_pred CCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEE-----cCCCeEEEEEEchh
Confidence 23 89999996 5665432 32 233567889999 799887762 34689999998665
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=9.1e-20 Score=151.74 Aligned_cols=265 Identities=9% Similarity=0.042 Sum_probs=183.9
Q ss_pred cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC----------CCcEEEEeCCCceeEeeeccc----
Q 019847 34 LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM----------DSKLQLWDAETSKLVRNLEGH---- 99 (335)
Q Consensus 34 ~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~~---- 99 (335)
.|+.|.+||..+++....+ +.+..+ .++|+|++++++++.. ++.|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i--~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~ 104 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMV--PTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV 104 (361)
T ss_dssp GGCEEEEEETTTCCEEEEE--ECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC
T ss_pred ccCeEEEEECCCCeEEEEe--cCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc
Confidence 3679999999999876543 344443 8999999999998863 567999999999888877632
Q ss_pred --ccceeEeeecCCCCCEEEEeeC--CCcEEEEecccCCeeeEE-eecCCCCEEEEEeecCC-CEEEEEeCCCeEEEEEc
Q 019847 100 --HRRVATSSWNHWNGHILTSGSK--DKSIINHDVRVSNNVTSC-IKAHSGEVCGLKWSNEG-NLLASGGDDNVVRIWER 173 (335)
Q Consensus 100 --~~~v~~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~ 173 (335)
......++++| ++++|+++.. ++.|.+||+.+.+. ... +. .. ....+.+.|++ ..+++.+.||.+.+|++
T Consensus 105 ~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~-~~~~i~-~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~ 180 (361)
T 2oiz_A 105 QGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDY-VEDVTA-AA-GCWSVIPQPNRPRSFMTICGDGGLLTINL 180 (361)
T ss_dssp CBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEE-EEEEGG-GT-TEEEEEECTTSSSEEEEEETTSSEEEEEE
T ss_pred ccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcE-EEEEec-CC-CcceeEEcCCCCeeEEEECCCCcEEEEEE
Confidence 34577899999 9999988864 68999999987654 333 22 22 22335567754 67888889999999997
Q ss_pred cCCCccc-ce---eeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce--EEEeecC-----------CcE
Q 019847 174 SKMSSSK-SL---HRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC--IHGIDAK-----------AQI 236 (335)
Q Consensus 174 ~~~~~~~-~~---~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~--~~~~~~~-----------~~~ 236 (335)
....... .. ..+.....++ .+.++|++..++... .++.+.++|+..... ...+... ...
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~ 256 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVS---YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGY 256 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEB---TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCS
T ss_pred CCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEe---CCCeEEEEEecCCCceecccccccCccccccccccCCe
Confidence 6422111 01 1122222222 233456666665554 688999999875542 2222211 111
Q ss_pred eEEEeCCCCceeeeeeeeee-----ecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 237 CGLEWNRHHKEILSGHGFSA-----SGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
..++++|+++.+++...... ....+.|.+||+.+++.+.++..+. +.+++|+|||++|++++. +.|.+||..
T Consensus 257 ~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 257 NLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp SCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred eEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 23789999888776421000 0014589999999999999998877 899999999999998887 999999999
Q ss_pred CC
Q 019847 312 GP 313 (335)
Q Consensus 312 ~~ 313 (335)
+.
T Consensus 334 t~ 335 (361)
T 2oiz_A 334 QP 335 (361)
T ss_dssp SS
T ss_pred CC
Confidence 87
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=3.6e-19 Score=148.15 Aligned_cols=262 Identities=9% Similarity=0.078 Sum_probs=186.9
Q ss_pred eeeecCC--ceEEEe----------cCCeEEEEEecCCceeeEEeecC----CCCCceEEEEcCCCCEEEEEEC--CCcE
Q 019847 21 VIDWGRN--NVLAVA----------LGPVLFLWKWENGKVKKLLQVPG----EDDYPTSVSWSHDAKTLAVGYM--DSKL 82 (335)
Q Consensus 21 ~~~~~~~--~~~~~~----------~~~~i~vw~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--dg~i 82 (335)
.++++++ .++++. .++.|.+||..+.+....+.+.. +......++++|+|++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 6788874 344443 25679999999888776666532 2356788999999999998874 5799
Q ss_pred EEEeCCCceeEee-ecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE------eecCCCCEEEEEeecC
Q 019847 83 QLWDAETSKLVRN-LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC------IKAHSGEVCGLKWSNE 155 (335)
Q Consensus 83 ~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~------~~~~~~~i~~~~~~~~ 155 (335)
.+||+.+++.+.. +.. .. ...+.+.|.....+++.+.||.+.+|+.......... +.....++ .+.++++
T Consensus 134 ~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 210 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALD 210 (361)
T ss_dssp EEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEEC
T ss_pred EEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEeccc
Confidence 9999999998887 553 22 2224566745578889999999999998753433311 11122222 3344677
Q ss_pred CCEEEEEeCCCeEEEEEccCCCcccceeeccC----------CCCCeeEEEecCCCCcEEEEec--CC------CCCeEE
Q 019847 156 GNLLASGGDDNVVRIWERSKMSSSKSLHRFTD----------HCGGVKALAWSPHQVNVLATGG--GR------EDGCIK 217 (335)
Q Consensus 156 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~--g~------~d~~i~ 217 (335)
+..++..+.++.+.++|+..... .....+.- .......++++|+++.++++.. +. ..+.|.
T Consensus 211 g~~~~~~~~~~~v~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~ 289 (361)
T 2oiz_A 211 KDKAHFVSYYGNVYSADFSGDEV-KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIW 289 (361)
T ss_dssp SSEEEEEBTTSEEEEEECSSSSC-EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEE
T ss_pred CCEEEEEeCCCeEEEEEecCCCc-eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEE
Confidence 77888888899999999864321 11111100 0111223789999888877642 00 135899
Q ss_pred EEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCC--ceeecccCCCCceeEeEEcCCCC
Q 019847 218 IWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNM--TKVGELQSSNSRILDLSQSPDGL 294 (335)
Q Consensus 218 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 294 (335)
+||+.+++.+..+..+. +..++|+|+|++++++ +. +.|.+||..++ +.+.++..+......++++|+|+
T Consensus 290 viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~------n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 290 VMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTL------DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEETTTTEEEEEEECTT-CCEEEEETTTTEEEEE------CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCCCcEEEEEecCC-eeEEEECCCCCEEEEe------CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999999999888 9999999999988765 33 99999999999 99988877777788999999985
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.87 E-value=2.7e-19 Score=148.38 Aligned_cols=242 Identities=11% Similarity=0.101 Sum_probs=164.1
Q ss_pred CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC---C--cEEEEeCCCceeEeeecccccceeEeeec
Q 019847 35 GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD---S--KLQLWDAETSKLVRNLEGHHRRVATSSWN 109 (335)
Q Consensus 35 ~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 109 (335)
++.|.+||+++++...+ ..+..++|+|||++|+..+.+ + .|.+|++.+++....... .. +..+.|+
T Consensus 42 ~~~l~~~d~~~~~~~~l-------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~~-~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-------ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-KN-IRSLEWN 112 (347)
T ss_dssp EEEEEEEETTTCCEEEE-------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-SE-EEEEEEC
T ss_pred cceEEEEeCCCCceEEc-------ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-CC-ccceeEC
Confidence 56899999998875433 457899999999999988754 3 488889888876554443 34 9999999
Q ss_pred CCCCCEEEEeeCC---------------------------CcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE
Q 019847 110 HWNGHILTSGSKD---------------------------KSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 110 ~~~~~~l~~~~~d---------------------------g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (335)
| +++.|+.++.+ ..|.+||+.+++. ...+.. . .+..+.|+|++ +++++
T Consensus 113 p-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 113 E-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp T-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred C-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe-EEEEE
Confidence 9 88888777632 5789999976543 122333 3 77889999999 77777
Q ss_pred eCCC-------eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCC-----CCCeEEEEECCCCceEEEe
Q 019847 163 GDDN-------VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGR-----EDGCIKIWNVQKGTCIHGI 230 (335)
Q Consensus 163 ~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~-----~d~~i~i~d~~~~~~~~~~ 230 (335)
..++ ...+|.+..+ . ...+..+ ..+..+ +|+|+.++..+... ....|.+|| +++.....
T Consensus 188 ~~~~~~~~~~~~~~l~~~d~~-~---~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWEDG-K---EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEETT-E---EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred ecccccccccccccEEEeCCC-c---eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 6542 3455554422 2 2222223 444444 99998887766311 124788888 55544333
Q ss_pred ec-CCcEeE-EEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcE-EE
Q 019847 231 DA-KAQICG-LEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETI-RF 307 (335)
Q Consensus 231 ~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v-~i 307 (335)
.. ...+.. +.|+ ++ .++++ +.++.+++| +.+++.. .+..+...|.+++|+| .++++++.++.. .+
T Consensus 259 ~~~~~~~~~~~~~s-dg-~~~~~------~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l 326 (347)
T 2gop_A 259 DEVDRGVGQAKIKD-GK-VYFTL------FEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLREL 326 (347)
T ss_dssp TTCCSEEEEEEEET-TE-EEEEE------EETTEEEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEE
T ss_pred ccCCcccCCccEEc-Cc-EEEEE------ecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHh
Confidence 33 346775 8999 77 55554 568899999 8765553 3344577899999999 677777777765 78
Q ss_pred EecC
Q 019847 308 WEAF 311 (335)
Q Consensus 308 w~~~ 311 (335)
|.+.
T Consensus 327 ~~~~ 330 (347)
T 2gop_A 327 FTWD 330 (347)
T ss_dssp EEES
T ss_pred eEeC
Confidence 8776
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.87 E-value=6.5e-19 Score=145.29 Aligned_cols=264 Identities=9% Similarity=0.081 Sum_probs=182.9
Q ss_pred ceeeeecCC--ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeee
Q 019847 19 SKVIDWGRN--NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNL 96 (335)
Q Consensus 19 ~~~~~~~~~--~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 96 (335)
+.++.|+++ .++..+.++.++.|. ++. ...+..+...+.+++|+|++++++++..++.|.+||.++++.....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTIT---AEP--WLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEE---CEE--EEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cceeeecCCccceeEEeecccCcccc---cce--eEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 456777764 344446778888882 222 3344456677899999999997788888899999999888766544
Q ss_pred cccccceeEeeecCCCCCEEEEeeCC----CcEEEEecccCCeeeEEee--cCCCCEEEEEeecCCCEEEEEeC------
Q 019847 97 EGHHRRVATSSWNHWNGHILTSGSKD----KSIINHDVRVSNNVTSCIK--AHSGEVCGLKWSNEGNLLASGGD------ 164 (335)
Q Consensus 97 ~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------ 164 (335)
..+...+.++++++ +++++++...+ +.|.+||..+... ...+. .+...+..++++|+++++++...
T Consensus 83 ~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 83 VSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNL-QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp ECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSC-EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred eCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEE-EEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 44667899999999 88888877666 6899999875543 22222 24467899999999987776653
Q ss_pred CCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-CceEEEe--------ecCCc
Q 019847 165 DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-GTCIHGI--------DAKAQ 235 (335)
Q Consensus 165 dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-~~~~~~~--------~~~~~ 235 (335)
.+.|..+|..... +..+......+..++|+|++..++++.. .++.|.+||+.+ +..+..+ .....
T Consensus 161 ~~~l~~~~~~~~~----~~~~~~~~~~~~~i~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 234 (333)
T 2dg1_A 161 LGGVYYVSPDFRT----VTPIIQNISVANGIALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGHEG 234 (333)
T ss_dssp CEEEEEECTTSCC----EEEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSE
T ss_pred CceEEEEeCCCCE----EEEeecCCCcccceEECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCCCC
Confidence 2456666644321 1222222345788999999987777654 678999999964 3332211 11236
Q ss_pred EeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCC------ceeEeEEcCCCCEEEEEeCC
Q 019847 236 ICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNS------RILDLSQSPDGLTVATAGAD 302 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~~~~~d 302 (335)
+..++++++|...++. ..++.|.+||. +++.+..+..+.. .+.+++|+||++.|+.++.+
T Consensus 235 ~~~i~~d~~G~l~v~~------~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAM------YGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEBTTCCEEEEE------ETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCceEECCCCCEEEEE------cCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 7889999999876654 34789999998 5666666544432 58899999998777666555
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.85 E-value=2.1e-18 Score=156.38 Aligned_cols=247 Identities=9% Similarity=0.043 Sum_probs=175.1
Q ss_pred CCCCceEEEEcCCCCEEEEEECCC-----cEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCc-------
Q 019847 57 EDDYPTSVSWSHDAKTLAVGYMDS-----KLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKS------- 124 (335)
Q Consensus 57 ~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~------- 124 (335)
|...+..++|||||++||.+..++ .|++||+.+++....... ...+..++|+| +++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTH-DGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECT-TSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEe-CCCEEEEEEECCcccccccc
Confidence 444688999999999999876543 899999999987764332 23377899999 9998888887765
Q ss_pred ---------EEEEecccCCee-eEEe--ecCCCCEEEEEeecCCCEEEEEeC-----CCeEEEEEccC------CCcccc
Q 019847 125 ---------IINHDVRVSNNV-TSCI--KAHSGEVCGLKWSNEGNLLASGGD-----DNVVRIWERSK------MSSSKS 181 (335)
Q Consensus 125 ---------i~~~d~~~~~~~-~~~~--~~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~~~~~ 181 (335)
|++|++.++... .... ..+...+..+.|+|||++|+.++. +..|++||+.. +. ..
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--~~ 278 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI--LK 278 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS--CC
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc--cc
Confidence 999999765522 1222 224556889999999999988775 56899999875 22 12
Q ss_pred eeeccCCCCCeeEEEecCCCCcEEEEecC-CCCCeEEEEECCCCce---EEEeecCC--cEeEEEeCCCCceeeeeeeee
Q 019847 182 LHRFTDHCGGVKALAWSPHQVNVLATGGG-REDGCIKIWNVQKGTC---IHGIDAKA--QICGLEWNRHHKEILSGHGFS 255 (335)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~g-~~d~~i~i~d~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 255 (335)
...+..+...+.. .|+|++..++..+.. ..++.|.+||+.++.. ...+.+.. .+..+.|++++..+++.
T Consensus 279 ~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~---- 353 (710)
T 2xdw_A 279 WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCY---- 353 (710)
T ss_dssp CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEE----
T ss_pred eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEE----
Confidence 3344445555544 488898887777641 1235799999987742 22233322 57788998777666655
Q ss_pred eecCCC--eEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEE-e---CCCcEEEEecCCCC
Q 019847 256 ASGDGN--KLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATA-G---ADETIRFWEAFGPS 314 (335)
Q Consensus 256 ~~~~~~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~---~dg~v~iw~~~~~~ 314 (335)
..++ .|.+|++.+++.+..+..+.+.+..++++|++..++.. + ..+.++.||+.+++
T Consensus 354 --~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 --LHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp --EETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred --EECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3455 56777887788777777777788999999998766533 2 35789999998765
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=5.6e-19 Score=159.18 Aligned_cols=249 Identities=10% Similarity=-0.002 Sum_probs=171.6
Q ss_pred ecCCCCCceEEEEcCCCCEEEEE--ECCCcEEEEeCCCceeEeeeccccccee---------Eeeec--CCCCCE-EEEe
Q 019847 54 VPGEDDYPTSVSWSHDAKTLAVG--YMDSKLQLWDAETSKLVRNLEGHHRRVA---------TSSWN--HWNGHI-LTSG 119 (335)
Q Consensus 54 ~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~~-l~~~ 119 (335)
+.+|...+..++|++++-+++.. +.++...||....+.....+..+...+. ...|+ | +++. |+.+
T Consensus 19 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~ 97 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLVFT 97 (662)
T ss_dssp HHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEEEE
T ss_pred HhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEEEE
Confidence 34678889999999887666666 4578899998655555666766666665 56666 7 7776 6555
Q ss_pred e-CCCcEEEEecc--cCCeeeEEeec-----CCCCEEEEEeecCCCEEEEEeCC----------CeEEEEEccCCC--cc
Q 019847 120 S-KDKSIINHDVR--VSNNVTSCIKA-----HSGEVCGLKWSNEGNLLASGGDD----------NVVRIWERSKMS--SS 179 (335)
Q Consensus 120 ~-~dg~i~~~d~~--~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~--~~ 179 (335)
+ .+..|.++++. .... ...+.. |...+..++|+|||+.|++++.+ ..|++||+.... ..
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 4 35667777764 2022 233444 56678999999999999998877 589999987620 00
Q ss_pred cceeecc-CCCCCeeEEEecCCCCcEEEEecCC-----CCCeEEEEECC-CC---ceEEEeec-CCcEeEEEeCCCCcee
Q 019847 180 KSLHRFT-DHCGGVKALAWSPHQVNVLATGGGR-----EDGCIKIWNVQ-KG---TCIHGIDA-KAQICGLEWNRHHKEI 248 (335)
Q Consensus 180 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~g~-----~d~~i~i~d~~-~~---~~~~~~~~-~~~~~~~~~~~~~~~~ 248 (335)
.....+. .+...+..++|+|||+.++.+.... ....|++||+. ++ +....... ...+..+.|+|+|+.+
T Consensus 177 ~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 177 SAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp GGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEE
T ss_pred CceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEE
Confidence 1233344 4556788899999998877665300 01489999998 56 44333343 4678999999999955
Q ss_pred eeeeeeeeecCCC--eEEEEECCCCceeecccCCCCc--------eeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 249 LSGHGFSASGDGN--KLCLWKYPNMTKVGELQSSNSR--------ILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 249 ~~~~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
+++ ..++ .|.+||..+++.......+... +..++|+|+++++++++. +.+++|.++
T Consensus 257 ~~~------~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 257 VAT------DRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEE------CTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred EEE------CCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 544 4466 6777787677655444433222 567899999999999998 999999554
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=6.9e-18 Score=153.74 Aligned_cols=285 Identities=11% Similarity=0.096 Sum_probs=178.9
Q ss_pred eeecCC-c-eEEEecC---------CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc
Q 019847 22 IDWGRN-N-VLAVALG---------PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 22 ~~~~~~-~-~~~~~~~---------~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 90 (335)
++|+++ + ++.++.+ +.+.+||+.+++.. .+..|...+...+|||||+.||.+. ++.|++|++.++
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~---~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~ 142 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI---TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNL 142 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTS
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE---EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCC
Confidence 677874 3 4444443 67789999999854 3556777899999999999999985 789999999888
Q ss_pred eeEeeec-ccccce-----------------eEeeecCCCCCEEEEeeCCC-----------------------------
Q 019847 91 KLVRNLE-GHHRRV-----------------ATSSWNHWNGHILTSGSKDK----------------------------- 123 (335)
Q Consensus 91 ~~~~~~~-~~~~~v-----------------~~~~~~~~~~~~l~~~~~dg----------------------------- 123 (335)
+..+... ++...+ ..+.|+| +++.|+.++.|.
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCC
Confidence 7554322 222212 3588999 999888875321
Q ss_pred -------cEEEEeccc---CC--eeeEEee-----cCCCCEEEEEeecCCCEEEEEeC----CCeEEEEEccCCC----c
Q 019847 124 -------SIINHDVRV---SN--NVTSCIK-----AHSGEVCGLKWSNEGNLLASGGD----DNVVRIWERSKMS----S 178 (335)
Q Consensus 124 -------~i~~~d~~~---~~--~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~----~ 178 (335)
.|++||+.+ +. ....... +|...+..++|+||++.++.... +..|++||+.++. .
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~ 301 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC 301 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce
Confidence 478889886 52 2222221 37778999999999997766543 2379999988754 1
Q ss_pred ccceeec--cCCCCCee-----EEEecCCCCcEE-EEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeee
Q 019847 179 SKSLHRF--TDHCGGVK-----ALAWSPHQVNVL-ATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILS 250 (335)
Q Consensus 179 ~~~~~~~--~~~~~~v~-----~~~~~~~~~~~~-~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (335)
.. ...+ ..+...+. ...|+|||+.++ ..........|++||+.+++..........+..+.. ++++.++.
T Consensus 302 ~~-~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f 379 (740)
T 4a5s_A 302 LV-ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYY 379 (740)
T ss_dssp CG-GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEE
T ss_pred eE-EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEE
Confidence 11 1111 33444443 688999998776 443211225788999987766554444445555442 34655543
Q ss_pred eeee-eeecCCCeEEEEECCCCceeeccc----CCCCceeEeEEcCCCCEEEEEeCC---CcEEEEecCCC
Q 019847 251 GHGF-SASGDGNKLCLWKYPNMTKVGELQ----SSNSRILDLSQSPDGLTVATAGAD---ETIRFWEAFGP 313 (335)
Q Consensus 251 ~~~~-~~~~~~~~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~d---g~v~iw~~~~~ 313 (335)
...- .-......|...++..+.....+. ........+.|+|++++++..... ..+.+++...+
T Consensus 380 ~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 380 ISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450 (740)
T ss_dssp EESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTT
T ss_pred EEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCC
Confidence 2100 000112355555665544332333 223567889999999987655433 35777776654
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.84 E-value=1.1e-17 Score=133.61 Aligned_cols=243 Identities=8% Similarity=-0.008 Sum_probs=169.6
Q ss_pred CceEEEEcCCCCEEE-EEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeE
Q 019847 60 YPTSVSWSHDAKTLA-VGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS 138 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 138 (335)
.+.+++++++|++++ +...++.|.+|+..+.........+...+..+++.+ +++++++.. ++.|.+||...... ..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~-~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQ-TV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCC-EE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceE-ee
Confidence 678999999998666 446788999999766543332223335688899998 778666655 88999999874432 22
Q ss_pred EeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEE
Q 019847 139 CIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKI 218 (335)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i 218 (335)
........+..++++++++++++...++.|.+|+..... ...........+..++++|++. ++++.. .++.|.+
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~~~~g~-l~v~~~--~~~~i~~ 175 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT---QTVLPFTGLNDPDGVAVDNSGN-VYVTDT--DNNRVVK 175 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS---CEECCCCSCCSCCCEEECTTCC-EEEEEG--GGTEEEE
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce---eEeeccccCCCceeEEEeCCCC-EEEEEC--CCCEEEE
Confidence 222233578999999999988877778899999754321 1211222334578899999986 666554 5789999
Q ss_pred EECCCCceEEEeecC-CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEE
Q 019847 219 WNVQKGTCIHGIDAK-AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVA 297 (335)
Q Consensus 219 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 297 (335)
||............. ..+..++++++|...++. ..++.|.+|+............+...+.+++++++|++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~------~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 176 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE------HNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEE------TTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEE
T ss_pred EecCCCceEeecccCCCCceEEEECCCCCEEEEE------CCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEE
Confidence 998876654332222 568899999999655544 4578999999876554333323345689999999999888
Q ss_pred EEeCCCcEEEEecCCCCCCC
Q 019847 298 TAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 298 ~~~~dg~v~iw~~~~~~~~~ 317 (335)
+...++.|+++++...+..+
T Consensus 250 ~~~~~~~v~~~~~~~~~~~~ 269 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLEHHHHH 269 (270)
T ss_dssp EEGGGTEEEEECCCGGGSCC
T ss_pred EECCCCEEEEEcCCCccccC
Confidence 88899999999988765543
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.83 E-value=1.5e-17 Score=134.85 Aligned_cols=233 Identities=12% Similarity=0.109 Sum_probs=168.5
Q ss_pred CCCCCceEEEEcCCCC-EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC
Q 019847 56 GEDDYPTSVSWSHDAK-TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN 134 (335)
Q Consensus 56 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 134 (335)
.+.....+++|+|+++ +++++..++.|..|+..++ ...+..+...+.++++++ +++++++...++.|.+||..++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCc
Confidence 3455678999999998 7778888999999999877 556666777899999999 88888877778899999987555
Q ss_pred eeeEEeec----CCCCEEEEEeecCCCEEEEE----e-------------CCCeEEEEEccCCCcccceeeccCCCCCee
Q 019847 135 NVTSCIKA----HSGEVCGLKWSNEGNLLASG----G-------------DDNVVRIWERSKMSSSKSLHRFTDHCGGVK 193 (335)
Q Consensus 135 ~~~~~~~~----~~~~i~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~ 193 (335)
. ...... ....+..++++|+|+++++. + ..+.|..++.. . .+..+..+.....
T Consensus 102 ~-~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 102 W-ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----TLSAPIRDRVKPN 175 (296)
T ss_dssp E-EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----CEEEEECCCSSEE
T ss_pred E-EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C----CEEEeecCCCCCc
Confidence 3 222111 12345679999999988873 2 13456656543 1 2333344556678
Q ss_pred EEEecCCCCcEEEEecCCCCCeEEEEECC-CCce---EEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEEC
Q 019847 194 ALAWSPHQVNVLATGGGREDGCIKIWNVQ-KGTC---IHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKY 268 (335)
Q Consensus 194 ~~~~~~~~~~~~~~~~g~~d~~i~i~d~~-~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 268 (335)
.++|+|+++.+ ++.. .++.|++||+. +++. ...+. ....+..++++++|+..++. ++.|.+||.
T Consensus 176 gi~~s~dg~~l-v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--------~~~v~~~~~ 244 (296)
T 3e5z_A 176 GLAFLPSGNLL-VSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--------GDGVHVLTP 244 (296)
T ss_dssp EEEECTTSCEE-EEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--------TTEEEEECT
T ss_pred cEEECCCCCEE-EEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--------CCeEEEECC
Confidence 99999999877 6655 68999999987 5554 22331 23356789999999866543 789999998
Q ss_pred CCCceeecccCCCCceeEeEE-cCCCCEEEEEeCCCcEEEEecCCC
Q 019847 269 PNMTKVGELQSSNSRILDLSQ-SPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 269 ~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
. ++.+..+..+.. +++++| +|+++.|++++.++ +|.+...
T Consensus 245 ~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~---l~~~~~~ 285 (296)
T 3e5z_A 245 D-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE---FWSIETN 285 (296)
T ss_dssp T-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE---EEEEECS
T ss_pred C-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe---EEEEEcc
Confidence 6 777777777777 899999 58998888888763 5544443
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.82 E-value=2.2e-16 Score=137.96 Aligned_cols=269 Identities=9% Similarity=0.031 Sum_probs=193.5
Q ss_pred EEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCC--CceeEeeecccccceeEeee
Q 019847 31 AVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE--TSKLVRNLEGHHRRVATSSW 108 (335)
Q Consensus 31 ~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~~~v~~~~~ 108 (335)
+...++.|.++|..+++....+.. ...+..+.|+|||+++++++.|+.|.+||+. +++.+..+... .....++|
T Consensus 172 ~~~~~~~V~viD~~t~~v~~~i~~---g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~~ia~ 247 (567)
T 1qks_A 172 TLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEARSIET 247 (567)
T ss_dssp EETTTTEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEEEEEE
T ss_pred EeCCCCeEEEEECCCCeEEEEEeC---CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCceeEE
Confidence 334678999999999988765553 3356799999999999999999999999996 88888877753 45678999
Q ss_pred c----CCCCCEEEEee-CCCcEEEEecccCCeeeEEeec---------C-CCCEEEEEeecCCCEE-EEEeCCCeEEEEE
Q 019847 109 N----HWNGHILTSGS-KDKSIINHDVRVSNNVTSCIKA---------H-SGEVCGLKWSNEGNLL-ASGGDDNVVRIWE 172 (335)
Q Consensus 109 ~----~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~---------~-~~~i~~~~~~~~~~~l-~~~~~dg~i~iwd 172 (335)
+ | ++++++++. .++.+.++|..+.+.+...... | ...+..+..++++..+ +....+|.|.++|
T Consensus 248 s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd 326 (567)
T 1qks_A 248 SKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVD 326 (567)
T ss_dssp CCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred ccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 9 5 787776665 5589999998876654332211 1 2267888888876554 4445669999999
Q ss_pred ccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcE---eEEE-eCCCCce
Q 019847 173 RSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQI---CGLE-WNRHHKE 247 (335)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~---~~~~-~~~~~~~ 247 (335)
........ +..+. .......+.|+|++++++++.. .++.|.++|+.+++.+..+.. .... .... ++|++..
T Consensus 327 ~~~~~~~~-v~~i~-~~~~~~d~~~~pdgr~~~va~~--~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~ 402 (567)
T 1qks_A 327 YTDLNNLK-TTEIS-AERFLHDGGLDGSHRYFITAAN--ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGP 402 (567)
T ss_dssp TTCSSEEE-EEEEE-CCSSEEEEEECTTSCEEEEEEG--GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEE
T ss_pred cCCCccce-eeeee-ccccccCceECCCCCEEEEEeC--CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCc
Confidence 87543211 22221 2345678899999999888876 689999999999998877765 2211 1223 5777554
Q ss_pred ee-eeeeeeeecCCCeEEEEECCC-------CceeecccCCCCceeEeEEcCCCCEEEEEeC-------CCcEEEEecCC
Q 019847 248 IL-SGHGFSASGDGNKLCLWKYPN-------MTKVGELQSSNSRILDLSQSPDGLTVATAGA-------DETIRFWEAFG 312 (335)
Q Consensus 248 ~~-~~~~~~~~~~~~~i~i~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-------dg~v~iw~~~~ 312 (335)
+. ++. -.++.|.++|..+ .+.++++......-..+..+|++++|.+... .+.|.++|+.+
T Consensus 403 v~~t~~-----~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 403 VWATSH-----MGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp EEEEEB-----SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred EEEeCC-----CCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 43 321 2468999999987 5677777655444455788999999988763 35999999987
Q ss_pred C
Q 019847 313 P 313 (335)
Q Consensus 313 ~ 313 (335)
.
T Consensus 478 ~ 478 (567)
T 1qks_A 478 M 478 (567)
T ss_dssp C
T ss_pred c
Confidence 6
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.82 E-value=2.9e-17 Score=134.93 Aligned_cols=259 Identities=10% Similarity=-0.012 Sum_probs=178.1
Q ss_pred CCeEEEEEecCCceeeEEee----cCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecC
Q 019847 35 GPVLFLWKWENGKVKKLLQV----PGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNH 110 (335)
Q Consensus 35 ~~~i~vw~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (335)
++.|.++|.++++....+.. .........+.+. +++..++...++.|.+||..+++.+..+. .......+++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC
Confidence 68999999999886543211 0122445777774 34455555567899999999999988885 446788999988
Q ss_pred CCCCEEEEeeCCCcEEEEecccCCeeeEEeecCC-----CCEEEEEeecCCCEEEEEe-CCCeEEEEEccCCCcccceee
Q 019847 111 WNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHS-----GEVCGLKWSNEGNLLASGG-DDNVVRIWERSKMSSSKSLHR 184 (335)
Q Consensus 111 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~ 184 (335)
++.++++...++.|.+||..+.+. ...+.... .....+++ .+++++++.. .++.|.++|+.+... +..
T Consensus 94 -~g~lyv~~~~~~~v~~iD~~t~~~-~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~---~~~ 167 (328)
T 3dsm_A 94 -DEKAYVTQIWDYRIFIINPKTYEI-TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKV---VDE 167 (328)
T ss_dssp -TTEEEEEEBSCSEEEEEETTTTEE-EEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEE---EEE
T ss_pred -CCeEEEEECCCCeEEEEECCCCeE-EEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeE---EEE
Confidence 675555554899999999986654 33333222 14456677 3444444433 488999999876433 333
Q ss_pred ccCCCCCeeEEEecCCCCcEEEEecCCC--------CCeEEEEECCCCceEEEeec--CCcEeEEEeCCCCceeeeeeee
Q 019847 185 FTDHCGGVKALAWSPHQVNVLATGGGRE--------DGCIKIWNVQKGTCIHGIDA--KAQICGLEWNRHHKEILSGHGF 254 (335)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~~~g~~--------d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 254 (335)
+.. ......+.++|+++ +++++.+.. .+.|.++|..+++....+.. ......++++|+++.+++.
T Consensus 168 i~~-g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~--- 242 (328)
T 3dsm_A 168 LTI-GIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI--- 242 (328)
T ss_dssp EEC-SSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE---
T ss_pred EEc-CCCccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE---
Confidence 332 23456789999986 555543110 27899999999988877765 3468999999999988876
Q ss_pred eeecCCCeEEEEECCCCceeec--ccCCCCceeEeEEcC-CCCEEEEE----eCCCcEEEEecC
Q 019847 255 SASGDGNKLCLWKYPNMTKVGE--LQSSNSRILDLSQSP-DGLTVATA----GADETIRFWEAF 311 (335)
Q Consensus 255 ~~~~~~~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~-~~~~l~~~----~~dg~v~iw~~~ 311 (335)
++.|.+||..+++.... +.........++++| ++.++++. ..++.|.+||..
T Consensus 243 -----~~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 243 -----NNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -----SSSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -----ccEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 33899999988776422 222245688999999 55656665 578999999988
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=8.2e-17 Score=129.74 Aligned_cols=236 Identities=12% Similarity=0.217 Sum_probs=166.9
Q ss_pred cceeeeecCC-ceEEE-ecCCeEEEEEecCCceeeEEee----cCCCCCceEEEEc-CCCCEEEEEEC-CCcEEEEeCCC
Q 019847 18 YSKVIDWGRN-NVLAV-ALGPVLFLWKWENGKVKKLLQV----PGEDDYPTSVSWS-HDAKTLAVGYM-DSKLQLWDAET 89 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~-~~~~~i~vw~~~~~~~~~~~~~----~~~~~~v~~~~~~-~~~~~l~~~~~-dg~i~iw~~~~ 89 (335)
.+..++++++ .++++ ..++.|.+||.+ ++....+.. .++...+..+++. ++++++++... ++.|.+|| .+
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~ 108 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QY 108 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TT
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CC
Confidence 4667888764 55555 467899999987 444333322 1344578999994 67766666543 88999999 56
Q ss_pred ceeEeeecc-cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee--cCCCCEEEEEeecCCCEEEEEeCCC
Q 019847 90 SKLVRNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK--AHSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 90 ~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
++.+..+.. +...+..+++.+ +++++++...++.|.+||.. +.. ...+. .+...+..++++|+++++++...++
T Consensus 109 g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 109 GQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNV-LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp SCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE-EEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred CcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCE-EEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 777666643 345788999999 88888888888999999965 333 33332 3446789999999999888877899
Q ss_pred eEEEEEccCCCcccceeeccC--CCCCeeEEEecCCCCcEEEEecCCCCC-eEEEEECCCCceEEEeecCC---cEeEEE
Q 019847 167 VVRIWERSKMSSSKSLHRFTD--HCGGVKALAWSPHQVNVLATGGGREDG-CIKIWNVQKGTCIHGIDAKA---QICGLE 240 (335)
Q Consensus 167 ~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~g~~d~-~i~i~d~~~~~~~~~~~~~~---~~~~~~ 240 (335)
.|++||... ..+..+.. +...+..++++|++. ++++.. .++ .|.+||. +++.+..+..+. .+..++
T Consensus 186 ~i~~~~~~g----~~~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~--~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~ 257 (286)
T 1q7f_A 186 CVKVFNYEG----QYLRQIGGEGITNYPIGVGINSNGE-ILIADN--HNNFNLTIFTQ-DGQLISALESKVKHAQCFDVA 257 (286)
T ss_dssp EEEEEETTC----CEEEEESCTTTSCSEEEEEECTTCC-EEEEEC--SSSCEEEEECT-TSCEEEEEEESSCCSCEEEEE
T ss_pred EEEEEcCCC----CEEEEEccCCccCCCcEEEECCCCC-EEEEeC--CCCEEEEEECC-CCCEEEEEcccCCCCcceeEE
Confidence 999999643 23333332 235688999999985 555553 465 9999995 566766665432 377899
Q ss_pred eCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 241 WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
++|+|+.+++. .++.|++|++....+
T Consensus 258 ~~~~g~l~vs~-------~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 258 LMDDGSVVLAS-------KDYRLYIYRYVQLAP 283 (286)
T ss_dssp EETTTEEEEEE-------TTTEEEEEECSCCCC
T ss_pred ECCCCcEEEEC-------CCCeEEEEEcccccc
Confidence 99999866543 489999999866544
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=1.2e-18 Score=147.12 Aligned_cols=263 Identities=9% Similarity=-0.005 Sum_probs=170.3
Q ss_pred EEEecCCceeeEEeecCCC-----CCceEEEEcCCCCEEEEEECC---CcEEEEeCCCceeEeeecccccceeEeeecCC
Q 019847 40 LWKWENGKVKKLLQVPGED-----DYPTSVSWSHDAKTLAVGYMD---SKLQLWDAETSKLVRNLEGHHRRVATSSWNHW 111 (335)
Q Consensus 40 vw~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~ 111 (335)
..|..+++... .+..+. ..+..++|+|+|++|+..... ..|.+||+.+++.......+......+.|+|
T Consensus 14 ~~d~~~g~~~~--~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp- 90 (396)
T 3c5m_A 14 FVDSDTQVKVT--RLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST- 90 (396)
T ss_dssp EECTTTCCEEE--ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-
T ss_pred eecCCCCcceE--EEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-
Confidence 34566665433 333332 237788999999998887543 4788899988876554433333333478999
Q ss_pred CCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEE-------------------EEeecCCCEEEEE-----eCCCe
Q 019847 112 NGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCG-------------------LKWSNEGNLLASG-----GDDNV 167 (335)
Q Consensus 112 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~-------------------~~~~~~~~~l~~~-----~~dg~ 167 (335)
+++.|+.++.++.|++||+.+++. ......+...... +.|+|+++.++.. ..+..
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 91 DERAFFYVKNELNLMKVDLETLEE-QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CCCEEEEEEcCCcEEEEECCCCCc-EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 999999999999999999986553 3333333332222 3457777766554 35668
Q ss_pred EEEEEccCCCcccceeeccCCCCCeeEEEecC-CCCcEEEEecCCCC----CeEEEEECCCCceEEEeec--CCcEeEEE
Q 019847 168 VRIWERSKMSSSKSLHRFTDHCGGVKALAWSP-HQVNVLATGGGRED----GCIKIWNVQKGTCIHGIDA--KAQICGLE 240 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~g~~d----~~i~i~d~~~~~~~~~~~~--~~~~~~~~ 240 (335)
|++||+..+.. ..+..+...+..+.|+| ++..++.+..+ .. ..|.+||+..++....... ...+..+.
T Consensus 170 l~~~d~~~g~~----~~~~~~~~~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 170 LIKVDIETGEL----EVIHQDTAWLGHPIYRPFDDSTVGFCHEG-PHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp EEEEETTTCCE----EEEEEESSCEEEEEEETTEEEEEEEEECS-CSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred EEEEECCCCcE----EeeccCCcccccceECCCCCCEEEEEecC-CCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 99999876432 22223566788999999 77666665421 22 5799999876654333332 22577899
Q ss_pred eCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcC-CCCEEEEEe----------------CCC
Q 019847 241 WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSP-DGLTVATAG----------------ADE 303 (335)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~----------------~dg 303 (335)
|+|+|+.++.... ..+...+.|++||+.+++....... .. .. +.|+| ||++++.++ .++
T Consensus 245 ~spdg~~l~~~~~-~~~~~~~~l~~~d~~~g~~~~l~~~-~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 245 WIPDGSAMAYVSY-FKGQTDRVIYKANPETLENEEVMVM-PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp ECTTSSCEEEEEE-ETTTCCEEEEEECTTTCCEEEEEEC-CS-EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ECCCCCEEEEEec-CCCCccceEEEEECCCCCeEEeeeC-CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 9999998776521 0011124599999988765432211 11 23 88999 999888764 347
Q ss_pred cEEEEecCCCCC
Q 019847 304 TIRFWEAFGPSG 315 (335)
Q Consensus 304 ~v~iw~~~~~~~ 315 (335)
.|++||+.+++.
T Consensus 321 ~i~~~d~~~~~~ 332 (396)
T 3c5m_A 321 FLYVLNTKAKSA 332 (396)
T ss_dssp EEEEEETTTTBC
T ss_pred cEEEEecccCce
Confidence 899999887653
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.82 E-value=2e-15 Score=122.27 Aligned_cols=275 Identities=9% Similarity=-0.012 Sum_probs=188.8
Q ss_pred ccceeeeecCC-ceEEEec-CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE-
Q 019847 17 YYSKVIDWGRN-NVLAVAL-GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV- 93 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~-~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~- 93 (335)
..+.+++++++ .++++.. ++.|.+||.. ++.. .+....+...+.++++++++.++++...++.|..|+.. ++..
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE 91 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE
Confidence 35667887764 5666654 6899999988 6543 33334455779999999999887777668899999976 3322
Q ss_pred eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEc
Q 019847 94 RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWER 173 (335)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 173 (335)
..+......+..+++.+ ++.++++...++.|..||. ++.............+..+++.++++++++...++.|..||.
T Consensus 92 ~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp EECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 12222445788999998 8888888777889999998 344322222334567899999999988887777789999997
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec---CCcEeEEEeCCCCceeee
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA---KAQICGLEWNRHHKEILS 250 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 250 (335)
+... .. .........+..+++++++. ++++.. .++.|.+||. +++... +.. ...+..++++++|...++
T Consensus 170 -~g~~-~~-~~~~~~~~~~~~i~~~~~g~-l~v~~~--~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 170 -SGDI-TE-FKIPTPASGPVGITKGNDDA-LWFVEI--IGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp -TCCE-EE-EECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEE
T ss_pred -CCcE-EE-eeCCCCCCcceeEEECCCCC-EEEEcc--CCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEe
Confidence 3221 11 11233445688999999986 555543 5789999998 666433 322 356889999999986554
Q ss_pred eeeeeeecCCCeEEEEECCCCceee-cccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 251 GHGFSASGDGNKLCLWKYPNMTKVG-ELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 251 ~~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
. ..++.|..||. +++... .+..+...+.++++ ++++++++.. .+.+..++....
T Consensus 242 ~------~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 242 E------WGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp E------TTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred c------cCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 3 35789999998 443322 13344567899999 8888777655 566777776654
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.82 E-value=5.5e-18 Score=153.30 Aligned_cols=277 Identities=12% Similarity=-0.029 Sum_probs=178.4
Q ss_pred ecCCceEEEecCC---eEEEEE--ecCCceeeEEee----cCCCCCceEEEEcCCCCEEEEE-----ECCCcEEEEeCCC
Q 019847 24 WGRNNVLAVALGP---VLFLWK--WENGKVKKLLQV----PGEDDYPTSVSWSHDAKTLAVG-----YMDSKLQLWDAET 89 (335)
Q Consensus 24 ~~~~~~~~~~~~~---~i~vw~--~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~-----~~dg~i~iw~~~~ 89 (335)
..++.++....++ .-.+|. ...++...++.. .+|...+..++|||||++||.+ +.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 3445555554432 344454 445544333322 2455578999999999999854 3346899999999
Q ss_pred ceeEeeecccccceeEeeecCCCCCEEEEeeCCCc-------------EEEEecccCCe---eeEEeecCCCCEEEEEee
Q 019847 90 SKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKS-------------IINHDVRVSNN---VTSCIKAHSGEVCGLKWS 153 (335)
Q Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-------------i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~ 153 (335)
++.+..-.........++|+| +++.|+.++.+.. |++|++.++.. +......+...+..+.|+
T Consensus 157 g~~~~~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 157 GEWSKVDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCBCSSCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCcCCcccCcccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 886511111111126899999 9999998888766 99999986652 222223355678999999
Q ss_pred cCCCEEEEEeCCC----eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEec-CCCCCeEEEEECCCCce--
Q 019847 154 NEGNLLASGGDDN----VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGG-GREDGCIKIWNVQKGTC-- 226 (335)
Q Consensus 154 ~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-g~~d~~i~i~d~~~~~~-- 226 (335)
|||++|+.++.++ .|++||.... ....+..+...+....+ +++. +++... +..++.|.+||+.+++.
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~----~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEK----DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCS----SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCC----ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC
Confidence 9999998887666 6666654332 23333345555666666 6666 555542 11358999999987753
Q ss_pred -EEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECC-CCceeecccCC-CCceeEeEEcCCCCEEEEE--
Q 019847 227 -IHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYP-NMTKVGELQSS-NSRILDLSQSPDGLTVATA-- 299 (335)
Q Consensus 227 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~-- 299 (335)
...+.. ...+..+.++ ++..+++. ..++..++|.+. +++....+..+ .+.+..++++|++..++..
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~~lv~~~------~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GGHLSLEY------LKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TTEEEEEE------EETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CCEEEEEE------EECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 333333 3357778887 55555554 457777777554 35555556554 5678889999999777633
Q ss_pred --eCCCcEEEEecCCCC
Q 019847 300 --GADETIRFWEAFGPS 314 (335)
Q Consensus 300 --~~dg~v~iw~~~~~~ 314 (335)
...+.|++||+.+++
T Consensus 383 s~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 383 SFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp ETTEEEEEEEEETTTCC
T ss_pred CCCCCCEEEEEECCCCc
Confidence 345789999998764
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.82 E-value=4.6e-17 Score=129.97 Aligned_cols=213 Identities=11% Similarity=0.043 Sum_probs=163.3
Q ss_pred CCCEEEEEECCCcEEEEeCCCceeEeeecccc-cceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecC-CCC
Q 019847 69 DAKTLAVGYMDSKLQLWDAETSKLVRNLEGHH-RRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAH-SGE 146 (335)
Q Consensus 69 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~ 146 (335)
.+++|++++.++.|.+||.++++.+.++..+. ..+.++.+.| ++++++ +.++.|..||. +++.+.+ +..+ ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~-~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWN-IAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEE-EECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEE-EcCCCCcc
Confidence 46789999999999999999999999998765 4789999999 899888 45778999998 5665444 4433 357
Q ss_pred EEEEEeecCCCEEEEEeC-CCeEEEEEccCCCcccceeecc------CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEE
Q 019847 147 VCGLKWSNEGNLLASGGD-DNVVRIWERSKMSSSKSLHRFT------DHCGGVKALAWSPHQVNVLATGGGREDGCIKIW 219 (335)
Q Consensus 147 i~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~ 219 (335)
+.++.+.++|+++++.+. ++.+..+|.. + +.+..+. .+......+...+++..+ ++.. .++.|..|
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-G---k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l-v~~~--~~~~v~~~ 151 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMK-G---EVLSKTEFETGIERPHAQFRQINKNKKGNYL-VPLF--ATSEVREI 151 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTT-S---CEEEEEEECCSCSSGGGSCSCCEECTTSCEE-EEET--TTTEEEEE
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCC-C---CEEEEEeccCCCCcccccccCceECCCCCEE-EEec--CCCEEEEE
Confidence 889999999999999887 7778777743 2 2222221 111234556788998655 4444 79999999
Q ss_pred ECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCC------CceeEeEEcCCC
Q 019847 220 NVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSN------SRILDLSQSPDG 293 (335)
Q Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~~~~ 293 (335)
|.+ |+.+.++..+.....+...+++..++++ ..++.|..+|..+++.+.++..+. ..+..++..++|
T Consensus 152 d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~------~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G 224 (276)
T 3no2_A 152 APN-GQLLNSVKLSGTPFSSAFLDNGDCLVAC------GDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNG 224 (276)
T ss_dssp CTT-SCEEEEEECSSCCCEEEECTTSCEEEEC------BTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTS
T ss_pred CCC-CCEEEEEECCCCccceeEcCCCCEEEEe------CCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCC
Confidence 988 9999999877777788889999988876 557789999999999988775432 237788889999
Q ss_pred CEEEEEe
Q 019847 294 LTVATAG 300 (335)
Q Consensus 294 ~~l~~~~ 300 (335)
.++++..
T Consensus 225 ~i~v~~~ 231 (276)
T 3no2_A 225 GLYICNW 231 (276)
T ss_dssp CEEEEEE
T ss_pred CEEEEec
Confidence 8888773
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.81 E-value=2.7e-16 Score=137.42 Aligned_cols=292 Identities=11% Similarity=0.059 Sum_probs=200.5
Q ss_pred ceeeeecCC--ceEEEecCCeEEEEEec--CCceeeEEeecCCCCCceEEEEc----CCCCEEEEEEC-CCcEEEEeCCC
Q 019847 19 SKVIDWGRN--NVLAVALGPVLFLWKWE--NGKVKKLLQVPGEDDYPTSVSWS----HDAKTLAVGYM-DSKLQLWDAET 89 (335)
Q Consensus 19 ~~~~~~~~~--~~~~~~~~~~i~vw~~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-dg~i~iw~~~~ 89 (335)
+..+.++++ .+++++.++.|.+||+. +++....+.. ......++|+ |+|++++++.. ++.+.++|..+
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~---G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI---GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC---CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec---CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 345677764 56777788999999995 6665544432 2346899999 69999988764 58999999999
Q ss_pred ceeEeeeccc----------cc-ceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCE
Q 019847 90 SKLVRNLEGH----------HR-RVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNL 158 (335)
Q Consensus 90 ~~~~~~~~~~----------~~-~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 158 (335)
.+.+..+... .. .+..+..++.....++....+|.|.++|......+.............+.|+|++++
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY 355 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCE
Confidence 9988776532 12 567788888445566666778999999987654433323334556778999999998
Q ss_pred EEEEe-CCCeEEEEEccCCCcccceee--ccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-------CceEE
Q 019847 159 LASGG-DDNVVRIWERSKMSSSKSLHR--FTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-------GTCIH 228 (335)
Q Consensus 159 l~~~~-~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-------~~~~~ 228 (335)
++++. .++.|.++|+.+......+.. ...|.+.-..+ ++|++..++++.. -.++.|.++|..+ .+.+.
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~-~g~~~Vsvid~~~~~~~~~~~kvv~ 433 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSH-MGDDSVALIGTDPEGHPDNAWKILD 433 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEB-SSSSEEEEEECCTTTCTTTBTSEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCC-CCCCeEEEecCCCCCCccccCEEEE
Confidence 87766 578999999887543322222 12243322222 5888666766652 1368999999987 66788
Q ss_pred EeecCC-cEeEEEeCCCCceeeeeeeeeeecC---CCeEEEEECCCC-----cee-ecc--------cCCCCceeEeEEc
Q 019847 229 GIDAKA-QICGLEWNRHHKEILSGHGFSASGD---GNKLCLWKYPNM-----TKV-GEL--------QSSNSRILDLSQS 290 (335)
Q Consensus 229 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~i~d~~~~-----~~~-~~~--------~~~~~~i~~~~~~ 290 (335)
.++... .-..+..+|+++++.+...+ ..+ .+.|.++|+.+. ... ..+ ......+..+.|+
T Consensus 434 ~i~~~g~g~~~i~~~p~~~~l~v~~~~--~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 434 SFPALGGGSLFIKTHPNSQYLYVDATL--NPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp EEECSCSCCCCEECCTTCSEEEEECTT--CSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEEC
T ss_pred EEecCCCCCEEEEeCCCCCeEEEecCC--CCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeEC
Confidence 887643 33567899999998875211 011 469999999876 211 122 1123478999999
Q ss_pred CCCCEEEEEe-----CCCcEEEEecCCCCCCC
Q 019847 291 PDGLTVATAG-----ADETIRFWEAFGPSGDE 317 (335)
Q Consensus 291 ~~~~~l~~~~-----~dg~v~iw~~~~~~~~~ 317 (335)
|+|+.+..+. .++.|.++|..+.+...
T Consensus 512 ~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 512 KDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp TTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred CCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 9998887663 37999999988876543
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=2.8e-16 Score=129.20 Aligned_cols=239 Identities=10% Similarity=0.090 Sum_probs=170.4
Q ss_pred cceeeeecCC-ceEEEecCC-------------------------eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCC
Q 019847 18 YSKVIDWGRN-NVLAVALGP-------------------------VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAK 71 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~-------------------------~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 71 (335)
.+..++++++ +++++...+ .|.+||.++++...... .++-..+..++++|+|+
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG-KNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC-TTTCSSEEEEEECTTSC
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC-CCccCCceEEEECCCCC
Confidence 4667888874 566655443 69999998888754332 24456789999999999
Q ss_pred EEEEEECCCcEEEEeCCCce-eEeee---------cccccceeEeeecCCCCCEEEEee-CCCcEEEEecccCCeeeEEe
Q 019847 72 TLAVGYMDSKLQLWDAETSK-LVRNL---------EGHHRRVATSSWNHWNGHILTSGS-KDKSIINHDVRVSNNVTSCI 140 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~-~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~ 140 (335)
++++...++.|++|+..... .+..+ ..+-.....++++|.++.++++.+ .++.|++|+.. +.. ...+
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~-~~~~ 181 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKF-VTQW 181 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCE-EEEE
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCE-EEEe
Confidence 88888888999999986442 44444 233446889999986677777776 68999999943 443 3333
Q ss_pred ec----------CCCCEEEEEeecC-CCEEEEEeCCCeEEEEEccCCCcccceeec--cCCCCCeeEEEecCCCCcEEEE
Q 019847 141 KA----------HSGEVCGLKWSNE-GNLLASGGDDNVVRIWERSKMSSSKSLHRF--TDHCGGVKALAWSPHQVNVLAT 207 (335)
Q Consensus 141 ~~----------~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~ 207 (335)
.. +......++++|+ ++++++...++.|++||..++. .+..+ ..+...+..++++| + .++..
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~p-g-~~~~~ 256 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE---FVREIKHASFGRNVFAISYIP-G-FLFAV 256 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEEEECCTTTTTCEEEEEEET-T-EEEEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc---EEEEEeccccCCCcceeeecC-C-EEEEe
Confidence 21 2234889999998 7777777788999999987433 33333 34556788999999 3 33333
Q ss_pred ec-----CCCCCeEEEEECCCCceEEEee----cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC
Q 019847 208 GG-----GREDGCIKIWNVQKGTCIHGID----AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 208 ~~-----g~~d~~i~i~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
.+ ...+..|++||..+++.+..+. ....+..++++|+|..+++. ..++.|++|++..
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad------~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGD------AHTNTVWKFTLTE 322 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEE------SSSCCEEEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEE------CCCCEEEEEeCCc
Confidence 32 1135589999999999998874 23458899999999655554 5688999999754
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.79 E-value=5.3e-17 Score=133.82 Aligned_cols=240 Identities=9% Similarity=0.026 Sum_probs=170.4
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeE
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS 138 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 138 (335)
..|.+++|++++..++..+.++.++.| .++....+..+...+.+++|++ ++++++++..++.|.+||..++.. ..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~-~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEI-KR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE-EE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcE-EE
Confidence 457788899988877777778899999 3556666666777789999998 888888888899999999876543 33
Q ss_pred EeecCCCCEEEEEeecCCCEEEEEeCC----CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC----
Q 019847 139 CIKAHSGEVCGLKWSNEGNLLASGGDD----NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG---- 210 (335)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g---- 210 (335)
....+...+.+++++|+++++++...+ +.|.+||.+.......+. ...+...+..++++|++. ++++...
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~ 158 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE-DLSTAYCIDDMVFDSKGG-FYFTDFRGYST 158 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC-SSSSCCCEEEEEECTTSC-EEEEECCCBTT
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc-cCccCCcccceEECCCCC-EEEEecccccc
Confidence 333566789999999999988877666 689999977543211111 112345689999999986 4444320
Q ss_pred CCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC-Cceee--------cccCCC
Q 019847 211 REDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN-MTKVG--------ELQSSN 281 (335)
Q Consensus 211 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~-~~~~~--------~~~~~~ 281 (335)
...+.|..+|..+++..........+..++|+|+++.++.+. ..++.|.+||..+ +..+. .+.++
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~-----~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~- 232 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE-----TTANRLHRIALEDDGVTIQPFGATIPYYFTGH- 232 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEE-----GGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-
T ss_pred CCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEe-----CCCCeEEEEEecCCCcCcccccceEEEecCCC-
Confidence 013567777776655544333344678899999998665432 4478999999864 33221 12222
Q ss_pred CceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 282 SRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 282 ~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
..+..++++++|+++++...++.|.+|+..
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 457889999999988888788999999984
No 189
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.78 E-value=3.3e-14 Score=115.09 Aligned_cols=273 Identities=10% Similarity=-0.005 Sum_probs=185.9
Q ss_pred ccceeeeecC-CceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe
Q 019847 17 YYSKVIDWGR-NNVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 94 (335)
..+.++.+++ +.++++. .++.|.+||.. ++... +.++.+...+.++++.+++++.++...++.|..+|.. ++...
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 3556677776 4555555 57899999987 66543 3444445678999999999877776667889999987 55432
Q ss_pred -eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEc
Q 019847 95 -NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWER 173 (335)
Q Consensus 95 -~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~ 173 (335)
........+..+++.+ +++++++...++.|..+|.. +.............+..+++.++++++++...++.|..+|.
T Consensus 97 ~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN 174 (300)
T ss_dssp EECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred ecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC
Confidence 2222346788999998 88888887778899999987 44322223334567899999999997776666789999997
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEE-ee-cCCcEeEEEeCCCCceeeee
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHG-ID-AKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 251 (335)
. ... . ......+...+..+++++++. ++++.. ..+.|.+||. +++.... .. ....+.+++++++|...++.
T Consensus 175 ~-g~~-~-~~~~~~~~~~~~~i~~d~~g~-l~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 175 T-GKL-E-EYPLPTNAAAPVGITSGNDGA-LWFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp T-CCE-E-EEECSSTTCCEEEEEECTTSS-EEEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred C-CcE-E-EeeCCCCCCCcceEEECCCCC-EEEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 3 221 1 112223445688999999884 555543 5678999998 5554332 22 23468899999999865544
Q ss_pred eeeeeecCCCeEEEEECCCCcee-ecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEec
Q 019847 252 HGFSASGDGNKLCLWKYPNMTKV-GELQSSNSRILDLSQSPDGLTVATAGADETIRFWEA 310 (335)
Q Consensus 252 ~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~ 310 (335)
..++.|..||. +++.. ..+......+.+++++++|+++++.. . .|..++.
T Consensus 248 ------~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 248 ------WGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp ------TTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred ------cCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 34689999998 44332 22333445688999999998666554 4 6666664
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=9.3e-16 Score=124.21 Aligned_cols=236 Identities=10% Similarity=0.057 Sum_probs=163.3
Q ss_pred ccceeeeecCC-c-eEE-EecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE
Q 019847 17 YYSKVIDWGRN-N-VLA-VALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV 93 (335)
Q Consensus 17 ~~~~~~~~~~~-~-~~~-~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 93 (335)
.....+.|+++ . ++. ...++.|..|+.+++ . ..+ ..+...+.+++++|+|+++++...++.|.+||..+++..
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~--~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPE--MHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEE--ESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEE--ECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 34567888874 3 444 456889999999887 3 333 345677899999999998777766789999999888754
Q ss_pred eeeccc----ccceeEeeecCCCCCEEEE----eeC-------------CCcEEEEecccCCeeeEEeecCCCCEEEEEe
Q 019847 94 RNLEGH----HRRVATSSWNHWNGHILTS----GSK-------------DKSIINHDVRVSNNVTSCIKAHSGEVCGLKW 152 (335)
Q Consensus 94 ~~~~~~----~~~v~~~~~~~~~~~~l~~----~~~-------------dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 152 (335)
...... ...+..++++| +++++++ |+. .+.|..++.. .. ...+..+......++|
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GT-LSAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SC-EEEEECCCSSEEEEEE
T ss_pred EEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC--CC-EEEeecCCCCCccEEE
Confidence 433221 23467899999 8888887 331 2355555543 33 3334556677899999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCcc-cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee
Q 019847 153 SNEGNLLASGGDDNVVRIWERSKMSSS-KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID 231 (335)
Q Consensus 153 ~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~ 231 (335)
+|+++.+++.+.++.|++||+...... .....+..+...+..++++++|. ++++. ++.|.+||.. ++.+..+.
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~----~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA----GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE----TTEEEEECTT-SCEEEEEE
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc----CCeEEEECCC-CCEEEEEE
Confidence 999998877777899999998732111 11122233455677899999996 55443 6889999986 77777777
Q ss_pred cCCcEeEEEe-CCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 232 AKAQICGLEW-NRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 232 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
.+..+.+++| .|+++.++++ + .+.+.-++..+.+.
T Consensus 254 ~~~~~~~~~f~~~d~~~L~v~------t-~~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 254 TPQTTSNLCFGGPEGRTLYMT------V-STEFWSIETNVRGL 289 (296)
T ss_dssp CSSCCCEEEEESTTSCEEEEE------E-TTEEEEEECSCCBC
T ss_pred CCCCceeEEEECCCCCEEEEE------c-CCeEEEEEcccccc
Confidence 6555889999 6888877765 2 35666667666554
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=1.4e-15 Score=138.01 Aligned_cols=245 Identities=9% Similarity=0.058 Sum_probs=169.0
Q ss_pred ccceeeeecCC-ceEE-Eec-CC----eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCc--------
Q 019847 17 YYSKVIDWGRN-NVLA-VAL-GP----VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSK-------- 81 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~-~~~-~~----~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------- 81 (335)
..+..++|+++ +.++ +.. +| .|++||+.+++..... +.. ..+..++|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~--~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LER--VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEE--ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccC--cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 35677899985 4444 333 22 8999999999876532 222 23678999999999999987766
Q ss_pred --------EEEEeCCCce----eEeeecccccceeEeeecCCCCCEEEEeeC-----CCcEEEEeccc------CCeeeE
Q 019847 82 --------LQLWDAETSK----LVRNLEGHHRRVATSSWNHWNGHILTSGSK-----DKSIINHDVRV------SNNVTS 138 (335)
Q Consensus 82 --------i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~------~~~~~~ 138 (335)
|++|++.+++ .+.....+...+..+.|+| +++.|+..+. +..|++||+.+ +.....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 9999998875 2223333455678999999 8888877664 56899999986 332244
Q ss_pred EeecCCCCEEEEEeecCCCEEEEEeCC----CeEEEEEccCCCcccceeeccCCCC--CeeEEEecCCCCcEEEEecCCC
Q 019847 139 CIKAHSGEVCGLKWSNEGNLLASGGDD----NVVRIWERSKMSSSKSLHRFTDHCG--GVKALAWSPHQVNVLATGGGRE 212 (335)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~g~~ 212 (335)
.+..+...+.. .|+|+|+.|+..+.+ +.|.+||+..+.. .....+..+.. .+..+.|++++ .++++.. .
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~--~ 355 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKWKVLVPEHEKDVLEWVACVRSN-FLVLCYL--H 355 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCEEEEEEEETTT-EEEEEEE--E
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-ccceeccCCCCCCeEEEEEEEcCC-EEEEEEE--E
Confidence 45556655554 488988888776653 3699999876431 12233334433 57789998655 5666665 6
Q ss_pred CC--eEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc
Q 019847 213 DG--CIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT 272 (335)
Q Consensus 213 d~--~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~ 272 (335)
++ .|++||+.+++.+..+.. ...+..+.++|++..++.. +.+....+.+..||+.+++
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~--~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ--FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE--EECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE--EeCCCCCCEEEEEECCCCc
Confidence 76 467778877877777664 3467889999999877644 2233567899999998876
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.77 E-value=1.7e-15 Score=123.60 Aligned_cols=239 Identities=8% Similarity=0.070 Sum_probs=166.3
Q ss_pred CCCceEEEEcCCCCEEEE-------EECCCcEEEEeCCCceeEeeec----ccccceeEeeecCCC-CCEEEEeeCCCcE
Q 019847 58 DDYPTSVSWSHDAKTLAV-------GYMDSKLQLWDAETSKLVRNLE----GHHRRVATSSWNHWN-GHILTSGSKDKSI 125 (335)
Q Consensus 58 ~~~v~~~~~~~~~~~l~~-------~~~dg~i~iw~~~~~~~~~~~~----~~~~~v~~~~~~~~~-~~~l~~~~~dg~i 125 (335)
-..+.+++|++++.++++ +..++.|.+||..+++...... ++...+..+++++ + ++++++.. .+.|
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVADM-RLGL 94 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS-SSSEEEEEET-TTEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec-CCCcEEEEEC-CCCE
Confidence 445789999999987777 5678899999988877543222 2446788999998 6 66555544 4478
Q ss_pred EEEecccCCeeeEE-eec----CCCCEEEEEeecCCCEEEEEeCC---------------CeEEEEEccCCCcccceeec
Q 019847 126 INHDVRVSNNVTSC-IKA----HSGEVCGLKWSNEGNLLASGGDD---------------NVVRIWERSKMSSSKSLHRF 185 (335)
Q Consensus 126 ~~~d~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~ 185 (335)
.+||.. +.. ... ... ....+.+++++++++++++...+ +.|..||.. .. ...+
T Consensus 95 ~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~~~~ 167 (314)
T 1pjx_A 95 LVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ----MIQV 167 (314)
T ss_dssp EEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----EEEE
T ss_pred EEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----EEEe
Confidence 899987 442 222 111 12347899999999888776655 567777644 21 1122
Q ss_pred cCCCCCeeEEEec----CCCCcEEEEecCCCCCeEEEEECC-CCce-----EEEeecC--CcEeEEEeCCCCceeeeeee
Q 019847 186 TDHCGGVKALAWS----PHQVNVLATGGGREDGCIKIWNVQ-KGTC-----IHGIDAK--AQICGLEWNRHHKEILSGHG 253 (335)
Q Consensus 186 ~~~~~~v~~~~~~----~~~~~~~~~~~g~~d~~i~i~d~~-~~~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 253 (335)
..+......++++ |+++.++++.. .++.|.+||.. +++. ...+... ..+..++++++|...++.
T Consensus 168 ~~~~~~~~~i~~~~~~d~dg~~l~v~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-- 243 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHMNDGRPYQLIVAET--PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVAN-- 243 (314)
T ss_dssp EEEESSEEEEEEEECTTSCEEEEEEEET--TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEE--
T ss_pred ccCCCCcceEEEecccCCCCCEEEEEEC--CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEE--
Confidence 2233446789999 99877777654 67899999986 4442 2222222 457889999999877654
Q ss_pred eeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEE-EEEeCCCcEEEEecCCC
Q 019847 254 FSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTV-ATAGADETIRFWEAFGP 313 (335)
Q Consensus 254 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~v~iw~~~~~ 313 (335)
..++.|.+||..+++.+..+..+...+.+++++|+++.| ++...++.|..|++...
T Consensus 244 ----~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 244 ----WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp ----ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred ----cCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 347899999998777776666666779999999999855 45556788999998754
No 193
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=7.5e-16 Score=127.64 Aligned_cols=231 Identities=13% Similarity=0.201 Sum_probs=151.5
Q ss_pred cceeeeecCC--ceEEEecC---C--eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC-----------
Q 019847 18 YSKVIDWGRN--NVLAVALG---P--VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD----------- 79 (335)
Q Consensus 18 ~~~~~~~~~~--~~~~~~~~---~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------- 79 (335)
.+..+.|+++ .++.++.+ + .|.+|++.+++........ . +..++|+|+|+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES---E-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 3556889974 34444432 3 4888888888765554432 3 8999999999999888642
Q ss_pred ----------------CcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCC-------cEEEEecccCCee
Q 019847 80 ----------------SKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK-------SIINHDVRVSNNV 136 (335)
Q Consensus 80 ----------------g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-------~i~~~d~~~~~~~ 136 (335)
..|.+||+.+++.+..+.. . .+..+.|+| ++ +++++..++ ...+|.+. ....
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~ 210 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWE-DGKE 210 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEE-TTEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeC-CCce
Confidence 5799999998887455554 4 888999999 77 777776542 44555555 4433
Q ss_pred eEEeecCCCCEEEEEeecCCCEEEEEeCC--------CeEEEEEccCCCcccceeeccCCCCCeeE-EEecCCCCcEEEE
Q 019847 137 TSCIKAHSGEVCGLKWSNEGNLLASGGDD--------NVVRIWERSKMSSSKSLHRFTDHCGGVKA-LAWSPHQVNVLAT 207 (335)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~ 207 (335)
.. +..+ ..+..+ +|+|++|+.++.+ ..|.+|| .+ +.......+...+.. +.|+ ++ ++++
T Consensus 211 ~~-l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---~~~~l~~~~~~~~~~~~~~s-dg--~~~~ 278 (347)
T 2gop_A 211 EK-MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK---EVMGILDEVDRGVGQAKIKD-GK--VYFT 278 (347)
T ss_dssp EE-EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS---CEEESSTTCCSEEEEEEEET-TE--EEEE
T ss_pred EE-eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC---ceEeccccCCcccCCccEEc-Cc--EEEE
Confidence 33 3333 555554 9999999887754 3688887 22 223333445667876 8999 76 6666
Q ss_pred ecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCe-EEEEECCCCceeecccCCCC
Q 019847 208 GGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNK-LCLWKYPNMTKVGELQSSNS 282 (335)
Q Consensus 208 ~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~i~d~~~~~~~~~~~~~~~ 282 (335)
++ .++.+++| +.+++..........+.++.|+| ..++++ +.++. ..+|.+. ++ ...+..|..
T Consensus 279 ~~--~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~------~~~~~~~~l~~~~-g~-~~~lt~~n~ 341 (347)
T 2gop_A 279 LF--EEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLK------ETATRLRELFTWD-GE-EKQLTDYND 341 (347)
T ss_dssp EE--ETTEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEE------ECSSSCCEEEEES-SS-EEECCCTTS
T ss_pred Ee--cCCcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEE------cCCCChHHheEeC-Cc-EEEeccccH
Confidence 55 78999999 87676655555567789999999 444443 22333 2566554 43 344555544
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=2.5e-14 Score=115.72 Aligned_cols=243 Identities=10% Similarity=0.040 Sum_probs=171.9
Q ss_pred EeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee-ecccccceeEeeecCCCCCEEEEeeCCCcEEEEec
Q 019847 52 LQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN-LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 52 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~ 130 (335)
+.++.+...+.++++.++|+.+++...++.|.+||.. ++.... .......+..+++.+ ++.++++...++.|..||.
T Consensus 8 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 8 LNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITK 85 (299)
T ss_dssp EECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred EcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECC
Confidence 3445556779999999999877766667899999988 554332 223456788999998 8888888777889999997
Q ss_pred ccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC
Q 019847 131 RVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG 210 (335)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g 210 (335)
. +.............+..+++.++++++++...++.|..||. +... ...........+..+++.+++. ++++..
T Consensus 86 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~--~~~~~~~~~~~~~~i~~~~~g~-l~v~~~- 159 (299)
T 2z2n_A 86 K-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI--REYELPNKGSYPSFITLGSDNA-LWFTEN- 159 (299)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--EEEECSSTTCCEEEEEECTTSC-EEEEET-
T ss_pred C-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE--EEecCCCCCCCCceEEEcCCCC-EEEEeC-
Confidence 6 33211112224567899999999988887777889999997 3221 1112223445688999999985 555543
Q ss_pred CCCCeEEEEECCCCceEEE-ee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeec-ccCCCCceeEe
Q 019847 211 REDGCIKIWNVQKGTCIHG-ID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE-LQSSNSRILDL 287 (335)
Q Consensus 211 ~~d~~i~i~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~i~~~ 287 (335)
.++.|..||. +++.... .. ....+..+++++++...++. ..++.|.+||. +++.... ...+...+.++
T Consensus 160 -~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~------~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 160 -QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVE------IIGNKIGRITT-SGEITEFKIPTPNARPHAI 230 (299)
T ss_dssp -TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEE------TTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred -CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEc------cCCceEEEECC-CCcEEEEECCCCCCCceeE
Confidence 5789999998 6665432 22 23457899999998865544 45789999998 6554322 33345678999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecC
Q 019847 288 SQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 288 ~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
+++++|+++++...++.|..|+..
T Consensus 231 ~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 231 TAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EECSTTCEEEEETTTTEEEEEETT
T ss_pred EECCCCCEEEeccCCceEEEECCC
Confidence 999999877776678899999973
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.75 E-value=3e-14 Score=118.63 Aligned_cols=266 Identities=9% Similarity=-0.015 Sum_probs=177.1
Q ss_pred eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE----------CCCcEEEEeCCCceeEeeeccc-------
Q 019847 37 VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY----------MDSKLQLWDAETSKLVRNLEGH------- 99 (335)
Q Consensus 37 ~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~------- 99 (335)
.|.++|..+++....+. .... . .++++|||++++++. .++.|.+||..+.+.+..+...
