Query 019849
Match_columns 335
No_of_seqs 187 out of 1119
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:01:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019849.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019849hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.2E-48 4.2E-53 376.5 23.4 276 45-333 5-335 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 4.4E-44 1.5E-48 344.2 25.3 270 47-333 8-321 (403)
3 2apr_A Rhizopuspepsin; hydrola 100.0 2.2E-44 7.4E-49 336.9 21.1 239 58-332 12-264 (325)
4 1t6e_X Xylanase inhibitor; two 100.0 4.8E-44 1.6E-48 341.5 20.9 266 48-333 2-305 (381)
5 3psg_A Pepsinogen; hydrolase(a 100.0 6E-44 2.1E-48 339.4 19.4 248 49-332 46-306 (370)
6 1am5_A Pepsin, acid proteinase 100.0 2.3E-43 7.7E-48 329.8 21.5 245 49-332 2-260 (324)
7 3c9x_A Trichoderma reesei aspa 100.0 5.4E-44 1.8E-48 334.8 16.8 242 58-332 12-266 (329)
8 2x0b_A Renin; hydrolase-hormon 100.0 1.3E-43 4.5E-48 338.2 17.8 245 48-332 50-315 (383)
9 1oew_A Endothiapepsin; hydrola 100.0 1.3E-43 4.4E-48 332.2 17.3 241 58-332 12-265 (329)
10 1tzs_A Cathepsin E; hydrolase, 100.0 5.5E-43 1.9E-47 330.7 21.3 244 49-332 13-274 (351)
11 1b5f_A Protein (cardosin A); h 100.0 1.9E-43 6.6E-48 316.6 16.3 221 50-301 4-238 (239)
12 1dpj_A Proteinase A; proteinas 100.0 2.7E-43 9.3E-48 329.9 18.0 244 50-332 4-265 (329)
13 1htr_B Gastricsin; aspartyl pr 100.0 3E-43 1E-47 329.6 17.4 244 50-332 4-264 (329)
14 1mpp_A Pepsin; hydrolase(acid 100.0 1.7E-42 5.7E-47 328.6 21.7 253 46-332 5-286 (361)
15 4aa9_A Chymosin; hydrolase, as 100.0 2.7E-43 9.3E-48 328.6 15.4 246 51-332 3-260 (320)
16 3cms_A Chymosin B; hydrolase, 100.0 4.4E-43 1.5E-47 327.8 16.4 245 49-332 4-263 (323)
17 1j71_A Candidapepsin, aspartic 100.0 1.6E-42 5.5E-47 325.4 18.7 242 48-332 2-264 (334)
18 3fv3_A SAPP1P-secreted asparti 100.0 3.6E-42 1.2E-46 323.5 20.5 243 48-332 2-270 (339)
19 2qzx_A Candidapepsin-5; aspart 100.0 4.1E-42 1.4E-46 323.6 19.6 244 48-332 2-266 (342)
20 1ibq_A Aspergillopepsin; aspar 100.0 6.5E-42 2.2E-46 320.1 19.5 239 58-332 11-261 (325)
21 3pvk_A Candidapepsin-2; hydrol 100.0 6.7E-42 2.3E-46 322.0 18.8 245 48-333 2-267 (342)
22 3k1w_A Renin; protease, altern 100.0 5.2E-42 1.8E-46 322.6 18.0 246 47-332 6-272 (341)
23 1miq_A Plasmepsin; aspartic pr 100.0 4.6E-42 1.6E-46 327.0 14.5 241 49-332 52-309 (375)
24 2bju_A Plasmepsin II; aspartic 100.0 1.2E-41 4.2E-46 330.2 15.8 242 50-332 129-385 (453)
25 2ewy_A Beta-secretase 2; BACE2 100.0 1.9E-40 6.4E-45 316.8 21.1 250 52-332 6-285 (383)
26 1izd_A Aspartic proteinase; su 100.0 2.5E-41 8.4E-46 315.9 14.3 238 59-332 13-261 (323)
27 2qp8_A Beta-secretase 1; BACE1 100.0 3.4E-40 1.2E-44 316.3 22.3 253 48-332 10-296 (395)
28 3vf3_A Beta-secretase 1; struc 100.0 9E-40 3.1E-44 314.1 24.9 245 59-333 26-304 (402)
29 1yg9_A Aspartic protease BLA G 100.0 4.3E-41 1.5E-45 315.2 15.2 248 48-332 6-269 (330)
30 1bxo_A Protein (penicillopepsi 100.0 3.2E-41 1.1E-45 315.1 13.2 236 59-332 13-260 (323)
31 3lpj_A Beta-secretase 1; alzhe 100.0 1E-39 3.5E-44 318.4 22.8 245 59-333 72-350 (455)
32 1qdm_A Prophytepsin; aspartic 100.0 2.6E-40 8.8E-45 323.7 18.4 223 48-301 41-281 (478)
33 3qvc_A Histo-aspartic protease 100.0 1.6E-40 5.6E-45 322.5 14.6 239 50-332 128-384 (451)
34 1wkr_A Polyporopepsin; hydrola 100.0 6.9E-39 2.4E-43 301.3 20.9 232 50-332 4-260 (340)
35 1lya_B Cathepsin D; lysosomal 99.9 1.9E-23 6.6E-28 186.7 10.8 157 166-332 2-173 (241)
36 1lya_A Cathepsin D; lysosomal 99.8 1.9E-21 6.4E-26 149.1 8.7 89 49-161 3-95 (97)
37 2i1a_A DNA damage-inducible pr 81.2 1.4 4.9E-05 34.9 4.0 32 59-92 23-54 (148)
38 3liy_A Protease; hydrolase, hy 81.1 1.6 5.6E-05 33.1 4.0 29 64-92 12-43 (116)
39 1fmb_A EIAV protease; hydrolas 79.8 2 6.8E-05 32.2 4.1 27 63-91 9-35 (104)
40 2hs1_A HIV-1 protease; ultra-h 79.2 2.5 8.7E-05 31.3 4.5 27 64-92 10-36 (99)
41 2i1a_A DNA damage-inducible pr 75.0 2.6 9E-05 33.2 3.9 29 262-295 31-59 (148)
42 3s8i_A Protein DDI1 homolog 1; 73.0 2.6 9E-05 33.6 3.4 29 262-295 29-57 (148)
43 3s8i_A Protein DDI1 homolog 1; 71.5 3.6 0.00012 32.8 3.9 31 60-92 22-52 (148)
44 3ec0_A Protease; HIV-2, inhibi 71.0 5.6 0.00019 29.4 4.5 27 64-92 10-36 (99)
45 2hah_A Protease, retropepsin; 66.3 5.9 0.0002 30.2 3.9 27 63-92 15-41 (116)
46 3sqf_A Protease; folded monome 59.2 11 0.00037 28.6 4.1 27 64-92 11-37 (114)
47 3slz_A GAG-Pro-POL polyprotein 48.9 17 0.00059 28.3 3.9 29 62-92 22-50 (132)
48 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.2 23 0.00079 29.7 3.9 28 63-92 9-36 (203)
49 2rsp_A RSV protease; hydrolase 41.1 22 0.00076 27.3 3.4 19 74-92 30-48 (124)
50 1bxo_A Protein (penicillopepsi 37.2 34 0.0012 30.4 4.6 42 239-291 4-45 (323)
51 1b5f_A Protein (cardosin A); h 37.1 28 0.00097 29.5 3.9 32 61-92 188-227 (239)
52 1t6e_X Xylanase inhibitor; two 36.9 27 0.00091 32.0 3.9 35 244-289 5-39 (381)
53 1mpp_A Pepsin; hydrolase(acid 36.4 36 0.0012 30.7 4.7 44 238-290 4-49 (361)
54 3cms_A Chymosin B; hydrolase, 36.3 37 0.0013 30.1 4.7 44 240-290 2-45 (323)
55 1lya_B Cathepsin D; lysosomal 33.6 37 0.0013 28.6 4.0 27 66-92 107-137 (241)
56 2apr_A Rhizopuspepsin; hydrola 31.4 43 0.0015 29.7 4.3 27 66-92 201-229 (325)
57 1oew_A Endothiapepsin; hydrola 30.7 55 0.0019 29.1 4.9 27 66-92 200-229 (329)
58 3vla_A EDGP; extracellular, in 30.6 45 0.0015 30.9 4.4 45 240-290 7-51 (413)
59 3c9x_A Trichoderma reesei aspa 29.6 51 0.0018 29.3 4.5 40 50-92 185-230 (329)
60 1izd_A Aspartic proteinase; su 29.5 39 0.0013 30.0 3.6 41 240-291 5-45 (323)
61 1ibq_A Aspergillopepsin; aspar 28.6 61 0.0021 28.7 4.8 32 61-92 188-225 (325)
62 3aup_A SBG7S, BG, basic 7S glo 28.1 56 0.0019 30.0 4.6 42 243-290 11-52 (403)
63 1j71_A Candidapepsin, aspartic 27.5 56 0.0019 29.1 4.3 39 244-290 5-43 (334)
64 3fv3_A SAPP1P-secreted asparti 26.9 58 0.002 28.9 4.3 40 243-290 4-43 (339)
65 1wkr_A Polyporopepsin; hydrola 26.7 61 0.0021 28.9 4.4 38 244-289 5-42 (340)
66 2qzx_A Candidapepsin-5; aspart 25.4 80 0.0027 28.1 5.0 39 244-290 5-43 (342)
67 3ka2_A [L-Ala51;Gly51']HIV-1 p 22.5 79 0.0027 26.4 3.9 28 63-92 113-140 (203)
68 1qdm_A Prophytepsin; aspartic 21.8 68 0.0023 30.4 3.9 32 61-92 231-270 (478)
69 2x0b_A Renin; hydrolase-hormon 20.6 70 0.0024 29.3 3.6 32 61-92 242-280 (383)
70 1htr_B Gastricsin; aspartyl pr 20.0 78 0.0027 28.0 3.7 32 61-92 189-228 (329)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.2e-48 Score=376.52 Aligned_cols=276 Identities=20% Similarity=0.301 Sum_probs=222.8
Q ss_pred CCCceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCC
Q 019849 45 FGSTAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFH 124 (335)
Q Consensus 45 ~~s~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~ 124 (335)
+.+.+.+|++++ ..+++|+++|.||||||++.|+|||||+++||+|. +| . ....|. .+.|.++.|...+
T Consensus 5 ~~~~~~~pv~~d-~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c---~--~Sst~~----~v~C~s~~C~~~~ 73 (413)
T 3vla_A 5 RPSALVVPVKKD-ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN---Y--VSSTYR----PVRCRTSQCSLSG 73 (413)
T ss_dssp CCSEEEEEEEEC-TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS---C--CCTTCE----ECBTTSHHHHHTT
T ss_pred CCccEEEEeeec-CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC---C--CCCCcC----ccCCCcccccccc
Confidence 466889999954 68999999999999999999999999999999998 65 2 112232 3899999998776
Q ss_pred CCCCC--------CCCCCCCCeeEEEe-CCCCeEEEEEEEEEEEeeccCCC-----cCCCceEEEeeeecCCCCCCCCCc
Q 019849 125 LPENI--------RCEANDQCDYEVLY-ADHGSSLGVLVTDHFPLRLTNGS-----LLGPRLIFGCGYNQRNPGPKPPPT 190 (335)
Q Consensus 125 ~~~~~--------~c~~~~~~~~~~~Y-~~Gs~~~G~~~~D~v~~~~~~g~-----~~~~~~~Fg~~~~~~~~~~~~~~~ 190 (335)
.+... .|. .+.|.|.+.| ++|+.+.|.+++|+|+|+..+|. ..++++.|||++....... ...+
T Consensus 74 ~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~ 151 (413)
T 3vla_A 74 SIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGV 151 (413)
T ss_dssp CCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTC
T ss_pred cCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccc
Confidence 55322 233 2579999999 58889999999999999765443 4678999999987532111 2568
Q ss_pred ceEEeeCCCCCchhhhhhhcCCcceeeeeeecc--CCCceEEeCCCCC-------CCCC-cEEEeCccCCC---------
Q 019849 191 AGVLGLGLGKASILSQLQSLGLTRNVLGHCLSV--RGGGYLFLGHDLV-------PSSG-IAWTPMSRDLL--------- 251 (335)
Q Consensus 191 ~GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~L~~--~~~G~l~~G~~~~-------~~g~-l~~~p~~~~~~--------- 251 (335)
|||||||++++|++.||..++.++++||+||.+ ...|+|+||+.+. ..++ +.|+|++.++.
T Consensus 152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~ 231 (413)
T 3vla_A 152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG 231 (413)
T ss_dssp CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence 999999999999999999998889999999985 4689999998863 2567 99999998742
Q ss_pred --CCceEEeeeEEEeCcEEcccc----------CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCc
Q 019849 252 --EKHYSSGPAELLFGGKSTGIK----------GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPV 319 (335)
Q Consensus 252 --~~~~~v~~~~i~v~g~~~~~~----------~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~ 319 (335)
..+|.|.+++|+||++.+.++ .+.+||||||++++||+++|++|.++|.+++..++++++.....++.
T Consensus 232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~ 311 (413)
T 3vla_A 232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGA 311 (413)
T ss_dssp CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSC
T ss_pred CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcc
Confidence 169999999999999988654 37899999999999999999999999999886444555433445789
Q ss_pred ccccC----------ccceeeeee
Q 019849 320 CWKGT----------WKCLLGNFE 333 (335)
Q Consensus 320 C~~~~----------~~~~~~~f~ 333 (335)
||+.+ .|.+.|+|.
T Consensus 312 C~~~~~~~~~~~~~~lP~i~f~f~ 335 (413)
T 3vla_A 312 CFSTDNILSTRLGPSVPSIDLVLQ 335 (413)
T ss_dssp EEECTTCCEETTEECCCCEEEECS
T ss_pred eeccCCccccccccCCCcEEEEEc
Confidence 99864 588999884
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=4.4e-44 Score=344.20 Aligned_cols=270 Identities=19% Similarity=0.332 Sum_probs=212.1
Q ss_pred CceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCC
Q 019849 47 STAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLP 126 (335)
Q Consensus 47 s~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~ 126 (335)
+.+.+||+++ +.+++|+++|.||||||++.|+|||||+++||+|. +| . ....|. .+.|.++.|...+.+
T Consensus 8 ~~~~~pl~~~-~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~~---~--~Sst~~----~~~C~s~~C~~~~~~ 76 (403)
T 3aup_A 8 NLVVLPVQND-GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQ---Y--SSKTYQ----APFCHSTQCSRANTH 76 (403)
T ss_dssp CCEEEEEEEC-TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SC---C--CCSSCB----CCCTTBHHHHHTTCC
T ss_pred ccEEEeeecC-CCCceEEEEEECCCCCceeEEEEECCCCceeECCC-CC---C--CCCCCC----ccCCCCccccCcccc
Confidence 6778999843 57899999999999999999999999999999998 54 2 122333 379999999876655
Q ss_pred C--------CCCCCCCCCCeeEEEeC-CCCeEEEEEEEEEEEeeccCCC-------cCCCceEEEeeeecCCC-CCCCCC
Q 019849 127 E--------NIRCEANDQCDYEVLYA-DHGSSLGVLVTDHFPLRLTNGS-------LLGPRLIFGCGYNQRNP-GPKPPP 189 (335)
Q Consensus 127 ~--------~~~c~~~~~~~~~~~Y~-~Gs~~~G~~~~D~v~~~~~~g~-------~~~~~~~Fg~~~~~~~~-~~~~~~ 189 (335)
. ...|. ...|.|.+.|+ +|+.+.|.+++|+|+|++.+|. ..++++.|||++..... +. ...
T Consensus 77 ~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~-~~~ 154 (403)
T 3aup_A 77 QCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGL-PRN 154 (403)
T ss_dssp CEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSS-STT
T ss_pred CccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCC-CCC
Confidence 2 12343 25899999998 7889999999999999754332 56789999999876432 22 356
Q ss_pred cceEEeeCCCCCchhhhhhhcCCcceeeeeeecc--CCCceEEeCCCCC--C--C-C-----CcEEEeCccCCCCCceEE
Q 019849 190 TAGVLGLGLGKASILSQLQSLGLTRNVLGHCLSV--RGGGYLFLGHDLV--P--S-S-----GIAWTPMSRDLLEKHYSS 257 (335)
Q Consensus 190 ~~GIlGLg~~~~s~~~ql~~~g~i~~~Fs~~L~~--~~~G~l~~G~~~~--~--~-g-----~l~~~p~~~~~~~~~~~v 257 (335)
.+||||||++..+++.||++..+.+++||+||.+ ...|.|+||+ +. . . | ++.|+|++.++. .+|.|
T Consensus 155 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~-~~y~v 232 (403)
T 3aup_A 155 TQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQ-GEYNV 232 (403)
T ss_dssp CCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTT-SCEEE
T ss_pred CceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCC-CcceE
Confidence 8999999999999999997654448999999986 5689999999 53 2 2 4 999999998742 59999
Q ss_pred eeeEEEeCcEEc-cccC----------ccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC--
Q 019849 258 GPAELLFGGKST-GIKG----------LQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT-- 324 (335)
Q Consensus 258 ~~~~i~v~g~~~-~~~~----------~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-- 324 (335)
.+++|+||++.+ .++. ..+||||||++++||+++|++|+++|.+++.. ++++.....++.||+-.
T Consensus 233 ~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~--~~~~~~~~~~~~c~~c~~~ 310 (403)
T 3aup_A 233 RVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPK--QAQVKSVAPFGLCFNSNKI 310 (403)
T ss_dssp CEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCG--GGEECCCTTCSCEECGGGC
T ss_pred EEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcc--ccccCCCCCCCceEECCCc
Confidence 999999999887 5421 35999999999999999999999999887753 23332233566899864
Q ss_pred --ccceeeeee
Q 019849 325 --WKCLLGNFE 333 (335)
Q Consensus 325 --~~~~~~~f~ 333 (335)
.|.+.|+|.