T Consensus 48 ~v~v~D~~t~~~~~~i~--~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVN--GGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEEEECCCCeEEEEec--CCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 88999999988755443 2223 3 899999999999886 3678999999998887776432
Q ss_pred ccceeEeeecCCCCCEEEEeeC--CCcEEEEecccCCeeeEE-eecCCCCEEEEEeecCC-CEEEEEeCCCeEEEEEccC
Q 019847 100 HRRVATSSWNHWNGHILTSGSK--DKSIINHDVRVSNNVTSC-IKAHSGEVCGLKWSNEG-NLLASGGDDNVVRIWERSK 175 (335)
Q Consensus 100 ~~~v~~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~ 175 (335)
......+.++| ++++|+++.. ++.|.++| .+++. ... +. ... ++.+.|++ +.+++.+.||.+.++|. .
T Consensus 124 g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~-~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~ 195 (373)
T 2mad_H 124 GPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSS-DDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-A 195 (373)
T ss_pred CCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCE-EeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-C
Confidence 12356889999 9998888874 57899999 76654 333 22 222 24445544 45667778999999998 5
Q ss_pred CCccccee--eccCCCCCe-eEEEecCCCCcEEEEecCCCCCeEEEEECCCCc--eEEEeec-----------CCcEeEE
Q 019847 176 MSSSKSLH--RFTDHCGGV-KALAWSPHQVNVLATGGGREDGCIKIWNVQKGT--CIHGIDA-----------KAQICGL 239 (335)
Q Consensus 176 ~~~~~~~~--~~~~~~~~v-~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~--~~~~~~~-----------~~~~~~~ 239 (335)
+....... .......++ ....+.+++..++... ..+.+.+.|+..+. .+..++. +.....+
T Consensus 196 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~ 272 (373)
T 2mad_H 196 GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV---YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQV 272 (373)
T ss_pred CcEEEEEeccccccCCcceeecceeEecCCEEEEEc---CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeE
Confidence 43221111 000112222 2345666666655554 47899999997653 2233321 1223447
Q ss_pred EeCCCCceeeeeeeeee----ecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCC-EEEEEe-CCCcEEEEecCCC
Q 019847 240 EWNRHHKEILSGHGFSA----SGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL-TVATAG-ADETIRFWEAFGP 313 (335)
Q Consensus 240 ~~~~~~~~~~~~~~~~~----~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~-~dg~v~iw~~~~~ 313 (335)
.++|+++.+++...-.. ....+.|.++|..+++.+.++... .....++|+|||+ +++++. .++.|.+||+.+.
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 78999888766421000 002468999999999998888543 3578999999999 777777 5899999999988
Q ss_pred CCCCC
Q 019847 314 SGDED 318 (335)
Q Consensus 314 ~~~~~ 318 (335)
+....
T Consensus 352 ~vv~~ 356 (373)
T 2mad_H 352 DQDQS 356 (373)
T ss_pred CEEee
Confidence 76554
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=4.1e-15 Score=118.69 Aligned_cols=239 Identities=8% Similarity=-0.021 Sum_probs=161.4
Q ss_pred cceeeeecCC-ceEE-E-ecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe
Q 019847 18 YSKVIDWGRN-NVLA-V-ALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~-~-~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 94 (335)
....++++++ .+++ + ..++.|.+|+..+..... .. ..+...+.+++++++++++++.. ++.|.+||........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~-~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LP-FNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CC-CCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Ee-eCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee
Confidence 5667888764 5555 4 467899999976654321 11 23345688999999998665555 8899999987654432
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
........+..+++.+ +++++++...++.|.+|+..+.... .........+..++++++++++++...++.|.+||..
T Consensus 102 ~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 2222335788999998 8888888778889999976543322 1122233467889999999977777778899999976
Q ss_pred CCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeee
Q 019847 175 KMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHG 253 (335)
Q Consensus 175 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 253 (335)
... .......+...+..+++++++ .++++.. .++.|.+||............ ...+..++++++|..+++.
T Consensus 180 ~~~---~~~~~~~~~~~p~~i~~d~~g-~l~v~~~--~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~-- 251 (270)
T 1rwi_B 180 SNN---QVVLPFTDITAPWGIAVDEAG-TVYVTEH--NTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVAD-- 251 (270)
T ss_dssp TCC---EEECCCSSCCSEEEEEECTTC-CEEEEET--TTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEE--
T ss_pred CCc---eEeecccCCCCceEEEECCCC-CEEEEEC--CCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEE--
Confidence 532 122222233668899999998 5666654 588999999876544332222 2468899999999865554
Q ss_pred eeeecCCCeEEEEECCCCce
Q 019847 254 FSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 254 ~~~~~~~~~i~i~d~~~~~~ 273 (335)
..++.|++++....+.
T Consensus 252 ----~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 252 ----RGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ----GGGTEEEEECCCGGGS
T ss_pred ----CCCCEEEEEcCCCccc
Confidence 5689999999876554
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=2e-15 Score=137.51 Aligned_cols=246 Identities=10% Similarity=0.042 Sum_probs=158.7
Q ss_pred CCCCceEEEEcCCCCEEEEEECC-----CcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCc-------
Q 019847 57 EDDYPTSVSWSHDAKTLAVGYMD-----SKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKS------- 124 (335)
Q Consensus 57 ~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~------- 124 (335)
|...+..++|||||++||.+..+ ..|++||+.+++.+... .+...+..++|+| + +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEEST-T-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEEC-C-CEEEEEEecCcccccccc
Confidence 33467889999999999887653 35999999999876542 1223346899999 7 77777766543
Q ss_pred -------EEEEecccCCee-eEEee--cCCCCEEEEEeecCCCEEEEEeCCC-----eEEEEEccCCCcccceeeccCCC
Q 019847 125 -------IINHDVRVSNNV-TSCIK--AHSGEVCGLKWSNEGNLLASGGDDN-----VVRIWERSKMSSSKSLHRFTDHC 189 (335)
Q Consensus 125 -------i~~~d~~~~~~~-~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~ 189 (335)
|++|++.++... ...+. .+...+..+.|+|||++|+..+.++ .|++||+.++.. .....+..+.
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~ 316 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-GPVTALIPDL 316 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-CCCEEEECSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-cccEEecCCC
Confidence 889998765421 12222 2334588999999999998887654 899999876411 1023333344
Q ss_pred CCeeEEEecCCCCcEEEEec-CCCCCeEEEEECCCC--ceEEEeecC-CcEeEEEeCCCCceeeeeeeeeeecCCCeEEE
Q 019847 190 GGVKALAWSPHQVNVLATGG-GREDGCIKIWNVQKG--TCIHGIDAK-AQICGLEWNRHHKEILSGHGFSASGDGNKLCL 265 (335)
Q Consensus 190 ~~v~~~~~~~~~~~~~~~~~-g~~d~~i~i~d~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 265 (335)
..+.... +|+++.++.... +..++.|.+||+.++ +....+... ..+..+.++ ++..+++. ..++..++
T Consensus 317 ~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~------~~dg~~~l 388 (741)
T 1yr2_A 317 KAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASY------IHDAKSQV 388 (741)
T ss_dssp SSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEE------EETTEEEE
T ss_pred CceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEE------EECCEEEE
Confidence 4444443 488887777653 112467999999875 333333333 345567776 44444443 45777666
Q ss_pred EECC-CCceeecccC-CCCceeEeEEcCCCCEEEEE----eCCCcEEEEecCCCC
Q 019847 266 WKYP-NMTKVGELQS-SNSRILDLSQSPDGLTVATA----GADETIRFWEAFGPS 314 (335)
Q Consensus 266 ~d~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~----~~dg~v~iw~~~~~~ 314 (335)
|.+. +++....+.. +.+.+..++++|+++.|+.. ...+.|++||+.+++
T Consensus 389 ~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 389 LAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 6443 4555555554 35678899999998766622 345789999987654
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=1e-14 Score=116.45 Aligned_cols=212 Identities=10% Similarity=0.053 Sum_probs=155.3
Q ss_pred cCCc-eEEEecCCeEEEEEecCCceeeEEeecCCC-CCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccc-c
Q 019847 25 GRNN-VLAVALGPVLFLWKWENGKVKKLLQVPGED-DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHH-R 101 (335)
Q Consensus 25 ~~~~-~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~ 101 (335)
+|++ +++++.++.|.+||.++++....+. .+. ..+.++.++|+|++++ +.++.|..||. +++.+..+..+. .
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~--~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~ 77 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYP--LEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGC 77 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEE--CCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeC--CCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCc
Confidence 3454 4445579999999999999865544 343 4688999999999888 35778999999 899999888653 5
Q ss_pred ceeEeeecCCCCCEEEEeeC-CCcEEEEecccCCeeeEEee-----cCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccC
Q 019847 102 RVATSSWNHWNGHILTSGSK-DKSIINHDVRVSNNVTSCIK-----AHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSK 175 (335)
Q Consensus 102 ~v~~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 175 (335)
.+.++.+.+ +++++++.+. ++.+..+|.. ++.+...-. .+......+++.++|+++++...++.|..||.+
T Consensus 78 ~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 78 EMQTARILP-DGNALVAWCGHPSTILEVNMK-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp EEEEEEECT-TSCEEEEEESTTEEEEEECTT-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cccccEECC-CCCEEEEecCCCCEEEEEeCC-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 788889999 9999999887 7788888763 443332211 111234456778999999999999999999965
Q ss_pred CCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-------CcEeEEEeCCCCcee
Q 019847 176 MSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-------AQICGLEWNRHHKEI 248 (335)
Q Consensus 176 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 248 (335)
+ +.+..+... ..+.++...+++..+ +++. .++.|..+|..+|+.+.++... ..+..+...++|..+
T Consensus 155 G---~~~w~~~~~-~~~~~~~~~~~g~~~-v~~~--~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 155 G---QLLNSVKLS-GTPFSSAFLDNGDCL-VACG--DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp S---CEEEEEECS-SCCCEEEECTTSCEE-EECB--TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred C---CEEEEEECC-CCccceeEcCCCCEE-EEeC--CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 3 334444433 445677888888644 4443 5778999999999999888642 126778888888877
Q ss_pred eee
Q 019847 249 LSG 251 (335)
Q Consensus 249 ~~~ 251 (335)
++.
T Consensus 228 v~~ 230 (276)
T 3no2_A 228 ICN 230 (276)
T ss_dssp EEE
T ss_pred EEe
Confidence 765
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=1.1e-14 Score=119.61 Aligned_cols=227 Identities=9% Similarity=-0.033 Sum_probs=160.4
Q ss_pred CCCcEEEEeCCCceeEeeecc------cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEE
Q 019847 78 MDSKLQLWDAETSKLVRNLEG------HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLK 151 (335)
Q Consensus 78 ~dg~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~ 151 (335)
.++.|.++|.++++....+.. .......+.+. ++.++++...++.|.+||..+.+.+.. +. .......++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~-i~-~~~~p~~i~ 90 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGR-IT-GFTSPRYIH 90 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEE-EE-CCSSEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEE-cC-CCCCCcEEE
Confidence 378999999999987765421 22345667764 566777777789999999997765443 33 456789999
Q ss_pred eecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCC-----CCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce
Q 019847 152 WSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHC-----GGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC 226 (335)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~ 226 (335)
++++++.+++...++.|.+||+.+... ...+.... .....+++ ++..++++..+ .++.|.++|+++++.
T Consensus 91 ~~~~g~lyv~~~~~~~v~~iD~~t~~~---~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~-~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 91 FLSDEKAYVTQIWDYRIFIINPKTYEI---TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS-YQNRILKIDTETDKV 164 (328)
T ss_dssp EEETTEEEEEEBSCSEEEEEETTTTEE---EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT-TCCEEEEEETTTTEE
T ss_pred EeCCCeEEEEECCCCeEEEEECCCCeE---EEEEEcCCccccCCCcceEEE--ECCEEEEEcCC-CCCEEEEEECCCCeE
Confidence 999885555444789999999876432 22222111 14556777 34466666420 378999999999999
Q ss_pred EEEeecCCcEeEEEeCCCCceeeeeeeeee----ecCCCeEEEEECCCCceeecccCC-CCceeEeEEcCCCCEEEEEeC
Q 019847 227 IHGIDAKAQICGLEWNRHHKEILSGHGFSA----SGDGNKLCLWKYPNMTKVGELQSS-NSRILDLSQSPDGLTVATAGA 301 (335)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~ 301 (335)
+..+........+.++|+|+.+++...-.. ..+.+.|.++|..+++....+... ......++++|+++.|+++..
T Consensus 165 ~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 165 VDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred EEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 988887777789999999987665521000 000378999999998887666532 236789999999999888765
Q ss_pred CCcEEEEecCCCCCC
Q 019847 302 DETIRFWEAFGPSGD 316 (335)
Q Consensus 302 dg~v~iw~~~~~~~~ 316 (335)
.|.+||..+.+..
T Consensus 245 --~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 245 --DIWRMPVEADRVP 257 (328)
T ss_dssp --SEEEEETTCSSCC
T ss_pred --EEEEEECCCCcee
Confidence 8999999876653
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.72 E-value=2.9e-15 Score=135.51 Aligned_cols=244 Identities=10% Similarity=0.057 Sum_probs=160.7
Q ss_pred ccceeeeecCC-ceEEEe------cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCc--------
Q 019847 17 YYSKVIDWGRN-NVLAVA------LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSK-------- 81 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~------~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------- 81 (335)
..+..++|+++ +.++.+ .+..|++||+.+++......+... ....++|+|||+.|+.++.|..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEecCCCCCccccC
Confidence 45778899985 444432 135899999999986411122211 1267899999999999988776
Q ss_pred -----EEEEeCCCce----eEeeecccccceeEeeecCCCCCEEEEeeCCC----cEEEEecccCCeeeEEeecCCCCEE
Q 019847 82 -----LQLWDAETSK----LVRNLEGHHRRVATSSWNHWNGHILTSGSKDK----SIINHDVRVSNNVTSCIKAHSGEVC 148 (335)
Q Consensus 82 -----i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~~~i~ 148 (335)
|++|++.+++ ++.....+...+..+.|+| +++.|+.++.++ .|.+++..++. ...+..+...+.
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~~~ 275 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD--FRLLVKGVGAKY 275 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS--CEEEEECSSCCE
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc--eEEeecCCCceE
Confidence 9999998875 3334444556788999999 888887777655 67777654332 333445555566
Q ss_pred EEEeecCCCEEEEEe---CCCeEEEEEccCCCcccceeeccCC--CCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC-
Q 019847 149 GLKWSNEGNLLASGG---DDNVVRIWERSKMSSSKSLHRFTDH--CGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ- 222 (335)
Q Consensus 149 ~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~- 222 (335)
...+ +++.+++.+. .++.|.+||+.++... ....+..+ ...+..++|+ + ..++++.. .|+..++|.+.
T Consensus 276 ~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~l~~~~~~-~-~~lv~~~~--~dg~~~l~~~~~ 349 (695)
T 2bkl_A 276 EVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA-SWKEIVPEDSSASLLSVSIV-G-GHLSLEYL--KDATSEVRVATL 349 (695)
T ss_dssp EEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG-GCEEEECCCSSCEEEEEEEE-T-TEEEEEEE--ETTEEEEEEEET
T ss_pred EEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc-CCeEEecCCCCCeEEEEEEE-C-CEEEEEEE--ECCEEEEEEEeC
Confidence 6666 5566444443 2578999998764321 12222223 4457788887 3 35777765 78888777654
Q ss_pred CCceEEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 223 KGTCIHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 223 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
+++....+.. ...+..+.++|++..++.. +.+....+.|++||+.+++.
T Consensus 350 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~--~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 350 KGKPVRTVQLPGVGAASNLMGLEDLDDAYYV--FTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TCCEEEECCCSSSSEECCCBSCTTCSEEEEE--EEETTEEEEEEEEETTTCCE
T ss_pred CCCeeEEecCCCCeEEEEeecCCCCCEEEEE--EcCCCCCCEEEEEECCCCcE
Confidence 4555555554 3567788999999877754 22334568999999988764
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=3.5e-13 Score=109.01 Aligned_cols=242 Identities=10% Similarity=0.022 Sum_probs=170.7
Q ss_pred EeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe-eecccccceeEeeecCCCCCEEEEeeCCCcEEEEec
Q 019847 52 LQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR-NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 52 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~ 130 (335)
+.++.....+.++++.++|+..++...++.|.+||.. ++... .+......+..+++.+ +++++++...++.|..+|.
T Consensus 13 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 13 FNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred EecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECC
Confidence 3444556678999999999877777678999999987 55433 2222346788999988 8888887777889999998
Q ss_pred ccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC
Q 019847 131 RVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG 210 (335)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g 210 (335)
. +.............+..+++.++++++++...++.|..+|.. +.. . ..........+..+++.+++. ++++..
T Consensus 91 ~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~-~~~~~~~~~~~~~i~~d~~g~-l~v~~~- 164 (300)
T 2qc5_A 91 K-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI-Y-EYDLPNKGSYPAFITLGSDNA-LWFTEN- 164 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE-E-EEECSSTTCCEEEEEECTTSS-EEEEET-
T ss_pred C-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE-E-EccCCCCCCCceeEEECCCCC-EEEEec-
Confidence 7 443222222244678999999999888877768899999865 221 1 112222345688999999986 555543
Q ss_pred CCCCeEEEEECCCCceEEEeec---CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeec-ccCCCCceeE
Q 019847 211 REDGCIKIWNVQKGTCIHGIDA---KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE-LQSSNSRILD 286 (335)
Q Consensus 211 ~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~-~~~~~~~i~~ 286 (335)
.++.|..+|. +++... +.. ...+..+++++++...++. ...+.|.+|+. +++.... ...+...+.+
T Consensus 165 -~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~------~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 234 (300)
T 2qc5_A 165 -QNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVE------IMGNKIGRITT-TGEISEYDIPTPNARPHA 234 (300)
T ss_dssp -TTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEE------TTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred -CCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEc------cCCCEEEEEcC-CCcEEEEECCCCCCCceE
Confidence 5788999998 555443 322 3458899999998766544 44678999998 4443322 3334556889
Q ss_pred eEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 287 LSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 287 ~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
++++++|+++++...++.|..|+..
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEECCCCCEEEeccCCCeEEEECCC
Confidence 9999999877776667899999874
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.71 E-value=3.3e-14 Score=116.99 Aligned_cols=278 Identities=11% Similarity=0.016 Sum_probs=183.7
Q ss_pred CCceEEEec-----CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE----------CCCcEEEEeCCCc
Q 019847 26 RNNVLAVAL-----GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY----------MDSKLQLWDAETS 90 (335)
Q Consensus 26 ~~~~~~~~~-----~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~ 90 (335)
...++++.. ++.|.+.|..+++....+... ..+ . ++++|||++++++. .++.|.+||..++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG--~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC--CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 345666553 579999999999987766542 223 4 99999999988775 3578999999999
Q ss_pred eeEeeecccc-------cceeEeeecCCCCCEEEEeeC--CCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEE
Q 019847 91 KLVRNLEGHH-------RRVATSSWNHWNGHILTSGSK--DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLAS 161 (335)
Q Consensus 91 ~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (335)
+.+..+.... .....+.++| +++.++++.. ++.|.++|+.+.+.. ..+.. .+ . ...+....+.+++
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv-~tI~v-~g-~-~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFK-RMLDV-PD-C-YHIFPTAPDTFFM 194 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEE-EEEEC-CS-E-EEEEEEETTEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEE-EEEEC-CC-c-ceeecCCCceeEE
Confidence 9888875321 2567899999 8988888764 689999999976653 33322 11 1 2223334567778
Q ss_pred EeCCCeEEEEEccCCCccccee--eccCCCCCee-EEEec-CCCCcEEEEecCCCCCeEEEEECCCCc--eEEEee----
Q 019847 162 GGDDNVVRIWERSKMSSSKSLH--RFTDHCGGVK-ALAWS-PHQVNVLATGGGREDGCIKIWNVQKGT--CIHGID---- 231 (335)
Q Consensus 162 ~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~v~-~~~~~-~~~~~~~~~~~g~~d~~i~i~d~~~~~--~~~~~~---- 231 (335)
.+.||++.+.++.......... .+.....++. ...|. ++|..++ .. .+|.+++.|+.++. ....+.
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs---~~g~V~v~d~~~~~~~v~~~~~~~~~ 270 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PT---YTGKIHQIDLSSGDAKFLPAVEALTE 270 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EB---TTSEEEEEECTTSSCEECCCEESSCH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-Ee---CCCEEEEEECCCCcceeecceecccc
Confidence 8889999888876522211111 1111112222 23554 6664444 33 57999999997654 333332
Q ss_pred -------cCCcEeEEEeCCCCceeeeeeeeee-e---cCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCC-EEEEE
Q 019847 232 -------AKAQICGLEWNRHHKEILSGHGFSA-S---GDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL-TVATA 299 (335)
Q Consensus 232 -------~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 299 (335)
.......++++++++.++....--. + ...+.|.++|+.+++.+..+... .++.++++++|++ +|++.
T Consensus 271 ~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 271 AERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEE
T ss_pred ccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEE
Confidence 0123345777899888876521000 0 01367999999999999887643 3678999999996 66665
Q ss_pred -eCCCcEEEEecCCCCCCC
Q 019847 300 -GADETIRFWEAFGPSGDE 317 (335)
Q Consensus 300 -~~dg~v~iw~~~~~~~~~ 317 (335)
..++.|.++|..+.+...
T Consensus 350 n~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 350 STGDKTLYIHDAESGEELR 368 (386)
T ss_dssp ETTTTEEEEEETTTCCEEE
T ss_pred cCCCCeEEEEECCCCcEEE
Confidence 458999999999876543
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.71 E-value=6e-14 Score=118.41 Aligned_cols=238 Identities=11% Similarity=0.052 Sum_probs=164.6
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCC--cEEEEecccCCee
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK--SIINHDVRVSNNV 136 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~ 136 (335)
..+..++|+++++++++...++.|++||..+++....... ..... ++|++ +++.|+++..++ .|.+++.......
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCcee
Confidence 3578999999999777777789999999988776655443 23334 99999 888888888766 7888888755432
Q ss_pred eEEe----ecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceee--ccCCCCCe--eEEEecCCCCcEEEEe
Q 019847 137 TSCI----KAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHR--FTDHCGGV--KALAWSPHQVNVLATG 208 (335)
Q Consensus 137 ~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v--~~~~~~~~~~~~~~~~ 208 (335)
..+ ......+.+++++|++..|+.+..++.|+.||...... ..+.. ..++...- ..++|+|++..++++.
T Consensus 208 -~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 -TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp -EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred -EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 222 21445678899999555566677788999999875421 11110 11222222 3899999766788876
Q ss_pred cCCCCCeEEEEECCCCceEEEeecC---------------CcEeEEEeCCCCceeeeeeeeeeec-CCCeEEEEECCCCc
Q 019847 209 GGREDGCIKIWNVQKGTCIHGIDAK---------------AQICGLEWNRHHKEILSGHGFSASG-DGNKLCLWKYPNMT 272 (335)
Q Consensus 209 ~g~~d~~i~i~d~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~d~~~~~ 272 (335)
. .++.|+.|+.... ........ .....++++|+|...++- . .++.|+.|++.+++
T Consensus 286 ~--~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad------~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 286 Q--NLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVD------GFKGYCLRKLDILDGY 356 (409)
T ss_dssp T--TTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEE------TTTTCEEEEEETTTTE
T ss_pred C--CCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEe------CCCCCEEEEEECCCCE
Confidence 6 7899999997643 22221111 247889999999855544 5 68899999987765
Q ss_pred eeecccCC---------------CCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 273 KVGELQSS---------------NSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 273 ~~~~~~~~---------------~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
.. .+.++ -.....+++++++.++++-..+++|+.++++
T Consensus 357 v~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 357 VS-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EE-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EE-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 43 32222 2357899999999888888888899888753
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.70 E-value=4.9e-14 Score=116.01 Aligned_cols=259 Identities=11% Similarity=0.061 Sum_probs=177.5
Q ss_pred eeecCC--ceEEEe----------cCCeEEEEEecCCceeeEEeecCC-----CCCceEEEEcCCCCEEEEEEC--CCcE
Q 019847 22 IDWGRN--NVLAVA----------LGPVLFLWKWENGKVKKLLQVPGE-----DDYPTSVSWSHDAKTLAVGYM--DSKL 82 (335)
Q Consensus 22 ~~~~~~--~~~~~~----------~~~~i~vw~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--dg~i 82 (335)
+.++++ .++++. .++.|.+||..+.+....+.+... ......++|+|||++++++.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 666663 455544 257899999999998777766431 235678999999999998864 6899
Q ss_pred EEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecC----CCCEE-EEEee-cCC
Q 019847 83 QLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAH----SGEVC-GLKWS-NEG 156 (335)
Q Consensus 83 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~i~-~~~~~-~~~ 156 (335)
.++|+.+++.+..+.... . ...+ |...+.+++.+.||.+.+.++.....+......+ ..++. ...|. ++|
T Consensus 163 sVID~~t~~vv~tI~v~g-~--~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD-C--YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEETTTTEEEEEEECCS-E--EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEECCCCcEEEEEECCC-c--ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999999998885322 1 2223 4366778888899999999987633332211111 11221 23554 566
Q ss_pred CEEEEEeCCCeEEEEEccCCCcccceeecc----------CCCCCeeEEEecCCCCcEEEEecC----C---CCCeEEEE
Q 019847 157 NLLASGGDDNVVRIWERSKMSSSKSLHRFT----------DHCGGVKALAWSPHQVNVLATGGG----R---EDGCIKIW 219 (335)
Q Consensus 157 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~g----~---~d~~i~i~ 219 (335)
++++ .+.+|.|++.|+..... +....+. -..+....+.++|+++.++++... + ..+.|.++
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~~-~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~vi 316 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGDA-KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 316 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSSC-EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred cEEE-EeCCCEEEEEECCCCcc-eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEE
Confidence 5444 56689999999865321 1121111 012334457789999888886420 0 12579999
Q ss_pred ECCCCceEEEeecCCcEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCC
Q 019847 220 NVQKGTCIHGIDAKAQICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPD 292 (335)
Q Consensus 220 d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 292 (335)
|+.+++.+..+....++..+.++++++ .+++.. ..++.|.++|..+++.+.++..... -+.|.+++|
T Consensus 317 D~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn-----~~~~~VsViD~~t~k~~~~i~~~~~-p~~l~~s~d 384 (386)
T 3sjl_D 317 DAKTGERLAKFEMGHEIDSINVSQDEKPLLYALS-----TGDKTLYIHDAESGEELRSVNQLGH-GPQVITTAD 384 (386)
T ss_dssp ETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEE-----TTTTEEEEEETTTCCEEEEECCCCS-SCCEEEECC
T ss_pred ECCCCeEEEEEECCCCcceEEECCCCCeEEEEEc-----CCCCeEEEEECCCCcEEEEecCCCC-CceeEECCc
Confidence 999999999999888999999999997 555542 5689999999999999988865432 355666665
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.69 E-value=1.4e-14 Score=132.00 Aligned_cols=244 Identities=10% Similarity=0.034 Sum_probs=160.0
Q ss_pred ccceeeeecCC-ceEEEe-cC-----CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCc--------
Q 019847 17 YYSKVIDWGRN-NVLAVA-LG-----PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSK-------- 81 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~-~~-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-------- 81 (335)
..+..++|+++ +.++.+ .+ ..|++||+++++.... .. +...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE--EEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC--CCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 35678899985 444443 22 3699999999987543 11 1122357899999 99998886654
Q ss_pred ------EEEEeCCCce----eEeeecccccceeEeeecCCCCCEEEEeeCCC-----cEEEEecccCCee-eEEeecCCC
Q 019847 82 ------LQLWDAETSK----LVRNLEGHHRRVATSSWNHWNGHILTSGSKDK-----SIINHDVRVSNNV-TSCIKAHSG 145 (335)
Q Consensus 82 ------i~iw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~-~~~~~~~~~ 145 (335)
|++|++.++. .+.....+...+..+.|+| +++.|+..+.++ .|++||+.++... ...+..+..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 8999997765 2322233334588999999 888887776543 8999999865222 333444554
Q ss_pred CEEEEEeecCCCEEEEEeCC----CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEEC
Q 019847 146 EVCGLKWSNEGNLLASGGDD----NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNV 221 (335)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~ 221 (335)
.+... ++|+++.|+..+.+ +.|.+||+..+. ......+..+...+..+.++ +..++++.. .|+..++|.+
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~--~dg~~~l~~~ 391 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA--GNRLFASYI--HDAKSQVLAF 391 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE--BTEEEEEEE--ETTEEEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE--CCEEEEEEE--ECCEEEEEEE
Confidence 45444 34888888887764 459999987642 11122223344456677776 446777765 7887776654
Q ss_pred C-CCceEEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 222 Q-KGTCIHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 222 ~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
. +++....+.. ...+..+.++|++..++.. +.+....+.+++||+.+++.
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~--~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLS--FSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEE--EEETTEEEEEEEEETTTTEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEE--EcCCCCCCEEEEEECCCCcE
Confidence 3 4556666653 4568889999999877654 22234568999999988763
No 206
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.68 E-value=8.4e-13 Score=109.88 Aligned_cols=245 Identities=6% Similarity=-0.055 Sum_probs=166.9
Q ss_pred eeeecCC--ceEEEe----------cCCeEEEEEecCCceeeEEeecC--C---CCCceEEEEcCCCCEEEEEEC--CCc
Q 019847 21 VIDWGRN--NVLAVA----------LGPVLFLWKWENGKVKKLLQVPG--E---DDYPTSVSWSHDAKTLAVGYM--DSK 81 (335)
Q Consensus 21 ~~~~~~~--~~~~~~----------~~~~i~vw~~~~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~~~~~--dg~ 81 (335)
.+.++++ .++++. .++.|.+||..+.+....+.+.+ + ......++|+|||++|+++.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 5777774 344443 25789999999888766665531 0 134568999999999999874 478
Q ss_pred EEEEeCCCceeEee-ecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEe----ecCCCCE-EEEEeecC
Q 019847 82 LQLWDAETSKLVRN-LEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCI----KAHSGEV-CGLKWSNE 155 (335)
Q Consensus 82 i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~~~~i-~~~~~~~~ 155 (335)
|.++| .+++.+.. +... .. +.+.|.....+++.+.||.+.++|. +++...... .....++ ....+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~-~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-TC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-ce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99998877 6532 22 3444535567778888999999999 665432211 0111221 23456676
Q ss_pred CCEEEEEeCCCeEEEEEccCCCcccceeeccC----------CCCCeeEEEecCCCCcEEEEecCC-------CCCeEEE
Q 019847 156 GNLLASGGDDNVVRIWERSKMSSSKSLHRFTD----------HCGGVKALAWSPHQVNVLATGGGR-------EDGCIKI 218 (335)
Q Consensus 156 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~g~-------~d~~i~i 218 (335)
+..++..+.++.+.+.|+..... ..+..+.- .......+.++|+++.++++.... ..+.|.+
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~-~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGA-TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcc-eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 65555555788999999864321 11121110 122344578999998888765200 1358999
Q ss_pred EECCCCceEEEeecCCcEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCCceeecc
Q 019847 219 WNVQKGTCIHGIDAKAQICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNMTKVGEL 277 (335)
Q Consensus 219 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~ 277 (335)
+|+.+++.+..+........+.|+|+|+ .++++. ..++.|.++|..+++.+.++
T Consensus 303 ID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~-----~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 303 VTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALS-----AGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEc-----CCCCeEEEEECCCCCEEeee
Confidence 9999999999998888899999999999 565542 35899999999999998774
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.68 E-value=8e-14 Score=116.77 Aligned_cols=280 Identities=9% Similarity=-0.007 Sum_probs=187.5
Q ss_pred cCCceEEEecC-----CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE----------CCCcEEEEeCCC
Q 019847 25 GRNNVLAVALG-----PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY----------MDSKLQLWDAET 89 (335)
Q Consensus 25 ~~~~~~~~~~~-----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~ 89 (335)
.+..+++.... +.|.++|..+++....+.... .+ .++++||+++++++. .++.|.++|..+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~--~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF--LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS--SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC--CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 33455555432 699999999999887776532 33 899999999998876 367899999999
Q ss_pred ceeEeeeccc-------ccceeEeeecCCCCCEEEEeeC--CCcEEEEecccCCeeeEEeecCCCCEEEEEeecC-CCEE
Q 019847 90 SKLVRNLEGH-------HRRVATSSWNHWNGHILTSGSK--DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE-GNLL 159 (335)
Q Consensus 90 ~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l 159 (335)
++.+..+... ......+.++| ++++++++.. ++.|.+.|+.+.+.... +.- .+ . ....|+ .+.+
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~-I~v-~g-~--~~~~p~g~~~~ 232 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRM-LDV-PD-C--YHIFPASPTVF 232 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEE-EEC-CS-E--EEEEEEETTEE
T ss_pred CcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEE-EEc-CC-c--eeeccCCCcEE
Confidence 9988877532 23467889999 8988888764 57899999987665333 332 11 1 223343 3566
Q ss_pred EEEeCCCeEEEEEccCCCcccce-eeccCCCCCe-eEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE--EEeec---
Q 019847 160 ASGGDDNVVRIWERSKMSSSKSL-HRFTDHCGGV-KALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI--HGIDA--- 232 (335)
Q Consensus 160 ~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~v-~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~--~~~~~--- 232 (335)
++.+.||.+.+.++......... ..+.....++ ..+.+.+++..++.+. ..+.+.+.|+...... ..+..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s---~~g~V~ViD~~~~~~~v~~~~~~~~~ 309 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPT---YTGKIFQADLTAEGATFRAPIEALTE 309 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEB---TTSEEEEEEECSSCEEECCCEESSCT
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEe---CCCcEEEEeccCCceEEeeeeeeccc
Confidence 66777888887776332211000 1111111221 2356788888777775 5789999998765422 11111
Q ss_pred --------CCcEeEEEeCCCCceeeeeeeeee-e---cCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCC-EEEEE
Q 019847 233 --------KAQICGLEWNRHHKEILSGHGFSA-S---GDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL-TVATA 299 (335)
Q Consensus 233 --------~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 299 (335)
......+.++|+++.+++...-.. + ..++.|.++|..+.+.+.++.... ....++|+|||+ ++++.
T Consensus 310 ~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 310 AERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp TTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEE
T ss_pred cccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEE
Confidence 111223788999888776531000 0 014689999999999999886433 478999999999 88888
Q ss_pred e-CCCcEEEEecCCCCCCCC
Q 019847 300 G-ADETIRFWEAFGPSGDED 318 (335)
Q Consensus 300 ~-~dg~v~iw~~~~~~~~~~ 318 (335)
. .++.|.++|+.+.+....
T Consensus 389 n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 389 SAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp ETTTTEEEEEETTTCCEEEE
T ss_pred cCCCCeEEEEECCCCCEEEE
Confidence 7 589999999998876544
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.66 E-value=4.7e-13 Score=108.25 Aligned_cols=226 Identities=10% Similarity=0.099 Sum_probs=153.6
Q ss_pred CCCceEEEEcCCCC-EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee
Q 019847 58 DDYPTSVSWSHDAK-TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV 136 (335)
Q Consensus 58 ~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 136 (335)
..-.-+..|+|++. ++++...++.|..||..+++. ..+. ....+.++++++ +++++++ . ++.|.+||..++..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~- 85 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSA- 85 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEE-
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcE-
Confidence 34456889999655 455555788999999988765 2332 456789999999 8885554 4 56899999875442
Q ss_pred eEEeec----CCCCEEEEEeecCCCEEEEEeCC---------CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCc
Q 019847 137 TSCIKA----HSGEVCGLKWSNEGNLLASGGDD---------NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVN 203 (335)
Q Consensus 137 ~~~~~~----~~~~i~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 203 (335)
...... ....+..++++|+|+++++...+ ..-.+|.+..... ...........+.++|+|+++.
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQVDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeeccccccceEEcCCCCE
Confidence 222211 12347889999999977655322 2234555442211 1112223344678999999988
Q ss_pred EEEEecCCCCCeEEEEEC--CCCceE-----EEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceee
Q 019847 204 VLATGGGREDGCIKIWNV--QKGTCI-----HGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVG 275 (335)
Q Consensus 204 ~~~~~~g~~d~~i~i~d~--~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 275 (335)
++++.+ .++.|.+||+ .++... ..+. .......++++++|...++. ..++.|..||..+++.+.
T Consensus 163 lyv~~~--~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~------~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 163 FYYIDS--LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC------YNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp EEEEEG--GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE------ETTTEEEEECTTTCCEEE
T ss_pred EEEecC--CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE------cCCCEEEEEcCCCceEEE
Confidence 877765 6889999987 455432 1222 13467889999999766654 347889999999999988
Q ss_pred cccCCCCceeEeEEc-CCCCEEEEEe
Q 019847 276 ELQSSNSRILDLSQS-PDGLTVATAG 300 (335)
Q Consensus 276 ~~~~~~~~i~~~~~~-~~~~~l~~~~ 300 (335)
.+..+...+++++|. |+++.|+.++
T Consensus 235 ~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 235 TVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred EEECCCCCceEEEEeCCCCCEEEEEc
Confidence 888777789999998 8877665554
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.66 E-value=5.8e-13 Score=108.57 Aligned_cols=238 Identities=11% Similarity=0.159 Sum_probs=159.7
Q ss_pred ceeeeecC-CceEEE--------ecCCeEEEEEecCCceeeEEe--ecCCCCCceEEEEcCC-CCEEEEEECCCcEEEEe
Q 019847 19 SKVIDWGR-NNVLAV--------ALGPVLFLWKWENGKVKKLLQ--VPGEDDYPTSVSWSHD-AKTLAVGYMDSKLQLWD 86 (335)
Q Consensus 19 ~~~~~~~~-~~~~~~--------~~~~~i~vw~~~~~~~~~~~~--~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~ 86 (335)
...++|++ +.++++ ..++.|.+||..+++...... ..++...+.+++++++ +++++ ++..+.|.+||
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d 98 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQ 98 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEe
Confidence 45688876 456666 568899999988887643321 0124467899999999 65444 44455799999
Q ss_pred CCCceeEee-ecc----cccceeEeeecCCCCCEEEEeeCC---------------CcEEEEecccCCeeeEEeecCCCC
Q 019847 87 AETSKLVRN-LEG----HHRRVATSSWNHWNGHILTSGSKD---------------KSIINHDVRVSNNVTSCIKAHSGE 146 (335)
Q Consensus 87 ~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~l~~~~~d---------------g~i~~~d~~~~~~~~~~~~~~~~~ 146 (335)
.+ ++.... ... ....+.++++.+ +++++++...+ +.|..++.. +. ... +..+...
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~-~~~~~~~ 173 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-MIQ-VDTAFQF 173 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-EEE-EEEEESS
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-EEE-eccCCCC
Confidence 88 665433 221 124588999998 88888777655 567777754 32 222 2233445
Q ss_pred EEEEEee----cCCCEEEEE-eCCCeEEEEEccC-CCc--ccceeeccCCC-CCeeEEEecCCCCcEEEEecCCCCCeEE
Q 019847 147 VCGLKWS----NEGNLLASG-GDDNVVRIWERSK-MSS--SKSLHRFTDHC-GGVKALAWSPHQVNVLATGGGREDGCIK 217 (335)
Q Consensus 147 i~~~~~~----~~~~~l~~~-~~dg~i~iwd~~~-~~~--~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~g~~d~~i~ 217 (335)
...++++ |+++.++.+ ..++.|.+||++. +.. ......+..+. ..+..++++++|. ++++.. .++.|.
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~--~~~~i~ 250 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANW--GSSHIE 250 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEE--TTTEEE
T ss_pred cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEc--CCCEEE
Confidence 6889999 998765555 4678999999762 211 11223333333 5678899999985 555443 578999
Q ss_pred EEECCCCceEEEeecC-CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC
Q 019847 218 IWNVQKGTCIHGIDAK-AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 218 i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
+||.++++.+..+..+ ..+.+++++|+++.+..+. ..++.|..|++..
T Consensus 251 ~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~-----~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTE-----HENNAVWKFEWQR 299 (314)
T ss_dssp EECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEE-----TTTTEEEEEECSS
T ss_pred EEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEe-----CCCCeEEEEeCCC
Confidence 9999877776666654 6789999999998665442 4567999999864
No 210
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.65 E-value=4.9e-15 Score=122.38 Aligned_cols=175 Identities=13% Similarity=0.042 Sum_probs=128.9
Q ss_pred cceeeeecCC-ceEEEecCCeEEEEEecCCc---------eeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 18 YSKVIDWGRN-NVLAVALGPVLFLWKWENGK---------VKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
.++.+++++. ++++++....+.+|+++..+ ..+.... .+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 4778888874 56666666688889976443 2221222 2455 999999 99999999 8899999999
Q ss_pred CCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCe
Q 019847 88 ETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
.+.........+..++.++.+.+. .+++++.||.+.+||+.+... .. +...|++++|+|+| ++.|..||+
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~-~~----~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKST-KQ----LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCE-EE----EEESEEEEEECSSE--EEEEETTSC
T ss_pred hhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcc-cc----ccCCceEEEEcCCc--eEEEEcCCc
Confidence 877666666677788888888762 288899999999999986554 22 34589999999999 778999999
Q ss_pred EEEEEccCCCcccceeec------c---CCCCCeeEEEecCCCCcEEEEe
Q 019847 168 VRIWERSKMSSSKSLHRF------T---DHCGGVKALAWSPHQVNVLATG 208 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~------~---~~~~~v~~~~~~~~~~~~~~~~ 208 (335)
+++|+....... ....+ . +|...|.++.|.+++.++++-.
T Consensus 184 i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 184 FQSFAWRNGEME-KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEEEEETTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EEEEcCCCcccc-ccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999987654310 01122 2 3678899999999886665543
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.64 E-value=6.7e-14 Score=126.42 Aligned_cols=245 Identities=11% Similarity=0.093 Sum_probs=159.3
Q ss_pred CCCCCceEEEEcCCCCEEEEEE-----CCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCC-------
Q 019847 56 GEDDYPTSVSWSHDAKTLAVGY-----MDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK------- 123 (335)
Q Consensus 56 ~~~~~v~~~~~~~~~~~l~~~~-----~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------- 123 (335)
+|...+..++|||||++||.+. ....|++||+.+++.+.... .......++|+ +++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL--GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE--TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe--CCCEEEEEEecCccccccc
Confidence 3556788899999999998653 22579999999998655311 11124678898 666666666653
Q ss_pred ------cEEEEecccCCe---eeEEeec-CCCCEEEEEeecCCCEEEEEeC----CCeEEEEEccCCCcccceeeccCCC
Q 019847 124 ------SIINHDVRVSNN---VTSCIKA-HSGEVCGLKWSNEGNLLASGGD----DNVVRIWERSKMSSSKSLHRFTDHC 189 (335)
Q Consensus 124 ------~i~~~d~~~~~~---~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~ 189 (335)
.|++|++.+... ++..... |......+.|+||+++|+.... +..|+++|+..+.. ....+..+.
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~~~~l~~~~ 280 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--PLLTVQGDL 280 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--CCEEEECSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--ceEEEeCCC
Confidence 499999876543 2222222 3455788999999998866543 24899999876431 233344455
Q ss_pred CCeeEEEecCCCCcEEEEecC-CCCCeEEEEECCCCce--EEEe-ecCCcEeEEEeCCCCceeeeeeeeeeecCCC--eE
Q 019847 190 GGVKALAWSPHQVNVLATGGG-REDGCIKIWNVQKGTC--IHGI-DAKAQICGLEWNRHHKEILSGHGFSASGDGN--KL 263 (335)
Q Consensus 190 ~~v~~~~~~~~~~~~~~~~~g-~~d~~i~i~d~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i 263 (335)
...... +++++..+++.... ...+.|..+|+.++.. ...+ .+...+. .|+++++.++... ..++ .|
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~-----~~~g~~~l 352 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEY-----MVDATARV 352 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEE-----EETTEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEE-----EECCeeEE
Confidence 555444 67777777776541 1246899999988654 2233 3333333 8899998887653 2233 68
Q ss_pred EEEECCCCceeeccc-CCCCceeEeEEcCCCCEEEEEeCC----CcEEEEecCCCC
Q 019847 264 CLWKYPNMTKVGELQ-SSNSRILDLSQSPDGLTVATAGAD----ETIRFWEAFGPS 314 (335)
Q Consensus 264 ~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d----g~v~iw~~~~~~ 314 (335)
++|++..+. ...+. ...+.+..+.+++++..|+....+ +.+..||+.+++
T Consensus 353 ~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 353 EQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 899987544 33333 344567788889888777655444 789999987653
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.62 E-value=2.4e-14 Score=118.32 Aligned_cols=173 Identities=8% Similarity=0.038 Sum_probs=129.2
Q ss_pred ceeEeeecCCCCCEEEEeeCCCcEEEEecccCC---------eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEE
Q 019847 102 RVATSSWNHWNGHILTSGSKDKSIINHDVRVSN---------NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWE 172 (335)
Q Consensus 102 ~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 172 (335)
++..+++++ ...++++|+.++ +.+|++.... ........+.. |+.++| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 688999999 888999999875 5559875432 01112234666 999999 88999999 789999999
Q ss_pred ccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeee
Q 019847 173 RSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGH 252 (335)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (335)
+++..... ....+..++.++.+.+.. +++.. .||.+.+||+.+++... ....+.+++|+|+| ++.|
T Consensus 113 v~sl~~~~---~~~~~~~~v~~i~~~~p~--~av~~---~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg- 178 (388)
T 1xip_A 113 LEELSEFR---TVTSFEKPVFQLKNVNNT--LVILN---SVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVL- 178 (388)
T ss_dssp SSSTTCEE---EEEECSSCEEEEEECSSE--EEEEE---TTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEE-
T ss_pred chhhhccC---ccceeecceeeEEecCCC--EEEEE---CCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEE-
Confidence 88765333 334466778888777653 44443 79999999999887653 34589999999999 3444
Q ss_pred eeeeecCCCeEEEEECCCCce--eecc------c---CCCCceeEeEEcCCCCEEEEE
Q 019847 253 GFSASGDGNKLCLWKYPNMTK--VGEL------Q---SSNSRILDLSQSPDGLTVATA 299 (335)
Q Consensus 253 ~~~~~~~~~~i~i~d~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~~~ 299 (335)
..||.+++|+....+. ..++ . +|...|.++.|.+++.++++-
T Consensus 179 -----~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 179 -----LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp -----ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred -----EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 4599999998877664 4444 2 367889999999999988874
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.62 E-value=2e-12 Score=105.94 Aligned_cols=220 Identities=7% Similarity=0.001 Sum_probs=147.8
Q ss_pred ceEEEEcCCCC-EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE
Q 019847 61 PTSVSWSHDAK-TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC 139 (335)
Q Consensus 61 v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 139 (335)
..+..|+|++. ++++...++.|..||..+++.. .+. ....+.++.+++ +++++++. .+ .|.+||..++.. ...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~-~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVL-TLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCE-EEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcE-EEE
Confidence 46788999755 4555557889999999887643 232 346789999998 78777654 44 499999876553 222
Q ss_pred eec---C-CCCEEEEEeecCCCEEEEEeC------CCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEec
Q 019847 140 IKA---H-SGEVCGLKWSNEGNLLASGGD------DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGG 209 (335)
Q Consensus 140 ~~~---~-~~~i~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 209 (335)
... . ...+..++++|+|+++++... .+.|..++ .+ . +..+.........++|+|+++.++++..
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g-~---~~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KG-K---VTKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TT-E---EEEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CC-c---EEEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 111 1 235889999999997765542 24555555 22 1 1222222334678999999987777765
Q ss_pred CCCCCeEEEEECC--CC-ce-----EEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC
Q 019847 210 GREDGCIKIWNVQ--KG-TC-----IHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS 280 (335)
Q Consensus 210 g~~d~~i~i~d~~--~~-~~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 280 (335)
.++.|.+||+. ++ +. ...+. .......++++++|...++. ..++.|..||. +++.+..+..+
T Consensus 199 --~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~------~~~~~v~~~d~-~g~~~~~i~~~ 269 (326)
T 2ghs_A 199 --KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNAR------WGEGAVDRYDT-DGNHIARYEVP 269 (326)
T ss_dssp --TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEE------ETTTEEEEECT-TCCEEEEEECS
T ss_pred --CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEE------eCCCEEEEECC-CCCEEEEEECC
Confidence 67899999986 55 32 22222 23456789999999766654 34678999998 67777777766
Q ss_pred CCceeEeEEc-CCCCEEEEEeC
Q 019847 281 NSRILDLSQS-PDGLTVATAGA 301 (335)
Q Consensus 281 ~~~i~~~~~~-~~~~~l~~~~~ 301 (335)
...+++++|+ ++++.|+.++.
T Consensus 270 ~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 270 GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp CSBEEEEEEESTTSCEEEEEEB
T ss_pred CCCcEEEEEecCCCCEEEEEec
Confidence 6679999998 88776655543
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.61 E-value=5.5e-13 Score=111.73 Aligned_cols=247 Identities=9% Similarity=0.026 Sum_probs=170.5
Q ss_pred eeeecCC--ceEEEe----------cCCeEEEEEecCCceeeEEeecCC-----CCCceEEEEcCCCCEEEEEEC--CCc
Q 019847 21 VIDWGRN--NVLAVA----------LGPVLFLWKWENGKVKKLLQVPGE-----DDYPTSVSWSHDAKTLAVGYM--DSK 81 (335)
Q Consensus 21 ~~~~~~~--~~~~~~----------~~~~i~vw~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--dg~ 81 (335)
.+.++++ .++++. .++.|.++|..+++....+.+.+. ......++|+|||++++++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 4666763 455554 367899999999998777766411 234678999999999999874 578
Q ss_pred EEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeE---EeecCCCCE-EEEEeecCCC
Q 019847 82 LQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS---CIKAHSGEV-CGLKWSNEGN 157 (335)
Q Consensus 82 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~i-~~~~~~~~~~ 157 (335)
|.+.|+.+++.+..+..... ....|.....+++.+.||.+.+.+...++.... .+.....++ ..+.+.+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 99999999999888764221 223332446677777888888888843332211 111111111 2356788888
Q ss_pred EEEEEeCCCeEEEEEccCCCcccceeecc----------CCCCCeeEEEecCCCCcEEEEecC----C---CCCeEEEEE
Q 019847 158 LLASGGDDNVVRIWERSKMSSSKSLHRFT----------DHCGGVKALAWSPHQVNVLATGGG----R---EDGCIKIWN 220 (335)
Q Consensus 158 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~~~~~~g----~---~d~~i~i~d 220 (335)
.++..+..+.+.+.|+..... ..+..+. ........+.++|++++++++... + .++.|.++|
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~-~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGA-TFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCE-EECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred EEEEEeCCCcEEEEeccCCce-EEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 888888889999999864321 1111100 011222347899999888887420 0 135799999
Q ss_pred CCCCceEEEeecCCcEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCCceeecc
Q 019847 221 VQKGTCIHGIDAKAQICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNMTKVGEL 277 (335)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~ 277 (335)
+.+.+.+..+........+.|+|+++ .+++.. ..++.|.++|..+++.+.++
T Consensus 357 ~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n-----~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIELGHEIDSINVSQDAEPLLYALS-----AGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEEEEEECEEEECCSSSCEEEEEE-----TTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEECCCCcCeEEEccCCCEEEEEEc-----CCCCeEEEEECCCCCEEEEe
Confidence 99999999999888899999999999 776653 45899999999999999886
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.59 E-value=6.1e-12 Score=101.73 Aligned_cols=222 Identities=11% Similarity=0.103 Sum_probs=149.3
Q ss_pred ceeeeecC--CceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee
Q 019847 19 SKVIDWGR--NNVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN 95 (335)
Q Consensus 19 ~~~~~~~~--~~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 95 (335)
.....|++ +.++.+. .++.|+.||.++++.. .+. ....+.+++++|+|+++++ . ++.|.+||.++++....
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~---~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT---MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE---CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe---CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEE
Confidence 34577876 4455554 5789999999887753 233 2457899999999995554 4 56799999988765433
Q ss_pred ecc----cccceeEeeecCCCCCEEEEeeCC---------CcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEE-
Q 019847 96 LEG----HHRRVATSSWNHWNGHILTSGSKD---------KSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLAS- 161 (335)
Q Consensus 96 ~~~----~~~~v~~~~~~~~~~~~l~~~~~d---------g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~- 161 (335)
... ....+..+++.| +++++++.... ..-.+|.+........ ..........++|+|+++.|+.
T Consensus 89 ~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEe
Confidence 221 124578899999 88877654322 2345555543333222 2233445688999999987654
Q ss_pred EeCCCeEEEEEcc--CCCc--ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcE
Q 019847 162 GGDDNVVRIWERS--KMSS--SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQI 236 (335)
Q Consensus 162 ~~~dg~i~iwd~~--~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~ 236 (335)
.+.++.|.+||+. ++.. .+.+..+..+...+..++++++|. +.++.. ..+.|..||..+++.+..+..+ ..+
T Consensus 167 ~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~--~~~~v~~~d~~tG~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACY--NGGRVIRLDPVTGKRLQTVKLPVDKT 243 (297)
T ss_dssp EGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEE--TTTEEEEECTTTCCEEEEEECSSSBE
T ss_pred cCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEc--CCCEEEEEcCCCceEEEEEECCCCCc
Confidence 4557899999974 2211 112223333345678999999995 555543 5788999999999999888876 579
Q ss_pred eEEEeC-CCCceeeee
Q 019847 237 CGLEWN-RHHKEILSG 251 (335)
Q Consensus 237 ~~~~~~-~~~~~~~~~ 251 (335)
++++|. |+++.|++.
T Consensus 244 t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEEEEESGGGCEEEEE
T ss_pred eEEEEeCCCCCEEEEE
Confidence 999998 888777654
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.58 E-value=2.2e-12 Score=104.78 Aligned_cols=227 Identities=10% Similarity=0.128 Sum_probs=152.5
Q ss_pred CCCCceEEEEcCCCC-EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe
Q 019847 57 EDDYPTSVSWSHDAK-TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN 135 (335)
Q Consensus 57 ~~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 135 (335)
.........|+|+++ +++++..++.|..|+. +++ ...+..+...+..+.+.+ +++++++...++.|..|+.. +..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCE
Confidence 445567899999998 5566667889999997 454 344555667789999999 88877766666889999975 332
Q ss_pred eeEEeecC----CCCEEEEEeecCCCEEEE----EeC-------------CCeEEEEEccCCCcccceeeccCCCCCeeE
Q 019847 136 VTSCIKAH----SGEVCGLKWSNEGNLLAS----GGD-------------DNVVRIWERSKMSSSKSLHRFTDHCGGVKA 194 (335)
Q Consensus 136 ~~~~~~~~----~~~i~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 194 (335)
....... ...+..+++.|+|+++++ |.. .+.|..+|..++.. ..+ . .......
T Consensus 119 -~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~~~---~-~~~~p~g 192 (305)
T 3dr2_A 119 -HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-QRM---A-DLDHPNG 192 (305)
T ss_dssp -EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-EEE---E-EESSEEE
T ss_pred -EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-EEE---e-cCCCCcc
Confidence 2211111 134667999999998886 331 24677777644322 111 1 2345678
Q ss_pred EEecCCCCcEEEEecCCC-----CCeEEEEECCCCceE--EEee--cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEE
Q 019847 195 LAWSPHQVNVLATGGGRE-----DGCIKIWNVQKGTCI--HGID--AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCL 265 (335)
Q Consensus 195 ~~~~~~~~~~~~~~~g~~-----d~~i~i~d~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 265 (335)
++|+|+++.++++.. . ++.|.+|++..+... ..+. .......++++++|+..++. .+.|.+
T Consensus 193 l~~spdg~~lyv~~~--~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--------~~gv~~ 262 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQT--PEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--------GTGVCV 262 (305)
T ss_dssp EEECTTSSEEEEEEC--CC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--------SSEEEE
T ss_pred eEEcCCCCEEEEEec--CCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--------CCcEEE
Confidence 999999987777653 2 278999998765411 1111 12345678899999855432 456999
Q ss_pred EECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcE
Q 019847 266 WKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETI 305 (335)
Q Consensus 266 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 305 (335)
|+. .++.+..+..+. .+..++|+++++.|..++.++..
T Consensus 263 ~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 263 FDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp ECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEE
T ss_pred ECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEE
Confidence 997 567776666555 58899999999888888776433
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=8.8e-12 Score=105.18 Aligned_cols=232 Identities=10% Similarity=0.026 Sum_probs=152.1
Q ss_pred cceeeeecCC-ceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCC--cEEEEeCCCceeE
Q 019847 18 YSKVIDWGRN-NVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDS--KLQLWDAETSKLV 93 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~ 93 (335)
....++|+++ .++++. .++.|++||.++++....... ..... ++|+|+++.|+++..++ .|.+++...+...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG---FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET---CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc---CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCcee
Confidence 4567888774 455554 458999999988876554432 22334 99999999999888766 7888887765443
Q ss_pred eee----cccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE---eecCCCCE--EEEEeecC-CCEEEEEe
Q 019847 94 RNL----EGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC---IKAHSGEV--CGLKWSNE-GNLLASGG 163 (335)
Q Consensus 94 ~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~---~~~~~~~i--~~~~~~~~-~~~l~~~~ 163 (335)
..+ ......+.+++++| ++..|+.+..++.|+.||..+....... ..++...- ..++|+|+ +.++++-.
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EEeeeccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 333 22456788999998 4455555777889999998765432210 11222222 38999995 66666666
Q ss_pred CCCeEEEEEccCCCcccceeeccCC---------------CCCeeEEEecCCCCcEEEEecCC-CCCeEEEEECCCCceE
Q 019847 164 DDNVVRIWERSKMSSSKSLHRFTDH---------------CGGVKALAWSPHQVNVLATGGGR-EDGCIKIWNVQKGTCI 227 (335)
Q Consensus 164 ~dg~i~iwd~~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~g~-~d~~i~i~d~~~~~~~ 227 (335)
.++.|+.|+.... +..+.++ -.....++++|++. ++++. . .++.|+.||+.+++..
T Consensus 287 ~~~~I~~~~~~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad--~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 287 NLSSVYKITPDGE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVD--GFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp TTTEEEEECTTCC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEE--TTTTCEEEEEETTTTEEE
T ss_pred CCCEEEEEecCCC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEe--CCCCCEEEEEECCCCEEE
Confidence 7789999986532 1122111 13478999999996 55543 2 4789999998877654
Q ss_pred EEeec---------------CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEEC
Q 019847 228 HGIDA---------------KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKY 268 (335)
Q Consensus 228 ~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~ 268 (335)
..... -.....+++++++..+++. ..++.|+.+++
T Consensus 359 ~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad------~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE------AWGKAIRKYAV 408 (409)
T ss_dssp EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE------STTCEEEEEEE
T ss_pred EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE------CCCCeEEEEEe
Confidence 33322 1347788999887665554 45677776654
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.55 E-value=6.9e-12 Score=103.42 Aligned_cols=251 Identities=8% Similarity=-0.100 Sum_probs=161.9
Q ss_pred cCCceEEEe-cCC----eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE----------CCCcEEEEeCCC
Q 019847 25 GRNNVLAVA-LGP----VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY----------MDSKLQLWDAET 89 (335)
Q Consensus 25 ~~~~~~~~~-~~~----~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~ 89 (335)
.+.++++.. .++ .|.++|..+++.+..+.... .+ .+.++||+++++++. .++.|.+||+.+
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 334444444 344 88899999999887766532 33 799999999998886 367899999999
Q ss_pred ceeEeeeccc-------ccceeEeeecCCCCCEEEEeeC--CCcEEE--EecccCCeeeEEeecC---------------
Q 019847 90 SKLVRNLEGH-------HRRVATSSWNHWNGHILTSGSK--DKSIIN--HDVRVSNNVTSCIKAH--------------- 143 (335)
Q Consensus 90 ~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~--dg~i~~--~d~~~~~~~~~~~~~~--------------- 143 (335)
++.+.++... ......+.++| ++++++++.. +..+.+ +|..+ ....-.+.
T Consensus 106 ~~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 106 FLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLG 181 (368)
T ss_dssp CCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECC
T ss_pred CCEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEE
Confidence 9999988643 13467899999 8888888764 457888 88865 11110000
Q ss_pred --CCCEEEEEe--------------------------ecCCCEEEEEeCCCeEEEEEccCCCcccceeeccC--------
Q 019847 144 --SGEVCGLKW--------------------------SNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTD-------- 187 (335)
Q Consensus 144 --~~~i~~~~~--------------------------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------- 187 (335)
.+.+..+.. .+++..++..+. +.+.+.|+.... .+.+..+.-
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~-~~v~~~~~~~~~~~~~~ 259 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAG-ATMKAAIDGNESGRKAD 259 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSC-CEEECCCCSSCTHHHHT
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCc-ceEEEEEEecccccccc
Confidence 000000000 222333333333 556666654211 011111100
Q ss_pred --CCCCeeEEEecCCCCcEEEEecCC-C-----CCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeec-
Q 019847 188 --HCGGVKALAWSPHQVNVLATGGGR-E-----DGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASG- 258 (335)
Q Consensus 188 --~~~~v~~~~~~~~~~~~~~~~~g~-~-----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 258 (335)
.......+.++|++++++++.... . ++.+.++|+.+.+.+..+..+.....+.++|+++.++... .
T Consensus 260 ~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~-----~~ 334 (368)
T 1mda_H 260 NFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYAN-----SA 334 (368)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEE-----ET
T ss_pred ccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEc-----cC
Confidence 011122268999998888764200 0 2356699999999999998888899999999998765442 4
Q ss_pred CCCeEEEEECCCCceeecccCCCCceeEeEEcC
Q 019847 259 DGNKLCLWKYPNMTKVGELQSSNSRILDLSQSP 291 (335)
Q Consensus 259 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~ 291 (335)
.++.|.++|+.+++.+.++..... ...+++.+
T Consensus 335 ~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 335 GTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp TTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred CCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 589999999999999999876554 34565544
No 219
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.55 E-value=6.6e-12 Score=112.65 Aligned_cols=283 Identities=11% Similarity=0.075 Sum_probs=182.7
Q ss_pred eeeecCCceEEEecCCeEEEEEecCCceeeEEeec-CCC--CCceE-EEEcCCCCEEEEEEC------CCcEEEEeCCCc
Q 019847 21 VIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVP-GED--DYPTS-VSWSHDAKTLAVGYM------DSKLQLWDAETS 90 (335)
Q Consensus 21 ~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~-~~~--~~v~~-~~~~~~~~~l~~~~~------dg~i~iw~~~~~ 90 (335)
.+...++.+++++.|+.|..+|..+|+..-.+... ... ..+.. ... .+..+++++. +|.|+.+|.++|
T Consensus 123 ~~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 123 GVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp CCEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred CceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCC
Confidence 34556678888889999999999999986655543 110 11111 111 2445666553 689999999999
Q ss_pred eeEeeecccccc--------------------------------eeEeeecCCCCCEEEEeeCCC---------------
Q 019847 91 KLVRNLEGHHRR--------------------------------VATSSWNHWNGHILTSGSKDK--------------- 123 (335)
Q Consensus 91 ~~~~~~~~~~~~--------------------------------v~~~~~~~~~~~~l~~~~~dg--------------- 123 (335)
+.+..+...... ...+++.+ +..+++.+..++
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~ 279 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDN 279 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCC
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCC
Confidence 988776532211 12467777 777888777664
Q ss_pred ----cEEEEecccCCeeeEEeec-CC-------CCEEEEEeecCC---CEEEEEeCCCeEEEEEccCCCcccceeecc--
Q 019847 124 ----SIINHDVRVSNNVTSCIKA-HS-------GEVCGLKWSNEG---NLLASGGDDNVVRIWERSKMSSSKSLHRFT-- 186 (335)
Q Consensus 124 ----~i~~~d~~~~~~~~~~~~~-~~-------~~i~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-- 186 (335)
.|..+|.++++..-..... |. ....-+....+| ..++.++.+|.++++|.++++.......-.
T Consensus 280 ~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~ 359 (677)
T 1kb0_A 280 LYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVN 359 (677)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCS
T ss_pred eeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccC
Confidence 4999999988765443222 21 122223333467 688999999999999987754321111000
Q ss_pred ------CCCCCe------------------------eEEEecCCCCcEEEEec--------------C------------
Q 019847 187 ------DHCGGV------------------------KALAWSPHQVNVLATGG--------------G------------ 210 (335)
Q Consensus 187 ------~~~~~v------------------------~~~~~~~~~~~~~~~~~--------------g------------ 210 (335)
....++ ..++++|+...+++... |
T Consensus 360 ~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 439 (677)
T 1kb0_A 360 WASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTG 439 (677)
T ss_dssp SEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGT
T ss_pred cccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccc
Confidence 000000 25678888765555321 0
Q ss_pred --------------CCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeec
Q 019847 211 --------------REDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE 276 (335)
Q Consensus 211 --------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 276 (335)
...+.|..||+.+++.+..++...+.....+...+..++.+ +.++.+++||..+++.+.+
T Consensus 440 ~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g------~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 440 WNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQG------TADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp CCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE------CTTSEEEEEETTTCCEEEE
T ss_pred cccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEE------CCCCcEEEEECCCCceeee
Confidence 01278999999999999888877666666666677766665 6799999999999999988
Q ss_pred ccCCCC-ceeEeEEcCCCCEEEEE-eC----------------CCcEEEEecCC
Q 019847 277 LQSSNS-RILDLSQSPDGLTVATA-GA----------------DETIRFWEAFG 312 (335)
Q Consensus 277 ~~~~~~-~i~~~~~~~~~~~l~~~-~~----------------dg~v~iw~~~~ 312 (335)
+....+ .-.-+.+..+|+.+++. +. .+.+..|.+..
T Consensus 514 ~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 514 APTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred eeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 874432 23445667888644432 22 36788888874
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.55 E-value=3e-11 Score=100.24 Aligned_cols=254 Identities=16% Similarity=0.161 Sum_probs=166.1
Q ss_pred eEEEEEecC-----CceeeEEeecCCCCCceEEEE-----------c--CCCCEEEEEE-CCCcEEEEeCCCc----eeE
Q 019847 37 VLFLWKWEN-----GKVKKLLQVPGEDDYPTSVSW-----------S--HDAKTLAVGY-MDSKLQLWDAETS----KLV 93 (335)
Q Consensus 37 ~i~vw~~~~-----~~~~~~~~~~~~~~~v~~~~~-----------~--~~~~~l~~~~-~dg~i~iw~~~~~----~~~ 93 (335)
.+.+.|++. ++.+....++.-.+....+.| + +++++|++.+ .++.|.++|+.+. +..
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~ 123 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKII 123 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEE
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceee
Confidence 688888876 777777777654445555556 6 7888887655 6789999999755 666
Q ss_pred eeec-------ccccceeEeeecCCCCCEEEEeeCC------CcEEEEecccCCeeeEEeec-CC-CCEEEEEeecCCCE
Q 019847 94 RNLE-------GHHRRVATSSWNHWNGHILTSGSKD------KSIINHDVRVSNNVTSCIKA-HS-GEVCGLKWSNEGNL 158 (335)
Q Consensus 94 ~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~ 158 (335)
+.++ ........+...| ++ +++++..+ |.+.++|.++.+.+.....+ .. .--..+.|+|+++.
T Consensus 124 k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~ 201 (462)
T 2ece_A 124 KVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEV 201 (462)
T ss_dssp EEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTE
T ss_pred eeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCE
Confidence 6663 1112455677788 77 77776655 78999999876654333212 11 22346888999998
Q ss_pred EEEEe-------------------CCCeEEEEEccCCCcccceeeccCC-C-CCeeEEEe--cCCCCcEEEEec---CCC
Q 019847 159 LASGG-------------------DDNVVRIWERSKMSSSKSLHRFTDH-C-GGVKALAW--SPHQVNVLATGG---GRE 212 (335)
Q Consensus 159 l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~-~-~~v~~~~~--~~~~~~~~~~~~---g~~ 212 (335)
+++.. .+.+|.+||+.+. +.+.++... . .....+.| +|++++.++++. ...
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~---k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L 278 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR---KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDL 278 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT---EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTC
T ss_pred EEEccCcCccccccccchhhhhhccCCEEEEEECCCC---cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCC
Confidence 88874 3689999998864 334444322 1 22344545 999987776641 003
Q ss_pred CCeEEEEECCCCce--EEEe--ec-----------------CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC-
Q 019847 213 DGCIKIWNVQKGTC--IHGI--DA-----------------KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN- 270 (335)
Q Consensus 213 d~~i~i~d~~~~~~--~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~- 270 (335)
+++|.+|....++. .+.+ .. ......+.++++|++|.++. ...+.|.+||+..
T Consensus 279 ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSn-----rg~d~VavfdV~d~ 353 (462)
T 2ece_A 279 SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSL-----WGIGEVRQYDISNP 353 (462)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEE-----TTTTEEEEEECSST
T ss_pred CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEe-----CCCCEEEEEEecCC
Confidence 56787766554422 1111 11 23467899999999998764 5578999999853
Q ss_pred --CceeecccCCC--------------CceeEeEEcCCCCEEEEEe
Q 019847 271 --MTKVGELQSSN--------------SRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 271 --~~~~~~~~~~~--------------~~i~~~~~~~~~~~l~~~~ 300 (335)
.+.+..+.... +.-..++++|||++|+++.
T Consensus 354 ~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 354 FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 34444443220 1357899999999999988
No 221
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.54 E-value=9.4e-11 Score=93.17 Aligned_cols=250 Identities=8% Similarity=0.008 Sum_probs=160.4
Q ss_pred EEEecCCeEEEEEecCCcee-----eEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCceeEeeecccccce
Q 019847 30 LAVALGPVLFLWKWENGKVK-----KLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKLVRNLEGHHRRV 103 (335)
Q Consensus 30 ~~~~~~~~i~vw~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~v 103 (335)
+..+..+.|+.++++..... .....+ ...+..++|+++++.|..+. .++.|..+++........+.......
T Consensus 4 l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~--~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 4 LLFAQTGKIERLPLERNTMKKTEAKAFLHIP--AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEEEEEEEEESSSCBCGGGCEEEEEEE--EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEcCCeEEEEEecCcccccccceeeecCC--CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 33334568999998765432 122211 23468999999776666554 57899999987655433333233567
Q ss_pred eEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC---CCeEEEEEccCCCccc
Q 019847 104 ATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD---DNVVRIWERSKMSSSK 180 (335)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~ 180 (335)
..+++.+..+.++++-...+.|.++++..... .............++++|++..|..+.. .+.|..+++... ..+
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~ 159 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRR 159 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcE
Confidence 89999983455666666678999999874332 2222222256789999997666655554 368888887632 212
Q ss_pred ceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCC
Q 019847 181 SLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDG 260 (335)
Q Consensus 181 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (335)
.+. .........++++|++..++++.. ..+.|..+|+........+........++.. +..++.. ....
T Consensus 160 ~~~--~~~~~~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva-----~~~~ 228 (267)
T 1npe_A 160 ILA--QDNLGLPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYT-----DWKT 228 (267)
T ss_dssp EEE--CTTCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEE-----ETTT
T ss_pred EEE--ECCCCCCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEE-----ECCC
Confidence 221 122345789999998888888876 6789999999765444344433344566654 3444333 2457
Q ss_pred CeEEEEECCCCceeecccCCC-CceeEeEEcCCCC
Q 019847 261 NKLCLWKYPNMTKVGELQSSN-SRILDLSQSPDGL 294 (335)
Q Consensus 261 ~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~ 294 (335)
+.|..+|..+++.+..+.... .....+++.|++.
T Consensus 229 ~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred CeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 899999999999888876543 2467888888764
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.53 E-value=4.7e-11 Score=99.89 Aligned_cols=263 Identities=7% Similarity=0.018 Sum_probs=164.4
Q ss_pred eeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccc
Q 019847 21 VIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHH 100 (335)
Q Consensus 21 ~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 100 (335)
.....++.+++++.++.|..+|.++++..-........ ...... .+..+++++.++.|..+|..+++.+.......
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 34456678888889999999999999976655543321 111122 24578888899999999999999887765432
Q ss_pred cce-----eEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCC------EEEEEeec--CCCEEEEEeCCCe
Q 019847 101 RRV-----ATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGE------VCGLKWSN--EGNLLASGGDDNV 167 (335)
Q Consensus 101 ~~v-----~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~------i~~~~~~~--~~~~l~~~~~dg~ 167 (335)
... ..... .+..++.+..++.+..+|..+++............ +..+.-.| .+..++.++.++.