T Consensus 311 ~~~P~i~f~f~ 321 (403)
T 3aup_A 311 NAYPSVDLVMD 321 (403)
T ss_dssp CCCCCEEEEES
T ss_pred CcCCcEEEEEc
Confidence 488888883
No 3
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.2e-44 Score=336.92 Aligned_cols=239 Identities=24% Similarity=0.352 Sum_probs=200.1
Q ss_pred CCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCC
Q 019849 58 YPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQC 137 (335)
Q Consensus 58 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~ 137 (335)
..+.+|+++|.||||+|++.|+|||||+++||+|. +|..| .+.++.|+|++|+ +++. .+|
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~c-~~~~~~y~~~~Ss------T~~~------------~~~ 71 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIAST-LCTNC-GSGQTKYDPNQSS------TYQA------------DGR 71 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCSSC-CTTSCCBCGGGCT------TCEE------------EEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccC-CCchH-hcCCCCCCcccCC------Ceee------------CCC
Confidence 56789999999999999999999999999999999 99999 6778999998874 1111 468
Q ss_pred eeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC-------chhhhhhhc
Q 019849 138 DYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA-------SILSQLQSL 210 (335)
Q Consensus 138 ~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~-------s~~~ql~~~ 210 (335)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++...+.+. ....+||||||+... +++++|+++
T Consensus 72 ~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~f~-~~~~~GilGLg~~~~s~~~~~~~~~~~l~~q 146 (325)
T 2apr_A 72 TWSISYGDGSSASGILAKDNVNL----GGLLIKGQTIELAKREAASFA-SGPNDGLLGLGFDTITTVRGVKTPMDNLISQ 146 (325)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHH-TSSCSEEEECSCGGGCSSTTCCCHHHHHHHT
T ss_pred EEEEEECCCCCEEEEEEEEEEEE----CCEEECcEEEEEEeccCcccc-cCCCceEEEeCCcccccccCCCCHHHHHHhc
Confidence 99999999987999999999999 567888999999987654332 234899999998754 578999999
Q ss_pred CCc-ceeeeeeec---cCCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccc
Q 019849 211 GLT-RNVLGHCLS---VRGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSY 284 (335)
Q Consensus 211 g~i-~~~Fs~~L~---~~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~ 284 (335)
|+| +++||+||. ....|.|+||++|. ..|++.|+|+.... .+|.|.+++|+||+ .+...+..+||||||++
T Consensus 147 g~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~ 223 (325)
T 2apr_A 147 GLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSR--GWWGITVDRATVGT-STVASSFDGILDTGTTL 223 (325)
T ss_dssp TSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTT--SSCEEEECEEEETT-EEEECCEEEEECTTCSS
T ss_pred CCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCC--CEEEEEEeEEEECC-EecCCCceEEEecCCcc
Confidence 999 899999995 35689999999874 47999999997544 69999999999999 44445689999999999
Q ss_pred eeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-CcccccCccceeeee
Q 019849 285 TYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKGTWKCLLGNF 332 (335)
Q Consensus 285 ~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~f 332 (335)
++||+++|++++++|.+++... ..+ -.|+....|.+.|+|
T Consensus 224 ~~lP~~~~~~~~~~~~~~~~~~--------g~~~~~C~~~~~p~i~f~f 264 (325)
T 2apr_A 224 LILPNNIAASVARAYGASDNGD--------GTYTISCDTSAFKPLVFSI 264 (325)
T ss_dssp EEEEHHHHHHHHHHHTCEECSS--------SCEEECSCGGGCCCEEEEE
T ss_pred EECCHHHHHHHHHHHhcccCCC--------CeEEEECCCCCCCcEEEEE
Confidence 9999999999999998766532 112 259875579999998
No 4
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.8e-44 Score=341.54 Aligned_cols=266 Identities=18% Similarity=0.319 Sum_probs=207.9
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCC
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPE 127 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~ 127 (335)
++.+|++ +++.+.+|+++|+|||| |+|||||+++||+|. +|. .|. .++|.++.|...+.++
T Consensus 2 ~~~~pv~-~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~-~~~--------~~~----~~~C~s~~C~~~~~~~ 62 (381)
T 1t6e_X 2 PVLAPVT-KDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD-GGQ--------PPA----EIPCSSPTCLLANAYP 62 (381)
T ss_dssp CEEEEEE-ECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC-TTC--------CCC----CCBTTSHHHHHHHSSC
T ss_pred ceEEeEE-ecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC-CCC--------CCC----ccCCCCchhccccCCC
Confidence 4678898 45788999999999998 999999999999987 542 132 3789888897655544
Q ss_pred CCCCCCC--------CCC-eeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCce----EEEeeeecCCCCCCCCCcceEE
Q 019849 128 NIRCEAN--------DQC-DYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRL----IFGCGYNQRNPGPKPPPTAGVL 194 (335)
Q Consensus 128 ~~~c~~~--------~~~-~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~----~Fg~~~~~~~~~~~~~~~~GIl 194 (335)
...|... ..| .|.++|++|+.+.|.+++|+|+|+..+|+..++++ .|||++....... ...+||||
T Consensus 63 ~~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIl 141 (381)
T 1t6e_X 63 APGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVA 141 (381)
T ss_dssp CTTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEE
T ss_pred CCCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEE
Confidence 4456532 356 59999999977899999999999764444455554 5799987522111 25689999
Q ss_pred eeCCCCCchhhhhhhcCCcceeeeeeeccCCCceEEeCCCCC----CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEcc
Q 019849 195 GLGLGKASILSQLQSLGLTRNVLGHCLSVRGGGYLFLGHDLV----PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTG 270 (335)
Q Consensus 195 GLg~~~~s~~~ql~~~g~i~~~Fs~~L~~~~~G~l~~G~~~~----~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~ 270 (335)
|||++.++++.||+++++++++||+||.+...|+|+||+.+. ..+++.|+|++.++...+|.|.+++|+||++.+.
T Consensus 142 GLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~ 221 (381)
T 1t6e_X 142 GLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVP 221 (381)
T ss_dssp ECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECC
T ss_pred EeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEec
Confidence 999999999999999986799999999976789999999764 2689999999976432467799999999999886
Q ss_pred cc-----CccEEEeccccceeeCHHHHHHHHHHHHHHhcC-----CCCCCC-cCCCCcCcccccC----------cccee
Q 019849 271 IK-----GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKG-----KPLEDT-AEEKALPVCWKGT----------WKCLL 329 (335)
Q Consensus 271 ~~-----~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~-----~~~~~~-~~~~~~~~C~~~~----------~~~~~ 329 (335)
+. ++.+||||||++++||+++|++|.++|.+++.. .+++++ .....+..||+.+ .|.+.
T Consensus 222 ~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~ 301 (381)
T 1t6e_X 222 VPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQ 301 (381)
T ss_dssp CCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEE
T ss_pred CCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEE
Confidence 54 357999999999999999999999999998752 234443 2334568999754 48899
Q ss_pred eeee
Q 019849 330 GNFE 333 (335)
Q Consensus 330 ~~f~ 333 (335)
|+|.
T Consensus 302 f~f~ 305 (381)
T 1t6e_X 302 LGLD 305 (381)
T ss_dssp EEET
T ss_pred EEEC
Confidence 9983
No 5
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=6e-44 Score=339.45 Aligned_cols=248 Identities=20% Similarity=0.302 Sum_probs=202.2
Q ss_pred eeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCC
Q 019849 49 AVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPEN 128 (335)
Q Consensus 49 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~ 128 (335)
...||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|..|....++.|+|++|+ +++
T Consensus 46 ~~~~l~n--~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~-~C~~~~C~~~~~y~~~~Ss------T~~------- 109 (370)
T 3psg_A 46 GDEPLEN--YLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV-YCSSLACSDHNQFNPDDSS------TFE------- 109 (370)
T ss_dssp CCCTTGG--GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGTTSCCBCGGGCT------TCE-------
T ss_pred ceeccee--ccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC-CCCCcccCCCCCCCCccCc------CcE-------
Confidence 4567753 67889999999999999999999999999999999 9986555578899998874 111
Q ss_pred CCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC------c
Q 019849 129 IRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA------S 202 (335)
Q Consensus 129 ~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~------s 202 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+.......+|||||||++.. +
T Consensus 110 -----~~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 179 (370)
T 3psg_A 110 -----ATSQELSITYGTG-SMTGILGYDTVQV----GGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATP 179 (370)
T ss_dssp -----EEEEEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCC
T ss_pred -----ECCcEEEEEeCCc-eEEEEEEEEEEee----CCcccCCeEEEEEEeecccccccCCccceeccCCccccccCCCC
Confidence 1467999999999 5999999999999 6778899999999887653223456899999998864 5
Q ss_pred hhhhhhhcCCc-ceeeeeeeccC--CCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccc-cCccE
Q 019849 203 ILSQLQSLGLT-RNVLGHCLSVR--GGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGI-KGLQI 276 (335)
Q Consensus 203 ~~~ql~~~g~i-~~~Fs~~L~~~--~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~-~~~~~ 276 (335)
++++|+++|+| +++||+||.+. ..|.|+|||+|. ..|++.|+|+... .+|.|.+++|+++++.+.. .++.+
T Consensus 180 ~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~~~~~~a 256 (370)
T 3psg_A 180 VFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE---GYWQITLDSITMDGETIACSGGCQA 256 (370)
T ss_dssp HHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE---TTEEEEECEEESSSSEEECTTCEEE
T ss_pred HHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc---ceeEEEEeEEEECCEEEecCCCceE
Confidence 78899999999 89999999953 589999999875 4799999999876 5999999999999987654 45799
Q ss_pred EEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC-ccceeeee
Q 019849 277 IFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT-WKCLLGNF 332 (335)
Q Consensus 277 iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~f 332 (335)
||||||+++++|++++++|.++|.+.....+ .-.-.|.... .|.+.|+|
T Consensus 257 iiDTGTs~~~lP~~~~~~i~~~i~a~~~~~g-------~~~v~C~~~~~lP~i~f~~ 306 (370)
T 3psg_A 257 IVDTGTSLLTGPTSAIANIQSDIGASENSDG-------EMVISCSSIDSLPDIVFTI 306 (370)
T ss_dssp EECTTCCSEEEEHHHHHHHHHHTTCEECTTC-------CEECCGGGGGGCCCEEEEE
T ss_pred EEcCCCCcEECCHHHHHHHHHHhCCcccCCC-------cEEEECCCcccCCcEEEEE
Confidence 9999999999999999999988865432111 0112588764 58999988
No 6
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-43 Score=329.82 Aligned_cols=245 Identities=19% Similarity=0.341 Sum_probs=202.0
Q ss_pred eeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCCC
Q 019849 49 AVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHLP 126 (335)
Q Consensus 49 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~ 126 (335)
+.+||++ +.+.+|+++|.||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 2 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~----- 65 (324)
T 1am5_A 2 VTEQMKN--EADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS-HCSAQACS--NHNKFKPRQSS------TYV----- 65 (324)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT-TCCSHHHH--TSCCBCGGGCT------TCE-----
T ss_pred ceeeeec--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccc--CCCcCCCccCC------CeE-----
Confidence 3568874 57889999999999999999999999999999998 897 465 46889998874 111
Q ss_pred CCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC-----
Q 019849 127 ENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA----- 201 (335)
Q Consensus 127 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~----- 201 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+........+||||||++..
T Consensus 66 -------~~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 133 (324)
T 1am5_A 66 -------ETGKTVDLTYGTG-GMRGILGQDTVSV----GGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGA 133 (324)
T ss_dssp -------EEEEEEEEECSSC-EEEEEEEEEEEES----SSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGC
T ss_pred -------eCCcEEEEEECCC-CeEEEEEECceeE----CCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCC
Confidence 1468999999999 6799999999999 5678889999999987654333467899999999854
Q ss_pred -chhhhhhhcCCc-ceeeeeeeccC--CCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCcc
Q 019849 202 -SILSQLQSLGLT-RNVLGHCLSVR--GGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQ 275 (335)
Q Consensus 202 -s~~~ql~~~g~i-~~~Fs~~L~~~--~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~ 275 (335)
+++++|+++|+| +++||+||.+. ..|.|+||++|. ..|++.|+|+... .+|.|.+++|+++++.+...+..
T Consensus 134 ~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~ 210 (324)
T 1am5_A 134 VPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE---KYWQVALDGITVNGQTAACEGCQ 210 (324)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE---TTEEEEECEEEETTEECCCCCEE
T ss_pred CchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC---cEEEEEEeEEEECCceeeccCce
Confidence 578899999999 89999999854 489999999874 4799999999865 59999999999999886444489
Q ss_pred EEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCccccc-Cccceeeee
Q 019849 276 IIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKG-TWKCLLGNF 332 (335)
Q Consensus 276 ~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~-~~~~~~~~f 332 (335)
+||||||+++++|+++|++|.++|.+. ...+ .-...|++. ..|.+.|+|
T Consensus 211 aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~~g-------~~~~~C~~~~~~P~i~f~f 260 (324)
T 1am5_A 211 AIVDTGTSKIVAPVSALANIMKDIGAS-ENQG-------EMMGNCASVQSLPDITFTI 260 (324)
T ss_dssp EEECTTCSSEEECTTTHHHHHHHHTCE-ECCC-------CEECCTTSSSSSCCEEEEE
T ss_pred EEEecCCccEECCHHHHHHHHHHhCCc-ccCC-------cEEEeCCCcccCCcEEEEE
Confidence 999999999999999999999998755 2111 112369885 468999988
No 7
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=5.4e-44 Score=334.79 Aligned_cols=242 Identities=16% Similarity=0.223 Sum_probs=196.6
Q ss_pred CCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCC
Q 019849 58 YPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQC 137 (335)
Q Consensus 58 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~ 137 (335)
+.+.+|+++|.||||+|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ +|+. -.+|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~~~~~y~~~~Ss------T~~~-----------~~~~ 73 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSS-ETPKSSATGHAIYTPSKSS------TSKK-----------VSGA 73 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCGGGCT------TCEE-----------CTTC
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecC-CCCccccCCCCcCCcccCc------CceE-----------cCCC
Confidence 56789999999999999999999999999999999 9998877778999998874 2221 1358
Q ss_pred eeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC---------chhhhhh
Q 019849 138 DYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA---------SILSQLQ 208 (335)
Q Consensus 138 ~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~---------s~~~ql~ 208 (335)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++...+.+......+||||||++.. +++++|+
T Consensus 74 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 149 (329)
T 3c9x_A 74 SWSISYGDGSSSSGDVYTDKVTI----GGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAA 149 (329)
T ss_dssp BEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHH
T ss_pred eEEEEeCCCCcEEEEEEEEEEEE----CCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHH
Confidence 99999999977999999999999 5678899999999976543221245899999998753 4677888
Q ss_pred hcCCc-ceeeeeeeccCCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccce
Q 019849 209 SLGLT-RNVLGHCLSVRGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYT 285 (335)
Q Consensus 209 ~~g~i-~~~Fs~~L~~~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~ 285 (335)
++ | +++||+||.+...|.|+||++|. ..|++.|+|+.... .+|.|.+++|+++++.+...+..+||||||+++
T Consensus 150 ~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 225 (329)
T 3c9x_A 150 SS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQ--GFWEFTASGYSVGGGKLNRNSIDGIADTGTTLL 225 (329)
T ss_dssp TT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTT--SSCEEEECCEEETTCCCCSCCEEEEECTTCCSE
T ss_pred Hh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCC--ceEEEEEeeEEECCEeccCCCceEEEECCCCcE
Confidence 76 6 89999999987899999999874 47999999998544 699999999999998876556899999999999
Q ss_pred eeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-CcccccCccceeeee
Q 019849 286 YFNSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKGTWKCLLGNF 332 (335)
Q Consensus 286 ~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~f 332 (335)
+||+++|++|.++|....... ....+ -.|+ ...|.+.|+|
T Consensus 226 ~lp~~~~~~i~~~i~~a~~~~------~~~~~~~~C~-~~~P~i~f~f 266 (329)
T 3c9x_A 226 LLDDNVVDAYYANVQSAQYDN------QQEGVVFDCD-EDLPSFSFGV 266 (329)
T ss_dssp EECHHHHHHHHTTCTTCEEET------TTTEEEEETT-CCCCCEEEEE
T ss_pred eCCHHHHHHHHHhCCCcEEcC------CCCEEEEECC-CCCCcEEEEE
Confidence 999999999888764222110 11112 2598 3568999988
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=338.16 Aligned_cols=245 Identities=18% Similarity=0.301 Sum_probs=199.8
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCcccCCccccCCC
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT----GCTLPPESLYHPKNNLVACNDPFCSAF 123 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~----~C~~~~~~~y~p~~S~v~c~~~~C~~~ 123 (335)
....||.+ +.+.+|+++|+||||||+|.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 50 ~~~~~l~n--~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~-~C~~~~~~C~--~~~~y~~~~Ss------T~~-- 116 (383)
T 2x0b_A 50 TSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYK-- 116 (383)
T ss_dssp -CEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTSHHHH--TSCCBCGGGCT------TCE--
T ss_pred cceEeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc-CCCCCccccc--CCCCCCCCCCC------cEE--
Confidence 34578874 67889999999999999999999999999999999 895 576 46889998874 121
Q ss_pred CCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC--
Q 019849 124 HLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA-- 201 (335)
Q Consensus 124 ~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~-- 201 (335)
..+|.|.++|++| ++.|.+++|+|+| |+..++ +.|||++...+.......+|||||||++..
T Consensus 117 ----------~~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~ 180 (383)
T 2x0b_A 117 ----------HNGTELTLRYSTG-TVSGFLSQDIITV----GGITVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAI 180 (383)
T ss_dssp ----------EEEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCG
T ss_pred ----------ECCcEEEEEcCCc-cEEEEEEeeEEEE----cCceEE-EEEEEEEecCCcccccCCCceEeccCCCcccc
Confidence 1468999999999 5999999999999 567788 999999987542212356899999999864
Q ss_pred ----chhhhhhhcCCc-ceeeeeeeccC------CCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEE
Q 019849 202 ----SILSQLQSLGLT-RNVLGHCLSVR------GGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKS 268 (335)
Q Consensus 202 ----s~~~ql~~~g~i-~~~Fs~~L~~~------~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~ 268 (335)
+++++|++||+| +++||+||.+. ..|.|+|||+|.. .|++.|+|+... .+|.|.+++|+++++.