T Consensus 174 ~~~~~~~~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~ 250 (376)
T 3q7m_A 174 PSLSLRGESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN 250 (376)
T ss_dssp -----CCCCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC
T ss_pred CceeecCCCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE
Confidence 211 22222 24567888889999999998777644432211100 00011112 3467778888999
Q ss_pred EEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CC-cEeEEEeCCCC
Q 019847 168 VRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KA-QICGLEWNRHH 245 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~-~~~~~~~~~~~ 245 (335)
+..+|.++++. +.... ......+... +..+++.. .++.+..+|..+++.+...+. .. ....... .+
T Consensus 251 l~~~d~~tG~~---~w~~~--~~~~~~~~~~--~~~l~~~~---~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~ 318 (376)
T 3q7m_A 251 LTALDLRSGQI---MWKRE--LGSVNDFIVD--GNRIYLVD---QNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YN 318 (376)
T ss_dssp EEEEETTTCCE---EEEEC--CCCEEEEEEE--TTEEEEEE---TTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ET
T ss_pred EEEEECCCCcE---Eeecc--CCCCCCceEE--CCEEEEEc---CCCeEEEEECCCCcEEEeecccCCCcccCCEE--EC
Confidence 99999876532 32222 2234444443 33555554 689999999999998776652 11 2222222 12
Q ss_pred ceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEe
Q 019847 246 KEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWE 309 (335)
Q Consensus 246 ~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~ 309 (335)
..++.+ +.+|.+..+|..+++.+.........+....... +..|+.++.+|.|..|+
T Consensus 319 ~~l~v~------~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~-~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 319 GNLVVG------DSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA-DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TEEEEE------CTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE-TTEEEEEBTTSCEEEEE
T ss_pred CEEEEE------eCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE-CCEEEEEeCCCEEEEEe
Confidence 334433 6689999999999998877665333333222222 34678889999999986
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.53 E-value=6.5e-12 Score=112.67 Aligned_cols=286 Identities=12% Similarity=0.018 Sum_probs=183.6
Q ss_pred CCceEEEecCCeEEEEEecCCceeeEEeecCCCC---------CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeee
Q 019847 26 RNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDD---------YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNL 96 (335)
Q Consensus 26 ~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 96 (335)
++.+++++.++.|+-+|..+|+.+-.+....... ....+++ ++..+++++.|+.|..+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 4567777788999999999998766555432110 0112333 4668888999999999999999998887
Q ss_pred ccc-c----cceeEeeecCCCCCEEEEeeC------CCcEEEEecccCCeeeEEeecCCC--------------------
Q 019847 97 EGH-H----RRVATSSWNHWNGHILTSGSK------DKSIINHDVRVSNNVTSCIKAHSG-------------------- 145 (335)
Q Consensus 97 ~~~-~----~~v~~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~-------------------- 145 (335)
... . ..+..--.. .+..++.++. ++.|+.+|.++++.+-+.......
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 654 1 112211111 2345555543 689999999988765443221111
Q ss_pred -----------CEEEEEeecCCCEEEEEeCCC-------------------eEEEEEccCCCcccceeeccCCC------
Q 019847 146 -----------EVCGLKWSNEGNLLASGGDDN-------------------VVRIWERSKMSSSKSLHRFTDHC------ 189 (335)
Q Consensus 146 -----------~i~~~~~~~~~~~l~~~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~------ 189 (335)
....++++|++..++.++.++ .|..+|.++++..-..+. ..|.
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~-~~~d~wd~~~ 311 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE-TPGDNWDYTS 311 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec-CCCccccccc
Confidence 113577889888888887664 488899877543222221 1121
Q ss_pred -CCeeEEEecCCCC--cEEEEecCCCCCeEEEEECCCCceEEEeecCC------------cE------------------
Q 019847 190 -GGVKALAWSPHQV--NVLATGGGREDGCIKIWNVQKGTCIHGIDAKA------------QI------------------ 236 (335)
Q Consensus 190 -~~v~~~~~~~~~~--~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~------------~~------------------ 236 (335)
.....+....+|+ .+++.++ .+|.++++|.++|+.+..++... ++
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAP--KNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred CCCcEEEecccCCcEeeEEEEEC--CCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 1122233333553 4555554 89999999999999987765321 11
Q ss_pred ------eEEEeCCCCceeeeeeeee-----------ee--------------------------cCCCeEEEEECCCCce
Q 019847 237 ------CGLEWNRHHKEILSGHGFS-----------AS--------------------------GDGNKLCLWKYPNMTK 273 (335)
Q Consensus 237 ------~~~~~~~~~~~~~~~~~~~-----------~~--------------------------~~~~~i~i~d~~~~~~ 273 (335)
..++++|+...+++...-. .+ ...+.|..||+.+++.
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~ 469 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA 469 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE
Confidence 1467888887776642100 00 0137899999999998
Q ss_pred eecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCc
Q 019847 274 VGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDS 319 (335)
Q Consensus 274 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~ 319 (335)
+.++.. ..++....+..++.+++.++.||.+++||..+++.....
T Consensus 470 ~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 470 AWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 877653 334555567777888999999999999999988765443
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.52 E-value=1.1e-11 Score=111.33 Aligned_cols=268 Identities=12% Similarity=0.122 Sum_probs=170.4
Q ss_pred eeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC---CCCEEEEEE------CCCcEEEEeCCCcee
Q 019847 22 IDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH---DAKTLAVGY------MDSKLQLWDAETSKL 92 (335)
Q Consensus 22 ~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~------~dg~i~iw~~~~~~~ 92 (335)
+...++.+++++.|+.|..+|.++|+..-......+......+..+| ++ .+++++ .+|.|+.||.++|+.
T Consensus 117 ~~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 117 VAVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKE 195 (689)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred cEEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcE
Confidence 34456788888889999999999999866555431111111111222 44 455553 368999999999998
Q ss_pred Eeeecccc-------------------------------cceeEeeecCCCCCEEEEeeCCCc-----------------
Q 019847 93 VRNLEGHH-------------------------------RRVATSSWNHWNGHILTSGSKDKS----------------- 124 (335)
Q Consensus 93 ~~~~~~~~-------------------------------~~v~~~~~~~~~~~~l~~~~~dg~----------------- 124 (335)
+..+.... ..-..+++.| +..+++.+..++.
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~ 274 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFL 274 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceee
Confidence 87764210 0112567777 7788888887764
Q ss_pred --EEEEecccCCeeeEEeec-CC-------CCEEEEEeecCCC---EEEEEeCCCeEEEEEccCCCcccceee-------
Q 019847 125 --IINHDVRVSNNVTSCIKA-HS-------GEVCGLKWSNEGN---LLASGGDDNVVRIWERSKMSSSKSLHR------- 184 (335)
Q Consensus 125 --i~~~d~~~~~~~~~~~~~-~~-------~~i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~------- 184 (335)
|..+|.++++..-..... |. .+........+|+ .++.++.+|.++++|.++++.......
T Consensus 275 ~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~ 354 (689)
T 1yiq_A 275 SSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTK 354 (689)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE
T ss_pred eeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccc
Confidence 999999988765443222 21 2222223333554 788999999999999877643211000
Q ss_pred ------------------ccCCCC-----------CeeEEEecCCCCcEEEEec------------------------C-
Q 019847 185 ------------------FTDHCG-----------GVKALAWSPHQVNVLATGG------------------------G- 210 (335)
Q Consensus 185 ------------------~~~~~~-----------~v~~~~~~~~~~~~~~~~~------------------------g- 210 (335)
+..... .-..++++|+...+++... |
T Consensus 355 ~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 434 (689)
T 1yiq_A 355 GMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGL 434 (689)
T ss_dssp EEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSS
T ss_pred ccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCc
Confidence 000000 0123678887765554311 0
Q ss_pred -----------------CCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 211 -----------------REDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 211 -----------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
..+|.|+.||+.+++.+..++.+.+...-.+...+..++.+ +.|+.++.||.++++.
T Consensus 435 ~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g------t~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 435 RTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG------SADGRVIAYAADTGEK 508 (689)
T ss_dssp EECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE------CTTSEEEEEETTTCCE
T ss_pred cccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE------CCCCcEEEEECCCCcc
Confidence 01478999999999999888877665544555666666655 7799999999999999
Q ss_pred eecccCCCCc-eeEeEEcCCCCEEE
Q 019847 274 VGELQSSNSR-ILDLSQSPDGLTVA 297 (335)
Q Consensus 274 ~~~~~~~~~~-i~~~~~~~~~~~l~ 297 (335)
+.+++...+. ..-+.|..+|+..+
T Consensus 509 lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 509 LWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ceeeeCCCCcccCceEEEECCEEEE
Confidence 9888754332 24467778886443
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.52 E-value=2.4e-12 Score=106.33 Aligned_cols=266 Identities=10% Similarity=0.031 Sum_probs=166.5
Q ss_pred cceeeeecC-CceEEEe---cCCeEEEEEecCCceeeEE----eecCCCCCceEEEEcCCCCEEEEEEC-----CCcEEE
Q 019847 18 YSKVIDWGR-NNVLAVA---LGPVLFLWKWENGKVKKLL----QVPGEDDYPTSVSWSHDAKTLAVGYM-----DSKLQL 84 (335)
Q Consensus 18 ~~~~~~~~~-~~~~~~~---~~~~i~vw~~~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i 84 (335)
....+++++ ++++++. .++.++||.+++++..+.- ...+|-..+..++++++++++++-.. ++.|.+
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 456678875 4566553 2343667776655432110 11234567899999999876665543 578999
Q ss_pred EeCCCceeEeeeccc------ccceeEeeecCCCCCEEEEee---CCCcEEEEecccCCeeeEEeecCCCCEE-EEEeec
Q 019847 85 WDAETSKLVRNLEGH------HRRVATSSWNHWNGHILTSGS---KDKSIINHDVRVSNNVTSCIKAHSGEVC-GLKWSN 154 (335)
Q Consensus 85 w~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~i~-~~~~~~ 154 (335)
||+.+++.+..+... ...+..+++.+.++..+++.. .++.|.+||+.++. ..+.+..|..... ...+.+
T Consensus 98 ~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 98 WDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-AARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-EEEECTTCTTTSCCSCCCEE
T ss_pred EECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-EEEEecCCCcccccccceeE
Confidence 999999877665422 235688999873455556655 67899999998554 3444443322110 134455
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC---CCc-----e
Q 019847 155 EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ---KGT-----C 226 (335)
Q Consensus 155 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~---~~~-----~ 226 (335)
++..+.+.+.++.++.|. ..+..++|+|+++.++++.. ..+.+..++.. .+. .
T Consensus 177 ~g~~~~~~~~~g~~~~~~-----------------~~~~gia~s~dg~~ly~~~~--~~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPH-----------------LGVNGIVLDAENEWLYLSPM--HSTSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp TTEECBEECTTSCEECCC-----------------CCEEEEEECTTSCEEEEEES--SCSEEEEEEHHHHTCTTCCHHHH
T ss_pred CCEEEEeccCCCceecee-----------------cccceeEeccCCCEEEEEeC--CCCeEEEEEHHHhcCCCCChhhh
Confidence 676677677777665443 23578999999987777654 44466666532 111 0
Q ss_pred ---EEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC-CCCceeEeEEcCCCCEEEEEeCC
Q 019847 227 ---IHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS-SNSRILDLSQSPDGLTVATAGAD 302 (335)
Q Consensus 227 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d 302 (335)
+...........++++++|...++. ..++.|.+||..+++....... +...+.+++|.++++++++.+..
T Consensus 238 ~~~~~~~g~~g~pdgia~d~~G~l~va~------~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 238 GSKIERYSEKPICDGISIDKDHNIYVGD------LAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp HTTCEEEEECCSCSCEEECTTCCEEEEE------GGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred hcceEecccCCCCceEEECCCCCEEEEc------cCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 1111122345679999998776665 5688999999855654322222 23458899999999888888766
Q ss_pred CcEEEEe
Q 019847 303 ETIRFWE 309 (335)
Q Consensus 303 g~v~iw~ 309 (335)
+.+.+|.
T Consensus 312 ~~~~~f~ 318 (343)
T 2qe8_A 312 HHSAPLN 318 (343)
T ss_dssp GGSGGGB
T ss_pred ccccccc
Confidence 5554443
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.52 E-value=1.1e-10 Score=95.69 Aligned_cols=218 Identities=15% Similarity=0.073 Sum_probs=143.3
Q ss_pred ceeeeecC--CceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee
Q 019847 19 SKVIDWGR--NNVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN 95 (335)
Q Consensus 19 ~~~~~~~~--~~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 95 (335)
.....|++ +.++.+. .++.|..||.++++... +.. ...+.+++++|+|+++++. .+ .|.+||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~---~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HAL---PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EEC---SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EEC---CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEE
Confidence 34577887 3455544 57899999998876532 332 3578999999999877654 44 499999988775432
Q ss_pred ecc----cccceeEeeecCCCCCEEEEeeC------CCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEE-eC
Q 019847 96 LEG----HHRRVATSSWNHWNGHILTSGSK------DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASG-GD 164 (335)
Q Consensus 96 ~~~----~~~~v~~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~ 164 (335)
... ....+..+.++| +++++++... .+.|..++ ...... +.........++|+|+++.++.+ +.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~---~g~~~~-~~~~~~~~~~i~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA---KGKVTK-LFADISIPNSICFSPDGTTGYFVDTK 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE---TTEEEE-EEEEESSEEEEEECTTSCEEEEEETT
T ss_pred eeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe---CCcEEE-eeCCCcccCCeEEcCCCCEEEEEECC
Confidence 221 124688999999 8887665542 24455555 333222 22233457889999999877555 45
Q ss_pred CCeEEEEEcc--CC-Cc--ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCC-cEeE
Q 019847 165 DNVVRIWERS--KM-SS--SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKA-QICG 238 (335)
Q Consensus 165 dg~i~iwd~~--~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~-~~~~ 238 (335)
++.|.+||+. ++ .. ...+..+......+..++++++|..+++.. .++.|..||. +++.+..+..+. .+.+
T Consensus 200 ~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~---~~~~v~~~d~-~g~~~~~i~~~~~~~~~ 275 (326)
T 2ghs_A 200 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARW---GEGAVDRYDT-DGNHIARYEVPGKQTTC 275 (326)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEE---TTTEEEEECT-TCCEEEEEECSCSBEEE
T ss_pred CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEe---CCCEEEEECC-CCCEEEEEECCCCCcEE
Confidence 6899999985 32 21 112223333345577899999996444433 4688999998 577777776544 6889
Q ss_pred EEeC-CCCceeeee
Q 019847 239 LEWN-RHHKEILSG 251 (335)
Q Consensus 239 ~~~~-~~~~~~~~~ 251 (335)
++|+ +++..++++
T Consensus 276 ~af~g~d~~~L~vt 289 (326)
T 2ghs_A 276 PAFIGPDASRLLVT 289 (326)
T ss_dssp EEEESTTSCEEEEE
T ss_pred EEEecCCCCEEEEE
Confidence 9998 887776554
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.51 E-value=1.9e-15 Score=125.91 Aligned_cols=262 Identities=11% Similarity=0.049 Sum_probs=141.4
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccc-e
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRR-V 103 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-v 103 (335)
.++.+++++.|+.|+.||..+|+..-.+.. ..+.+..+..++..+++++.||.|+.||.++++.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 567788888999999999999998665543 34555556667878888889999999999999887666543221 1
Q ss_pred eE-eeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccce
Q 019847 104 AT-SSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSL 182 (335)
Q Consensus 104 ~~-~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 182 (335)
.+ .... .+..+++++.++.++.||.++++.... +..+. ...++|++..+++++.|+.|+.||.++++..-..
T Consensus 84 ~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~-~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 84 QASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQT-LSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNA 156 (369)
T ss_dssp TTCSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEE-ecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeE
Confidence 11 1111 345778888999999999998775433 22222 2345678888999999999999998876432222
Q ss_pred eeccCCCCCeeEEEecCCC---CcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeE-EEeCCCCceeeeeeeeeeec
Q 019847 183 HRFTDHCGGVKALAWSPHQ---VNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICG-LEWNRHHKEILSGHGFSASG 258 (335)
Q Consensus 183 ~~~~~~~~~v~~~~~~~~~---~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 258 (335)
.. .. .....+.++. ..+++.+ .||.++.||.++|+.+...+...++.. ..+++++...+.. . ..
T Consensus 157 ~~-~~----~~~~~~~~~~~~~~~v~~~~---~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~-~-~~-- 224 (369)
T 2hz6_A 157 TY-FD----YAASLPEDDVDYKMSHFVSN---GDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMH-I-NV-- 224 (369)
T ss_dssp EE-EE----ECCBCCCCCTTCCCCEEEEE---TSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECC-E-EE--
T ss_pred ec-cc----ccCccccCCccccceEEEEC---CCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEeccc-e-ee--
Confidence 11 11 1222333321 3455543 699999999999999888877666543 3445555322110 0 00
Q ss_pred CCCeEEEEECCCCc----eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 259 DGNKLCLWKYPNMT----KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 259 ~~~~i~i~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
.++.++.+|..+++ .+..+... +.+.+... .+..|+.++.||.++.++...
T Consensus 225 ~~~~l~~ld~~tG~~~~~~~W~~~~~-~~~~sp~~--~~g~lyv~~~~G~l~al~~~~ 279 (369)
T 2hz6_A 225 AVETLRYLTFMSGEVGRITKWKYPFP-KETEAKSK--LTPTLYVGKYSTSLYASPSMV 279 (369)
T ss_dssp EHHHHHHHHHHHHHHHHHHTSCCCCC-CHHHHHHH--SEEEECBEECSSCEECCEEEE
T ss_pred cccceeeeehhcCCcccceeeeeccC-cccccccc--ccceEEEecccCCEEecCccc
Confidence 03344555555554 33332211 11111111 234677888899998888763
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.51 E-value=9.1e-11 Score=98.17 Aligned_cols=265 Identities=6% Similarity=-0.014 Sum_probs=166.2
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecCC-------CCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPGE-------DDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.++.+++++.++.|..+|.++++..-...+... ...+.+ ....++..+++++.++.|..+|.++++.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 456788888889999999999987665554321 122222 222356678888899999999999999887765
Q ss_pred ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCE------EEEEeecCCCEEEEEeCCCeEEEE
Q 019847 98 GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEV------CGLKWSNEGNLLASGGDDNVVRIW 171 (335)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i------~~~~~~~~~~~l~~~~~dg~i~iw 171 (335)
........... .+..++.++.++.+..+|..+++....... . ..+ ..... .+..++.+..++.+..+
T Consensus 131 ~~~~~~~~p~~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~-~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~ 203 (376)
T 3q7m_A 131 VAGEALSRPVV---SDGLVLIHTSNGQLQALNEADGAVKWTVNL-D-MPSLSLRGESAPTT--AFGAAVVGGDNGRVSAV 203 (376)
T ss_dssp CSSCCCSCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEEC-C-C-----CCCCCCEE--ETTEEEECCTTTEEEEE
T ss_pred CCCceEcCCEE---ECCEEEEEcCCCeEEEEECCCCcEEEEEeC-C-CCceeecCCCCcEE--ECCEEEEEcCCCEEEEE
Confidence 44332222233 345788888999999999987776443322 1 111 11111 24567788889999999
Q ss_pred EccCCCcccceeeccCCC--CC--------e-eEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEE
Q 019847 172 ERSKMSSSKSLHRFTDHC--GG--------V-KALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLE 240 (335)
Q Consensus 172 d~~~~~~~~~~~~~~~~~--~~--------v-~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 240 (335)
|.++++. +....... .. + ..... .+..+++.+ .++.+..+|.++++.+....... ...+.
T Consensus 204 d~~tG~~---~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~---~~g~l~~~d~~tG~~~w~~~~~~-~~~~~ 274 (376)
T 3q7m_A 204 LMEQGQM---IWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALA---YNGNLTALDLRSGQIMWKRELGS-VNDFI 274 (376)
T ss_dssp ETTTCCE---EEEEECCC-----------CCCCCCEE--ETTEEEEEC---TTSCEEEEETTTCCEEEEECCCC-EEEEE
T ss_pred ECCCCcE---EEEEecccCCCCcccccccccCCCcEE--ECCEEEEEe---cCcEEEEEECCCCcEEeeccCCC-CCCce
Confidence 9876533 22221110 00 0 01111 123455433 68999999999999887765433 23333
Q ss_pred eCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC-CCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q 019847 241 WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-NSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGD 316 (335)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~ 316 (335)
. ++..++.+ +.++.+..+|..+++.+...... ...+...... +..|+.++.+|.+.++|..+++..
T Consensus 275 ~--~~~~l~~~------~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 275 V--DGNRIYLV------DQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp E--ETTEEEEE------ETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEE
T ss_pred E--ECCEEEEE------cCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCCcEE
Confidence 2 23344433 56889999999999987666522 2223333332 457888999999999998887644
No 229
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.50 E-value=6e-11 Score=96.25 Aligned_cols=217 Identities=10% Similarity=0.113 Sum_probs=143.1
Q ss_pred ceeeeecCC-c-eEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee
Q 019847 19 SKVIDWGRN-N-VLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN 95 (335)
Q Consensus 19 ~~~~~~~~~-~-~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 95 (335)
.....|+++ + ++.+. .++.|..|+. +++.. .+. .+...+..++++++|+++++...++.|.+|+.+ ++....
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~-~~~--~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVD-VLL--DATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEE-EEE--ESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEE-EEe--CCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 345778763 3 44444 6789999987 45532 222 245668999999999976665566789999986 553322
Q ss_pred eccc----ccceeEeeecCCCCCEEEE----eeC-------------CCcEEEEecccCCeeeEEeecCCCCEEEEEeec
Q 019847 96 LEGH----HRRVATSSWNHWNGHILTS----GSK-------------DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN 154 (335)
Q Consensus 96 ~~~~----~~~v~~~~~~~~~~~~l~~----~~~-------------dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~ 154 (335)
.... ...+..+++.+ +++++++ |.. .+.|..+|..++.. ... . .......++|+|
T Consensus 122 ~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~-~~~-~-~~~~p~gl~~sp 197 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL-QRM-A-DLDHPNGLAFSP 197 (305)
T ss_dssp ECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-EEE-E-EESSEEEEEECT
T ss_pred EeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-EEE-e-cCCCCcceEEcC
Confidence 2111 13467899999 8888886 432 24577777654432 222 2 334578899999
Q ss_pred CCCEEEEEeCC------CeEEEEEccCCCcccceeec-cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 155 EGNLLASGGDD------NVVRIWERSKMSSSKSLHRF-TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 155 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
+++.|+.+... +.|++|++.... ......+ .........++++++|. +.++. .+.|.+||. +++.+
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~----~~gv~~~~~-~g~~~ 270 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW-LWSSS----GTGVCVFDS-DGQLL 270 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC-EEECC----SSEEEEECT-TSCEE
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC-EEEec----CCcEEEECC-CCCEE
Confidence 99988877665 689999987532 1111111 11234456789999996 55533 345999997 57777
Q ss_pred EEeecCCcEeEEEeCCCCceeeee
Q 019847 228 HGIDAKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~ 251 (335)
..+..+..+.+++|.++++.+..+
T Consensus 271 ~~~~~~~~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 271 GHIPTPGTASNCTFDQAQQRLFIT 294 (305)
T ss_dssp EEEECSSCCCEEEECTTSCEEEEE
T ss_pred EEEECCCceeEEEEeCCCCEEEEE
Confidence 788776678899999998877665
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.48 E-value=2.2e-11 Score=110.05 Aligned_cols=243 Identities=12% Similarity=0.115 Sum_probs=158.9
Q ss_pred ccceeeeecCC-ceEEEec--C----CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCC---------
Q 019847 17 YYSKVIDWGRN-NVLAVAL--G----PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDS--------- 80 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~--~----~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------- 80 (335)
..+..++|+++ +.++.+. . ..|++||+++++.... .+.+ .....++|+ |++.|+.++.+.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEE--EESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCC--ceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 35667789985 4455321 2 4799999999986543 2221 113567899 999999988774
Q ss_pred ----cEEEEeCCCce----eEeeecc-cccceeEeeecCCCCCEEEEeeC----CCcEEEEecccCCeeeEEeecCCCCE
Q 019847 81 ----KLQLWDAETSK----LVRNLEG-HHRRVATSSWNHWNGHILTSGSK----DKSIINHDVRVSNNVTSCIKAHSGEV 147 (335)
Q Consensus 81 ----~i~iw~~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~~~i 147 (335)
.|++|++.++. ++..... +......+.|+| +++.|+.... ++.|+++|+.++......+..+....
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 39999998754 3333333 445578899999 7877654332 35899999976643344455566555
Q ss_pred EEEEeecCCCEEEEEe-CC---CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC--eEEEEEC
Q 019847 148 CGLKWSNEGNLLASGG-DD---NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG--CIKIWNV 221 (335)
Q Consensus 148 ~~~~~~~~~~~l~~~~-~d---g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~--~i~i~d~ 221 (335)
... +++++..|+..+ .+ +.|..+|+..+.. .....+..+...+. .|+++++.+++... .++ .|++||+
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~--~~s~~g~~lv~~~~--~~g~~~l~~~d~ 357 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWRDLIPERQQVL--TVHSGSGYLFAEYM--VDATARVEQFDY 357 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCE--EEEEETTEEEEEEE--ETTEEEEEEECT
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccEEEecCCCCEE--EEEEECCEEEEEEE--ECCeeEEEEEEC
Confidence 554 666666555444 33 6799999876532 12334455655555 88999988887765 554 6899998
Q ss_pred CCCceEEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 222 QKGTCIHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 222 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
..+ ....+.. ...+..+.+++++..++... .....-+.+..||+.+++.
T Consensus 358 ~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~--ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 358 EGK-RVREVALPGLGSVSGFNGKHDDPALYFGF--ENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp TSC-EEEEECCSSSSEEEECCCCTTCSCEEEEE--ECSSSCCEEEEECTTTCCE
T ss_pred CCC-eeEEeecCCCceEEeeecCCCCCEEEEEe--cCCCCCCEEEEEECCCCeE
Confidence 744 4445443 34577788888988877552 1113348899999887654
No 231
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.46 E-value=4.6e-11 Score=107.41 Aligned_cols=288 Identities=13% Similarity=0.059 Sum_probs=179.1
Q ss_pred CCceEEEecCCeEEEEEecCCceeeEEeecCCCC--------Cc-eEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeee
Q 019847 26 RNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDD--------YP-TSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNL 96 (335)
Q Consensus 26 ~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 96 (335)
++.+++++.++.|+.+|..+|+.+-.+....... .+ ..++. .+..+++++.|+.|..+|.++|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 4667788888999999999999765554321100 00 11222 4568888999999999999999998776
Q ss_pred ccc--ccceeEeeecCC-CCCEEEEee------CCCcEEEEecccCCeeeEEeecC------------------------
Q 019847 97 EGH--HRRVATSSWNHW-NGHILTSGS------KDKSIINHDVRVSNNVTSCIKAH------------------------ 143 (335)
Q Consensus 97 ~~~--~~~v~~~~~~~~-~~~~l~~~~------~dg~i~~~d~~~~~~~~~~~~~~------------------------ 143 (335)
... ......+..+|. .+..++.+. .+|.|+.||.++++.+-+.....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 642 111111111110 123444443 36899999999888654432110
Q ss_pred ------CCCEEEEEeecCCCEEEEEeCCCe-------------------EEEEEccCCCcccceeeccCCC-------CC
Q 019847 144 ------SGEVCGLKWSNEGNLLASGGDDNV-------------------VRIWERSKMSSSKSLHRFTDHC-------GG 191 (335)
Q Consensus 144 ------~~~i~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~-------~~ 191 (335)
......++++|+...++.++.++. |..+|.++++..-..+. ..|. .+
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT-TPGDAWDYTATQH 306 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES-STTCCSCCCCCSC
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeec-CCcccccccCCCC
Confidence 001125778898889999887764 99999887543222221 1121 12
Q ss_pred eeEEEecCCCC--cEEEEecCCCCCeEEEEECCCCceEEEeecCC-----------------------------------
Q 019847 192 VKALAWSPHQV--NVLATGGGREDGCIKIWNVQKGTCIHGIDAKA----------------------------------- 234 (335)
Q Consensus 192 v~~~~~~~~~~--~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~----------------------------------- 234 (335)
........++. .+++.++ .+|.++++|.++|+.+...+...
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~ 384 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAP--KNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPA 384 (689)
T ss_dssp EEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSC
T ss_pred cEEEeeccCCcEEEEEEEEC--CCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCC
Confidence 22222222442 2455554 89999999999999875433211
Q ss_pred -----cEeEEEeCCCCceeeeeeee---------------------eee------------------cCCCeEEEEECCC
Q 019847 235 -----QICGLEWNRHHKEILSGHGF---------------------SAS------------------GDGNKLCLWKYPN 270 (335)
Q Consensus 235 -----~~~~~~~~~~~~~~~~~~~~---------------------~~~------------------~~~~~i~i~d~~~ 270 (335)
.-..++++|+...+++...- ..+ ..+|.|..||+.+
T Consensus 385 ~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t 464 (689)
T 1yiq_A 385 FWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK 464 (689)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT
T ss_pred cccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCC
Confidence 01126778887777654210 000 0148899999999
Q ss_pred CceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCCc
Q 019847 271 MTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDEDS 319 (335)
Q Consensus 271 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~~ 319 (335)
++.+-+++.+.. ...-.+...+.+++.++.||.++.||..+++..-+.
T Consensus 465 G~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 465 QQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp TEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 999888765443 334456667779999999999999999998765443
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.43 E-value=1.8e-10 Score=95.62 Aligned_cols=220 Identities=10% Similarity=0.043 Sum_probs=146.8
Q ss_pred CceEEEe-cCCeEEEEEecCC----ceeeEEe---e--cCCCCCceEEEEcCCCCEEEEEECC------CcEEEEeCCCc
Q 019847 27 NNVLAVA-LGPVLFLWKWENG----KVKKLLQ---V--PGEDDYPTSVSWSHDAKTLAVGYMD------SKLQLWDAETS 90 (335)
Q Consensus 27 ~~~~~~~-~~~~i~vw~~~~~----~~~~~~~---~--~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~ 90 (335)
..+++.+ .++.|+++|+.+. +..+.+. + +........+...|+| .++++..+ |.|.++|.+++
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 3444444 6789999998755 3333331 1 0011235667888999 66666555 78999999999
Q ss_pred eeEeeecccccc---eeEeeecCCCCCEEEEee-------------------CCCcEEEEecccCCeeeEEeecC-C-CC
Q 019847 91 KLVRNLEGHHRR---VATSSWNHWNGHILTSGS-------------------KDKSIINHDVRVSNNVTSCIKAH-S-GE 146 (335)
Q Consensus 91 ~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~-------------------~dg~i~~~d~~~~~~~~~~~~~~-~-~~ 146 (335)
+.+..+.....+ -..+.|+| +.+.+++.. ...+|.+||+.+. +....+..- . ..
T Consensus 175 ~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 175 EPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-KRIHSLTLGEENRM 252 (462)
T ss_dssp CEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-EEEEEEESCTTEEE
T ss_pred eEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-cEeeEEecCCCCCc
Confidence 999988733222 33577899 888888875 3689999999865 444444432 1 23
Q ss_pred EEEEEe--ecCCCEEEEEeC------CCeEEEEEccCCCcccceeec--cC----------------CCCCeeEEEecCC
Q 019847 147 VCGLKW--SNEGNLLASGGD------DNVVRIWERSKMSSSKSLHRF--TD----------------HCGGVKALAWSPH 200 (335)
Q Consensus 147 i~~~~~--~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~--~~----------------~~~~v~~~~~~~~ 200 (335)
...+.| +|+++++.++.. +++|.+|..+.+ .....+.+ .. -......+.++||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 455655 999998887774 568877665431 11111111 00 0234678999999
Q ss_pred CCcEEEEecCCCCCeEEEEECCC---CceEEEeecCC---------------cEeEEEeCCCCceeeeee
Q 019847 201 QVNVLATGGGREDGCIKIWNVQK---GTCIHGIDAKA---------------QICGLEWNRHHKEILSGH 252 (335)
Q Consensus 201 ~~~~~~~~~g~~d~~i~i~d~~~---~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~ 252 (335)
+++|+++.- ..+.|.+||+.. .+.+..+...+ ....++++|+|+++++..
T Consensus 332 GrfLYVSnr--g~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLW--GIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEET--TTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeC--CCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999886 678999999853 35566665542 258899999999998875
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.42 E-value=1.1e-10 Score=95.67 Aligned_cols=264 Identities=13% Similarity=0.077 Sum_probs=160.7
Q ss_pred eeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeeccc
Q 019847 20 KVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGH 99 (335)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 99 (335)
.++...++..+.++.++ +..+|. +++....... .........+. +..+.+++.++.|..+|.. ++........
T Consensus 63 ~~~~~~~~g~l~v~t~~-l~~~d~-~g~~~~~~~~--~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~ 135 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK-VYAINP-DGTEKWRFDT--KKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTK 135 (330)
T ss_dssp ECCEETTTTEECCSSCE-EEEECC-CGGGGGGSCC-------CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECS
T ss_pred cceEEecCCcEEEecCc-EEEECC-CCcEEEEEEC--CCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCC
Confidence 34444433333333334 777775 4443222221 12222223333 5567888889999999988 7776666655
Q ss_pred ccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc
Q 019847 100 HRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS 179 (335)
Q Consensus 100 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 179 (335)
...+.++...+ ++. ++.++.++.+..+|.. +... .........+.++...+++.+++ ++ +.|..+| .++
T Consensus 136 ~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~-~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g--- 204 (330)
T 3hxj_A 136 KAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEK-WRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDG--- 204 (330)
T ss_dssp SCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEE-EEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTS---
T ss_pred CceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEe-EEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCC---
Confidence 55566666654 444 6667888999999987 5443 33333445566677777777554 44 7789999 433
Q ss_pred cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCc-EeEEEeCCCCceeeeeeeeeeec
Q 019847 180 KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQ-ICGLEWNRHHKEILSGHGFSASG 258 (335)
Q Consensus 180 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 258 (335)
+.+.........+.++...+++. +.+.. .++.+..+| .+++.+..+..... ...+...+++...+ + +
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~-l~v~t---~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~------t 272 (330)
T 3hxj_A 205 TEKWNFYAGYWTVTRPAISEDGT-IYVTS---LDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTDTIYF-G------S 272 (330)
T ss_dssp CEEEEECCSSCCCSCCEECTTSC-EEEEE---TTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTSCEEE-E------C
T ss_pred cEEEEEccCCcceeceEECCCCe-EEEEc---CCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCCeEEE-e------c
Confidence 22333333445678888888874 54443 578888888 45666666654432 34455555665433 3 5
Q ss_pred CCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q 019847 259 DGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSG 315 (335)
Q Consensus 259 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~ 315 (335)
.++.+..+|. +++.+..+......+.++...++++ |..++.+|.+++......+.
T Consensus 273 ~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 273 YDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp TTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-----
T ss_pred CCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccccc
Confidence 5778999995 6777666655556677888888886 55688999999987776544
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.41 E-value=3e-11 Score=103.75 Aligned_cols=266 Identities=8% Similarity=0.050 Sum_probs=181.5
Q ss_pred cccceeeeecC-----CceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEE-c-CCCCEEEEEE----------
Q 019847 16 DYYSKVIDWGR-----NNVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSW-S-HDAKTLAVGY---------- 77 (335)
Q Consensus 16 ~~~~~~~~~~~-----~~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~~~~---------- 77 (335)
+..-..+++.+ ..+++.. .++.|.+.|+++.+..+++.++.- ..+..+++ + |+++++++++
T Consensus 86 d~hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg 164 (595)
T 1fwx_A 86 DLHHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDG 164 (595)
T ss_dssp CBCCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSS
T ss_pred CCCccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCC
Confidence 44445566632 3344433 456899999999998887776543 34788888 5 9999998885
Q ss_pred --------CCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCC---------------cEEEEecccCC
Q 019847 78 --------MDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK---------------SIINHDVRVSN 134 (335)
Q Consensus 78 --------~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---------------~i~~~d~~~~~ 134 (335)
.++.+.+.|.++.+...++.... ....++++| +++++++.+.+. .+.+.|.....
T Consensus 165 ~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~ 242 (595)
T 1fwx_A 165 TNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE 242 (595)
T ss_dssp SSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH
T ss_pred cccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeecccee
Confidence 24579999999999888887433 567788999 888888887653 24444432211
Q ss_pred eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccc-eeeccCCCCCeeEEEecCCCCcEEEEecCCCC
Q 019847 135 NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKS-LHRFTDHCGGVKALAWSPHQVNVLATGGGRED 213 (335)
Q Consensus 135 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d 213 (335)
. +.++|++... +.|.+.|.++.. ... +..+.. .....++.++|||+++++++. .+
T Consensus 243 ~----------------~v~~Gk~~~i----~~V~VID~~~~~-~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~--~s 298 (595)
T 1fwx_A 243 K----------------AIAAGDYQEL----NGVKVVDGRKEA-SSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGK--LS 298 (595)
T ss_dssp H----------------HHHHTCSEEE----TTEEEEECSGGG-CCSSEEEEEE-ESSCCCEEECTTSSEEEEECT--TS
T ss_pred E----------------eccCCCeeEE----CcEEEEeCcccC-CceeEEEEec-CCCceEEEEcCCCCEEEEeCC--CC
Confidence 1 2234444332 459999987621 112 222221 234567999999999999876 78
Q ss_pred CeEEEEECCCCc------------eEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC----------C
Q 019847 214 GCIKIWNVQKGT------------CIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN----------M 271 (335)
Q Consensus 214 ~~i~i~d~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~----------~ 271 (335)
.+|.++|+.+.+ ....++.......++|+|+| .+.+.. .-+++|.+||+.+ .
T Consensus 299 ~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~-----~ldsqV~kwdi~~a~~~~~g~~~~ 372 (595)
T 1fwx_A 299 PTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSL-----FLDSQVVKWNIEDAIRAYAGEKVD 372 (595)
T ss_dssp SBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEE-----TTTTEEEEEEHHHHHHHHHTCSCC
T ss_pred CeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEE-----ecCCcEEEEEhhHhhhhhcccccc
Confidence 999999998653 45566667788999999999 554432 5699999999877 5
Q ss_pred ceeecccCCCCc-----eeEeEEcCCCCEEEEEeC---CCc----------EEEEecCCCC
Q 019847 272 TKVGELQSSNSR-----ILDLSQSPDGLTVATAGA---DET----------IRFWEAFGPS 314 (335)
Q Consensus 272 ~~~~~~~~~~~~-----i~~~~~~~~~~~l~~~~~---dg~----------v~iw~~~~~~ 314 (335)
+.+.++..|-.+ -..+.++|||++|+++.. |.. -.++|+.+.+
T Consensus 373 ~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 373 PIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred eeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 566666655432 133467899999998853 433 1788886544
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.39 E-value=2.9e-13 Score=112.80 Aligned_cols=204 Identities=10% Similarity=0.018 Sum_probs=113.9
Q ss_pred CCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCC-CE
Q 019847 69 DAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSG-EV 147 (335)
Q Consensus 69 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~-~i 147 (335)
++..+++++.||.|+.||..+|+.+..+.. ..+.+..+.. ++..+++++.||.|+.||..+++.... ...+.. .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~-~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTK-LPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEE-CSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeee-eeccCcccc
Confidence 677899999999999999999999988875 5555555555 677888889999999999987665332 211110 00
Q ss_pred E-EEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce
Q 019847 148 C-GLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC 226 (335)
Q Consensus 148 ~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~ 226 (335)
. +..+. .+..+++++.|+.++.||.++++. +..+..+. ...++|++..+++.+ .|+.|+.||.++|+.
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~---~w~~~~~~----~~~~~p~~~~v~~~~---~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLLTGEK---QQTLSSAF----ADSLSPSTSLLYLGR---TEYTITMYDTKTREL 152 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC-----------------------------EEEEE---EEEEEECCCSSSSSC
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECCCCcE---EEEecCCC----cccccccCCEEEEEe---cCCEEEEEECCCCCE
Confidence 0 00111 345677888899999999887543 33333222 234566665555543 689999999999987
Q ss_pred EEEeecCCcEeEEEeCCCC---ceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCC
Q 019847 227 IHGIDAKAQICGLEWNRHH---KEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGL 294 (335)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 294 (335)
+..++... .....+.++. ..++++ +.++.++.||..+++.+.+.......+....+++++.
T Consensus 153 ~W~~~~~~-~~~~~~~~~~~~~~~v~~~------~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 153 RWNATYFD-YAASLPEDDVDYKMSHFVS------NGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp CCEEEEEE-ECCBCCCCCTTCCCCEEEE------ETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred EEeEeccc-ccCccccCCccccceEEEE------CCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 76654321 2223333322 333333 5689999999999998877653332233345556664
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.36 E-value=5.6e-11 Score=97.98 Aligned_cols=224 Identities=9% Similarity=-0.051 Sum_probs=140.9
Q ss_pred cEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEee----------CCCcEEEEecccCCeeeEEeec--C----C
Q 019847 81 KLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGS----------KDKSIINHDVRVSNNVTSCIKA--H----S 144 (335)
Q Consensus 81 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~~~d~~~~~~~~~~~~~--~----~ 144 (335)
.|.++|..+++.+..+.....+ .+.++| +++.++++. .++.|.+||+.+.+.......+ . .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 7889999999999998866666 799999 888887775 4789999999987765443222 0 1
Q ss_pred CCEEEEEeecCCCEEEEEeC--CCeEEE--EEccCCCcccceeec------c---------CCCCCeeEEEe--------
Q 019847 145 GEVCGLKWSNEGNLLASGGD--DNVVRI--WERSKMSSSKSLHRF------T---------DHCGGVKALAW-------- 197 (335)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~------~---------~~~~~v~~~~~-------- 197 (335)
.....++++|||++++++.. +..+.+ +|+.+ ...+..- . ...+.+..+..
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 23457899999999999875 457888 88754 1111100 0 00000100110
Q ss_pred ------------------cCCCCcEEEEecCCCCCeEEEEECCCCc--eEEEeecC-----------CcEeEEEeCCCCc
Q 019847 198 ------------------SPHQVNVLATGGGREDGCIKIWNVQKGT--CIHGIDAK-----------AQICGLEWNRHHK 246 (335)
Q Consensus 198 ------------------~~~~~~~~~~~~g~~d~~i~i~d~~~~~--~~~~~~~~-----------~~~~~~~~~~~~~ 246 (335)
.+++..++.+. . +.+.+.|+.... .+..+... .....+.++|+++
T Consensus 201 ~v~~~~t~~i~vg~~P~~~~~~~~~~~vs---~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~ 276 (368)
T 1mda_H 201 IVGAQCTGAQNCSSQAAQANYPGMLVWAV---A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD 276 (368)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEECB---S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT
T ss_pred eEEEEeeeeeeCCCCccccccCCEEEEEc---C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC
Confidence 12222222221 3 556666664322 22222111 1112267999998
Q ss_pred eeeeeeeeeeec-C-----CCeEEEEECCCCceeecccCCCCceeEeEEcCCCCE-EEEEe-CCCcEEEEecCCCCCCCC
Q 019847 247 EILSGHGFSASG-D-----GNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLT-VATAG-ADETIRFWEAFGPSGDED 318 (335)
Q Consensus 247 ~~~~~~~~~~~~-~-----~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~-~dg~v~iw~~~~~~~~~~ 318 (335)
.++....- . . ++.+.++|+.+.+.+..+.... ....++|+|||++ +++.. .++.|.++|+.+.+....
T Consensus 277 ~lyV~~~~---~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 277 GIMILTVE---HSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp EEEEEEEE---CSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred EEEEEecc---ccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 88764210 0 1 2356699999999998887544 5789999999974 55555 589999999998765543
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=3.1e-09 Score=95.29 Aligned_cols=284 Identities=11% Similarity=0.111 Sum_probs=174.6
Q ss_pred eeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcC--CCCEEEEEEC------CCcEEEEeCCCceeE
Q 019847 22 IDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSH--DAKTLAVGYM------DSKLQLWDAETSKLV 93 (335)
Q Consensus 22 ~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~------dg~i~iw~~~~~~~~ 93 (335)
+...++.+++++.++.|..+|.++|+..-......... ...+.-+| .+..++++.. +|.|..+|.++|+.+
T Consensus 113 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 191 (668)
T 1kv9_A 113 VALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK-PYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLA 191 (668)
T ss_dssp CEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS-SCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred eEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC-cceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEE
Confidence 34456778888889999999999999876655432110 01111111 2345555543 589999999999998
Q ss_pred eeecccc---c----------------------------ceeEeeecCCCCCEEEEeeCCC-------------------
Q 019847 94 RNLEGHH---R----------------------------RVATSSWNHWNGHILTSGSKDK------------------- 123 (335)
Q Consensus 94 ~~~~~~~---~----------------------------~v~~~~~~~~~~~~l~~~~~dg------------------- 123 (335)
..+.... . ....+++.+ ...+++.+..++
T Consensus 192 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 192 WRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 7765211 0 012356777 677888887766
Q ss_pred cEEEEecccCCeeeEEeec-CC-------CCEEEEEeecCCC---EEEEEeCCCeEEEEEccCCCccccee--------e
Q 019847 124 SIINHDVRVSNNVTSCIKA-HS-------GEVCGLKWSNEGN---LLASGGDDNVVRIWERSKMSSSKSLH--------R 184 (335)
Q Consensus 124 ~i~~~d~~~~~~~~~~~~~-~~-------~~i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~--------~ 184 (335)
.|..+|.++++..-..... |. .+.....+..+++ .++.++.+|.++++|.++++...... .
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 3999999988765443322 22 2333333334665 68889999999999987754321100 0
Q ss_pred ccCC-CCC------------------------eeEEEecCCCCcEEEEe-------------------------------
Q 019847 185 FTDH-CGG------------------------VKALAWSPHQVNVLATG------------------------------- 208 (335)
Q Consensus 185 ~~~~-~~~------------------------v~~~~~~~~~~~~~~~~------------------------------- 208 (335)
+... ..+ -..++++|+...+++..
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 0000 000 01256777665444311
Q ss_pred --cCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCce-e
Q 019847 209 --GGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRI-L 285 (335)
Q Consensus 209 --~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i-~ 285 (335)
....+|.|..||+.+++.+...+...+.....+...+..++.+ +.++.++.||.++++.+..++...+.. .
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g------~~dg~l~a~d~~tG~~l~~~~~~~~~~~~ 504 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQG------TAAGQMHAYSADKGEALWQFEAQSGIVAA 504 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE------CTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEE------CCcccchhhhhhcChhheEecCCCCcccC
Confidence 0013488999999999998888766555444444556666655 679999999999999998876543211 2
Q ss_pred EeEEcCCCC-EEEEEeC--------------------CCcEEEEecCCC
Q 019847 286 DLSQSPDGL-TVATAGA--------------------DETIRFWEAFGP 313 (335)
Q Consensus 286 ~~~~~~~~~-~l~~~~~--------------------dg~v~iw~~~~~ 313 (335)
-+.+..+|+ +++.++. .+.|.++.+...
T Consensus 505 p~~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~ 553 (668)
T 1kv9_A 505 PMTFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGK 553 (668)
T ss_dssp CEEEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCC
T ss_pred ceEEEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCcc
Confidence 334455665 4444432 347888887653
No 238
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.31 E-value=1.5e-09 Score=89.58 Aligned_cols=216 Identities=11% Similarity=0.053 Sum_probs=139.9
Q ss_pred ccceeeeecC-CceEEEec------CCeEEEEEecCCceeeEEeecC----CCCCceEEEEcCCCCEE-EEEE---CCCc
Q 019847 17 YYSKVIDWGR-NNVLAVAL------GPVLFLWKWENGKVKKLLQVPG----EDDYPTSVSWSHDAKTL-AVGY---MDSK 81 (335)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~~------~~~i~vw~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l-~~~~---~dg~ 81 (335)
..+..+++++ ++++++.. ++.|.+||+.+++....+.++. +...+..++++|++..+ ++.. .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 4577788887 45666543 4799999999998766666532 23457899999865555 4444 5789
Q ss_pred EEEEeCCCceeEeeeccccccee-EeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEE
Q 019847 82 LQLWDAETSKLVRNLEGHHRRVA-TSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLA 160 (335)
Q Consensus 82 i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 160 (335)
|.+||+.+++..+.+..|..... ...+.+ ++..+.+.+.++.+..|. ..+..++|+|+++.|+
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVI-DGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLY 210 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEE-TTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEE
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeE-CCEEEEeccCCCceecee---------------cccceeEeccCCCEEE
Confidence 99999998887776654422111 134444 666666667777665442 2367899999999888
Q ss_pred EEeCCC-eEEEEEccCCCc-----cccee--eccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec
Q 019847 161 SGGDDN-VVRIWERSKMSS-----SKSLH--RFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA 232 (335)
Q Consensus 161 ~~~~dg-~i~iwd~~~~~~-----~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~ 232 (335)
.+..++ .+..++...... .+... ...++......++++++| .++++.. .++.|.+||.++++.......
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~--~~~~V~~~d~~~G~~~~~~~~ 287 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDL--AHSAIGVITSADRAYKLLVTD 287 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEG--GGTEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC-CEEEEcc--CCCeEEEEECCCCCEEEEEEC
Confidence 887766 555555321100 00000 111233456779999998 4666655 689999999856764433332
Q ss_pred --CCcEeEEEeCCCCceeeee
Q 019847 233 --KAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 233 --~~~~~~~~~~~~~~~~~~~ 251 (335)
...+..+++.+++..+++.
T Consensus 288 ~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 288 EKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp GGGSCEEEEEECTTSCEEEEE
T ss_pred CceecCCeeEECCCCcEEEEe
Confidence 2357889998887766654
No 239
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.31 E-value=3.3e-09 Score=86.64 Aligned_cols=249 Identities=9% Similarity=-0.024 Sum_probs=149.9
Q ss_pred eecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec--------------------ccccceeEeeecCCC
Q 019847 53 QVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE--------------------GHHRRVATSSWNHWN 112 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--------------------~~~~~v~~~~~~~~~ 112 (335)
.+++.-....++++.++++++.++..++.|..|+..+++... +. .....+..+++.+ +
T Consensus 13 ~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~ 90 (322)
T 2fp8_A 13 LIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-Q 90 (322)
T ss_dssp EEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-T
T ss_pred ecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcC-C
Confidence 344433456789999999888888889999999987654332 21 0113567888886 3
Q ss_pred CCEEEEeeCCCcEEEEecccCCeeeEEe---ec-CCCCEEEEEeec-CCCEEEEEeC-----------------CCeEEE
Q 019847 113 GHILTSGSKDKSIINHDVRVSNNVTSCI---KA-HSGEVCGLKWSN-EGNLLASGGD-----------------DNVVRI 170 (335)
Q Consensus 113 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~-~~~~i~~~~~~~-~~~~l~~~~~-----------------dg~i~i 170 (335)
...|+.+...+.+..+|..++. ..... .+ .......+++.+ +|++.++-.. ++.|..
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 3445555555558888876332 11111 10 123478899999 8887766432 367888
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCc--eEEEe-ecCCcEeEEEeCCCCce
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGT--CIHGI-DAKAQICGLEWNRHHKE 247 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~--~~~~~-~~~~~~~~~~~~~~~~~ 247 (335)
+|...... ..+.........++++|++..++++.. .++.|..|++.... ....+ .... ...++++++|..
T Consensus 170 ~d~~~~~~----~~~~~~~~~p~gia~~~dg~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l 242 (322)
T 2fp8_A 170 YDPSTKET----TLLLKELHVPGGAEVSADSSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHF 242 (322)
T ss_dssp EETTTTEE----EEEEEEESCCCEEEECTTSSEEEEEEG--GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCE
T ss_pred EeCCCCEE----EEeccCCccCcceEECCCCCEEEEEeC--CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCE
Confidence 88654321 111111123567999999987777754 57899999987521 11111 2233 778999999986
Q ss_pred eeeeeeeee----ecCCCeEEEEECCCCceeecccCCC----CceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 248 ILSGHGFSA----SGDGNKLCLWKYPNMTKVGELQSSN----SRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 248 ~~~~~~~~~----~~~~~~i~i~d~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
.++...... .+..+.|..+|. .++.+..+.... ..++.+++ .+++++++...++.|..+++...
T Consensus 243 ~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 243 WVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred EEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 655421000 001356788886 466665554332 34666666 46666666667889999988644
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=1.8e-10 Score=94.36 Aligned_cols=253 Identities=11% Similarity=0.051 Sum_probs=160.3
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeeccccccee
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVA 104 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~ 104 (335)
.++.+.+++.++.|..|| .+++...... .+...+.++...+++. +.+++.+ |..+|. +++....+........
T Consensus 29 ~~g~l~v~t~~~~l~~~d-~~g~~~~~~~--~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~ 101 (330)
T 3hxj_A 29 KNGTIYLGSSNKNLYAIN-TDGSVKWFFK--SGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVS 101 (330)
T ss_dssp TTSCEECSSTTTTTEEEC-TTSCEEESSC--GGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----C
T ss_pred cCCeEEEEcCCCEEEEEC-CCCcEEEEEe--cCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCccc
Confidence 345677777788999999 8887643322 2233456666666664 5555444 888886 6666555543333333
Q ss_pred EeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceee
Q 019847 105 TSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHR 184 (335)
Q Consensus 105 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 184 (335)
..... +..+..++.++.+..+|.. +.... ........+.++...+++. +..++.++.|..+|.. +. .+..
T Consensus 102 ~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~-~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~---~~~~ 171 (330)
T 3hxj_A 102 DFTIF---EDILYVTSMDGHLYAINTD-GTEKW-RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT---EKWR 171 (330)
T ss_dssp CEEEE---TTEEEEECTTSEEEEECTT-SCEEE-EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC---EEEE
T ss_pred CceEE---CCEEEEEecCCEEEEEcCC-CCEEE-EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC---EeEE
Confidence 33332 5567778889999999987 55433 3333444456666666766 6667778999999966 32 2333
Q ss_pred ccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEEEeCCCCceeeeeeeeeeecCCCeE
Q 019847 185 FTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGLEWNRHHKEILSGHGFSASGDGNKL 263 (335)
Q Consensus 185 ~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (335)
.......+.++...+++. +++. . +.+..+| .+++.+...... ..+.++...+++...+. +.++.+
T Consensus 172 ~~~~~~~~~~~~~d~~g~-l~v~----t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~-------t~~~gl 237 (330)
T 3hxj_A 172 FKTNDAITSAASIGKDGT-IYFG----S-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVT-------SLDGHL 237 (330)
T ss_dssp EECSSCCCSCCEECTTCC-EEEE----S-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEE-------ETTTEE
T ss_pred EecCCCceeeeEEcCCCE-EEEE----e-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEE-------cCCCeE
Confidence 333345567777777774 4442 3 8899999 777777666543 45777888888765543 346888
Q ss_pred EEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEec
Q 019847 264 CLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEA 310 (335)
Q Consensus 264 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~ 310 (335)
..+| .+++.+..+......+..+.+.+++. |..++.+|.|..+|.
T Consensus 238 ~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 238 YAIN-PDGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp EEEC-TTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred EEEC-CCCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 8887 45666655554444455666666664 666778888888885
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.27 E-value=3.3e-08 Score=78.37 Aligned_cols=233 Identities=9% Similarity=0.029 Sum_probs=143.4
Q ss_pred CEEEEEECCCcEEEEeCCCceeE-----eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCC
Q 019847 71 KTLAVGYMDSKLQLWDAETSKLV-----RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSG 145 (335)
Q Consensus 71 ~~l~~~~~dg~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~ 145 (335)
++|+.+.. +.|+.+++...... ..+......+..++|++.++.++++-..++.|..+++..... .........
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEECCCC
Confidence 45555553 47888888754321 112222346789999984455666666778999999875432 333323335
Q ss_pred CEEEEEeecCCCEEEEE-eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC
Q 019847 146 EVCGLKWSNEGNLLASG-GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG 224 (335)
Q Consensus 146 ~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~ 224 (335)
....+++++++..|..+ ...+.|.++++.... ...+ ..........++++|++..++.+..+...+.|..+++...
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 67899999975555544 456789999976422 1111 1112245789999997777777764112478988887643
Q ss_pred ceEEEee--cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCC
Q 019847 225 TCIHGID--AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGAD 302 (335)
Q Consensus 225 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 302 (335)
....+. .-.....+++++++..++... ...+.|.++|.........+.. ......++.. ++.++++...+
T Consensus 157 -~~~~~~~~~~~~P~gia~d~~~~~lyv~d-----~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 157 -NRRILAQDNLGLPNGLTFDAFSSQLCWVD-----AGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp -CCEEEECTTCSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTT
T ss_pred -CcEEEEECCCCCCcEEEEcCCCCEEEEEE-----CCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCC
Confidence 223332 224578899999887775542 5578999999876543333332 2234566654 34444444456
Q ss_pred CcEEEEecCCCCCC
Q 019847 303 ETIRFWEAFGPSGD 316 (335)
Q Consensus 303 g~v~iw~~~~~~~~ 316 (335)
+.|..++..+++..
T Consensus 229 ~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 229 NSVIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTTTEEE
T ss_pred CeEEEEeCCCCCce
Confidence 88999998876543
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.26 E-value=4.1e-09 Score=94.54 Aligned_cols=285 Identities=12% Similarity=0.037 Sum_probs=174.8
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecCCC--------CCc-eEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPGED--------DYP-TSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN 95 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~--------~~v-~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 95 (335)
.++.+++++.++.|.-+|..+|+.+-.+...... ..+ ..+++ .+..+++++.|+.|..+|.++|+.+..
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 3466778888899999999999976555432110 000 11222 356788888999999999999999887
Q ss_pred eccccc----ceeE-eeecCCCCCEEEEeeC------CCcEEEEecccCCeeeEEeec--CC------------------
Q 019847 96 LEGHHR----RVAT-SSWNHWNGHILTSGSK------DKSIINHDVRVSNNVTSCIKA--HS------------------ 144 (335)
Q Consensus 96 ~~~~~~----~v~~-~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~--~~------------------ 144 (335)
+..... .+.+ ... .+..++.+.. +|.|..+|.++++.+-+.... ..
T Consensus 143 ~~~~~~~~~~~~~~~P~v---~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRV---VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EECSCTTSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eccCCCCCcceecCCCEE---ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 764211 1111 111 1334555543 589999999988765443211 00
Q ss_pred ----------CCEEEEEeecCCCEEEEEeCCCe-------------------EEEEEccCCCcccceeeccCCC------
Q 019847 145 ----------GEVCGLKWSNEGNLLASGGDDNV-------------------VRIWERSKMSSSKSLHRFTDHC------ 189 (335)
Q Consensus 145 ----------~~i~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~------ 189 (335)
.....+++.|+...++.++.++. |..+|.++++..-..+. ..|.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~-~~~~~wd~~~ 298 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQV-TPGDSWDFTA 298 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeec-CCCccccccC
Confidence 01124678888888888877763 88899877543222221 1121
Q ss_pred -CCeeEEEecCCCC--cEEEEecCCCCCeEEEEECCCCceEEEeecCC-------------cE-----------------
Q 019847 190 -GGVKALAWSPHQV--NVLATGGGREDGCIKIWNVQKGTCIHGIDAKA-------------QI----------------- 236 (335)
Q Consensus 190 -~~v~~~~~~~~~~--~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~-------------~~----------------- 236 (335)
.+.....+..+++ .+++.++ .+|.++++|.++|+.+...+... ++
T Consensus 299 ~~~~~~~d~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~ 376 (668)
T 1kv9_A 299 TQQITLAELNIDGKPRKVLMQAP--KNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPS 376 (668)
T ss_dssp CSCEEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSC
T ss_pred CCCcEEEEeccCCcEEEEEEEEC--CCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCC
Confidence 2222222333453 2455554 89999999999999885443211 00
Q ss_pred -------eEEEeCCCCceeeeeee------------------ee------------eecCCCeEEEEECCCCceeecccC
Q 019847 237 -------CGLEWNRHHKEILSGHG------------------FS------------ASGDGNKLCLWKYPNMTKVGELQS 279 (335)
Q Consensus 237 -------~~~~~~~~~~~~~~~~~------------------~~------------~~~~~~~i~i~d~~~~~~~~~~~~ 279 (335)
..++++|+...++.... +. ....++.|..||..+++.+-+...
T Consensus 377 ~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~ 456 (668)
T 1kv9_A 377 PFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY 456 (668)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE
T ss_pred CccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC
Confidence 12566776665543210 00 112358899999999998877654
Q ss_pred CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCC
Q 019847 280 SNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDED 318 (335)
Q Consensus 280 ~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~ 318 (335)
+. +.....+...+.+++.++.||.++.||..+++...+
T Consensus 457 ~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~ 494 (668)
T 1kv9_A 457 PT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ 494 (668)
T ss_dssp SS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheE
Confidence 33 233344555677899999999999999998765543
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.25 E-value=1.1e-07 Score=77.01 Aligned_cols=229 Identities=6% Similarity=0.003 Sum_probs=140.0
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCC--cEEEEecccCCee
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDK--SIINHDVRVSNNV 136 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~ 136 (335)
.....++|+++++++++-..++.|..||.... ....+. ....+..+++.+ +++++++..... .|..+|..++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~- 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTV- 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCE-
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeE-
Confidence 45788999999986666667899999997753 333332 345688999998 788666554332 466667655442
Q ss_pred eEEee-cCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccce------e--eccCCCCCeeEEEecCCCCcEEEE
Q 019847 137 TSCIK-AHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSL------H--RFTDHCGGVKALAWSPHQVNVLAT 207 (335)
Q Consensus 137 ~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~--~~~~~~~~v~~~~~~~~~~~~~~~ 207 (335)
..... ........++..+++..+++-..++.|+.+|...... +.. . .....-.....+ +|++..++++
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~-~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~ 184 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG-SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVS 184 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE-EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE-eEEEECCccccccccCCCCcCCCc--CcCCCEEEEE
Confidence 22211 1223345555555554455444588899998653210 000 0 001111234455 7888888887
Q ss_pred ecCCCCCeEEEEECCC-Cce--EEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce--eecccCCCC
Q 019847 208 GGGREDGCIKIWNVQK-GTC--IHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK--VGELQSSNS 282 (335)
Q Consensus 208 ~~g~~d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~--~~~~~~~~~ 282 (335)
.. ..+.|..+++.. ++. ...+........++++++|+..++. ...+.|.++|.. ++. +..+.....
T Consensus 185 d~--~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~------~~~~~V~~~~~~-G~~~~~~~~~~~~~ 255 (306)
T 2p4o_A 185 NT--EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGAT------HIYNSVVRIAPD-RSTTIIAQAEQGVI 255 (306)
T ss_dssp ET--TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEEC------BTTCCEEEECTT-CCEEEEECGGGTCT
T ss_pred eC--CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEe------CCCCeEEEECCC-CCEEEEeecccccC
Confidence 76 788999999874 321 1222222346678899999765543 447889999975 554 323443335
Q ss_pred ceeEeEEc---CCCCEEEEEeCCC
Q 019847 283 RILDLSQS---PDGLTVATAGADE 303 (335)
Q Consensus 283 ~i~~~~~~---~~~~~l~~~~~dg 303 (335)
..++++|. |+++.|+.++..+
T Consensus 256 ~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 256 GSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp TEEEEEECCSTTTTTEEEEEECTT
T ss_pred CceEEEEecccCCCCEEEEECCCC
Confidence 68899998 8877777665543
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.25 E-value=2.3e-08 Score=87.91 Aligned_cols=282 Identities=10% Similarity=0.032 Sum_probs=170.1
Q ss_pred CCceEEEec-CCeEEEEEe-cCCceeeEEeecCCCC--------C-ceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEe
Q 019847 26 RNNVLAVAL-GPVLFLWKW-ENGKVKKLLQVPGEDD--------Y-PTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 26 ~~~~~~~~~-~~~i~vw~~-~~~~~~~~~~~~~~~~--------~-v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 94 (335)
++.+++++. ++.|.-+|. .+++.+-.+....... . -..++. .+..+++++.|+.+..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 456777777 789999999 8998765554432110 0 011222 45678888889999999999999887
Q ss_pred eeccccc----ceeE-eeecCCCCCEEEEeeC------CCcEEEEecccCCeeeEEeecCCC------------------
Q 019847 95 NLEGHHR----RVAT-SSWNHWNGHILTSGSK------DKSIINHDVRVSNNVTSCIKAHSG------------------ 145 (335)
Q Consensus 95 ~~~~~~~----~v~~-~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~------------------ 145 (335)
....... .+.+ ... .+..++.++. ++.|..+|.++++.+-+.......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v---~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV---AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE---ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEE---ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 7653221 1211 111 1334555554 789999999988765443221100
Q ss_pred ------------------CE-EEEEeecCCCEEEEEeCC----------------CeEEEEEccCCCcccceeeccCC--
Q 019847 146 ------------------EV-CGLKWSNEGNLLASGGDD----------------NVVRIWERSKMSSSKSLHRFTDH-- 188 (335)
Q Consensus 146 ------------------~i-~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~~~-- 188 (335)
.+ ..+++.++...+..+..+ +.|..+|.++++..-..+. ..|
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~-~~~d~ 295 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQK-TPHDE 295 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEES-STTCS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecC-CCCcc
Confidence 00 135566766667666532 3588889877543222211 111
Q ss_pred ------CCCeeEEEecCCCC--cEEEEecCCCCCeEEEEECCCCceEEEeecCC--------------cE----------
Q 019847 189 ------CGGVKALAWSPHQV--NVLATGGGREDGCIKIWNVQKGTCIHGIDAKA--------------QI---------- 236 (335)
Q Consensus 189 ------~~~v~~~~~~~~~~--~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~--------------~~---------- 236 (335)
..++. +...++|+ .+++.+. .+|.++++|.++|+.+...+... ++
T Consensus 296 ~d~~~~~~p~l-~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~ 372 (571)
T 2ad6_A 296 WDFAGVNQMVL-TDQPVNGKMTPLLSHID--RNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMD 372 (571)
T ss_dssp SCCCCCCCCEE-EEEEETTEEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTT
T ss_pred cccccCCCCEE-EecccCCcEEEEEEEeC--CCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCC
Confidence 12221 22224564 3555554 79999999999999887765322 11
Q ss_pred ----------------eEEEeCCCCceeeeeeee-----------------eee--------------cCCCeEEEEECC
Q 019847 237 ----------------CGLEWNRHHKEILSGHGF-----------------SAS--------------GDGNKLCLWKYP 269 (335)
Q Consensus 237 ----------------~~~~~~~~~~~~~~~~~~-----------------~~~--------------~~~~~i~i~d~~ 269 (335)
..++++|+...+++...- ..+ ..++.+..||..
T Consensus 373 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~ 452 (571)
T 2ad6_A 373 HKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT 452 (571)
T ss_dssp CCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT
T ss_pred CCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECC
Confidence 235677777666554210 000 246899999999
Q ss_pred CCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q 019847 270 NMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 270 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~ 317 (335)
+++.+.++.... .+....+...+..++.++.||.|+.||..+++..-
T Consensus 453 tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 453 TGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp TCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 999887765322 23333333345677889999999999998877554
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.23 E-value=4.6e-07 Score=74.69 Aligned_cols=243 Identities=6% Similarity=-0.080 Sum_probs=152.7
Q ss_pred eeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCceeEeeecc
Q 019847 20 KVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKLVRNLEG 98 (335)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~ 98 (335)
.|.+..++.++..+....|+..+++........ .. ...+..++|++.+..|.... ..+.|..+++........+..
T Consensus 37 ~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~--~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 37 SCKALGPEPVLLFANRIDIRQVLPHRSEYTLLL--NN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp CEEESSSCCEEEEECBSCEEEECTTSCCEEEEE--CS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred cccccccCceeEeecccceEEEeCCCCeeEEee--cC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 445555555666667778888888776654332 22 34578999998766666554 578899999886654443333
Q ss_pred cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEe-CC-CeEEEEEccCC
Q 019847 99 HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGG-DD-NVVRIWERSKM 176 (335)
Q Consensus 99 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~ 176 (335)
.......+++.+..++++++-...+.|.+.++..... .............+++.|.+..|.... .. +.|..+++...
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 3345677888874666667777778999999874332 233333445678999999655555544 34 77888887642
Q ss_pred CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeee
Q 019847 177 SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFS 255 (335)
Q Consensus 177 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (335)
.. ..+ ....-.....++++|++..++.+-. ..+.|..+|+........+.. ......+++. .+....+
T Consensus 193 ~~-~~~--~~~~~~~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~t----- 261 (349)
T 3v64_C 193 GR-RII--ADTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWT----- 261 (349)
T ss_dssp SC-EES--CCSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEE-----
T ss_pred Cc-EEE--EECCCCCcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEe-----
Confidence 21 111 1122345789999998888888876 678999999875433322322 2345666663 3332222
Q ss_pred eecCCCeEEEEECCCCceeeccc
Q 019847 256 ASGDGNKLCLWKYPNMTKVGELQ 278 (335)
Q Consensus 256 ~~~~~~~i~i~d~~~~~~~~~~~ 278 (335)
....+.|..++..+++....+.
T Consensus 262 -d~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 262 -DWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -ETTTTEEEEEETTTCCSCEEEE
T ss_pred -cCCCCeEEEEEccCCCccEEec
Confidence 2557788888866665544443
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=1.4e-08 Score=79.26 Aligned_cols=207 Identities=11% Similarity=0.023 Sum_probs=136.1
Q ss_pred ceeEeeeccccc--ceeEeeecCCCCCEEEEeeC--CCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCC
Q 019847 90 SKLVRNLEGHHR--RVATSSWNHWNGHILTSGSK--DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDD 165 (335)
Q Consensus 90 ~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 165 (335)
.+.+.++. |.. ....+.|++ ++.++++.+. ++.|.++|+.+++.......+.......+++.. ++..++.-.+
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTC
T ss_pred ceEEEEEE-CCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecC
Confidence 34555554 443 357899998 6655555543 579999999987764443222222333455552 2444444567
Q ss_pred CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCC------cEeEE
Q 019847 166 NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKA------QICGL 239 (335)
Q Consensus 166 g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~------~~~~~ 239 (335)
+.+.++|..+.+ .+..+...... ...++++++.++++. .++.|.++|..+.+.+..+.... .+..+
T Consensus 86 ~~v~viD~~t~~---v~~~i~~g~~~--g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 86 NIGFIYDRRTLS---NIKNFTHQMKD--GWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp SEEEEEETTTTE---EEEEEECCSSS--CCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred CEEEEEECCCCc---EEEEEECCCCC--eEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcccccceeE
Confidence 899999977643 34444322111 233556788888775 37899999999999888887432 35677
Q ss_pred EeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC-------------CCceeEeEEcCCCC-EEEEEeCCCcE
Q 019847 240 EWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-------------NSRILDLSQSPDGL-TVATAGADETI 305 (335)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~-~l~~~~~dg~v 305 (335)
.|. ++...+. ...++.|.+.|..+++.+..+... ......|+|+|+++ +++++...+.+
T Consensus 158 e~~-dg~lyvn------~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v 230 (266)
T 2iwa_A 158 EYI-NGEVWAN------IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKL 230 (266)
T ss_dssp EEE-TTEEEEE------ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred EEE-CCEEEEe------cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeE
Confidence 777 5643332 255889999999999988877532 12458999999975 45556678889
Q ss_pred EEEecCCCC
Q 019847 306 RFWEAFGPS 314 (335)
Q Consensus 306 ~iw~~~~~~ 314 (335)
..-++....
T Consensus 231 ~~i~l~~~~ 239 (266)
T 2iwa_A 231 FEIKLHLVR 239 (266)
T ss_dssp EEEEEEECC
T ss_pred EEEEEeccc
Confidence 988887654
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.22 E-value=2e-08 Score=78.40 Aligned_cols=198 Identities=9% Similarity=0.077 Sum_probs=134.3
Q ss_pred cceeeeecC-CceEEEec---CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCcee
Q 019847 18 YSKVIDWGR-NNVLAVAL---GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKL 92 (335)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~---~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~ 92 (335)
+...+.+++ +.++.++. ++.|.++|..+++....+.+..+. ....+++ +++.|..+. .++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-fgeGi~~--~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-FGEGLTL--LNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-CEEEEEE--ETTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-ceEEEEE--eCCEEEEEEecCCEEEEEECCCCcE
Confidence 346688888 55665543 579999999999988877765432 2234455 455665555 578999999999999
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecC----CCCEEEEEeecCCCEEEEEeCCCeE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAH----SGEVCGLKWSNEGNLLASGGDDNVV 168 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i 168 (335)
+..+...... ....++ +++.++++..++.|.++|..+.+.......+. -..++.+.|. ++..++....++.|
T Consensus 99 ~~~i~~g~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 99 IKNFTHQMKD--GWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEECCSSS--CCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCCCC--eEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 9888643111 233444 66666666678999999998766544433221 1236788888 67655555567899
Q ss_pred EEEEccCCCcccceeec--------c--CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC
Q 019847 169 RIWERSKMSSSKSLHRF--------T--DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG 224 (335)
Q Consensus 169 ~iwd~~~~~~~~~~~~~--------~--~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~ 224 (335)
.+.|..++.....+..- . ......+.++|+|+++.+++++. ..+.+...++...
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk--~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK--LWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET--TCSEEEEEEEEEC
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC--CCCeEEEEEEecc
Confidence 99998875543333211 0 01135689999999999999986 7888998887653
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.22 E-value=2.1e-07 Score=77.79 Aligned_cols=253 Identities=6% Similarity=-0.076 Sum_probs=157.4
Q ss_pred eeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEE-ECCCcEEEEeCCCceeEeeeccc
Q 019847 21 VIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVG-YMDSKLQLWDAETSKLVRNLEGH 99 (335)
Q Consensus 21 ~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~ 99 (335)
|.+..+..++..+....|+..+++..+...... ....+..++|++.+..|... ...+.|..+++........+...
T Consensus 81 C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~~~---~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 81 CKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEECSSCCEEEEECBSCEEEECTTSCCCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred ECCccccceeEeecCccceeeccCCCcEEEEec---CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 344444556666677789999988776544332 23457899999866666555 46788999998866544433333
Q ss_pred ccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC-C-CeEEEEEccCCC
Q 019847 100 HRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD-D-NVVRIWERSKMS 177 (335)
Q Consensus 100 ~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~ 177 (335)
......+++.+..+.++++-...+.|.+.++..... .............+++.|.+..|..+.. . +.|..+++....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~ 236 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 236 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC
Confidence 345677888874666667767778899888864332 2333334456789999997666655543 3 678888876422
Q ss_pred cccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeee
Q 019847 178 SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSA 256 (335)
Q Consensus 178 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 256 (335)
. ..+ ....-.....++++|++..|+.+-. ..+.|..+|+........+.. ......+++. .+....+
T Consensus 237 ~-~~~--~~~~~~~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~t------ 304 (386)
T 3v65_B 237 R-RII--ADTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWT------ 304 (386)
T ss_dssp C-EEE--ECSSCSCEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEE------
T ss_pred c-EEE--EECCCCCeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEe------
Confidence 1 111 1222345789999998888888876 778999999875433323322 2345667763 3332222
Q ss_pred ecCCCeEEEEECCCCceeecccCCCCceeEeEE
Q 019847 257 SGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQ 289 (335)
Q Consensus 257 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 289 (335)
....+.|..++..+++.+..+.........+++
T Consensus 305 d~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp ETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred eCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 255788888887677665555433333344443
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.21 E-value=5.4e-08 Score=85.57 Aligned_cols=265 Identities=13% Similarity=0.090 Sum_probs=159.2
Q ss_pred eeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCC--CceE-EEEcCCCCEEEEEEC------CCcEEEEeCCCcee
Q 019847 22 IDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDD--YPTS-VSWSHDAKTLAVGYM------DSKLQLWDAETSKL 92 (335)
Q Consensus 22 ~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~--~v~~-~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~ 92 (335)
+...++.+++++.++.+..+|..+++..-...+..+.. .+.+ ... .+..+++++. +|.|..+|.++|+.
T Consensus 111 ~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 111 LAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGEL 188 (571)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCE
T ss_pred cEEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcE
Confidence 34456778888889999999999999876665543211 1111 111 2345666654 78999999999998
Q ss_pred Eeeecccccc-------------------------------------e-eEeeecCCCCCEEEEeeCC------------
Q 019847 93 VRNLEGHHRR-------------------------------------V-ATSSWNHWNGHILTSGSKD------------ 122 (335)
Q Consensus 93 ~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~~l~~~~~d------------ 122 (335)
+..+...... + ..+++.+ ....++.+..+
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCccCCC
Confidence 8776532111 0 1245555 44556555532
Q ss_pred ----CcEEEEecccCCeeeEEeec-C--------CCCEEEEEeecCCC---EEEEEeCCCeEEEEEccCCCcccceeecc
Q 019847 123 ----KSIINHDVRVSNNVTSCIKA-H--------SGEVCGLKWSNEGN---LLASGGDDNVVRIWERSKMSSSKSLHRFT 186 (335)
Q Consensus 123 ----g~i~~~d~~~~~~~~~~~~~-~--------~~~i~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 186 (335)
+.|..+|.++++..-..... | ..++. +...++|+ .++.++.+|.++++|.++++..-... +.
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~-~~ 345 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK-VD 345 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE-SS
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec-cc
Confidence 35899999887765443222 2 12222 22234673 67788889999999987654321111 00
Q ss_pred C-----------CCCCe--------------------------eEEEecCCCCcEEEEec--------------------
Q 019847 187 D-----------HCGGV--------------------------KALAWSPHQVNVLATGG-------------------- 209 (335)
Q Consensus 187 ~-----------~~~~v--------------------------~~~~~~~~~~~~~~~~~-------------------- 209 (335)
. ...++ ..++++|+...+++...
T Consensus 346 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~ 425 (571)
T 2ad6_A 346 PAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFV 425 (571)
T ss_dssp TTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCC
T ss_pred CCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccc
Confidence 0 00011 23567777665555421
Q ss_pred -----------C---CCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceee
Q 019847 210 -----------G---REDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVG 275 (335)
Q Consensus 210 -----------g---~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~ 275 (335)
+ ..++.|..||+.+++.+.+++...++........+..++.+ +.|+.++.+|.++++.+.
T Consensus 426 g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g------~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 426 GATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYA------TLDGYLKALDNKDGKELW 499 (571)
T ss_dssp CEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEE------CTTSEEEEEETTTCCEEE
T ss_pred cccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEE------cCCCeEEEEECCCCCEEE
Confidence 0 13589999999999998888765544333333334444444 679999999999999998
Q ss_pred cccCCCCc-eeEeEEcCCCCEEE
Q 019847 276 ELQSSNSR-ILDLSQSPDGLTVA 297 (335)
Q Consensus 276 ~~~~~~~~-i~~~~~~~~~~~l~ 297 (335)
+++..... -.-+.+..+|+.++
T Consensus 500 ~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 500 NFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp EEECSSCCCSCCEEEEETTEEEE
T ss_pred EEeCCCCcEeeeEEEEECCEEEE
Confidence 87644321 12234556776444
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.20 E-value=7.7e-08 Score=84.66 Aligned_cols=285 Identities=9% Similarity=0.024 Sum_probs=171.0
Q ss_pred CCceEEEec-CCeEEEEEe-cCCceeeEEeecCCCC---------CceEEEEcCCCCE----EEEEECCCcEEEEeCCCc
Q 019847 26 RNNVLAVAL-GPVLFLWKW-ENGKVKKLLQVPGEDD---------YPTSVSWSHDAKT----LAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 26 ~~~~~~~~~-~~~i~vw~~-~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~----l~~~~~dg~i~iw~~~~~ 90 (335)
++.+++++. ++.|.-+|. .+++.+-.+....... ....++++|.+.. +++++.|+.+..+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456777777 789999999 8998765554432110 1123556554444 888889999999999999
Q ss_pred eeEeeeccccc----ceeE-eeecCCCCCEEEEee------CCCcEEEEecccCCeeeEEeecCCC--------------
Q 019847 91 KLVRNLEGHHR----RVAT-SSWNHWNGHILTSGS------KDKSIINHDVRVSNNVTSCIKAHSG-------------- 145 (335)
Q Consensus 91 ~~~~~~~~~~~----~v~~-~~~~~~~~~~l~~~~------~dg~i~~~d~~~~~~~~~~~~~~~~-------------- 145 (335)
+.+........ .+.+ .... ++ .+++++ .+|.|+.+|.++++.+-+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 98877653221 1211 1111 33 455554 3799999999988765443221110
Q ss_pred ----------------------CE-EEEEeecCCCEEEEEeCC----------------CeEEEEEccCCCcccceeecc
Q 019847 146 ----------------------EV-CGLKWSNEGNLLASGGDD----------------NVVRIWERSKMSSSKSLHRFT 186 (335)
Q Consensus 146 ----------------------~i-~~~~~~~~~~~l~~~~~d----------------g~i~iwd~~~~~~~~~~~~~~ 186 (335)
.+ ..+++.++...+..+..+ +.|.-+|.++++..-..+. .
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~-~ 297 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK-T 297 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES-S
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec-C
Confidence 00 134566777777777655 3788899877543222211 1
Q ss_pred CC--------CCCeeEEEec-CCCC--cEEEEecCCCCCeEEEEECCCCceEEEeecCC--------------cE-----
Q 019847 187 DH--------CGGVKALAWS-PHQV--NVLATGGGREDGCIKIWNVQKGTCIHGIDAKA--------------QI----- 236 (335)
Q Consensus 187 ~~--------~~~v~~~~~~-~~~~--~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~--------------~~----- 236 (335)
.| ..++. +... .+|+ .+++.++ .+|.++++|.++|+.+...+... ++
T Consensus 298 ~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~ 374 (599)
T 1w6s_A 298 PHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPD--RNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEY 374 (599)
T ss_dssp TTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGG
T ss_pred CCccccccCCCccEE-EeccccCCcEEEEEEEEC--CCcEEEEEECCCCCEeecccccCCcccccccccCCCceeecccc
Confidence 12 12222 2222 4553 3555554 89999999999999887665221 11
Q ss_pred ---------------------eEEEeCCCCceeeeeee-------------------------eee--ec------CCCe
Q 019847 237 ---------------------CGLEWNRHHKEILSGHG-------------------------FSA--SG------DGNK 262 (335)
Q Consensus 237 ---------------------~~~~~~~~~~~~~~~~~-------------------------~~~--~~------~~~~ 262 (335)
..++++|+...+++... +.. .+ ..|.
T Consensus 375 ~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~ 454 (599)
T 1w6s_A 375 GTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQ 454 (599)
T ss_dssp CCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEE
T ss_pred CCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCe
Confidence 23566776665544210 001 01 4589
Q ss_pred EEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCC
Q 019847 263 LCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDED 318 (335)
Q Consensus 263 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~ 318 (335)
+.-||+.+++.+-+.... .+...-.....+.+++.++.||.++.||..+++..-+
T Consensus 455 l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~ 509 (599)
T 1w6s_A 455 IKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWK 509 (599)
T ss_dssp EEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEE
Confidence 999999999987766422 1122112233456788899999999999998776543
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.19 E-value=7.2e-07 Score=72.45 Aligned_cols=233 Identities=7% Similarity=-0.059 Sum_probs=145.5
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCC----ceeEeeecccccce
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAET----SKLVRNLEGHHRRV 103 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~----~~~~~~~~~~~~~v 103 (335)
++..+....|+..++++.+...... ....+..++|++.++.|..+. .++.|..+++.. ......+...-...
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~---~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECCCeEEEEECCCcceEehhc---CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 3455666789999998877544432 245678999999766665554 568999999875 22222232222456
Q ss_pred eEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCC--CeEEEEEccCCCcccc
Q 019847 104 ATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDD--NVVRIWERSKMSSSKS 181 (335)
Q Consensus 104 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~ 181 (335)
..+++.+..++++++-...+.|.++++.... ..............+++.|.+..|..+... +.|...++... ..+.
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~ 157 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYS 157 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCc-eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEE
Confidence 7888876456666666778899999987433 233333344567899999966666555543 68888887532 1111
Q ss_pred eeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec---CCcEeEEEeCCCCceeeeeeeeeeec
Q 019847 182 LHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA---KAQICGLEWNRHHKEILSGHGFSASG 258 (335)
Q Consensus 182 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (335)
+ ....-.....++++|++..++.+.. ..+.|..+|+........... ......+++.. +....+- .
T Consensus 158 ~--~~~~~~~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d------~ 226 (316)
T 1ijq_A 158 L--VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTD------I 226 (316)
T ss_dssp E--ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEE------T
T ss_pred E--EECCCCCceEEEEeccCCEEEEEEC--CCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEE------C
Confidence 1 1122345789999998888888876 678999999874333222222 23456677743 3333222 5
Q ss_pred CCCeEEEEECCCCceeecc
Q 019847 259 DGNKLCLWKYPNMTKVGEL 277 (335)
Q Consensus 259 ~~~~i~i~d~~~~~~~~~~ 277 (335)
..+.|..++..+++.+..+
T Consensus 227 ~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 227 INEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TTTEEEEEETTTCCCCEEE
T ss_pred CCCeEEEEeCCCCcceEEE
Confidence 5788988887776655444
No 252
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.16 E-value=1.4e-06 Score=73.20 Aligned_cols=249 Identities=7% Similarity=-0.061 Sum_probs=156.2
Q ss_pred ecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCc----eeEeeecc
Q 019847 24 WGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETS----KLVRNLEG 98 (335)
Q Consensus 24 ~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~----~~~~~~~~ 98 (335)
..+..++..+....|+..+++........ .....+..++|++.+..|.... ..+.|+.+++... .....+..
T Consensus 80 ~~~~~~ll~~~~~~I~~i~l~~~~~~~~~---~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~ 156 (400)
T 3p5b_L 80 VGSIAYLFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 156 (400)
T ss_dssp STTSCEEEEEETTEEEEECTTSCSCEEEE---CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS
T ss_pred ccccceeEEeccceeEEEccCCcceeEec---cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC
Confidence 34455677777889999999877654433 2345688999999766666554 5678999988652 22233333
Q ss_pred cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC--CCeEEEEEccCC
Q 019847 99 HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD--DNVVRIWERSKM 176 (335)
Q Consensus 99 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~ 176 (335)
.......+++.+..++++++-...+.|.+.+++.... .............|++.|.+..|..... .+.|...++...
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 3456778888774666777777788999999874432 3333334456789999997666666553 367888887642
Q ss_pred CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec---CCcEeEEEeCCCCceeeeeee
Q 019847 177 SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA---KAQICGLEWNRHHKEILSGHG 253 (335)
Q Consensus 177 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 253 (335)
.. ..+ ....-.....|++++++..|+.+-. ..+.|..+|+........... -.....+++. +..++..
T Consensus 236 ~~-~~~--~~~~l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywt-- 306 (400)
T 3p5b_L 236 DI-YSL--VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWT-- 306 (400)
T ss_dssp SC-EEE--ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEE--
T ss_pred cc-EEE--EECCCCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEe--
Confidence 21 111 1222346789999998888888876 678999999875443333332 1334566663 2233222
Q ss_pred eeeecCCCeEEEEECCCCceeecccCCCCceeEeE
Q 019847 254 FSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLS 288 (335)
Q Consensus 254 ~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~ 288 (335)
....+.|..+|..+++.+..+........++.
T Consensus 307 ---d~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 307 ---DIINEAIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp ---ESSSCSEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred ---cCCCCeEEEEEcCCCCceEEEecCCCCCceEE
Confidence 24577888888777766655543333344443
No 253
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.15 E-value=1.2e-06 Score=80.68 Aligned_cols=275 Identities=9% Similarity=0.041 Sum_probs=170.4
Q ss_pred ceeeeec-CCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 19 SKVIDWG-RNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 19 ~~~~~~~-~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
+.++... ++.+.+++.++.+..|+.++++...... ..+...|.++...+++.+ ..|+.++-+..||..+++......
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~l-wigt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIP-ILGTKQIQAILQQSPTRI-WVATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTEE-EEEEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecC-CCCCCeeEEEEEcCCCCE-EEEECCCCeEEEeCCCCeEEEeec
Confidence 5566655 4567776666679999988776543321 123467888888877764 445544459999988766443322
Q ss_pred c-------cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee-------cCCCCEEEEEeecCCCEEEEEe
Q 019847 98 G-------HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK-------AHSGEVCGLKWSNEGNLLASGG 163 (335)
Q Consensus 98 ~-------~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~ 163 (335)
. ....|.++...+ ++.+. .|+.+ -|.+||..+.. ...... .....|.++...++|. |..|+
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~-~g~lW-igt~~-Gl~~~~~~~~~-~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt 327 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDS-QNRLW-IGTFN-DLNIYHEGTDS-FASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGT 327 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECT-TSCEE-EEESS-CEEEEETTTTE-EEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEE
T ss_pred CCCCccccCCCeEEEEEEcC-CCCEE-EEeCC-hhheEcCCCCe-EEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEE
Confidence 1 135688888876 56544 45555 58888876443 222211 1235699999988877 55677
Q ss_pred CCCeEEEEEccCCCcccceeec----cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee--------
Q 019847 164 DDNVVRIWERSKMSSSKSLHRF----TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-------- 231 (335)
Q Consensus 164 ~dg~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-------- 231 (335)
.++-|..|+.....- ...... .-....|.++...+++...+.+ .++-|..||..+++......
T Consensus 328 ~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt----~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 328 YFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGT----NDGGLNLYNPITQRFTSYTLQEDESARG 402 (795)
T ss_dssp SSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEEEEE----SSSCEEEECTTTCCEEEECCC------C
T ss_pred CCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEEEEE----CCCCeEEEcCCCCcEEEEecCCCCcccC
Confidence 777799998654221 111110 0123468999998888533332 56789999988765443221
Q ss_pred -cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeeccc----CCCCceeEeEEcCCCCEEEEEeCCCcEE
Q 019847 232 -AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQ----SSNSRILDLSQSPDGLTVATAGADETIR 306 (335)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~v~ 306 (335)
....|.++...+++..+..| +.++.+..||..+++...... .+...|.++...++|.+.+.. .+ -+.
T Consensus 403 l~~~~v~~i~~d~~g~~lWig------t~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~ 474 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKSLVYIG------THAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-ALV 474 (795)
T ss_dssp CSCSCEEEEEEETTTTEEEEE------ETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEE
T ss_pred CCCccEEEEEEcCCCCEEEEE------eCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-cee
Confidence 13468888888888734334 346789999988765432211 234568999999888766544 44 577
Q ss_pred EEecCCC
Q 019847 307 FWEAFGP 313 (335)
Q Consensus 307 iw~~~~~ 313 (335)
.|+....
T Consensus 475 ~~~~~~~ 481 (795)
T 4a2l_A 475 RFNPEQR 481 (795)
T ss_dssp EEETTTT
T ss_pred EEeCCCC
Confidence 8887653
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.15 E-value=6.8e-07 Score=73.65 Aligned_cols=240 Identities=10% Similarity=0.001 Sum_probs=150.0
Q ss_pred ceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEe
Q 019847 61 PTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCI 140 (335)
Q Consensus 61 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 140 (335)
.+|.+..++ .+|+.+. ...|+..++...+....+. ....+..++|.+.++.++++-...+.|..+++..... ....
T Consensus 36 ~~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~ 111 (349)
T 3v64_C 36 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVV 111 (349)
T ss_dssp SCEEESSSC-CEEEEEC-BSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE
T ss_pred CcccccccC-ceeEeec-ccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eEEE
Confidence 455555553 3555543 4468888887655444333 3345789999985666666666788999999875442 2223
Q ss_pred ecCCCCEEEEEeecCC-CEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC-CeEEE
Q 019847 141 KAHSGEVCGLKWSNEG-NLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED-GCIKI 218 (335)
Q Consensus 141 ~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d-~~i~i 218 (335)
.........+++.+.+ +++++-...+.|.+.++..... . ......-.....++++|.+..++.+.. .. +.|..
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~--~l~~~~l~~P~~iavdp~~g~ly~td~--~~~~~I~r 186 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-K--VLLWQSLEKPRAIALHPMEGTIYWTDW--GNTPRIEA 186 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E--EEECTTCSCEEEEEEETTTTEEEEEEC--SSSCEEEE
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-E--EEEeCCCCCcceEEEecCcCeEEEecc--CCCCEEEE
Confidence 2233445788998754 4445555678899999764321 1 112223345789999998777887764 44 88999
Q ss_pred EECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEE
Q 019847 219 WNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVA 297 (335)
Q Consensus 219 ~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 297 (335)
+++.......... .-.....++++|++..+.... ...+.|..+|+........+.........+++. .+.+++
T Consensus 187 ~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD-----~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~ 260 (349)
T 3v64_C 187 SSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD-----AKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYW 260 (349)
T ss_dssp EETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEE
T ss_pred EeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEE-----CCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEE
Confidence 9986443322222 234578999999887776543 457899999987544333333333456778883 455555
Q ss_pred EEeCCCcEEEEecCCCCC
Q 019847 298 TAGADETIRFWEAFGPSG 315 (335)
Q Consensus 298 ~~~~dg~v~iw~~~~~~~ 315 (335)
+-...+.|..++..+++.
T Consensus 261 td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 261 TDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EETTTTEEEEEETTTCCS
T ss_pred ecCCCCeEEEEEccCCCc
Confidence 555677788887544443
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.15 E-value=1.5e-07 Score=82.87 Aligned_cols=286 Identities=13% Similarity=0.051 Sum_probs=168.2
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCc-------eEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYP-------TSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.++.+++++.++.|.-+|..+++.+-.+......... ..+++ .+..+++++.|+.|.-+|.++|+.+....
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 3466777776566999999999986655543221100 11222 35678888899999999999999887765
Q ss_pred cccc----cee-EeeecC--CCCC-EEEEee------CCCcEEEEecccCCeeeEEeecCCCCE----------------
Q 019847 98 GHHR----RVA-TSSWNH--WNGH-ILTSGS------KDKSIINHDVRVSNNVTSCIKAHSGEV---------------- 147 (335)
Q Consensus 98 ~~~~----~v~-~~~~~~--~~~~-~l~~~~------~dg~i~~~d~~~~~~~~~~~~~~~~~i---------------- 147 (335)
.... .+. ...... .+++ .+++++ .++.|..+|.++++.+-..-. ....+
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~-~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF-VEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES-STTCEEEETTEEEEESSCTTC
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC-CccccccccCccccccccccc
Confidence 3321 111 111111 0122 566655 378999999988776543211 10000
Q ss_pred -------------------------EEEEeecCCCEEEEEeC--------------------C----CeEEEEEccCCCc
Q 019847 148 -------------------------CGLKWSNEGNLLASGGD--------------------D----NVVRIWERSKMSS 178 (335)
Q Consensus 148 -------------------------~~~~~~~~~~~l~~~~~--------------------d----g~i~iwd~~~~~~ 178 (335)
..+++.|+..+++.+.. | +.|.-+|.++++.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 13456676677776663 2 5799999877543
Q ss_pred ccceeeccCCC--------CCeeEEEec-CCCC--cEEEEecCCCCCeEEEEECCCCceEEEeecCCc------------
Q 019847 179 SKSLHRFTDHC--------GGVKALAWS-PHQV--NVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQ------------ 235 (335)
Q Consensus 179 ~~~~~~~~~~~--------~~v~~~~~~-~~~~--~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~------------ 235 (335)
.-..+ ...|. .++. +... .+|+ .+++.++ .+|.++++|.++|+.+..++....
T Consensus 304 ~W~~q-~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g 379 (582)
T 1flg_A 304 KWFYQ-HTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHAD--RNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTG 379 (582)
T ss_dssp EEEEE-SSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTC
T ss_pred EEEEe-CCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEEC--CCceEEEEECCCCCEecccccccCccccccccccCC
Confidence 22221 11121 2222 2221 4554 3555554 899999999999998876654320
Q ss_pred --E--------------------------------eEEEeCCCCceeeeeeee------------------e--------
Q 019847 236 --I--------------------------------CGLEWNRHHKEILSGHGF------------------S-------- 255 (335)
Q Consensus 236 --~--------------------------------~~~~~~~~~~~~~~~~~~------------------~-------- 255 (335)
+ ..++++|+...+++...- .
T Consensus 380 ~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p 459 (582)
T 1flg_A 380 RPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKR 459 (582)
T ss_dssp CEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred CEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecC
Confidence 0 123556655555432110 0
Q ss_pred -eecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCCCCC
Q 019847 256 -ASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSGDED 318 (335)
Q Consensus 256 -~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~~~~ 318 (335)
....+|.|.-||+.+++.+-+..... ++..-.....+.+++.++.||.++.||..+++..-+
T Consensus 460 ~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 460 MYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp SCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEE
Confidence 01236899999999999876665332 222222223456788899999999999998876543
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.14 E-value=3.1e-07 Score=80.90 Aligned_cols=268 Identities=11% Similarity=0.089 Sum_probs=157.8
Q ss_pred eeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCC--Cce-EEEEcC---CCC-EEEEEEC------CCcEEEEeCC
Q 019847 22 IDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDD--YPT-SVSWSH---DAK-TLAVGYM------DSKLQLWDAE 88 (335)
Q Consensus 22 ~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~--~v~-~~~~~~---~~~-~l~~~~~------dg~i~iw~~~ 88 (335)
+...++.+++++.++.|.-+|.++|+..-......+.. .+. ...... +++ .+++++. +|.|.-+|.+
T Consensus 113 ~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~ 192 (582)
T 1flg_A 113 AAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPD 192 (582)
T ss_dssp CEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTT
T ss_pred cEEECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECC
Confidence 34456788888899999999999999876655543210 111 111111 233 5666543 7899999999
Q ss_pred CceeEeeecccccce-----------------------------------------eEeeecCCCCCEEEEeeC------
Q 019847 89 TSKLVRNLEGHHRRV-----------------------------------------ATSSWNHWNGHILTSGSK------ 121 (335)
Q Consensus 89 ~~~~~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~~l~~~~~------ 121 (335)
+|+.+.........+ ..+++.| ...+++.+..
T Consensus 193 tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~~~ 271 (582)
T 1flg_A 193 TGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGPWN 271 (582)
T ss_dssp TCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSSSC
T ss_pred CCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCccc
Confidence 999877553211000 1234555 5566665552
Q ss_pred --------------C----CcEEEEecccCCeeeEEeec-CC--------CCEEEEEee-cCCC---EEEEEeCCCeEEE
Q 019847 122 --------------D----KSIINHDVRVSNNVTSCIKA-HS--------GEVCGLKWS-NEGN---LLASGGDDNVVRI 170 (335)
Q Consensus 122 --------------d----g~i~~~d~~~~~~~~~~~~~-~~--------~~i~~~~~~-~~~~---~l~~~~~dg~i~i 170 (335)
| +.|..+|..+++..-..... |. .++. +... .+|+ .++.++.+|.+++
T Consensus 272 ~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~ 350 (582)
T 1flg_A 272 TWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYV 350 (582)
T ss_dssp GGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEE
T ss_pred CcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEE
Confidence 2 58999999988775543222 21 1222 2222 4664 7888999999999
Q ss_pred EEccCCCcccceeecc----------------------C---------CCC-----------CeeEEEecCCCCcEEEEe
Q 019847 171 WERSKMSSSKSLHRFT----------------------D---------HCG-----------GVKALAWSPHQVNVLATG 208 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~----------------------~---------~~~-----------~v~~~~~~~~~~~~~~~~ 208 (335)
+|.++++..-....-. . ... .-..++++|+...+++..
T Consensus 351 lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 351 VDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPA 430 (582)
T ss_dssp EETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEE
T ss_pred EECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEec
Confidence 9977654321111000 0 000 001345666655444432
Q ss_pred c------------------------------CCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeec
Q 019847 209 G------------------------------GREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASG 258 (335)
Q Consensus 209 ~------------------------------g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (335)
. ...+|.|..||+.+++.+-+.+...+...-.....+..++.+ +
T Consensus 431 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g------~ 504 (582)
T 1flg_A 431 NHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG------T 504 (582)
T ss_dssp ECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE------C
T ss_pred hhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE------C
Confidence 1 013688999999999998877765443322222234444444 7
Q ss_pred CCCeEEEEECCCCceeecccCCCCce-eEeEEcCCCCEEE
Q 019847 259 DGNKLCLWKYPNMTKVGELQSSNSRI-LDLSQSPDGLTVA 297 (335)
Q Consensus 259 ~~~~i~i~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~ 297 (335)
.|+.++.||.++++.+.+++...+.. .-+.+..+|+..+
T Consensus 505 ~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 505 GDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 79999999999999998887644322 2356667876433
No 257
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.13 E-value=6.8e-08 Score=73.93 Aligned_cols=185 Identities=12% Similarity=0.056 Sum_probs=124.5
Q ss_pred cccceeeeecCCceEEEecC---CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEE-ECCCcEEEEeCCCce
Q 019847 16 DYYSKVIDWGRNNVLAVALG---PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVG-YMDSKLQLWDAETSK 91 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~---~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~ 91 (335)
..+...+.|+++.++.++.. +.|+.+|+++++......++.+ .......+.++.|... -.++.+.+||.++.+
T Consensus 20 ~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~---~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP---YFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT---CCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred ccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC---cceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 35566788998877776643 4899999999999888776543 3333333445555554 468899999999999
Q ss_pred eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeec-CC---CCEEEEEeecCCCEEEEEeCCCe
Q 019847 92 LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKA-HS---GEVCGLKWSNEGNLLASGGDDNV 167 (335)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~---~~i~~~~~~~~~~~l~~~~~dg~ 167 (335)
.+.++.... .-..+++ ++..|+.+..++.|.++|..+.+........ +. ..++.+.|. +|+.++....+..
T Consensus 97 ~~~ti~~~~-~Gwglt~---dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 97 PRARFRYPG-EGWALTS---DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEEEECSS-CCCEEEE---CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred EEEEEeCCC-CceEEee---CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe
Confidence 999987543 2345554 5666666667899999999876654333221 11 345667765 6666665556778
Q ss_pred EEEEEccCCCcccceeec--c--------CCCCCeeEEEecCCCCcEEEEe
Q 019847 168 VRIWERSKMSSSKSLHRF--T--------DHCGGVKALAWSPHQVNVLATG 208 (335)
Q Consensus 168 i~iwd~~~~~~~~~~~~~--~--------~~~~~v~~~~~~~~~~~~~~~~ 208 (335)
|.+.|.+++.....+..- . ....-.+.++++|+++.++++|
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 999997775432222211 0 1123468999999999999987
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.12 E-value=5.3e-07 Score=79.36 Aligned_cols=260 Identities=12% Similarity=0.069 Sum_probs=152.1
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCCCC--CceE-EEEcCCCCEEEEEE------CCCcEEEEeCCCceeEeeeccc
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGEDD--YPTS-VSWSHDAKTLAVGY------MDSKLQLWDAETSKLVRNLEGH 99 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~--~v~~-~~~~~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~ 99 (335)
+++++.++.+..+|..+|+..-...+..+.. .+.+ ..+. ++ .+++++ .+|.|+.+|.++|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 8888889999999999999866555433210 1111 1111 34 566655 3799999999999988776532
Q ss_pred ccce--------------------------------------eEeeecCCCCCEEEEeeCC----------------CcE
Q 019847 100 HRRV--------------------------------------ATSSWNHWNGHILTSGSKD----------------KSI 125 (335)
Q Consensus 100 ~~~v--------------------------------------~~~~~~~~~~~~l~~~~~d----------------g~i 125 (335)
.... ..+++.+ ...+++.+..+ +.|
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcccCCCccccceE
Confidence 2110 1234555 56667766654 379
Q ss_pred EEEecccCCeeeEEeecCC---------CCEEEEEee-cCC---CEEEEEeCCCeEEEEEccCCCcccceeecc------
Q 019847 126 INHDVRVSNNVTSCIKAHS---------GEVCGLKWS-NEG---NLLASGGDDNVVRIWERSKMSSSKSLHRFT------ 186 (335)
Q Consensus 126 ~~~d~~~~~~~~~~~~~~~---------~~i~~~~~~-~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------ 186 (335)
..+|.++++..-.....+. .++. +... .+| ..++.++.+|.++++|.++++..-......
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccccc
Confidence 9999998776544332221 1222 2222 466 467778899999999987654321111000
Q ss_pred ----CCCCCe--------------------------eEEEecCCCCcEEEEec---------------------------
Q 019847 187 ----DHCGGV--------------------------KALAWSPHQVNVLATGG--------------------------- 209 (335)
Q Consensus 187 ----~~~~~v--------------------------~~~~~~~~~~~~~~~~~--------------------------- 209 (335)
....++ ..++++|+...+++...
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 000000 23456666543333210
Q ss_pred ---CC------CCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC
Q 019847 210 ---GR------EDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS 280 (335)
Q Consensus 210 ---g~------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 280 (335)
.. .+|.+..||+.+++.+-..+...+...-.....+..++. ++.|+.++.||.++++.+.+++..
T Consensus 440 ~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~------gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFY------GTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp ECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEE------ECTTSEEEEEETTTCCEEEEEECS
T ss_pred cCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEE------ECCCCeEEEEECCCCCEEEEeeCC
Confidence 00 247899999999998887765433221111223333333 477999999999999999887644
Q ss_pred CCce-eEeEEcCCCC-EEEE
Q 019847 281 NSRI-LDLSQSPDGL-TVAT 298 (335)
Q Consensus 281 ~~~i-~~~~~~~~~~-~l~~ 298 (335)
...+ .-+.+..+|+ |+++
T Consensus 514 ~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 514 SGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp SCCCSCCEEEEETTEEEEEE
T ss_pred CCcEeccEEEEeCCEEEEEE
Confidence 3321 2355566775 4443
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.11 E-value=1.8e-06 Score=79.44 Aligned_cols=273 Identities=10% Similarity=0.038 Sum_probs=172.9
Q ss_pred ccceeeeecC-CceEEEecCCeEEEEEecCCceeeEEeec----CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 17 YYSKVIDWGR-NNVLAVALGPVLFLWKWENGKVKKLLQVP----GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~i~vw~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
-.+.++..++ +.+.+++.++.|..|+..++......... -....|.++...++|+ |..|+.++-|..|+..+++
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQR 388 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCC
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCc
Confidence 4566777666 56777777788999998766543322111 1245689999888886 5567777779999988765
Q ss_pred eEeeecc--------cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee----cCCCCEEEEEeecCCCEE
Q 019847 92 LVRNLEG--------HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK----AHSGEVCGLKWSNEGNLL 159 (335)
Q Consensus 92 ~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l 159 (335)
....... ....|.++...+ ++++|..|+.++-+..+|..++.. ..... .....|.++...+++++.
T Consensus 389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 389 FTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQV-ENFNQRNSQLVNENVYAILPDGEGNLW 466 (795)
T ss_dssp EEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCE-EEECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred EEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcE-EEeecCCCCcCCCeeEEEEECCCCCEE
Confidence 4432211 235688888876 677577788877899999875542 22111 134578999988888755
Q ss_pred EEEeCCCeEEEEEccCCCcccceeec----cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee----
Q 019847 160 ASGGDDNVVRIWERSKMSSSKSLHRF----TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID---- 231 (335)
Q Consensus 160 ~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~---- 231 (335)
+. +.+ -+.+||..+... ...... .-....|.++...+++...+.+ . +-+..||..+++. .+.
T Consensus 467 ig-t~~-Gl~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt----~-~Gl~~~~~~~~~~--~~~~~~~ 536 (795)
T 4a2l_A 467 LG-TLS-ALVRFNPEQRSF-TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG----E-EGLSVFKQEGLDI--QKASILP 536 (795)
T ss_dssp EE-ESS-CEEEEETTTTEE-EECCBCTTCCBCCCCCEEEEEECTTCCEEEEE----S-SCEEEEEEETTEE--EECCCSC
T ss_pred EE-ecC-ceeEEeCCCCeE-EEccccccccccCCceEEEEEECCCCCEEEEe----C-CceEEEeCCCCeE--EEecCCC
Confidence 54 444 588898664321 111110 1123568999999888544432 3 5688899877665 222
Q ss_pred ----cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeec--ccC-CCCceeEeEEcCCCCEEEEEeCCCc
Q 019847 232 ----AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE--LQS-SNSRILDLSQSPDGLTVATAGADET 304 (335)
Q Consensus 232 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~--~~~-~~~~i~~~~~~~~~~~l~~~~~dg~ 304 (335)
....+.++..+++|...+.. .+.+..||..+.+...- ..+ ....|.++...++|++.+++ .+ -
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWigT--------~~Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t-~~-G 606 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWVGT--------REGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST-NR-G 606 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEEEE--------SSCEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE-TT-E
T ss_pred CCCCCCCeeEEEEECCCCCEEEEe--------CCCceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc-CC-c
Confidence 12368889999998866543 34688888776543321 111 23458889999999866655 33 4
Q ss_pred EEEEecCC
Q 019847 305 IRFWEAFG 312 (335)
Q Consensus 305 v~iw~~~~ 312 (335)
|..|+...
T Consensus 607 l~~~~~~~ 614 (795)
T 4a2l_A 607 ISCFNPET 614 (795)
T ss_dssp EEEEETTT
T ss_pred eEEEcCCC
Confidence 55666554
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.10 E-value=6.2e-07 Score=74.98 Aligned_cols=240 Identities=9% Similarity=-0.005 Sum_probs=150.4
Q ss_pred eEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee
Q 019847 62 TSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK 141 (335)
Q Consensus 62 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 141 (335)
.|.+..+ ..+|+.+. ...|+..++...+...... ....+..++|.+.++.++++-...+.|..+++..... .....
T Consensus 80 ~C~~~~~-~~~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~ 155 (386)
T 3v65_B 80 SCKALGP-EPVLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVS 155 (386)
T ss_dssp CEEECSS-CCEEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEEC
T ss_pred eECCccc-cceeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEe
Confidence 4545444 33555543 4578889987665444443 3456789999985666666666788999999875432 23232
Q ss_pred cCCCCEEEEEeecCCC-EEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC-CeEEEE
Q 019847 142 AHSGEVCGLKWSNEGN-LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED-GCIKIW 219 (335)
Q Consensus 142 ~~~~~i~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d-~~i~i~ 219 (335)
........+++.+.+. ++++-...+.|.+.++..... .............++++|.+..++.+.. .. +.|..+
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~---~~l~~~~l~~P~giavdp~~g~ly~td~--~~~~~I~r~ 230 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR---KVLLWQSLEKPRAIALHPMEGTIYWTDW--GNTPRIEAS 230 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEEC--SSSCEEEEE
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce---EEeecCCCCCCcEEEEEcCCCeEEEecc--CCCCEEEEE
Confidence 2333456788887544 445555567888888764221 1112223355789999998877887764 44 789999
Q ss_pred ECCCCceEEEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEE
Q 019847 220 NVQKGTCIHGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVAT 298 (335)
Q Consensus 220 d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 298 (335)
++........... -.....++++|++..|+... ...+.|..+|+........+.........+++ ..+.++++
T Consensus 231 ~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD-----~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~t 304 (386)
T 3v65_B 231 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVD-----AKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWT 304 (386)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEE-----TTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEE
T ss_pred eCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEE-----CCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEe
Confidence 9875433333322 33578899998877776543 55789999998754433333333345677888 34555566
Q ss_pred EeCCCcEEEEecCCCCCC
Q 019847 299 AGADETIRFWEAFGPSGD 316 (335)
Q Consensus 299 ~~~dg~v~iw~~~~~~~~ 316 (335)
-...+.|..++..+++..
T Consensus 305 d~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp ETTTTEEEEEETTTCCSC
T ss_pred eCCCCeEEEEECCCCcce
Confidence 667788888885554443
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.10 E-value=4.1e-08 Score=75.78 Aligned_cols=183 Identities=11% Similarity=0.038 Sum_probs=123.4
Q ss_pred ccceeeeecCCceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEE-ECCCcEEEEeCCCceeEe
Q 019847 17 YYSKVIDWGRNNVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVG-YMDSKLQLWDAETSKLVR 94 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~ 94 (335)
.+...+.++++.++.++ .+|.|+++|+++++..... +.. ........++++.|... -.++.+.+||.++.+.+.
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~---~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLG---NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECT---TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC---CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 34567888887766554 5678999999999988777 653 23332233345555444 468899999999999999
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeec-CC---CCEEEEEeecCCCEEEEEeCCCeEEE
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKA-HS---GEVCGLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~---~~i~~~~~~~~~~~l~~~~~dg~i~i 170 (335)
++.... .-..+++ ++..|+.+..++.|.++|..+.+........ +. ..++.+.|. +|+.++....+..|.+
T Consensus 131 ti~~~~-eGwGLt~---Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 131 TTRYSG-EGWGLCY---WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEECSS-CCCCEEE---ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EEeCCC-ceeEEec---CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence 987533 2345554 6677777777999999999877654333221 21 245677777 6766665556789999
Q ss_pred EEccCCCcccceeec----------cCCCCCeeEEEecCCCCcEEEEe
Q 019847 171 WERSKMSSSKSLHRF----------TDHCGGVKALAWSPHQVNVLATG 208 (335)
Q Consensus 171 wd~~~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~~~~ 208 (335)
.|.+++.....+..- .....-.+.++++|+++.++++|
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 998775433222210 01123568999999999999987
No 262
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.09 E-value=8e-08 Score=74.15 Aligned_cols=184 Identities=13% Similarity=0.134 Sum_probs=123.4
Q ss_pred ccceeeeecCCceEEEe-cCC--eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCcee
Q 019847 17 YYSKVIDWGRNNVLAVA-LGP--VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKL 92 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~-~~~--~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~ 92 (335)
.+...+.|+++.++.++ .+| .|+++|+++++......+.. ........++++.|.... .++.+.+||.++.+.
T Consensus 43 ~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~---~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 43 AFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK---RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp CEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT---TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred cccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC---ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 34467888877665554 344 89999999999988777643 344433444566666655 588999999999999
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeec-CC---CCEEEEEeecCCCEEEEEeCCCeE
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKA-HS---GEVCGLKWSNEGNLLASGGDDNVV 168 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~---~~i~~~~~~~~~~~l~~~~~dg~i 168 (335)
+.++.... .-..++ + ++..|+.+..++.|.++|..+.+........ .. ..++.+.|. +|+..+..-.+..|
T Consensus 120 ~~ti~~~~-eG~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 120 VRSFNYDG-EGWGLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp EEEEECSS-CCCCEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCC-CceEEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 99987533 223444 3 6666777666888999999877654443221 11 345667776 67666666568899
Q ss_pred EEEEccCCCcccceee--cc-------CCCCCeeEEEecCCCCcEEEEe
Q 019847 169 RIWERSKMSSSKSLHR--FT-------DHCGGVKALAWSPHQVNVLATG 208 (335)
Q Consensus 169 ~iwd~~~~~~~~~~~~--~~-------~~~~~v~~~~~~~~~~~~~~~~ 208 (335)
.+.|.+++.....+.. +. ....-.+.++++|+++.++++|
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 9999776543322221 11 1123468999999999999987
No 263
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=3.7e-08 Score=84.83 Aligned_cols=191 Identities=12% Similarity=0.062 Sum_probs=131.5
Q ss_pred CCCEEEEee-CCCcEEEEecccCCeeeEEeecCCCCEEEEEe-e-cCCCEEEEEe------------------CCCeEEE
Q 019847 112 NGHILTSGS-KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKW-S-NEGNLLASGG------------------DDNVVRI 170 (335)
Q Consensus 112 ~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~-~-~~~~~l~~~~------------------~dg~i~i 170 (335)
++++++... .++.|.+.|+.+.+...............+++ + |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 445555554 45679999998766433221223356788887 5 8999998885 2357889
Q ss_pred EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC-----------------------------------Ce
Q 019847 171 WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED-----------------------------------GC 215 (335)
Q Consensus 171 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d-----------------------------------~~ 215 (335)
.|..+.+ ....+.-.. ....++++|+|+++++++..++. +.
T Consensus 180 ID~~t~~---v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 180 VDADKWE---VAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EETTTTE---EEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EECCCCe---EEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9977643 233322111 34567899999988888742111 24
Q ss_pred EEEEECCC--Cce-EEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc------------eeecccCC
Q 019847 216 IKIWNVQK--GTC-IHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT------------KVGELQSS 280 (335)
Q Consensus 216 i~i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~------------~~~~~~~~ 280 (335)
|.+.|.++ ++. +..++......++.++|+|+++++.. ..+..|.++|+.+.+ .+.++..
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~-----~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v- 329 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAG-----KLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL- 329 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEEC-----TTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeC-----CCCCeEEEEECcccccccccccCcccceEEEcCC-
Confidence 78888887 555 66777777888999999999987653 568999999998653 2333332
Q ss_pred CCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 281 NSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 281 ~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
......++|+|+|...++.-.|+.|..|++..
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 23478899999995455666799999999986
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.04 E-value=3.2e-06 Score=77.63 Aligned_cols=275 Identities=10% Similarity=0.002 Sum_probs=165.0
Q ss_pred cceeeeecC-CceEEEecCCeEEEEEecCCceeeEEeec-----CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 18 YSKVIDWGR-NNVLAVALGPVLFLWKWENGKVKKLLQVP-----GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~~i~vw~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
.+.++...+ +.+.+++.+ .+.+||..+++........ -....|.++...++|. |..|+..+-|.++|..+++
T Consensus 212 ~i~~i~~d~~g~lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~ 289 (781)
T 3v9f_A 212 DVRCIYKDTNGNIWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQ 289 (781)
T ss_dssp SEEEEEECTTCCEEEEETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC-
T ss_pred ceeEEEEcCCCCEEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCe
Confidence 456666655 456666655 7999998777654332111 1245689998888775 5566664568999987765
Q ss_pred eEeeec--------------ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEe---------ecCCCCEE
Q 019847 92 LVRNLE--------------GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCI---------KAHSGEVC 148 (335)
Q Consensus 92 ~~~~~~--------------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------~~~~~~i~ 148 (335)
...... .....|.++...+ ++. |..|+.++-|..++.....- .... ......|.
T Consensus 290 ~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~ 366 (781)
T 3v9f_A 290 FLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNN-IWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVS 366 (781)
T ss_dssp --------CEEECBCSSTTSBSSSCEEEEEECS-SCC-EEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEE
T ss_pred eeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCC-EEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceE
Confidence 322111 1235688888776 554 66677777888888764332 1111 01235689
Q ss_pred EEEeecCCCEEEEEeCCCeEEEEEccCCCccccee-eccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 149 GLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLH-RFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 149 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
++...++++ |..|+.++-|..||..+... .... ........|.++...+++. +.+.. .++-+..+|.++++..
T Consensus 367 ~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~-lWigt---~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 367 SVCDDGQGK-LWIGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGN-LWFGT---YLGNISYYNTRLKKFQ 440 (781)
T ss_dssp EEEECTTSC-EEEEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSC-EEEEE---TTEEEEEECSSSCEEE
T ss_pred EEEEcCCCC-EEEEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCC-EEEEe---ccCCEEEEcCCCCcEE
Confidence 998887776 55566566688898653211 1110 0012345688998888875 44422 4677999998776543
Q ss_pred EEee---cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC-----CCceeEeEEcCCCCEEEEE
Q 019847 228 HGID---AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-----NSRILDLSQSPDGLTVATA 299 (335)
Q Consensus 228 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~ 299 (335)
.... ....+.++...+++...+.. .+.+..||..+++........ ...|.++...++|.+.+ |
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwigt--------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-g 511 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWIGT--------HAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-G 511 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEEEE--------TTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-E
T ss_pred EeccCCCCCCeEEEEEECCCCCEEEEE--------CCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-E
Confidence 3221 23568888888888765543 367889998765543222111 35689999999987665 4
Q ss_pred eCCCcEEEEecCC
Q 019847 300 GADETIRFWEAFG 312 (335)
Q Consensus 300 ~~dg~v~iw~~~~ 312 (335)
+.++-+..|+...
T Consensus 512 t~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 512 TFGGGVGIYTPDM 524 (781)
T ss_dssp ESSSCEEEECTTC
T ss_pred EcCCCEEEEeCCC
Confidence 4433466677654
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.04 E-value=2.4e-06 Score=66.30 Aligned_cols=204 Identities=15% Similarity=0.209 Sum_probs=138.0
Q ss_pred eecCCCCCceEEEEcCCCCEEE-EEECCCcEEEEeCCCceeEeeecc-cccceeEeeecCCCCCEEEEeeCCCcEEEEec
Q 019847 53 QVPGEDDYPTSVSWSHDAKTLA-VGYMDSKLQLWDAETSKLVRNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 53 ~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~ 130 (335)
.+++-...+..++|+|+++.|+ +...++.|...|.. ++.++.+.- .....-.+++.+ ++.++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEEEc
Confidence 4566667899999999876555 46678899999987 887777642 224567788877 7777677667788999988
Q ss_pred ccCCee--eEEee------cCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeec-------cCCCCCeeEE
Q 019847 131 RVSNNV--TSCIK------AHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRF-------TDHCGGVKAL 195 (335)
Q Consensus 131 ~~~~~~--~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~v~~~ 195 (335)
.....+ ..... ........++|+|+++.|.++.+.....+|.++.......+... ..+...+..+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 755431 12111 23445689999998877777776555555555421111111111 1123457899
Q ss_pred EecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC----------CcEeEEEeCCCCceeeeeeeeeeecCCCeEEE
Q 019847 196 AWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK----------AQICGLEWNRHHKEILSGHGFSASGDGNKLCL 265 (335)
Q Consensus 196 ~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 265 (335)
+++|....+++.+. ..+.+..+|.. ++.+..+... .....+++.++|...++ ++.+.++.
T Consensus 179 ~~dp~tg~lliLS~--~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-------sE~n~~y~ 248 (255)
T 3qqz_A 179 EFNQQKNTLLVLSH--ESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-------SEPNRFYR 248 (255)
T ss_dssp EEETTTTEEEEEET--TTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-------ETTTEEEE
T ss_pred EEcCCCCeEEEEEC--CCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-------cCCceEEE
Confidence 99999888888876 88999999965 6666666543 26789999999986555 45666666
Q ss_pred EEC
Q 019847 266 WKY 268 (335)
Q Consensus 266 ~d~ 268 (335)
|.-
T Consensus 249 f~~ 251 (255)
T 3qqz_A 249 FTP 251 (255)
T ss_dssp EEC
T ss_pred EEe
Confidence 653
No 266
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.04 E-value=1.8e-07 Score=72.20 Aligned_cols=179 Identities=14% Similarity=0.188 Sum_probs=119.3
Q ss_pred ceEEEEcCCCCEEEEEECCC--cEEEEeCCCceeEeeecccccceeE--eeecCCCCCEEEEeeCCCcEEEEecccCCee
Q 019847 61 PTSVSWSHDAKTLAVGYMDS--KLQLWDAETSKLVRNLEGHHRRVAT--SSWNHWNGHILTSGSKDKSIINHDVRVSNNV 136 (335)
Q Consensus 61 v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 136 (335)
...+.|+ ++.+..+.+.+| .|+++|+++++.+..+.... .... +... .+.+.+..-.++.+.+||..+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEE
Confidence 3788898 666666666665 89999999999988876433 3322 3442 4455555556889999999877764
Q ss_pred eEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeecc-CC-CCCeeEEEecCCCCcEEEEecCCCCC
Q 019847 137 TSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFT-DH-CGGVKALAWSPHQVNVLATGGGREDG 214 (335)
Q Consensus 137 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~-~~~v~~~~~~~~~~~~~~~~~g~~d~ 214 (335)
...-.+..+ ..++++++.|+.+..++.|.++|..+......+..-. +. -..++.+.|. +| .+++..- .++
T Consensus 121 ~ti~~~~eG----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w--~~~ 192 (262)
T 3nol_A 121 RSFNYDGEG----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANVW--QTN 192 (262)
T ss_dssp EEEECSSCC----CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEET--TSS
T ss_pred EEEECCCCc----eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEEc--cCC
Confidence 443322221 2334667777777767889999977654433333211 11 1335567876 55 5666654 688
Q ss_pred eEEEEECCCCceEEEeecC-------------CcEeEEEeCCCCceeeee
Q 019847 215 CIKIWNVQKGTCIHGIDAK-------------AQICGLEWNRHHKEILSG 251 (335)
Q Consensus 215 ~i~i~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ 251 (335)
.|.+.|.++++.+..+... .-.+.++++|+++.+++.
T Consensus 193 ~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 193 KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 9999999999999888752 245889999987766543
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.02 E-value=1.8e-06 Score=70.01 Aligned_cols=238 Identities=8% Similarity=-0.040 Sum_probs=146.8
Q ss_pred CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEE-ECCCcEEEEeCCCceeE-eeeccccccee
Q 019847 27 NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVG-YMDSKLQLWDAETSKLV-RNLEGHHRRVA 104 (335)
Q Consensus 27 ~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~-~~~~~~~~~v~ 104 (335)
..++..+....|+..+++...........+ ...+..++|.+.+..|... ...+.|..+++..+... ..+...-....
T Consensus 4 ~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 4 APLLLYANRRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp CCEEEEECEEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred ccEEEEEccCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 345556667889999998764211111111 2346789999865555544 46778999998765321 12222224566
Q ss_pred EeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC--CCeEEEEEccCCCcccce
Q 019847 105 TSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD--DNVVRIWERSKMSSSKSL 182 (335)
Q Consensus 105 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~ 182 (335)
.+++.+..++++++-...+.|.++++..... .............+++.|.+..|..+.. .+.|...++.... ...+
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~ 160 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFII 160 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEE
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEE
Confidence 7888764666777767778999999874332 2223344456789999997666666553 5788888876321 1111
Q ss_pred eeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCC
Q 019847 183 HRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGN 261 (335)
Q Consensus 183 ~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (335)
....-.....++++|++..++.+-+ ..+.|..+|+.......... .......+++..+ .++. +-...+
T Consensus 161 --~~~~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~--~lyw-----td~~~~ 229 (318)
T 3sov_A 161 --INSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYW-----TDWSTH 229 (318)
T ss_dssp --ECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT--EEEE-----EETTTT
T ss_pred --EECCCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC--EEEE-----EecCCC
Confidence 1122345689999998888888876 78899999987433322222 2234566666433 2222 125578
Q ss_pred eEEEEECCCCceeeccc
Q 019847 262 KLCLWKYPNMTKVGELQ 278 (335)
Q Consensus 262 ~i~i~d~~~~~~~~~~~ 278 (335)
.|..++..+++....+.
T Consensus 230 ~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 230 SILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEETTTCCSCEEEE
T ss_pred eEEEEECCCCCceEEEe
Confidence 89999987776655443
No 268
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.01 E-value=1.4e-07 Score=72.79 Aligned_cols=177 Identities=11% Similarity=0.062 Sum_probs=119.1
Q ss_pred ceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeE--eeecCCCCCEEEEeeCCCcEEEEecccCCeeeE
Q 019847 61 PTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVAT--SSWNHWNGHILTSGSKDKSIINHDVRVSNNVTS 138 (335)
Q Consensus 61 v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 138 (335)
...+.|+ ++.+..+.+.+|.|+++|+++++.+..+ .. ..... +... .+.+.+..-.++.+.+||..+.+.+..
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 4688887 3555566677889999999999988887 22 33322 4443 456666666789999999987665444
Q ss_pred EeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccC--CCCCeeEEEecCCCCcEEEEecCCCCCeE
Q 019847 139 CIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTD--HCGGVKALAWSPHQVNVLATGGGREDGCI 216 (335)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~g~~d~~i 216 (335)
+.. ...-..++ ++++.|+.+..++.|.++|..+.+....+..-.. .-..++.+.|. +| .+++..- .++.|
T Consensus 132 -i~~-~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw--~s~~I 203 (268)
T 3nok_A 132 -TRY-SGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANIW--HSSDV 203 (268)
T ss_dssp -EEC-SSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEET--TCSEE
T ss_pred -EeC-CCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEEC--CCCeE
Confidence 332 22223343 5677888877789999999776544333322111 11235677877 55 5666654 68899
Q ss_pred EEEECCCCceEEEeecC--------------CcEeEEEeCCCCceeee
Q 019847 217 KIWNVQKGTCIHGIDAK--------------AQICGLEWNRHHKEILS 250 (335)
Q Consensus 217 ~i~d~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 250 (335)
.+.|.++++.+..+... .-.+.++++|+++.+++
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEE
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEE
Confidence 99999999999888642 24688999998665544
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.99 E-value=5.9e-06 Score=67.05 Aligned_cols=232 Identities=12% Similarity=0.024 Sum_probs=143.5
Q ss_pred EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccC---CeeeEEeecCCCCEE
Q 019847 72 TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVS---NNVTSCIKAHSGEVC 148 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~i~ 148 (335)
+|+.+. ...|+..|+.+.+....+. ....+..++|.+.++.++++-..++.|..+++... ...............
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 455554 3469999998876555444 34567899999845566666667789999998751 222222222224457
Q ss_pred EEEeecCCC-EEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 149 GLKWSNEGN-LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 149 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
.+++.+.+. ++++-...+.|.+.++..... ..+ ..........++++|.+..++.+..+ ..+.|...++.. ...
T Consensus 81 glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~--~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG-~~~ 155 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL--FRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG-VDI 155 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEE--EECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTS-CCE
T ss_pred EEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEE--EECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCC-CCe
Confidence 889987444 445556678999999764221 111 12233467899999977777777641 237898888763 333
Q ss_pred EEee--cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeeccc--CCCCceeEeEEcCCCCEEEEEeCCC
Q 019847 228 HGID--AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQ--SSNSRILDLSQSPDGLTVATAGADE 303 (335)
Q Consensus 228 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg 303 (335)
..+. .-.....+++++++..++... ...+.|..+|+.......... ........+++. .+.++++-...+
T Consensus 156 ~~~~~~~~~~P~gla~d~~~~~lY~~D-----~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~ 229 (316)
T 1ijq_A 156 YSLVTENIQWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 229 (316)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred EEEEECCCCCceEEEEeccCCEEEEEE-----CCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCC
Confidence 3332 234578999999887776543 457899999987533221111 122345677875 355556666778
Q ss_pred cEEEEecCCCCCC
Q 019847 304 TIRFWEAFGPSGD 316 (335)
Q Consensus 304 ~v~iw~~~~~~~~ 316 (335)
.|..++..+++..
T Consensus 230 ~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 230 AIFSANRLTGSDV 242 (316)
T ss_dssp EEEEEETTTCCCC
T ss_pred eEEEEeCCCCcce
Confidence 8888887655443
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=2.8e-06 Score=69.25 Aligned_cols=239 Identities=8% Similarity=0.008 Sum_probs=136.8
Q ss_pred ceeeeecCC-c-eEEEecCCeEEEEEecCCceeeEEeecC-----------------CCCCceEEEEcCCCCEEEEEECC
Q 019847 19 SKVIDWGRN-N-VLAVALGPVLFLWKWENGKVKKLLQVPG-----------------EDDYPTSVSWSHDAKTLAVGYMD 79 (335)
Q Consensus 19 ~~~~~~~~~-~-~~~~~~~~~i~vw~~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~~~~d 79 (335)
...++|+++ . +++...++.|..|+..+++......... ....+..+++.++...|+++...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 455778763 4 6666678899999987766433221100 01347899999833345556555
Q ss_pred CcEEEEeCCCceeEeeec---c-cccceeEeeecCCCCCEEEEeeC-----------------CCcEEEEecccCCeeeE
Q 019847 80 SKLQLWDAETSKLVRNLE---G-HHRRVATSSWNHWNGHILTSGSK-----------------DKSIINHDVRVSNNVTS 138 (335)
Q Consensus 80 g~i~iw~~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~ 138 (335)
+.|..+|..+++...... + .......+++.+.++++.++-.. ++.|..+|..++.. ..
T Consensus 101 ~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~-~~ 179 (322)
T 2fp8_A 101 YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET-TL 179 (322)
T ss_dssp TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE-EE
T ss_pred CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE-EE
Confidence 568889877654322111 1 11246678887634555555322 36788888754432 21
Q ss_pred EeecCCCCEEEEEeecCCCEEEEE-eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC-------
Q 019847 139 CIKAHSGEVCGLKWSNEGNLLASG-GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG------- 210 (335)
Q Consensus 139 ~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g------- 210 (335)
... .......++++|+++.|..+ ...+.|..|++...... ....+....+ ...+++.++|. ++++..+
T Consensus 180 ~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-~~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 180 LLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-TAEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMH 255 (322)
T ss_dssp EEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT-CEEEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTT
T ss_pred ecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC-ccceEEeCCC-CCCeEECCCCC-EEEEecCccccccc
Confidence 111 12334678999999866655 45689999998743211 1111111223 77899999996 5444321
Q ss_pred -CCCCeEEEEECCCCceEEEeecC-----CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCC
Q 019847 211 -REDGCIKIWNVQKGTCIHGIDAK-----AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 211 -~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
...+.|..+|. .++.+..+... ..+..+++ .++...++. ..++.|..+++..
T Consensus 256 ~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~------~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 256 GRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGT------LFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEEC------SSCSEEEEEEC--
T ss_pred CCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEee------cCCCceEEEeccc
Confidence 01467888886 47777666543 23555555 344433332 4577888888653
No 271
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.98 E-value=1.6e-06 Score=66.33 Aligned_cols=191 Identities=12% Similarity=0.107 Sum_probs=121.7
Q ss_pred eeEeeeccccc--ceeEeeecCCCCCEEEEeeCCC--cEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCC
Q 019847 91 KLVRNLEGHHR--RVATSSWNHWNGHILTSGSKDK--SIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 91 ~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
+.+.++ .|.. -...+.|++ +.++.+.+.+| .|+.+|+.+++............--.++.. .+++....-.++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCC
Confidence 445555 3543 355788874 56666666654 899999998776444322222112334443 234445555789
Q ss_pred eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC------CcEeEEE
Q 019847 167 VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK------AQICGLE 240 (335)
Q Consensus 167 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~------~~~~~~~ 240 (335)
.+.+||.++.+ .+.++.... .-..++ +++..++++-+ ++.|.++|..+.+.+..++.. ..++.+.
T Consensus 86 ~v~v~D~~tl~---~~~ti~~~~-~Gwglt--~dg~~L~vSdg---s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 86 EGFVYDLATLT---PRARFRYPG-EGWALT--SDDSHLYMSDG---TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp EEEEEETTTTE---EEEEEECSS-CCCEEE--ECSSCEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EEEEEECCcCc---EEEEEeCCC-CceEEe--eCCCEEEEECC---CCeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 99999977643 444444322 223444 56777888763 788999999999998888653 2455666
Q ss_pred eCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC-------------CCceeEeEEcCCCCEEEEEeC
Q 019847 241 WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS-------------NSRILDLSQSPDGLTVATAGA 301 (335)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~l~~~~~ 301 (335)
+. +|+..+.. ..+..|.+.|..+++.+..+... ..-.+.|+++|+++.|+..+.
T Consensus 157 ~~-~G~lyanv------w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 157 WV-NGELLANV------WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EE-TTEEEEEE------TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred Ee-CCEEEEEE------CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 65 55433322 45789999999999987765411 124689999998766666654
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.98 E-value=2.9e-06 Score=68.83 Aligned_cols=234 Identities=16% Similarity=0.091 Sum_probs=144.4
Q ss_pred EEEEEECCCcEEEEeCCCce-eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEE
Q 019847 72 TLAVGYMDSKLQLWDAETSK-LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGL 150 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~ 150 (335)
+|+.+. ...|+..++.... ..............++|.+.++.++++-...+.|..+++...................+
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 444443 4579999988653 11112222345778999985566777767788999999875532222222233456678
Q ss_pred EeecC-CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEE
Q 019847 151 KWSNE-GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHG 229 (335)
Q Consensus 151 ~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~ 229 (335)
++.+. ++++++-...+.|.++++.... ...+ ..........+++.|.+..++.+..+ ..+.|...++........
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l--~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~ 160 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVL--FWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFII 160 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--ECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEE
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCc-EEEE--EeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEE
Confidence 88874 4455555567889999976422 1111 12334557899999977677776521 357899998764332222
Q ss_pred ee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEE
Q 019847 230 ID-AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFW 308 (335)
Q Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw 308 (335)
.. .-.....++++|++..++... ...+.|..+|+..................+++..+ .++.+-...+.|..+
T Consensus 161 ~~~~l~~Pnglavd~~~~~lY~aD-----~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~-~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 161 INSEIYWPNGLTLDYEEQKLYWAD-----AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILAC 234 (318)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT-EEEEEETTTTEEEEE
T ss_pred EECCCCCccEEEEeccCCEEEEEE-----CCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC-EEEEEecCCCeEEEE
Confidence 22 224578999999877776543 56789999998754332222323344667777543 455555567888888
Q ss_pred ecCCCCCC
Q 019847 309 EAFGPSGD 316 (335)
Q Consensus 309 ~~~~~~~~ 316 (335)
+..+++..
T Consensus 235 ~~~~G~~~ 242 (318)
T 3sov_A 235 NKYTGEGL 242 (318)
T ss_dssp ETTTCCSC
T ss_pred ECCCCCce
Confidence 88665543
No 273
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.97 E-value=1.5e-05 Score=70.82 Aligned_cols=232 Identities=8% Similarity=-0.070 Sum_probs=148.8
Q ss_pred CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCceeEeeecccccceeE
Q 019847 27 NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKLVRNLEGHHRRVAT 105 (335)
Q Consensus 27 ~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~v~~ 105 (335)
..++..+..+.|+..++++.+......+.+ -..+..++|++.+..|..+. .++.|..+++........+.........
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~-~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTG-VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCC-CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 445666788899999998766544433333 34578999999776666554 5788999998755433333333345677
Q ss_pred eeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC--CCeEEEEEccCCCccccee
Q 019847 106 SSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD--DNVVRIWERSKMSSSKSLH 183 (335)
Q Consensus 106 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~ 183 (335)
+++.+..+++.++-...+.|.+.++..... .......-.....+++.|....|..... .+.|...++.... ...+
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l- 161 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTL- 161 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEE-
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEE-
Confidence 888764566777767778999999874432 2222234456789999996556665553 4678888776432 1222
Q ss_pred eccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeE
Q 019847 184 RFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKL 263 (335)
Q Consensus 184 ~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 263 (335)
...-.....+++++++..|+.+-. ..+.|..+|+.................+++.. + .++.. -...+.|
T Consensus 162 --~~~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~-~ly~t-----D~~~~~I 230 (628)
T 4a0p_A 162 --VPNVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D-YIYWT-----DWSRRSI 230 (628)
T ss_dssp --ECSCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T-EEEEE-----ETTTTEE
T ss_pred --ECCCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C-EEEEe-----cCCCCEE
Confidence 223456789999998888888876 78899999987644322122233455677654 2 33222 2456778
Q ss_pred EEEECCCCce
Q 019847 264 CLWKYPNMTK 273 (335)
Q Consensus 264 ~i~d~~~~~~ 273 (335)
...|..+++.
T Consensus 231 ~~~dk~tg~~ 240 (628)
T 4a0p_A 231 ERANKTSGQN 240 (628)
T ss_dssp EEEETTTCCS
T ss_pred EEEECCCCCc
Confidence 8888655543
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.93 E-value=1.2e-05 Score=67.57 Aligned_cols=234 Identities=11% Similarity=0.011 Sum_probs=147.1
Q ss_pred EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC---eeeEEeecCCCCEE
Q 019847 72 TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN---NVTSCIKAHSGEVC 148 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~i~ 148 (335)
+|+.+. ...|+..++........+. ....+..++|.+.++.++++-...+.|+.+++.... ..............
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 555554 4689999988765444443 456788999998556666666677889999886421 12233333445678
Q ss_pred EEEeec-CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 149 GLKWSN-EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 149 ~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
.+++.+ .++++++-...+.|.+.+++.... ...+...-.....++++|.+..++.+..+ ..+.|...++......
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~---~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR---KTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIY 238 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSE---EEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCSCE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCce---EEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCccE
Confidence 899998 455555555678899998764321 11122233457899999987777777531 3478999998754433
Q ss_pred EEeec-CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC--CCCceeEeEEcCCCCEEEEEeCCCc
Q 019847 228 HGIDA-KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS--SNSRILDLSQSPDGLTVATAGADET 304 (335)
Q Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 304 (335)
..+.. -.....+++++++..|+... ...+.|..+|+........... .......+++. .+.++.+-...+.
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD-----~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~ 312 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 312 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEE-----CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe
Confidence 33332 25678999999888776553 5578999999865443222221 22345577773 3445556666788
Q ss_pred EEEEecCCCCCCC
Q 019847 305 IRFWEAFGPSGDE 317 (335)
Q Consensus 305 v~iw~~~~~~~~~ 317 (335)
|..++..+++...
T Consensus 313 V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 313 IFSANRLTGSDVN 325 (400)
T ss_dssp EEEEESSSCCCCE
T ss_pred EEEEEcCCCCceE
Confidence 8888866655443
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.93 E-value=1.4e-05 Score=72.67 Aligned_cols=239 Identities=6% Similarity=-0.062 Sum_probs=147.9
Q ss_pred eecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEE-ECCCcEEEEeCCCc----eeEeeec
Q 019847 23 DWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVG-YMDSKLQLWDAETS----KLVRNLE 97 (335)
Q Consensus 23 ~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~----~~~~~~~ 97 (335)
+.....++..+....|+..++...+...+. .....+..++|.+....|+.. ...+.|+.+++... .....+.
T Consensus 391 ~~~~~p~Ll~an~~~Ir~i~l~~~~~~~l~---~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 391 AVGSIAYLFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp ETTSCCEEEEECBSSEEEECTTSCCCEEEE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred ecccccccccccccceeEeeccCCcceeee---cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 333444566666778888888776654333 234567899999866655554 45678998988753 2223333
Q ss_pred ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC-C-CeEEEEEccC
Q 019847 98 GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD-D-NVVRIWERSK 175 (335)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~ 175 (335)
........|++.+..++++++-...+.|.+.++.... ..............|++.|.+..|+.+.. . +.|...++..
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS-EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe-EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 3345667788887455677777778899999987443 23333344556899999997666666553 2 6788888764
Q ss_pred CCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC---CcEeEEEeCCCCceeeeee
Q 019847 176 MSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK---AQICGLEWNRHHKEILSGH 252 (335)
Q Consensus 176 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 252 (335)
... .......-.....|++++.+..|+.+-. ..+.|..+++........+... .....+++.. ..|+..