T Consensus 181 ~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~---~~w~v~l~~i~v~~~~ 257 (383)
T 2x0b_A 181 GRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---GVWQIQMKGVSVGSST 257 (383)
T ss_dssp GGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST---TSCEEEECEEEESSCC
T ss_pred CCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC---ceEEEEEeEEEeCCce
Confidence 477899999999 89999999853 3899999999753 689999999865 5999999999999987
Q ss_pred cc-ccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC-ccceeeee
Q 019849 269 TG-IKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT-WKCLLGNF 332 (335)
Q Consensus 269 ~~-~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~f 332 (335)
+. ..++.+||||||+++++|+++|++|.++|.+.. ..+ .- .-.|++.. .|.+.|+|
T Consensus 258 ~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-~~g------~~-~v~C~~~~~~P~i~f~~ 315 (383)
T 2x0b_A 258 LLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-RLF------DY-VVKCNEGPTLPDISFHL 315 (383)
T ss_dssp CBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-CSS------CE-EEEGGGTTTCCCEEEEE
T ss_pred EEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-cCC------cE-EEeccccccCceEEEEE
Confidence 43 345899999999999999999999999986543 111 11 12599864 59999988
No 9
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.3e-43 Score=332.21 Aligned_cols=241 Identities=17% Similarity=0.236 Sum_probs=194.1
Q ss_pred CCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCC
Q 019849 58 YPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQC 137 (335)
Q Consensus 58 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~ 137 (335)
..+.+|+++|.||||+|++.|+|||||+++||+|. +|..|.. .++.|+|++|+ +++. -.+|
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~-~~~~y~~~~Ss------T~~~-----------~~~~ 72 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSS-ETTASEV-XQTIYTPSKST------TAKL-----------LSGA 72 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBT-TSCGGGC--CCCBCGGGCT------TCEE-----------EEEE
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecC-CCCcccc-ccCccCCccCc------ccee-----------cCCC
Confidence 46789999999999999999999999999999999 9988876 78899998874 1111 0357
Q ss_pred eeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC---------chhhhhh
Q 019849 138 DYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA---------SILSQLQ 208 (335)
Q Consensus 138 ~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~---------s~~~ql~ 208 (335)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++...+.+......+||||||++.. +++++|+
T Consensus 73 ~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~ 148 (329)
T 1oew_A 73 TWSISYGDGSSSSGDVYTDTVSV----GGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAK 148 (329)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHT
T ss_pred eEEEEeCCCCcEEEEEEEEEEEE----CCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHH
Confidence 99999999977999999999999 5778899999999976543221235899999998753 4678888
Q ss_pred hcCCc-ceeeeeeeccCCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccce
Q 019849 209 SLGLT-RNVLGHCLSVRGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYT 285 (335)
Q Consensus 209 ~~g~i-~~~Fs~~L~~~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~ 285 (335)
++ | +++||+||.+...|.|+||++|. ..|++.|+|+.... .+|.|.+++|+|+++.+...+..+||||||+++
T Consensus 149 ~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~ 224 (329)
T 1oew_A 149 AS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQ--GFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLL 224 (329)
T ss_dssp TT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTT--SSCEEEEEEEEETTSCCEEEEEEEEECTTCCSE
T ss_pred Hh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCC--ceEEEEEeeEEECCeeccCCCceEEEeCCCCCE
Confidence 76 6 89999999987799999999874 47999999998544 699999999999998775556799999999999
Q ss_pred eeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-CcccccCccceeeee
Q 019849 286 YFNSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKGTWKCLLGNF 332 (335)
Q Consensus 286 ~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~f 332 (335)
++|+++|++|+++|....... ....+ -.|+. ..|.+.|+|
T Consensus 225 ~lP~~~~~~l~~~i~~a~~~~------~~g~~~~~C~~-~~P~i~f~f 265 (329)
T 1oew_A 225 YLPATVVSAYWAQVSGAKSSS------SVGGYVFPCSA-TLPSFTFGV 265 (329)
T ss_dssp EECHHHHHHHHTTSTTCEEET------TTTEEEEETTC-CCCCEEEEE
T ss_pred ECCHHHHHHHHHhCCCcEEcC------CCCEEEEECCC-CCCcEEEEE
Confidence 999999999988774221110 11111 35983 568999988
No 10
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.5e-43 Score=330.73 Aligned_cols=244 Identities=21% Similarity=0.302 Sum_probs=200.2
Q ss_pred eeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCCC
Q 019849 49 AVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHLP 126 (335)
Q Consensus 49 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~ 126 (335)
..+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 13 ~~~~l~n--~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~----- 76 (351)
T 1tzs_A 13 AKEPLIN--YLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV-YCTSPACK--THSRFQPSQSS------TYS----- 76 (351)
T ss_dssp -CCTTGG--GSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCB-----
T ss_pred cceecee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC-CCCccccC--CCCcCCcccCc------ceE-----
Confidence 4567763 56789999999999999999999999999999999 897 675 57899998874 222
Q ss_pred CCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC-----
Q 019849 127 ENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA----- 201 (335)
Q Consensus 127 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~----- 201 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+........+||||||++..
T Consensus 77 -------~~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 144 (351)
T 1tzs_A 77 -------QPGQSFSIQYGTG-SLSGIIGADQVSV----EGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGV 144 (351)
T ss_dssp -------CCSCEEEEESSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGC
T ss_pred -------ECCCEEEEEeCCC-CeEEEEEEeEEEE----CCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCC
Confidence 1578999999999 5899999999999 5778889999999876553222356899999999864
Q ss_pred -chhhhhhhcCCc-ceeeeeeeccCC----CceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEcc-cc
Q 019849 202 -SILSQLQSLGLT-RNVLGHCLSVRG----GGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTG-IK 272 (335)
Q Consensus 202 -s~~~ql~~~g~i-~~~Fs~~L~~~~----~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~-~~ 272 (335)
+++.+|+++|+| +++||+||.+.. .|.|+|||+|. ..|++.|+|+... .+|.|.+++|+|+++.+. ..
T Consensus 145 ~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~ 221 (351)
T 1tzs_A 145 TPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ---AYWQIALDNIQVGGTVMFCSE 221 (351)
T ss_dssp CCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE---TTEEEEEEEEEETTEEEECTT
T ss_pred CcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC---ceEEEEeCEEEECCceEEcCC
Confidence 478899999999 899999998542 79999999874 4799999999865 599999999999998753 34
Q ss_pred CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-CcccccC-ccceeeee
Q 019849 273 GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKGT-WKCLLGNF 332 (335)
Q Consensus 273 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~-~~~~~~~f 332 (335)
+..+||||||+++++|+++|++|.++|.+.... ..+ -.|++.. .|.+.|+|
T Consensus 222 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~---------g~~~~~C~~~~~~P~i~f~f 274 (351)
T 1tzs_A 222 GCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVD---------GEYAVECANLNVMPDVTFTI 274 (351)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHHTCEECS---------SSEEECGGGGGGSCCEEEEE
T ss_pred CceEEeccCCcceeCCHHHHHHHHHHhCCcccC---------CeEEEeCCCCccCCcEEEEE
Confidence 578999999999999999999999988643321 112 2599854 68999988
No 11
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-43 Score=316.61 Aligned_cols=221 Identities=23% Similarity=0.334 Sum_probs=184.9
Q ss_pred eeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCcccCCccccCCCCCC
Q 019849 50 VFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT---GCTLPPESLYHPKNNLVACNDPFCSAFHLP 126 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~---~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~ 126 (335)
.+||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++.
T Consensus 4 ~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~~C~--~~~~y~~~~Ss------T~~~---- 68 (239)
T 1b5f_A 4 VVALTN--DRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSS-KCINSKACR--AHSMYESSDSS------TYKE---- 68 (239)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSCHHHH--TSCCBCGGGCT------TCEE----
T ss_pred eeeeee--cCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcC-CCCCCcccC--CCCCCCCccCC------Ceee----
Confidence 467764 56789999999999999999999999999999998 896 576 36789998874 1111
Q ss_pred CCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCCc--hh
Q 019849 127 ENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKAS--IL 204 (335)
Q Consensus 127 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~s--~~ 204 (335)
.+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||+....+........+||||||++..+ ++
T Consensus 69 --------~~~~~~i~Yg~G-s~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~ 135 (239)
T 1b5f_A 69 --------NGTFGAIIYGTG-SITGFFSQDSVTI----GDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVW 135 (239)
T ss_dssp --------EEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHH
T ss_pred --------CCcEEEEEECCC-cEEEEEEEEEEEE----CCcEEccEEEEEEEeccCccccccCcceEEecCccccccHHH
Confidence 357899999999 5899999999999 56778899999998764321113468999999999866 56
Q ss_pred hhhhhcCCc-ceeeeeeecc----CCCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccc--cCcc
Q 019849 205 SQLQSLGLT-RNVLGHCLSV----RGGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGI--KGLQ 275 (335)
Q Consensus 205 ~ql~~~g~i-~~~Fs~~L~~----~~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~--~~~~ 275 (335)
.+|+++++| +++||+||.+ ...|.|+||++|.. .|++.|+|+... .+|.|.+++|+|+++.+.. .+..
T Consensus 136 ~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~~ 212 (239)
T 1b5f_A 136 YNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ---YYWQFGIGDVLIGDKSTGFCAPGCQ 212 (239)
T ss_dssp HHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE---TTEEEEECCEEETTEECCTTTTCEE
T ss_pred HHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC---CeEEEEeeEEEECCEEecccCCCCE
Confidence 789999999 8999999985 35899999998753 689999999865 5999999999999998753 3578
Q ss_pred EEEeccccceeeCHHHHHHHHHHHHH
Q 019849 276 IIFDSGSSYTYFNSQAYKTTLDLMRK 301 (335)
Q Consensus 276 ~iiDSGTs~~~lp~~~~~~l~~~i~~ 301 (335)
+||||||+++++|+++|++|.++|.+
T Consensus 213 aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 213 AFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp EEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred EEEecCcchhhCCHHHHHHHHHHhCC
Confidence 99999999999999999999988753
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.7e-43 Score=329.94 Aligned_cols=244 Identities=20% Similarity=0.295 Sum_probs=199.5
Q ss_pred eeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCC--CCCCCCCCCCCCCCcccCCccccCCCCCCC
Q 019849 50 VFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTG--CTLPPESLYHPKNNLVACNDPFCSAFHLPE 127 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~--C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~ 127 (335)
.+||++ +.+.+|+++|.||||+|++.|+|||||+++||+|. +|.. |. .++.|+|++|+ +++
T Consensus 4 ~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~------ 66 (329)
T 1dpj_A 4 DVPLTN--YLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSN-ECGSLACF--LHSKYDHEASS------SYK------ 66 (329)
T ss_dssp EEECEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCE------
T ss_pred ceeeee--cCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecC-CCCCcccC--CcCcCCcccCc------CeE------
Confidence 567764 46789999999999999999999999999999999 8986 64 46789998874 111
Q ss_pred CCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCCc-----
Q 019849 128 NIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKAS----- 202 (335)
Q Consensus 128 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~s----- 202 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+........+||||||++..+
T Consensus 67 ------~~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~ 135 (329)
T 1dpj_A 67 ------ANGTEFAIQYGTG-SLEGYISQDTLSI----GDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVV 135 (329)
T ss_dssp ------EEEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCC
T ss_pred ------ECCcEEEEEECCc-eEEEEEEEEEEEE----CCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCC
Confidence 1468999999999 8999999999999 57788999999998765411113468999999998654
Q ss_pred -hhhhhhhcCCc-ceeeeeeeccC-----CCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccC
Q 019849 203 -ILSQLQSLGLT-RNVLGHCLSVR-----GGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKG 273 (335)
Q Consensus 203 -~~~ql~~~g~i-~~~Fs~~L~~~-----~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~ 273 (335)
++.+|+++|+| +++||+||.+. ..|.|+||++|. ..|++.|+|+... .+|.|.+++|+++++.+...+
T Consensus 136 ~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~ 212 (329)
T 1dpj_A 136 PPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK---AYWEVKFEGIGLGDEYAELES 212 (329)
T ss_dssp CHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTEEEECSS
T ss_pred CHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC---ceEEEEeeeEEECCeEecCCC
Confidence 56789999999 89999999743 379999999875 3689999999865 599999999999999886667
Q ss_pred ccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcC-cccccC-ccceeeee
Q 019849 274 LQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALP-VCWKGT-WKCLLGNF 332 (335)
Q Consensus 274 ~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~C~~~~-~~~~~~~f 332 (335)
..+||||||+++++|+++|++|.++|.+... ....+. .|.... .|.+.|+|
T Consensus 213 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~--------~~g~~~~~C~~~~~~P~i~f~f 265 (329)
T 1dpj_A 213 HGAAIDTGTSLITLPSGLAEMINAEIGAKKG--------WTGQYTLDCNTRDNLPDLIFNF 265 (329)
T ss_dssp CEEEECTTCSCEEECHHHHHHHHHHHTCEEC--------TTSSEEECGGGGGGCCCEEEEE
T ss_pred ccEEeeCCCCcEECCHHHHHHHHHHhCCccC--------CCCeEEEECCCCCcCCcEEEEE
Confidence 8999999999999999999999998864311 111222 588753 58999998
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=3e-43 Score=329.65 Aligned_cols=244 Identities=24% Similarity=0.358 Sum_probs=198.9
Q ss_pred eeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCCCC
Q 019849 50 VFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHLPE 127 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~ 127 (335)
.+||+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++
T Consensus 4 ~~~l~---~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~------ 65 (329)
T 1htr_B 4 YEPMA---YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV-YCQSQACT--SHSRFNPSESS------TYS------ 65 (329)
T ss_dssp CCGGG---GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCE------
T ss_pred eeeeE---EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCCcccC--CCCcCCCccCC------CeE------
Confidence 35664 57789999999999999999999999999999999 897 475 47889998874 121
Q ss_pred CCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC------
Q 019849 128 NIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA------ 201 (335)
Q Consensus 128 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~------ 201 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+........+||||||++..
T Consensus 66 ------~~~~~~~i~Yg~g-s~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 134 (329)
T 1htr_B 66 ------TNGQTFSLQYGSG-SLTGFFGYDTLTV----QSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEAT 134 (329)
T ss_dssp ------EEEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCC
T ss_pred ------ECCcEEEEEeCCC-CeEEEEEeeeEEE----cceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCC
Confidence 1468999999999 5799999999999 5778899999999876553222356899999999864
Q ss_pred chhhhhhhcCCc-ceeeeeeeccCC---CceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEcc--ccC
Q 019849 202 SILSQLQSLGLT-RNVLGHCLSVRG---GGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTG--IKG 273 (335)
Q Consensus 202 s~~~ql~~~g~i-~~~Fs~~L~~~~---~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~--~~~ 273 (335)
+++++|+++|+| +++||+||.+.. .|.|+||++|.. .|++.|+|+... .+|.|.+++|+++++.+. ..+
T Consensus 135 ~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~ 211 (329)
T 1htr_B 135 TAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE---LYWQIGIEEFLIGGQASGWCSEG 211 (329)
T ss_dssp SHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS---SSCEEEECEEEETTEECCTTTTC
T ss_pred CHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC---ceEEEEEeEEEECCceeeecCCC
Confidence 578899999999 899999998643 799999998753 689999999865 599999999999998764 345
Q ss_pred ccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC-ccceeeee
Q 019849 274 LQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT-WKCLLGNF 332 (335)
Q Consensus 274 ~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~f 332 (335)
..+||||||++++||+++|++|.++|.+..... . .-.-.|++.. .|.+.|+|
T Consensus 212 ~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~~------g-~~~~~C~~~~~~P~i~f~f 264 (329)
T 1htr_B 212 CQAIVDTGTSLLTVPQQYMSALLQATGAQEDEY------G-QFLVNCNSIQNLPSLTFII 264 (329)
T ss_dssp EEEEECTTCCSEEEEGGGHHHHHHHHTCEECTT------S-CEEECGGGGGGSCCEEEEE
T ss_pred ceEEEecCCccEECCHHHHHHHHHHhCCeecCC------C-eEEEeCCCcccCCcEEEEE
Confidence 799999999999999999999999886543211 0 1123599854 59999998
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.7e-42 Score=328.56 Aligned_cols=253 Identities=18% Similarity=0.286 Sum_probs=204.8
Q ss_pred CCceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCcccCCccccCC
Q 019849 46 GSTAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT---GCTLPPESLYHPKNNLVACNDPFCSA 122 (335)
Q Consensus 46 ~s~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~---~C~~~~~~~y~p~~S~v~c~~~~C~~ 122 (335)
++....||.+ +.+.+|+++|.||||+|++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++.
T Consensus 5 g~~~~~~l~~--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~C~--~~~~y~~~~Ss------T~~~ 73 (361)
T 1mpp_A 5 GSVDTPGLYD--FDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHK-GCDNSEGCV--GKRFFDPSSSS------TFKE 73 (361)
T ss_dssp CCEEEEEEEE--TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCGGGTCC--SSCCBCGGGCT------TCEE
T ss_pred CccceEEeec--CCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCC-CCCCCccCC--CCCcCCCccCC------ceEe
Confidence 4455788974 57789999999999999999999999999999999 898 786 47889998874 1211
Q ss_pred CCCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCC-----CCCCCCCcceEEeeC
Q 019849 123 FHLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRN-----PGPKPPPTAGVLGLG 197 (335)
Q Consensus 123 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~-----~~~~~~~~~GIlGLg 197 (335)
.+|.|.+.|++|+ +.|.+++|+|+| ++..++++.|||++...+ ........+||||||
T Consensus 74 ------------~~~~~~i~Yg~Gs-~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg 136 (361)
T 1mpp_A 74 ------------TDYNLNITYGTGG-ANGIYFRDSITV----GGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAA 136 (361)
T ss_dssp ------------EEEEEEEECSSCE-EEEEEEEEEEEE----TTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECS
T ss_pred ------------cCCeEEEEECCce-EEEEEEEEEEEE----CCEEEeceEEEEEEeccCccccccccccCCCCCEEEeC
Confidence 4689999999994 899999999999 577889999999998754 222245689999999
Q ss_pred CCC------------CchhhhhhhcCCc-ceeeeeeeccC-CCceEEeCCCCC--CCCCcEEEeCccCCC-CCceEEeee
Q 019849 198 LGK------------ASILSQLQSLGLT-RNVLGHCLSVR-GGGYLFLGHDLV--PSSGIAWTPMSRDLL-EKHYSSGPA 260 (335)
Q Consensus 198 ~~~------------~s~~~ql~~~g~i-~~~Fs~~L~~~-~~G~l~~G~~~~--~~g~l~~~p~~~~~~-~~~~~v~~~ 260 (335)
++. .+++.+|+++|+| +++||+||.+. ..|.|+||++|. ..|++.|+|+..... ..+|.|.++
T Consensus 137 ~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~ 216 (361)
T 1mpp_A 137 YPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVT 216 (361)
T ss_dssp CGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEE
T ss_pred CcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEe
Confidence 874 4567799999999 89999999964 589999999874 479999999987641 128999999
Q ss_pred EEEeCcEEccc-cCccEE-EeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCccccc-Cc-cceeeee
Q 019849 261 ELLFGGKSTGI-KGLQII-FDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKG-TW-KCLLGNF 332 (335)
Q Consensus 261 ~i~v~g~~~~~-~~~~~i-iDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~-~~-~~~~~~f 332 (335)
+|+|+++.+.. .+..+| |||||++++||+++|++|.++|.+... .. ...-...|++. .. |.+.|+|
T Consensus 217 ~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~-----~~-~g~~~~~C~~~~~~~p~i~f~f 286 (361)
T 1mpp_A 217 GVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT-----ES-QQGYTVPCSKYQDSKTTFSLVL 286 (361)
T ss_dssp EEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE-----EE-TTEEEEEHHHHTTCCCEEEEEE
T ss_pred EEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc-----CC-CCcEEEECCCcccCCCcEEEEE
Confidence 99999987642 347899 999999999999999999999865422 11 01112369975 45 8999988
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.7e-43 Score=328.62 Aligned_cols=246 Identities=19% Similarity=0.258 Sum_probs=197.1
Q ss_pred eeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCC
Q 019849 51 FPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIR 130 (335)
Q Consensus 51 ~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~ 130 (335)
.||.+ +.+.+|+++|+||||||+++|+|||||+++||+|. +|..|....++.|+|++|+ +++
T Consensus 3 ~~l~n--~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~-~C~~~~C~~~~~y~~~~Ss------T~~--------- 64 (320)
T 4aa9_A 3 EPLTS--YLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI-YCKSNVCKNHHRFDPRKSS------TFR--------- 64 (320)
T ss_dssp -------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHHTSCCBCGGGCT------TCE---------
T ss_pred cccee--ccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC-CCCccccCCCCCCCCCCCc------CeE---------
Confidence 46653 56889999999999999999999999999999999 8974333357899998874 111
Q ss_pred CCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCC------Cchh
Q 019849 131 CEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGK------ASIL 204 (335)
Q Consensus 131 c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~------~s~~ 204 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+........+||||||++. .+++
T Consensus 65 ---~~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~ 136 (320)
T 4aa9_A 65 ---NLGKPLSIHYGTG-SMEGFLGYDTVTV----SNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVF 136 (320)
T ss_dssp ---EEEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHH
T ss_pred ---cCCcEEEEEECCc-EEEEEEEEEEEEE----CCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHH
Confidence 1468999999999 5899999999999 577889999999988765211134579999999874 4588
Q ss_pred hhhhhcCCc-ceeeeeeecc-CCCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccc-cCccEEEe
Q 019849 205 SQLQSLGLT-RNVLGHCLSV-RGGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGI-KGLQIIFD 279 (335)
Q Consensus 205 ~ql~~~g~i-~~~Fs~~L~~-~~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~-~~~~~iiD 279 (335)
++|+++|+| +++||+||.+ ...|.|+|||+|.. .|++.|+|+... .+|.|.+++|+++++.+.. .+..++||
T Consensus 137 ~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~~~~~~iiD 213 (320)
T 4aa9_A 137 DNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ---QYWQFTVDSVTINGVAVACVGGCQAILD 213 (320)
T ss_dssp HHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB---TTBEEEECEEEETTEEEESTTCEEEEEC
T ss_pred HHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC---CceEEEEeEEEECCEEeccCCCcEEEEE
Confidence 999999999 9999999997 47899999998753 689999999865 5999999999999988754 35799999
Q ss_pred ccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC-ccceeeee
Q 019849 280 SGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT-WKCLLGNF 332 (335)
Q Consensus 280 SGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~f 332 (335)
|||+++++|++++++|.++|.+.....+ .-.-.|.... .|.+.|+|
T Consensus 214 sGtt~~~lP~~~~~~i~~~~~~~~~~~g-------~~~~~C~~~~~~p~i~f~f 260 (320)
T 4aa9_A 214 TGTSVLFGPSSDILKIQMAIGATENRYG-------EFDVNCGNLRSMPTVVFEI 260 (320)
T ss_dssp TTCSSEEEEHHHHHHHHHHTTCEECTTS-------CEEECGGGGGGCCCEEEEE
T ss_pred CCCCcEECCHHHHHHHHHHhCCcccCCC-------cEEEeCCCCCcCceEEEEE
Confidence 9999999999999999998854432111 0112588764 58899988
No 16
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=4.4e-43 Score=327.79 Aligned_cols=245 Identities=17% Similarity=0.257 Sum_probs=199.4
Q ss_pred eeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCC--CCCCCCCCCCCCCCCCcccCCccccCCCCCC
Q 019849 49 AVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPC--TGCTLPPESLYHPKNNLVACNDPFCSAFHLP 126 (335)
Q Consensus 49 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c--~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~ 126 (335)
...||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +| ..|. .++.|+|++|+ +++
T Consensus 4 ~~~~l~n--~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~----- 67 (323)
T 3cms_A 4 ASVPLTN--YLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI-YCKSNACK--NHQRFDPRKSS------TFQ----- 67 (323)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSHHHH--TSCCBCGGGCT------TCE-----
T ss_pred ceeeeEe--ccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC-CCCccccc--CCCCCCCccCC------CeE-----
Confidence 3568874 57789999999999999999999999999999999 89 4675 57889998874 121
Q ss_pred CCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCC------
Q 019849 127 ENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGK------ 200 (335)
Q Consensus 127 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~------ 200 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..++++.|||++...+........+||||||++.
T Consensus 68 -------~~~~~~~i~Yg~G-s~~G~~~~D~v~i----g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 135 (323)
T 3cms_A 68 -------NLGKPLSIHYGTG-SMQGILGYDTVTV----SNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYS 135 (323)
T ss_dssp -------EEEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTC
T ss_pred -------ECCcEEEEEeCCC-CeEEEEEEEEEEE----CCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCC
Confidence 1468999999999 5899999999999 577888999999988654211123579999999875
Q ss_pred CchhhhhhhcCCc-ceeeeeeeccC-CCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccc-cCcc
Q 019849 201 ASILSQLQSLGLT-RNVLGHCLSVR-GGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGI-KGLQ 275 (335)
Q Consensus 201 ~s~~~ql~~~g~i-~~~Fs~~L~~~-~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~-~~~~ 275 (335)
.+++++|+++|+| +++||+||.+. ..|.|+||++|.. .|++.|+|+... .+|.|.+++|+++++.+.. .+..
T Consensus 136 ~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~ 212 (323)
T 3cms_A 136 IPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ---QYWQFTVDSVTISGVVVACEGGCQ 212 (323)
T ss_dssp CCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB---TTBEEEEEEEEETTEEEESTTCEE
T ss_pred CCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC---CeEEEEEeeEEECCEEeecCCCcE
Confidence 3578899999999 89999999853 4599999998753 689999999865 5999999999999988753 3579
Q ss_pred EEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-Cccccc-Cccceeeee
Q 019849 276 IIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKG-TWKCLLGNF 332 (335)
Q Consensus 276 ~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~-~~~~~~~~f 332 (335)
+||||||+++++|+++|++|.++|.+.... ...+ -.|++. ..|.+.|+|
T Consensus 213 aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~--------~g~~~~~C~~~~~~P~i~f~f 263 (323)
T 3cms_A 213 AILDTGTSKLVGPSSDILNIQQAIGATQNQ--------YGEFDIDCDNLSYMPTVVFEI 263 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHHHHTCEEET--------TTEEEECTTCTTTSCCEEEEE
T ss_pred EEEecCCccEeCCHHHHHHHHHHhCCeecC--------CCcEEEECCCCccCceEEEEE
Confidence 999999999999999999999988643211 1112 259985 459999998
No 17
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.6e-42 Score=325.41 Aligned_cols=242 Identities=19% Similarity=0.296 Sum_probs=195.4
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCC-CCCCCC-------CCCCCCCCCCCCcccCCccc
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNA-PCTGCT-------LPPESLYHPKNNLVACNDPF 119 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~-~c~~C~-------~~~~~~y~p~~S~v~c~~~~ 119 (335)
.+.+||.. .+.+|+++|.||||+|++.|+|||||+++||+|.. +|..|. ...++.|+|++|+ +
T Consensus 2 ~~~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------T 72 (334)
T 1j71_A 2 DVPTTLIN---EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSS------S 72 (334)
T ss_dssp CEEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCT------T
T ss_pred ceeEEEec---CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCC------C
Confidence 56788874 36799999999999999999999999999998640 354331 1245677777663 1
Q ss_pred cCCCCCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCC
Q 019849 120 CSAFHLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLG 199 (335)
Q Consensus 120 C~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~ 199 (335)
++ ..+|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++... ..+||||||++
T Consensus 73 ~~------------~~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~~~~~~fg~~~~~~-------~~~GilGLg~~ 129 (334)
T 1j71_A 73 AQ------------NLNQDFSIEYGDLTSSQGSFYKDTVGF----GGISIKNQQFADVTTTS-------VDQGIMGIGFT 129 (334)
T ss_dssp CE------------EEEEEEEEEBTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES-------SSSCEEECSCG
T ss_pred cc------------cCCCceEEEECCCCEEEEEEEEEEEEE----CCEEEccEEEEEEEecC-------CCccEEEEcCC
Confidence 11 146899999999988899999999999 56788999999998763 38999999997
Q ss_pred CC--------chhhhhhhcCCc-ceeeeeeecc--CCCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCc
Q 019849 200 KA--------SILSQLQSLGLT-RNVLGHCLSV--RGGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGG 266 (335)
Q Consensus 200 ~~--------s~~~ql~~~g~i-~~~Fs~~L~~--~~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g 266 (335)
.. +++.+|+++|+| +++||+||.+ ...|.|+|||+|.. .|++.|+|+... .+|.|.+++|++++
T Consensus 130 ~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g 206 (334)
T 1j71_A 130 ADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS---VELRVHLGSINFDG 206 (334)
T ss_dssp GGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS---SSCEEEEEEEEETT
T ss_pred cccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC---CeEEEEEeEEEECC
Confidence 53 789999999999 8999999985 46899999998743 689999999876 49999999999999
Q ss_pred EEccccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeee
Q 019849 267 KSTGIKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNF 332 (335)
Q Consensus 267 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f 332 (335)
+.+.. +..+||||||++++||+++|++|.++|.+..... . ..-.+..|+. .|.+.|+|
T Consensus 207 ~~~~~-~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~~--~---~~~~~~~C~~--~p~i~f~f 264 (334)
T 1j71_A 207 TSVST-NADVVLDSGTTITYFSQSTADKFARIVGATWDSR--N---EIYRLPSCDL--SGDAVFNF 264 (334)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEETT--T---TEEECSSSCC--CSEEEEEE
T ss_pred EeccC-CccEEEeCCCCcEecCHHHHHHHHHHcCCcccCC--C---ceEEEEcCCC--CCceEEEE
Confidence 98764 4789999999999999999999999998665311 0 0111246875 78888888
No 18
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.6e-42 Score=323.53 Aligned_cols=243 Identities=19% Similarity=0.233 Sum_probs=200.6
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEe-----cCCCCCCCCCCCCCCCCCCCCcccCCccccCC
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQ-----CNAPCTGCTLPPESLYHPKNNLVACNDPFCSA 122 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~-----~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~ 122 (335)
++.+||.. .+++|+++|.||||||++.|+|||||+++||+ |. +|..|. .++.|+|++|+ +++
T Consensus 2 ~i~~~l~~---~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~-~~~~C~--~~~~y~~~~Ss------T~~- 68 (339)
T 3fv3_A 2 SISLSLIN---EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCG-KGVDCK--SSGTFTPSSSS------SYK- 68 (339)
T ss_dssp CEEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEEC-TTCCTT--TTCCBCGGGCT------TCE-
T ss_pred ceeeEEEc---CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCC-CCCCCC--CCCcCCCccCc------cee-
Confidence 46788874 35789999999999999999999999999998 55 556776 47899998874 111
Q ss_pred CCCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC-
Q 019849 123 FHLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA- 201 (335)
Q Consensus 123 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~- 201 (335)
..+|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++.... .+||||||++..
T Consensus 69 -----------~~~~~~~i~Yg~gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~ 126 (339)
T 3fv3_A 69 -----------NLGAAFTIRYGDGSTSQGTWGKDTVTI----NGVSITGQQIADVTQTSV-------DQGILGIGYTSNE 126 (339)
T ss_dssp -----------EEEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEESS-------SSCEEECSCGGGC
T ss_pred -----------eCCceEEEEECCCceEEEEEEEEEEEE----CCEEECceEEEEEEecCC-------CceeEEecCcccc
Confidence 146899999999999999999999999 677889999999988653 699999998754
Q ss_pred ---------------chhhhhhhcCCc-ceeeeeeeccC--CCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeE
Q 019849 202 ---------------SILSQLQSLGLT-RNVLGHCLSVR--GGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAE 261 (335)
Q Consensus 202 ---------------s~~~ql~~~g~i-~~~Fs~~L~~~--~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~ 261 (335)
+++.+|+++|+| +++||+||.+. ..|.|+|||+|. ..|++.|+|+... .+|.|.+++
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~ 203 (339)
T 3fv3_A 127 AVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS---QALTISLAS 203 (339)
T ss_dssp CCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS---SSCEEEEEE
T ss_pred ccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC---ccEEEEEEE
Confidence 388999999999 89999999853 589999999864 4799999999876 489999999
Q ss_pred EEeCcEEccccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeee
Q 019849 262 LLFGGKSTGIKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNF 332 (335)
Q Consensus 262 i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f 332 (335)
|.++++.+... ..++|||||++++||+++|++|.++|.+..... ... ...-.-.|+....|.+.|+|
T Consensus 204 i~v~g~~~~~~-~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~--~~~-~~~~~~~C~~~~~p~i~f~f 270 (339)
T 3fv3_A 204 VNLKGSSFSFG-DGALLDSGTTLTYFPSDFAAQLADKAGARLVQV--ARD-QYLYFIDCNTDTSGTTVFNF 270 (339)
T ss_dssp EEESSCEEEEE-EEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE--ETT-EEEEEECTTCCCCSEEEEEE
T ss_pred EEECCEeecCC-ccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc--ccc-CceEEEecCCCCCCcEEEEE
Confidence 99999987654 789999999999999999999999998554311 001 11112369986779999998
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.1e-42 Score=323.64 Aligned_cols=244 Identities=17% Similarity=0.306 Sum_probs=195.0
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCC-CCCCCC-------CCCCCCCCCCCCcccCCccc
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNA-PCTGCT-------LPPESLYHPKNNLVACNDPF 119 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~-~c~~C~-------~~~~~~y~p~~S~v~c~~~~ 119 (335)
.+.+|+.. .+.+|+++|.||||+|++.|+|||||+++||+|.. +|..|. ...++.|+|++|+ +
T Consensus 2 ~v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------T 72 (342)
T 2qzx_A 2 PVAVTLHN---EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSR------T 72 (342)
T ss_dssp CEEEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCT------T
T ss_pred ceeEEEec---CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCC------C
Confidence 45778874 46799999999999999999999999999998541 355331 1246678877663 1
Q ss_pred cCCCCCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCC
Q 019849 120 CSAFHLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLG 199 (335)
Q Consensus 120 C~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~ 199 (335)
++ ..+|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++... ..+||||||+.