T Consensus 547 ~~~---~~lv~~~l~~P~GLavD~~~~~LYwaD~--~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~--~~lYwt- 618 (791)
T 3m0c_C 547 VDI---YSLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWT- 618 (791)
T ss_dssp CCE---EEEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET--TEEEEE-
T ss_pred Cce---EEEEeCCCCCceEEEEecCCCeEEEEeC--CCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC--CEEEEE-
Confidence 221 1112223356789999988888888865 6789999998755444333321 2344565533 334332
Q ss_pred eeeeecCCCeEEEEECCCCceeecc
Q 019847 253 GFSASGDGNKLCLWKYPNMTKVGEL 277 (335)
Q Consensus 253 ~~~~~~~~~~i~i~d~~~~~~~~~~ 277 (335)
-...+.|...+..+++.+..+
T Consensus 619 ----D~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 619 ----DIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp ----ETTTTEEEEEETTTCCCCEEE
T ss_pred ----ECCCCEEEEEeCCCCcceEEe
Confidence 245677888876666544433
No 276
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.93 E-value=1.8e-06 Score=78.64 Aligned_cols=197 Identities=9% Similarity=0.023 Sum_probs=112.9
Q ss_pred CceEEEEc-CCCCEEEEEEC-CC----cEEEEeCCCc-eeEeeecccccceeEeeecCCCCCEEEEeeCC-----CcEEE
Q 019847 60 YPTSVSWS-HDAKTLAVGYM-DS----KLQLWDAETS-KLVRNLEGHHRRVATSSWNHWNGHILTSGSKD-----KSIIN 127 (335)
Q Consensus 60 ~v~~~~~~-~~~~~l~~~~~-dg----~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~ 127 (335)
.+...+|| |||++||.+.. +| .|+++|+.++ +.+... -......+.|+| +++.|+....+ ..|+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~Wsp-Dg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGP-DHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECS-STTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEec-CCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99999987653 23 4999999998 633210 112345789999 77766666554 35778
Q ss_pred EecccCCee-eEEee-cCCCCEEEEEeecCCCEEEEEeC---CCeEEEEEccCCCcccc-eeec-cCCCCCeeEEEecCC
Q 019847 128 HDVRVSNNV-TSCIK-AHSGEVCGLKWSNEGNLLASGGD---DNVVRIWERSKMSSSKS-LHRF-TDHCGGVKALAWSPH 200 (335)
Q Consensus 128 ~d~~~~~~~-~~~~~-~~~~~i~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~-~~~~-~~~~~~v~~~~~~~~ 200 (335)
+++.++... ...+. ........+.|+|||++|+..+. ...|+++|+..+.. .. +..+ .........+.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~~~~~l~~~~~~~~~s~~~~~- 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HNTLEIVRPREKGVRYDVQMHG- 329 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-CCCEEESSCCCTTCCEEEEEET-
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-CceeEEeecCCCCceEEEeeee-
Confidence 888654321 12222 23345678899999999887663 34688888876421 11 0222 22344555666554
Q ss_pred CCcEEEEecC--CCCCeEEEEECCCC-ceEE-EeecCC--cEeEEEeCCCCceeeeeeeeeeecCCC--eEEEEEC
Q 019847 201 QVNVLATGGG--REDGCIKIWNVQKG-TCIH-GIDAKA--QICGLEWNRHHKEILSGHGFSASGDGN--KLCLWKY 268 (335)
Q Consensus 201 ~~~~~~~~~g--~~d~~i~i~d~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~i~d~ 268 (335)
+..++..... .....|..+|+.++ +... .+.... .+..+.+. +..++... ..++ .+.++++
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~-----~~~g~~~l~~~dl 398 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAG-----RRAGLTRIWTMMA 398 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEE-----EETTEEEEEEEEC
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEE-----EeCCEEEEEEEec
Confidence 4455555431 12347778887653 2222 233332 34455554 44444321 3355 4566675
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.93 E-value=3.7e-07 Score=81.99 Aligned_cols=262 Identities=12% Similarity=0.022 Sum_probs=143.9
Q ss_pred eEEEEEecCCceeeEEeecC-CCCCceEEEEcCCCCEEEEEEC-CCcEEEEeCCCceeEeeecccc-cceeEeeecCCCC
Q 019847 37 VLFLWKWENGKVKKLLQVPG-EDDYPTSVSWSHDAKTLAVGYM-DSKLQLWDAETSKLVRNLEGHH-RRVATSSWNHWNG 113 (335)
Q Consensus 37 ~i~vw~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 113 (335)
.+.+||..+++......++. +.....++++.++++.+++|+. +..+.+||..+.+....-.... ..-.++...+ ++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg 298 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS-DG 298 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT-TS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEec-CC
Confidence 68899999888765544432 3333456788899999999984 5589999998775443322111 1223344555 78
Q ss_pred CEEEEee-CC-----CcEEEEecccCCeeeEEe---ecCCCCEEEEEeecCCCEEEEEeCCC---------eEEEEEccC
Q 019847 114 HILTSGS-KD-----KSIINHDVRVSNNVTSCI---KAHSGEVCGLKWSNEGNLLASGGDDN---------VVRIWERSK 175 (335)
Q Consensus 114 ~~l~~~~-~d-----g~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg---------~i~iwd~~~ 175 (335)
++++.|+ .+ ..+.+||..+........ ......-....+..+++.++.++.+| .+..||...
T Consensus 299 ~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~ 378 (656)
T 1k3i_A 299 RVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSG 378 (656)
T ss_dssp CEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECST
T ss_pred eEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCC
Confidence 8999988 44 468999987654211100 00000000011223555556665444 567788765
Q ss_pred CCcccceeeccC------CCCCeeEEEecCCCCcEEEEecCCCCC-----------eEEEEECCCCceEEEe--ec--CC
Q 019847 176 MSSSKSLHRFTD------HCGGVKALAWSPHQVNVLATGGGREDG-----------CIKIWNVQKGTCIHGI--DA--KA 234 (335)
Q Consensus 176 ~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~~~~g~~d~-----------~i~i~d~~~~~~~~~~--~~--~~ 234 (335)
............ ....-.++.+...+..+++.|+ .++ .+.+||..+.+-.... .. ..
T Consensus 379 ~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG--~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R 456 (656)
T 1k3i_A 379 SGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGG--SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR 456 (656)
T ss_dssp TCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECC--BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC
T ss_pred cceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeC--CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc
Confidence 432221111110 0112244555444456787775 321 6888888876654432 11 22
Q ss_pred cEeEEEeCCCCceeeeeeeeee-----ecCCCeEEEEECCCCcee--ecccCCCCceeEeEEcCCCCEEEEEeC
Q 019847 235 QICGLEWNRHHKEILSGHGFSA-----SGDGNKLCLWKYPNMTKV--GELQSSNSRILDLSQSPDGLTVATAGA 301 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~ 301 (335)
.-.++...|+++.++.|..-.. ...-..+.+||..+.+-. ..+...........+.|++++++.|+.
T Consensus 457 ~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 457 TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 2345566788988887731000 011256899998765432 222222222234556799999999985
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=8e-06 Score=74.99 Aligned_cols=275 Identities=10% Similarity=0.016 Sum_probs=168.2
Q ss_pred ccceeeeecC-CceEEEecCCeEEEEEecCCceeeEEe-------e-----cCCCCCceEEEEcCCCCEEEEEECCCcEE
Q 019847 17 YYSKVIDWGR-NNVLAVALGPVLFLWKWENGKVKKLLQ-------V-----PGEDDYPTSVSWSHDAKTLAVGYMDSKLQ 83 (335)
Q Consensus 17 ~~~~~~~~~~-~~~~~~~~~~~i~vw~~~~~~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 83 (335)
..+.++...+ +.+.+++..+.|.+++..+++...... . .-....|.++...++|. |-.|+.++-|.
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~ 336 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGIN 336 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEE
Confidence 4566777655 466666665789999988766433221 1 01245789999988886 66677677799
Q ss_pred EEeCCCceeEeeec---------ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEe---ecCCCCEEEEE
Q 019847 84 LWDAETSKLVRNLE---------GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCI---KAHSGEVCGLK 151 (335)
Q Consensus 84 iw~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~~i~~~~ 151 (335)
.++..+........ .....|.++...+ ++. |..|+.++-+..||..+... .... ......|.++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 337 FISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGK-LWIGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSC-EEEEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEE
T ss_pred EeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCC-EEEEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEE
Confidence 99887654322110 1234688888765 444 55677667788888764321 1110 12346788998
Q ss_pred eecCCCEEEEEeCCCeEEEEEccCCCcccceeecc---CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEE
Q 019847 152 WSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFT---DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIH 228 (335)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~ 228 (335)
..+++++. .|+.++-+..+|.++.. +..+. .....|.++...+++. +.+.. . +-+..+|..+++...
T Consensus 414 ~d~~g~lW-igt~~~Gl~~~~~~~~~----~~~~~~~~~~~~~v~~i~~d~~g~-lwigt---~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 414 KDSEGNLW-FGTYLGNISYYNTRLKK----FQIIELEKNELLDVRVFYEDKNKK-IWIGT---H-AGVFVIDLASKKVIH 483 (781)
T ss_dssp ECTTSCEE-EEETTEEEEEECSSSCE----EEECCSTTTCCCCEEEEEECTTSE-EEEEE---T-TEEEEEESSSSSCCE
T ss_pred ECCCCCEE-EEeccCCEEEEcCCCCc----EEEeccCCCCCCeEEEEEECCCCC-EEEEE---C-CceEEEeCCCCeEEe
Confidence 88777644 46766778889865421 22221 2346789998888875 44332 3 568999988765543
Q ss_pred Eeec------CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeeccc---CCCCceeEeEEcCCCCEEEEE
Q 019847 229 GIDA------KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQ---SSNSRILDLSQSPDGLTVATA 299 (335)
Q Consensus 229 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~ 299 (335)
.... ...+.++...++|...+.. .++.+..||..+.+...-.. -....|.++...++|.+.++.
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt-------~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWIGT-------FGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEEEE-------SSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred cccCcccccccceeEEEEEcCCCCEEEEE-------cCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 3222 2468889999988866543 23557778876654322111 123468899999998766544
Q ss_pred eCCCcEEEEecCCC
Q 019847 300 GADETIRFWEAFGP 313 (335)
Q Consensus 300 ~~dg~v~iw~~~~~ 313 (335)
.+|.+..||....
T Consensus 557 -~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 557 -GEGLVCFPSARNF 569 (781)
T ss_dssp -TTEEEEESCTTTC
T ss_pred -CCCceEEECCCCC
Confidence 4666577776654
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=3e-06 Score=71.84 Aligned_cols=152 Identities=12% Similarity=0.134 Sum_probs=96.1
Q ss_pred cceeeeecC---CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC-CC----cEEEEeCCC
Q 019847 18 YSKVIDWGR---NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM-DS----KLQLWDAET 89 (335)
Q Consensus 18 ~~~~~~~~~---~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~i~iw~~~~ 89 (335)
....+++++ +.++++...+.|+.+|.++++...... .......++|++++++|+++.. ++ .+.+++. .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~ 213 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-E 213 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-G
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-C
Confidence 345677774 456666555889999988776544332 3456889999999996766654 22 2333443 2
Q ss_pred ceeE--eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee-cCCCCEEEEEeecCCCEEEEE-eCC
Q 019847 90 SKLV--RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK-AHSGEVCGLKWSNEGNLLASG-GDD 165 (335)
Q Consensus 90 ~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~-~~d 165 (335)
+... ..+. .......+++.|.++.++++-..++.|..++...... ..... ........++|+|++++|..+ ...
T Consensus 214 g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 214 SGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp GTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEECSSSSCCEEEEECTTSSEEEEEETTT
T ss_pred Cceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEcCCCCcceeEEEcCCCCEEEEEECCC
Confidence 3221 2222 2234677888885667777766788999999874432 12211 122346789999999955444 567
Q ss_pred CeEEEEEccC
Q 019847 166 NVVRIWERSK 175 (335)
Q Consensus 166 g~i~iwd~~~ 175 (335)
+.|..++...
T Consensus 292 ~~I~~~~~d~ 301 (430)
T 3tc9_A 292 HYILRSDYDW 301 (430)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEeCCc
Confidence 8899988663
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=4.1e-06 Score=71.05 Aligned_cols=238 Identities=9% Similarity=-0.000 Sum_probs=138.2
Q ss_pred CceEEEEcC-CCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeC-CC----cEEEEecccC
Q 019847 60 YPTSVSWSH-DAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSK-DK----SIINHDVRVS 133 (335)
Q Consensus 60 ~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg----~i~~~d~~~~ 133 (335)
....++++| ++..|.++...+.|+.+|+++++...... .......++|++ +++.|+.+.. ++ .+..++....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 467899998 46667766655889999998766544333 456688999999 8885555543 22 3444443322
Q ss_pred CeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCC
Q 019847 134 NNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRE 212 (335)
Q Consensus 134 ~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~ 212 (335)
......+.. ......++++| ++.++++-..++.|..++...... ..+.... .......++|+|++.+++++.. .
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~~-~~~~P~gia~~pdG~~lyv~d~--~ 290 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTIQ-DSGWEFHIQFHPSGNYAYIVVV--N 290 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEECS-SSSCCEEEEECTTSSEEEEEET--T
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEcC-CCCcceeEEEcCCCCEEEEEEC--C
Confidence 211122222 23456788999 677666666778999999764321 1122221 2234678999999987777765 7
Q ss_pred CCeEEEEECCC--Cce--EEEeecC----------------CcEe-EEEeC--------CCCceeeeeeeeeeecCCCeE
Q 019847 213 DGCIKIWNVQK--GTC--IHGIDAK----------------AQIC-GLEWN--------RHHKEILSGHGFSASGDGNKL 263 (335)
Q Consensus 213 d~~i~i~d~~~--~~~--~~~~~~~----------------~~~~-~~~~~--------~~~~~~~~~~~~~~~~~~~~i 263 (335)
.+.|..++... ++. ...+... .... .+... +++...++ -...+.|
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva------D~~n~~I 364 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC------DRENHCI 364 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE------EGGGTEE
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE------ECCCcEE
Confidence 88999987653 221 1122110 0111 23332 22333222 2446778
Q ss_pred EEEECCCCceeeccc-------C----------CCCceeEeEEcCC-CCEEEEEeCCCcEEEEecC
Q 019847 264 CLWKYPNMTKVGELQ-------S----------SNSRILDLSQSPD-GLTVATAGADETIRFWEAF 311 (335)
Q Consensus 264 ~i~d~~~~~~~~~~~-------~----------~~~~i~~~~~~~~-~~~l~~~~~dg~v~iw~~~ 311 (335)
+.++ .+++...... + .-.....++++|+ +.++++-..+..|+.++++
T Consensus 365 ~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 365 RILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 8887 3443322111 0 0124688999994 6666665667788887764
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.90 E-value=3.4e-06 Score=71.53 Aligned_cols=239 Identities=7% Similarity=-0.025 Sum_probs=141.8
Q ss_pred CCceEEEEcCC--CCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCC---C-cEEEEeccc
Q 019847 59 DYPTSVSWSHD--AKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKD---K-SIINHDVRV 132 (335)
Q Consensus 59 ~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g-~i~~~d~~~ 132 (335)
.....++|+|+ +..|..+...+.|+.+|..+++...... .......+++++ +++++++.... . .+...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCC
Confidence 34679999984 4556666544899999998777654433 445688999999 77755544321 1 233333332
Q ss_pred CCeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCC
Q 019847 133 SNNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGR 211 (335)
Q Consensus 133 ~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~ 211 (335)
.......+. .......++++| ++.++++-..++.|+.+|...+.....+.... ....-..++|+|++..++++..
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~-~~~~~~~ia~dpdG~~LYvad~-- 292 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMD-TKGSNFHIVWHPTGDWAYIIYN-- 292 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECS-CCSSCEEEEECTTSSEEEEEET--
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccC-CCCCcccEEEeCCCCEEEEEeC--
Confidence 221111121 233456688899 67666666667889999976432211222111 1222346999999987777765
Q ss_pred CCCeEEEEECC--CCce--EEEeec----------------CCcEeEEEe---------CCCCceeeeeeeeeeecCCCe
Q 019847 212 EDGCIKIWNVQ--KGTC--IHGIDA----------------KAQICGLEW---------NRHHKEILSGHGFSASGDGNK 262 (335)
Q Consensus 212 ~d~~i~i~d~~--~~~~--~~~~~~----------------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 262 (335)
..+.|+.++.. ++.. ...+.. -.....+++ .+++...++- ...+.
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD------~~n~~ 366 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCD------RDSHT 366 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEE------TTTTE
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEE------CCCCE
Confidence 67899998865 2321 111111 013556787 5666554443 55788
Q ss_pred EEEEECCCCceeecccCC------------------CCceeEeEEc-CCCCEEEEEeCCCcEEEEecC
Q 019847 263 LCLWKYPNMTKVGELQSS------------------NSRILDLSQS-PDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 263 i~i~d~~~~~~~~~~~~~------------------~~~i~~~~~~-~~~~~l~~~~~dg~v~iw~~~ 311 (335)
|+.++. ++... ++.+. -.....|+++ +++.++++=..++.|+.++++
T Consensus 367 I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 367 VRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 888884 44332 22111 1236789999 677766666677888888764
No 282
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.89 E-value=1.2e-05 Score=63.67 Aligned_cols=279 Identities=9% Similarity=0.084 Sum_probs=179.1
Q ss_pred cccceeeeecCCceEEEec----CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 16 DYYSKVIDWGRNNVLAVAL----GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~----~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
.+....+.+..++++++-. +..|.|.|+..+.........+ -+.-.+|..+.+|.-. ...+.++|+++.+
T Consensus 25 ~i~f~~lTmESDkyicVrE~~~~~~~VvIiDl~n~~~~~Rrpi~A-----dsAIMnP~~~ViALra-g~~LQiFnletK~ 98 (365)
T 2xzh_A 25 NIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKS 98 (365)
T ss_dssp GCSTTTEEEEETTEEEEEEEETTEEEEEEEETTSTTSCEEEECCC-----SEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred ccccceeeeecCceEEEEecCCCCCEEEEEECCCCCCcccccccc-----ceeeeCCCccEEEEec-CCeEEEechHHhh
Confidence 3344445556677777643 2378889988766543333322 2455799998888776 6789999999999
Q ss_pred eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCC----CCEEEEEeecCCCEEEEEeC---
Q 019847 92 LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHS----GEVCGLKWSNEGNLLASGGD--- 164 (335)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~--- 164 (335)
.++.+.- ...|.--.|.. .+.|+-.+ +..|+.|++.....+.+.+..|. ..|.....+++.++++..+-
T Consensus 99 klks~~~-~e~VvfWkWis--~~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~ 174 (365)
T 2xzh_A 99 KMKAHTM-TDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 174 (365)
T ss_dssp EEEEEEC-SSCEEEEEECS--SSEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEE
T ss_pred hhcceec-CCccEEEEecC--CCeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEecc
Confidence 8888774 46788888874 45554444 46899999986656666665553 46777788888888776542
Q ss_pred ----CCeEEEEEccCCCcccceeeccCCCCCeeEEEec--CCCCcEEEEec-CCCCCeEEEEECCCC---ce-----EEE
Q 019847 165 ----DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWS--PHQVNVLATGG-GREDGCIKIWNVQKG---TC-----IHG 229 (335)
Q Consensus 165 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~-g~~d~~i~i~d~~~~---~~-----~~~ 229 (335)
.|.+.+|..+. +.-+.+++|......+... +....+++.+. +...+++++.++... .. ...
T Consensus 175 ~~~v~G~mQLYS~er----~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vd 250 (365)
T 2xzh_A 175 QNRVVGAMQLYSVDR----KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVD 250 (365)
T ss_dssp TTEEEEEEEEEETTT----TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEE
T ss_pred CCccceeEEEEeecc----cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccce
Confidence 36788998764 3455666775544333332 12223444442 012268889888432 11 111
Q ss_pred e--ec---CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCc
Q 019847 230 I--DA---KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADET 304 (335)
Q Consensus 230 ~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 304 (335)
+ +. ..-..++..++....+..- +.-|.+++||+.++.++..-+-....|..-+-+....=++.....|.
T Consensus 251 i~fppea~~DFPVamqvs~kygviyvi------TK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~Gq 324 (365)
T 2xzh_A 251 VFFPPEAQNDFPVAMQISEKHDVVFLI------TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQ 324 (365)
T ss_dssp ECCCTTCTTCCEEEEEEETTTTEEEEE------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCE
T ss_pred eeCCccccCCceEEEEecccCCEEEEE------eCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCE
Confidence 1 11 1235567777776666554 66899999999999999887766677765555544444666668888
Q ss_pred EEEEecCCCC
Q 019847 305 IRFWEAFGPS 314 (335)
Q Consensus 305 v~iw~~~~~~ 314 (335)
|.--.++..+
T Consensus 325 Vl~v~v~~~~ 334 (365)
T 2xzh_A 325 VLSVCVEEEN 334 (365)
T ss_dssp EEEEEECTTT
T ss_pred EEEEEECccc
Confidence 8777666544
No 283
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.87 E-value=8.2e-06 Score=65.90 Aligned_cols=222 Identities=8% Similarity=0.014 Sum_probs=129.9
Q ss_pred cceeeeecCC-ceEEEe-cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCC--cEEEEeCCCceeE
Q 019847 18 YSKVIDWGRN-NVLAVA-LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDS--KLQLWDAETSKLV 93 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iw~~~~~~~~ 93 (335)
....++|+++ .++++. .++.|..||.+.. ....... ...+..+++.++|+++++..... .|..++..+++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~---~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV---EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC---SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC---CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE
Confidence 4556888764 566655 6789999987653 3333333 24588999999999666554332 4777777777654
Q ss_pred eeecc-cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC-eeeEE--------eecCCCCEEEEEeecCCCEEEEE-
Q 019847 94 RNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN-NVTSC--------IKAHSGEVCGLKWSNEGNLLASG- 162 (335)
Q Consensus 94 ~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-~~~~~--------~~~~~~~i~~~~~~~~~~~l~~~- 162 (335)
..... .......++..+ ++..+++-..++.|..+|..... .+... ....-.....+ +|+++.|..+
T Consensus 109 ~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 32221 112223344334 44455555568889888876432 11100 00111234556 7887766555
Q ss_pred eCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEE--EeecC-CcEeEE
Q 019847 163 GDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIH--GIDAK-AQICGL 239 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~--~~~~~-~~~~~~ 239 (335)
...+.|..+++...........+.. ......++++++|. ++++.. ..+.|.++|.. ++... .+... ....++
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~-l~va~~--~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~ 260 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN-LYGATH--IYNSVVRIAPD-RSTTIIAQAEQGVIGSTAV 260 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC-EEEECB--TTCCEEEECTT-CCEEEEECGGGTCTTEEEE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC-EEEEeC--CCCeEEEECCC-CCEEEEeecccccCCceEE
Confidence 4567899999874111111111111 13456789999995 566544 57889999975 65532 33333 568889
Q ss_pred EeC---CCCceeeee
Q 019847 240 EWN---RHHKEILSG 251 (335)
Q Consensus 240 ~~~---~~~~~~~~~ 251 (335)
+|. |++..|++.
T Consensus 261 a~~g~~~d~~~LyVt 275 (306)
T 2p4o_A 261 AFGQTEGDCTAIYVV 275 (306)
T ss_dssp EECCSTTTTTEEEEE
T ss_pred EEecccCCCCEEEEE
Confidence 998 787777654
No 284
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.86 E-value=9e-06 Score=68.94 Aligned_cols=199 Identities=10% Similarity=0.053 Sum_probs=115.3
Q ss_pred ceeeeecC----CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCC-----cEEEEeCCC
Q 019847 19 SKVIDWGR----NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDS-----KLQLWDAET 89 (335)
Q Consensus 19 ~~~~~~~~----~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~ 89 (335)
...++|++ +.++++...+.|+.++..+++..... .....+..++++++|+ |+++...+ .+...+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~---~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT---TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC---CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee---cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 45688885 45666655588999998888764432 2345689999999999 54444321 133333221
Q ss_pred cee-EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee-cCCCCEEEEEeecCCCEEEEE-eCCC
Q 019847 90 SKL-VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK-AHSGEVCGLKWSNEGNLLASG-GDDN 166 (335)
Q Consensus 90 ~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~-~~dg 166 (335)
+.. ...+. .......+++.|.++.++++-..++.|+.+|..++........ +....-..++|+|+++.|..+ ...+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 111 01111 2244567888885666666666778899999875543122222 122233579999999855554 4567
Q ss_pred eEEEEEccCCCc-ccceeeccC---------------CCCCeeEEEe---------cCCCCcEEEEecCCCCCeEEEEEC
Q 019847 167 VVRIWERSKMSS-SKSLHRFTD---------------HCGGVKALAW---------SPHQVNVLATGGGREDGCIKIWNV 221 (335)
Q Consensus 167 ~i~iwd~~~~~~-~~~~~~~~~---------------~~~~v~~~~~---------~~~~~~~~~~~~g~~d~~i~i~d~ 221 (335)
.|+.++...... ......+.+ .-.....+++ .+++ .++++-. ..+.|+.++.
T Consensus 296 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~--~n~~I~~~~~ 372 (433)
T 4hw6_A 296 CIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDR--DSHTVRVLTP 372 (433)
T ss_dssp EEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEET--TTTEEEEECT
T ss_pred EEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEEC--CCCEEEEECC
Confidence 899988653111 000011111 1123567888 5655 5666654 6788999985
Q ss_pred CCCce
Q 019847 222 QKGTC 226 (335)
Q Consensus 222 ~~~~~ 226 (335)
++..
T Consensus 373 -~G~v 376 (433)
T 4hw6_A 373 -EGRV 376 (433)
T ss_dssp -TSEE
T ss_pred -CCCE
Confidence 5543
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.85 E-value=1.5e-07 Score=84.81 Aligned_cols=248 Identities=7% Similarity=-0.065 Sum_probs=146.5
Q ss_pred CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCC----ceeEeeeccccc
Q 019847 27 NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAET----SKLVRNLEGHHR 101 (335)
Q Consensus 27 ~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~----~~~~~~~~~~~~ 101 (335)
..++..+..+.|+..++++.+...... ....+..++|.+.+..|+.+. ..+.|+.+++.. ......+.....
T Consensus 377 ~~~ll~~~~~~I~~id~~~~~~~~~~~---~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~ 453 (699)
T 1n7d_A 377 IAYLFFTNRHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 453 (699)
T ss_dssp CCCBCCCCTTC-CEECTTSCCEECCSC---CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC-
T ss_pred ceeEEecCccceEEEeCCCCcceeeec---cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCC
Confidence 334444556788888887766543322 234567899999777776654 467899999875 222222222223
Q ss_pred ceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC-C-CeEEEEEccCCCcc
Q 019847 102 RVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD-D-NVVRIWERSKMSSS 179 (335)
Q Consensus 102 ~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~iwd~~~~~~~ 179 (335)
....+++.+..++++++-...+.|.++++.... ..............+++.|.+.+|+.+.. . +.|..+++.... .
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~ 531 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-I 531 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-C
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-e
Confidence 456678875466666766677899999987433 22222222344578899996555555443 2 678887765321 1
Q ss_pred cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC---CcEeEEEeCCCCceeeeeeeeee
Q 019847 180 KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK---AQICGLEWNRHHKEILSGHGFSA 256 (335)
Q Consensus 180 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 256 (335)
..+ ....-.....|+|+|++..|+.+-. ..+.|..+++........+... .....+++..+ .++ .+
T Consensus 532 ~~l--~~~~l~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~ly-----wt 600 (699)
T 1n7d_A 532 YSL--VTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVF-----WT 600 (699)
T ss_dssp CEE--SCSSCSSCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEE-----EE
T ss_pred eEE--EeCCCCCccEEEEeccCCEEEEEec--CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEE-----EE
Confidence 111 1112234678999999888888876 6789999998743332222211 22344555433 232 22
Q ss_pred ecCCCeEEEEECCCCceeecccCCCCceeEeEEc
Q 019847 257 SGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQS 290 (335)
Q Consensus 257 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~ 290 (335)
....+.|..++..+++.+..+.........|++.
T Consensus 601 d~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 601 DIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp CSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred eCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 2557899999988888777765433334555543
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.82 E-value=9.4e-07 Score=80.57 Aligned_cols=243 Identities=13% Similarity=0.072 Sum_probs=131.9
Q ss_pred cceeeeec-CC-ceEEEec--CC----eEEEEEecCC-ceeeEEeecCCCCCceEEEEcCCCCEEEEEECC-----CcEE
Q 019847 18 YSKVIDWG-RN-NVLAVAL--GP----VLFLWKWENG-KVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD-----SKLQ 83 (335)
Q Consensus 18 ~~~~~~~~-~~-~~~~~~~--~~----~i~vw~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~ 83 (335)
......|+ ++ ..++.+. +| .|+++|+.++ +.... .+. .....++|+|||+.|+....+ ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 45678899 64 4555432 22 4999999988 63211 111 113468899999988887765 2688
Q ss_pred EEeCCCcee--Eeeec-ccccceeEeeecCCCCCEEEEeeC---CCcEEEEecccCC-ee--eEEeecCCCCEEEEEeec
Q 019847 84 LWDAETSKL--VRNLE-GHHRRVATSSWNHWNGHILTSGSK---DKSIINHDVRVSN-NV--TSCIKAHSGEVCGLKWSN 154 (335)
Q Consensus 84 iw~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~-~~--~~~~~~~~~~i~~~~~~~ 154 (335)
++++.+++. ...+. ........+.|+| +++.|+..+. ...|.++|+.++. .. ............++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee
Confidence 888877642 22222 2223456788999 8887776553 3468888887642 22 222333445556666554
Q ss_pred CCCEEEEEeCC----CeEEEEEccCCCcccceeeccCCCC--CeeEEEecCCCCcEEEEecCCCCCe--EEEEEC-----
Q 019847 155 EGNLLASGGDD----NVVRIWERSKMSSSKSLHRFTDHCG--GVKALAWSPHQVNVLATGGGREDGC--IKIWNV----- 221 (335)
Q Consensus 155 ~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~g~~d~~--i~i~d~----- 221 (335)
.+.+++....+ ..|..+|+..+...+.. +..+.. .+..+.+ .+..++++.. .++. |.++|+
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~~--~~~~lv~~~~--~~g~~~l~~~dl~~~~~ 403 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIAV--RSNYLVVAGR--RAGLTRIWTMMADSQDG 403 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEEE--CSSEEEEEEE--ETTEEEEEEEECCTTTS
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEEE--ECCEEEEEEE--eCCEEEEEEEecccccc
Confidence 44444444443 25666776532111220 222333 3444554 4556777765 6665 556665
Q ss_pred --CCCceEEEeecCCc--EeEEEe----CCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 222 --QKGTCIHGIDAKAQ--ICGLEW----NRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 222 --~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
..++....+..... +..+.+ ++++..++... .+...-..+..+|+.+++.
T Consensus 404 ~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~--ss~~~P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 404 VFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEY--SSLATPNTWFDVSPQDHSR 461 (751)
T ss_dssp CCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEE--EETTEEEEEEEECTTTCCE
T ss_pred cccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEE--eCCCCCCEEEEEECCCCcE
Confidence 34431344433322 334433 44666554331 1112335677788776653
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.79 E-value=3.6e-05 Score=62.78 Aligned_cols=270 Identities=10% Similarity=0.043 Sum_probs=148.3
Q ss_pred cccceeeeecC-CceEEEecCCeEEEEEecCCceeeEEee--cCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 16 DYYSKVIDWGR-NNVLAVALGPVLFLWKWENGKVKKLLQV--PGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~~~~~~i~vw~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
...+.++.+.+ +..++++..+.| +...+.++.=..... ......+..+.|.+ +..++ ++..|.|.. ..+.++.
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTSS
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCCC
Confidence 34677788865 566667777765 333444432122222 12344688999986 44444 455664443 2233332
Q ss_pred Eeeec---ccccceeEeeecCCCCCEEEEeeCCCcEEEEeccc-CCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeE
Q 019847 93 VRNLE---GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRV-SNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVV 168 (335)
Q Consensus 93 ~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 168 (335)
-.... .+...+..+.+.+ ++..++.+ .+|.|. .... +..-..........+..+.+.+++.+++.+. +|.+
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~--~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~ 185 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIY--RTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSF 185 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEE--EESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSE
T ss_pred ceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEE--EEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcE
Confidence 22221 2334567777765 55555554 455442 2222 2222233334566789999999988877765 4544
Q ss_pred EE-EEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec-----CCcEeEEEeC
Q 019847 169 RI-WERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA-----KAQICGLEWN 242 (335)
Q Consensus 169 ~i-wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~ 242 (335)
.. .|- .+...+.+. ......+..+.+.+++. +++.+ .+|.+++.+...++.-..+.. ...+..+.+.
T Consensus 186 ~~S~d~-gG~tW~~~~--~~~~~~~~~~~~~~~g~-~~~~~---~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 186 YSTWEP-GQTAWEPHN--RTTSRRLHNMGFTPDGR-LWMIV---NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp EEEECT-TCSSCEEEE--CCSSSCEEEEEECTTSC-EEEEE---TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred EEEeCC-CCCceeECC--CCCCCccceeEECCCCC-EEEEe---CCceEEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 43 331 122333332 23445688899999875 55554 578887765333443332321 2347888898
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEECCCCceeeccc---CCCCceeEeEEcCCCCEEEEEeCCCcEEEEec
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQ---SSNSRILDLSQSPDGLTVATAGADETIRFWEA 310 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~ 310 (335)
+++..++.+ .++.+ .+..+.++.-..+. .....+.++.|.+++. +++++.+|.|.-++-
T Consensus 259 ~~~~~~~~g-------~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 259 TPNEVWLAG-------GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp SSSCEEEEE-------STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred CCCEEEEEe-------CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 887766654 25655 34444444333222 2345678888876654 666778897766543
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.76 E-value=3.4e-06 Score=75.74 Aligned_cols=245 Identities=13% Similarity=0.061 Sum_probs=131.4
Q ss_pred eEEEEcC-CCCEEEEEECCC-----------cEEEEeCCCceeEe--eecc-cccceeEeeecCCCCCEEEEeeC-CCcE
Q 019847 62 TSVSWSH-DAKTLAVGYMDS-----------KLQLWDAETSKLVR--NLEG-HHRRVATSSWNHWNGHILTSGSK-DKSI 125 (335)
Q Consensus 62 ~~~~~~~-~~~~l~~~~~dg-----------~i~iw~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~~l~~~~~-dg~i 125 (335)
..+++.| +++.++.|+.+. .+.+||..+++... .+.. +.....++++.. ++.+++.|+. +..+
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDG-NGQIVVTGGNDAKKT 267 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECT-TSCEEEECSSSTTCE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCC-CCCEEEeCCCCCCce
Confidence 3667777 888888887543 58899998875432 2211 222233456666 8899999984 4589
Q ss_pred EEEecccCCeeeEEeecC-CCCEEEEEeecCCCEEEEEe-CC-----CeEEEEEccCCCccccee-----eccCCCCCee
Q 019847 126 INHDVRVSNNVTSCIKAH-SGEVCGLKWSNEGNLLASGG-DD-----NVVRIWERSKMSSSKSLH-----RFTDHCGGVK 193 (335)
Q Consensus 126 ~~~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~-----~~~~~~~~v~ 193 (335)
.+||..+..... ..... ...-.+++..+++++++.|+ .+ ..+.+||..+.. ...+. .+.....
T Consensus 268 ~~yd~~t~~W~~-~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~-W~~~~~~~~~p~~~~~~--- 342 (656)
T 1k3i_A 268 SLYDSSSDSWIP-GPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT-WTSLPNAKVNPMLTADK--- 342 (656)
T ss_dssp EEEEGGGTEEEE-CCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE-EEEETTSCSGGGCCCCT---
T ss_pred EEecCcCCceeE-CCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc-ceeCCCccccccccccc---
Confidence 999988654321 11111 11123455567899999988 34 468999976532 12110 0100000
Q ss_pred EEEecCCCCcEEEEecC-------CCCCeEEEEECCCCceEEEeecCC----------cEeEEEeC-CCCceeeeeeeee
Q 019847 194 ALAWSPHQVNVLATGGG-------REDGCIKIWNVQKGTCIHGIDAKA----------QICGLEWN-RHHKEILSGHGFS 255 (335)
Q Consensus 194 ~~~~~~~~~~~~~~~~g-------~~d~~i~i~d~~~~~~~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~~~ 255 (335)
...+..++ .+++.++. .....+..||..+........... .-.++.+. .+++.++.|..-.
T Consensus 343 ~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 343 QGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp TGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred cceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 01122333 23333320 023467889988776443322111 12333333 3566666552100
Q ss_pred e--ecCCC---eEEEEECCCCceeecc--cCCCCce-eEeEEcCCCCEEEEEeCC-----------CcEEEEecCCC
Q 019847 256 A--SGDGN---KLCLWKYPNMTKVGEL--QSSNSRI-LDLSQSPDGLTVATAGAD-----------ETIRFWEAFGP 313 (335)
Q Consensus 256 ~--~~~~~---~i~i~d~~~~~~~~~~--~~~~~~i-~~~~~~~~~~~l~~~~~d-----------g~v~iw~~~~~ 313 (335)
. ...-. .+.+||..+.+-.... ..+..+. .+++..|++++++.|+.+ ..+.+||....
T Consensus 422 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 422 YQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp SSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 0 00011 6788887765543322 2222222 345667899999999864 46889998664
No 289
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.76 E-value=3e-05 Score=60.18 Aligned_cols=204 Identities=12% Similarity=0.175 Sum_probs=127.4
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
.+.+-...+..++|.|..+.++++...++.|...|.. ++........-....-.+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3445556799999999445566667888899999987 443333222333567889999888776766567889999876
Q ss_pred CCCcccceeec------cCCCCCeeEEEecCCCCcEEEEecCCCCC-eEEEEEC-CCCceEEEeec--------CCcEeE
Q 019847 175 KMSSSKSLHRF------TDHCGGVKALAWSPHQVNVLATGGGREDG-CIKIWNV-QKGTCIHGIDA--------KAQICG 238 (335)
Q Consensus 175 ~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~g~~d~-~i~i~d~-~~~~~~~~~~~--------~~~~~~ 238 (335)
.......+... ...+.....++|+|.+..++++.- .+. .|+.|+- .....+..+.. -..+..
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E--~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE--KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE--SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC--cCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 54321111111 123455789999999988888763 333 4555551 11111222211 235788
Q ss_pred EEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCC---------CceeEeEEcCCCCEEEEEeCCCcEEEE
Q 019847 239 LEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSN---------SRILDLSQSPDGLTVATAGADETIRFW 308 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~~l~~~~~dg~v~iw 308 (335)
++++|....++.- +.....+.++|.. ++.+..+.-.. .....|+|.++|++.++ ++-+.++.+
T Consensus 178 l~~dp~tg~lliL-----S~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 178 AEFNQQKNTLLVL-----SHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp EEEETTTTEEEEE-----ETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred EEEcCCCCeEEEE-----ECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 9999987666443 3678889999965 44544432111 24578999999985555 665544444
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=2.5e-05 Score=66.60 Aligned_cols=244 Identities=11% Similarity=0.016 Sum_probs=140.7
Q ss_pred ceEEEEcC-CCCEEEEE-ECCCcEEEEeCCCceeEeeeccc---ccceeEeee-------cCCCCCEEEEeeCCC-----
Q 019847 61 PTSVSWSH-DAKTLAVG-YMDSKLQLWDAETSKLVRNLEGH---HRRVATSSW-------NHWNGHILTSGSKDK----- 123 (335)
Q Consensus 61 v~~~~~~~-~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~l~~~~~dg----- 123 (335)
...|+|+| +...|.++ ...+.|++.|++++......... ......++| ++ +++.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCccc
Confidence 56899998 34445444 44467999999887765544322 235888999 88 777555555443
Q ss_pred --cEEEEecccCCeee-----EEeecCCCCEEEEEeec-CCCEEEEEeCCCeEEEEEcc-------CCCcc---------
Q 019847 124 --SIINHDVRVSNNVT-----SCIKAHSGEVCGLKWSN-EGNLLASGGDDNVVRIWERS-------KMSSS--------- 179 (335)
Q Consensus 124 --~i~~~d~~~~~~~~-----~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~-------~~~~~--------- 179 (335)
.|.+++........ ..+... .....++++| ++.++++-..++.|..+|+. +....
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 25666543311211 122211 2335678899 55556666678889999987 33220
Q ss_pred --cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEEC--CCCceE--EEeecC----------------CcEe
Q 019847 180 --KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNV--QKGTCI--HGIDAK----------------AQIC 237 (335)
Q Consensus 180 --~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~--~~~~~~--~~~~~~----------------~~~~ 237 (335)
+.+... +.......++|+|++..++++-. ..+.|+.++. ..+... ..+... ....
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 112122 22344678999999986777655 6889999664 333220 122110 0122
Q ss_pred -EEEeC-------CCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCC------------------------CCcee
Q 019847 238 -GLEWN-------RHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSS------------------------NSRIL 285 (335)
Q Consensus 238 -~~~~~-------~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~------------------------~~~i~ 285 (335)
.+... +++...++ -.....|+.++ .++. +.++.+. -....
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVa------D~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~ 447 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFV------DRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVS 447 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEE------EGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEE
T ss_pred EEEEEccccccccCCCeEEEE------ECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCc
Confidence 33333 23333332 24578888888 4443 2222111 12357
Q ss_pred EeEEcCC-CCEEEEEeCCCcEEEEecCCCCCCC
Q 019847 286 DLSQSPD-GLTVATAGADETIRFWEAFGPSGDE 317 (335)
Q Consensus 286 ~~~~~~~-~~~l~~~~~dg~v~iw~~~~~~~~~ 317 (335)
.|+++++ +.++++=..+.+|+.++++......
T Consensus 448 gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 448 GLVYDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred EEEEECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 8999997 7766666778899999998765443
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.75 E-value=6.5e-05 Score=66.75 Aligned_cols=232 Identities=12% Similarity=0.018 Sum_probs=147.8
Q ss_pred EEEEEECCCcEEEEeCCCceeEeeec-ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEE
Q 019847 72 TLAVGYMDSKLQLWDAETSKLVRNLE-GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGL 150 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~ 150 (335)
+|+.+ ..+.|+..++++.+....+. ..-..+..++|.+.++.++++-..++.|..+++.... ..............+
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSA-LEHVVEFGLDYPEGM 85 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCC-cEEEEeCCCCCcceE
Confidence 55554 45689999998665433322 1234678999998566666676778899999987433 233333223456788
Q ss_pred EeecCCCEE-EEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEE
Q 019847 151 KWSNEGNLL-ASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHG 229 (335)
Q Consensus 151 ~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~ 229 (335)
++.+.++.| ++-...+.|.+.++.... ...+. ...-.....++++|....++.+..| ..+.|...++........
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~--~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~l 161 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLV--WKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTTL 161 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTT-CEEEE--CSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEE
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEE--eCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEEE
Confidence 888755544 554556789999976432 12221 1233457899999976677777521 357888888875554444
Q ss_pred eecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEe
Q 019847 230 IDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWE 309 (335)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~ 309 (335)
...-.....+++++++..++... ...+.|..+|+..... ..+.........+++.. +.++++-...+.|...|
T Consensus 162 ~~~~~~P~GlalD~~~~~LY~aD-----~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 162 VPNVGRANGLTIDYAKRRLYWTD-----LDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred ECCCCCcceEEEccccCEEEEEE-----CCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 44455788999999888776553 5678999999876443 22333333456778765 34444545578888888
Q ss_pred cCCCCCC
Q 019847 310 AFGPSGD 316 (335)
Q Consensus 310 ~~~~~~~ 316 (335)
..+++..
T Consensus 235 k~tg~~~ 241 (628)
T 4a0p_A 235 KTSGQNR 241 (628)
T ss_dssp TTTCCSC
T ss_pred CCCCCce
Confidence 7665543
No 292
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.73 E-value=6.2e-05 Score=62.08 Aligned_cols=278 Identities=9% Similarity=0.075 Sum_probs=181.2
Q ss_pred ccceeeeecCCceEEEec----CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 17 YYSKVIDWGRNNVLAVAL----GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~----~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
+....+.+..++++++-. +..|.|.|+..+.........+ -+.-.+|..+.+|.-. ...+.|+|+++.+.
T Consensus 25 i~f~~~TmESDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K~k 98 (494)
T 1bpo_A 25 IGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMKSK 98 (494)
T ss_dssp CSTTTEEEEETTEEEEEECCTTCCEEEEEETTSTTSCEEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTTEE
T ss_pred cccceeeeecCceEEEEecCCCCCeEEEEECCCCCcceeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHhhh
Confidence 333445555677777643 3479999988866543333322 3456899888888775 67999999999998
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCC----CCEEEEEeecCCCEEEEEeC----
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHS----GEVCGLKWSNEGNLLASGGD---- 164 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~---- 164 (335)
++.+.- ...|.--.|.. .+.|+-.+ +..|+.|++.....+.+.+..|. ..|.....+++.++++..+-
T Consensus 99 lks~~~-~e~VvfWkWis--~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~ 174 (494)
T 1bpo_A 99 MKAHTM-TDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQ 174 (494)
T ss_dssp EEEEEC-SSCCCEEEEEE--TTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEET
T ss_pred hcceec-CCCceEEEecC--CCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccC
Confidence 888774 45677888874 44454443 56899999986555666665553 46777788889998875442
Q ss_pred ---CCeEEEEEccCCCcccceeeccCCCCCeeEEEecCC--CCcEEEEec-CCCCCeEEEEECCCC---c-----eEEEe
Q 019847 165 ---DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPH--QVNVLATGG-GREDGCIKIWNVQKG---T-----CIHGI 230 (335)
Q Consensus 165 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~-g~~d~~i~i~d~~~~---~-----~~~~~ 230 (335)
.|.+.+|..+. +.-+.+++|......+....+ ...+++.+. ....+.+++.++... . ....+
T Consensus 175 ~~v~G~mQLYS~er----~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv 250 (494)
T 1bpo_A 175 NRVVGAMQLYSVDR----KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV 250 (494)
T ss_dssp TEEEEEEEEEESTT----CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEEC
T ss_pred CcccceEEEeeccc----cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeee
Confidence 36788998765 345566777655544444322 123555443 112378999988542 1 11111
Q ss_pred e--c---CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcE
Q 019847 231 D--A---KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETI 305 (335)
Q Consensus 231 ~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 305 (335)
. . ..-..++..++....+..- +.-|.+++||+.++.++..-+-....|..-+-+....=++.....|.|
T Consensus 251 ~fppe~~~DFPvamqvs~kygviyvi------TK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 251 FFPPEAQNDFPVAMQISEKHDVVFLI------TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp CCCTTSTTCCEEEEEEETTTTEEEEE------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred eCCcccccCceeEEEecccCCEEEEE------ecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 1 1 1235667777777766554 678999999999999998877666667665555554556666688888
Q ss_pred EEEecCCCC
Q 019847 306 RFWEAFGPS 314 (335)
Q Consensus 306 ~iw~~~~~~ 314 (335)
.--.++...
T Consensus 325 l~v~v~e~~ 333 (494)
T 1bpo_A 325 LSVCVEEEN 333 (494)
T ss_dssp EEEEECTTT
T ss_pred EEEEEcccc
Confidence 777666544
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.70 E-value=0.0001 Score=67.13 Aligned_cols=233 Identities=12% Similarity=0.024 Sum_probs=142.0
Q ss_pred EEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCC---eeeEEeecCCCCEE
Q 019847 72 TLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSN---NVTSCIKAHSGEVC 148 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~i~ 148 (335)
+|+.+. ...|+..++...+....+. ....+..++|.+..+.++++-...+.|+.+++.... .....+........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~ 474 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 474 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc
Confidence 444443 4568888887665444333 445678899988556666666677889999887421 12233333445567
Q ss_pred EEEeecCCC-EEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceE
Q 019847 149 GLKWSNEGN-LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCI 227 (335)
Q Consensus 149 ~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~ 227 (335)
.|++.+.++ ++++-...+.|.+.++..... ..+ +...-.....|+++|.+.+|+.+..| ..+.|...++......
T Consensus 475 GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l--~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 475 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL--FRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIY 550 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEE--EECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEE
T ss_pred eeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEE--EeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecCCCceE
Confidence 899988665 444555678999999874321 111 22233457899999987778777531 2378999998754443
Q ss_pred EEeecC-CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccC--CCCceeEeEEcCCCCEEEEEeCCCc
Q 019847 228 HGIDAK-AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQS--SNSRILDLSQSPDGLTVATAGADET 304 (335)
Q Consensus 228 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~ 304 (335)
..+... .....|++++.+..|+... ...+.|..+++........+.. ......+|++..+ .++++-...+.
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD-----~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~ 624 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 624 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEE-----TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEe-----CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCE
Confidence 333322 4688999998877776543 4568899999865544333322 1223456666433 34444445677
Q ss_pred EEEEecCCCCCC
Q 019847 305 IRFWEAFGPSGD 316 (335)
Q Consensus 305 v~iw~~~~~~~~ 316 (335)
|...+..+++..
T Consensus 625 I~~~dk~tG~~~ 636 (791)
T 3m0c_C 625 IFSANRLTGSDV 636 (791)
T ss_dssp EEEEETTTCCCC
T ss_pred EEEEeCCCCcce
Confidence 777776555443
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.63 E-value=0.00012 Score=64.87 Aligned_cols=232 Identities=7% Similarity=-0.075 Sum_probs=135.6
Q ss_pred ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCcee-EeeecccccceeE
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKL-VRNLEGHHRRVAT 105 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~-~~~~~~~~~~v~~ 105 (335)
.++.-+....|+..+++........... .-..+..++|++.+..|..+. ..+.|..++++.... ...+...-.....
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~-~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~G 88 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 88 (619)
T ss_dssp CCEEEECSSBEEEECCC---------CB-CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEE
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEEc-CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCe
Confidence 3555667788999998765322222222 234578999999777776665 467898898875432 2223323356788
Q ss_pred eeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC--CCeEEEEEccCCCccccee
Q 019847 106 SSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD--DNVVRIWERSKMSSSKSLH 183 (335)
Q Consensus 106 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~ 183 (335)
+++.+..++++++-...+.|.+.++..... .......-.....|++.|.+..|..+.. .+.|...++.... ...+
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~~~l- 165 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFII- 165 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEE-
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-eEEE-
Confidence 998874566666667788999999874332 2223234455678999997666665553 3567777765321 1122
Q ss_pred eccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCcEeEEEeCCCCceeeeeeeeeeecCCCe
Q 019847 184 RFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQICGLEWNRHHKEILSGHGFSASGDGNK 262 (335)
Q Consensus 184 ~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (335)
....-.....+++++++..|+.+-. ..+.|..+|+.......... .......+++..+ .++.. -...+.
T Consensus 166 -~~~~~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~t-----d~~~~~ 235 (619)
T 3s94_A 166 -INSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWT-----DWSTHS 235 (619)
T ss_dssp -ECSSCSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCCEEC---------CCCEEESSS--EEEEE-----CTTTCS
T ss_pred -EeCCCCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEe-----cCCCCE
Confidence 1123345789999998888888876 77899999987543322222 1122345666554 33222 245677
Q ss_pred EEEEECCCCce
Q 019847 263 LCLWKYPNMTK 273 (335)
Q Consensus 263 i~i~d~~~~~~ 273 (335)
|...|..+++.
T Consensus 236 V~~~d~~tg~~ 246 (619)
T 3s94_A 236 ILACNKYTGEG 246 (619)
T ss_dssp EEEEESSSCCC
T ss_pred EEEEECCCCcc
Confidence 88888766543
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.62 E-value=3.2e-05 Score=62.42 Aligned_cols=197 Identities=17% Similarity=0.236 Sum_probs=124.4
Q ss_pred CCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCC---CCC---EEEEeeC---CCcEEEEecccCCeeeEE
Q 019847 69 DAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHW---NGH---ILTSGSK---DKSIINHDVRVSNNVTSC 139 (335)
Q Consensus 69 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~---~l~~~~~---dg~i~~~d~~~~~~~~~~ 139 (335)
...+++.....+-+.+||+ +|+.++.+.. +.+..+...|. .+. ++++... +++|.+|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3455666667789999999 8888888763 45666666541 111 3344443 578999977422222332
Q ss_pred eec------CC-CCEEEEEe--ecC-CC-EEEEEeCCCeEEEEEccCC----CcccceeeccCCCCCeeEEEecCCCCcE
Q 019847 140 IKA------HS-GEVCGLKW--SNE-GN-LLASGGDDNVVRIWERSKM----SSSKSLHRFTDHCGGVKALAWSPHQVNV 204 (335)
Q Consensus 140 ~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 204 (335)
... .. ..+..+++ +|. +. ++++...+|.+..|++... ...+.++++.- .+.+..+...+....+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 211 11 55666777 664 43 6888888999999998542 12344555543 4578888899887777
Q ss_pred EEEecCCCCCeEEEEECC-----CCceEEEeecC---CcEeEEEe--CCCCc-eeeeeeeeeeecCCCeEEEEECC-CCc
Q 019847 205 LATGGGREDGCIKIWNVQ-----KGTCIHGIDAK---AQICGLEW--NRHHK-EILSGHGFSASGDGNKLCLWKYP-NMT 272 (335)
Q Consensus 205 ~~~~~g~~d~~i~i~d~~-----~~~~~~~~~~~---~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~i~i~d~~-~~~ 272 (335)
++.- ++..|..++.+ +++.+..+... ..+..+++ .++++ +++++ +..++...+||.. +.+
T Consensus 195 yv~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS-----sQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 195 YIAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS-----SQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp EEEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE-----EGGGTEEEEEESSTTCC
T ss_pred EEec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE-----cCCCCEEEEEECCCCCc
Confidence 7754 67667777755 34555555333 46777777 45554 45443 2457899999996 666
Q ss_pred eeecc
Q 019847 273 KVGEL 277 (335)
Q Consensus 273 ~~~~~ 277 (335)
.+..+
T Consensus 267 ~vg~f 271 (355)
T 3amr_A 267 YVADF 271 (355)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66666
No 296
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.60 E-value=0.00011 Score=59.79 Aligned_cols=234 Identities=10% Similarity=0.100 Sum_probs=128.5
Q ss_pred cccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeec-CCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeE-
Q 019847 16 DYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVP-GEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLV- 93 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~- 93 (335)
+..+..+.++++.+++++..+.|+. ..+.++.-...... .+...+..+.+.+++..++++ .+|.|..- .+.++.-
T Consensus 79 ~~~~~~i~~~~~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~ 155 (327)
T 2xbg_A 79 DYRFNSVSFQGNEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQ 155 (327)
T ss_dssp CCEEEEEEEETTEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEE
T ss_pred CccEEEEEecCCeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCE
Confidence 4456778888877777777775544 33334432222211 233457788887777666555 46654321 2223221
Q ss_pred eeecccccceeEeeecCCCCCEEEEeeCCCcEEE-EecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEE
Q 019847 94 RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIIN-HDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWE 172 (335)
Q Consensus 94 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~-~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd 172 (335)
.........+..+.+.+ ++.+++.+. +|.+.. .|-. +..-..........+..+.+.++++.++ ++.+|.+++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~ 231 (327)
T 2xbg_A 156 ALVQEAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSD 231 (327)
T ss_dssp EEECSCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEE
T ss_pred EeecCCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEec
Confidence 12223455788899988 777776654 444433 3321 1111111234556788999999887664 45678887764
Q ss_pred ccCCCcccceeec-cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec----CCcEeEEEeCCCCce
Q 019847 173 RSKMSSSKSLHRF-TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA----KAQICGLEWNRHHKE 247 (335)
Q Consensus 173 ~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 247 (335)
...+.....+... ......+..+.+.+++ .+++++ .++.+ ++....++.-..+.. +..+..+.+.+++..
T Consensus 232 ~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g---~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~ 306 (327)
T 2xbg_A 232 PDNSENWGELLSPLRRNSVGFLDLAYRTPN-EVWLAG---GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQG 306 (327)
T ss_dssp TTEEEEECCCBCTTSSCCSCEEEEEESSSS-CEEEEE---STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEE
T ss_pred CCCCCeeEeccCCcccCCcceEEEEecCCC-EEEEEe---CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCce
Confidence 2222222222211 0122358889998876 466665 46766 444455544433331 346778888766665
Q ss_pred eeeeeeeeeecCCCeEEEEEC
Q 019847 248 ILSGHGFSASGDGNKLCLWKY 268 (335)
Q Consensus 248 ~~~~~~~~~~~~~~~i~i~d~ 268 (335)
++. +.+|.|.-++-
T Consensus 307 ~~~-------G~~G~i~~~~~ 320 (327)
T 2xbg_A 307 FIL-------GQKGILLRYVT 320 (327)
T ss_dssp EEE-------CSTTEEEEECC
T ss_pred EEE-------cCCceEEEEcC
Confidence 554 45777766653
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.59 E-value=0.00012 Score=65.05 Aligned_cols=228 Identities=16% Similarity=0.095 Sum_probs=133.6
Q ss_pred CCcEEEEeCCCce-eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCC
Q 019847 79 DSKLQLWDAETSK-LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGN 157 (335)
Q Consensus 79 dg~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 157 (335)
...|+..++.... ........-..+..++|++.++.++++-...+.|..+++...................+++.+.++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 5578888887543 222222334567899999845555556556788998988754322223333335788999999555
Q ss_pred -EEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cCCc
Q 019847 158 -LLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AKAQ 235 (335)
Q Consensus 158 -~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~~~ 235 (335)
++++-...+.|.+.++..... +.+. ...-.....+++.|.+..++.+.-| ..+.|...++.......... .-..
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~-~~l~--~~~l~~P~~Iavdp~~g~ly~tD~g-~~~~I~r~~~dG~~~~~l~~~~~~~ 172 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLR-KVLF--WQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINSEIYW 172 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-EEEE--CSSCSCCCCEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEECSSCSS
T ss_pred EEEEEeCCCCEEEEEECCCCCE-EEEE--eCCCCCCceEEEecCCCeEEEeccC-CCCEEEEEECCCCceEEEEeCCCCC
Confidence 445555678999999874321 1121 1233456789999987777777532 35678888876433322222 2345
Q ss_pred EeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCCCC
Q 019847 236 ICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGPSG 315 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~~~ 315 (335)
...+++++++..++... ...+.|..+|+..................|++..+ .++.+-...+.|...|..+++.
T Consensus 173 P~Glald~~~~~LY~aD-----~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWAD-----AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEEEEEETTTTEEEEEE-----TTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred CcEEEEEccCCEEEEEe-----CCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 78899999877776543 55788999998754443332222223456777666 4444445677888888876654
Q ss_pred C
Q 019847 316 D 316 (335)
Q Consensus 316 ~ 316 (335)
.
T Consensus 247 ~ 247 (619)
T 3s94_A 247 L 247 (619)
T ss_dssp C
T ss_pred c
Confidence 3
No 298
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.54 E-value=8.5e-05 Score=59.98 Aligned_cols=187 Identities=13% Similarity=0.236 Sum_probs=119.4
Q ss_pred CCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecC----CC---EEEEEeC---CCeEEEEEccCCCcccc
Q 019847 112 NGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE----GN---LLASGGD---DNVVRIWERSKMSSSKS 181 (335)
Q Consensus 112 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---dg~i~iwd~~~~~~~~~ 181 (335)
...+++.....+-+.+||+ .++. ++.+.. +.++.+..-|+ ++ ++++... +.+|.+|++.... ..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~-l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~--~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKM-LHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN--GT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCE-EEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT--CC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcE-EEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC--Cc
Confidence 3456666677889999999 4555 443432 56777777663 22 2333333 4789999874211 12
Q ss_pred eeeccC------CC-CCeeEEEe--cCCCC-cEEEEecCCCCCeEEEEECC-------CCceEEEeecCCcEeEEEeCCC
Q 019847 182 LHRFTD------HC-GGVKALAW--SPHQV-NVLATGGGREDGCIKIWNVQ-------KGTCIHGIDAKAQICGLEWNRH 244 (335)
Q Consensus 182 ~~~~~~------~~-~~v~~~~~--~~~~~-~~~~~~~g~~d~~i~i~d~~-------~~~~~~~~~~~~~~~~~~~~~~ 244 (335)
+..+.. .. ..+..+|+ +|... ..+.+.. .+|.+..|++. +.+.++++.....+..+...+.
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~--k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~ 190 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG--KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDE 190 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC--SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC--CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCC
Confidence 333311 11 45667777 77543 3344433 68999999882 3467888888889999999998
Q ss_pred CceeeeeeeeeeecCCCeEEEEECC-----CCceeeccc-CC-CCceeEeEE--cCCCC-EEEEEe-CCCcEEEEecCC
Q 019847 245 HKEILSGHGFSASGDGNKLCLWKYP-----NMTKVGELQ-SS-NSRILDLSQ--SPDGL-TVATAG-ADETIRFWEAFG 312 (335)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~i~d~~-----~~~~~~~~~-~~-~~~i~~~~~--~~~~~-~l~~~~-~dg~v~iw~~~~ 312 (335)
...++.+ .++..|..|+.+ +++.+..+. ++ ...+..|++ .++++ +|++++ .+....+||...
T Consensus 191 ~g~Lyv~------eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 191 YGRLYIA------EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp TTEEEEE------ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred CCeEEEe------cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 8888877 566667777754 344554442 22 235788887 45555 666666 577899999963
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.53 E-value=1.6e-06 Score=78.13 Aligned_cols=225 Identities=12% Similarity=0.014 Sum_probs=130.4
Q ss_pred CCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccC---CeeeEEeecCCCCEEEEEeecC
Q 019847 79 DSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVS---NNVTSCIKAHSGEVCGLKWSNE 155 (335)
Q Consensus 79 dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~i~~~~~~~~ 155 (335)
.+.|+..++.+.+....+. ....+..++|.+..+.++++-...+.|+.+++... ......+.........|++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 4578888887766554443 33467789998844445555556688999998741 1111212112223456788754
Q ss_pred -CCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee-cC
Q 019847 156 -GNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID-AK 233 (335)
Q Consensus 156 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~-~~ 233 (335)
++++++-...+.|.++++..... ...+.........++++|.+.+|+.+..+ ..+.|..+++........+. .-
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~---~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~~~~~l~~~~l 539 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKR---KTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVTENI 539 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCE---EEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSCCCCEESCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCce---EEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCCCeeEEEeCCC
Confidence 44555545567899998764221 11112222446788999987777776431 23678888875432221111 12
Q ss_pred CcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeeccc--CCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 234 AQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQ--SSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
.....|+++|++..|+... ...+.|..+++........+. ........|++..+ .++++....+.|..++..
T Consensus 540 ~~PnGlavd~~~~~LY~aD-----~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVD-----SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp SSCCCEEECTTTCCEEEEE-----TTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred CCccEEEEeccCCEEEEEe-----cCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 3467899999887776543 557889999986533322222 12223456676554 455555667889998875
Q ss_pred CCC
Q 019847 312 GPS 314 (335)
Q Consensus 312 ~~~ 314 (335)
+++
T Consensus 614 ~G~ 616 (699)
T 1n7d_A 614 TGS 616 (699)
T ss_dssp TEE
T ss_pred CCC
Confidence 543
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.50 E-value=9.9e-05 Score=59.05 Aligned_cols=203 Identities=12% Similarity=0.090 Sum_probs=128.4
Q ss_pred ccccceeeeecC--CceEEEe-cCCeEEEEEecCCceeeEEeecC----CC--CCceEEEE---cCCCCEEEEEE-----
Q 019847 15 EDYYSKVIDWGR--NNVLAVA-LGPVLFLWKWENGKVKKLLQVPG----ED--DYPTSVSW---SHDAKTLAVGY----- 77 (335)
Q Consensus 15 ~~~~~~~~~~~~--~~~~~~~-~~~~i~vw~~~~~~~~~~~~~~~----~~--~~v~~~~~---~~~~~~l~~~~----- 77 (335)
...+..+..|++ +.++.++ ..++|..|+...+..... .+++ .+ ..+..+.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 345667799987 5666666 689999999986665544 4443 11 13579999 68877777543
Q ss_pred --------CCCcEEEEeCC---CceeEeeec--cc-----------ccceeEeeecCCCCCEEEEeeCC-CcEEEEeccc
Q 019847 78 --------MDSKLQLWDAE---TSKLVRNLE--GH-----------HRRVATSSWNHWNGHILTSGSKD-KSIINHDVRV 132 (335)
Q Consensus 78 --------~dg~i~iw~~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~~l~~~~~d-g~i~~~d~~~ 132 (335)
.+..+..||+. +++.+.... .. ......++..+ +++..++++.. +.|...+...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTS
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCC
Confidence 25779999999 777665443 11 12478899998 99999998888 8887777663
Q ss_pred CCeeeEEeec-----CCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeec-cCC---CCCeeEE-EecCCCC
Q 019847 133 SNNVTSCIKA-----HSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRF-TDH---CGGVKAL-AWSPHQV 202 (335)
Q Consensus 133 ~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~---~~~v~~~-~~~~~~~ 202 (335)
. ........ .....+.|+++|+++.|++....|.+..+|++..... .+..- .+. -.....+ ..-.+|+
T Consensus 169 ~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 169 K-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp C-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred C-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCcccccCcccccccccCCE
Confidence 3 22211111 1223668999999999998877999999998843210 12111 011 1122332 3334565
Q ss_pred cEEEEecCCCCCeEEEEECCC
Q 019847 203 NVLATGGGREDGCIKIWNVQK 223 (335)
Q Consensus 203 ~~~~~~~g~~d~~i~i~d~~~ 223 (335)
.++++.. ..+.+.+.+...
T Consensus 247 vllV~~~--~~~~~~l~S~Dg 265 (334)
T 2p9w_A 247 SVLVGAR--APYAISFRSWDN 265 (334)
T ss_dssp EEEEEEE--TTEEEEEECSST
T ss_pred EEEEEcC--CCCEEEEECCCC
Confidence 5455554 456666665544
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=0.00043 Score=59.07 Aligned_cols=155 Identities=8% Similarity=0.085 Sum_probs=97.2
Q ss_pred ceeeeecC---CceEEEec-CCeEEEEEecCCceeeEEeecC-CCCCceEEEE-------cCCCCEEEEEECCC------
Q 019847 19 SKVIDWGR---NNVLAVAL-GPVLFLWKWENGKVKKLLQVPG-EDDYPTSVSW-------SHDAKTLAVGYMDS------ 80 (335)
Q Consensus 19 ~~~~~~~~---~~~~~~~~-~~~i~vw~~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~~l~~~~~dg------ 80 (335)
...|+++| +.++++.. .+.|++.|.+++.+..+..... ....+..++| ++++++|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 44677775 34555543 3678888988887765554321 2235799999 99999777776543
Q ss_pred -cEEEEeCCC-ceeE-----eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc-------cCCe-----------
Q 019847 81 -KLQLWDAET-SKLV-----RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR-------VSNN----------- 135 (335)
Q Consensus 81 -~i~iw~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~-------~~~~----------- 135 (335)
.|.+++... ++.. ..+.. -.....++.+|.++.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266665433 2221 12221 23456778888667777777788899999997 3332
Q ss_pred eeEEee-cCCCCEEEEEeecCCCEEEEE-eCCCeEEEEEcc
Q 019847 136 VTSCIK-AHSGEVCGLKWSNEGNLLASG-GDDNVVRIWERS 174 (335)
Q Consensus 136 ~~~~~~-~~~~~i~~~~~~~~~~~l~~~-~~dg~i~iwd~~ 174 (335)
...... +.......++|+|++++|..+ +....|+.++..
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 011111 223446789999999965444 456788887654
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.45 E-value=0.00028 Score=58.05 Aligned_cols=226 Identities=13% Similarity=0.155 Sum_probs=117.8
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee--Eeeec---ccccceeEeeecCCC----CCEEEEeeCC-----Cc
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL--VRNLE---GHHRRVATSSWNHWN----GHILTSGSKD-----KS 124 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~---~~~~~v~~~~~~~~~----~~~l~~~~~d-----g~ 124 (335)
.....++|.|+|+++ ++..+|.|.+++ +++. +..+. ........++++| + +.+.++-... +.
T Consensus 31 ~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLPDGGML-IAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCccE
Confidence 456899999999854 455679999998 3432 22221 2245688999998 5 4444444432 67
Q ss_pred EEEEecccCC-----eeeEEee---cCCCCEEEEEeecCCCEEEEEeC-------------CCeEEEEEccCCC------
Q 019847 125 IINHDVRVSN-----NVTSCIK---AHSGEVCGLKWSNEGNLLASGGD-------------DNVVRIWERSKMS------ 177 (335)
Q Consensus 125 i~~~d~~~~~-----~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~------ 177 (335)
|..++..... .+...+. ........++|.|+|.++++.+. .|.|.-++....-
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 7788776321 1122122 11112368999999976666432 2566666644200
Q ss_pred -----cccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC-------eEEEEECCCCc------------------eE
Q 019847 178 -----SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG-------CIKIWNVQKGT------------------CI 227 (335)
Q Consensus 178 -----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~-------~i~i~d~~~~~------------------~~ 227 (335)
....+.. .++ .....++|+|+...++++-.| .+. .|.+. ..+. ++
T Consensus 187 ~~~~~~~~~i~a-~G~-rnp~g~a~d~~~g~l~v~d~g-~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 187 LGRRGARPEVYS-LGH-RNPQGLAWHPKTGELFSSEHG-PSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp TTCTTSCTTEEE-ECC-SEECCCEECTTTCCEEEEEEC-C------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred cCCCCCCccEEE-EcC-CCcccEEEECCCCCEEEEEcC-CCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCe
Confidence 0001111 122 225678999944456665432 222 23332 2221 11
Q ss_pred EEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce------eecccCCCCceeEeEEcCCCCEEEEEe
Q 019847 228 HGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK------VGELQSSNSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~------~~~~~~~~~~i~~~~~~~~~~~l~~~~ 300 (335)
..+..+.....++| .+|..+++ ....+.|...++..... ...+-.....+..+++.|||.++++..
T Consensus 262 ~~~~~~~ap~G~~~-~~G~l~v~------~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 262 YFWPQGFPPGNLAF-FRGDLYVA------GLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp EECTTCCCEEEEEE-ETTEEEEE------ETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred EecCCCCCCcceEE-ECCEEEEE------ECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 22222223445555 34443332 24466777776654321 112212235688999999997776654
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.28 E-value=0.00042 Score=55.51 Aligned_cols=168 Identities=11% Similarity=0.175 Sum_probs=110.6
Q ss_pred EeecCCCCCceEEEEcCCCCEEEEEE-CCCcEEEEeCCCceeEee-ecc----c--ccceeEeee---cCCCCCEEEEee
Q 019847 52 LQVPGEDDYPTSVSWSHDAKTLAVGY-MDSKLQLWDAETSKLVRN-LEG----H--HRRVATSSW---NHWNGHILTSGS 120 (335)
Q Consensus 52 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~~l~~~~ 120 (335)
+.++......-+++|.+....|..++ ..|.|..|+...+..... +.. . ...+..+.| .| ++.++++..
T Consensus 6 i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~ 84 (334)
T 2p9w_A 6 IDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMK 84 (334)
T ss_dssp EEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEE
T ss_pred EEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEc
Confidence 44555566677899998666777776 789999999976543322 322 1 124578999 57 677777543
Q ss_pred -------------CCCcEEEEecc---cCCeeeEEe-ec-----------CCCCEEEEEeecCCCEEEEEeCC-CeEEEE
Q 019847 121 -------------KDKSIINHDVR---VSNNVTSCI-KA-----------HSGEVCGLKWSNEGNLLASGGDD-NVVRIW 171 (335)
Q Consensus 121 -------------~dg~i~~~d~~---~~~~~~~~~-~~-----------~~~~i~~~~~~~~~~~l~~~~~d-g~i~iw 171 (335)
.+..+..||+. +++.....- .. .......++..++|+..++++.. +.|...
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 25779999998 555433221 11 12347899999999999999988 887777
Q ss_pred EccCCCccccee-ec--cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC
Q 019847 172 ERSKMSSSKSLH-RF--TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG 224 (335)
Q Consensus 172 d~~~~~~~~~~~-~~--~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~ 224 (335)
+.... ...... .. .......+.++++|++..|++.. ..|.+..+|+.+.
T Consensus 165 ~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~---~~g~L~~fD~~~p 216 (334)
T 2p9w_A 165 SADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG---GPRALTAFDVSKP 216 (334)
T ss_dssp CTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES---SSSSEEEEECSSS
T ss_pred eCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEc---CCCeEEEEcCCCC
Confidence 75432 111111 01 11122367999999997777765 3899999998843
No 304
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.26 E-value=0.00031 Score=66.63 Aligned_cols=280 Identities=8% Similarity=0.069 Sum_probs=169.0
Q ss_pred cccceeeeecCCceEEEe----cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCce
Q 019847 16 DYYSKVIDWGRNNVLAVA----LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK 91 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~----~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 91 (335)
.+....+.+..++++++- .+..|.|.|+..+.......+. --+.-.+|..+.+|.-. ..++.|+|+++.+
T Consensus 24 ~i~f~~~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~rrpi~-----AdsAIMnP~~~iiALra-g~~lQiFnl~~k~ 97 (1630)
T 1xi4_A 24 NIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPIS-----ADSAIMNPASKVIALKA-GKTLQIFNIEMKS 97 (1630)
T ss_pred cccccceeeecCceEEEEecCCCCceEEEEECCCCCCccccccc-----chhhccCCCcceEEEec-CCeEEEeehHHhh
Confidence 344445556667777764 2347899998876543222222 12345788888777764 6789999999988
Q ss_pred eEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecC----CCCEEEEEeecCCCEEEEEe----
Q 019847 92 LVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAH----SGEVCGLKWSNEGNLLASGG---- 163 (335)
Q Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~---- 163 (335)
.++.+.- ..+|.--.|.. .+.|+-.+ +..|..|++.....+.+.+..| ...|..-..+++.++++..+
T Consensus 98 klks~~~-~e~VvfWkWis--~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~ 173 (1630)
T 1xi4_A 98 KMKAHTM-TDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQ 173 (1630)
T ss_pred hhccccc-CCCceEEEecC--CCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccC
Confidence 8877764 45677778874 44444433 4679999997544444444444 45677777888888887544
Q ss_pred ---CCCeEEEEEccCCCcccceeeccCCCCCeeEEEec--CCCCcEEEEec-CCCCCeEEEEECCCC---ceEE-----E
Q 019847 164 ---DDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWS--PHQVNVLATGG-GREDGCIKIWNVQKG---TCIH-----G 229 (335)
Q Consensus 164 ---~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~-g~~d~~i~i~d~~~~---~~~~-----~ 229 (335)
-.|.+.+|..+.. .-+.+.+|.+....+... +....+++.+. ....+.++|.++... .... .
T Consensus 174 ~~~v~G~mQLyS~er~----~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~ 249 (1630)
T 1xi4_A 174 QNRVVGAMQLYSVDRK----VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVD 249 (1630)
T ss_pred CCcccceeeeeecccc----cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccccc
Confidence 3478889987653 344555665554444332 22233544432 012368888887542 1100 0
Q ss_pred --eec---CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEeCCCc
Q 019847 230 --IDA---KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAGADET 304 (335)
Q Consensus 230 --~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 304 (335)
++. ..-..++..++....+..- +.-|.+++||+.++..+..-+-....|...+-++...=++.....|.
T Consensus 250 ~~~~~~~~~Dfpv~~~vs~k~g~iy~i------tk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~ 323 (1630)
T 1xi4_A 250 VFFPPEAQNDFPVAMQISEKHDVVFLI------TKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQ 323 (1630)
T ss_pred ccCCcccccCcceEEEeccccCEEEEE------ecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCce
Confidence 111 1124556666666655544 66899999999999998776655555554444433333444556677
Q ss_pred EEEEecCCCCC
Q 019847 305 IRFWEAFGPSG 315 (335)
Q Consensus 305 v~iw~~~~~~~ 315 (335)
|.--.+.....
T Consensus 324 vl~v~v~~~~i 334 (1630)
T 1xi4_A 324 VLSVCVEEENI 334 (1630)
T ss_pred EEEEEEccchh
Confidence 66666555443
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.24 E-value=0.00045 Score=56.46 Aligned_cols=184 Identities=10% Similarity=0.029 Sum_probs=109.6
Q ss_pred CceEEEEcCCCCEEEEE------------ECCCcEEEEeCCCce-eEeeec--c-----cccceeEeeecCC-CC--CEE
Q 019847 60 YPTSVSWSHDAKTLAVG------------YMDSKLQLWDAETSK-LVRNLE--G-----HHRRVATSSWNHW-NG--HIL 116 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~~~------------~~dg~i~iw~~~~~~-~~~~~~--~-----~~~~v~~~~~~~~-~~--~~l 116 (335)
..-.+...|+|..++++ ..+|.|.++|.++.. ....+. + .......+.+.+. ++ .++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 45677788877544443 168999999987421 112222 1 2235666666441 23 244
Q ss_pred EEeeC--CCcEEEEecccCCeeeE---Eeec-CCCCEEEEEeecCCCEEEEEe-----------------CCCeEEEEEc
Q 019847 117 TSGSK--DKSIINHDVRVSNNVTS---CIKA-HSGEVCGLKWSNEGNLLASGG-----------------DDNVVRIWER 173 (335)
Q Consensus 117 ~~~~~--dg~i~~~d~~~~~~~~~---~~~~-~~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~iwd~ 173 (335)
++-.. +.+|.+|++........ .+.+ .-...+.+.+.++|++.++.. ..|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 44333 46788888765433222 2222 124578999999998777654 1245555553
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC-Cce--EEEeecCCcEeEEEeCC-CCceee
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK-GTC--IHGIDAKAQICGLEWNR-HHKEIL 249 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~-~~~--~~~~~~~~~~~~~~~~~-~~~~~~ 249 (335)
. . .......-...+.++|+||++.++++.+ ..+.|..|++.. ++. ...+......-.+++++ +|...+
T Consensus 211 ~---~---~~~~~~~l~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 211 N---D---VRVVAEGFDFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp T---C---CEEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEE
T ss_pred C---e---EEEeecCCcccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEE
Confidence 2 1 2222222344689999999998888876 788999999863 332 22344456677888998 588766
Q ss_pred ee
Q 019847 250 SG 251 (335)
Q Consensus 250 ~~ 251 (335)
++
T Consensus 283 a~ 284 (355)
T 3sre_A 283 GC 284 (355)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.14 E-value=0.0022 Score=52.71 Aligned_cols=229 Identities=14% Similarity=0.148 Sum_probs=122.5
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCce-eEeeec---ccccceeEeeecCC---CCCEEEEeeC---C----Cc
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSK-LVRNLE---GHHRRVATSSWNHW---NGHILTSGSK---D----KS 124 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~l~~~~~---d----g~ 124 (335)
.....++|.|+|+ |+++..+|.|++++ .+++ .+..+. ........++++|. ++.+.++-.. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4578999999997 55556679999997 3454 222221 12356889999983 2444444332 3 56
Q ss_pred EEEEecccCC------e-eeEEeec-CCCCEEEEEeecCCCEEEEEeC-------------CCeEEEEEccCCCc-----
Q 019847 125 IINHDVRVSN------N-VTSCIKA-HSGEVCGLKWSNEGNLLASGGD-------------DNVVRIWERSKMSS----- 178 (335)
Q Consensus 125 i~~~d~~~~~------~-~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~----- 178 (335)
|..|+..... + +...+.. .......++|.|+|.++++.+. .|.|.-++....-.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 7777765431 1 1111221 1112467999999987776432 24566555432100
Q ss_pred -ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC--eEEEEECCCCc------------------eEEEe-ecCCcE
Q 019847 179 -SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG--CIKIWNVQKGT------------------CIHGI-DAKAQI 236 (335)
Q Consensus 179 -~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~--~i~i~d~~~~~------------------~~~~~-~~~~~~ 236 (335)
...+.. .++. ....++|+|+...++++-.+ .++ .|.+.. .+. ++..+ ..+...
T Consensus 187 ~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d~g-~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 187 PNSPIWS-YGHR-NPQGIDWHRASGVMVATEHG-PVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp TTCCEEE-ECCS-CCCEEEECTTTCCEEEEECC-SSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCcEEE-EccC-CcceEEEeCCCCCEEEEecC-CCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 001111 2232 34679999944456666432 221 233332 221 12222 223346
Q ss_pred eEEEeC-------CCCceeeeeeeeeeecCCCeEEEEECCCC-cee--ecc-cCCCCceeEeEEcCCCCEEEEEe
Q 019847 237 CGLEWN-------RHHKEILSGHGFSASGDGNKLCLWKYPNM-TKV--GEL-QSSNSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 237 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-~~~--~~~-~~~~~~i~~~~~~~~~~~l~~~~ 300 (335)
..+++. .+|.++++. ...+.|...++... +.. ..+ ......+..+++.|||.++++..
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~------~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIAC------LRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEE------TTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cceEEECCCCCcccCCcEEEEE------cCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 667773 344444332 45678888887653 221 122 22245789999999997766654
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.12 E-value=0.0014 Score=52.52 Aligned_cols=232 Identities=14% Similarity=0.120 Sum_probs=112.8
Q ss_pred CCCEEEEEE-CC-----CcEEEEeCCCceeEee--ecccccceeEeeecCCCCCEEEEeeCC-----CcEEEEecccCC-
Q 019847 69 DAKTLAVGY-MD-----SKLQLWDAETSKLVRN--LEGHHRRVATSSWNHWNGHILTSGSKD-----KSIINHDVRVSN- 134 (335)
Q Consensus 69 ~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~- 134 (335)
++..++.|+ .+ ..+.+||..+.+.... +.........+.. ++.+++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL---HDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE---CCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 445566665 32 3688999887754332 2111111122222 67788888765 468899987665
Q ss_pred --eeeE-EeecCCCCEEEEEeecCCCEEEEEeCC-----CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEE
Q 019847 135 --NVTS-CIKAHSGEVCGLKWSNEGNLLASGGDD-----NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLA 206 (335)
Q Consensus 135 --~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 206 (335)
.... .+.........+. .++++++.|+.+ ..+.+||+.+.. ...+............+.+ ++ .+++
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~-~iyv 164 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNIDQ-WSMLGDMQTAREGAGLVVA--SG-VIYC 164 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE-EEEEEECSSCCBSCEEEEE--TT-EEEE
T ss_pred CeeEECCCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCCe-EEECCCCCCCcccceEEEE--CC-EEEE
Confidence 2111 1111111112222 256777777654 368888876532 2333332222222222222 33 5777
Q ss_pred EecCC---CCCeEEEEECCCCceEEEeecCCc--EeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCcee--ecccC
Q 019847 207 TGGGR---EDGCIKIWNVQKGTCIHGIDAKAQ--ICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKV--GELQS 279 (335)
Q Consensus 207 ~~~g~---~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~--~~~~~ 279 (335)
.|+.. .-..+.+||+.+.+-...-..+.+ -.++.. -+++.++.|.. ........+.+||..+.+-. ..+..
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~-~~~~~~~~v~~yd~~~~~W~~~~~~p~ 242 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL-LNDHIYVVGGF-DGTAHLSSVEAYNIRTDSWTTVTSMTT 242 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCB-CSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE-ECCEEEEEeCC-CCCcccceEEEEeCCCCcEEECCCCCC
Confidence 76411 124688999887754433221111 111222 24444444421 00011357899998875432 22222
Q ss_pred CCCceeEeEEcCCCCEEEEEeCC-----CcEEEEecCCC
Q 019847 280 SNSRILDLSQSPDGLTVATAGAD-----ETIRFWEAFGP 313 (335)
Q Consensus 280 ~~~~i~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~ 313 (335)
.......+. -++++++.|+.+ ..+.+||+...
T Consensus 243 ~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 243 PRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred cccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 111122222 266777778765 34677777654
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.12 E-value=0.0025 Score=52.39 Aligned_cols=224 Identities=7% Similarity=0.049 Sum_probs=118.4
Q ss_pred ceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeec---CCCCCceEEEEcCC---CCEEEEEEC-C-----CcEEEE
Q 019847 19 SKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVP---GEDDYPTSVSWSHD---AKTLAVGYM-D-----SKLQLW 85 (335)
Q Consensus 19 ~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i~iw 85 (335)
...++|.++ +++++..++.|++++ +++......++ ........++++|+ +..|.++.. . +.|..+
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 456888774 677777789999988 45543333222 22456799999998 555555443 2 578888
Q ss_pred eCCCce-----e-Eeeec---ccccceeEeeecCCCCCEEEEeeCC-------------CcEEEEecccC----------
Q 019847 86 DAETSK-----L-VRNLE---GHHRRVATSSWNHWNGHILTSGSKD-------------KSIINHDVRVS---------- 133 (335)
Q Consensus 86 ~~~~~~-----~-~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~---------- 133 (335)
+...++ . +..+. ........++|.| ++.+.++.+.. |.|.-++....
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 876431 1 11122 1112346899999 88777764422 45555555420
Q ss_pred --CeeeEEeecCCCCEEEEEeec-CCCEEEEEeCCCeE------EEEEccCCCc---------------ccceeeccCCC
Q 019847 134 --NNVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDNVV------RIWERSKMSS---------------SKSLHRFTDHC 189 (335)
Q Consensus 134 --~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i------~iwd~~~~~~---------------~~~~~~~~~~~ 189 (335)
........++ .....++|+| +++++++-.....+ .+.-+..+.. ..++..+. +.
T Consensus 190 ~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~ 267 (352)
T 2ism_A 190 RGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP-QG 267 (352)
T ss_dssp TTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT-TC
T ss_pred CCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC-CC
Confidence 0111111222 2356789999 66655553322221 1222222210 11222222 22
Q ss_pred CCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce-------EEEeecCCcEeEEEeCCCCceeeee
Q 019847 190 GGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC-------IHGIDAKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 190 ~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (335)
.....++| .++ .++++.. ..+.|...++..... ...+.....+..+++.|+|...++.
T Consensus 268 ~ap~G~~~-~~G-~l~v~~~--~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 268 FPPGNLAF-FRG-DLYVAGL--RGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CCEEEEEE-ETT-EEEEEET--TTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred CCCcceEE-ECC-EEEEEEC--CCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 34566777 344 4555543 567788777754321 1112233567888888888655543
No 309
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.10 E-value=0.0011 Score=54.91 Aligned_cols=146 Identities=10% Similarity=0.079 Sum_probs=99.2
Q ss_pred cCCceEEEecCCeEEEEEecCCceeeEEeecC--CCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee----------
Q 019847 25 GRNNVLAVALGPVLFLWKWENGKVKKLLQVPG--EDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL---------- 92 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---------- 92 (335)
.++.-+....++.||.-++..+..-+.+..+. .-..|..+..+|+|++||..+ +..|.|-.+..+..
T Consensus 30 ~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 34444555567889988887554445555553 233688999999999999986 55899998873321
Q ss_pred --Eeeecc------cccceeEeeecCC--CCCEEEEeeCCCcEEEEecccCCeeeEEee---------cCCCCEEEEEee
Q 019847 93 --VRNLEG------HHRRVATSSWNHW--NGHILTSGSKDKSIINHDVRVSNNVTSCIK---------AHSGEVCGLKWS 153 (335)
Q Consensus 93 --~~~~~~------~~~~v~~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---------~~~~~i~~~~~~ 153 (335)
.+.+.- ...+|..+.|+|. .+..|++-..|+.|++||+.........+. .....|.+++|.
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg 188 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFS 188 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEEC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEc
Confidence 112221 2467999999994 345899999999999999985221111221 223678899999
Q ss_pred cCCCEEEEEe--CCCeEEEE
Q 019847 154 NEGNLLASGG--DDNVVRIW 171 (335)
Q Consensus 154 ~~~~~l~~~~--~dg~i~iw 171 (335)
+++-.|...+ .+|.|+-.
T Consensus 189 ~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 189 KDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSSCEEEEECTTSCEEEEE
T ss_pred CCCcEEEEEecCCCCCEEEE
Confidence 9887677655 78888754
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.01 E-value=0.0033 Score=50.50 Aligned_cols=224 Identities=10% Similarity=0.044 Sum_probs=111.9
Q ss_pred CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC----CcEEEEeCCCceeEee--ecccccceeEeee
Q 019847 35 GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD----SKLQLWDAETSKLVRN--LEGHHRRVATSSW 108 (335)
Q Consensus 35 ~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~ 108 (335)
...+.+||..+++......++.....-..+. -+++.++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 100 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA 100 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE
Confidence 4589999999888765544433222223333 366677777754 6788999988754332 2211112222222
Q ss_pred cCCCCCEEEEeeCC------CcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeC---------CCeEEEEEc
Q 019847 109 NHWNGHILTSGSKD------KSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGD---------DNVVRIWER 173 (335)
Q Consensus 109 ~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---------dg~i~iwd~ 173 (335)
++.+++.|+.+ ..+.+||..+..............-.+++. -++++++.|+. -..+.+||+
T Consensus 101 ---~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 101 ---EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp ---TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred ---CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCC
Confidence 67788888765 468889987654311110011111111222 25667777653 345888997
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC-----CeEEEEECCCCceEEEeecCC--cEeEEEeCCCCc
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED-----GCIKIWNVQKGTCIHGIDAKA--QICGLEWNRHHK 246 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d-----~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~ 246 (335)
.+.. ...+..+.........+.+ ++ .+++.|+ .+ ..+.+||+.+.+-...-..+. .-..+... +++
T Consensus 177 ~~~~-W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG--~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~ 249 (306)
T 3ii7_A 177 ATET-WTELCPMIEARKNHGLVFV--KD-KIFAVGG--QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV-GSI 249 (306)
T ss_dssp TTTE-EEEECCCSSCCBSCEEEEE--TT-EEEEECC--EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE-TTE
T ss_pred CCCe-EEECCCccchhhcceEEEE--CC-EEEEEeC--CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE-CCE
Confidence 7532 2333222211111222222 33 5777764 22 468899998765432211111 11112211 444
Q ss_pred eeeeeeeeeeecCCCeEEEEECCCCc
Q 019847 247 EILSGHGFSASGDGNKLCLWKYPNMT 272 (335)
Q Consensus 247 ~~~~~~~~~~~~~~~~i~i~d~~~~~ 272 (335)
.++.|.. .....-..+.+||..+.+
T Consensus 250 i~v~GG~-~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 250 VYVLAGF-QGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEEECB-CSSSBCCEEEEEETTTTE
T ss_pred EEEEeCc-CCCeeeeeEEEEcCCCCe
Confidence 4444421 111123568888887643
No 311
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.00 E-value=0.0043 Score=51.01 Aligned_cols=240 Identities=13% Similarity=0.143 Sum_probs=122.6
Q ss_pred CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee---e----cccccceeEeeecCC---CCCEEEEeeC-------C
Q 019847 60 YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN---L----EGHHRRVATSSWNHW---NGHILTSGSK-------D 122 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~~l~~~~~-------d 122 (335)
....++|.|+|+.|+++...|.|++++.. ++.... + .........++++|. ++.+.++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46899999999845555678999999853 332211 1 112345688999983 3444444332 2
Q ss_pred CcEEEEecccCC----eeeEEeecC------CCCEEEEEeecCCCEEEEEeC-------------CCeEEEEEccCCCc-
Q 019847 123 KSIINHDVRVSN----NVTSCIKAH------SGEVCGLKWSNEGNLLASGGD-------------DNVVRIWERSKMSS- 178 (335)
Q Consensus 123 g~i~~~d~~~~~----~~~~~~~~~------~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~- 178 (335)
..|..+++.... .....+... ...-..++|.|||.++++.+. .|.|.-++....-.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 356666664321 111111111 112357999999976665433 24676666542100
Q ss_pred ----------ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce----------------------
Q 019847 179 ----------SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC---------------------- 226 (335)
Q Consensus 179 ----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~---------------------- 226 (335)
...+.. .++ .....++|+|....++++-.+ .++.=.|.-+..+..
T Consensus 178 ~npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d~g-~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNEHG-PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TCTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEEEC-SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEecC-CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 011111 122 236789999944456665432 221112222222111
Q ss_pred ---------EEEeecCCcEeEEEeCC-------CCceeeeeeeeeeecCCCeEEEEECCCCceeec---ccCCCCceeEe
Q 019847 227 ---------IHGIDAKAQICGLEWNR-------HHKEILSGHGFSASGDGNKLCLWKYPNMTKVGE---LQSSNSRILDL 287 (335)
Q Consensus 227 ---------~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~---~~~~~~~i~~~ 287 (335)
+..+..+.....+.+.. ++.++++. -..+.|...++..++.... +......+..+
T Consensus 255 ~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v 328 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGA------LKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDV 328 (353)
T ss_dssp SSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEE------TTTTEEEEEEEETTEEEEEEEESGGGCCCEEEE
T ss_pred CCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEE------ccCCEEEEEEeCCCeEeeeEEcccCCCCceeEE
Confidence 11122223445556543 23333332 4567777777765543322 22223478999
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEecC
Q 019847 288 SQSPDGLTVATAG-ADETIRFWEAF 311 (335)
Q Consensus 288 ~~~~~~~~l~~~~-~dg~v~iw~~~ 311 (335)
++.|||.++++.. .+| +||.+.
T Consensus 329 ~~~pdG~lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 329 RTGPDGYLYVLTDESSG--ELLKVS 351 (353)
T ss_dssp EECTTSCEEEEECSTTE--EEEEEE
T ss_pred EECCCCcEEEEEeCCCC--EEEEEe
Confidence 9999998666543 344 555553
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.00 E-value=0.0036 Score=50.06 Aligned_cols=182 Identities=16% Similarity=0.175 Sum_probs=94.6
Q ss_pred CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC-----CcEEEEeCCCce---eE--eeecccccceeE
Q 019847 36 PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD-----SKLQLWDAETSK---LV--RNLEGHHRRVAT 105 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~---~~--~~~~~~~~~v~~ 105 (335)
..+.+||..+.+......++........+. .+++.++.|+.+ ..+.+||..+.+ .. ..+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 478999998887655444333222222222 366777777754 468999988765 32 222211122222
Q ss_pred eeecCCCCCEEEEeeCCC-----cEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCC-----CeEEEEEccC
Q 019847 106 SSWNHWNGHILTSGSKDK-----SIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDD-----NVVRIWERSK 175 (335)
Q Consensus 106 ~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 175 (335)
+.. ++.+++.|+.++ .+.+||+.+..............-.+++. .++++++.|+.+ ..+.+||+.+
T Consensus 109 ~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 109 TTL---GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEE---TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE---CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCC
Confidence 222 677888887543 57888887554321111111111111222 266777777654 3588899765
Q ss_pred CCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCC---CCeEEEEECCCCceE
Q 019847 176 MSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRE---DGCIKIWNVQKGTCI 227 (335)
Q Consensus 176 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~---d~~i~i~d~~~~~~~ 227 (335)
. ....+..+.........+.+ + ..+++.|+... ...+.+||+++.+-.
T Consensus 185 ~-~W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 185 G-HWTNVTPMATKRSGAGVALL--N-DHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp T-EEEEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred C-cEEeCCCCCcccccceEEEE--C-CEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 3 22333222211112222222 2 35777764111 246899999877544
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.95 E-value=0.0046 Score=49.51 Aligned_cols=180 Identities=13% Similarity=0.212 Sum_probs=92.6
Q ss_pred CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC-----CcEEEEeCCCceeEee--ecccccceeEeee
Q 019847 36 PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD-----SKLQLWDAETSKLVRN--LEGHHRRVATSSW 108 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~ 108 (335)
..+..||..+.+......++.....-..+.+ +++.++.|+.+ ..+.+||..+.+-... +.........+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE
Confidence 4688999988876555444332222222222 66777777754 3588999887654332 2211112222222
Q ss_pred cCCCCCEEEEeeCCC-----cEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCC-------CeEEEEEccCC
Q 019847 109 NHWNGHILTSGSKDK-----SIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDD-------NVVRIWERSKM 176 (335)
Q Consensus 109 ~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~ 176 (335)
++.+++.|+.++ .+.+||+.+..............-.+++. -++++++.|+.+ ..+.+||+.+.
T Consensus 108 ---~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 ---NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp ---TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred ---CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 677888887654 57788877544211110011111112222 256677776543 35888997653
Q ss_pred CcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC-----CeEEEEECCCCceE
Q 019847 177 SSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED-----GCIKIWNVQKGTCI 227 (335)
Q Consensus 177 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d-----~~i~i~d~~~~~~~ 227 (335)
. ...+..+.........+.+ + ..+++.|+ .+ ..+.+||+++.+-.
T Consensus 184 ~-W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG--~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 184 E-WTYIAEMSTRRSGAGVGVL--N-NLLYAVGG--HDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp E-EEEECCCSSCCBSCEEEEE--T-TEEEEECC--BSSSSBCCCEEEEETTTTEEE
T ss_pred c-EEECCCCccccccccEEEE--C-CEEEEECC--CCCCcccceEEEEeCCCCCEe
Confidence 2 2223222211112222222 2 35777764 32 46899999876543
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.93 E-value=0.0049 Score=49.31 Aligned_cols=231 Identities=11% Similarity=0.097 Sum_probs=109.9
Q ss_pred CCEEEEEECC----CcEEEEeCCCceeEee--ecccccceeEeeecCCCCCEEEEeeCCC-----cEEEEecccCCeeeE
Q 019847 70 AKTLAVGYMD----SKLQLWDAETSKLVRN--LEGHHRRVATSSWNHWNGHILTSGSKDK-----SIINHDVRVSNNVTS 138 (335)
Q Consensus 70 ~~~l~~~~~d----g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~ 138 (335)
+..++.|+.+ ..+..||+.+.+.... +......-..+.. ++.+++.|+.++ .+.+||..+......
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 3455555533 3588889887654322 1111111112222 677888887553 578888875542111
Q ss_pred E-eecCCCCEEEEEeecCCCEEEEEeCCC-----eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCC
Q 019847 139 C-IKAHSGEVCGLKWSNEGNLLASGGDDN-----VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRE 212 (335)
Q Consensus 139 ~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~ 212 (335)
. +.........+. -++++++.|+.++ .+.+||+.+.. ...+..+.........+.+ ++ .+++.|+...
T Consensus 93 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~ 166 (302)
T 2xn4_A 93 ANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNE-WFHVAPMNTRRSSVGVGVV--GG-LLYAVGGYDV 166 (302)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TT-EEEEECCEET
T ss_pred CCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCe-EeecCCCCCcccCceEEEE--CC-EEEEEeCCCC
Confidence 1 111111111222 2567777777653 57788876532 2223222221122222222 33 5777664111
Q ss_pred -----CCeEEEEECCCCceEEEeecCC--cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCcee--ecccCCCCc
Q 019847 213 -----DGCIKIWNVQKGTCIHGIDAKA--QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKV--GELQSSNSR 283 (335)
Q Consensus 213 -----d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~--~~~~~~~~~ 283 (335)
-..+.+||+.+.+-...-..+. .-.++.. -+++.++.|.. ........+.+||..+.+-. ..+......
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~ 244 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV-LNNLLYAVGGH-DGPLVRKSVEVYDPTTNAWRQVADMNMCRRN 244 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCB-SSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCccccEEEEEeCCCCcEEECCCCccccccccEEE-ECCEEEEECCC-CCCcccceEEEEeCCCCCEeeCCCCCCcccc
Confidence 2458899998775433222111 1112222 24455444411 00011357889998775432 222211111
Q ss_pred eeEeEEcCCCCEEEEEeCCC-----cEEEEecCCC
Q 019847 284 ILDLSQSPDGLTVATAGADE-----TIRFWEAFGP 313 (335)
Q Consensus 284 i~~~~~~~~~~~l~~~~~dg-----~v~iw~~~~~ 313 (335)
...+ .-++++++.|+.++ .+.+||+...
T Consensus 245 ~~~~--~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 245 AGVC--AVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp CEEE--EETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CeEE--EECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 1122 23677778887654 4888888764
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.91 E-value=0.0033 Score=50.54 Aligned_cols=179 Identities=18% Similarity=0.170 Sum_probs=93.0
Q ss_pred CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC----C-----CcEEEEeCCCceeEee--eccccccee
Q 019847 36 PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM----D-----SKLQLWDAETSKLVRN--LEGHHRRVA 104 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iw~~~~~~~~~~--~~~~~~~v~ 104 (335)
..+.+||..+.+......++.....-..+. .+++.++.|+. + ..+.+||..+.+.... +........
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 116 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG 116 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE--ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccE
Confidence 478999998887665543332222222222 26667777765 2 4688999887654332 221111222
Q ss_pred EeeecCCCCCEEEEeeCC-----CcEEEEecccCCeeeE-EeecCCCCEEEEEeecCCCEEEEEeCC-----CeEEEEEc
Q 019847 105 TSSWNHWNGHILTSGSKD-----KSIINHDVRVSNNVTS-CIKAHSGEVCGLKWSNEGNLLASGGDD-----NVVRIWER 173 (335)
Q Consensus 105 ~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~ 173 (335)
.+.+ ++.+++.|+.+ ..+.+||+.+...... .+......-..+.+ ++++++.|+.+ ..+.+||+
T Consensus 117 ~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 117 VGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYP 191 (308)
T ss_dssp EEEE---TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEET
T ss_pred EEEE---CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeC
Confidence 2222 67778877754 3578888875442111 11111111122222 56777777654 45888887
Q ss_pred cCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC-----CeEEEEECCCCceE
Q 019847 174 SKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED-----GCIKIWNVQKGTCI 227 (335)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d-----~~i~i~d~~~~~~~ 227 (335)
.+.. ...+..+.........+.+ + ..+++.|+ .+ ..+.+||+.+.+-.
T Consensus 192 ~~~~-W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG--~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 192 ERNE-WRMITAMNTIRSGAGVCVL--H-NCIYAAGG--YDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp TTTE-EEECCCCSSCCBSCEEEEE--T-TEEEEECC--BCSSSBCCCEEEEETTTTEEE
T ss_pred CCCe-EeeCCCCCCccccceEEEE--C-CEEEEEeC--CCCCCccceEEEEeCCCCcEE
Confidence 6532 2222222211122222333 3 35777764 32 56899999876543
No 316
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.87 E-value=0.0072 Score=49.66 Aligned_cols=92 Identities=20% Similarity=0.262 Sum_probs=49.5
Q ss_pred CCceEEEe--cCCeEEEEEecC--CceeeEEeec-CCCCCceEEEEcCCCCEEEEEEC-C---------CcEEEEeCCCc
Q 019847 26 RNNVLAVA--LGPVLFLWKWEN--GKVKKLLQVP-GEDDYPTSVSWSHDAKTLAVGYM-D---------SKLQLWDAETS 90 (335)
Q Consensus 26 ~~~~~~~~--~~~~i~vw~~~~--~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iw~~~~~ 90 (335)
++.+++.+ ....+.+||..+ .+......++ .....-..+.+ +++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 55555544 345789999874 5554443333 11222222222 5667777765 2 46899999877
Q ss_pred eeEeeeccc---ccceeEeeecCCCCCEEEEeeCC
Q 019847 91 KLVRNLEGH---HRRVATSSWNHWNGHILTSGSKD 122 (335)
Q Consensus 91 ~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~d 122 (335)
+-...-... .....++. . ++.+++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~-~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--H-NGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--E-TTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--E-CCEEEEEeCcC
Confidence 543322111 11122222 2 77888888865
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.80 E-value=0.0084 Score=47.80 Aligned_cols=197 Identities=18% Similarity=0.205 Sum_probs=122.1
Q ss_pred cC-CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC-ceeEeeecccc--
Q 019847 25 GR-NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET-SKLVRNLEGHH-- 100 (335)
Q Consensus 25 ~~-~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~-- 100 (335)
+| ..++|.-....+.++|+++.+..+...+. ..|.-=.|-.+. .|+..+ +..|+-|+++. ..+.+.+..|.
T Consensus 75 nP~~~ViALrag~~LQiFnletK~klks~~~~---e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 75 NPASKVIALKAGKTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp CSSSSEEEEEETTEEEEEETTTTEEEEEEECS---SCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGG
T ss_pred CCCccEEEEecCCeEEEechHHhhhhcceecC---CccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhc
Confidence 44 35666666889999999999877777663 467777776444 455554 45899999974 35555565443
Q ss_pred --cceeEeeecCCCCCEEEEee-------CCCcEEEEecccCCeeeEEeecCCCCEEEEEeecC---CCEEEEEeC---C
Q 019847 101 --RRVATSSWNHWNGHILTSGS-------KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE---GNLLASGGD---D 165 (335)
Q Consensus 101 --~~v~~~~~~~~~~~~l~~~~-------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~---d 165 (335)
..|..-..++ +.+.++..+ -.|.+.+|..+. ...+.+.+|-..-..+....+ .++++.+.. .
T Consensus 150 ~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 150 AGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp TTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred ccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 4566666677 666554433 236788999863 346667777655444433211 124444433 2
Q ss_pred CeEEEEEccCCC-cccc-----eeecc---CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec
Q 019847 166 NVVRIWERSKMS-SSKS-----LHRFT---DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA 232 (335)
Q Consensus 166 g~i~iwd~~~~~-~~~~-----~~~~~---~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~ 232 (335)
+++++-++.... .... ...+. ...+-..++..++.-..++... .-|.+++||++++.++..-+-
T Consensus 227 ~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviT---K~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEe---CCcEEEEEEcccCcEEEEecc
Confidence 589999985431 1111 11111 1233455677777665555544 789999999999999876654
No 318
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.79 E-value=0.0089 Score=47.90 Aligned_cols=230 Identities=11% Similarity=0.079 Sum_probs=112.8
Q ss_pred CEEEEEEC--CCcEEEEeCCCceeEee--ecccccceeEeeecCCCCCEEEEeeCC----CcEEEEecccCCeeeEE-ee
Q 019847 71 KTLAVGYM--DSKLQLWDAETSKLVRN--LEGHHRRVATSSWNHWNGHILTSGSKD----KSIINHDVRVSNNVTSC-IK 141 (335)
Q Consensus 71 ~~l~~~~~--dg~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~-~~ 141 (335)
.+++.|+. ...+.+||..+.+-... +.........+.. ++.+++.|+.+ ..+.+||+.+....... +.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 34555654 35789999988754332 2211112222222 67788888765 56888898765432111 11
Q ss_pred cCCCCEEEEEeecCCCEEEEEeCC------CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCC---
Q 019847 142 AHSGEVCGLKWSNEGNLLASGGDD------NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRE--- 212 (335)
Q Consensus 142 ~~~~~i~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~--- 212 (335)
........+. -++++++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++ .+++.|+...
T Consensus 90 ~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 90 TPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTES-WHTKPSMLTQRCSHGMVEA--NG-LIYVCGGSLGNNV 163 (306)
T ss_dssp SCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TT-EEEEECCEESCTT
T ss_pred ccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCc-eEeCCCCcCCcceeEEEEE--CC-EEEEECCCCCCCC
Confidence 1111112222 266777777765 458889977532 2222222211111222222 33 5666664111
Q ss_pred ----CCeEEEEECCCCceEEEeecCC--cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce--eecccCCCCce
Q 019847 213 ----DGCIKIWNVQKGTCIHGIDAKA--QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK--VGELQSSNSRI 284 (335)
Q Consensus 213 ----d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~--~~~~~~~~~~i 284 (335)
-..+.+||+.+.+-...-.... .-.++... +++.++.|.. .....-..+.+||..+.+- +..+.......
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~ 241 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQ-NGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTV 241 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCE-ETTEEBCCEEEEETTTTEEEECCCCSCCBSCC
T ss_pred cccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCC-CCCCCCceEEEeeCCCCcEEECCCCCCCccce
Confidence 3558899998875433222111 11122222 4454444421 0001125688999877543 22222222222
Q ss_pred eEeEEcCCCCEEEEEeCC-----CcEEEEecCCC
Q 019847 285 LDLSQSPDGLTVATAGAD-----ETIRFWEAFGP 313 (335)
Q Consensus 285 ~~~~~~~~~~~l~~~~~d-----g~v~iw~~~~~ 313 (335)
..+.+ ++++++.|+.+ ..+.+||+...
T Consensus 242 ~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 242 KCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred eEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 22333 67788888754 45788887764
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.78 E-value=0.03 Score=53.52 Aligned_cols=285 Identities=8% Similarity=0.034 Sum_probs=158.1
Q ss_pred cccceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCC------CCEEEEEEC-CCcEEEEeCC
Q 019847 16 DYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHD------AKTLAVGYM-DSKLQLWDAE 88 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~-dg~i~iw~~~ 88 (335)
...+...+.++..++.+ .++.+.+++++.++.....+. .-...|.|+++.|. ++++++|.. |++++|+++.
T Consensus 513 ~~~I~~As~n~~~vvva-~g~~l~~fel~~~~L~~~~~~-~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 513 AKNISVASCNSSQVVVA-VGRALYYLQIHPQELRQISHT-EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCCCCEEEECSSEEEEE-ETTEEEEEEEETTEEEEEEEE-ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEEeCCCEEEEE-ECCEEEEEEeeCCceeeeccc-CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 34555666666655555 478898899887765443332 23567999999863 469999996 9999999998
Q ss_pred CceeEeeecc-cccceeEeeecC-CCCCEEEEeeCCCcEEEEecccCC-eee---EEeecCCCCEEEEEeecCCCEEEEE
Q 019847 89 TSKLVRNLEG-HHRRVATSSWNH-WNGHILTSGSKDKSIINHDVRVSN-NVT---SCIKAHSGEVCGLKWSNEGNLLASG 162 (335)
Q Consensus 89 ~~~~~~~~~~-~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~-~~~---~~~~~~~~~i~~~~~~~~~~~l~~~ 162 (335)
+.+.+....- ......++.... ....+|..|-.||.+.-+.+.... .+. ....+ ..++.-..+...+..-+.+
T Consensus 591 ~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a 669 (1158)
T 3ei3_A 591 SFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFA 669 (1158)
T ss_dssp TCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEE
T ss_pred CCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEE
Confidence 7665543221 112333333321 144678899999998766654311 111 11222 3344444444333333333
Q ss_pred eCCCeEEEEEccCCCcccceeeccCCCCCee-EEEecCCC--CcEEEEecCCCCCeEEEEECCCC--ceEEEeecCCcEe
Q 019847 163 GDDNVVRIWERSKMSSSKSLHRFTDHCGGVK-ALAWSPHQ--VNVLATGGGREDGCIKIWNVQKG--TCIHGIDAKAQIC 237 (335)
Q Consensus 163 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~--~~~~~~~~g~~d~~i~i~d~~~~--~~~~~~~~~~~~~ 237 (335)
..+.-..++.-+. .-.+..+. ...+. ...|+... ..++++ .++.++|..+.+. -.+++++....+.
T Consensus 670 ~s~rp~liy~~~~---~l~~s~l~--~~~v~~~~~F~se~~~~g~v~~----~~~~LrI~~i~~~~~~~~~~ipL~~Tpr 740 (1158)
T 3ei3_A 670 CSDRPTVIYSSNH---KLVFSNVN--LKEVNYMCPLNSDGYPDSLALA----NNSTLTIGTIDEIQKLHIRTVPLYESPR 740 (1158)
T ss_dssp ESSSCEEEEESSS---SEEEEEBS--SSCCCEEEEECCSSSTTEEEEE----CSSCEEEEEECCSSSEEEEEEECSSEEE
T ss_pred ECCCCEEEEEcCC---ceEEeccC--hHHhceEeccCcccCCCcEEEE----cCCceEEEEecccCCeeEEEEeCCCCce
Confidence 3344444444221 11112111 12232 33343321 124443 3566998887543 3355666677888
Q ss_pred EEEeCCCCceeeeeeeee-eec------------------------------------------CCCeEEEEECCCCcee
Q 019847 238 GLEWNRHHKEILSGHGFS-ASG------------------------------------------DGNKLCLWKYPNMTKV 274 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~-~~~------------------------------------------~~~~i~i~d~~~~~~~ 274 (335)
.++++|..+.++.+..-. ... ..+.|++.|..+.+.+
T Consensus 741 ri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i 820 (1158)
T 3ei3_A 741 KICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVL 820 (1158)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEE
T ss_pred EEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEE
Confidence 888888877655442100 000 1245788888888776
Q ss_pred ecccCC-CCceeEeE---EcCC-CCEEEEEe----------CCCcEEEEecCC
Q 019847 275 GELQSS-NSRILDLS---QSPD-GLTVATAG----------ADETIRFWEAFG 312 (335)
Q Consensus 275 ~~~~~~-~~~i~~~~---~~~~-~~~l~~~~----------~dg~v~iw~~~~ 312 (335)
..+.-. ...+.+++ |..+ ..+|++|+ ..|.|++|++.+
T Consensus 821 ~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~ 873 (1158)
T 3ei3_A 821 HAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSD 873 (1158)
T ss_dssp EEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEET
T ss_pred EEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEEC
Confidence 554422 23344444 4333 46888886 358899999873
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.72 E-value=0.012 Score=48.72 Aligned_cols=150 Identities=11% Similarity=0.136 Sum_probs=95.3
Q ss_pred EEcCCCCEEEEEECCCcEEEEeCCCceeEeeeccc----ccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe-----
Q 019847 65 SWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGH----HRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN----- 135 (335)
Q Consensus 65 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----- 135 (335)
..+.+|..++++- ++.||.-++......+.++.. -..+..+..+| +|++|+..+ +..|.+..+..+..
T Consensus 27 ~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp EEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCH
T ss_pred EEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECC-CCCEEEEec-CCeEEEEEecCccccCccc
Confidence 3445666666664 567888887754444444432 23678899999 999998876 45788888763210
Q ss_pred ------eeEEeec------CCCCEEEEEeec---CCCEEEEEeCCCeEEEEEccCCCcccce--------eeccCCCCCe
Q 019847 136 ------VTSCIKA------HSGEVCGLKWSN---EGNLLASGGDDNVVRIWERSKMSSSKSL--------HRFTDHCGGV 192 (335)
Q Consensus 136 ------~~~~~~~------~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~--------~~~~~~~~~v 192 (335)
..+.+.- ...+|..+.|+| .+..|++-..|+.|++||+..... .+. .........|
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~-~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQE-KPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTS-CCEEESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCC-CCcchhccccccCCCcccceE
Confidence 0111111 257899999999 467899999999999999986221 111 1112233568
Q ss_pred eEEEecCCCCcEEEEecCCCCCeEEEE
Q 019847 193 KALAWSPHQVNVLATGGGREDGCIKIW 219 (335)
Q Consensus 193 ~~~~~~~~~~~~~~~~~g~~d~~i~i~ 219 (335)
.+++|.+++-.|.+.. .+..|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~-~t~~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLN-TTEGGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEE-CTTSCEEEEE
T ss_pred EEEEEcCCCcEEEEEe-cCCCCCEEEE
Confidence 8899988765555533 1145666654
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.70 E-value=0.013 Score=47.17 Aligned_cols=186 Identities=10% Similarity=0.085 Sum_probs=97.0
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC----C-------CcEEEEeCCCceeEee--
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM----D-------SKLQLWDAETSKLVRN-- 95 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-------g~i~iw~~~~~~~~~~-- 95 (335)
++..+. ..+..||..+++... ..++.........+...+++.++.|+. + ..+..||..+.+-...
T Consensus 7 l~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC-CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 444443 789999999988654 444332233344444567888888873 1 1277889887754322
Q ss_pred ecccccceeEeeecCCCCCEEEEeeCC--------CcEEEEecccCCeeeE-EeecCCCCEEEEEeecCCCEEEEEeC-C
Q 019847 96 LEGHHRRVATSSWNHWNGHILTSGSKD--------KSIINHDVRVSNNVTS-CIKAHSGEVCGLKWSNEGNLLASGGD-D 165 (335)
Q Consensus 96 ~~~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~-d 165 (335)
+.........+.+ ++.+++.|+.+ ..+.+||+.+..-... .+...... .+++ ..++++++.|+. +
T Consensus 85 ~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~iyv~GG~~~ 159 (315)
T 4asc_A 85 LPSPRCLFGLGEA---LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVL-SHMDLVYVIGGKGS 159 (315)
T ss_dssp BSSCEESCEEEEE---TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEECCBCT
T ss_pred CCcchhceeEEEE---CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEE-EECCEEEEEeCCCC
Confidence 1111111112222 66777777743 4588899876532111 11111111 1122 235677777775 2
Q ss_pred -----CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC-----eEEEEECCCCceE
Q 019847 166 -----NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG-----CIKIWNVQKGTCI 227 (335)
Q Consensus 166 -----g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~-----~i~i~d~~~~~~~ 227 (335)
..+.+||+.+.. ...+..+.........+.+ ++ .+++.|+ .++ .+.+||+.+.+-.
T Consensus 160 ~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG--~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVH--DG-RIIVAAG--VTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp TSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--TT-EEEEEEE--ECSSSEEEEEEEEETTTTEEE
T ss_pred CCcccceEEEEeCCCCe-EEECCCCCCchhceEEEEE--CC-EEEEEec--cCCCCccceEEEEECCCCeEE
Confidence 368889977532 2222222211111222222 33 5777764 332 5888999877543
No 322
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.63 E-value=0.018 Score=47.00 Aligned_cols=173 Identities=13% Similarity=0.078 Sum_probs=100.5
Q ss_pred CCCcEEEEecccCCeeeE--Eeec-----CCCCEEEEEeec--CCC--EEEEEeC--CCeEEEEEccCCCc-ccceeecc
Q 019847 121 KDKSIINHDVRVSNNVTS--CIKA-----HSGEVCGLKWSN--EGN--LLASGGD--DNVVRIWERSKMSS-SKSLHRFT 186 (335)
Q Consensus 121 ~dg~i~~~d~~~~~~~~~--~~~~-----~~~~i~~~~~~~--~~~--~l~~~~~--dg~i~iwd~~~~~~-~~~~~~~~ 186 (335)
.+|.|.++|+.+...... .+.+ .......+.+.+ ++. ++++-.. +..|.+|++..... ...+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999874321111 1222 123567777766 343 3444333 46788888765322 22233333
Q ss_pred CC-CCCeeEEEecCCCCcEEEEecC---------------CCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeee
Q 019847 187 DH-CGGVKALAWSPHQVNVLATGGG---------------REDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILS 250 (335)
Q Consensus 187 ~~-~~~v~~~~~~~~~~~~~~~~~g---------------~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (335)
+. -...+.+.+.++|. ++++... ...|.+..+|. ++.......-...+.++|+|+++.++.
T Consensus 161 g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEE
Confidence 32 23478999999985 4443210 01245666654 333333334456789999999998876
Q ss_pred eeeeeeecCCCeEEEEECCC-Cce--eecccCCCCceeEeEEcC-CCCEEEEEeCC
Q 019847 251 GHGFSASGDGNKLCLWKYPN-MTK--VGELQSSNSRILDLSQSP-DGLTVATAGAD 302 (335)
Q Consensus 251 ~~~~~~~~~~~~i~i~d~~~-~~~--~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d 302 (335)
+. +..+.|..|++.. ++. ...+ ...+..-.+++.+ +|++.+++..+
T Consensus 238 ad-----t~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 238 AE-----LLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EE-----GGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred Ee-----CCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 53 4578999999863 322 1223 2245567889999 59887766543
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.61 E-value=0.017 Score=46.30 Aligned_cols=180 Identities=11% Similarity=0.041 Sum_probs=93.0
Q ss_pred CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC-----CcEEEEeCCCceeEee--ecccccceeEeee
Q 019847 36 PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD-----SKLQLWDAETSKLVRN--LEGHHRRVATSSW 108 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~ 108 (335)
..+.+||..+.+......++........+.+ +++.++.|+.+ ..+.+||..+.+-... +......-..+.+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 167 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL 167 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE
Confidence 4688999988876555444332222233333 67777777643 4688999887654332 2211112222222
Q ss_pred cCCCCCEEEEeeCC-----CcEEEEecccCCeeeEE-eecCCCCEEEEEeecCCCEEEEEeCC-----CeEEEEEccCCC
Q 019847 109 NHWNGHILTSGSKD-----KSIINHDVRVSNNVTSC-IKAHSGEVCGLKWSNEGNLLASGGDD-----NVVRIWERSKMS 177 (335)
Q Consensus 109 ~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~ 177 (335)
++.+++.|+.+ ..+..||+.+..-.... +.........+.+ ++++++.|+.+ ..+.+||+.+..
T Consensus 168 ---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 ---NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp ---TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ---CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 67788888765 45888998755421110 1111111122222 66777777654 468899987532
Q ss_pred cccceeeccCCCCCeeEEEecCCCCcEEEEecCC---CCCeEEEEECCCCce
Q 019847 178 SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGR---EDGCIKIWNVQKGTC 226 (335)
Q Consensus 178 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~---~d~~i~i~d~~~~~~ 226 (335)
...+..+.........+.+ + ..+++.|+.. .-..+.+||+++.+-
T Consensus 243 -W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 243 -WTFVAPMKHRRSALGITVH--Q-GRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp -EEECCCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred -EEECCCCCCCccceEEEEE--C-CEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 2223222211112222222 3 3577776411 124578888877654
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.52 E-value=0.042 Score=49.64 Aligned_cols=187 Identities=14% Similarity=0.128 Sum_probs=99.7
Q ss_pred CeEEEEEecCCceeeEE-e-----ecCCCCCceEEEEcC-CCCEEEEEECC------CcEEEEeCCCceeEee--ecccc
Q 019847 36 PVLFLWKWENGKVKKLL-Q-----VPGEDDYPTSVSWSH-DAKTLAVGYMD------SKLQLWDAETSKLVRN--LEGHH 100 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~-~-----~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iw~~~~~~~~~~--~~~~~ 100 (335)
+.+.+||..+++..... . ++..... .+++..+ +++.++.|+.+ ..+.+||..+.+-... +....
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 46899999988876554 2 1211122 2333333 77777887743 3588999887654332 22111
Q ss_pred cceeEeeecCCCCCEEEEeeCCC--cEEEEecccCCeeeEE----eecCCCCEEEEEeecC-CCEEEEEeC--C-----C
Q 019847 101 RRVATSSWNHWNGHILTSGSKDK--SIINHDVRVSNNVTSC----IKAHSGEVCGLKWSNE-GNLLASGGD--D-----N 166 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~----~~~~~~~i~~~~~~~~-~~~l~~~~~--d-----g 166 (335)
.. .+++... ++.+++.|+.++ .+.+||..+....... .........++.+..+ +++++.|+. + .
T Consensus 491 ~~-h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~ 568 (695)
T 2zwa_A 491 FR-HSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSD 568 (695)
T ss_dssp BS-CEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCC
T ss_pred cc-ceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeC
Confidence 11 2222223 778888888665 6899998765432111 1111122233455554 667777765 2 4
Q ss_pred eEEEEEccCCCc-----ccceeecc-CCCCCeeEEEecCCCCcEEEEecCC------CCCeEEEEECCCCceE
Q 019847 167 VVRIWERSKMSS-----SKSLHRFT-DHCGGVKALAWSPHQVNVLATGGGR------EDGCIKIWNVQKGTCI 227 (335)
Q Consensus 167 ~i~iwd~~~~~~-----~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~g~------~d~~i~i~d~~~~~~~ 227 (335)
.+.+||+.+..- ...+.... ....... ++...++ .+++.|+.. ....+.+||+.+.+-.
T Consensus 569 ~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~-~~~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 569 KAIIFKYDAENATEPITVIKKLQHPLFQRYGSQ-IKYITPR-KLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEEEECTTCSSCCEEEEEEEECGGGCCBSCE-EEEEETT-EEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred cEEEEEccCCccccceEEEEcCCCCCCCcccce-EEEeCCC-EEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 688999886541 22222211 1111122 2233323 577776411 2356999999887654
No 325
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.48 E-value=0.031 Score=45.90 Aligned_cols=202 Identities=12% Similarity=0.057 Sum_probs=105.9
Q ss_pred cceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEe---ecCCCCEEEEEeecC---CCEEEEEeC----C----C
Q 019847 101 RRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCI---KAHSGEVCGLKWSNE---GNLLASGGD----D----N 166 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~~---~~~l~~~~~----d----g 166 (335)
.....++|.| ++++++ +..+|.|++++.. +......+ .........|+++|+ +..|.++.. + .
T Consensus 29 ~~P~~ia~~p-dG~l~V-~e~~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLV-TERPGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEE-EETTTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEE-EeCCCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4577899999 777544 5666999998742 32112111 122356889999997 455554443 3 5
Q ss_pred eEEEEEccCCC----cccce-eecc-CCCCCeeEEEecCCCCcEEEEecC-----------CCCCeEEEEECCCC-----
Q 019847 167 VVRIWERSKMS----SSKSL-HRFT-DHCGGVKALAWSPHQVNVLATGGG-----------REDGCIKIWNVQKG----- 224 (335)
Q Consensus 167 ~i~iwd~~~~~----~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~~~~g-----------~~d~~i~i~d~~~~----- 224 (335)
.|..|+..... ..+.+ ..+. ........+.|.|+|. |+++.+. ...|.|.-++....
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 67777765431 01111 1121 1112346799999995 5554320 01256666665421
Q ss_pred ---c-eEEEeecCCcEeEEEeCC-CCceeeeeeeeeeecCC--CeEEEEECCC----------------CceeecccCCC
Q 019847 225 ---T-CIHGIDAKAQICGLEWNR-HHKEILSGHGFSASGDG--NKLCLWKYPN----------------MTKVGELQSSN 281 (335)
Q Consensus 225 ---~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~i~i~d~~~----------------~~~~~~~~~~~ 281 (335)
. .+.. ........++|+| ++...++-. +.+ ..|.+..... ..++..+....
T Consensus 185 pf~~~~i~a-~G~rnp~Gla~d~~~g~l~v~d~-----g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ 258 (354)
T 3a9g_A 185 PFPNSPIWS-YGHRNPQGIDWHRASGVMVATEH-----GPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSET 258 (354)
T ss_dssp SSTTCCEEE-ECCSCCCEEEECTTTCCEEEEEC-----CSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred CCCCCcEEE-EccCCcceEEEeCCCCCEEEEec-----CCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCC
Confidence 0 1111 1233466899999 555444321 111 2233332110 01222221112
Q ss_pred CceeEeEEc-------CCCCEEEEEeCCCcEEEEecCC
Q 019847 282 SRILDLSQS-------PDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 282 ~~i~~~~~~-------~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
.....++|. .+|.++++.-..+.|...++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD 296 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC
Confidence 346778883 5677777666677788887764
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.42 E-value=0.04 Score=45.87 Aligned_cols=229 Identities=17% Similarity=0.155 Sum_probs=137.4
Q ss_pred ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC-ceeEeeecccc----cc
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET-SKLVRNLEGHH----RR 102 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~----~~ 102 (335)
.+++.-.+..+.++|+++.+..+...+. ..|.-=.|-.+. .|+..+ +..|+-|+++. ..+++.+..|. ..
T Consensus 78 ~iiALrag~~lQiFnle~K~klks~~~~---e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~Q 152 (494)
T 1bpo_A 78 KVIALKAGKTLQIFNIEMKSKMKAHTMT---DDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQ 152 (494)
T ss_dssp SCEEEEETTEEEEEETTTTEEEEEEECS---SCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCE
T ss_pred cEEEEecCCeEEEEchHHhhhhcceecC---CCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccce
Confidence 5666667899999999998877777653 346666675443 455554 55899999974 34555565443 45
Q ss_pred eeEeeecCCCCCEEEEee-------CCCcEEEEecccCCeeeEEeecCCCCEEEEEeecC---CCEEEEEeCC---CeEE
Q 019847 103 VATSSWNHWNGHILTSGS-------KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE---GNLLASGGDD---NVVR 169 (335)
Q Consensus 103 v~~~~~~~~~~~~l~~~~-------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d---g~i~ 169 (335)
|..-..++ +.+.++..+ -.|.+.+|..+.. ..+.+.+|-.....+....+ .++++.+... +++.
T Consensus 153 IInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLh 229 (494)
T 1bpo_A 153 IINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (494)
T ss_dssp EEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEE
T ss_pred EEEEEECC-CCCeEEEEeecccCCcccceEEEeecccc--ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEE
Confidence 66666777 666655433 2478889998643 46667777665555444321 1245555443 7899
Q ss_pred EEEccCCC-cccc-----eeecc---CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecC-CcEeEE
Q 019847 170 IWERSKMS-SSKS-----LHRFT---DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAK-AQICGL 239 (335)
Q Consensus 170 iwd~~~~~-~~~~-----~~~~~---~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~ 239 (335)
+-++.... .... ...+. ...+-..++..++.-..++... .-|.+.+||++++.++..-+-. .++..-
T Consensus 230 i~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviT---K~G~i~lyDleTgt~i~~nrIs~~~iF~t 306 (494)
T 1bpo_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNRISGETIFVT 306 (494)
T ss_dssp EEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEe---cCceEEEEecccceeeeeecccCCceEEe
Confidence 99986531 1111 11111 1234456777777766555554 7899999999999998766542 334333
Q ss_pred EeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 240 EWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
+.+....-++.. ...|.|.--.++..+.
T Consensus 307 ~~~~~~~Gi~~V------nr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 307 APHEATAGIIGV------NRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEETTTTEEEEE------ETTCEEEEEEECTTTH
T ss_pred cccCCCCcEEEE------ccCceEEEEEEccccc
Confidence 333332222222 3456665555554433
No 327
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.40 E-value=0.025 Score=45.48 Aligned_cols=176 Identities=10% Similarity=0.073 Sum_probs=89.2
Q ss_pred EEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC--------CcEEEEeCCCceeEee--ecccccceeEee
Q 019847 38 LFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD--------SKLQLWDAETSKLVRN--LEGHHRRVATSS 107 (335)
Q Consensus 38 i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iw~~~~~~~~~~--~~~~~~~v~~~~ 107 (335)
+.+||..+.+......++.....-..+.+ +++.++.|+.+ ..+.+||..+.+-... +.........+.
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 146 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS 146 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE
Confidence 78888888876554333322112222222 56667777632 4689999987654322 221111122222
Q ss_pred ecCCCCCEEEEeeC-C-----CcEEEEecccCCeeeEE-eecCCCCEEEEEeecCCCEEEEEeCCC-----eEEEEEccC
Q 019847 108 WNHWNGHILTSGSK-D-----KSIINHDVRVSNNVTSC-IKAHSGEVCGLKWSNEGNLLASGGDDN-----VVRIWERSK 175 (335)
Q Consensus 108 ~~~~~~~~l~~~~~-d-----g~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~ 175 (335)
+ ++.+++.|+. + ..+.+||+.+..-.... +......-..+. -++++++.|+.++ .+.+||+.+
T Consensus 147 ~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 147 H---MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp E---TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred E---CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCC
Confidence 2 6778888876 2 46888998765421111 111111112222 2667888887654 578888765
Q ss_pred CCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC--------------CeEEEEECCCCce
Q 019847 176 MSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED--------------GCIKIWNVQKGTC 226 (335)
Q Consensus 176 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d--------------~~i~i~d~~~~~~ 226 (335)
. ....+..+.........+.+ ++ .+++.|+ .+ ..+.+||+++.+-
T Consensus 222 ~-~W~~~~~~p~~r~~~~~~~~--~~-~l~v~GG--~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 222 N-KWAPFEAFPQERSSLSLVSL--VG-TLYAIGG--FATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp T-EEEEECCCSSCCBSCEEEEE--TT-EEEEEEE--EEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred C-eEEECCCCCCcccceeEEEE--CC-EEEEECC--ccccCcCCccccccccCcEEEecCCCChh
Confidence 3 23333322211222222222 33 5666664 32 2467788776644
No 328
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.39 E-value=0.038 Score=44.96 Aligned_cols=232 Identities=13% Similarity=0.119 Sum_probs=119.3
Q ss_pred CCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee--Eeee----cccccceeEeeecCC---CCCEEEEee--CCCcEE
Q 019847 58 DDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL--VRNL----EGHHRRVATSSWNHW---NGHILTSGS--KDKSII 126 (335)
Q Consensus 58 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~~l~~~~--~dg~i~ 126 (335)
-.....++|.|+|.++++--..|.|++++..+++. +..+ .........++++|. ++.+.++-+ .++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 45578999999998776665589999998765543 2222 123467889999983 244444322 345566
Q ss_pred EEecccC----------CeeeEEee-cCCCCEEEEEeecCCCEEEEEeC-------------CCeEEEEEccCCCc----
Q 019847 127 NHDVRVS----------NNVTSCIK-AHSGEVCGLKWSNEGNLLASGGD-------------DNVVRIWERSKMSS---- 178 (335)
Q Consensus 127 ~~d~~~~----------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~~---- 178 (335)
-|.+... +.+...+. .....-..|.|.|||.++++.+. .|.|.-.+....-.
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665431 11111121 11123456999999987777542 34555555432100
Q ss_pred --ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCce------------------EEEeecC-CcEe
Q 019847 179 --SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTC------------------IHGIDAK-AQIC 237 (335)
Q Consensus 179 --~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~------------------~~~~~~~-~~~~ 237 (335)
...+.. .+|. ....++|+|++. ++++-.| .|+.=.|--++.+.. +..+... ....
T Consensus 191 f~~~~i~a-~G~R-Np~Gla~dp~G~-L~~~d~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 191 FPGSPVYS-YGHR-NVQGLAWDDKQR-LFASEFG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp STTCCEEE-BCCS-BCCEEEECTTCC-EEEEECC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCeEEe-eCCC-CcceEEECCCCC-EEEEecC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 011111 2333 346789999864 5555322 333222222222211 1111111 1233
Q ss_pred EEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce----eecccCCCCceeEeEEcCCCCEEEEEe
Q 019847 238 GLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK----VGELQSSNSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~~~~ 300 (335)
.++|.. +.. |.+.-..+.|....+..... ...+.+..+++.+++..|||.++++-+
T Consensus 267 G~~~~~-g~~------~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 267 GIAYAE-GSV------WMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEET-TEE------EEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceEEEc-Cce------eeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 444432 222 22234455666666554332 222334456799999999997666543
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.38 E-value=0.052 Score=46.22 Aligned_cols=105 Identities=10% Similarity=0.116 Sum_probs=61.0
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee--Eeeecc------cccceeEeeecCC--CCCEEEEee-C------
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL--VRNLEG------HHRRVATSSWNHW--NGHILTSGS-K------ 121 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~------~~~~v~~~~~~~~--~~~~l~~~~-~------ 121 (335)
.....++|.|+|+++++-...+.|++++..+++. +..+.. .......++|+|. .+..|+.+. .
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3468999999998666654334798888655543 222221 2456779999983 044444433 2
Q ss_pred ------CCcEEEEecccCC-------eeeEEee-cCCCCEEEEEeecCCCEEEEEe
Q 019847 122 ------DKSIINHDVRVSN-------NVTSCIK-AHSGEVCGLKWSNEGNLLASGG 163 (335)
Q Consensus 122 ------dg~i~~~d~~~~~-------~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~ 163 (335)
...|.-++..... .+...+. ........|+|.|||.++++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2355556554221 1111121 1123478999999998777755
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.016 Score=46.96 Aligned_cols=203 Identities=9% Similarity=0.002 Sum_probs=106.0
Q ss_pred CceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEc--CCCCEEEEE--ECCCcEEEEeCCCceeEeeecccccc
Q 019847 27 NNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWS--HDAKTLAVG--YMDSKLQLWDAETSKLVRNLEGHHRR 102 (335)
Q Consensus 27 ~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~~~ 102 (335)
+.+++++.||.|+-.|.++|+.+-.+... ...++....-. +.+..++.+ +.||.|..++.++|.....+... ..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~-~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR-QL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH-HH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc-cc
Confidence 46788889999999999999876655443 11222221100 112234444 58999999999988655443321 11
Q ss_pred ee--Eeeec--C--------CCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCC------EEEEEee-----cCCCEE
Q 019847 103 VA--TSSWN--H--------WNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGE------VCGLKWS-----NEGNLL 159 (335)
Q Consensus 103 v~--~~~~~--~--------~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~------i~~~~~~-----~~~~~l 159 (335)
+. -+... | ..+..+++|+.+|.+...|+++++.+...-.+.... ..|.... ..+..+
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 10 01110 0 045688999999999999999888755432221111 1111110 123567
Q ss_pred EEEeCCCeEEEEEccCCCcccc-eeeccCCCCC--ee-EEEecCCCCcEEEEecCCCCCeEEEEECCCCceEE-EeecCC
Q 019847 160 ASGGDDNVVRIWERSKMSSSKS-LHRFTDHCGG--VK-ALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIH-GIDAKA 234 (335)
Q Consensus 160 ~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~--v~-~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~-~~~~~~ 234 (335)
+.+..+..+.+.+ +++..... .......... +. .-..+.++.. ++.. .||.|..+|..+|+.+. ..+...
T Consensus 169 ~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~---~dg~v~A~d~~~G~~~W~~~~l~s 243 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPF---RDKSLLASDLDFRIARWVSPTFPG 243 (339)
T ss_dssp EEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEE---TTTEEEEECSTTCCEEEECCCCSS
T ss_pred EEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE-EEEC---CCCEEEEEECCCCcEEEEeecCCC
Confidence 7777676666665 22211110 0111110000 00 0001223444 3433 69999999999888876 444444
Q ss_pred cE
Q 019847 235 QI 236 (335)
Q Consensus 235 ~~ 236 (335)
++
T Consensus 244 Pv 245 (339)
T 2be1_A 244 II 245 (339)
T ss_dssp CE
T ss_pred Ce
Confidence 43
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.19 E-value=0.061 Score=43.26 Aligned_cols=228 Identities=15% Similarity=0.121 Sum_probs=103.9
Q ss_pred EEEEEECCCcEEEEeCCCceeEee-ecc-cccceeEeeecCCCCCEEEEeeC----CC-------cEEEEecccCCeeeE
Q 019847 72 TLAVGYMDSKLQLWDAETSKLVRN-LEG-HHRRVATSSWNHWNGHILTSGSK----DK-------SIINHDVRVSNNVTS 138 (335)
Q Consensus 72 ~l~~~~~dg~i~iw~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~l~~~~~----dg-------~i~~~d~~~~~~~~~ 138 (335)
.++.|+. .+..||..+.+-... +.. ....-.+++ .. ++.+++.|+. ++ .+..||..+......
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CS-SSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EE-CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 3444442 488999988765431 111 111112222 23 6788888873 12 167788765432111
Q ss_pred -EeecCCCCEEEEEeecCCCEEEEEeCC-------CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecC
Q 019847 139 -CIKAHSGEVCGLKWSNEGNLLASGGDD-------NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGG 210 (335)
Q Consensus 139 -~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g 210 (335)
.+........ ++. -++++++.|+.+ ..+.+||+.+.. ...+..+....... +++. .++ .+++.|+.
T Consensus 94 ~~~p~~r~~~~-~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~-~~~~-~~~-~iyv~GG~ 167 (318)
T 2woz_A 94 PPLPSARCLFG-LGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAK-WSEVKNLPIKVYGH-NVIS-HNG-MIYCLGGK 167 (318)
T ss_dssp SCBSSCBCSCE-EEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTE-EEEECCCSSCEESC-EEEE-ETT-EEEEECCE
T ss_pred CCCCccccccc-eEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCC-EeECCCCCCccccc-EEEE-ECC-EEEEEcCC
Confidence 0111111111 222 256777777754 247788876532 22222211111111 2222 233 57776641
Q ss_pred C----CCCeEEEEECCCCceEEEeecCC--cEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCcee--ecccCCCC
Q 019847 211 R----EDGCIKIWNVQKGTCIHGIDAKA--QICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKV--GELQSSNS 282 (335)
Q Consensus 211 ~----~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~--~~~~~~~~ 282 (335)
. .-..+.+||+.+.+-...-.... .-.+++. -+++.++.|.. ........+.+||..+.+-. ..+.....
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 245 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGKIVIAGGV-TEDGLSASVEAFDLKTNKWEVMTEFPQERS 245 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEE-ETTEEEEEEEEEETTTCCEEECCCCSSCCB
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCEEEEEcCc-CCCCccceEEEEECCCCeEEECCCCCCccc
Confidence 1 12458999998875433222111 1112222 24455554421 00011246778998775432 22222111
Q ss_pred ceeEeEEcCCCCEEEEEeCC--------------CcEEEEecCCC
Q 019847 283 RILDLSQSPDGLTVATAGAD--------------ETIRFWEAFGP 313 (335)
Q Consensus 283 ~i~~~~~~~~~~~l~~~~~d--------------g~v~iw~~~~~ 313 (335)
....+ .-++++++.|+.+ ..+.+||+...
T Consensus 246 ~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 246 SISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp SCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred ceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 11222 2356677777754 34777787664
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.031 Score=45.30 Aligned_cols=108 Identities=8% Similarity=-0.012 Sum_probs=65.6
Q ss_pred CEEEEEECCCcEEEEeCCCceeEeeecccc-cceeEeeec--CCCCCEEEEe-eCCCcEEEEecccCCeeeEEeec---C
Q 019847 71 KTLAVGYMDSKLQLWDAETSKLVRNLEGHH-RRVATSSWN--HWNGHILTSG-SKDKSIINHDVRVSNNVTSCIKA---H 143 (335)
Q Consensus 71 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~--~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~---~ 143 (335)
..+++++.||.|.-+|.++|+....++... .++....-. +.++..++.. +.||.+..++..++......-.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478899999999999999999998887541 222222111 1122344443 68999999998765432211110 1
Q ss_pred CCCEEE---EEe-----ecCCCEEEEEeCCCeEEEEEccCCCc
Q 019847 144 SGEVCG---LKW-----SNEGNLLASGGDDNVVRIWERSKMSS 178 (335)
Q Consensus 144 ~~~i~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~ 178 (335)
..++.. ... ...+..+++|+.+|.+.-.|+++++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 222221 000 01355788899999999999887543
No 333
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.10 E-value=0.012 Score=44.06 Aligned_cols=104 Identities=11% Similarity=0.031 Sum_probs=65.6
Q ss_pred CCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccc--------eeEeeecCCCCCEEEEeeCCCcEEEEec
Q 019847 59 DYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRR--------VATSSWNHWNGHILTSGSKDKSIINHDV 130 (335)
Q Consensus 59 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~~l~~~~~dg~i~~~d~ 130 (335)
..+..++|+|+|.+.++ .+|.+.-.+..+.+...-+. .... -.++.|.| ++.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~-~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDP-NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECT-TSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cccEecccccccceEEEECC-CCCEEEe--CCCEEEEeCC
Confidence 46789999999986666 67877777765422111111 1122 47788888 8887777 5699988876
Q ss_pred ccCCeee-----EEe-ecCCCCEEEEEeecCCCEEEEEeCCCeEEE
Q 019847 131 RVSNNVT-----SCI-KAHSGEVCGLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 131 ~~~~~~~-----~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 170 (335)
.+..... ..+ ..-=..+..|.+.|+|.+.++. |+.++-
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 4332210 111 1111467999999999888776 777543
No 334
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.04 E-value=0.24 Score=47.41 Aligned_cols=249 Identities=10% Similarity=0.002 Sum_probs=132.6
Q ss_pred CCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeee-cccccceeEeeecCCC-
Q 019847 35 GPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNL-EGHHRRVATSSWNHWN- 112 (335)
Q Consensus 35 ~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~- 112 (335)
...|++.+.+..........+ ....|...+.+ +.+++.++ .+.+.++++..+++.... ..-...|.|+++.|..
T Consensus 491 ~~~Irli~~~~~~~~~~w~~p-~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~ 566 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKEP-QAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGD 566 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECCT-TCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSS
T ss_pred cCEEEEEECCCCeEEEEEECC-CCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCC
Confidence 345777776554443333322 23457777664 34676665 678888887765432211 1235689999987622
Q ss_pred ----CCEEEEeeC-CCcEEEEecccCCeeeEEeecCCCCEEEEEeec--CCCEEEEEeCCCeEEEEEccC--CCccccee
Q 019847 113 ----GHILTSGSK-DKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSN--EGNLLASGGDDNVVRIWERSK--MSSSKSLH 183 (335)
Q Consensus 113 ----~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~ 183 (335)
.++++.|.. |++++++++...+.+.....+......++.+.. ...+|..|-.||.+.-+.+.. +.......
T Consensus 567 ~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~ 646 (1158)
T 3ei3_A 567 SNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKK 646 (1158)
T ss_dssp STTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEE
T ss_pred CcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCcccccee
Confidence 478999997 999999999865543322222223455555543 345788999999987766543 11111111
Q ss_pred eccCCCCCeeEEEecCCCC-cEEEEecCCCCCeEEEEECCCCceE-EEeecCCcEeEEEeCCCC--ceeeeeeeeeeecC
Q 019847 184 RFTDHCGGVKALAWSPHQV-NVLATGGGREDGCIKIWNVQKGTCI-HGIDAKAQICGLEWNRHH--KEILSGHGFSASGD 259 (335)
Q Consensus 184 ~~~~~~~~v~~~~~~~~~~-~~~~~~~g~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 259 (335)
.+.+ ..++.-..+...+. .+++++ +....++.-+ ++.. ..+....--....|+... .-++. ..
T Consensus 647 ~~LG-~~pv~L~~~~~~~~~~V~a~s----~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~g~v~-------~~ 713 (1158)
T 3ei3_A 647 VTLG-TQPTVLRTFRSLSTTNVFACS----DRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPDSLAL-------AN 713 (1158)
T ss_dssp EECC-SSCCEEEEEESSSCEEEEEES----SSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTTEEEE-------EC
T ss_pred EEcC-CCceEEEEEeeCCceeEEEEC----CCCEEEEEcC-CceEEeccChHHhceEeccCcccCCCcEEE-------Ec
Confidence 2222 33444444433333 344443 4545555433 3322 222222111223343321 11221 22
Q ss_pred CCeEEEEECCCCcee--ecccCCCCceeEeEEcCCCCEEEEEeC
Q 019847 260 GNKLCLWKYPNMTKV--GELQSSNSRILDLSQSPDGLTVATAGA 301 (335)
Q Consensus 260 ~~~i~i~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~ 301 (335)
++.++|..+.+.+.. .++. -...+..++++|+.+.++.+..