T Consensus 73 ~~------------~~~~~~~i~Yg~Gs~~~G~~~~D~v~~----g~~~v~~~~fg~~~~~~-------~~~GilGLg~~ 129 (342)
T 2qzx_A 73 SQ------------NLNTRFDIKYGDGSYAKGKLYKDTVGI----GGVSVRDQLFANVWSTS-------ARKGILGIGFQ 129 (342)
T ss_dssp CE------------EEEEEEEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEEC-------SSSCEEECSCG
T ss_pred cc------------cCCCcEEEEeCCCCeEEEEEEEEEEEE----CCEEecceEEEEEEecC-------CCcCEEEEccc
Confidence 11 146899999999988899999999999 56788999999998763 38999999997
Q ss_pred CC--------chhhhhhhcCCc-ceeeeeeecc--CCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCc
Q 019849 200 KA--------SILSQLQSLGLT-RNVLGHCLSV--RGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGG 266 (335)
Q Consensus 200 ~~--------s~~~ql~~~g~i-~~~Fs~~L~~--~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g 266 (335)
.. +++.+|+++|+| +++||+||.+ ...|.|+|||+|. ..|++.|+|+... .+|.|.+++|++++
T Consensus 130 ~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g 206 (342)
T 2qzx_A 130 SGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE---KKLTVGLRSVNVRG 206 (342)
T ss_dssp GGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS---SSCEEEEEEEEETT
T ss_pred cccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC---ceEEEEEeEEEECC
Confidence 53 789999999999 8999999985 4689999999864 4799999999876 48999999999999
Q ss_pred EEccccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeee
Q 019849 267 KSTGIKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNF 332 (335)
Q Consensus 267 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f 332 (335)
+.+.. +..+||||||++++||+++|++|+++|.+..... +.....-.-.|+. .|.+.|+|
T Consensus 207 ~~~~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~---~~~~~~~~~~C~~--~p~i~f~f 266 (342)
T 2qzx_A 207 RNVDA-NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFD---SAGNKVYVADCKT--SGTIDFQF 266 (342)
T ss_dssp EEEEE-EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEEC---TTSCEEEEECTTC--CCEEEEEE
T ss_pred EecCC-CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeec---cCCCcEEEEECCC--CCcEEEEE
Confidence 98764 4789999999999999999999999998665310 1101001125875 78888888
No 20
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=6.5e-42 Score=320.13 Aligned_cols=239 Identities=16% Similarity=0.221 Sum_probs=194.4
Q ss_pred CCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCC
Q 019849 58 YPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQC 137 (335)
Q Consensus 58 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~ 137 (335)
..+.+|+++|+|| +|++.|+|||||+++||+|. +|..|..+.++.|+|++|+ + + ..+|
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~-----~------------~~~~ 68 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSD-ELPSSEQTGHDLYTPSSSA--T-----K------------LSGY 68 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECT-TSCHHHHTTSCCCBCCSSC--E-----E------------CTTC
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeC-CCCccccCCCCCCCchhcC--C-----c------------cCCC
Confidence 4678999999999 89999999999999999999 9987766678899998874 1 0 1468
Q ss_pred eeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC---------chhhhhh
Q 019849 138 DYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA---------SILSQLQ 208 (335)
Q Consensus 138 ~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~---------s~~~ql~ 208 (335)
.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++...+.+......+||||||++.. +++++|+
T Consensus 69 ~~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~ 144 (325)
T 1ibq_A 69 SWDISYGDGSSASGDVYRDTVTV----GGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVK 144 (325)
T ss_dssp BEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHG
T ss_pred EEEEEeCCCCEEEEEEEEeEEEE----CCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHH
Confidence 99999999977999999999999 5778899999999986543322246899999998754 3678998
Q ss_pred hcCCcceeeeeeeccCCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEecccccee
Q 019849 209 SLGLTRNVLGHCLSVRGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTY 286 (335)
Q Consensus 209 ~~g~i~~~Fs~~L~~~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~ 286 (335)
++ +.+++||+||.+...|.|+|||+|. ..|++.|+|+.... .+|.|.+++|+++++.+...+..+||||||++++
T Consensus 145 ~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~ 221 (325)
T 1ibq_A 145 SQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQ--GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLIL 221 (325)
T ss_dssp GG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTT--SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEE
T ss_pred Hh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCC--ceEEEEECcEEECCeeccCCCceEEEeCCCCcEe
Confidence 87 3389999999977789999999874 47999999998544 6999999999999987765568999999999999
Q ss_pred eCHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-CcccccCccceeeee
Q 019849 287 FNSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKGTWKCLLGNF 332 (335)
Q Consensus 287 lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~f 332 (335)
+|+++|++|+++|...... . ....+ -.|+. ..|.+.|+|
T Consensus 222 lP~~~~~~i~~~i~~a~~~----~--~~g~~~~~C~~-~~P~i~f~f 261 (325)
T 1ibq_A 222 LDDEIVSAYYEQVSGAQES----Y--EAGGYVFSCST-DLPDFTVVI 261 (325)
T ss_dssp ECHHHHHHHHTTSTTCBCC----S--SSSSCEEETTC-CCCCEEEEE
T ss_pred CCHHHHHHHHHhCCCceEc----C--cCCeEEEEcCC-CCCcEEEEE
Confidence 9999999998887422211 0 11111 25984 568999988
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=6.7e-42 Score=321.98 Aligned_cols=245 Identities=18% Similarity=0.260 Sum_probs=197.6
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCC--CCCCCC-------CCCCCCCCCCCcccCCcc
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAP--CTGCTL-------PPESLYHPKNNLVACNDP 118 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~--c~~C~~-------~~~~~y~p~~S~v~c~~~ 118 (335)
.+.+|+.. .+++|+++|.||||||++.|+|||||+++||++. . |..|.. ..++.|+|++|+
T Consensus 2 ~v~~~l~~---~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~~~C~~~~~~~~~~~C~~~~~y~~~~Ss------ 71 (342)
T 3pvk_A 2 AVPVTLHN---EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDV-NVDCQVTYSDQTADFCKQKGTYDPSGSS------ 71 (342)
T ss_dssp CEEEEEEE---CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEE-EEEECCCSTTCCTTGGGTTCCBCGGGCT------
T ss_pred CcceEEec---CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcC-CCCCcccccccccCCCCCCCcCCCccCc------
Confidence 45677774 4679999999999999999999999999999875 4 643321 146778887763
Q ss_pred ccCCCCCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCC
Q 019849 119 FCSAFHLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGL 198 (335)
Q Consensus 119 ~C~~~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~ 198 (335)
+++ ..+|.|.+.|++|+.+.|.+++|+|+| ++..++++.|||++... ..+||||||+
T Consensus 72 T~~------------~~~~~~~i~Yg~gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~-------~~~GilGLg~ 128 (342)
T 3pvk_A 72 ASQ------------DLNTPFKIGYGDGSSSQGTLYKDTVGF----GGVSIKNQVLADVDSTS-------IDQGILGVGY 128 (342)
T ss_dssp TCE------------EEEEEEEEECSSSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEES-------SSSCEEECSC
T ss_pred cee------------ecCCeEEEEecCCCeEEEEEEEEEEEE----CCEEecceEEEEEEccC-------CCccEEEecC
Confidence 111 146899999999988999999999999 67788999999998764 3799999999
Q ss_pred CC-------CchhhhhhhcCCc-ceeeeeeecc--CCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCc
Q 019849 199 GK-------ASILSQLQSLGLT-RNVLGHCLSV--RGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGG 266 (335)
Q Consensus 199 ~~-------~s~~~ql~~~g~i-~~~Fs~~L~~--~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g 266 (335)
+. .+++.+|+++|+| +++||+||.+ ...|.|+|||+|. ..|++.|+|+.... +|.|.+++|.+++
T Consensus 129 ~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~---~~~v~l~~i~v~g 205 (342)
T 3pvk_A 129 KTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDR---ELRISLGSVEVSG 205 (342)
T ss_dssp GGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSS---SCEEEEEEEEETT
T ss_pred ccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccc---eEEEEEeEEEECC
Confidence 86 5799999999999 8999999985 3579999999864 47999999998764 8999999999999
Q ss_pred EEccccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeeee
Q 019849 267 KSTGIKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNFE 333 (335)
Q Consensus 267 ~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f~ 333 (335)
+.+...+..++|||||++++||+++|++|.++|.+....... . ...-...|+. .|.+.|+|.
T Consensus 206 ~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~--~-~~~~~~~C~~--~p~i~f~f~ 267 (342)
T 3pvk_A 206 KTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSN--G-NSFYEVDCNL--SGDVVFNFS 267 (342)
T ss_dssp EEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTT--S-CEEEEECSCC--CSEEEEEES
T ss_pred EEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCC--C-ceEEEEecCC--CCceEEEEC
Confidence 998766689999999999999999999999999765532100 0 0001235885 388888884
No 22
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=5.2e-42 Score=322.61 Aligned_cols=246 Identities=18% Similarity=0.311 Sum_probs=200.3
Q ss_pred CceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCcccCCccccCC
Q 019849 47 STAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT----GCTLPPESLYHPKNNLVACNDPFCSA 122 (335)
Q Consensus 47 s~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~----~C~~~~~~~y~p~~S~v~c~~~~C~~ 122 (335)
....+||++ +.+.+|+++|.||||||+++|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 6 ~~~~~~l~n--~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~-~C~~~~~~C~--~~~~y~~~~Ss------T~~- 73 (341)
T 3k1w_A 6 TTSSVILTN--YMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS-KCSRLYTACV--YHKLFDASDSS------SYK- 73 (341)
T ss_dssp BCEEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TSCTTCHHHH--TSCCBCGGGCT------TCE-
T ss_pred CCccccceE--ccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccC-CCCCCCCccc--CCCCCCCCcCc------Cee-
Confidence 355788874 56889999999999999999999999999999999 897 464 57889998874 111
Q ss_pred CCCCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC-
Q 019849 123 FHLPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA- 201 (335)
Q Consensus 123 ~~~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~- 201 (335)
..+|.|.+.|++| ++.|.+++|+|+| ++..+ ++.|||++............+||||||++..
T Consensus 74 -----------~~~~~~~i~Yg~g-s~~G~~~~D~v~i----g~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 136 (341)
T 3k1w_A 74 -----------HNGTELTLRYSTG-TVSGFLSQDIITV----GGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQA 136 (341)
T ss_dssp -----------EEEEEEEEEETTE-EEEEEEEEEEEEE----TTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGC
T ss_pred -----------ECCCEEEEEECCc-EEEEEEEEEEEEE----CCcee-eEEEEEEEEccccccccCCcceEEECCchhhc
Confidence 1468999999999 5999999999999 56778 9999999887643112356899999999864
Q ss_pred -----chhhhhhhcCCc-ceeeeeeeccCC------CceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcE
Q 019849 202 -----SILSQLQSLGLT-RNVLGHCLSVRG------GGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGK 267 (335)
Q Consensus 202 -----s~~~ql~~~g~i-~~~Fs~~L~~~~------~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~ 267 (335)
+++.+|+++|+| +++||+||.+.. .|.|+|||+|.. .|++.|+|+... .+|.|.+++|+++++
T Consensus 137 ~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~ 213 (341)
T 3k1w_A 137 IGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT---GVWQIQMKGVSVGSS 213 (341)
T ss_dssp GGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST---TSCEEEECCEEETTE
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC---CEEEEEEeEEEECCE
Confidence 478999999999 899999998543 899999998753 689999999865 599999999999998
Q ss_pred Ecc-ccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCccccc-Cccceeeee
Q 019849 268 STG-IKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKG-TWKCLLGNF 332 (335)
Q Consensus 268 ~~~-~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~-~~~~~~~~f 332 (335)
.+. ..+..++|||||+++++|++++++|.++|.+..... .-.-.|... ..|.+.|+|
T Consensus 214 ~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~--------g~~~~C~~~~~~p~i~f~f 272 (341)
T 3k1w_A 214 TLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLF--------DYVVKCNEGPTLPDISFHL 272 (341)
T ss_dssp EEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSS--------CEEEEGGGGGGCCCEEEEE
T ss_pred EeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecCC--------CeEEeCCCCCcCCcEEEEE
Confidence 643 345799999999999999999999999886543211 111248875 458999988
No 23
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=4.6e-42 Score=327.04 Aligned_cols=241 Identities=20% Similarity=0.262 Sum_probs=197.2
Q ss_pred eeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCCC
Q 019849 49 AVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHLP 126 (335)
Q Consensus 49 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~ 126 (335)
..+||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++
T Consensus 52 ~~~pl~~--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~--~~~~y~~~~Ss------T~~----- 115 (375)
T 1miq_A 52 DVIELDD--VANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK-KCNSSGCS--IKNLYDSSKSK------SYE----- 115 (375)
T ss_dssp BCCCGGG--TBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT-TCCSSGGG--GSCCBCGGGCT------TCE-----
T ss_pred ceEEccc--CCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC-CCCccccc--CCCcCCCccCC------ceE-----
Confidence 4578863 56789999999999999999999999999999999 896 565 57899998774 121
Q ss_pred CCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeee----cCCCCCCCCCcceEEeeCCCCC-
Q 019849 127 ENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYN----QRNPGPKPPPTAGVLGLGLGKA- 201 (335)
Q Consensus 127 ~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~~GIlGLg~~~~- 201 (335)
..+|.|.+.|++| ++.|.+++|+|+| |+..+++ .|||++. .. .+. ....+||||||++..
T Consensus 116 -------~~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~-~Fg~~~~~~~~~~-~f~-~~~~dGilGLg~~~~s 180 (375)
T 1miq_A 116 -------KDGTKVDITYGSG-TVKGFFSKDLVTL----GHLSMPY-KFIEVTDTDDLEP-IYS-SVEFDGILGLGWKDLS 180 (375)
T ss_dssp -------EEEEEEEEEETTE-EEEEEEEEEEEEE----TTEEEEE-EEEEEEECGGGTT-HHH-HSCCCEEEECSSCCTT
T ss_pred -------ECCcEEEEEeCCC-eEEEEEEEEEEEE----cCceECc-EEEEEEecccccc-ccc-cCCCceEEeCCCCccc
Confidence 1468999999999 5899999999999 5677888 9999988 43 221 245899999999864
Q ss_pred -----chhhhhhhcCCc-ceeeeeeeccC--CCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccc
Q 019849 202 -----SILSQLQSLGLT-RNVLGHCLSVR--GGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGI 271 (335)
Q Consensus 202 -----s~~~ql~~~g~i-~~~Fs~~L~~~--~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~ 271 (335)
+++++|+++|+| +++||+||.+. ..|.|+|||+|.. .|++.|+|+... .+|.|.++ |+++++.+
T Consensus 181 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~-i~v~g~~~-- 254 (375)
T 1miq_A 181 IGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD---LYWQIDLD-VHFGKQTM-- 254 (375)
T ss_dssp CSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS---SSSEEEEE-EEETTEEE--
T ss_pred ccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC---ceEEEEEE-EEECCEEc--
Confidence 578899999999 89999999864 4899999998753 689999999764 59999999 99999887
Q ss_pred cCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeee
Q 019849 272 KGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNF 332 (335)
Q Consensus 272 ~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f 332 (335)
.+..+||||||+++++|+++|++|.++|.+.... . ...-...|+....|.+.|+|
T Consensus 255 ~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----~-~g~~~~~C~~~~~P~i~f~f 309 (375)
T 1miq_A 255 EKANVIVDSGTTTITAPSEFLNKFFANLNVIKVP-----F-LPFYVTTCDNKEMPTLEFKS 309 (375)
T ss_dssp EEEEEEECTTBSSEEECHHHHHHHHHHHTCEECT-----T-SSCEEEETTCTTCCCEEEEC
T ss_pred ccceEEecCCCccEEcCHHHHHHHHHHhCCcccC-----C-CCeEEEECCCCCCCcEEEEE
Confidence 5689999999999999999999999998754321 1 01112469985568899988
No 24
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.2e-41 Score=330.22 Aligned_cols=242 Identities=18% Similarity=0.254 Sum_probs=195.3
Q ss_pred eeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCCCC
Q 019849 50 VFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHLPE 127 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~ 127 (335)
.+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++
T Consensus 129 ~~~L~n--~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~-~C~~~~C~--~~~~ydps~Ss------T~~------ 191 (453)
T 2bju_A 129 NIELVD--FQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV-KCTTAGCL--TKHLYDSSKSR------TYE------ 191 (453)
T ss_dssp EEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCSTTGG--GSCCBCGGGCT------TCE------
T ss_pred ceeeEe--cCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc-CCCccccC--CCCcCCCccCC------cee------
Confidence 467763 46789999999999999999999999999999999 897 564 57899998874 111
Q ss_pred CCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecC--CCCCCCCCcceEEeeCCCC-----
Q 019849 128 NIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQR--NPGPKPPPTAGVLGLGLGK----- 200 (335)
Q Consensus 128 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~--~~~~~~~~~~GIlGLg~~~----- 200 (335)
..+|.|.+.|++| ++.|.+++|+|+| |+..++ +.|||++... +........+||||||++.
T Consensus 192 ------~~~~~~~i~YgdG-s~~G~~~~Dtv~i----g~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~ 259 (453)
T 2bju_A 192 ------KDGTKVEMNYVSG-TVSGFFSKDLVTV----GNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGS 259 (453)
T ss_dssp ------EEEEEEEEECSSS-EEEEEEEEEEEEE----TTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTC
T ss_pred ------ECCcEEEEEcCCC-CeEEEEEEEEEEE----eCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccC
Confidence 1468999999999 4899999999999 567788 9999999875 4211124589999999875
Q ss_pred -CchhhhhhhcCCc-ceeeeeeeccC--CCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCc
Q 019849 201 -ASILSQLQSLGLT-RNVLGHCLSVR--GGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGL 274 (335)
Q Consensus 201 -~s~~~ql~~~g~i-~~~Fs~~L~~~--~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~ 274 (335)
.+++++|+++|+| +++||+||.+. ..|.|+|||+|.. .|++.|+|+... .+|.|.++ |+++++.+ .+.
T Consensus 260 ~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~---~~w~V~l~-I~Vgg~~~--~~~ 333 (453)
T 2bju_A 260 VDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD---LYWQITLD-AHVGNIML--EKA 333 (453)
T ss_dssp CCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE---TTEEEEEE-EEETTEEE--EEE
T ss_pred CCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC---ceEEEEEE-EEECcEEe--ccc
Confidence 3577899999999 89999999964 6899999998753 689999999865 59999999 99999442 568
Q ss_pred cEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeee
Q 019849 275 QIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNF 332 (335)
Q Consensus 275 ~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f 332 (335)
.+||||||+++++|+++|++|.+++.+..... ...-...|+....|.+.|+|
T Consensus 334 ~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~~~------g~~~~v~C~~~~~P~itf~f 385 (453)
T 2bju_A 334 NCIVDSGTSAITVPTDFLNKMLQNLDVIKVPF------LPFYVTLCNNSKLPTFEFTS 385 (453)
T ss_dssp EEEECTTCCSEEECHHHHHHHTTTSSCEECTT------SSCEEEETTCTTCCCEEEEC
T ss_pred cEEEcCCCCeEecCHHHHHHHHHHhCCcccCC------CceEEEecCCCCCCcEEEEE
Confidence 99999999999999999999988775431100 10112469885568899988
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=316.85 Aligned_cols=250 Identities=19% Similarity=0.238 Sum_probs=191.4
Q ss_pred eeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCC
Q 019849 52 PITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRC 131 (335)
Q Consensus 52 pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c 131 (335)
+|++ .....|+++|+||||||++.|+|||||+++||+|. +|..| ++.|+|++|+ +++
T Consensus 6 ~l~~--~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c~~~----~~~f~~~~Ss------T~~---------- 62 (383)
T 2ewy_A 6 NLQG--DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGT-PHSYI----DTYFDTERSS------TYR---------- 62 (383)
T ss_dssp CEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CBTTB----SCCCCGGGCT------TCE----------
T ss_pred eccC--CCCCcEEEEEEecCCCceEEEEEecCCCceEEecC-CCCcc----ccCcccccCc------cce----------
Confidence 4544 24567999999999999999999999999999998 88765 5789998874 111
Q ss_pred CCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC--------ch
Q 019849 132 EANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA--------SI 203 (335)
Q Consensus 132 ~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~--------s~ 203 (335)
..+|.|.+.|++| ++.|.+++|+|+|+. +......+.|+++.+..+.+......+||||||++.. ++
T Consensus 63 --~~~~~~~i~Yg~G-s~~G~~~~Dtv~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~ 137 (383)
T 2ewy_A 63 --SKGFDVTVKYTQG-SWTGFVGEDLVTIPK--GFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETF 137 (383)
T ss_dssp --EEEEEEEEECSSC-EEEEEEEEEEEEETT--TEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCH
T ss_pred --eCCceEEEEECCc-EEEEEEEEEEEEECC--CccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCH
Confidence 1468999999999 579999999999952 1111124678887765554432356899999998754 46
Q ss_pred hhhhhhcCCcceeeeeeec---------cCCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEcccc
Q 019849 204 LSQLQSLGLTRNVLGHCLS---------VRGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIK 272 (335)
Q Consensus 204 ~~ql~~~g~i~~~Fs~~L~---------~~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~ 272 (335)
+++|.+|+.|+++||+||. ....|.|+|||++. ..|++.|+|+... .+|.|.+++|+|+++.+...