T Consensus 714 ~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~ 756 (1158)
T 3ei3_A 714 NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSS 756 (1158)
T ss_dssp SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEE
T ss_pred CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEE
Confidence 566888887654322 2222 2346789999998877766553
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.01 E-value=0.094 Score=42.15 Aligned_cols=188 Identities=16% Similarity=0.152 Sum_probs=94.6
Q ss_pred ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEEC----CC-------cEEEEeCCCceeEee-
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYM----DS-------KLQLWDAETSKLVRN- 95 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iw~~~~~~~~~~- 95 (335)
.+++.+. ..+..||..+++... ..++.............++..++.|+. ++ .+.+||..+.+-...
T Consensus 17 ~i~~~GG-~~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVND-TAAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECS-SEEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhccc-cceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 458999999888755 333322222333444567788888873 12 177888877654332
Q ss_pred -ecccccceeEeeecCCCCCEEEEeeCC-------CcEEEEecccCCeeeEEeecCCCCEE--EEEeecCCCEEEEEeCC
Q 019847 96 -LEGHHRRVATSSWNHWNGHILTSGSKD-------KSIINHDVRVSNNVTSCIKAHSGEVC--GLKWSNEGNLLASGGDD 165 (335)
Q Consensus 96 -~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~i~--~~~~~~~~~~l~~~~~d 165 (335)
+.........+.+ ++.+++.|+.+ ..+.+||+.+..-.. ......+.. +++ ..++++++.|+.+
T Consensus 95 ~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~--~~~~p~~r~~~~~~-~~~~~iyv~GG~~ 168 (318)
T 2woz_A 95 PLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE--VKNLPIKVYGHNVI-SHNGMIYCLGGKT 168 (318)
T ss_dssp CBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE--ECCCSSCEESCEEE-EETTEEEEECCEE
T ss_pred CCCccccccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCCEeE--CCCCCCcccccEEE-EECCEEEEEcCCC
Confidence 1111111122222 67788888754 257788887544211 111111111 112 2466777777642
Q ss_pred ------CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCC---CeEEEEECCCCceE
Q 019847 166 ------NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED---GCIKIWNVQKGTCI 227 (335)
Q Consensus 166 ------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d---~~i~i~d~~~~~~~ 227 (335)
..+.+||+.+.. ...+............+.+ ++ .+++.|+...+ ..+.+||+.+.+-.
T Consensus 169 ~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 169 DDKKCTNRVFIYNPKKGD-WKDLAPMKTPRSMFGVAIH--KG-KIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp SSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEE--TT-EEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred CCCCccceEEEEcCCCCE-EEECCCCCCCcccceEEEE--CC-EEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 358899977532 2333222211111222222 33 56666641111 35778998876543
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.01 E-value=0.092 Score=41.93 Aligned_cols=214 Identities=8% Similarity=0.019 Sum_probs=112.7
Q ss_pred cCCCCEEEEEE--CCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeC-C-------------CcEEEEec
Q 019847 67 SHDAKTLAVGY--MDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSK-D-------------KSIINHDV 130 (335)
Q Consensus 67 ~~~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d-------------g~i~~~d~ 130 (335)
++++..+.... .++.|...+.+... ...+... .+. -+++ +++.|+-+.. + ..|+..++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~--~~~--~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND--TAM--YINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE--EEE--EEEE-CSSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC--cee--eEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 34666666654 24556666654332 3333321 222 2345 5555555443 2 35666676
Q ss_pred ccCCeeeEEeecCCCCEEEEEeecCCCEEEEEe--CCC--eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEE
Q 019847 131 RVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGG--DDN--VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLA 206 (335)
Q Consensus 131 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 206 (335)
...+ ...+... . ...|+++++.|+-.. .++ .|+.-++... . ...+..+.. ..++|+++.++.
T Consensus 96 dg~~--~~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~---~~~lt~~~~----~~~~~~g~~iy~ 161 (302)
T 3s25_A 96 NGHG--STVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE-E---KKKIKNHYL----FTCNTSDRYFYY 161 (302)
T ss_dssp TSCC--CEEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC-C---CEEEESSCC----CCSEEETTEEEE
T ss_pred CCCc--ceEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC-C---eEEEeCCCc----eEeeEECCEEEE
Confidence 6443 2222222 2 236778888888776 344 4555555432 1 222222322 346788888888
Q ss_pred EecCCCCCeEEEEECCCCceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeE
Q 019847 207 TGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILD 286 (335)
Q Consensus 207 ~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 286 (335)
+.. ....|...++..+.....++ .... ..+.|++.+++-... .....|..-++...... .+.. ..+
T Consensus 162 t~~--g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~----~~~~~I~~~~ldG~~~~-~Lt~--~~~-- 227 (302)
T 3s25_A 162 NNP--KNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDV----NRDNAIVHVNINNPNPV-VLTE--ANI-- 227 (302)
T ss_dssp ECT--TTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEG----GGTTEEEEECSSSCCCE-ECSC--SCE--
T ss_pred EeC--CCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEc----CCCcEEEEEECCCCCeE-EEeC--CCc--
Confidence 763 46789999987665443333 2222 235588888865421 22356777777655432 2222 223
Q ss_pred eEEcCCCCEEEEEeC--CCcEEEEecCCCC
Q 019847 287 LSQSPDGLTVATAGA--DETIRFWEAFGPS 314 (335)
Q Consensus 287 ~~~~~~~~~l~~~~~--dg~v~iw~~~~~~ 314 (335)
..|+|++.+|.-++. .+.|..-++++..
T Consensus 228 ~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~ 257 (302)
T 3s25_A 228 EHYNVYGSLIFYQRGGDNPALCVVKNDGTG 257 (302)
T ss_dssp EEEEEETTEEEEEECSSSCEEEEEETTSCC
T ss_pred ceEEECCCEEEEEECCCCcEEEEEECCCCc
Confidence 347778877776532 3455555555543
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.93 E-value=0.23 Score=45.35 Aligned_cols=269 Identities=10% Similarity=0.076 Sum_probs=149.1
Q ss_pred cceeeeecC-CceEEEecCCeEEEEEecCCceeeEEeecCC----CCCceEEEEcCCCCEEEEEECCCcEEEEeCCCcee
Q 019847 18 YSKVIDWGR-NNVLAVALGPVLFLWKWENGKVKKLLQVPGE----DDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKL 92 (335)
Q Consensus 18 ~~~~~~~~~-~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 92 (335)
.+.++.-.. +.+.+++. +.+..++..+++.... ..+.. ...|.++...+++..|..|+. +-+..+|..+++.
T Consensus 147 ~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 147 TIYSIIRTKDNQIYVGTY-NGLCRYIPSNGKFEGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp CEEEEEECTTCCEEEEET-TEEEEEETTTTEEEEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred eEEEEEEcCCCCEEEEeC-CCHhhCccCCCceEEe-cCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 345555553 55666554 5688888777654322 22211 234788888777776666664 4588899877654
Q ss_pred EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEee-------cCCCCEEEEEeecCCCEEEEEeCC
Q 019847 93 VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIK-------AHSGEVCGLKWSNEGNLLASGGDD 165 (335)
Q Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~~~~~~~l~~~~~d 165 (335)
..........|.++...+ ++.+. .|+.+ -+.+++..+... ..... -....|.++....+|. |..|+..
T Consensus 224 ~~~~~l~~~~i~~i~~d~-~g~lW-igT~~-Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~ 298 (758)
T 3ott_A 224 KQTEAFHNNSIKSLALDG-NGDLL-AGTDN-GLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDY 298 (758)
T ss_dssp EEEEEEEEEEEEEEEECT-TCCEE-EEETT-EEEEECCTTSCC-EEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESS
T ss_pred EeccCCCCCeEEEEEEcC-CCCEE-EEeCC-ceeEEecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCC
Confidence 322222234577777765 55544 45544 577888764332 21111 1224588888777776 4455556
Q ss_pred CeEEEEEccCCCcccceee--c--cCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCc--eEEEee--------
Q 019847 166 NVVRIWERSKMSSSKSLHR--F--TDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGT--CIHGID-------- 231 (335)
Q Consensus 166 g~i~iwd~~~~~~~~~~~~--~--~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~--~~~~~~-------- 231 (335)
| +.++.... ....... . ......|.++.-.++|...+.+ .+ -+..++..+++ ....+.
T Consensus 299 G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt----~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l 370 (758)
T 3ott_A 299 G-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG----AN-GLIRFTDPAGERHDAIWYRMGDKTYPL 370 (758)
T ss_dssp S-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE----TT-EEEEESCTTSSCCCCEEECTTCSSSCC
T ss_pred c-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee----CC-cceeecccccccceeEEeccCCcCCCC
Confidence 6 54443211 1111110 0 1123468888888887544432 34 46667655432 122222
Q ss_pred cCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecc--cC----CCCceeEeEEcCCCCEEEEEeCCCcE
Q 019847 232 AKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGEL--QS----SNSRILDLSQSPDGLTVATAGADETI 305 (335)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~--~~----~~~~i~~~~~~~~~~~l~~~~~dg~v 305 (335)
....|.++.-.++|...+. + ++.+..||..+++...-. .. ....|.++...++|++. .|+..+-+
T Consensus 371 ~~~~v~~i~~d~~g~lWig-------t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl 441 (758)
T 3ott_A 371 SHNRIRHIYEDKEQQLWIA-------T-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLW-ISTCLGGI 441 (758)
T ss_dssp SCSCEEEEEECTTSCEEEE-------E-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEE-EEESSSCE
T ss_pred CCCceEEEEECCCCCEEEE-------e-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEE-EEECCCce
Confidence 1235788888887775543 2 567899998776543211 11 22357888888877644 46665667
Q ss_pred EEEecC
Q 019847 306 RFWEAF 311 (335)
Q Consensus 306 ~iw~~~ 311 (335)
..++..
T Consensus 442 ~~~~~~ 447 (758)
T 3ott_A 442 FVVDKH 447 (758)
T ss_dssp EEEEHH
T ss_pred EEEccc
Confidence 777754
No 338
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.92 E-value=0.12 Score=49.85 Aligned_cols=193 Identities=19% Similarity=0.209 Sum_probs=114.5
Q ss_pred ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCC-ceeEeeeccc----ccc
Q 019847 28 NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAET-SKLVRNLEGH----HRR 102 (335)
Q Consensus 28 ~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~----~~~ 102 (335)
.+++.-.+.++.|+|+++.+..+...+ ...|.-=.|-.+. .|+..+ +..|.-|++.. ..+++.+..| ...
T Consensus 78 ~iiALrag~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~Q 152 (1630)
T 1xi4_A 78 KVIALKAGKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQ 152 (1630)
T ss_pred ceEEEecCCeEEEeehHHhhhhccccc---CCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCe
Confidence 566666788999999998876665554 3456666675444 444443 45799999974 3444445444 345
Q ss_pred eeEeeecCCCCCEEEEee-------CCCcEEEEecccCCeeeEEeecCCCCEEEEEee--c-CCCEEEEEeC---CCeEE
Q 019847 103 VATSSWNHWNGHILTSGS-------KDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWS--N-EGNLLASGGD---DNVVR 169 (335)
Q Consensus 103 v~~~~~~~~~~~~l~~~~-------~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~--~-~~~~l~~~~~---dg~i~ 169 (335)
|..-..++ +.+.++..+ -.|.+.+|..+.. ..+.+.+|-+....+... + ....++.+.. .+.+.
T Consensus 153 IinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~--~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLh 229 (1630)
T 1xi4_A 153 IINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLH 229 (1630)
T ss_pred eEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccc--cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEE
Confidence 66666777 566555332 3578899988643 345566666554444432 1 1223333332 36899
Q ss_pred EEEccCCCccc-ce-----eeccC---CCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee
Q 019847 170 IWERSKMSSSK-SL-----HRFTD---HCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID 231 (335)
Q Consensus 170 iwd~~~~~~~~-~~-----~~~~~---~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~ 231 (335)
|-++....... .. ..+.. ..+-..++..++.-..++... .-|.+.+||+.++.++..-+
T Consensus 230 i~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it---k~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 230 IIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe---cCceEEEEecccchhhhhcc
Confidence 99886531111 11 11111 123344666676655455444 78999999999998875544
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.72 E-value=0.29 Score=44.20 Aligned_cols=203 Identities=12% Similarity=0.090 Sum_probs=101.8
Q ss_pred CCCCEEEEEECC----CcEEEEeCCCceeEeee-c-------ccccceeEeeecCCCCCEEEEeeCCC------cEEEEe
Q 019847 68 HDAKTLAVGYMD----SKLQLWDAETSKLVRNL-E-------GHHRRVATSSWNHWNGHILTSGSKDK------SIINHD 129 (335)
Q Consensus 68 ~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~-~-------~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~~~d 129 (335)
.++..++.|+.+ ..+.+||..+++....- . .....-..+.+.. ++.+++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEe
Confidence 467777777753 46888998876543322 1 1111222233322 566777777543 578888
Q ss_pred cccCCeeeE-EeecCCCCEEEEEeecCCCEEEEEeCCC--eEEEEEccCCCcccceee---ccCCCCCeeEEEecCCCCc
Q 019847 130 VRVSNNVTS-CIKAHSGEVCGLKWSNEGNLLASGGDDN--VVRIWERSKMSSSKSLHR---FTDHCGGVKALAWSPHQVN 203 (335)
Q Consensus 130 ~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~ 203 (335)
..+...... .+...... .+++...++++++.|+.++ .+.+||+.+.. ...+.. .........++.+..+...
T Consensus 475 ~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp TTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTE-EEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred CCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCc-eEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 876432111 01111111 1222224778888887655 68999977532 222221 1112222334556655346
Q ss_pred EEEEecCCCC-----CeEEEEECCCCce-----EEEeec---CC-cEeEEEeCCCCceeeeeeeeeee--cCCCeEEEEE
Q 019847 204 VLATGGGRED-----GCIKIWNVQKGTC-----IHGIDA---KA-QICGLEWNRHHKEILSGHGFSAS--GDGNKLCLWK 267 (335)
Q Consensus 204 ~~~~~~g~~d-----~~i~i~d~~~~~~-----~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~i~d 267 (335)
+++.|+...+ ..+.+||+.+.+- -..+.. .. .-.++....+++.++.|..-... .....+.+||
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 7777752112 4689999988761 111111 11 11122223325555544210000 1246799999
Q ss_pred CCCCce
Q 019847 268 YPNMTK 273 (335)
Q Consensus 268 ~~~~~~ 273 (335)
..+.+-
T Consensus 633 ~~t~~W 638 (695)
T 2zwa_A 633 PLSETL 638 (695)
T ss_dssp TTTTEE
T ss_pred CCCCeE
Confidence 887654
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.71 E-value=0.35 Score=44.19 Aligned_cols=266 Identities=12% Similarity=0.093 Sum_probs=143.6
Q ss_pred ccceeeeecCC-ceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEee
Q 019847 17 YYSKVIDWGRN-NVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRN 95 (335)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 95 (335)
-.+.++.-..+ .+.+++ ++.+..||..+.+.... .......|.++.. .++ .|..++.+ -+..+|..+++....
T Consensus 63 ~~i~~i~~d~~g~lWigT-~~Gl~~yd~~~~~f~~~--~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 63 TRIYCGVIIDNTYLYMGT-DNGILVYNYRADRYEQP--ETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSF 136 (758)
T ss_dssp SCEEEEEEETTTEEEEEE-TTEEEEEETTTTEECCC--SCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEE
T ss_pred ceEEEEEEcCCCcEEEEe-CCCeEEEeCCCCEEECc--ccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEe
Confidence 34566655554 455555 45688999887654331 1112335776654 344 56667666 588899876654322
Q ss_pred ec----ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE-eec----CCCCEEEEEeecCCCEEEEEeCCC
Q 019847 96 LE----GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC-IKA----HSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 96 ~~----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~----~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
.. .....|.++...+ ++.+.+ |+.+ -+..++..+... ... ... ....|.++...+++..|..|+. +
T Consensus 137 ~~~~~~l~~~~i~~i~~d~-~g~lWi-gt~~-Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~ 211 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTK-DNQIYV-GTYN-GLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-G 211 (758)
T ss_dssp CHHHHCCSCSCEEEEEECT-TCCEEE-EETT-EEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-E
T ss_pred ccCCCCcCCCeEEEEEEcC-CCCEEE-EeCC-CHhhCccCCCce-EEecCCCccccccceeEEEEEECCCCEEEEEEC-C
Confidence 01 1124577777665 555544 5554 477777654331 111 111 1224888887777776666664 4
Q ss_pred eEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee--------cCCcEeE
Q 019847 167 VVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID--------AKAQICG 238 (335)
Q Consensus 167 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~--------~~~~~~~ 238 (335)
-+..+|..+... .....+ ....|.++...+++...+.+ ++-+.+++..+++...... ....|.+
T Consensus 212 Gl~~~~~~~~~~-~~~~~l--~~~~i~~i~~d~~g~lWigT-----~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 283 (758)
T 3ott_A 212 YLFQYFPSTGQI-KQTEAF--HNNSIKSLALDGNGDLLAGT-----DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWN 283 (758)
T ss_dssp EEEEEETTTTEE-EEEEEE--EEEEEEEEEECTTCCEEEEE-----TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEE
T ss_pred CCeEEcCCCCeE-EeccCC--CCCeEEEEEEcCCCCEEEEe-----CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEE
Confidence 588888654221 111111 12357888888887544443 3458888877655432211 1235788
Q ss_pred EEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecc---c--CCCCceeEeEEcCCCCEEEEEeCCCcEEEEecC
Q 019847 239 LEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGEL---Q--SSNSRILDLSQSPDGLTVATAGADETIRFWEAF 311 (335)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~---~--~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~ 311 (335)
+..+.+|...+.. ..| +.++.....-..... . .....|.++.-.++|.+.+ |+.+| +..++..
T Consensus 284 i~~D~~g~lWiGT-------~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~ 351 (758)
T 3ott_A 284 IFADQEHNIWLGT-------DYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDP 351 (758)
T ss_dssp EEECTTCCEEEEE-------SSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCT
T ss_pred EEEcCCCCEEEEe-------CCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeeccc
Confidence 8888887755432 244 444432211111110 0 1234588888888887555 44555 4455543
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.61 E-value=0.22 Score=40.67 Aligned_cols=188 Identities=13% Similarity=0.095 Sum_probs=90.5
Q ss_pred CeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC------------------------------------
Q 019847 36 PVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD------------------------------------ 79 (335)
Q Consensus 36 ~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------------------------------ 79 (335)
+.+.+||..+.+......+.. .......+...+++.++.|+.+
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p-~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAP-MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDY 164 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCS-SCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGG
T ss_pred ccEEEEeCCCCcEEECCCCCC-cccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccccccc
Confidence 468999998887655443331 1111121222577788888754
Q ss_pred ---CcEEEEeCCCceeEee--ecccccceeEeeecCCCCCEEEEeeC------CCcEEEEecccCCeeeEEeecC--C-C
Q 019847 80 ---SKLQLWDAETSKLVRN--LEGHHRRVATSSWNHWNGHILTSGSK------DKSIINHDVRVSNNVTSCIKAH--S-G 145 (335)
Q Consensus 80 ---g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~--~-~ 145 (335)
..+.+||..+.+-... +......-.++... ++.+++.|+. ...+..||+......-..+... . .
T Consensus 165 ~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~ 242 (357)
T 2uvk_A 165 FFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG 242 (357)
T ss_dssp CCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC
T ss_pred CCcccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc
Confidence 4789999987654332 22111111222222 6777777764 3457778762121111211111 1 1
Q ss_pred CEEEEEeecCCCEEEEEeCC----------------------CeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCc
Q 019847 146 EVCGLKWSNEGNLLASGGDD----------------------NVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVN 203 (335)
Q Consensus 146 ~i~~~~~~~~~~~l~~~~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 203 (335)
.....+...++++++.|+.+ ..+.+||+.+. ....+..+........++.+ ++ .
T Consensus 243 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~~~~~~~--~~-~ 318 (357)
T 2uvk_A 243 VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG-KWDKSGELSQGRAYGVSLPW--NN-S 318 (357)
T ss_dssp CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC----CEEEEECSSCCBSSEEEEE--TT-E
T ss_pred cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC-ceeeCCCCCCCcccceeEEe--CC-E
Confidence 11111222356777777632 24778887753 33444433322222223322 33 5
Q ss_pred EEEEecCCCC----CeEEEEECCCCceEEEe
Q 019847 204 VLATGGGRED----GCIKIWNVQKGTCIHGI 230 (335)
Q Consensus 204 ~~~~~~g~~d----~~i~i~d~~~~~~~~~~ 230 (335)
+++.|+.+.+ ..+.++++++++.+...
T Consensus 319 i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 319 LLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred EEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 6666651122 24666688877765443
No 342
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.59 E-value=0.2 Score=39.96 Aligned_cols=251 Identities=12% Similarity=0.043 Sum_probs=131.5
Q ss_pred eeecCCceEEEe--cCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECC--------------CcEEEE
Q 019847 22 IDWGRNNVLAVA--LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMD--------------SKLQLW 85 (335)
Q Consensus 22 ~~~~~~~~~~~~--~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iw 85 (335)
++..++.++... .++.|+..+.+.....++.. . .+--+++++++|...... ..|+..
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~-----~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i 93 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN-----D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRI 93 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEE-----E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccC-----C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEE
Confidence 334445544443 24566666655554333322 1 234568899998877643 367777
Q ss_pred eCCCceeEeeecccccceeEeeecCCCCCEEEEee--CCC--cEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEE
Q 019847 86 DAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGS--KDK--SIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLAS 161 (335)
Q Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 161 (335)
++...+... +... . ...+++ +++.|+-.. .++ .|...++.... .+.+..+.. .+++++++.|..
T Consensus 94 ~~dg~~~~~-l~~~--~--~~~~s~-~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~ 161 (302)
T 3s25_A 94 KRNGHGSTV-LDPD--P--CIYASL-IGNYIYYLHYDTQTATSLYRIRIDGEE--KKKIKNHYL----FTCNTSDRYFYY 161 (302)
T ss_dssp ETTSCCCEE-EECS--C--EEEEEE-ETTEEEEEEESSSSCEEEEEEETTSCC--CEEEESSCC----CCSEEETTEEEE
T ss_pred eCCCCcceE-eecC--C--ccEEEE-eCCEEEEEeecCCCCceEEEEECCCCC--eEEEeCCCc----eEeeEECCEEEE
Confidence 777654332 2211 1 225666 666666554 344 45555554222 333433432 456788888887
Q ss_pred EeC-CCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeecCCcEeEEE
Q 019847 162 GGD-DNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDAKAQICGLE 240 (335)
Q Consensus 162 ~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 240 (335)
.+. ...|..-++..... +.+ +. +... ..+.|++..++.+..+ ....|..-++..... ..+. ...+ ..
T Consensus 162 t~~g~~~Iy~~~l~g~~~-~~l--~~---~~~~-~~~~P~g~~iy~t~~~-~~~~I~~~~ldG~~~-~~Lt-~~~~--~~ 229 (302)
T 3s25_A 162 NNPKNGQLYRYDTASQSE-ALF--YD---CNCY-KPVVLDDTNVYYMDVN-RDNAIVHVNINNPNP-VVLT-EANI--EH 229 (302)
T ss_dssp ECTTTCCEEEEETTTTEE-EEE--EC---SCEE-EEEEEETTEEEEEEGG-GTTEEEEECSSSCCC-EECS-CSCE--EE
T ss_pred EeCCCceEEEEECCCCCE-EEE--eC---CCcc-ceeeecCCEEEEEEcC-CCcEEEEEECCCCCe-EEEe-CCCc--ce
Confidence 765 56777777664321 222 22 2222 3456888888877631 224677777765543 2332 2223 34
Q ss_pred eCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEEEe-CCCcEEEEecCC
Q 019847 241 WNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVATAG-ADETIRFWEAFG 312 (335)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~v~iw~~~~ 312 (335)
++|.+..+.-. .....+.|..-++........... .+.. +++.+.+|+-.. ..+.|..-++.+
T Consensus 230 ~~~~g~~Iy~~----~~~~~~~i~~~~~DG~~r~~l~~~---~~~~--i~i~~d~Iy~td~~~~~i~~~~~dG 293 (302)
T 3s25_A 230 YNVYGSLIFYQ----RGGDNPALCVVKNDGTGFKELAKG---EFCN--INVTSQYVYFTDFVSNKEYCTSTQN 293 (302)
T ss_dssp EEEETTEEEEE----ECSSSCEEEEEETTSCCCEEEEES---CEEE--EEECSSEEEEEETTTCCEEEEESSS
T ss_pred EEECCCEEEEE----ECCCCcEEEEEECCCCccEEeeCC---ccce--EEEeCCEEEEEECCCCeEEEEECCC
Confidence 77888887643 113346777777765433222222 2333 344555665554 345554444433
No 343
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.28 E-value=0.23 Score=37.25 Aligned_cols=146 Identities=15% Similarity=0.080 Sum_probs=81.3
Q ss_pred cceeeeecCC-ceEEEecCCeEEEEEecCCce------eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc
Q 019847 18 YSKVIDWGRN-NVLAVALGPVLFLWKWENGKV------KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS 90 (335)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~i~vw~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 90 (335)
.+..++++++ .+.++ .++.++-.+..+.+. ...+--.+-+. -.++.|.|+|.+.++ .||.|+-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 3457888875 56666 778766666544211 11111011111 478899999987777 5799988876432
Q ss_pred eeEe------ee-cccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe-----eeEEee-cCCCCEEEEEeecCCC
Q 019847 91 KLVR------NL-EGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN-----VTSCIK-AHSGEVCGLKWSNEGN 157 (335)
Q Consensus 91 ~~~~------~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-----~~~~~~-~~~~~i~~~~~~~~~~ 157 (335)
..-. .+ ...=..+..+.+.| ++.+.+.. |+.++-....+... ....+. ..-...+.+.|.+++.
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 1111 01 11124678999999 88877776 77754433332110 011111 2223445577889988
Q ss_pred EEEEEeCCCeEEEEEcc
Q 019847 158 LLASGGDDNVVRIWERS 174 (335)
Q Consensus 158 ~l~~~~~dg~i~iwd~~ 174 (335)
+.++. +| ++|...
T Consensus 195 l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 195 LFGVQ--GG--KFYEDY 207 (236)
T ss_dssp EEEEE--TT--EEEEES
T ss_pred EEEEe--CC--eEEecC
Confidence 77766 77 445443
No 344
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.93 E-value=0.53 Score=38.28 Aligned_cols=156 Identities=13% Similarity=0.155 Sum_probs=84.9
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee-eEEe----ecCCCCEEEEEeecC---CCEEEEE-e--
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV-TSCI----KAHSGEVCGLKWSNE---GNLLASG-G-- 163 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~~----~~~~~~i~~~~~~~~---~~~l~~~-~-- 163 (335)
.+...-...+.++|.| ++.++++--..|.|++++...+... ...+ .........|+++|+ +..|... +
T Consensus 26 ~va~gL~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 3333445678999999 8887776655899999986543321 1111 123566899999995 3444433 2
Q ss_pred CCCeEEEEEccCCC-------cccce-eecc-CCCCCeeEEEecCCCCcEEEEecC----------CCCCeEEEEECCCC
Q 019847 164 DDNVVRIWERSKMS-------SSKSL-HRFT-DHCGGVKALAWSPHQVNVLATGGG----------REDGCIKIWNVQKG 224 (335)
Q Consensus 164 ~dg~i~iwd~~~~~-------~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~~~~g----------~~d~~i~i~d~~~~ 224 (335)
.+..|.-|.+.... ..+.+ ..+. .....-..|.|.|+|..+++++.+ ...|.|.-.+....
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 34566666655421 11111 1121 112234679999999644444320 01355555554421
Q ss_pred c-------eEEEee-cCCcEeEEEeCCCCceeeee
Q 019847 225 T-------CIHGID-AKAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 225 ~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (335)
- ....+. .......++|+|+|...++-
T Consensus 185 ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 185 PAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp BCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred ccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 0 001111 23456789999987766543
No 345
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.80 E-value=0.83 Score=39.52 Aligned_cols=231 Identities=8% Similarity=0.011 Sum_probs=130.2
Q ss_pred eEEEecCCeEEEEEecCCceeeEEeecCC-----------------------CCCc--eEEEEcC---CCCEEEEEE-CC
Q 019847 29 VLAVALGPVLFLWKWENGKVKKLLQVPGE-----------------------DDYP--TSVSWSH---DAKTLAVGY-MD 79 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~~~~~~~~~~~-----------------------~~~v--~~~~~~~---~~~~l~~~~-~d 79 (335)
+.+++..|.|+|+-+.+.+....+..-.. .+.. ..+++.. ||++|+.-. .+
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 44556789999999998876554432100 0111 2334432 678888876 46
Q ss_pred CcEEEEeCCCceeEeeec-ccccceeEeeec--CCCCCEEEEeeC-------CCcEE---------E---EecccCCeee
Q 019847 80 SKLQLWDAETSKLVRNLE-GHHRRVATSSWN--HWNGHILTSGSK-------DKSII---------N---HDVRVSNNVT 137 (335)
Q Consensus 80 g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~~l~~~~~-------dg~i~---------~---~d~~~~~~~~ 137 (335)
..|...++...++-+.++ .....+..+.|. | +..+++++++ ||... + .|..+.+...
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p-~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVP-HTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSS-BCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccC-CccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 778888888877665554 244677788876 5 6667776653 23211 0 1111111111
Q ss_pred EEeecCCCCEEEEEeecCCCEEEEEeCCC---------------eEEEEEccC-------CC--ccc--ceeecc-----
Q 019847 138 SCIKAHSGEVCGLKWSNEGNLLASGGDDN---------------VVRIWERSK-------MS--SSK--SLHRFT----- 186 (335)
Q Consensus 138 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~~-------~~--~~~--~~~~~~----- 186 (335)
+... .+........+++.+.++.+.+. .+.++++.. ++ ... -+..+.
T Consensus 232 Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~ 309 (638)
T 3sbq_A 232 QVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD 309 (638)
T ss_dssp EEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred EEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence 1111 11222334456677776655331 355555321 00 000 011111
Q ss_pred ----------CCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC------c-------eEEEeecCCcEeEEEeCC
Q 019847 187 ----------DHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG------T-------CIHGIDAKAQICGLEWNR 243 (335)
Q Consensus 187 ----------~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~------~-------~~~~~~~~~~~~~~~~~~ 243 (335)
.-......+..+|||+++++++- .+.++.++|+++. + .....+..-.....+|++
T Consensus 310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GK--LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~ 387 (638)
T 3sbq_A 310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGK--LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDG 387 (638)
T ss_dssp TBCCSSEEEEEESSSCCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECS
T ss_pred ccCCceEEEEeCCCCCcceeeCCCCCEEEEcCC--CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECC
Confidence 11233456889999999998876 8999999998742 1 133444555678899999
Q ss_pred CCceeeeeeeeeeecCCCeEEEEECCC
Q 019847 244 HHKEILSGHGFSASGDGNKLCLWKYPN 270 (335)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~i~i~d~~~ 270 (335)
+|. ..+.. --|..|.-|++..
T Consensus 388 ~G~-aYTtl-----fidSqvvkWni~~ 408 (638)
T 3sbq_A 388 RGN-AYTTL-----FIDSQVVKWNMEE 408 (638)
T ss_dssp SSE-EEEEE-----TTTTEEEEEEHHH
T ss_pred CCc-eEeee-----eecceEEEEeccH
Confidence 993 33332 4599999999864
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.70 E-value=0.92 Score=39.27 Aligned_cols=231 Identities=14% Similarity=0.123 Sum_probs=131.5
Q ss_pred cccceeeeecCC----ceEEEe--cCCeEEEEEecCCceeeEEeecCCCCCceEEEEc--CCCCEEEEEEC-------CC
Q 019847 16 DYYSKVIDWGRN----NVLAVA--LGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWS--HDAKTLAVGYM-------DS 80 (335)
Q Consensus 16 ~~~~~~~~~~~~----~~~~~~--~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------dg 80 (335)
|..-..+++.++ +++... .+..|...+++.-+..+++.++. ...+..++|- |+..|+++++. ||
T Consensus 127 D~HHp~~S~tdg~yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn-~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg 205 (638)
T 3sbq_A 127 DCHHPHISMTDGKYDGKYLFINDKANSRVARIRLDIMKCDKMITVPN-VQAIHGLRLQKVPHTKYVFANAEFIIPHPNDG 205 (638)
T ss_dssp CCCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTT-CSCEEEEEECCSSBCCEEEEEECSCEESSCSS
T ss_pred CcCCCcccccCCeeeeEEEEEecCCCcceEEEECCcEeeceeEeCCC-CcCcccccccccCCccEEEecceeeccCCCCC
Confidence 333444565542 444444 45688888999988888888764 5668888886 78889988864 33
Q ss_pred cEE---------E---EeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCC---------------CcEEEEec---
Q 019847 81 KLQ---------L---WDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKD---------------KSIINHDV--- 130 (335)
Q Consensus 81 ~i~---------i---w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------------g~i~~~d~--- 130 (335)
... + .|.++.+...++.. ......+...+ ++.+.++.+.+ -.+.++|+
T Consensus 206 ~~~~~~~~~~y~~f~~iD~~tm~v~~Qv~v-~gnld~~~~~~-~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~i 283 (638)
T 3sbq_A 206 KVFDLQDENSYTMYNAIDAETMEMAFQVIV-DGNLDNTDADY-TGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAV 283 (638)
T ss_dssp SCCCTTSTTEEEEEEEEETTTCSEEEEEEE-SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHH
T ss_pred cccccCChhhceEEEEEcCCccEEEEEEEc-CCChhhcCCCC-CCCEEEEeeeccccCcChhhcCcccccEEEEecHHHH
Confidence 310 1 12222222222110 11222233334 44555544322 12444443
Q ss_pred ----------------------cc----CCeeeEEeecCCCCEEEEEeecCCCEEEEEe-CCCeEEEEEccCCCc-----
Q 019847 131 ----------------------RV----SNNVTSCIKAHSGEVCGLKWSNEGNLLASGG-DDNVVRIWERSKMSS----- 178 (335)
Q Consensus 131 ----------------------~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~----- 178 (335)
+. ...+.. +-.-......+..+|||++++.++ .+.++.++|++....
T Consensus 284 e~~vk~G~~~~~~g~gv~ViD~~~~~~~~~~~~~-~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k 362 (638)
T 3sbq_A 284 EAAVKAGDFITLGDSKTPVLDGRKKDGKDSKFTR-YVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK 362 (638)
T ss_dssp HHHHHTTCCBCCTTCCCCEEECSCBTTBCCSSEE-EEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC
T ss_pred HHHHhcCCeEEECCCCeeEEccccccccCCceEE-EEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc
Confidence 22 111111 111223345678899999988876 467899999874211
Q ss_pred ----ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC----------ceEEEeecCCcEeEEEe---
Q 019847 179 ----SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG----------TCIHGIDAKAQICGLEW--- 241 (335)
Q Consensus 179 ----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~----------~~~~~~~~~~~~~~~~~--- 241 (335)
...+.....-.......+|.++| +.+++-- .|..|.-|++... ..+..+..+..+-.+.-
T Consensus 363 ~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlf--idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~g 439 (638)
T 3sbq_A 363 LADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLF--IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLC 439 (638)
T ss_dssp CSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEET--TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTT
T ss_pred ccCcccceEeeccCCCcccEEEECCCC-ceEeeee--ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCC
Confidence 01111111123446778999998 6667665 8999999998653 45666776666555543
Q ss_pred ---CCCCceeeeeee
Q 019847 242 ---NRHHKEILSGHG 253 (335)
Q Consensus 242 ---~~~~~~~~~~~~ 253 (335)
.|+|++|++.+.
T Consensus 440 et~~~dGk~lv~lnK 454 (638)
T 3sbq_A 440 ETNEADGKWLVALSK 454 (638)
T ss_dssp TSTTCCSCEEEEEES
T ss_pred ccCCCCccEEEEecc
Confidence 688888887643
No 347
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.51 E-value=0.68 Score=36.46 Aligned_cols=223 Identities=13% Similarity=0.072 Sum_probs=115.2
Q ss_pred CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEE
Q 019847 60 YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSC 139 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 139 (335)
.|..++.... ..+.-. ||.|..|-......+..-......|..++... ...++. . ||.++.|-.....++-.
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg~- 96 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTTV- 96 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTCC-
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCCC-
Confidence 5777766433 222234 89999997654322211111234677776642 334444 4 99999998765443211
Q ss_pred eecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEE
Q 019847 140 IKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIW 219 (335)
Q Consensus 140 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~ 219 (335)
...-...|..++...+ +.+.-. ||.|+.|-........ ........|..++.-... .++. .||.++.|
T Consensus 97 P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg---~~~~~~~~i~~i~~G~~~--~~~l----~~G~v~~w 164 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTT---VPAEAQSGVTALDGGVYT--ALAV----KNGGVIAW 164 (282)
T ss_dssp CGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTS---CCGGGGSSEEEEEECSSE--EEEE----ETTEEEEE
T ss_pred CcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCC---CCccCCCCeEEEEcccCE--EEEE----ECCEEEEe
Confidence 1112346777776644 344445 9999999865422211 111123456666654432 2332 36888888
Q ss_pred ECCC-CceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceeecccCCCCceeEeEEcCCCCEEEE
Q 019847 220 NVQK-GTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPDGLTVAT 298 (335)
Q Consensus 220 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 298 (335)
-... ++.-........+..++.-......+ ++|.+..|-......+..-......|..++...+....
T Consensus 165 G~n~~gqlg~p~~~~~~v~~i~~G~~hs~al---------~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~a-- 233 (282)
T 3qhy_B 165 GDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL---------KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLA-- 233 (282)
T ss_dssp ECCTTSTTSCCGGGGSSEEEEEECSSEEEEE---------ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEE--
T ss_pred cCCCCCCCCCceecCCCeEEEEecCCEEEEE---------ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEE--
Confidence 6543 22211111123455554433222221 38999999765433222111112357777765554333
Q ss_pred EeCCCcEEEEecCCCC
Q 019847 299 AGADETIRFWEAFGPS 314 (335)
Q Consensus 299 ~~~dg~v~iw~~~~~~ 314 (335)
-. ||.|..|=.....
T Consensus 234 l~-~g~v~~wG~n~~g 248 (282)
T 3qhy_B 234 LK-NGKVIAWGSSRTA 248 (282)
T ss_dssp EE-TTEEEEESTTCCC
T ss_pred EE-CCEEEEecCCCCc
Confidence 33 8999999766543
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.47 E-value=1 Score=38.26 Aligned_cols=107 Identities=11% Similarity=0.183 Sum_probs=60.7
Q ss_pred cceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee-eEEeec------CCCCEEEEEeecC---CCEEEEEeC------
Q 019847 101 RRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV-TSCIKA------HSGEVCGLKWSNE---GNLLASGGD------ 164 (335)
Q Consensus 101 ~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~------~~~~i~~~~~~~~---~~~l~~~~~------ 164 (335)
...+.++|.| +++++++-...+.|++++...+... ...+.. .......|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4567999999 8887776544457888876533321 111111 2456789999995 555554432
Q ss_pred -------CCeEEEEEccCCC----ccccee-ecc-CCCCCeeEEEecCCCCcEEEEe
Q 019847 165 -------DNVVRIWERSKMS----SSKSLH-RFT-DHCGGVKALAWSPHQVNVLATG 208 (335)
Q Consensus 165 -------dg~i~iwd~~~~~----~~~~~~-~~~-~~~~~v~~~~~~~~~~~~~~~~ 208 (335)
...|.-+++.... ..+.+. .+. ........|+|.|+|..+++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2356666654321 111121 121 1123468999999997555554
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.25 E-value=1 Score=36.84 Aligned_cols=225 Identities=10% Similarity=0.054 Sum_probs=116.5
Q ss_pred cceeeeecCC-c-eEEEecCCeEEEEEecCCceee-EEee----cCCCCCceEEEEcCC---CCEEEEEE-C-------C
Q 019847 18 YSKVIDWGRN-N-VLAVALGPVLFLWKWENGKVKK-LLQV----PGEDDYPTSVSWSHD---AKTLAVGY-M-------D 79 (335)
Q Consensus 18 ~~~~~~~~~~-~-~~~~~~~~~i~vw~~~~~~~~~-~~~~----~~~~~~v~~~~~~~~---~~~l~~~~-~-------d 79 (335)
....|+|.++ + ++++...+.|++++.+ ++... ...+ .........++++|+ +.+|.++. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3456888874 6 7888788999999843 33211 1111 112345689999996 45555443 2 2
Q ss_pred CcEEEEeCCCc--e--eEe----eecc---cccceeEeeecCCCCCEEEEeeCC-------------CcEEEEecccCC-
Q 019847 80 SKLQLWDAETS--K--LVR----NLEG---HHRRVATSSWNHWNGHILTSGSKD-------------KSIINHDVRVSN- 134 (335)
Q Consensus 80 g~i~iw~~~~~--~--~~~----~~~~---~~~~v~~~~~~~~~~~~l~~~~~d-------------g~i~~~d~~~~~- 134 (335)
..|..+++... + ..+ .+.. .......+.|.| ++.+.++-+.. |.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 35666666432 1 111 1111 111245799999 88766665432 456666654220
Q ss_pred -----------eeeEEeecCCCCEEEEEeec-CCCEEEEEeCCC--eEEEEEccCCCc----------------------
Q 019847 135 -----------NVTSCIKAHSGEVCGLKWSN-EGNLLASGGDDN--VVRIWERSKMSS---------------------- 178 (335)
Q Consensus 135 -----------~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg--~i~iwd~~~~~~---------------------- 178 (335)
.......++ .....++|.| ++++++ +.... .=.|.-+..+..
T Consensus 177 ~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~-~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWL-NEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEE-EEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEE-EecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 111111223 3467899999 555444 33221 112221211110
Q ss_pred ------ccceeeccCCCCCeeEEEecC-------CCCcEEEEecCCCCCeEEEEECCCCceEEEee----cCCcEeEEEe
Q 019847 179 ------SKSLHRFTDHCGGVKALAWSP-------HQVNVLATGGGREDGCIKIWNVQKGTCIHGID----AKAQICGLEW 241 (335)
Q Consensus 179 ------~~~~~~~~~~~~~v~~~~~~~-------~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~----~~~~~~~~~~ 241 (335)
..++..+. +...+..+.|.. ++ .++++.- ..+.|...++..++...... ....+..+++
T Consensus 255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g-~l~v~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~ 330 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQ-KLFIGAL--KDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRT 330 (353)
T ss_dssp SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTT-EEEEEET--TTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEE
T ss_pred CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCC-cEEEEEc--cCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEE
Confidence 01111112 223466777764 34 4555543 57888888887665433221 1346888999
Q ss_pred CCCCceeee
Q 019847 242 NRHHKEILS 250 (335)
Q Consensus 242 ~~~~~~~~~ 250 (335)
.|+|...++
T Consensus 331 ~pdG~lyv~ 339 (353)
T 2g8s_A 331 GPDGYLYVL 339 (353)
T ss_dssp CTTSCEEEE
T ss_pred CCCCcEEEE
Confidence 999876554
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.23 E-value=1.3 Score=37.81 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=60.3
Q ss_pred CceEEEEcCCCC-EEEEEECCCcEEEEeCCCce---eEeeec---------ccccceeEeeecCC---CCCEEEEeeCC-
Q 019847 60 YPTSVSWSHDAK-TLAVGYMDSKLQLWDAETSK---LVRNLE---------GHHRRVATSSWNHW---NGHILTSGSKD- 122 (335)
Q Consensus 60 ~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~---~~~~~~---------~~~~~v~~~~~~~~---~~~~l~~~~~d- 122 (335)
....|+|.|+|. .|+++...|.|++++..... .+..+. ........++++|. ++.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 468999999996 56666789999999754221 112111 11456788999882 24444443321
Q ss_pred -----------CcEEEEecccC----------CeeeEEee-cCCCCEEEEEeecCCCEEEEEeCC
Q 019847 123 -----------KSIINHDVRVS----------NNVTSCIK-AHSGEVCGLKWSNEGNLLASGGDD 165 (335)
Q Consensus 123 -----------g~i~~~d~~~~----------~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d 165 (335)
..|.-|.+... +.+..... .....-..|+|.|||.+.++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 13444554321 11222111 112346789999999877776643
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.23 E-value=3.8 Score=38.56 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=32.7
Q ss_pred CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 60 YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.+.+++..++..++++-+.|+++|+|++.+++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777778888899999999999999999999887643
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=92.92 E-value=3.4 Score=34.13 Aligned_cols=208 Identities=8% Similarity=-0.041 Sum_probs=98.3
Q ss_pred CceEEEecCCeEEEEEecC--CceeeEEeecCCCCCceEEEEcC-CCCEEEEEECCC----cEEEEeCCCceeEeeec--
Q 019847 27 NNVLAVALGPVLFLWKWEN--GKVKKLLQVPGEDDYPTSVSWSH-DAKTLAVGYMDS----KLQLWDAETSKLVRNLE-- 97 (335)
Q Consensus 27 ~~~~~~~~~~~i~vw~~~~--~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~-- 97 (335)
+.+++++..| +.+++-+. ......... .....|.++++.| +...|.+++..| .|...+ ..++.-..+.
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~-~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPV-FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEE-STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCcc-CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCcc
Confidence 4566666655 66666543 233322111 2245699999998 334455555454 344332 2222111111
Q ss_pred ----c--------cccceeEeeecCCC-CCEEEEeeCCCcEEEEecccCCeeeEEee-------------------cCCC
Q 019847 98 ----G--------HHRRVATSSWNHWN-GHILTSGSKDKSIINHDVRVSNNVTSCIK-------------------AHSG 145 (335)
Q Consensus 98 ----~--------~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-------------------~~~~ 145 (335)
. ....|.++++.|.+ ...+.++...+.|...+ .+........ ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES--STTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc--CCCCCeEECcCccCCccccccccccccCCCCCC
Confidence 0 11257788888744 56667666666554443 2221111111 1223
Q ss_pred CEEEEEeec-CCCEEEEEeCCCeEEEEEccCCCcccceee-ccC-C--------CCCeeEEEecCCCCcEEEEecCCCCC
Q 019847 146 EVCGLKWSN-EGNLLASGGDDNVVRIWERSKMSSSKSLHR-FTD-H--------CGGVKALAWSPHQVNVLATGGGREDG 214 (335)
Q Consensus 146 ~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~-~--------~~~v~~~~~~~~~~~~~~~~~g~~d~ 214 (335)
.+.+|.+.| +...+..+..++.|...+- .+...+.+.. ... + ...+.++.++|.....+.++. .+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~---~~ 253 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN---HC 253 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE---TT
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc---CC
Confidence 578899988 3445555554554544321 1222222211 000 0 124788999987444444443 34
Q ss_pred eEEEEECCCCceEEEeec--C----CcEeEEEeCCC
Q 019847 215 CIKIWNVQKGTCIHGIDA--K----AQICGLEWNRH 244 (335)
Q Consensus 215 ~i~i~d~~~~~~~~~~~~--~----~~~~~~~~~~~ 244 (335)
.|...+ ..++.-..+.. . ..+..+.++|.
T Consensus 254 gl~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 254 GIYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp EEEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred eEEEeC-CCCCcceECCCCCCCCCccceEEEEECCC
Confidence 455444 22333333221 1 23456777764
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.14 E-value=3.5 Score=32.36 Aligned_cols=239 Identities=13% Similarity=0.113 Sum_probs=123.7
Q ss_pred cceeeeecCCceEEEecCCeEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 18 YSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.+..++-.....++.. |+.|+.|-....-..-. .. .....|..++..... .++. . ||.|..|-......+..-.
T Consensus 25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~-p~-~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTM-PA-ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSC-CG-GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCC-Cc-cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 5677777777777776 99999998654221111 00 112357777765433 2333 4 8999999765422211111
Q ss_pred ccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCC
Q 019847 98 GHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMS 177 (335)
Q Consensus 98 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 177 (335)
.-...|..++... ...+.-. +|.|+.|-.....++-. .......|..++...+ +.+.-. ||.|+.|-.....
T Consensus 99 ~~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 99 EARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp GGSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTS
T ss_pred ccCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCC
Confidence 1134677776643 3334445 99999998765443211 1122345777765443 233334 7999999765422
Q ss_pred cccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCCC-ceEEEeecCCcEeEEEeCCCCceeeeeeeeee
Q 019847 178 SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQKG-TCIHGIDAKAQICGLEWNRHHKEILSGHGFSA 256 (335)
Q Consensus 178 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (335)
... ........|..++.-... .++. . ||.++.|=.... ++-...+....+..++.-..... +
T Consensus 171 qlg---~p~~~~~~v~~i~~G~~h--s~al-~---~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~--------a 233 (282)
T 3qhy_B 171 QTT---VPAEAQSGVDDVAGGIFH--SLAL-K---DGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSL--------A 233 (282)
T ss_dssp TTS---CCGGGGSSEEEEEECSSE--EEEE-E---TTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEE--------E
T ss_pred CCC---CceecCCCeEEEEecCCE--EEEE-E---CCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEE--------E
Confidence 211 111113457777665443 3333 3 889999965432 22111111223444433222111 1
Q ss_pred ecCCCeEEEEECCCCceeecccCCCCceeEeEEcCC
Q 019847 257 SGDGNKLCLWKYPNMTKVGELQSSNSRILDLSQSPD 292 (335)
Q Consensus 257 ~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 292 (335)
-. +|.+..|-.....++.. ...|.+++....
T Consensus 234 l~-~g~v~~wG~n~~gq~~v----~~~v~~iaaG~~ 264 (282)
T 3qhy_B 234 LK-NGKVIAWGSSRTAPSSV----QSGVSSIEAGPN 264 (282)
T ss_dssp EE-TTEEEEESTTCCCCGGG----SSCEEEEEECSS
T ss_pred EE-CCEEEEecCCCCccccC----CCCcEEEEECcC
Confidence 24 88999997665544332 124555555444
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.74 E-value=7.5 Score=36.59 Aligned_cols=38 Identities=11% Similarity=0.259 Sum_probs=31.1
Q ss_pred CeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEee
Q 019847 191 GVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGID 231 (335)
Q Consensus 191 ~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~ 231 (335)
.+.+++..++...+++.+ .|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~---~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLS---LDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEE---TTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEE---CCCEEEEEECCCCCeEeeec
Confidence 466777777777777776 79999999999999988765
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.84 E-value=6.9 Score=33.27 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=60.2
Q ss_pred cceeEeeecCCCCC-EEEEeeCCCcEEEEecccCC--eeeEEe----e-----cCCCCEEEEEeecC----CCEEEEEeC
Q 019847 101 RRVATSSWNHWNGH-ILTSGSKDKSIINHDVRVSN--NVTSCI----K-----AHSGEVCGLKWSNE----GNLLASGGD 164 (335)
Q Consensus 101 ~~v~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~--~~~~~~----~-----~~~~~i~~~~~~~~----~~~l~~~~~ 164 (335)
...+.|+|.| ++. .|+++...|.|++++..... .....+ . ........|+++|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4667899999 775 45566788999999754221 111111 1 11457889999996 444343332
Q ss_pred C------------CeEEEEEccCCC-------cccceeecc--CCCCCeeEEEecCCCCcEEEEec
Q 019847 165 D------------NVVRIWERSKMS-------SSKSLHRFT--DHCGGVKALAWSPHQVNVLATGG 209 (335)
Q Consensus 165 d------------g~i~iwd~~~~~-------~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~ 209 (335)
+ ..|.-|.+.... ..+.+..+. .....-..|.|.|||..+++++.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 145556654311 112222221 12234678999999976666653
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.11 E-value=3 Score=40.17 Aligned_cols=38 Identities=24% Similarity=0.260 Sum_probs=31.8
Q ss_pred CceEEEEcCCCCEEEEEECCCcEEEEeCCCceeEeeec
Q 019847 60 YPTSVSWSHDAKTLAVGYMDSKLQLWDAETSKLVRNLE 97 (335)
Q Consensus 60 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 97 (335)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44566677788899999999999999999999887643
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=87.40 E-value=5.3 Score=35.88 Aligned_cols=81 Identities=14% Similarity=0.083 Sum_probs=50.0
Q ss_pred cccceeeeecCCceEEEecCCeEEEEEecCCceeeEEee-------------cC-----CCCCceEEEEcCCCCEEEEEE
Q 019847 16 DYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQV-------------PG-----EDDYPTSVSWSHDAKTLAVGY 77 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~-------------~~-----~~~~v~~~~~~~~~~~l~~~~ 77 (335)
..+...++.+++.++++-.||.+.-.+.+.........+ .+ ....|.++.+ +..++++-+
T Consensus 161 R~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~--~~~fLftL~ 238 (729)
T 3f7f_A 161 RVPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLF--HERYLIVLT 238 (729)
T ss_dssp SCEEEEEECSSSBEEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEE--TTTEEEEEE
T ss_pred cCCcEEEEECCCeEEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEecc--CCcEEEEEE
Confidence 344455666777777777777665555443221111111 11 1123444444 577999999
Q ss_pred CCCcEEEEeCCCceeEeeecc
Q 019847 78 MDSKLQLWDAETSKLVRNLEG 98 (335)
Q Consensus 78 ~dg~i~iw~~~~~~~~~~~~~ 98 (335)
.|.++|+|++.+++++....-
T Consensus 239 ~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 239 QNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTCEEEEEETTTTEEEEEEET
T ss_pred cCCeEEEEEcCCCceEEeecc
Confidence 999999999999998877653
No 358
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=87.23 E-value=11 Score=31.00 Aligned_cols=270 Identities=13% Similarity=0.145 Sum_probs=122.2
Q ss_pred cCCceEEEecCCeEEEEEecC-Cce-------eeE-EeecC-CCCCceEEEEcCCCCEEEEEECCCcEEEEeCCCc----
Q 019847 25 GRNNVLAVALGPVLFLWKWEN-GKV-------KKL-LQVPG-EDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAETS---- 90 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~-~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---- 90 (335)
....+++...||.|+.|=... +++ ... ..... ....|..++- .....+.-..||.|..|-....
T Consensus 9 ~~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~~~~l~~~G~v~~wG~n~~GqLG 86 (389)
T 3kci_A 9 SGRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIG--GEQTLFAVTADGKLYATGYGAGGRLG 86 (389)
T ss_dssp ------------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEE--ETTEEEEEETTSCEEEEECCGGGTTS
T ss_pred CcccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEe--CCCeEEEEcCCCcEEEEECCCCCCCC
Confidence 445677778899999996543 211 111 01000 0112333432 3445555567888998864321
Q ss_pred -------eeEeeecc-cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee----------eEEeec-CCCCEEEEE
Q 019847 91 -------KLVRNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV----------TSCIKA-HSGEVCGLK 151 (335)
Q Consensus 91 -------~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~----------~~~~~~-~~~~i~~~~ 151 (335)
.....+.. ....+..++.+. .....+.-..||.|+.|-.....++ ...... ....|..++
T Consensus 87 ~g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va 165 (389)
T 3kci_A 87 IGGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVA 165 (389)
T ss_dssp SSSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred CCCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEE
Confidence 11111211 112344455555 5566677788999999965432110 111111 123566665
Q ss_pred eecCCCEEEEEeCCCeEEEEEccCCCc---------ccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEEECC
Q 019847 152 WSNEGNLLASGGDDNVVRIWERSKMSS---------SKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQ 222 (335)
Q Consensus 152 ~~~~~~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~ 222 (335)
.. ..+.+.-..||.|+.|-...... ..+..........|..++........++.. .||.|+.|-..
T Consensus 166 ~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~---~~G~v~~wG~n 240 (389)
T 3kci_A 166 AG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT---DDDTVWSWGDG 240 (389)
T ss_dssp EC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEE---TTTEEEEEECC
T ss_pred eC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEc---cCCEEEEEeCC
Confidence 43 34566667899999997432110 001111111223466666544222344443 68999999643
Q ss_pred CC-c---------e-EEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCcee-----------eccc
Q 019847 223 KG-T---------C-IHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKV-----------GELQ 278 (335)
Q Consensus 223 ~~-~---------~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~-----------~~~~ 278 (335)
.. + . ...++. ...+..++.-..... +-..+|.|..|-....-.+ ..+.
T Consensus 241 ~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~--------alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~ 312 (389)
T 3kci_A 241 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSV--------ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQ 312 (389)
T ss_dssp GGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEE--------EEETTSCEEEEECCGGGTTCSSSCCCEEEEEECG
T ss_pred CCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEE--------EEeCCCeEEEEeCCCCCCCCCCCCccccCCeEec
Confidence 21 1 0 011111 112444433222221 2256899999975431111 1111
Q ss_pred C-CCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 279 S-SNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 279 ~-~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
. ....|..++.... ..+....||.|+.|=...
T Consensus 313 ~l~~~~v~~ia~G~~--h~~al~~~G~v~~wG~n~ 345 (389)
T 3kci_A 313 GLQGKKVIAIATGSL--HCVCCTEDGEVYTWGDND 345 (389)
T ss_dssp GGTTCCEEEEEECSS--EEEEEETTCCEEEEECCT
T ss_pred cCCCCCEEEEEeccC--eEEEECCCCCEEEeeCCC
Confidence 1 1124555555333 455567899999997654
No 359
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=86.44 E-value=10 Score=29.62 Aligned_cols=143 Identities=10% Similarity=0.022 Sum_probs=88.1
Q ss_pred CCceEEEecCCeEEE---EEecCCceeeEEeecCCCCCceEEEEcC--CCCEEEEEECCCcEEEEeCCCc------eeEe
Q 019847 26 RNNVLAVALGPVLFL---WKWENGKVKKLLQVPGEDDYPTSVSWSH--DAKTLAVGYMDSKLQLWDAETS------KLVR 94 (335)
Q Consensus 26 ~~~~~~~~~~~~i~v---w~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~------~~~~ 94 (335)
.+.++..+..|.++- |++..+.... + +. ....|..+.. + +..+++..+.+|.++-..+..- ....
T Consensus 35 ~~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i 110 (276)
T 3no0_A 35 TEGLFLVSNRGRVYWIAGSQALQGSKVS-L-KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPII 110 (276)
T ss_dssp TSCEEEEETTSEEEEECSHHHHTSEECC-C-SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECS
T ss_pred CCEEEEEcCCCeEEEEEhhhCccCcccc-c-CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEE
Confidence 357888888887665 3443332222 3 43 3556766644 4 5678999999999999986542 2222
Q ss_pred eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe--------eeEEeecCCCCEEEEEeecCCCEEEEEeCCC
Q 019847 95 NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN--------VTSCIKAHSGEVCGLKWSNEGNLLASGGDDN 166 (335)
Q Consensus 95 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 166 (335)
.++. .+.+..+.... ....++..+..|.+..+....-.. ....+. ....|..+...+++..++..+..|
T Consensus 111 ~lke-gD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G 187 (276)
T 3no0_A 111 KLTE-GDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKG 187 (276)
T ss_dssp CCCT-TCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTS
T ss_pred ecCC-CCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCC
Confidence 2332 24455554444 556788888899988887643111 011121 235566666556667888999999
Q ss_pred eEEEEEccC
Q 019847 167 VVRIWERSK 175 (335)
Q Consensus 167 ~i~iwd~~~ 175 (335)
.++...+..
T Consensus 188 ~~kr~~~~e 196 (276)
T 3no0_A 188 RVKKISHEE 196 (276)
T ss_dssp CEEEEEGGG
T ss_pred cEEEeEHHH
Confidence 999988764
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=83.70 E-value=15 Score=29.26 Aligned_cols=231 Identities=10% Similarity=0.057 Sum_probs=119.5
Q ss_pred CCCCEEEEEECCCcEEEEeCCCcee-------Ee--eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee--
Q 019847 68 HDAKTLAVGYMDSKLQLWDAETSKL-------VR--NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV-- 136 (335)
Q Consensus 68 ~~~~~l~~~~~dg~i~iw~~~~~~~-------~~--~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-- 136 (335)
|+..++++.+.+|.|+--.+..-+. +. .++. .+.+..+.... ..+.++..+..|.++-+....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~~ip~~~r 83 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVN-THDYLFMISNEGKLYLINAYEIKDSSR 83 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCC---
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEEC-CCCEEEEEECCCeEEEEEHHHCCCCCc
Confidence 4667888899999998886643211 11 1222 23344444444 5566777788888777665321110
Q ss_pred ---------eEEeecCCCCEEEEEeec---CCCEEEEEeCCCeEEEEEccCCCc----ccceeeccCCCCCeeEEEecCC
Q 019847 137 ---------TSCIKAHSGEVCGLKWSN---EGNLLASGGDDNVVRIWERSKMSS----SKSLHRFTDHCGGVKALAWSPH 200 (335)
Q Consensus 137 ---------~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~v~~~~~~~~ 200 (335)
...+. ....|..+...+ ++.+++..+..|.++...+..... +.....+.. .+.+..+.....
T Consensus 84 ~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 84 ASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp ----CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred cCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 00011 223455554332 467788899999999988765322 111222332 445555555444
Q ss_pred CCcEEEEecCCCCCeEEEEECCC---------CceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCC
Q 019847 201 QVNVLATGGGREDGCIKIWNVQK---------GTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNM 271 (335)
Q Consensus 201 ~~~~~~~~~g~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~ 271 (335)
+..++... .+|.+..+.... |.....+..+..+..+..-.++..++.. +..|..+..++...
T Consensus 162 ~~~i~l~T---~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~v------t~~G~~kr~~~~e~ 232 (312)
T 1suu_A 162 DEKVICLS---KKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIV------SENGYGKRLNMSKI 232 (312)
T ss_dssp TCEEEEEE---TTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEE------ETTSEEEEEEGGGS
T ss_pred CCEEEEEe---CCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEE------ECCCceEEEEHHHh
Confidence 44455544 689888887643 1222223334455555544444444433 56788888776432
Q ss_pred c---------eeeccc-CCCCceeEe-EEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 272 T---------KVGELQ-SSNSRILDL-SQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 272 ~---------~~~~~~-~~~~~i~~~-~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
. ....+. .....+..+ .+.++ .-+...+..|.+.-.....
T Consensus 233 ~~~~R~~kGv~~~~~~k~~~~~lv~~~~~~~~-~~l~~~t~~g~~~r~~~~~ 283 (312)
T 1suu_A 233 SELKRGATGYTSYKKSDKKAGSVVDAIAVSED-DEILLVSKRSKALRTVAGK 283 (312)
T ss_dssp CBCCTTCCCEECSCTTCTTTCSEEEEEEECTT-CEEEEEETTCEEEEEEGGG
T ss_pred cccCCCCCCEEeeEccCCCCCeEEEEEEeCCC-CEEEEEeCCCeEEEEEccc
Confidence 1 111222 222344333 44444 4455556667554444443
No 361
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=82.44 E-value=19 Score=29.60 Aligned_cols=196 Identities=12% Similarity=0.104 Sum_probs=105.6
Q ss_pred cceeeeecCCceEEEecCCeEEEEEecCC-c--------eeeEEeecC-CCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 18 YSKVIDWGRNNVLAVALGPVLFLWKWENG-K--------VKKLLQVPG-EDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~i~vw~~~~~-~--------~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
.+..++-.....++...+|.|+.|=.... + ......++. ....+..++++......++-..||.|..|-.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Confidence 34556656667788889999999964321 1 111111111 2234555677766677777788999999964
Q ss_pred CCc-----------eeEeeeccc-ccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe-----------eeEEeecCC
Q 019847 88 ETS-----------KLVRNLEGH-HRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN-----------VTSCIKAHS 144 (335)
Q Consensus 88 ~~~-----------~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-----------~~~~~~~~~ 144 (335)
... .....+... ...|..++. .....++-..+|.|+.|-.....+ +........
T Consensus 134 n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~ 210 (389)
T 3kci_A 134 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA---GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 210 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTT
T ss_pred CCCCcCCCCCCccCcCCeEecccCCCeEEEEEe---CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCC
Confidence 321 111112211 124555555 455666667899999997543211 111111123
Q ss_pred CCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc---------cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCe
Q 019847 145 GEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS---------KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGC 215 (335)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~ 215 (335)
..|..++......+.+.-..||.|+.|-....... .+..........|..++.-... .++.. .+|.
T Consensus 211 ~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~h--s~alt---~~G~ 285 (389)
T 3kci_A 211 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF--SVALT---KSGA 285 (389)
T ss_dssp SCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTE--EEEEE---TTSC
T ss_pred CeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCE--EEEEe---CCCe
Confidence 45666765543356666778999999964321110 0111111112246666654432 33333 6899
Q ss_pred EEEEEC
Q 019847 216 IKIWNV 221 (335)
Q Consensus 216 i~i~d~ 221 (335)
|+.|=.
T Consensus 286 v~~wG~ 291 (389)
T 3kci_A 286 VYTWGK 291 (389)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 999965
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.33 E-value=23 Score=29.09 Aligned_cols=174 Identities=6% Similarity=-0.044 Sum_probs=84.5
Q ss_pred CCEEEEEECCCcEEEEeCCC-ceeEeee--cccccceeEeeecCCCCCEEEEeeCCC----cEEEEecccCCeeeEEee-
Q 019847 70 AKTLAVGYMDSKLQLWDAET-SKLVRNL--EGHHRRVATSSWNHWNGHILTSGSKDK----SIINHDVRVSNNVTSCIK- 141 (335)
Q Consensus 70 ~~~l~~~~~dg~i~iw~~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~- 141 (335)
...|.+|+..| +.+++... ++.-... ......|.++.+.|.+...+.++...| .|... ...........
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s--~D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRS--DDGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE--SSTTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEe--CCCCCCceECCc
Confidence 34677787777 55555432 2211111 123457999999885566666666555 34333 22221111111
Q ss_pred -----c--------CCCCEEEEEeec-C-CCEEEEEeCCCeEEEEEccCCCcccceeecc----------------CCCC
Q 019847 142 -----A--------HSGEVCGLKWSN-E-GNLLASGGDDNVVRIWERSKMSSSKSLHRFT----------------DHCG 190 (335)
Q Consensus 142 -----~--------~~~~i~~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------------~~~~ 190 (335)
. ....|.++++.| + ...+.++...+.|...+-. +...+.+.... ....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCC
Confidence 0 112477888887 2 4556666666666554311 22222222111 1223
Q ss_pred CeeEEEecCCC-CcEEEEecCCCCCeEEEEECCCCceEEEeec--------------CCcEeEEEeCCCC-ceeeee
Q 019847 191 GVKALAWSPHQ-VNVLATGGGREDGCIKIWNVQKGTCIHGIDA--------------KAQICGLEWNRHH-KEILSG 251 (335)
Q Consensus 191 ~v~~~~~~~~~-~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~-~~~~~~ 251 (335)
.+.++.++|.. ..+++.. .++.|...+ ..++.-..+.. ...+..+.++|.. ..+..+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~---~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg 250 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGM---SSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQ 250 (394)
T ss_dssp EEEEEEECTTCTTCEEEEE---ETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEE
T ss_pred ceeEEEECCCCCCEEEEEE---CCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEE
Confidence 57889998853 3455443 244444332 22322222211 1247888888863 444443
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=78.51 E-value=27 Score=28.78 Aligned_cols=159 Identities=9% Similarity=0.092 Sum_probs=89.6
Q ss_pred eEEEEEecCC--ceeeEEeecCC----CCCceEEEEc---CC----CCEEEEEE-CCCcEEEEeCCCceeEeeecccccc
Q 019847 37 VLFLWKWENG--KVKKLLQVPGE----DDYPTSVSWS---HD----AKTLAVGY-MDSKLQLWDAETSKLVRNLEGHHRR 102 (335)
Q Consensus 37 ~i~vw~~~~~--~~~~~~~~~~~----~~~v~~~~~~---~~----~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~ 102 (335)
+|.+||+.++ +..+.+.++.. .+.+..+++. |. +.++..+. ..+-|.|+|+.+++.-+... .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~--~-- 199 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTH--P-- 199 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEEC--G--
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEcc--C--
Confidence 6889999999 88888877532 3457788887 22 33444443 46789999999988766552 1
Q ss_pred eeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeecCCCCEEEEEeecC----CCEEEEEeCCC-eEEEEE---cc
Q 019847 103 VATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKAHSGEVCGLKWSNE----GNLLASGGDDN-VVRIWE---RS 174 (335)
Q Consensus 103 v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~----~~~l~~~~~dg-~i~iwd---~~ 174 (335)
.|.| +....++ -+|.-. . -...+..|+.+|+ ++.|......+ .++--. ++
T Consensus 200 ----~~~p-d~~~~~~--i~G~~~-----------~----~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~ 257 (381)
T 3q6k_A 200 ----TFKA-ERPTKFD--YGGKEY-----------E----FKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELK 257 (381)
T ss_dssp ----GGSC-CSCEEEE--ETTEEE-----------E----ECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHS
T ss_pred ----CCcc-ccCcceE--ECCEEe-----------E----eccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhh
Confidence 1344 3111111 112111 1 1345888999997 67777766554 233222 22
Q ss_pred CCCcccceeeccCC--CCCeeEEEecCCCCcEEEEecCCCCCeEEEEECCC
Q 019847 175 KMSSSKSLHRFTDH--CGGVKALAWSPHQVNVLATGGGREDGCIKIWNVQK 223 (335)
Q Consensus 175 ~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~ 223 (335)
.......++.+... ...-..++..+....++.+-- ..+.|..|+..+
T Consensus 258 ~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~--~~~aI~~w~~~~ 306 (381)
T 3q6k_A 258 QKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEA--NTKQVSCWNTQK 306 (381)
T ss_dssp STTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEES--SSSEEEEEETTS
T ss_pred CcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEec--cCCeEEEEeCCC
Confidence 22212222222111 123345667633335666654 788999999875
No 364
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=77.65 E-value=41 Score=30.47 Aligned_cols=221 Identities=14% Similarity=0.136 Sum_probs=109.3
Q ss_pred eEEEEEecCCceeeE-EeecCCCC------CceEEEEcCCCCEEEEEE-----------CCCcEEEEeCCCce--eEeee
Q 019847 37 VLFLWKWENGKVKKL-LQVPGEDD------YPTSVSWSHDAKTLAVGY-----------MDSKLQLWDAETSK--LVRNL 96 (335)
Q Consensus 37 ~i~vw~~~~~~~~~~-~~~~~~~~------~v~~~~~~~~~~~l~~~~-----------~dg~i~iw~~~~~~--~~~~~ 96 (335)
.++++|+.+++...- +. +.-+. ....++|.. .+-++.+. ....|+.|.+-+.. -...+
T Consensus 157 ~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~ 234 (711)
T 4hvt_A 157 FFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLF 234 (711)
T ss_dssp EEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEECCcCCcCCCCcc-cccccccccccccceeeEEC-CCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEe
Confidence 799999999876431 11 11011 113447763 33444432 12468888775532 22223
Q ss_pred cccccce-eEeeecCCCCC-----EEEEeeCC---CcEEEEecccCC-eeeEEeecCCCCEEEEEeecCCCEEEEE----
Q 019847 97 EGHHRRV-ATSSWNHWNGH-----ILTSGSKD---KSIINHDVRVSN-NVTSCIKAHSGEVCGLKWSNEGNLLASG---- 162 (335)
Q Consensus 97 ~~~~~~v-~~~~~~~~~~~-----~l~~~~~d---g~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~---- 162 (335)
.+....+ .....++ ++. .+++.+.+ ..+.+.+..... ............ +..+.++.+++..
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~ 310 (711)
T 4hvt_A 235 EVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDAT---LQGSFKEYVFWLLRSDW 310 (711)
T ss_dssp ECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTCE---EEEEETTEEEEECSSCE
T ss_pred ccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcce---EeeeECCEEEEEECccc
Confidence 3222222 2233344 433 34443322 345666654322 222222222211 2334455555532
Q ss_pred ------eCCCeEEEEEccCCCcc----cceee-cc-CCCCCeeEEEecCCCCcEEEEecCCCCC--eEEEEECCCCc-eE
Q 019847 163 ------GDDNVVRIWERSKMSSS----KSLHR-FT-DHCGGVKALAWSPHQVNVLATGGGREDG--CIKIWNVQKGT-CI 227 (335)
Q Consensus 163 ------~~dg~i~iwd~~~~~~~----~~~~~-~~-~~~~~v~~~~~~~~~~~~~~~~~g~~d~--~i~i~d~~~~~-~~ 227 (335)
...+.|...|+..+... ..... +. .....+..+.|..+ .++++.. .++ .+.++|+.+++ ..