T Consensus 138 ~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~g~~~~~~ 214 (383)
T 2ewy_A 138 FDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE---WYYQIEILKLEIGGQSLNLD 214 (383)
T ss_dssp HHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB---TTBBCCEEEEEETTEECCCC
T ss_pred HHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC---ceEEEEEEEEEECCEEcccc
Confidence 7799999888889999985 23589999999874 4799999999875 59999999999999987542
Q ss_pred -----CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC------ccceeeee
Q 019849 273 -----GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT------WKCLLGNF 332 (335)
Q Consensus 273 -----~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~------~~~~~~~f 332 (335)
...+||||||++++||+++|++|+++|.+.......+..........|++.. .|.+.|+|
T Consensus 215 ~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 285 (383)
T 2ewy_A 215 CREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYL 285 (383)
T ss_dssp TTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEE
T ss_pred ccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEE
Confidence 3689999999999999999999999999876521111000001234799753 58899888
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.5e-41 Score=315.95 Aligned_cols=238 Identities=14% Similarity=0.211 Sum_probs=190.9
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCCe
Q 019849 59 PLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQCD 138 (335)
Q Consensus 59 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~~ 138 (335)
.+.+|+++|.|| ||+++|+|||||+++||+|. +|..|..+.++.|+|++|+ +. ..+|.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~~-----------------~~~~~ 70 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSS-QTPSSERSGHDYYTPGSSA--QK-----------------IDGAT 70 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTCCCBCCCTTC--EE-----------------EEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecC-CCCcccccCCCCCCccccC--Cc-----------------cCCCe
Confidence 567899999999 79999999999999999999 8987766678899998874 11 13689
Q ss_pred eEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC---------chhhhhhh
Q 019849 139 YEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA---------SILSQLQS 209 (335)
Q Consensus 139 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~---------s~~~ql~~ 209 (335)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++...+.+......+||||||++.. +++++|++
T Consensus 71 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~ 146 (323)
T 1izd_A 71 WSISYGDGSSASGDVYKDKVTV----GGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKS 146 (323)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred EEEEcCCCCeEEEEEEEEEEEE----CCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHH
Confidence 9999999977999999999999 5778899999999986543221245899999998754 46788887
Q ss_pred cCCcceeeeeeeccCCCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceee
Q 019849 210 LGLTRNVLGHCLSVRGGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYF 287 (335)
Q Consensus 210 ~g~i~~~Fs~~L~~~~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~l 287 (335)
+ +-+++||+||.+...|.|+||++|.. .|++.|+|+.... .+|.|.+++|++++ .+...+..+||||||+++++
T Consensus 147 ~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~~l 222 (323)
T 1izd_A 147 S-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQ--GFWGFTADGYSIGS-DSSSDSITGIADTGTTLLLL 222 (323)
T ss_dssp G-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTT--SSCEEEESEEEETT-EEECCCEEEEECTTCCSEEE
T ss_pred h-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCC--ceEEEEECeEEECC-cccCCCceEEEeCCCcceeC
Confidence 7 33899999999777999999998754 6899999998544 69999999999999 66545689999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccCccceeeee
Q 019849 288 NSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGTWKCLLGNF 332 (335)
Q Consensus 288 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~f 332 (335)
|+++|++|.++|...... .....-.. .|+. ..|.+.|+|
T Consensus 223 p~~~~~~i~~~i~ga~~~----~~~g~~~~-~C~~-~~P~i~f~f 261 (323)
T 1izd_A 223 DDSIVDAYYEQVNGASYD----SSQGGYVF-PSSA-SLPDFSVTI 261 (323)
T ss_dssp CHHHHHHHHTTSTTCEEE----TTTTEEEE-ETTC-CCCCEEEEE
T ss_pred CHHHHHHHHHhCCCcEEc----CcCCEEEE-ECCC-CCceEEEEE
Confidence 999999998887422110 00001112 4883 568899988
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.4e-40 Score=316.30 Aligned_cols=253 Identities=17% Similarity=0.188 Sum_probs=195.2
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCC
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPE 127 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~ 127 (335)
.+..+|.+. ....|+++|.||||+|++.|+|||||+++||+|. +|..| ++.|+|++|+ +++
T Consensus 10 ~~~~~l~~~--~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~c~~~----~~~y~~~~Ss------T~~------ 70 (395)
T 2qp8_A 10 EMVDNLRGK--SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PHPFL----HRYYQRQLSS------TYR------ 70 (395)
T ss_dssp TTTTCEEEE--TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CCTTC----SCCCCGGGCT------TCE------
T ss_pred eeeeecCCC--CCceEEEEEEecCCCceEEEEEecCCCceEEECC-CCccc----cCCcCcccCC------Cce------
Confidence 334456542 4568999999999999999999999999999998 78654 5789998874 111
Q ss_pred CCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCC-ceEEEeeeecCCCCCCCCCcceEEeeCCCCC-----
Q 019849 128 NIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGP-RLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA----- 201 (335)
Q Consensus 128 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~----- 201 (335)
..+|.|.+.|++| ++.|.+++|+|+|+. +..+. .+.|+++.+....+......+||||||++..
T Consensus 71 ------~~~~~~~i~Yg~G-s~~G~~~~Dtv~ig~---g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~ 140 (395)
T 2qp8_A 71 ------DLRKGVYVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDD 140 (395)
T ss_dssp ------EEEEEEEEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCT
T ss_pred ------eCCceEEEEECCc-EEEEEEEeEEEEECC---CCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCC
Confidence 1468999999999 569999999999942 23332 3678887765444432356899999998753
Q ss_pred ---chhhhhhhcCCcceeeeeeecc------------CCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEe
Q 019849 202 ---SILSQLQSLGLTRNVLGHCLSV------------RGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLF 264 (335)
Q Consensus 202 ---s~~~ql~~~g~i~~~Fs~~L~~------------~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v 264 (335)
+++.+|++|+.|+++||+||.+ ...|.|+||++|. ..|++.|+|+... .+|.|.+++|+|
T Consensus 141 ~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v 217 (395)
T 2qp8_A 141 SLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEI 217 (395)
T ss_dssp TSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---TTBBCCEEEEEE
T ss_pred CCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC---ceEEEEEEEEEE
Confidence 5778999999888899999963 3689999999874 3689999999875 599999999999
Q ss_pred CcEEcccc-----CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC------ccceeeee
Q 019849 265 GGKSTGIK-----GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT------WKCLLGNF 332 (335)
Q Consensus 265 ~g~~~~~~-----~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~------~~~~~~~f 332 (335)
+++.+... ...+||||||++++||+++|++|+++|.+......+....-......|++.. .|.+.|+|
T Consensus 218 ~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 296 (395)
T 2qp8_A 218 NGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYL 296 (395)
T ss_dssp TTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEE
T ss_pred CCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEEEEE
Confidence 99987532 3689999999999999999999999999886532111100001134799864 58899888
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9e-40 Score=314.08 Aligned_cols=245 Identities=17% Similarity=0.181 Sum_probs=191.6
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCCe
Q 019849 59 PLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQCD 138 (335)
Q Consensus 59 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~~ 138 (335)
....|+++|+||||||+++|+|||||+++||+|. +| |. .++.|+|++|+ +++ ..+|.
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-~c--~~--~~~~y~~~~Ss------T~~------------~~~~~ 82 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYR------------DLRKG 82 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCE------------EEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccC-CC--Cc--ccCCcCcccCc------ccc------------cCCCE
Confidence 3458999999999999999999999999999998 77 43 47889998874 111 14689
Q ss_pred eEEEeCCCCeEEEEEEEEEEEeeccCCCcCCC-ceEEEeeeecCCCCCCCCCcceEEeeCCCC--------Cchhhhhhh
Q 019849 139 YEVLYADHGSSLGVLVTDHFPLRLTNGSLLGP-RLIFGCGYNQRNPGPKPPPTAGVLGLGLGK--------ASILSQLQS 209 (335)
Q Consensus 139 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~ql~~ 209 (335)
|.+.|++| ++.|.+++|+|+|+. +..+. .+.|+++......+......+||||||++. .+++++|++
T Consensus 83 ~~i~Yg~G-s~~G~~~~D~v~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 158 (402)
T 3vf3_A 83 VYVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 158 (402)
T ss_dssp EEEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEEECcE-EEEEEEEEEEEEECC---ccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHH
Confidence 99999999 579999999999952 22333 345788776655443345789999999874 467889999
Q ss_pred cCCcceeeeeeecc------------CCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEcccc---
Q 019849 210 LGLTRNVLGHCLSV------------RGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIK--- 272 (335)
Q Consensus 210 ~g~i~~~Fs~~L~~------------~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~--- 272 (335)
++.|.++||+||.. ...|.|+||+++. ..|++.|+|+... .+|.|.+++|+++++.+...
T Consensus 159 q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~~~~~ 235 (402)
T 3vf3_A 159 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKMDCKE 235 (402)
T ss_dssp HSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB---TTBEECEEEEEETTEECCCCGGG
T ss_pred ccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC---cEEEEEEeEEEECCEEecccccc
Confidence 99998899999962 3479999999875 3689999999875 59999999999999987642
Q ss_pred --CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC------ccceeeeee
Q 019849 273 --GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT------WKCLLGNFE 333 (335)
Q Consensus 273 --~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~------~~~~~~~f~ 333 (335)
...+||||||++++||+++|++|+++|.+......+...........|++.. .|.+.|+|.
T Consensus 236 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 304 (402)
T 3vf3_A 236 YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLM 304 (402)
T ss_dssp GGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEE
T ss_pred cCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEe
Confidence 4689999999999999999999999999986522122110011246899864 588999883
No 29
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=4.3e-41 Score=315.17 Aligned_cols=248 Identities=13% Similarity=0.095 Sum_probs=197.3
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCC
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHL 125 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~ 125 (335)
.+..||.+ +.+.+|+++|+|| ||++.|+|||||+++||+|. +|. .|....++.|+|++| .+.
T Consensus 6 ~~~~~l~n--~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~C~~~~~~~y~~~~S--T~~--------- 69 (330)
T 1yg9_A 6 PLYKLVHV--FINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ-ECVGGACVCPNLQKYEKLKP--KYI--------- 69 (330)
T ss_dssp CSCSCEEE--EECTTSEEEEEET--TEEEEEEEETTCCCEEEECT-TCCSGGGGSTTCCCCCCSSC--EEE---------
T ss_pred eeEeeeec--CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCCccCcccccCccCCCCC--ceE---------
Confidence 34567763 4567899999999 89999999999999999999 896 684446789999887 211
Q ss_pred CCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCCc---
Q 019849 126 PENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKAS--- 202 (335)
Q Consensus 126 ~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~s--- 202 (335)
..++.|.+.|++| ++.|.+++|+|+| ++..++++.|||++.....+. ....+||||||++..+
T Consensus 70 --------~~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~~~~~~fg~~~~~~~~f~-~~~~~GilGLg~~~~s~~~ 135 (330)
T 1yg9_A 70 --------SDGNVQVKFFDTG-SAVGRGIEDSLTI----SQLTTSQQDIVLADELSQEVC-ILSADVVVGIAAPGCPNAL 135 (330)
T ss_dssp --------EEEEEEEEETTTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEECTHHH-HTTCSEEEECSCTTSCCTT
T ss_pred --------ECCCEEEEEECCc-eEEEEEEEEEEEE----CCEEEcCeEEEEEEEcccccc-cccCceEEEcCcchhcccc
Confidence 1357899999999 5699999999999 577889999999998732221 2458999999998765
Q ss_pred ----hhhhhhhcCCcceeeeeeeccC--C--CceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEcccc
Q 019849 203 ----ILSQLQSLGLTRNVLGHCLSVR--G--GGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIK 272 (335)
Q Consensus 203 ----~~~ql~~~g~i~~~Fs~~L~~~--~--~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~ 272 (335)
++++|+++|+|+++||+||.+. . .|.|+|||+|.. .|++.|+|+... .+|.|.+++|+++++.+...
T Consensus 136 ~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~ 212 (330)
T 1yg9_A 136 KGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD---DSWKFRLDGVKIGDTTVAPA 212 (330)
T ss_dssp SCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT---TSCCEECSEEEETTEEEECT
T ss_pred CCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC---CEEEEEeCeEEECCEEEcCC
Confidence 8899999998899999999854 2 799999998753 689999999854 59999999999999886545
Q ss_pred CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC-ccceeeee
Q 019849 273 GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT-WKCLLGNF 332 (335)
Q Consensus 273 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~-~~~~~~~f 332 (335)
+..+||||||+++++|+++|++|.++|.+.....+ ...-..-.|+... .|.+.|+|
T Consensus 213 ~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~g----~~~~~~~~C~~~~~~p~i~f~f 269 (330)
T 1yg9_A 213 GTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEKTT----TRRICKLDCSKIPSLPDVTFVI 269 (330)
T ss_dssp TCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEECS----SCEEEEECGGGGGGSCCEEEEE
T ss_pred CcEEEEecCCccccCCHHHHHHHHHHhCCcccCCC----ceEEEEEECCCccccCcEEEEE
Confidence 68999999999999999999999999864322110 0000012498754 59999988
No 30
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.2e-41 Score=315.15 Aligned_cols=236 Identities=16% Similarity=0.211 Sum_probs=189.9
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCCe
Q 019849 59 PLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQCD 138 (335)
Q Consensus 59 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~~ 138 (335)
.+.+|+++|+|| ||++.|+|||||+++||+|. +|..|..+.++.|+|++|+ .. ..+|.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~-~C~~~~c~~~~~y~~~~Ss--~~-----------------~~~~~ 70 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFST-ELPASQQSGHSVYNPSATG--KE-----------------LSGYT 70 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBT-TSCHHHHTTSCCBCHHHHC--EE-----------------EEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC-CCCchhccCCCCCCcccCC--cc-----------------cCCCe
Confidence 567899999999 89999999999999999999 9987766678899998774 10 13689
Q ss_pred eEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC---------chhhhhhh
Q 019849 139 YEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA---------SILSQLQS 209 (335)
Q Consensus 139 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~---------s~~~ql~~ 209 (335)
|.+.|++|+.+.|.+++|+|+| ++..++++.|||++...+.+......+||||||++.. +++++|++
T Consensus 71 ~~i~Yg~Gs~~~G~~~~D~v~i----g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~ 146 (323)
T 1bxo_A 71 WSISYGDGSSASGNVFTDSVTV----GGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKS 146 (323)
T ss_dssp EEEECTTSCEEEEEEEEEEEEE----TTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGG
T ss_pred EEEEeCCCCeEEEEEEEEEEEE----CCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHH
Confidence 9999999977999999999999 5778899999999986543322246899999998743 46788887
Q ss_pred cCCcceeeeeeeccCCCceEEeCCCCC--CCCCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceee
Q 019849 210 LGLTRNVLGHCLSVRGGGYLFLGHDLV--PSSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYF 287 (335)
Q Consensus 210 ~g~i~~~Fs~~L~~~~~G~l~~G~~~~--~~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~l 287 (335)
+ +-+++||+||.+...|.|+||++|. ..|++.|+|+.... .+|.|.+++|++++ +...+..+||||||+++++
T Consensus 147 ~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~--~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs~~~l 221 (323)
T 1bxo_A 147 S-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQ--GFWSFNVDSYTAGS--QSGDGFSGIADTGTTLLLL 221 (323)
T ss_dssp G-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTT--SSCEEEEEEEEETT--EEEEEEEEEECTTCSSEEE
T ss_pred h-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCC--CeEEEEEeeEEECC--ccCCCceEEEeCCCCceeC
Confidence 7 3389999999977799999999874 47999999998544 69999999999999 3334578999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCCCcCCCCc-CcccccCccceeeee
Q 019849 288 NSQAYKTTLDLMRKDLKGKPLEDTAEEKAL-PVCWKGTWKCLLGNF 332 (335)
Q Consensus 288 p~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~f 332 (335)
|+++|++|+++|....... ....+ -.|+. ..|.+.|+|
T Consensus 222 P~~~~~~l~~~i~~a~~~~------~~g~~~~~C~~-~~P~i~f~f 260 (323)
T 1bxo_A 222 DDSVVSQYYSQVSGAQQDS------NAGGYVFDCST-NLPDFSVSI 260 (323)
T ss_dssp CHHHHHHHHTTSTTCEEET------TTTEEEECTTC-CCCCEEEEE
T ss_pred CHHHHHHHHHhCCCceEcC------cCCEEEEECCC-CCceEEEEE
Confidence 9999999988874221110 01111 24984 568999988
No 31
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1e-39 Score=318.43 Aligned_cols=245 Identities=17% Similarity=0.186 Sum_probs=194.3
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCCCCCCCCCCe
Q 019849 59 PLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENIRCEANDQCD 138 (335)
Q Consensus 59 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~~c~~~~~~~ 138 (335)
.+..|+++|+||||||+++|+|||||+++||+|. +| |. .++.|+|++|+ +++ ..+|.
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~-~c--c~--~~~~y~~~~Ss------T~~------------~~~~~ 128 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAA-PH--PF--LHRYYQRQLSS------TYR------------DLRKG 128 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECS-CC--TT--CSCCCCGGGCT------TCE------------EEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecc-cc--cc--cCCcccCCCCC------Ccc------------cCCcc
Confidence 3458999999999999999999999999999998 77 43 57899998874 111 14689
Q ss_pred eEEEeCCCCeEEEEEEEEEEEeeccCCCcCCC-ceEEEeeeecCCCCCCCCCcceEEeeCCCC--------Cchhhhhhh
Q 019849 139 YEVLYADHGSSLGVLVTDHFPLRLTNGSLLGP-RLIFGCGYNQRNPGPKPPPTAGVLGLGLGK--------ASILSQLQS 209 (335)
Q Consensus 139 ~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~-~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~--------~s~~~ql~~ 209 (335)
|.+.|++| ++.|.+++|+|+|++ +..+. ++.|+++......+......+||||||++. .+++++|++
T Consensus 129 ~~i~Yg~G-s~~G~~~~Dtv~ig~---~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~ 204 (455)
T 3lpj_A 129 VYVPYTQG-KWEGELGTDLVSIPH---GPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVK 204 (455)
T ss_dssp EEEECSSC-EEEEEEEEEEEECTT---SCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHH
T ss_pred EEEEeCCe-EEEEEEEEEEEEECC---CcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHH
Confidence 99999999 579999999999952 22222 467888887665543345789999999874 467889999
Q ss_pred cCCcceeeeeeecc------------CCCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEcccc---
Q 019849 210 LGLTRNVLGHCLSV------------RGGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIK--- 272 (335)
Q Consensus 210 ~g~i~~~Fs~~L~~------------~~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~--- 272 (335)
++.|.++||+||.+ ...|.|+||++|.. .|++.|+|+... .+|.|.+++|.|+++.+...
T Consensus 205 q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~w~v~l~~i~v~g~~~~~~~~~ 281 (455)
T 3lpj_A 205 QTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE---WYYEVIIVRVEINGQDLKMDCKE 281 (455)
T ss_dssp HSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB---TTBBCCEEEEEETTEECCCCGGG
T ss_pred ccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC---ceeEEEEeEEEECCEEccccccc
Confidence 99998899999962 45899999998753 689999999875 59999999999999987642
Q ss_pred --CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCcccccC------ccceeeeee
Q 019849 273 --GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKGT------WKCLLGNFE 333 (335)
Q Consensus 273 --~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~------~~~~~~~f~ 333 (335)
...+||||||++++||+++|++|+++|.+......+...........|++.. .|.+.|+|.
T Consensus 282 ~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~ 350 (455)
T 3lpj_A 282 YNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLM 350 (455)
T ss_dssp GGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEE
T ss_pred cCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEc
Confidence 4689999999999999999999999999987522121110011246899875 588999883
No 32
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2.6e-40 Score=323.69 Aligned_cols=223 Identities=22% Similarity=0.328 Sum_probs=186.1
Q ss_pred ceeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC---CCCCCCCCCCCCCCCcccCCccccCCCC
Q 019849 48 TAVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT---GCTLPPESLYHPKNNLVACNDPFCSAFH 124 (335)
Q Consensus 48 ~~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~---~C~~~~~~~y~p~~S~v~c~~~~C~~~~ 124 (335)
...+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 41 ~~~~~l~n--~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~-~C~~~~~C~--~~~~y~~~~Ss------T~~--- 106 (478)
T 1qdm_A 41 GDIVALKN--YMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA-KCYFSIACY--LHSRYKAGASS------TYK--- 106 (478)
T ss_dssp SCSGGGCC--GGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT-TCCSCGGGG--GSCCBCGGGCT------TCB---
T ss_pred CceEEeEe--ccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC-CCCCCcccc--CCCCCCcccCC------Cee---
Confidence 34577763 46789999999999999999999999999999998 895 576 46789998874 221
Q ss_pred CCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCCc--
Q 019849 125 LPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKAS-- 202 (335)
Q Consensus 125 ~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~s-- 202 (335)
..+|.|.+.|++| ++.|.+++|+|+| |+..++++.|||++...+.......++||||||++..+
T Consensus 107 ---------~~~~~~~i~Yg~G-s~~G~~~~Dtv~i----g~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~ 172 (478)
T 1qdm_A 107 ---------KNGKPAAIQYGTG-SIAGYFSEDSVTV----GDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVG 172 (478)
T ss_dssp ---------CCCCEEEEEETTE-EEEEEEEEEEEEE----TTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGG
T ss_pred ---------eCCcEEEEEcCCC-CeEEEEEEEEEEE----CCeEECCEEEEEEEecCCcccccccccceecccccccccC
Confidence 1468999999999 5999999999999 57788899999998765421112457999999998754
Q ss_pred ----hhhhhhhcCCc-ceeeeeeeccC----CCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEccc
Q 019849 203 ----ILSQLQSLGLT-RNVLGHCLSVR----GGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGI 271 (335)
Q Consensus 203 ----~~~ql~~~g~i-~~~Fs~~L~~~----~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~ 271 (335)
++.+|.++|+| +++||+||.+. ..|.|+|||+|.. .|++.|+|+... ++|.|.+++|.++++.+..
T Consensus 173 ~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~---~~w~v~l~~i~v~g~~~~~ 249 (478)
T 1qdm_A 173 KAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK---GYWQFDMGDVLVGGKSTGF 249 (478)
T ss_dssp GCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE---TTEEEEECCEEETTEECST
T ss_pred CCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC---CeEEEEEeEEEECCEEEee
Confidence 56789999999 89999999853 4899999998753 689999999865 5999999999999988653
Q ss_pred --cCccEEEeccccceeeCHHHHHHHHHHHHH
Q 019849 272 --KGLQIIFDSGSSYTYFNSQAYKTTLDLMRK 301 (335)
Q Consensus 272 --~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~ 301 (335)
.+..+||||||+++++|+++|++|.++|.+
T Consensus 250 ~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 250 CAGGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp TTTCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred cCCCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 357999999999999999999999998864
No 33
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.6e-40 Score=322.53 Aligned_cols=239 Identities=16% Similarity=0.204 Sum_probs=193.9
Q ss_pred eeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC--CCCCCCCCCCCCCCCcccCCccccCCCCCCC
Q 019849 50 VFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT--GCTLPPESLYHPKNNLVACNDPFCSAFHLPE 127 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~--~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~ 127 (335)
.+||.+ +.+.+|+++|+||||||++.|+|||||+++||+|. .|. .|. .++.|+|++|+ +++
T Consensus 128 ~~pL~n--~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~-~C~s~~C~--~~~~ydps~Ss------T~~------ 190 (451)
T 3qvc_A 128 NVELKD--LANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI-KCTSESCE--SKNHYDSSKSK------TYE------ 190 (451)
T ss_dssp CCCGGG--GBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT-TCCSGGGT--TSCCBCGGGCT------TCE------
T ss_pred ccceee--cCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC-CCCccccC--CCCCCCCCCCc------ccc------
Confidence 556653 46789999999999999999999999999999999 894 675 57899998874 111
Q ss_pred CCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeee----cCCCCCCCCCcceEEeeCCCC---
Q 019849 128 NIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYN----QRNPGPKPPPTAGVLGLGLGK--- 200 (335)
Q Consensus 128 ~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~----~~~~~~~~~~~~GIlGLg~~~--- 200 (335)
..+|.|.+.|++|+ +.|.+++|+|+| |+..++ +.|||++. ..+ +. ....+||||||++.
T Consensus 191 ------~~~~~f~i~YgdGs-~~G~~~~Dtv~i----gg~~v~-~~Fg~a~~t~~~~~~-f~-~~~~dGILGLg~~~~s~ 256 (451)
T 3qvc_A 191 ------KDDTPVKLTSKAGT-ISGIFSKDLVTI----GKLSVP-YKFIEMTEIVGFEPF-YS-ESDVDGVFGLGWKDLSI 256 (451)
T ss_dssp ------EEEEEEEEECSSEE-EEEEEEEEEEEE----TTEEEE-EEEEEEEEEEECTTH-HH-HSCCCEEEECSSBCSSS
T ss_pred ------cCCCEEEEEECCCE-EEEEEEEEEEEE----CCEEEE-EEEEEEEeccccCCC-cc-CCCCCEEEecCCCcccc
Confidence 14679999999995 999999999999 577788 99999988 443 21 24579999999875
Q ss_pred ---CchhhhhhhcCCc-ceeeeeeeccC--CCceEEeCCCCCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEcccc
Q 019849 201 ---ASILSQLQSLGLT-RNVLGHCLSVR--GGGYLFLGHDLVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIK 272 (335)
Q Consensus 201 ---~s~~~ql~~~g~i-~~~Fs~~L~~~--~~G~l~~G~~~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~ 272 (335)
.+++.+|+++|+| +++||+||.+. ..|.|+|||+|.. .|++.|+|+... .+|.|.++ |+++++ ...
T Consensus 257 ~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~---~~w~v~l~-I~Vgg~--~~~ 330 (451)
T 3qvc_A 257 GSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD---LMWQVDLD-VHFGNV--SSK 330 (451)
T ss_dssp SCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST---TSSEEEEE-EEETTE--EEE
T ss_pred cCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC---CeeEEEEE-EEECCc--cCC
Confidence 4688999999999 89999999954 4799999998753 689999999865 59999999 999998 334
Q ss_pred CccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCC-cCcccccCccceeeee
Q 019849 273 GLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKA-LPVCWKGTWKCLLGNF 332 (335)
Q Consensus 273 ~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~f 332 (335)
+..++|||||+++++|++++++|.++|.+.... .... .-.|.....|.+.|+|
T Consensus 331 ~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~-------~~g~y~v~C~~~~~P~itf~f 384 (451)
T 3qvc_A 331 KANVILDSATSVITVPTEFFNQFVESASVFKVP-------FLSLYVTTCGNTKLPTLEYRS 384 (451)
T ss_dssp EEEEEECTTBSSEEECHHHHHHHHTTTTCEECT-------TSSCEEEETTCTTCCCEEEEE
T ss_pred CceEEEeCCCccccCCHHHHHHHHHHcCCeecC-------CCCeEEeeCCcCcCCcEEEEE
Confidence 589999999999999999999999888643321 0111 1257734568899988
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=6.9e-39 Score=301.33 Aligned_cols=232 Identities=22% Similarity=0.281 Sum_probs=185.3
Q ss_pred eeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCCCCCCcccCCccccCCCCCCCCC
Q 019849 50 VFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCTGCTLPPESLYHPKNNLVACNDPFCSAFHLPENI 129 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~~C~~~~~~~y~p~~S~v~c~~~~C~~~~~~~~~ 129 (335)
.+||++ .+.+|+++|.||||+|++.|+|||||+++||+|. +.|+|++|+.
T Consensus 4 ~~~l~n---~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~---------------- 53 (340)
T 1wkr_A 4 SVPATN---QLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS---------------- 53 (340)
T ss_dssp EEEEEE---CSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE----------------
T ss_pred cEeeec---cCcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc----------------
Confidence 568874 2568999999999999999999999999999774 4688877631
Q ss_pred CCCCCCCCeeEEEeCCCCeEEEEEEEEEEEeeccCCCcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC--------
Q 019849 130 RCEANDQCDYEVLYADHGSSLGVLVTDHFPLRLTNGSLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA-------- 201 (335)
Q Consensus 130 ~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~~~~g~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~-------- 201 (335)
..+|.|.+.|++| +++|.+++|+|+| ++..++++.|||++...+ + ...+||||||++..
T Consensus 54 ----~~~~~~~i~Yg~G-s~~G~~~~Dtv~~----g~~~v~~~~fg~~~~~~~-~---~~~~GilGLg~~~~s~~~~~~~ 120 (340)
T 1wkr_A 54 ----ATSDKVSVTYGSG-SFSGTEYTDTVTL----GSLTIPKQSIGVASRDSG-F---DGVDGILGVGPVDLTVGTLSPH 120 (340)
T ss_dssp ----EEEEEEEEECSSC-EEEEEEEEEEEEE----TTEEEEEEEEEEEEEEES-C---TTCSEEEECSCGGGGTTSEESC
T ss_pred ----ccCceEEEEECCc-EEEEEEEEEEEEE----CCEEEcceEEEEEEccCC-C---cCCCcEEECCcccccccccccc
Confidence 1468999999999 5999999999999 567889999999998755 2 25899999998753
Q ss_pred ------chhhhhhhcCCc-ceeeeeeecc-----CCCceEEeCCCCC--CCCCcEEEeCccCCC-CCceEEeeeEEEeCc
Q 019849 202 ------SILSQLQSLGLT-RNVLGHCLSV-----RGGGYLFLGHDLV--PSSGIAWTPMSRDLL-EKHYSSGPAELLFGG 266 (335)
Q Consensus 202 ------s~~~ql~~~g~i-~~~Fs~~L~~-----~~~G~l~~G~~~~--~~g~l~~~p~~~~~~-~~~~~v~~~~i~v~g 266 (335)
+++.+|+++|+| +++||+||.+ ...|.|+||++|. ..|++.|+|+..... ..+|.|. .+|.+++
T Consensus 121 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~ 199 (340)
T 1wkr_A 121 TSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGS 199 (340)
T ss_dssp TTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETT
T ss_pred ccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECC
Confidence 467899999999 8999999984 2479999999874 479999999987522 3699999 9999998
Q ss_pred -EEccccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCCcCCCCcCccccc-Cccceeeee
Q 019849 267 -KSTGIKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDTAEEKALPVCWKG-TWKCLLGNF 332 (335)
Q Consensus 267 -~~~~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~-~~~~~~~~f 332 (335)
+.+.. +..+||||||++++||+++|++|.+++.+..... . .. -.-.|... ..|.+.|+|
T Consensus 200 ~~~l~~-~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~---~--g~-~~~~C~~~~~~p~i~f~f 260 (340)
T 1wkr_A 200 STSILS-STAGIVDTGTTLTLIASDAFAKYKKATGAVADNN---T--GL-LRLTTAQYANLQSLFFTI 260 (340)
T ss_dssp TEEEEE-EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTT---T--SS-EEECHHHHHTCCCEEEEE
T ss_pred CeEccC-CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCC---C--Ce-EEeeccccccCCcEEEEE
Confidence 87743 4789999999999999999999988886544311 0 00 01246643 347777776
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.89 E-value=1.9e-23 Score=186.68 Aligned_cols=157 Identities=17% Similarity=0.198 Sum_probs=124.8
Q ss_pred CcCCCceEEEeeeecCCCCCCCCCcceEEeeCCCCC------chhhhhhhcCCc-ceeeeeeeccCC----CceEEeCCC
Q 019849 166 SLLGPRLIFGCGYNQRNPGPKPPPTAGVLGLGLGKA------SILSQLQSLGLT-RNVLGHCLSVRG----GGYLFLGHD 234 (335)
Q Consensus 166 ~~~~~~~~Fg~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~ql~~~g~i-~~~Fs~~L~~~~----~G~l~~G~~ 234 (335)
+..++++.|||++...+........+||||||++.. +++++|+++|+| +++||+||.+.. .|.|+||++
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 456789999999987664333467899999999753 577899999999 899999998542 899999998
Q ss_pred CCC--CCCcEEEeCccCCCCCceEEeeeEEEeCcEEc-cccCccEEEeccccceeeCHHHHHHHHHHHHHHhcCCCCCCC
Q 019849 235 LVP--SSGIAWTPMSRDLLEKHYSSGPAELLFGGKST-GIKGLQIIFDSGSSYTYFNSQAYKTTLDLMRKDLKGKPLEDT 311 (335)
Q Consensus 235 ~~~--~g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~-~~~~~~~iiDSGTs~~~lp~~~~~~l~~~i~~~~~~~~~~~~ 311 (335)
|.. .|++.|+|+... .+|.|.+++|+++++.+ ...+..+||||||+++++|+++|++|.+++.+.....
T Consensus 82 d~~~~~g~l~~~p~~~~---~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~----- 153 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRK---AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQ----- 153 (241)
T ss_dssp CGGGEEEEEEEEECSSB---TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEET-----
T ss_pred CHHHcCCceEEEECccc---cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeeccC-----
Confidence 753 689999999865 59999999999999764 3345789999999999999999999999886433210
Q ss_pred cCCCCcCccccc-Cccceeeee
Q 019849 312 AEEKALPVCWKG-TWKCLLGNF 332 (335)
Q Consensus 312 ~~~~~~~~C~~~-~~~~~~~~f 332 (335)
. .-.-.|++. ..|.+.|+|
T Consensus 154 -g-~~~~~C~~~~~~p~i~f~f 173 (241)
T 1lya_B 154 -G-EYMIPCEKVSTLPAITLKL 173 (241)
T ss_dssp -T-EEEEEGGGGGGSCCEEEEE
T ss_pred -C-cEEEECCCCccCCeEEEEE
Confidence 0 011259875 458999988
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.85 E-value=1.9e-21 Score=149.09 Aligned_cols=89 Identities=21% Similarity=0.401 Sum_probs=74.9
Q ss_pred eeeeeeeCCCCCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecCCCCC----CCCCCCCCCCCCCCCcccCCccccCCCC
Q 019849 49 AVFPITGNVYPLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCNAPCT----GCTLPPESLYHPKNNLVACNDPFCSAFH 124 (335)
Q Consensus 49 ~~~pl~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~c~----~C~~~~~~~y~p~~S~v~c~~~~C~~~~ 124 (335)
...||.+ +.+.+|+++|.||||||++.|+|||||+++||+|. +|. .|. .++.|+|++|+ +++
T Consensus 3 ~~~~l~n--~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~-~C~~~~~~C~--~~~~y~p~~Ss------T~~--- 68 (97)
T 1lya_A 3 IPEVLKN--YMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI-HCKLLDIACW--IHHKYNSDKSS------TYV--- 68 (97)
T ss_dssp EEEEEEE--ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT-TCCTTCHHHH--TSCCBCGGGCT------TCE---
T ss_pred ceEeeEE--CCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc-CccCcccccC--CCCCCCchhCC------Cce---
Confidence 3567763 56789999999999999999999999999999999 896 575 47889998874 111
Q ss_pred CCCCCCCCCCCCCeeEEEeCCCCeEEEEEEEEEEEee
Q 019849 125 LPENIRCEANDQCDYEVLYADHGSSLGVLVTDHFPLR 161 (335)
Q Consensus 125 ~~~~~~c~~~~~~~~~~~Y~~Gs~~~G~~~~D~v~~~ 161 (335)
..+|.|.+.|++|+ +.|.+++|+|+|+
T Consensus 69 ---------~~~~~~~i~Yg~Gs-~~G~~~~Dtv~i~ 95 (97)
T 1lya_A 69 ---------KNGTSFDIHYGSGS-LSGYLSQDTVSVP 95 (97)
T ss_dssp ---------EEEEEEEEECSSCE-EEEEEEEEEEEES
T ss_pred ---------eCCCcEEEEECCcE-EEEEEEEEEEEEC
Confidence 14689999999994 9999999999995
No 37
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=81.16 E-value=1.4 Score=34.85 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=27.0
Q ss_pred CCeeEEEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 59 PLGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 59 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
..+.+++++.|+- ++++++||||++.+-+...