T Consensus 311 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~l~~~~~--~~~~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 311 KFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD--RVFLATY--DNVVAKVVTFTLENEQWTK 386 (711)
T ss_dssp EETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS--CEEEEEE--ETTEEEEEEECEETTEECC
T ss_pred ccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC--EEEEEEE--ECCEEEEEEEECCCCceEE
Confidence 24677889998764211 12222 21 22345678888876 4666554 555 46777776664 22
Q ss_pred EE-eec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECC
Q 019847 228 HG-IDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYP 269 (335)
Q Consensus 228 ~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~ 269 (335)
.. +.. ...+.....++++..++.. +.+...-..+..+|+.
T Consensus 387 ~~~i~lp~~~~~~~~~~~~~~~~~~~~--~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 387 PVVLKLPYQNAIFGMSSYEEEEEALIT--IENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEECCCSTTCEEEEECCTTCSCEEEE--EECSSSCCEEEEECTT
T ss_pred EeccCCCCCeEEEEEeecCcCCEEEEE--EecCCCCCEEEEEeCC
Confidence 33 332 3456666677777666544 2223456788888876
No 365
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.48 E-value=8.7 Score=37.03 Aligned_cols=39 Identities=10% Similarity=0.242 Sum_probs=29.9
Q ss_pred CeeEEEecCCCCcEEEEecCCCCCeEEEEECCCCceEEEeec
Q 019847 191 GVKALAWSPHQVNVLATGGGREDGCIKIWNVQKGTCIHGIDA 232 (335)
Q Consensus 191 ~v~~~~~~~~~~~~~~~~~g~~d~~i~i~d~~~~~~~~~~~~ 232 (335)
.+.+++..++...+++.+ .|+++|+|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~---~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLS---LDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEB---TTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEe---CCCEEEEEECCCCCeEEeech
Confidence 344556666766676766 799999999999999887653
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=77.22 E-value=27 Score=28.07 Aligned_cols=158 Identities=12% Similarity=0.064 Sum_probs=91.9
Q ss_pred ccccceeeeecC-CceEEEecCCeEEEEEe---cCCc----eee---EEeecCCCCCceEEEEcC---CCCEEEEEECCC
Q 019847 15 EDYYSKVIDWGR-NNVLAVALGPVLFLWKW---ENGK----VKK---LLQVPGEDDYPTSVSWSH---DAKTLAVGYMDS 80 (335)
Q Consensus 15 ~~~~~~~~~~~~-~~~~~~~~~~~i~vw~~---~~~~----~~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg 80 (335)
.|+....+.-+. +.++..+..|.++-... .... -.+ .+.+. ....|..+..-+ +..+++..+.+|
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 344444443333 57777888887665553 2221 111 12232 244565554333 577999999999
Q ss_pred cEEEEeCCCc-------eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc--cCCee------eEEe-ecCC
Q 019847 81 KLQLWDAETS-------KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR--VSNNV------TSCI-KAHS 144 (335)
Q Consensus 81 ~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~--~~~~~------~~~~-~~~~ 144 (335)
.++--.+..- .....++. .+.+..+.... ....++..+..|.+..+... .-... ...+ ....
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~ 197 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNID 197 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTT
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCC
Confidence 9999876532 22223333 34455554444 55677778889988887765 21110 0001 1234
Q ss_pred CCEEEEEeecCCCEEEEEeCCCeEEEEEccC
Q 019847 145 GEVCGLKWSNEGNLLASGGDDNVVRIWERSK 175 (335)
Q Consensus 145 ~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 175 (335)
..|.++...+++..++..+..|.++.-.+..
T Consensus 198 d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 198 DRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 5577766666667899999999999888654
No 367
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=76.88 E-value=43 Score=30.32 Aligned_cols=239 Identities=13% Similarity=0.107 Sum_probs=116.3
Q ss_pred ceEEE-EcCCCCEEEEEECC-----CcEEEEeCCCceeEee-ecc-ccc------ceeEeeecCCCCCEEEEee------
Q 019847 61 PTSVS-WSHDAKTLAVGYMD-----SKLQLWDAETSKLVRN-LEG-HHR------RVATSSWNHWNGHILTSGS------ 120 (335)
Q Consensus 61 v~~~~-~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~-~~~-~~~------~v~~~~~~~~~~~~l~~~~------ 120 (335)
...+. ++|++++++.+-++ ..++++|+.+++.+.. +.. .+. ....++|.. ++.++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCCCCc
Confidence 34455 88999988776322 3799999999987742 220 000 113447764 444444321
Q ss_pred ----CCCcEEEEecccCCe-eeEEeecCCCCE-EEEEeecCCCE-----EEEEeCC---CeEEEEEccCCCcccceeecc
Q 019847 121 ----KDKSIINHDVRVSNN-VTSCIKAHSGEV-CGLKWSNEGNL-----LASGGDD---NVVRIWERSKMSSSKSLHRFT 186 (335)
Q Consensus 121 ----~dg~i~~~d~~~~~~-~~~~~~~~~~~i-~~~~~~~~~~~-----l~~~~~d---g~i~iwd~~~~~~~~~~~~~~ 186 (335)
....++.|.+-+... -...+.+....+ .....++++++ +++.+.+ ..+.+.|...+.. .+..+.
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 287 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNL--KLQKIN 287 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSC--EEEECC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCC--cceEee
Confidence 124678887755422 122333333332 33445566652 4443322 3456666543221 122222
Q ss_pred CCCCCeeEEEecCCCCcEEEEec-------CCCCCeEEEEECCCCc-------eEEE-eec--CCcEeEEEeCCCCceee
Q 019847 187 DHCGGVKALAWSPHQVNVLATGG-------GREDGCIKIWNVQKGT-------CIHG-IDA--KAQICGLEWNRHHKEIL 249 (335)
Q Consensus 187 ~~~~~v~~~~~~~~~~~~~~~~~-------g~~d~~i~i~d~~~~~-------~~~~-~~~--~~~~~~~~~~~~~~~~~ 249 (335)
..... .+..++++..++.+.. +...+.|...|+.++. .... +.. ...+..+.+..+. .++
T Consensus 288 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-l~~ 364 (711)
T 4hvt_A 288 MPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR-VFL 364 (711)
T ss_dssp SCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC-EEE
T ss_pred cCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE-EEE
Confidence 12211 1233444433332211 0036778889887632 1222 332 3457788888763 333
Q ss_pred eeeeeeeecCCC--eEEEEECCCCc-eeec-ccCC-CCceeEeEEcCCCC-EEEEEeC---CCcEEEEecC
Q 019847 250 SGHGFSASGDGN--KLCLWKYPNMT-KVGE-LQSS-NSRILDLSQSPDGL-TVATAGA---DETIRFWEAF 311 (335)
Q Consensus 250 ~~~~~~~~~~~~--~i~i~d~~~~~-~~~~-~~~~-~~~i~~~~~~~~~~-~l~~~~~---dg~v~iw~~~ 311 (335)
+. ..++ .+.++++.+++ .... +.-. .+.+.....++++. ++++.+. -+.+..+|+.
T Consensus 365 ~~------~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 AT------YDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EE------EETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EE------EECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 32 2233 57777766554 2222 2211 23466666667664 4444432 3556666665
No 368
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=75.87 E-value=26 Score=27.29 Aligned_cols=158 Identities=11% Similarity=0.120 Sum_probs=86.2
Q ss_pred CCCEEEEEeec-CCCEEEEEeCCCeEEEEEccCCC---cccceeeccCCCCCeeEEEecCCCCcEEEEecCCCCCeEEEE
Q 019847 144 SGEVCGLKWSN-EGNLLASGGDDNVVRIWERSKMS---SSKSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDGCIKIW 219 (335)
Q Consensus 144 ~~~i~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~~i~i~ 219 (335)
...|..+.... ++.+++..+.+|.++...+.... .......+. ..+.+..+........++... ..|.+..+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T---~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFT---KKGRVARF 142 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEE---TTSEEEEE
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEE---CCCEEEEE
Confidence 44565554321 56789999999999999876542 011111122 234555555554444566555 68888888
Q ss_pred ECCC---------CceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCC-------ceeecccCCCCc
Q 019847 220 NVQK---------GTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNM-------TKVGELQSSNSR 283 (335)
Q Consensus 220 d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~-------~~~~~~~~~~~~ 283 (335)
+... |.....+.....+..+...+++..++.. +..|.++...+... +-+..+ ...+.
T Consensus 143 ~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~------T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~ 215 (276)
T 3no0_A 143 SVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVI------TAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDT 215 (276)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEE------ETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSC
T ss_pred EhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEE------eCCCcEEEeEHHHcccCCCCCcceEEE-cCCCc
Confidence 7532 2222223334455555444444444433 56777777765332 122223 22344
Q ss_pred eeEeEEcCCCCEEEEEeCCCcEEE--EecCC
Q 019847 284 ILDLSQSPDGLTVATAGADETIRF--WEAFG 312 (335)
Q Consensus 284 i~~~~~~~~~~~l~~~~~dg~v~i--w~~~~ 312 (335)
+..+....+...++..+.+|.+.. ++...
T Consensus 216 lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 216 LVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 554443334446777788888888 87654
No 369
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.54 E-value=22 Score=32.02 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=32.3
Q ss_pred ccccceeeeecCCceEEEecCCeEEEEEecCCceeeEEee
Q 019847 15 EDYYSKVIDWGRNNVLAVALGPVLFLWKWENGKVKKLLQV 54 (335)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~~ 54 (335)
.+..+.++.+....+++.+.|.++|+|++.++++.....+
T Consensus 220 ~~~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 220 YDSVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CCCEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred cCceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3444666677777889999999999999999998777766
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=72.62 E-value=34 Score=27.17 Aligned_cols=190 Identities=8% Similarity=0.040 Sum_probs=104.9
Q ss_pred CCCEEEEeeCCCcEEEEecccCCeee--------EEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc----
Q 019847 112 NGHILTSGSKDKSIINHDVRVSNNVT--------SCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS---- 179 (335)
Q Consensus 112 ~~~~l~~~~~dg~i~~~d~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---- 179 (335)
+...+++.+.+|.|+--.+..-.... ..+. ....+..+........++..+..|.++-+........
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 66788899999999988765432111 0112 2344555555555567888888999887775432111
Q ss_pred --cc---eeeccCCCCCeeEEEecC---CCCcEEEEecCCCCCeEEEEECCC-------CceEEEeecCCcEeEEEeCCC
Q 019847 180 --KS---LHRFTDHCGGVKALAWSP---HQVNVLATGGGREDGCIKIWNVQK-------GTCIHGIDAKAQICGLEWNRH 244 (335)
Q Consensus 180 --~~---~~~~~~~~~~v~~~~~~~---~~~~~~~~~~g~~d~~i~i~d~~~-------~~~~~~~~~~~~~~~~~~~~~ 244 (335)
.+ ...+. ....|..+...+ +..+++... .+|.++...+.. |.....+.....+..+.....
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T---~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~ 161 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTT---ASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFK 161 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEE---TTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECT
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEe---CCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCC
Confidence 11 11122 223454443332 234455544 689999887743 222223333445555444433
Q ss_pred CceeeeeeeeeeecCCCeEEEEECCCCc---------eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 245 HKEILSGHGFSASGDGNKLCLWKYPNMT---------KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
...++.. +.+|....+....-. ....+.. ...|..+..-+++..|++.+..|..+..++..-
T Consensus 162 ~~~i~l~------T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 162 DEKVICL------SKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp TCEEEEE------ETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred CCEEEEE------eCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 3334333 568888888764321 1222332 345666655555667888899999999888653
No 371
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=72.46 E-value=34 Score=27.10 Aligned_cols=234 Identities=8% Similarity=0.012 Sum_probs=118.6
Q ss_pred CCCCEEEEEECCCcEEEEeCCCceeEe---------eecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc---cCCe
Q 019847 68 HDAKTLAVGYMDSKLQLWDAETSKLVR---------NLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR---VSNN 135 (335)
Q Consensus 68 ~~~~~l~~~~~dg~i~iw~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~ 135 (335)
|+..++++.+.+|.|+--.+.+-+..+ .++. .+.+..+.... ..+.|+..+..|.++-+... ....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~-~~~~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVAN-THDHILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEEC-CCCEEEEEECCCEEEEEEhhHCcCCCC
Confidence 455678888899998877665322111 1222 23333333333 45566667778876655542 2111
Q ss_pred ------eeEEee-cCCCCEEEEEee---cCCCEEEEEeCCCeEEEEEccCCCccc----ceeeccCCCCCeeEEEecCCC
Q 019847 136 ------VTSCIK-AHSGEVCGLKWS---NEGNLLASGGDDNVVRIWERSKMSSSK----SLHRFTDHCGGVKALAWSPHQ 201 (335)
Q Consensus 136 ------~~~~~~-~~~~~i~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~ 201 (335)
+...+. .....|.++..- +++.+++..+..|.++.-.+....... ....+..+ +.+..+......
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 011111 233456555432 345678899999999999875432211 11122223 455554444444
Q ss_pred CcEEEEecCCCCCeEEEEECCC---------CceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCc
Q 019847 202 VNVLATGGGREDGCIKIWNVQK---------GTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMT 272 (335)
Q Consensus 202 ~~~~~~~~g~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~ 272 (335)
..++... .+|.+..++... |.....+.....+..+...+++..++.. +..|..+-.++....
T Consensus 158 ~~i~l~T---~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~------T~~G~~Kr~~~~e~~ 228 (307)
T 1zi0_A 158 DEVMLFS---AEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTA------TQNGYGKRTAVAEYP 228 (307)
T ss_dssp CEEEEEE---TTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEE------ETTSEEEEECGGGSC
T ss_pred CEEEEEC---CCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEE------EcCCceEEEEHHHhc
Confidence 4455554 588888777632 1122233344556666554444444433 567777777653211
Q ss_pred ---------eeecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 273 ---------KVGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 273 ---------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
....+..-.+.+..+....+..-++..+.+|.+.-++...-
T Consensus 229 ~~~Rg~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~i 278 (307)
T 1zi0_A 229 TKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEI 278 (307)
T ss_dssp CCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGGS
T ss_pred cCCCCCCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEecccc
Confidence 11222222344544444333445666777888777776653
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.00 E-value=21 Score=31.26 Aligned_cols=66 Identities=17% Similarity=0.094 Sum_probs=42.7
Q ss_pred cEeEEEeCCCCceeeeeee-ee-----eecCCCeEEEEECCCCceeecccCC-CCceeEeEEcCCCCEEEEEe
Q 019847 235 QICGLEWNRHHKEILSGHG-FS-----ASGDGNKLCLWKYPNMTKVGELQSS-NSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~ 300 (335)
....+.|+++|.+.+.... +. .....+.+..++..+++....+... ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3567899999887763211 00 0001236777777777765555433 35789999999999888763
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=71.95 E-value=37 Score=27.25 Aligned_cols=230 Identities=9% Similarity=0.013 Sum_probs=119.2
Q ss_pred CEEEEEECCCcEEEEeCCCc-------eeE--eeecccccceeEeeecCCCCCEEEEeeCCCcEEEEe---cccCC----
Q 019847 71 KTLAVGYMDSKLQLWDAETS-------KLV--RNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHD---VRVSN---- 134 (335)
Q Consensus 71 ~~l~~~~~dg~i~iw~~~~~-------~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d---~~~~~---- 134 (335)
..+++-+.+|.|+--.+.+- +-+ ..++ ..+.+..+.... ..+.|+.-+..|.++-.. ++...
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~-t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~ 81 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCS-THDLILFFTTQGRVYRAKAYDLPEASRTAR 81 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCSSSC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCcCCCccCC
Confidence 45677778888876653221 111 1122 223444444434 555566666677665444 33221
Q ss_pred -ee-eEEee-cCCCCEEEEEeec---CCCEEEEEeCCCeEEEEEccCCCccc----ceeeccCCCCCeeEEEecCCCCcE
Q 019847 135 -NV-TSCIK-AHSGEVCGLKWSN---EGNLLASGGDDNVVRIWERSKMSSSK----SLHRFTDHCGGVKALAWSPHQVNV 204 (335)
Q Consensus 135 -~~-~~~~~-~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~ 204 (335)
.. ...+. .....|..+..-+ +..+++..+.+|.++.-.+....... ....+.. .+.+..+........+
T Consensus 82 G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~i 160 (327)
T 3uc1_A 82 GQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDL 160 (327)
T ss_dssp CEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEE
T ss_pred CEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEE
Confidence 10 01111 1234555554333 57899999999999999876533221 1112222 3445555444444456
Q ss_pred EEEecCCCCCeEEEEECC--C---------CceEEEeecCCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCce
Q 019847 205 LATGGGREDGCIKIWNVQ--K---------GTCIHGIDAKAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTK 273 (335)
Q Consensus 205 ~~~~~g~~d~~i~i~d~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~ 273 (335)
+... ..|.+..+... . |.....+.....+.++...+.+.+++.. +..|.++.-.+.....
T Consensus 161 ll~T---~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~------T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 161 LLVS---ANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVA------TSGGYAKRTAIEEYPV 231 (327)
T ss_dssp EEEE---TTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEE------ETTSEEEEEEGGGSCB
T ss_pred EEEE---CCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEE------eCCCcEEEEEHHHccc
Confidence 6655 58888888766 2 1122223344556666555555555444 5688888776533221
Q ss_pred -------ee--cccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 274 -------VG--ELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 274 -------~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
+. .+..-.+.+..+....+...++..+.+|.+.-++...
T Consensus 232 ~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 232 QGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred cCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 11 2222123454444444445666677788887787654
No 374
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=71.52 E-value=42 Score=27.76 Aligned_cols=274 Identities=12% Similarity=0.146 Sum_probs=135.8
Q ss_pred ccceeeeecCCceEEEecCCeEEEEEecC-Cce--------eeEEeecC-CCCCceEEEEcCCCCEEEEEECC-CcEEEE
Q 019847 17 YYSKVIDWGRNNVLAVALGPVLFLWKWEN-GKV--------KKLLQVPG-EDDYPTSVSWSHDAKTLAVGYMD-SKLQLW 85 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~i~vw~~~~-~~~--------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-g~i~iw 85 (335)
..+..++-.....++...++.|+.|=... +++ .....+.. ....|..++.- ....++-..+ +.|+.|
T Consensus 16 ~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G--~~ht~al~~~gg~v~~w 93 (406)
T 4d9s_A 16 RKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG--ADHTVAYSQSGMEVYSW 93 (406)
T ss_dssp CCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTTTEEEEE
T ss_pred cceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeC--cceEEEEECCCCEEEEE
Confidence 45677887888888889999999996533 110 11111111 12346666543 3333434445 489999
Q ss_pred eCCCc-e----------eEeeecc-cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee----------eEEeec-
Q 019847 86 DAETS-K----------LVRNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV----------TSCIKA- 142 (335)
Q Consensus 86 ~~~~~-~----------~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~----------~~~~~~- 142 (335)
-.... + ....+.. ....|..++. .....+.-..+|.|+.|-.....++ ......
T Consensus 94 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~---G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 170 (406)
T 4d9s_A 94 GWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC---GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 170 (406)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred cCCCCcCCCCCCCCccccceEecccCCCCEEEEEE---ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc
Confidence 54321 0 0111111 1225666665 4455666678999999976533211 111111
Q ss_pred CCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc---------cceeeccCCCCCeeEEEecCCCCcEEEEecCCCC
Q 019847 143 HSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS---------KSLHRFTDHCGGVKALAWSPHQVNVLATGGGRED 213 (335)
Q Consensus 143 ~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d 213 (335)
....|..++.. ..+.+.-..+|.|+.|-....... .+..........|..++.... ..++.. .+
T Consensus 171 ~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~--ht~~l~---~~ 243 (406)
T 4d9s_A 171 EGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR--HTISVS---YS 243 (406)
T ss_dssp TTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSS--EEEEEE---TT
T ss_pred CCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCC--cEEEEc---CC
Confidence 12356666543 345666678999999964432110 001111111234656655433 233333 68
Q ss_pred CeEEEEECCCC-ce----------EEEeec--CCcEeEEEeCCCCceeeeeeeeeeecCCCeEEEEECCCCceee-----
Q 019847 214 GCIKIWNVQKG-TC----------IHGIDA--KAQICGLEWNRHHKEILSGHGFSASGDGNKLCLWKYPNMTKVG----- 275 (335)
Q Consensus 214 ~~i~i~d~~~~-~~----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~~----- 275 (335)
|.|+.|-.... ++ ...++. ...+..++.-..... +-..+|.+..|-....-++.
T Consensus 244 G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G~~hs~--------alt~~G~v~~wG~n~~GqLG~g~~~ 315 (406)
T 4d9s_A 244 GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTM--------ALTSDGKLYGWGWNKFGQVGVGNNL 315 (406)
T ss_dssp CCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEE--------EEETTSCEEEEECCTTSTTCSSSSS
T ss_pred CCEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEecCCEEE--------EEcCCCeEEEeeCCCCCCCCCCCCC
Confidence 99999964321 10 011111 122444433222221 22568899999654321110
Q ss_pred ------ccc-CCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 276 ------ELQ-SSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 276 ------~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
.+. .....|..++... ...+.-..||.|+.|=...
T Consensus 316 ~~~~p~~v~~~~~~~v~~va~G~--~hs~alt~~G~v~~wG~n~ 357 (406)
T 4d9s_A 316 DQCSPVQVRFPDDQKVVQVSCGW--RHTLAVTERNNVFAWGRGT 357 (406)
T ss_dssp CEEEEEEECCGGGCCEEEEEECS--SEEEEEETTSCEEEEECCT
T ss_pred CCccCEEEeccCCCcEEEEEeCC--CeEEEEeCCCCEEEecCCC
Confidence 011 1122455555433 3555566889999996543
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=70.81 E-value=17 Score=32.03 Aligned_cols=64 Identities=17% Similarity=0.110 Sum_probs=41.9
Q ss_pred EeEEEeCCCCceeeeeeeee------eecCCCeEEEEECCCCceeecccCC-CCceeEeEEcCCCCEEEEE
Q 019847 236 ICGLEWNRHHKEILSGHGFS------ASGDGNKLCLWKYPNMTKVGELQSS-NSRILDLSQSPDGLTVATA 299 (335)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~i~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~ 299 (335)
.-.|+|+|.|.+++.-..-. ..-..+.+.+.+..+++...-+..+ ..+++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 45689999998766532100 0001245666777777765555444 4589999999999988876
No 376
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=69.40 E-value=42 Score=26.86 Aligned_cols=148 Identities=7% Similarity=-0.015 Sum_probs=85.8
Q ss_pred cCCceEEEecCCeEEEEEecC---------Ccee-eEEeecCCCCCceEEEEcC---CCCEEEEEECCCcEEEEeCCC--
Q 019847 25 GRNNVLAVALGPVLFLWKWEN---------GKVK-KLLQVPGEDDYPTSVSWSH---DAKTLAVGYMDSKLQLWDAET-- 89 (335)
Q Consensus 25 ~~~~~~~~~~~~~i~vw~~~~---------~~~~-~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~-- 89 (335)
..+.++..+..|.++-+.... |... ..+.+. ....|..+..-+ ++.+++..+.+|.++--.+..
T Consensus 49 t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~ 127 (323)
T 1wp5_A 49 TKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYK 127 (323)
T ss_dssp TTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGC
T ss_pred CCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhh
Confidence 346788888888876666431 1110 112232 234555543333 266899999999999988742
Q ss_pred ------ceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee------eEEe-ecCCCCEEEEEeecCC
Q 019847 90 ------SKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV------TSCI-KAHSGEVCGLKWSNEG 156 (335)
Q Consensus 90 ------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~------~~~~-~~~~~~i~~~~~~~~~ 156 (335)
+.....+... +.+..+.... ..+.++..+.+|.+..+....-... .... ......|.++...+++
T Consensus 128 ~~~r~~G~~ai~l~e~-d~lv~~~~~~-~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~ 205 (323)
T 1wp5_A 128 AQRYSKPLTGINLKND-DQVVDVHLTD-GMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSK 205 (323)
T ss_dssp CSCCSSCEECSCCCTT-CCEEEEEEEC-SCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCT
T ss_pred hccccCceEEEEeCCC-CEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCC
Confidence 2222223322 4555555444 5567778888999888876531110 1111 1123456666554444
Q ss_pred C-EEEEEeCCCeEEEEEccC
Q 019847 157 N-LLASGGDDNVVRIWERSK 175 (335)
Q Consensus 157 ~-~l~~~~~dg~i~iwd~~~ 175 (335)
. .+++.+..|..+..++..
T Consensus 206 ~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 206 DESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp TCEEEEEETTSEEEEEEGGG
T ss_pred CcEEEEEECCCceEEEEHHH
Confidence 4 788888899988888764
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.20 E-value=27 Score=30.52 Aligned_cols=62 Identities=11% Similarity=0.191 Sum_probs=43.6
Q ss_pred CCeeEEEecCCCCcEEEEecCC---------CCCeEEEEECCCCceEEEeec--CCcEeEEEeCCCCceeeee
Q 019847 190 GGVKALAWSPHQVNVLATGGGR---------EDGCIKIWNVQKGTCIHGIDA--KAQICGLEWNRHHKEILSG 251 (335)
Q Consensus 190 ~~v~~~~~~~~~~~~~~~~~g~---------~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 251 (335)
.....|.|.++|..++.+-.+. ..+.+..++..+++....+.. ...++.++|+|+++.|++.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 3467899999996555454210 122677778778887666643 3578999999999998776
No 378
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=67.01 E-value=53 Score=27.18 Aligned_cols=190 Identities=10% Similarity=0.071 Sum_probs=100.2
Q ss_pred ccceeeeecCCceEEEecCCeEEEEEecC-Cce-----------eeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEE
Q 019847 17 YYSKVIDWGRNNVLAVALGPVLFLWKWEN-GKV-----------KKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQL 84 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~i~vw~~~~-~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 84 (335)
..+..++-.....++...+|.|+.|-... +++ .+. .+ .-...|..++. .....++-..||.|..
T Consensus 59 ~~i~~va~G~~hs~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~-~v-~l~~~i~~va~--G~~hs~alt~~G~v~~ 134 (413)
T 1a12_A 59 EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMVPG-KV-ELQEKVVQVSA--GDSHTAALTDDGRVFL 134 (413)
T ss_dssp SCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCCCSTTGGGSCE-EC-CCCSCEEEEEE--CSSEEEEEETTSCEEE
T ss_pred CCeEEEEeCCCeEEEEcCCCCEEEEECCCCCCCCCCCCCCccccCCe-Ee-cCCCcEEEEec--CCCeEEEEcCCCcEEE
Confidence 34566776777788888999999997543 110 111 11 11234555554 3345555567899999
Q ss_pred EeC--C-Ccee-----------EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeee-------------
Q 019847 85 WDA--E-TSKL-----------VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVT------------- 137 (335)
Q Consensus 85 w~~--~-~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~------------- 137 (335)
|-. . .+++ ...+ .....|..++. .....+.-..+|.|+.|-.....++-
T Consensus 135 wG~~~n~~GqlG~~~~~~~~~~P~~v-~~~~~i~~ia~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~ 210 (413)
T 1a12_A 135 WGSFRDNNGVIGLLEPMKKSMVPVQV-QLDVPVVKVAS---GNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ 210 (413)
T ss_dssp EECEEETTEEEESSBBTBCEEEEEEE-CCSSCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGG
T ss_pred eeCCcCCCCccCcCCccccccCCEEe-cCCCCEEEEEe---cCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccc
Confidence 964 2 1211 1111 12234555555 44555666788999999764322110
Q ss_pred --------EEeec------CCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCc-----------ccceeeccCCCCCe
Q 019847 138 --------SCIKA------HSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSS-----------SKSLHRFTDHCGGV 192 (335)
Q Consensus 138 --------~~~~~------~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~~~v 192 (335)
..... ....|..++.... +.+.-..||.|+.|-...... +..+..+......|
T Consensus 211 ~~~~~~~P~~v~~~~~g~~~~~~i~~ia~G~~--hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v 288 (413)
T 1a12_A 211 GLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY--FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSW 288 (413)
T ss_dssp GHHHHHSCEECCCBCSSCCSBCCEEEEEEETT--EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCE
T ss_pred cccccccCceEeeccccccCCccEEEEEeCCC--EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceE
Confidence 00000 2245666665543 444556799999997543211 01111111111346
Q ss_pred eEEEecCCCCcEEEEecCCCCCeEEEEEC
Q 019847 193 KALAWSPHQVNVLATGGGREDGCIKIWNV 221 (335)
Q Consensus 193 ~~~~~~~~~~~~~~~~~g~~d~~i~i~d~ 221 (335)
..++.-.. ..++.. .||.|+.|=.
T Consensus 289 ~~ia~G~~--hs~al~---~~G~v~~wG~ 312 (413)
T 1a12_A 289 VGFSGGQH--HTVCMD---SEGKAYSLGR 312 (413)
T ss_dssp EEEEECSS--EEEEEE---TTSCEEEEEC
T ss_pred EEEecccc--eEEEEe---CCCCEEEeeC
Confidence 66665443 233333 6899999964
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=65.84 E-value=48 Score=26.24 Aligned_cols=189 Identities=11% Similarity=0.072 Sum_probs=97.9
Q ss_pred CCCEEEEeeCCCcEEEEecccCCeeeE--------EeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCC------
Q 019847 112 NGHILTSGSKDKSIINHDVRVSNNVTS--------CIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMS------ 177 (335)
Q Consensus 112 ~~~~l~~~~~dg~i~~~d~~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------ 177 (335)
+...+++.+.+|.|+--.+..-..... .+. ....+..+........|+..+..|.++-+......
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~k-e~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIK-EEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeC-CCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 566788899999998776643221110 111 22344444444455667777888987766643211
Q ss_pred ccccee---eccCCCCCeeEEEec---CCCCcEEEEecCCCCCeEEEEECCC-------CceEEEeecCCcEeEEEeCCC
Q 019847 178 SSKSLH---RFTDHCGGVKALAWS---PHQVNVLATGGGREDGCIKIWNVQK-------GTCIHGIDAKAQICGLEWNRH 244 (335)
Q Consensus 178 ~~~~~~---~~~~~~~~v~~~~~~---~~~~~~~~~~~g~~d~~i~i~d~~~-------~~~~~~~~~~~~~~~~~~~~~ 244 (335)
.+.++. .+. ....|..+..- +++++++... .+|.++--.+.. +.....+..+..+..+.....
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T---~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~ 156 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMAT---ANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSG 156 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEE---TTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECT
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEe---CCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCC
Confidence 111111 122 33446555432 2344455444 799999887642 111122223344444443333
Q ss_pred CceeeeeeeeeeecCCCeEEEEECCCCce---------eecccCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCC
Q 019847 245 HKEILSGHGFSASGDGNKLCLWKYPNMTK---------VGELQSSNSRILDLSQSPDGLTVATAGADETIRFWEAFG 312 (335)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~i~i~d~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~ 312 (335)
...++.. +.+|.+..++...-.. ...+. ....|.++...+++..|++.+..|.++-.++..
T Consensus 157 ~~~i~l~------T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 157 EDEVMLF------SAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp TCEEEEE------ETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred CCEEEEE------CCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 3333332 5577777776543211 11222 234566665555566788889999999888754
No 380
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=62.61 E-value=65 Score=26.62 Aligned_cols=193 Identities=13% Similarity=0.082 Sum_probs=99.4
Q ss_pred ccceeeeecCCceEEEecCCeEEEEEecC-Cce--------eeEEeecC-CCCCceEEEEcCCCCEEEEEECCCcEEEEe
Q 019847 17 YYSKVIDWGRNNVLAVALGPVLFLWKWEN-GKV--------KKLLQVPG-EDDYPTSVSWSHDAKTLAVGYMDSKLQLWD 86 (335)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~i~vw~~~~-~~~--------~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 86 (335)
..+..++-.....++...+|.|+.|-... +++ .....+.. ....|..++- .....++-..+|.|+.|-
T Consensus 121 ~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~--G~~hs~alt~~G~v~~wG 198 (406)
T 4d9s_A 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA--GAEHTAAVTEDGDLYGWG 198 (406)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred CCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEec--CCCeEEEEeCCCCEEEee
Confidence 35667777778888889999999997543 111 01111111 1224555554 334555566899999996
Q ss_pred CCCc-e----------eEeeecc-cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee----------eEEee-cC
Q 019847 87 AETS-K----------LVRNLEG-HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV----------TSCIK-AH 143 (335)
Q Consensus 87 ~~~~-~----------~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~----------~~~~~-~~ 143 (335)
.... + ....+.. ....|..++. .....+.-..+|.|+.|-.....++ ...+. ..
T Consensus 199 ~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~---G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~ 275 (406)
T 4d9s_A 199 WGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVAC---GWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 275 (406)
T ss_dssp CCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEE---CSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGT
T ss_pred CCCCCCCCCCCCCCcCccEEecccCCceEEEEEE---CCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecccC
Confidence 4321 1 1111111 1234555554 4455556678899999975433211 11111 12
Q ss_pred CCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCcc---------cceeeccCCCCCeeEEEecCCCCcEEEEecCCCCC
Q 019847 144 SGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSS---------KSLHRFTDHCGGVKALAWSPHQVNVLATGGGREDG 214 (335)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~g~~d~ 214 (335)
...|..++.- ..+.+.-..||.|+.|-.+..... .+..........|..++.-.. ..++.. .+|
T Consensus 276 ~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G~~--hs~alt---~~G 348 (406)
T 4d9s_A 276 NSFISQISGG--WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWR--HTLAVT---ERN 348 (406)
T ss_dssp TSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEECSS--EEEEEE---TTS
T ss_pred CCCEEEEEec--CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeCCC--eEEEEe---CCC
Confidence 2346666543 345555678999999965432110 011111111234555554433 233333 588
Q ss_pred eEEEEEC
Q 019847 215 CIKIWNV 221 (335)
Q Consensus 215 ~i~i~d~ 221 (335)
.|+.|=.
T Consensus 349 ~v~~wG~ 355 (406)
T 4d9s_A 349 NVFAWGR 355 (406)
T ss_dssp CEEEEEC
T ss_pred CEEEecC
Confidence 8888864
No 381
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=62.29 E-value=96 Score=28.48 Aligned_cols=147 Identities=7% Similarity=-0.007 Sum_probs=74.1
Q ss_pred cccceeeeecC---CceEEEecCCeEEEEEecCCc-eeeEEeecC----CCCCceEEEEcCC-CCEEEEEECCCc----E
Q 019847 16 DYYSKVIDWGR---NNVLAVALGPVLFLWKWENGK-VKKLLQVPG----EDDYPTSVSWSHD-AKTLAVGYMDSK----L 82 (335)
Q Consensus 16 ~~~~~~~~~~~---~~~~~~~~~~~i~vw~~~~~~-~~~~~~~~~----~~~~v~~~~~~~~-~~~l~~~~~dg~----i 82 (335)
...+.+|.+++ +.+++++..+.|...+ +.++ ..++..... ....+.++++.|. .+.+.++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 45777888876 4577776667665554 3333 222111010 1246899999984 344555443311 3
Q ss_pred EEEeC-CCceeEeeecc---------cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCeeeEEeec------CCCC
Q 019847 83 QLWDA-ETSKLVRNLEG---------HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNVTSCIKA------HSGE 146 (335)
Q Consensus 83 ~iw~~-~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~------~~~~ 146 (335)
.||.. +.|+.=..+.. ....+..+++.|.+.+.++.+...+. +|....+.+--+.... ....
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCCC
Confidence 34433 33322111110 01135678888756677777764443 3333333222222211 1245
Q ss_pred EEEEEeec-CCCEEEEEeCC
Q 019847 147 VCGLKWSN-EGNLLASGGDD 165 (335)
Q Consensus 147 i~~~~~~~-~~~~l~~~~~d 165 (335)
+..+.++| ++..++++..+
T Consensus 171 ~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp EEEEEECTTSTTCEEEEESS
T ss_pred eEEEEECCCCCCEEEEEEcC
Confidence 78899988 44566666654
No 382
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=60.34 E-value=69 Score=26.20 Aligned_cols=193 Identities=11% Similarity=0.037 Sum_probs=101.5
Q ss_pred cCCCCCEEEEeeCCCcEEEEecccCC-------eeeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCC----
Q 019847 109 NHWNGHILTSGSKDKSIINHDVRVSN-------NVTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMS---- 177 (335)
Q Consensus 109 ~~~~~~~l~~~~~dg~i~~~d~~~~~-------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---- 177 (335)
-| +...+++.+.+|.|+--.+.... .....-......+..+........|+..+..|.++-+......
T Consensus 4 I~-~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IA-PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CC-CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred cc-CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 45 77899999999999987653211 1122222234566666665666677777888987766643211
Q ss_pred --ccccee---eccCCCCCeeEEEecC---CCCcEEEEecCCCCCeEEEEECCCCc-------eEEEeecCCcEeEEEeC
Q 019847 178 --SSKSLH---RFTDHCGGVKALAWSP---HQVNVLATGGGREDGCIKIWNVQKGT-------CIHGIDAKAQICGLEWN 242 (335)
Q Consensus 178 --~~~~~~---~~~~~~~~v~~~~~~~---~~~~~~~~~~g~~d~~i~i~d~~~~~-------~~~~~~~~~~~~~~~~~ 242 (335)
.+.++. .+. ....|.++...+ ++.+++.+. ..|.++...+.... ....+.....+..+...
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T---~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~ 158 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMAT---RNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALT 158 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEE---TTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEE
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEe---CCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEe
Confidence 111111 122 234555554322 233455544 79999988764322 11222223344443333
Q ss_pred CCCceeeeeeeeeeecCCCeEEEEECCCCcee---------ecccCCCCceeEeEEcC----------------------
Q 019847 243 RHHKEILSGHGFSASGDGNKLCLWKYPNMTKV---------GELQSSNSRILDLSQSP---------------------- 291 (335)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~i~i~d~~~~~~~---------~~~~~~~~~i~~~~~~~---------------------- 291 (335)
.....++.. +.+|.+..++...-... ..+. ....|.++...+
T Consensus 159 ~~~~~i~l~------T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 231 (370)
T 3l6v_A 159 DGDRDVLLF------ASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDESAEEVVETTD 231 (370)
T ss_dssp CSCCEEEEE------ETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC--------------------
T ss_pred CCCceEEEE------eCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccccccccccccc
Confidence 333333332 45677766665332211 1121 123455544433
Q ss_pred -------------CCCEEEEEeCCCcEEEEecCCC
Q 019847 292 -------------DGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 292 -------------~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
++..+++.+..|..+...+..-
T Consensus 232 g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~ 266 (370)
T 3l6v_A 232 GAEPAVIDVADNGDVAYILTATENGYGKRTPLAEY 266 (370)
T ss_dssp ---------------CEEEEEETTSEEEEEEGGGS
T ss_pred cccccccccccccCCceEEEeeCCCCEEEEEHHHh
Confidence 4568889999999998887653
No 383
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=59.96 E-value=80 Score=26.78 Aligned_cols=152 Identities=11% Similarity=0.041 Sum_probs=82.9
Q ss_pred cccceeeeecCCceEEEecCCeEEEEEec---CCce----------eeEEeecCC-CCCceEEEEcCCCCEEEEEECCCc
Q 019847 16 DYYSKVIDWGRNNVLAVALGPVLFLWKWE---NGKV----------KKLLQVPGE-DDYPTSVSWSHDAKTLAVGYMDSK 81 (335)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~i~vw~~~---~~~~----------~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~ 81 (335)
...+..++-.....++...+|.|+.|-.. .+++ .....++.- ...|..++. .....++-..+|.
T Consensus 147 ~~~i~~va~G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~--G~~hs~alt~~G~ 224 (473)
T 3of7_A 147 GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAP--GKDHILFLDEEGM 224 (473)
T ss_dssp TCCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEE--CSSEEEEEETTSC
T ss_pred CCcEEEEEccCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEe--cCCeEEEEeCCCe
Confidence 35677788788888888999999999751 1111 011111111 223655554 3445556668999
Q ss_pred EEEEeCCCc-eeEe---------eecc---cccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCee------------
Q 019847 82 LQLWDAETS-KLVR---------NLEG---HHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNNV------------ 136 (335)
Q Consensus 82 i~iw~~~~~-~~~~---------~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~------------ 136 (335)
|..|-.... ++-. .+.. ....|..++. .....++-..+|.|+.|-.....++
T Consensus 225 v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~---G~~hs~alt~~G~v~~wG~n~~GqlG~~~~~~~~~~~ 301 (473)
T 3of7_A 225 VFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIAS---GENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALV 301 (473)
T ss_dssp EEEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEE---CSSEEEEEETTSCEEEEEECTTSTTCCCSCCCTTCEE
T ss_pred EEEEeCCCCCCCCCCccccccccccCceecCCcceEEEec---CCCeEEEEecCCCEEEeCCCCCCCcCCCCcccCCcee
Confidence 999965431 1100 0000 0134555554 4455566677999999975432210
Q ss_pred --eEEee-cCCCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 137 --TSCIK-AHSGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 137 --~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
...+. .....|..++... .+-+.-..||.|+.|-..
T Consensus 302 ~~P~~v~~~~~~~i~~ia~G~--~hs~~lt~~G~v~~wG~n 340 (473)
T 3of7_A 302 TKPKRLALPDNVVIRSIAAGE--HHSLILSQDGDLYSCGRL 340 (473)
T ss_dssp EEEEECCCCTTCCEEEEEECS--SEEEEEETTSCEEEEEEC
T ss_pred eccccccccCCccEEEEEeCC--CeEEEEeCCCeEEEEECC
Confidence 01111 1123566666533 344555778999999754
No 384
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.14 E-value=31 Score=30.36 Aligned_cols=55 Identities=22% Similarity=0.297 Sum_probs=37.2
Q ss_pred eeecCCceEEEecCC--------------eEEEEEecCCceeeEEeecCCCCCceEEEEcCCCCEEEEEE
Q 019847 22 IDWGRNNVLAVALGP--------------VLFLWKWENGKVKKLLQVPGEDDYPTSVSWSHDAKTLAVGY 77 (335)
Q Consensus 22 ~~~~~~~~~~~~~~~--------------~i~vw~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 77 (335)
|.+++...|..+.|+ .+.+.+..+++..+...-+ ....++.++|+||++.|++.-
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEEE
Confidence 667775434444443 3556666778876665543 467899999999999887763
No 385
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=57.44 E-value=72 Score=25.48 Aligned_cols=234 Identities=9% Similarity=-0.001 Sum_probs=117.7
Q ss_pred CCCCEEEEEECCCcEEEEeCCCc----eeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEecc---cCC-----e
Q 019847 68 HDAKTLAVGYMDSKLQLWDAETS----KLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVR---VSN-----N 135 (335)
Q Consensus 68 ~~~~~l~~~~~dg~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~-----~ 135 (335)
|+..++++.+.+|.|+--.+..- .....++.. +.+..+.... ..+.|+..+..|.++-+... ... .
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~-t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~ 80 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMN-TKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQ 80 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCTTSCCE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEEC-CCCEEEEEECCCEEEEEEHHHCcCCCCCCCCc
Confidence 56677888899999887754321 111123322 3344444443 55666677778876655542 211 1
Q ss_pred -eeEEee-cCCCCEEEEEeec---CCCEEEEEeCCCeEEEEEccCCCccc-----ceeeccCCCCCeeEEEecCCCCcEE
Q 019847 136 -VTSCIK-AHSGEVCGLKWSN---EGNLLASGGDDNVVRIWERSKMSSSK-----SLHRFTDHCGGVKALAWSPHQVNVL 205 (335)
Q Consensus 136 -~~~~~~-~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~ 205 (335)
+...+. .....|.++..-+ ++.+++..+.+|.++.-.+....... ....+.. .+.+..+........++
T Consensus 81 ~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 81 HIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEE
T ss_pred ChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEE
Confidence 111111 1233455543333 25689999999999999876432211 1112222 24555554444444555
Q ss_pred EEecCCCCCeEEEEECCCC---------ceEEEeecCCcEeEEEeCCCCc-eeeeeeeeeeecCCCeEEEEECCCC----
Q 019847 206 ATGGGREDGCIKIWNVQKG---------TCIHGIDAKAQICGLEWNRHHK-EILSGHGFSASGDGNKLCLWKYPNM---- 271 (335)
Q Consensus 206 ~~~~g~~d~~i~i~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~i~d~~~~---- 271 (335)
... .+|.+..++...- .....+.....+.++...+.+. .++.. +..|..+..++...
T Consensus 160 l~T---~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~v------t~~G~gKr~~~~e~~~~~ 230 (323)
T 1wp5_A 160 LVT---HNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVA------TQRGAVKKMKLTEFEKAT 230 (323)
T ss_dssp EEE---TTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEE------ETTSEEEEEEGGGSCCCC
T ss_pred EEe---CCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEE------ECCCceEEEEHHHccccC
Confidence 554 5888888876421 1122223334455554433333 33333 45677666665331
Q ss_pred ---ceeecc---cCCCCceeEeEEcCCCCEEEEEeCCCcEEEEecCCC
Q 019847 272 ---TKVGEL---QSSNSRILDLSQSPDGLTVATAGADETIRFWEAFGP 313 (335)
Q Consensus 272 ---~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg~v~iw~~~~~ 313 (335)
+-+..+ +.....+..+....++..++..+.+|.+.-.++..-
T Consensus 231 Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~~i 278 (323)
T 1wp5_A 231 RAKRGVVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVGDI 278 (323)
T ss_dssp TTSCCEECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGGGS
T ss_pred CCCCCEECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhhhc
Confidence 111112 122224443332233345666777888777776653
No 386
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=53.81 E-value=90 Score=25.52 Aligned_cols=150 Identities=7% Similarity=-0.004 Sum_probs=82.6
Q ss_pred cCCCCEEEEEECCCcEEEEeCCC---------ceeEeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEec---ccCC
Q 019847 67 SHDAKTLAVGYMDSKLQLWDAET---------SKLVRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDV---RVSN 134 (335)
Q Consensus 67 ~~~~~~l~~~~~dg~i~iw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~---~~~~ 134 (335)
-|+..++++.+.+|.|+--.+.. +.....++ ....+..+.... ..+.|+..+..|.++-+.. +...
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 46778899999999998765421 12222333 234555555544 5566666777887665553 2211
Q ss_pred ------eeeEEee-cCCCCEEEEEeec---CCCEEEEEeCCCeEEEEEccCCCcc----cceeeccCCCCCeeEEEecCC
Q 019847 135 ------NVTSCIK-AHSGEVCGLKWSN---EGNLLASGGDDNVVRIWERSKMSSS----KSLHRFTDHCGGVKALAWSPH 200 (335)
Q Consensus 135 ------~~~~~~~-~~~~~i~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~~~~ 200 (335)
.+...+. .....|.++..-+ ++.+|+.++..|.++.-.+...... .....+.. .+.+..+.....
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 1111111 2234565554332 4568999999999999887653321 11112222 344444444444
Q ss_pred CCcEEEEecCCCCCeEEEEECC
Q 019847 201 QVNVLATGGGREDGCIKIWNVQ 222 (335)
Q Consensus 201 ~~~~~~~~~g~~d~~i~i~d~~ 222 (335)
...++... .+|.+..++..
T Consensus 161 ~~~i~l~T---~~G~~irf~~~ 179 (370)
T 3l6v_A 161 DRDVLLFA---SNGKTVRFGES 179 (370)
T ss_dssp CCEEEEEE---TTSEEEEEEGG
T ss_pred CceEEEEe---CCCeEEEEEcc
Confidence 44455554 57887777653
No 387
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=53.74 E-value=1.4e+02 Score=27.52 Aligned_cols=149 Identities=9% Similarity=0.003 Sum_probs=75.4
Q ss_pred CCCceEEEEcCC-CCEEEEEECCCcEEEEeCCCceeEeeecc-------cccceeEeeecCCCCCEEEEeeCCCc----E
Q 019847 58 DDYPTSVSWSHD-AKTLAVGYMDSKLQLWDAETSKLVRNLEG-------HHRRVATSSWNHWNGHILTSGSKDKS----I 125 (335)
Q Consensus 58 ~~~v~~~~~~~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~~~~~dg~----i 125 (335)
...|.+++++|. ...+.+++..+.|...+ +.++.=..+.. ....+.++++.|.+.+.++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 457999999995 45667777667665554 22322222221 12468999998855566665543321 3
Q ss_pred EEEecccCCeeeEEeec---------CCCCEEEEEeecC-CCEEEEEeCCCeEEEEEccCCCcccceeecc---CCCCCe
Q 019847 126 INHDVRVSNNVTSCIKA---------HSGEVCGLKWSNE-GNLLASGGDDNVVRIWERSKMSSSKSLHRFT---DHCGGV 192 (335)
Q Consensus 126 ~~~d~~~~~~~~~~~~~---------~~~~i~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~~~~v 192 (335)
.||.......--+.... ....+..+++.|. .+.+..+...+.|.. ....+...+.+.... .....+
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~-S~DgG~TW~~~~~~~~~~~~~~~~ 171 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWK-SSDRAKTWTNVTSIPDAFTNGIGY 171 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEE-ESSTTSSCEEETTSCCCCSTTTCE
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEE-ECCCCcccCCCccCccccCCCCCe
Confidence 44444333322222111 0113456788873 445666654443321 222233333332211 112457
Q ss_pred eEEEecCCCC-cEEEEe
Q 019847 193 KALAWSPHQV-NVLATG 208 (335)
Q Consensus 193 ~~~~~~~~~~-~~~~~~ 208 (335)
..+.++|... .+++..
T Consensus 172 ~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 172 TSVIFDPERNGTIYASA 188 (789)
T ss_dssp EEEEECTTSTTCEEEEE
T ss_pred EEEEECCCCCCEEEEEE
Confidence 8899988654 444443
No 388
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=51.75 E-value=1e+02 Score=25.52 Aligned_cols=148 Identities=11% Similarity=-0.007 Sum_probs=78.6
Q ss_pred cceeeeecCCceEEEecCCeEEEEEecC-Cc---------eeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEeC
Q 019847 18 YSKVIDWGRNNVLAVALGPVLFLWKWEN-GK---------VKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWDA 87 (335)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~i~vw~~~~-~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~ 87 (335)
....++.....-++...+|.|+.|=... ++ ......++. -..|..++. .+...++-..||.|..|-.
T Consensus 25 ~~~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~-l~~v~~va~--G~~h~~~l~~~G~v~~wG~ 101 (423)
T 3mvd_K 25 KRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAG-IPDAVDISA--GGMHNLVLTKSGDIYSFGC 101 (423)
T ss_dssp ----CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCS-CSSEEEEEE--CSSEEEEEETTSCEEEEEC
T ss_pred eeeEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccC-CCCceEEee--CCCeEEEEeCCCeEEEeEC
Confidence 3444565666666667888999995432 11 111112222 234555544 4556666678999999965
Q ss_pred CCc-ee------------EeeecccccceeEeeecCCCCCEEEEeeCCCcEEEEec--ccCCee---------eEEeecC
Q 019847 88 ETS-KL------------VRNLEGHHRRVATSSWNHWNGHILTSGSKDKSIINHDV--RVSNNV---------TSCIKAH 143 (335)
Q Consensus 88 ~~~-~~------------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~--~~~~~~---------~~~~~~~ 143 (335)
... ++ ...+. ....|..++. .....+.-..||.|+.|-. ....++ .......
T Consensus 102 n~~GqLG~~~~~~~~~~~P~~v~-~~~~i~~va~---G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~ 177 (423)
T 3mvd_K 102 NDEGALGRDTSEDGSESKPDLID-LPGKALCISA---GDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDLME 177 (423)
T ss_dssp CSSSTTCSCCCSTTSSSSCEECC-CSSCEEEEEE---CSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEESST
T ss_pred CCCcCCCCCCcCCccccCCeEEc-CCCCEEEEEc---CcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEecC
Confidence 321 10 01111 1234555555 4455566678999999985 322211 1111122
Q ss_pred CCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 144 SGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 144 ~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
...|..++.. ..+.+.-..||.|+.|-..
T Consensus 178 ~~~i~~va~G--~~hs~alt~~G~v~~wG~n 206 (423)
T 3mvd_K 178 GTVCCSIASG--ADHLVILTTAGKVFTVGCA 206 (423)
T ss_dssp TCCEEEEEEC--SSEEEEEETTSCEEEEECC
T ss_pred CCcEEEEecC--CCeEEEEecCCeEEEeeCC
Confidence 3456666654 3456666789999999643
No 389
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=50.55 E-value=1.5e+02 Score=26.98 Aligned_cols=105 Identities=8% Similarity=-0.050 Sum_probs=56.9
Q ss_pred CceEEEEcCCC-CEEEEEECCCcEEEEeCCCceeEeeeccc-------ccceeEeeecCCCCCEEEEeeCC-------Cc
Q 019847 60 YPTSVSWSHDA-KTLAVGYMDSKLQLWDAETSKLVRNLEGH-------HRRVATSSWNHWNGHILTSGSKD-------KS 124 (335)
Q Consensus 60 ~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~d-------g~ 124 (335)
.|..++++|.. ..+.++...|.|...+- .++.=..+..+ ...+.++++.|.+.+.++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D-~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDP-STETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEET-TTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCC-CCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 79999999963 56666765666665542 23222222211 24688999998665556555421 12
Q ss_pred EEEEecccCCeeeEEee-cCC--------CCEEEEEeec-CCCEEEEEeCC
Q 019847 125 IINHDVRVSNNVTSCIK-AHS--------GEVCGLKWSN-EGNLLASGGDD 165 (335)
Q Consensus 125 i~~~d~~~~~~~~~~~~-~~~--------~~i~~~~~~~-~~~~l~~~~~d 165 (335)
..+|....+..--+... ... ..+..|+++| +.+.+..+...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 45665544433222211 111 1246788888 44566666533
No 390
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=49.03 E-value=1.1e+02 Score=25.15 Aligned_cols=169 Identities=10% Similarity=0.087 Sum_probs=84.5
Q ss_pred cEEEEecccC--CeeeEEee-----cCCCCEEEEEee---cC----CCEEEEEe-CCCeEEEEEccCCCcccceeeccCC
Q 019847 124 SIINHDVRVS--NNVTSCIK-----AHSGEVCGLKWS---NE----GNLLASGG-DDNVVRIWERSKMSSSKSLHRFTDH 188 (335)
Q Consensus 124 ~i~~~d~~~~--~~~~~~~~-----~~~~~i~~~~~~---~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~ 188 (335)
.|.+||+.+. +.+.+... .....+..+++. |+ +.++..+. ..+.|.++|+.++...+.+......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4556666655 33222211 123457788877 22 33444443 4678999998876554433211101
Q ss_pred ---------------CCCeeEEEecCC----CCcEEEEecCCCCCeEEEEE---CCCC---ceEEEeecC---CcEeEEE
Q 019847 189 ---------------CGGVKALAWSPH----QVNVLATGGGREDGCIKIWN---VQKG---TCIHGIDAK---AQICGLE 240 (335)
Q Consensus 189 ---------------~~~v~~~~~~~~----~~~~~~~~~g~~d~~i~i~d---~~~~---~~~~~~~~~---~~~~~~~ 240 (335)
...+..++++|+ ++.+....- ....++-.. +++. ..++.+-.. .....++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl--ss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG--SAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES--SCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC--CCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 246778888887 555555542 222333322 1222 112222111 2344566
Q ss_pred eC-CCCceeeeeeeeeeecCCCeEEEEECCC-C---ceeeccc--CCCCceeEeEEcCCCCEEEEEe
Q 019847 241 WN-RHHKEILSGHGFSASGDGNKLCLWKYPN-M---TKVGELQ--SSNSRILDLSQSPDGLTVATAG 300 (335)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~~~~i~i~d~~~-~---~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~ 300 (335)
.+ .+|...++- -+.+.|..|+..+ . +....+. ..-..+.++.+.++|.+.+..+
T Consensus 282 ~D~~~G~ly~~~------~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 282 YDPKTKVIFFAE------ANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ECTTTCEEEEEE------SSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EeCCCCeEEEEe------ccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 65 455544433 5689999999865 1 1111111 1222466777777776555553
No 391
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=48.72 E-value=66 Score=27.62 Aligned_cols=56 Identities=13% Similarity=0.013 Sum_probs=34.5
Q ss_pred eEEEecCCeEEEEEec-CCc-------eeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEE
Q 019847 29 VLAVALGPVLFLWKWE-NGK-------VKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQL 84 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 84 (335)
++.++.+|.|.-.-+. .+. ....+.+.....+|..+.++++..+|.+++.++.++|
T Consensus 424 ~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 424 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4556677766444332 211 1222333234578999999999999999988776554
No 392
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=47.12 E-value=49 Score=28.79 Aligned_cols=56 Identities=11% Similarity=-0.029 Sum_probs=36.1
Q ss_pred eEEEecCCeEEEEEecCCc----eeeEEeecCCCCCce-EEEEcCCCCEEEEEECCCcEEE
Q 019847 29 VLAVALGPVLFLWKWENGK----VKKLLQVPGEDDYPT-SVSWSHDAKTLAVGYMDSKLQL 84 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~----~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i 84 (335)
++.++.+|.|.-..+.... ....+.+.....+|. .+.+++++.+|.+++.++.++|
T Consensus 416 ~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 416 VFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 5556778877666654331 233334433456785 8999999999999987654444
No 393
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=40.90 E-value=1.4e+02 Score=26.78 Aligned_cols=56 Identities=13% Similarity=0.059 Sum_probs=34.4
Q ss_pred eEEEecCCeEE-EEEecCCc-------eeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEE
Q 019847 29 VLAVALGPVLF-LWKWENGK-------VKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQL 84 (335)
Q Consensus 29 ~~~~~~~~~i~-vw~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 84 (335)
++.++.+|.|. +.....+. ....+.......+|..+.++++.++|.+++.++.++|
T Consensus 432 lFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 432 MFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 44566777664 33222211 1222333345678999999999999999988765554
No 394
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=40.25 E-value=1.6e+02 Score=24.37 Aligned_cols=190 Identities=9% Similarity=0.043 Sum_probs=99.0
Q ss_pred ceeeeecCCceEEEecCCeEEEEEecC-Cc-----------eeeEEeecCCCCCceEEEEcCCCCEEEEEECCCcEEEEe
Q 019847 19 SKVIDWGRNNVLAVALGPVLFLWKWEN-GK-----------VKKLLQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLWD 86 (335)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~i~vw~~~~-~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~ 86 (335)
+..++-.....++...+|.|+.|=... ++ ..+. .+. ....|..++. .....++-..||.|..|-
T Consensus 77 v~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~-~v~-~~~~i~~va~--G~~hs~al~~~G~v~~wG 152 (423)
T 3mvd_K 77 AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPD-LID-LPGKALCISA--GDSHSACLLEDGRVFAWG 152 (423)
T ss_dssp EEEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCE-ECC-CSSCEEEEEE--CSSEEEEEETTSCEEEEE
T ss_pred ceEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCe-EEc-CCCCEEEEEc--CcCeEEEEeCCCeEEEEe
Confidence 466777778888889999999997543 11 1111 111 1234555554 334455556899999997
Q ss_pred C--C-CceeE--------eee-cccccceeEeeecCCCCCEEEEeeCCCcEEEEecccCCe-------------------
Q 019847 87 A--E-TSKLV--------RNL-EGHHRRVATSSWNHWNGHILTSGSKDKSIINHDVRVSNN------------------- 135 (335)
Q Consensus 87 ~--~-~~~~~--------~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~------------------- 135 (335)
. . .+++- ... ......|..++. .....+.-..+|.|+.|-.....+
T Consensus 153 ~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~---G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~ 229 (423)
T 3mvd_K 153 SFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIAS---GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRD 229 (423)
T ss_dssp CEECSSSEEESBTTBCEEEEEESSTTCCEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTT
T ss_pred CCCCCCCCcCcCCCCCCceeeEecCCCcEEEEec---CCCeEEEEecCCeEEEeeCCcCCccCCCccccccccccccccc
Confidence 5 2 22211 000 112234556655 445566667899999996543221
Q ss_pred ---eeEEeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEccCCCccc--------ceeeccCCCCCeeEEEecCCCCcE
Q 019847 136 ---VTSCIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERSKMSSSK--------SLHRFTDHCGGVKALAWSPHQVNV 204 (335)
Q Consensus 136 ---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~~ 204 (335)
+..........|..++.... ..++.-..+|.|+.|-........ ...........|..++.-.. ..
T Consensus 230 ~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G~~--ht 306 (423)
T 3mvd_K 230 LLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQH--HT 306 (423)
T ss_dssp TSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEECSS--EE
T ss_pred ccCCeEEeecCCccEEEEEECCc-EEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcccC--eE
Confidence 11111122334566654422 233333578999999754321100 00111111345666665443 23
Q ss_pred EEEecCCCCCeEEEEEC
Q 019847 205 LATGGGREDGCIKIWNV 221 (335)
Q Consensus 205 ~~~~~g~~d~~i~i~d~ 221 (335)
++.. .||.|+.|=.
T Consensus 307 ~alt---~~G~v~~wG~ 320 (423)
T 3mvd_K 307 VILT---TDLKCSVVGR 320 (423)
T ss_dssp EEEE---TTCCEEEEEC
T ss_pred EEEe---CCCcEEEEEC
Confidence 3333 6899999964
No 395
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=35.73 E-value=1.4e+02 Score=25.65 Aligned_cols=57 Identities=9% Similarity=0.162 Sum_probs=36.9
Q ss_pred CEEEEeeCCCcEEEEecccCC-------eeeEEee--cCCCCEEEEEeecCCCEEEEEeCCCeEEE
Q 019847 114 HILTSGSKDKSIINHDVRVSN-------NVTSCIK--AHSGEVCGLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 114 ~~l~~~~~dg~i~~~d~~~~~-------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 170 (335)
..++.|+.+|.|.-.-+.... .+...+. ....+|..|.++++..+|.+++.++.+++
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 467788889977544332111 1222222 23578999999999999999998876655
No 396
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.53 E-value=1.5e+02 Score=26.15 Aligned_cols=57 Identities=9% Similarity=-0.090 Sum_probs=34.6
Q ss_pred eEEEecCCeEEEEEecCCc----eeeE--EeecCCCCCceEEEEcCCCCEEEEEECCCcEEEE
Q 019847 29 VLAVALGPVLFLWKWENGK----VKKL--LQVPGEDDYPTSVSWSHDAKTLAVGYMDSKLQLW 85 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~~----~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 85 (335)
++.++.+|.|.-.-..... .... +.......+|..+.++++...|.+++.++.++|-
T Consensus 383 lFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 383 LYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 4456677776544332211 1111 2222345789999999999999999877655553
No 397
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=28.92 E-value=2.2e+02 Score=25.56 Aligned_cols=57 Identities=11% Similarity=0.167 Sum_probs=37.3
Q ss_pred CEEEEeeCCCcEEEE-ecccCCeeeEEee--cCCCCEEEEEeecCC--CEEEEEeCCCeEEE
Q 019847 114 HILTSGSKDKSIINH-DVRVSNNVTSCIK--AHSGEVCGLKWSNEG--NLLASGGDDNVVRI 170 (335)
Q Consensus 114 ~~l~~~~~dg~i~~~-d~~~~~~~~~~~~--~~~~~i~~~~~~~~~--~~l~~~~~dg~i~i 170 (335)
..++.|+.+|.|.-. .......+..... ....+|..|.++++. .+|.+++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 478888999987543 3332222222222 235688899999987 89999887776665
No 398
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=27.25 E-value=1.7e+02 Score=25.43 Aligned_cols=56 Identities=7% Similarity=-0.070 Sum_probs=35.9
Q ss_pred eEEEecCCeEEEEEec-CC--ceeeEEeecCCCCCc-eEEEEcCCCCEEEEEECCCcEEEE
Q 019847 29 VLAVALGPVLFLWKWE-NG--KVKKLLQVPGEDDYP-TSVSWSHDAKTLAVGYMDSKLQLW 85 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~-~~--~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iw 85 (335)
++.++.+|.|.-.-+. .+ .....+.+ ....+| ..+.++++..+|.+++.++.++|-
T Consensus 403 ~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 403 AFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred EEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 4456678877654443 21 22334444 345677 489999999999999887766653
No 399
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=26.23 E-value=1.4e+02 Score=25.88 Aligned_cols=58 Identities=10% Similarity=0.097 Sum_probs=37.0
Q ss_pred CCEEEEeeCCCcEEEEecccCC---eeeEEee--cCCCCEE-EEEeecCCCEEEEEeCCCeEEE
Q 019847 113 GHILTSGSKDKSIINHDVRVSN---NVTSCIK--AHSGEVC-GLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 113 ~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~--~~~~~i~-~~~~~~~~~~l~~~~~dg~i~i 170 (335)
-..++.|+.+|.|.-..+.... .+...+. ....+|. .|.++++..+|.+++.++.+++
T Consensus 413 ~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 413 YSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4467788899987665554332 1222222 2245775 8889998899999887655554
No 400
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.56 E-value=3.7e+02 Score=24.14 Aligned_cols=56 Identities=11% Similarity=0.000 Sum_probs=34.2
Q ss_pred eEEEecCCeEEEE-EecCCc-eeeEEeecCCCCCceEEEEcCCC--CEEEEEECCCcEEE
Q 019847 29 VLAVALGPVLFLW-KWENGK-VKKLLQVPGEDDYPTSVSWSHDA--KTLAVGYMDSKLQL 84 (335)
Q Consensus 29 ~~~~~~~~~i~vw-~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i 84 (335)
++.++.+|.|.-. ...... .......-....+|..+.++++. .+|.+++.++.++|
T Consensus 418 ~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 418 MFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 5556677866443 332221 12222222345789999999987 89999887765554
No 401
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=25.50 E-value=3e+02 Score=23.16 Aligned_cols=153 Identities=9% Similarity=0.051 Sum_probs=83.7
Q ss_pred ccccceeeeecCCceEEEecCCeEEEEEecCC-cee-----e--------------------------EEeecC------
Q 019847 15 EDYYSKVIDWGRNNVLAVALGPVLFLWKWENG-KVK-----K--------------------------LLQVPG------ 56 (335)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~i~vw~~~~~-~~~-----~--------------------------~~~~~~------ 56 (335)
....+..++......++...+|.|+.|=.... ++- . ...++.
T Consensus 65 ~~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~ 144 (473)
T 3of7_A 65 DEAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPL 144 (473)
T ss_dssp TTTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHH
T ss_pred CCCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcc
Confidence 34567778888888888899999999965321 110 0 000110
Q ss_pred -CCCCceEEEEcCCCCEEEEEECCCcEEEEeCC---Ccee------------Eeeecc-cccceeEeeecCCCCCEEEEe
Q 019847 57 -EDDYPTSVSWSHDAKTLAVGYMDSKLQLWDAE---TSKL------------VRNLEG-HHRRVATSSWNHWNGHILTSG 119 (335)
Q Consensus 57 -~~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~---~~~~------------~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 119 (335)
....|..++. .....++-..+|.|+.|-.. .+++ ...+.. ....|..++. .....+.-
T Consensus 145 ~~~~~i~~va~--G~~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~---G~~hs~al 219 (473)
T 3of7_A 145 AEGHKVVQLAA--TDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAP---GKDHILFL 219 (473)
T ss_dssp HTTCCEEEEEE--CSSEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEE---CSSEEEEE
T ss_pred cCCCcEEEEEc--cCCEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEe---cCCeEEEE
Confidence 1234555554 33445555678999999741 1111 111111 1123666655 44566666
Q ss_pred eCCCcEEEEecccCCeeeE------------EeecCCCCEEEEEeecCCCEEEEEeCCCeEEEEEcc
Q 019847 120 SKDKSIINHDVRVSNNVTS------------CIKAHSGEVCGLKWSNEGNLLASGGDDNVVRIWERS 174 (335)
Q Consensus 120 ~~dg~i~~~d~~~~~~~~~------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~iwd~~ 174 (335)
..+|.|+.|-.....++-. ........|..++.. ..+.++-..+|.|+.|-.+
T Consensus 220 t~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~~~~v~~Ia~G--~~hs~alt~~G~v~~wG~n 284 (473)
T 3of7_A 220 DEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASG--ENHCFALTKDNKLVSWGLN 284 (473)
T ss_dssp ETTSCEEEEECCTTSTTSSCCCGGGTTTTCSCEECSCCSEEEEEEC--SSEEEEEETTSCEEEEEEC
T ss_pred eCCCeEEEEeCCCCCCCCCCccccccccccCceecCCcceEEEecC--CCeEEEEecCCCEEEeCCC
Confidence 7899999997643322100 000011456666543 3455556679999999754
No 402
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=25.39 E-value=3.8e+02 Score=24.27 Aligned_cols=105 Identities=10% Similarity=-0.029 Sum_probs=54.2
Q ss_pred cceeeeecC---CceEEEecCCeEEEEEecCCceeeEEeecC----CCCCceEEEEcC-CCCEEEEEECC-------CcE
Q 019847 18 YSKVIDWGR---NNVLAVALGPVLFLWKWENGKVKKLLQVPG----EDDYPTSVSWSH-DAKTLAVGYMD-------SKL 82 (335)
Q Consensus 18 ~~~~~~~~~---~~~~~~~~~~~i~vw~~~~~~~~~~~~~~~----~~~~v~~~~~~~-~~~~l~~~~~d-------g~i 82 (335)
.+..+++++ +.++++...+.|+..+-......++....+ ....|.+++++| +.+.++++... +..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 677788875 356666656666655432233333211111 124588999998 44455544321 124
Q ss_pred EEEeCCC-c---eeEee-ecc-----cccceeEeeecCCCCCEEEEeeCC
Q 019847 83 QLWDAET-S---KLVRN-LEG-----HHRRVATSSWNHWNGHILTSGSKD 122 (335)
Q Consensus 83 ~iw~~~~-~---~~~~~-~~~-----~~~~v~~~~~~~~~~~~l~~~~~d 122 (335)
.||.... | +.+.. +.. ....+..+++.|.+.+.++.+...
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 5554432 2 22221 110 011246789998777778777643
No 403
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=24.34 E-value=3.2e+02 Score=24.14 Aligned_cols=57 Identities=12% Similarity=0.062 Sum_probs=37.3
Q ss_pred CEEEEeeCCCcEEEEecccCC----e-eeEEee--cCCCCEEEEEeecCCCEEEEEeCCCeEEE
Q 019847 114 HILTSGSKDKSIINHDVRVSN----N-VTSCIK--AHSGEVCGLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 114 ~~l~~~~~dg~i~~~d~~~~~----~-~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 170 (335)
..++.|+.+|.|.-.-..... . ....+. ....+|..+.++++...|.+++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 467788899987644332222 1 112122 24568899999999899999887766665
No 404
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=22.59 E-value=2.2e+02 Score=25.64 Aligned_cols=57 Identities=11% Similarity=-0.058 Sum_probs=35.1
Q ss_pred eEEEecCCeEEEEEecCC----ceeeEEeecCCCCCc-eEEEEcCCCCEEEEEECCCcEEEE
Q 019847 29 VLAVALGPVLFLWKWENG----KVKKLLQVPGEDDYP-TSVSWSHDAKTLAVGYMDSKLQLW 85 (335)
Q Consensus 29 ~~~~~~~~~i~vw~~~~~----~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iw 85 (335)
++.++.+|.|.-.-+... .....+.+.....+| ..+.++++..+|.+++.++.++|-
T Consensus 415 lFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 415 VFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVP 476 (681)
T ss_dssp EEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred EEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEE
Confidence 455667887765544321 122233333245566 689999998899998877655553
No 405
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=21.58 E-value=3e+02 Score=24.78 Aligned_cols=57 Identities=11% Similarity=0.179 Sum_probs=36.6
Q ss_pred CEEEEeeCCCcEE-EEecccCC------eeeEE--eecCCCCEEEEEeecCCCEEEEEeCCCeEEE
Q 019847 114 HILTSGSKDKSII-NHDVRVSN------NVTSC--IKAHSGEVCGLKWSNEGNLLASGGDDNVVRI 170 (335)
Q Consensus 114 ~~l~~~~~dg~i~-~~d~~~~~------~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 170 (335)
..++.|+.+|.|. +....... .++.. ......+|..|.++++.++|.+++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677888999875 33222111 11211 1235678899999999999999998876665
Done!