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccCHH
Confidence 4567899999984 8999999999999888653
No 38
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.10 E-value=1.6 Score=33.14 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=25.1
Q ss_pred EEEEEeC---CCCcEEEEEEeCCCCceeEecC
Q 019849 64 SVTLKIG---NPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 64 ~~~i~iG---tP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.++|.|| +|+|.+..++|||-.++-+...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 4667776 7899999999999999999876
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=79.76 E-value=2 Score=32.21 Aligned_cols=27 Identities=19% Similarity=0.272 Sum_probs=23.5
Q ss_pred EEEEEEeCCCCcEEEEEEeCCCCceeEec
Q 019849 63 YSVTLKIGNPPKLYELDIDTGSDLTWVQC 91 (335)
Q Consensus 63 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~ 91 (335)
-++.|.||- |.+++++|||..++-+..
T Consensus 9 P~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 357899995 999999999999999973
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=79.18 E-value=2.5 Score=31.31 Aligned_cols=27 Identities=44% Similarity=0.511 Sum_probs=23.7
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 64 SVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 64 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.+++.||- |.+++++|||..++-+...
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecc
Confidence 47899985 9999999999999999755
No 41
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=75.00 E-value=2.6 Score=33.23 Aligned_cols=29 Identities=17% Similarity=0.296 Sum_probs=24.0
Q ss_pred EEeCcEEccccCccEEEeccccceeeCHHHHHHH
Q 019849 262 LLFGGKSTGIKGLQIIFDSGSSYTYFNSQAYKTT 295 (335)
Q Consensus 262 i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~~~~l 295 (335)
+.+||+. ..++||||++.+.++++..+.+
T Consensus 31 v~InG~~-----~~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYP-----VKAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEE-----EEEEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEE-----EEEEEECCCCccccCHHHHHHc
Confidence 6688884 3599999999999998887765
No 42
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=72.97 E-value=2.6 Score=33.62 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=24.4
Q ss_pred EEeCcEEccccCccEEEeccccceeeCHHHHHHH
Q 019849 262 LLFGGKSTGIKGLQIIFDSGSSYTYFNSQAYKTT 295 (335)
Q Consensus 262 i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~~~~l 295 (335)
+.+||+.+ .++||||++.+.++.+..+.+
T Consensus 29 ~~Ing~~v-----~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 29 CKVNGHPL-----KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp EEETTEEE-----EEEECTTCSSCEEEHHHHHHT
T ss_pred EEECCEEE-----EEEEeCCCCcEeeCHHHHHHc
Confidence 44787754 589999999999999998876
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=71.48 E-value=3.6 Score=32.78 Aligned_cols=31 Identities=13% Similarity=0.239 Sum_probs=26.8
Q ss_pred CeeEEEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 60 LGYYSVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 60 ~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
...|++++.|.. ++++++||||++.+.+...
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHH
Confidence 457889999974 9999999999999998765
No 44
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=70.96 E-value=5.6 Score=29.44 Aligned_cols=27 Identities=33% Similarity=0.263 Sum_probs=23.6
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 64 SVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 64 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
++++.||- |.+++++|||..++-+...
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCc
Confidence 47899985 9999999999999999655
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=66.30 E-value=5.9 Score=30.21 Aligned_cols=27 Identities=19% Similarity=0.255 Sum_probs=23.1
Q ss_pred EEEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 63 YSVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 63 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
=++ |.||- |.+++++|||..++-+...
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEEGG
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEccc
Confidence 345 99984 9999999999999999765
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=59.19 E-value=11 Score=28.65 Aligned_cols=27 Identities=33% Similarity=0.523 Sum_probs=23.9
Q ss_pred EEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 64 SVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 64 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.+.+.||- |.++.++|||-.++-+...
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGG
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecc
Confidence 47788985 9999999999999999876
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=48.89 E-value=17 Score=28.26 Aligned_cols=29 Identities=28% Similarity=0.369 Sum_probs=24.4
Q ss_pred eEEEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 62 YYSVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 62 ~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.-.+++.|+- |.+..++|||.+++-+...
T Consensus 22 RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVGG--QPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEECC--EEEEEEEeCCCCeEEEccc
Confidence 4457899985 9999999999999998654
No 48
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.21 E-value=23 Score=29.68 Aligned_cols=28 Identities=39% Similarity=0.431 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 63 YSVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 63 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
-.++|.||- |.++.++|||.+++-+...
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEecc
Confidence 458899995 9999999999999999654
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=41.13 E-value=22 Score=27.32 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=17.2
Q ss_pred cEEEEEEeCCCCceeEecC
Q 019849 74 KLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 74 q~~~v~~DTGSs~~Wv~~~ 92 (335)
|.++.++|||-.++-+...
T Consensus 30 q~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 30 VYITALLDSGADITIISEE 48 (124)
T ss_dssp EEEEEEECTTCSSCEEETT
T ss_pred EEEEEEecCCCCcEEEecc
Confidence 7789999999999999865
No 50
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=37.19 E-value=34 Score=30.40 Aligned_cols=42 Identities=29% Similarity=0.475 Sum_probs=28.3
Q ss_pred CCcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHHH
Q 019849 239 SGIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQA 291 (335)
Q Consensus 239 g~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~ 291 (335)
|.+...|+..+ ..|.++ |.+|.+. ..++||||++.+.+|..-
T Consensus 4 g~v~~~~~~~~---~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTAND---EEYITP---VTIGGTT-----LNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGG---SCEEEE---EEETTEE-----EEEEEETTCCCEEECBTT
T ss_pred CceeeeecCCC---CEEEEE---EEECCEE-----EEEEEeCCCcceEEecCC
Confidence 34445565533 466654 6788443 469999999999998753
No 51
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=37.13 E-value=28 Score=29.48 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=23.6
Q ss_pred eeEEEE---EEeCCC-----CcEEEEEEeCCCCceeEecC
Q 019849 61 GYYSVT---LKIGNP-----PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 61 ~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 92 (335)
++|.+. |.||.. .....++||||++++++|..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 356554 677752 34578999999999999864
No 52
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=36.91 E-value=27 Score=31.97 Aligned_cols=35 Identities=14% Similarity=0.353 Sum_probs=23.6
Q ss_pred EeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCH
Q 019849 244 TPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNS 289 (335)
Q Consensus 244 ~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~ 289 (335)
.|+.++.....|.+. |.+|. +++||||++.+++|-
T Consensus 5 ~pv~~~~~~~~Y~~~---i~iGt--------Pv~~DTGSs~lWv~c 39 (381)
T 1t6e_X 5 APVTKDPATSLYTIP---FHDGA--------SLVLDVAGPLVWSTC 39 (381)
T ss_dssp EEEEECTTTCCEEEE---EETTE--------EEEEETTCCCEEECC
T ss_pred EeEEecCCCcEEEEE---EeCCC--------EEEEECCCCceEEeC
Confidence 455533323566655 55663 299999999999994
No 53
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=36.36 E-value=36 Score=30.69 Aligned_cols=44 Identities=23% Similarity=0.400 Sum_probs=29.6
Q ss_pred CCCcEEEeCccCCCCCceEEeeeEEEeC--cEEccccCccEEEeccccceeeCHH
Q 019849 238 SSGIAWTPMSRDLLEKHYSSGPAELLFG--GKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 238 ~g~l~~~p~~~~~~~~~~~v~~~~i~v~--g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
+|.+...|+....+ ..|.+. |.|| .+. ..++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~-~~Y~~~---i~iGtP~q~-----~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDL-EEYAIP---VSIGTPGQD-----FYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTT-TEEEEE---EEETTTTEE-----EEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCC-CEEEEE---EEECCCCcE-----EEEEEcCCCCCeEECCC
Confidence 35666677765322 466654 6677 333 46999999999999865
No 54
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=36.28 E-value=37 Score=30.13 Aligned_cols=44 Identities=25% Similarity=0.417 Sum_probs=27.7
Q ss_pred CcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHH
Q 019849 240 GIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 240 ~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
+....|+....+ ..|.+. |.+|.- .....++||||++.+++|..
T Consensus 2 ~~~~~~l~n~~~-~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLD-SQYFGK---IYLGTP---PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETT-TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccC-CEEEEE---EEECCC---CeEEEEEEeCCccceEEcCC
Confidence 344566654322 456554 667731 11246999999999999864
No 55
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=33.62 E-value=37 Score=28.62 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=21.3
Q ss_pred EEEeCCC----CcEEEEEEeCCCCceeEecC
Q 019849 66 TLKIGNP----PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 66 ~i~iGtP----~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.|.||.- .....+++|||++.+++|..
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 5678763 34678999999999999875
No 56
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=31.42 E-value=43 Score=29.72 Aligned_cols=27 Identities=22% Similarity=0.369 Sum_probs=21.1
Q ss_pred EEEeCCC--CcEEEEEEeCCCCceeEecC
Q 019849 66 TLKIGNP--PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 66 ~i~iGtP--~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.|.||.+ .....++||||++.+++|..
T Consensus 201 ~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 201 RATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp EEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred EEEECCEecCCCceEEEecCCccEECCHH
Confidence 4677762 34578999999999999875
No 57
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=30.69 E-value=55 Score=29.05 Aligned_cols=27 Identities=19% Similarity=0.293 Sum_probs=21.4
Q ss_pred EEEeCCC---CcEEEEEEeCCCCceeEecC
Q 019849 66 TLKIGNP---PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 66 ~i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 92 (335)
.|.||.- .....++||||++.+++|..
T Consensus 200 ~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 229 (329)
T 1oew_A 200 GYAVGSGTFKSTSIDGIADTGTTLLYLPAT 229 (329)
T ss_dssp EEEETTSCCEEEEEEEEECTTCCSEEECHH
T ss_pred eEEECCeeccCCCceEEEeCCCCCEECCHH
Confidence 4678763 34678999999999999875
No 58
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=30.65 E-value=45 Score=30.94 Aligned_cols=45 Identities=11% Similarity=0.268 Sum_probs=29.8
Q ss_pred CcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHH
Q 019849 240 GIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 240 ~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
+....|+..+.....|.+. |.+|.- ..+..++||||++++++|-+
T Consensus 7 ~~~~~pv~~d~~~~~Y~~~---i~iGTP---pq~~~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 7 SALVVPVKKDASTLQYVTT---INQRTP---LVSENLVVDLGGRFLWVDCD 51 (413)
T ss_dssp SEEEEEEEECTTTCCEEEE---EEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred ccEEEEeeecCCCCeEEEE---EEcCCC---CcceEEEEeCCChhhhcccC
Confidence 4445777766543556654 566642 12357999999999999863
No 59
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=29.56 E-value=51 Score=29.28 Aligned_cols=40 Identities=23% Similarity=0.384 Sum_probs=27.7
Q ss_pred eeeeeeCCCCCeeEEEE---EEeCC---CCcEEEEEEeCCCCceeEecC
Q 019849 50 VFPITGNVYPLGYYSVT---LKIGN---PPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 50 ~~pl~~~~~~~~~Y~~~---i~iGt---P~q~~~v~~DTGSs~~Wv~~~ 92 (335)
-+|+.. ..++|.+. |.||. +.+...++||||++++++|..
T Consensus 185 ~~p~~~---~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~ 230 (329)
T 3c9x_A 185 YTPVDN---SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDN 230 (329)
T ss_dssp EEECBC---TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHH
T ss_pred EEEccC---CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHH
Confidence 455541 23456554 56775 246789999999999999875
No 60
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=29.48 E-value=39 Score=30.03 Aligned_cols=41 Identities=27% Similarity=0.464 Sum_probs=27.8
Q ss_pred CcEEEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHHH
Q 019849 240 GIAWTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQA 291 (335)
Q Consensus 240 ~l~~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~~ 291 (335)
.+...|+..+ ..|.++ |.+|.+. ..++||||++.+++|..-
T Consensus 5 ~v~~~~~~~~---~~Y~~~---i~iG~q~-----~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 5 SVTTNPTSND---EEYITQ---VTVGDDT-----LGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEECGGG---CCEEEE---EEETTEE-----EEEEEETTCCCEEECBTT
T ss_pred ceeeeEcCCC---CEEEEE---EEECCEE-----EEEEEcCCCcceEEecCC
Confidence 4445565433 366654 6788443 469999999999998753
No 61
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=28.56 E-value=61 Score=28.70 Aligned_cols=32 Identities=25% Similarity=0.478 Sum_probs=23.8
Q ss_pred eeEEEE---EEeCCC---CcEEEEEEeCCCCceeEecC
Q 019849 61 GYYSVT---LKIGNP---PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 61 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 92 (335)
++|.+. |.||.- .+...++||||++.+++|..
T Consensus 188 ~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~ 225 (325)
T 1ibq_A 188 GYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDE 225 (325)
T ss_dssp SSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHH
T ss_pred ceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHH
Confidence 445444 677762 35689999999999999865
No 62
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=28.06 E-value=56 Score=29.99 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=26.5
Q ss_pred EEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHH
Q 019849 243 WTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 243 ~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
..|+..+.....|.+. |.||.- .....++||||++.+++|-.
T Consensus 11 ~~pl~~~~~~~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGSTGLHWAN---LQKRTP---LMQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTTCCEEEE---EEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred EEeeecCCCCceEEEE---EECCCC---CceeEEEEECCCCceeECCC
Confidence 4566633222466654 667731 12256999999999999854
No 63
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=27.49 E-value=56 Score=29.07 Aligned_cols=39 Identities=18% Similarity=0.375 Sum_probs=25.0
Q ss_pred EeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHH
Q 019849 244 TPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 244 ~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
.|+.... ..|.+. |.+|.- .....++||||++.+++|..
T Consensus 5 ~~l~~~~--~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEG--PSYAAD---IVVGSN---QQKQTVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECS--SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred EEEecCC--cEEEEE---EEEcCC---CcEEEEEEcCCCCCEEEecC
Confidence 3544443 466654 667721 11246999999999999854
No 64
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=26.85 E-value=58 Score=28.93 Aligned_cols=40 Identities=20% Similarity=0.268 Sum_probs=25.9
Q ss_pred EEeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHH
Q 019849 243 WTPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 243 ~~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
-.|+.... ..|.+. |.||.- .....++||||++.+++|..
T Consensus 4 ~~~l~~~~--~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 4 SLSLINEG--PSYASK---VSVGSN---KQQQTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEEECS--SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred eeEEEcCC--CEEEEE---EEEcCC---CcEEEEEEeCCCCceEEecC
Confidence 34555443 466655 567731 11246999999999999854
No 65
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=26.74 E-value=61 Score=28.87 Aligned_cols=38 Identities=24% Similarity=0.461 Sum_probs=24.5
Q ss_pred EeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCH
Q 019849 244 TPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNS 289 (335)
Q Consensus 244 ~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~ 289 (335)
+|+.... ..|.+. |.||.- .....++||||++.+++|.
T Consensus 5 ~~l~n~~--~~Y~~~---i~iGTP---~q~~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 5 VPATNQL--VDYVVN---VGVGSP---ATTYSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEECS--SCEEEE---EEETTT---TEEEEEEEETTCCCCEECS
T ss_pred EeeeccC--cEEEEE---EEECCC---CcEEEEEEeCCChhheecC
Confidence 4554432 356654 667731 1124699999999999985
No 66
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=25.41 E-value=80 Score=28.07 Aligned_cols=39 Identities=21% Similarity=0.422 Sum_probs=24.6
Q ss_pred EeCccCCCCCceEEeeeEEEeCcEEccccCccEEEeccccceeeCHH
Q 019849 244 TPMSRDLLEKHYSSGPAELLFGGKSTGIKGLQIIFDSGSSYTYFNSQ 290 (335)
Q Consensus 244 ~p~~~~~~~~~~~v~~~~i~v~g~~~~~~~~~~iiDSGTs~~~lp~~ 290 (335)
.|+.... ..|.+. |.+|.- ..+..++||||++.+++|..
T Consensus 5 ~~l~~~~--~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 5 VTLHNEA--ITYTAD---ITVGSD---NQKLNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEECS--SCEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred EEEecCC--eEEEEE---EEECCC---CcEEEEEEeCCCCCeEEecC
Confidence 3444432 466654 667721 11246999999999999844
No 67
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=22.52 E-value=79 Score=26.38 Aligned_cols=28 Identities=39% Similarity=0.431 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCcEEEEEEeCCCCceeEecC
Q 019849 63 YSVTLKIGNPPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 63 Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~ 92 (335)
=.+++.||- |.++.++|||..++-+...
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSC
T ss_pred CcEEEEECC--EEEeeeecccCCceeeecc
Confidence 458899985 9999999999999999654
No 68
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=21.85 E-value=68 Score=30.42 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=23.4
Q ss_pred eeEEEE---EEeCC-----CCcEEEEEEeCCCCceeEecC
Q 019849 61 GYYSVT---LKIGN-----PPKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 61 ~~Y~~~---i~iGt-----P~q~~~v~~DTGSs~~Wv~~~ 92 (335)
++|.+. |.||. +.....+++|||++++++|..
T Consensus 231 ~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~ 270 (478)
T 1qdm_A 231 GYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTA 270 (478)
T ss_dssp TTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHH
T ss_pred CeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHH
Confidence 355544 56764 235678999999999999864
No 69
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=20.58 E-value=70 Score=29.27 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=23.9
Q ss_pred eeEEE---EEEeCCC----CcEEEEEEeCCCCceeEecC
Q 019849 61 GYYSV---TLKIGNP----PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 61 ~~Y~~---~i~iGtP----~q~~~v~~DTGSs~~Wv~~~ 92 (335)
++|.+ .|.||.- .....+++|||++++++|..
T Consensus 242 ~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~ 280 (383)
T 2x0b_A 242 GVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTS 280 (383)
T ss_dssp TSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHH
T ss_pred ceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHH
Confidence 45544 4678763 25678999999999999865
No 70
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=20.03 E-value=78 Score=27.97 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=23.7
Q ss_pred eeEEE---EEEeCCC-----CcEEEEEEeCCCCceeEecC
Q 019849 61 GYYSV---TLKIGNP-----PKLYELDIDTGSDLTWVQCN 92 (335)
Q Consensus 61 ~~Y~~---~i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 92 (335)
++|.+ .|.||.- .....++||||++.+++|..
T Consensus 189 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~ 228 (329)
T 1htr_B 189 LYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQ 228 (329)
T ss_dssp SSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGG
T ss_pred ceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHH
Confidence 34544 4677752 34578999999999999976
Done!