Query 019854
Match_columns 335
No_of_seqs 190 out of 1477
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 05:04:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019854.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019854hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 3E-105 6E-110 765.8 22.9 293 30-329 22-324 (324)
2 cd00693 secretory_peroxidase H 100.0 1.3E-98 3E-103 717.8 23.9 293 32-328 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 3.5E-72 7.7E-77 518.9 10.1 228 49-293 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 3.6E-69 7.8E-74 510.0 19.7 230 47-326 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.9E-66 4.1E-71 486.0 18.0 229 44-314 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 1.4E-64 2.9E-69 472.1 18.0 230 36-314 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 3.7E-64 8.1E-69 483.6 19.5 238 45-331 16-289 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 2.1E-63 4.6E-68 463.4 18.5 219 47-314 18-248 (251)
9 cd00314 plant_peroxidase_like 100.0 1.5E-59 3.3E-64 440.2 15.4 223 48-310 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 3.9E-57 8.5E-62 441.6 18.1 259 47-319 45-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 6.7E-54 1.5E-58 442.5 18.2 258 47-319 55-408 (716)
12 PRK15061 catalase/hydroperoxid 100.0 9E-51 2E-55 417.3 18.3 260 46-319 56-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 1.2E-50 2.5E-55 377.8 8.9 213 55-310 33-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 4.9E-41 1.1E-45 316.8 14.8 220 51-312 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 8.7E-36 1.9E-40 308.3 14.4 220 48-313 429-710 (716)
16 PRK15061 catalase/hydroperoxid 100.0 3.5E-35 7.7E-40 302.4 15.8 220 51-313 442-722 (726)
17 COG0376 KatG Catalase (peroxid 100.0 7.5E-31 1.6E-35 259.6 17.2 251 48-312 71-416 (730)
18 COG0376 KatG Catalase (peroxid 99.5 3.9E-14 8.5E-19 141.5 10.9 216 51-312 452-725 (730)
19 PF07172 GRP: Glycine rich pro 66.2 5.5 0.00012 32.2 2.6 14 1-14 1-14 (95)
20 PTZ00411 transaldolase-like pr 61.7 25 0.00053 34.8 6.7 60 142-201 180-252 (333)
21 PF11895 DUF3415: Domain of un 42.2 21 0.00046 28.0 2.2 29 297-329 3-31 (80)
22 TIGR00874 talAB transaldolase. 33.1 1.4E+02 0.0031 29.3 6.9 58 142-200 168-239 (317)
23 KOG0427 Ubiquitin conjugating 26.3 36 0.00078 29.2 1.3 43 13-74 116-158 (161)
24 KOG0400 40S ribosomal protein 24.7 40 0.00086 29.0 1.2 33 173-205 31-64 (151)
25 PLN02161 beta-amylase 22.1 1.2E+02 0.0027 31.8 4.4 36 286-325 234-274 (531)
26 PRK12346 transaldolase A; Prov 20.4 54 0.0012 32.2 1.4 76 125-201 150-241 (316)
27 PF08782 c-SKI_SMAD_bind: c-SK 20.1 33 0.00072 27.9 -0.1 14 71-85 4-17 (96)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=2.8e-105 Score=765.83 Aligned_cols=293 Identities=39% Similarity=0.667 Sum_probs=278.2
Q ss_pred CCCCCcCccccCChhHHHHHHHHHHHHHHhCcCcccchhhhhhccccccCCCcccccccCcCCcccccccCCCCcchHHH
Q 019854 30 DPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY 109 (335)
Q Consensus 30 ~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~L~g~~~ 109 (335)
.++|+++||++|||++|+||+++|++++.++|+++|++|||+||||||+||||||||+++ .+|+++++|.+|+||++
T Consensus 22 ~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~---~~Ek~a~~N~~l~Gf~~ 98 (324)
T PLN03030 22 GQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS---NTEKTALPNLLLRGYDV 98 (324)
T ss_pred hccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC---cccccCCCCcCcchHHH
Confidence 457999999999999999999999999999999999999999999999999999999864 37999999999999999
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCCh
Q 019854 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDA 189 (335)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~ 189 (335)
|+.||+++|++||++|||||||||||||||+++|||.|+|++||||+++|...++. +||.|+.++++|++.|+++||+.
T Consensus 99 i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~~ 177 (324)
T PLN03030 99 IDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLNT 177 (324)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCCH
Confidence 99999999999999999999999999999999999999999999999999877764 89999999999999999999999
Q ss_pred hhhhhhcccccccccccccccccccC------CCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHH
Q 019854 190 PGLVALLGSHSVGRTHCVKLVHRLYP------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRN 263 (335)
Q Consensus 190 ~dlVaLsGaHTiG~~hc~~f~~rl~n------~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~ 263 (335)
+|||+||||||||++||.+|.+|+|| .+||+||+.|+..|+..||. .++.+. .+++|+.||.+|||+||+|
T Consensus 178 ~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~-~~~~~~--~~~lD~~Tp~~FDn~Yy~n 254 (324)
T PLN03030 178 QDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQ-NGDGSR--RIALDTGSSNRFDASFFSN 254 (324)
T ss_pred HHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCC-CCCCCc--cccCCCCCCcccccHHHHH
Confidence 99999999999999999999999997 26999999999999999995 222233 5789999999999999999
Q ss_pred hhhcCCCcccccccccCCChHHHHHHHhhcH----HHHHHHHHHHHHHhHhCCCCCCCCCcccccccccc
Q 019854 264 ILDNKGLMMVDHQLATDKRTRPYVKKMAKSQ----DYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 329 (335)
Q Consensus 264 l~~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 329 (335)
|+.++|+|+|||+|+.|++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+|||||+|+++|
T Consensus 255 ll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN 324 (324)
T PLN03030 255 LKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN 324 (324)
T ss_pred HHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence 9999999999999999999999999999875 59999999999999999999999999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.3e-98 Score=717.77 Aligned_cols=293 Identities=44% Similarity=0.753 Sum_probs=280.9
Q ss_pred CCCcCccccCChhHHHHHHHHHHHHHHhCcCcccchhhhhhccccccCCCcccccccCcCCcccccccCCCCcchHHHHH
Q 019854 32 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIE 111 (335)
Q Consensus 32 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~~~~~~~E~~~~~N~~L~g~~~I~ 111 (335)
||+++||++|||++|+||+++|++.+.++++++|++|||+||||||+||||||||+++.++.+|+++++|.+|+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 69999999999999999999999999999999999999999999999999999999887778999999999999999999
Q ss_pred HHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCChhh
Q 019854 112 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPG 191 (335)
Q Consensus 112 ~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~d 191 (335)
.||+++|+.||++||||||||||||+||+++|||.|+|++||+|+.++.+..+ ++||.|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877665 78999999999999999999999999
Q ss_pred hhhhcccccccccccccccccccC-----CCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhh
Q 019854 192 LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILD 266 (335)
Q Consensus 192 lVaLsGaHTiG~~hc~~f~~rl~n-----~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~ 266 (335)
||+|+||||||++||.+|.+|+|| ++||+||+.|+..|+..||. .++.+. .+++|+.||.+|||+||++++.
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~-~~~~~~--~~~lD~~Tp~~FDn~Yy~~l~~ 236 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPA-GGDDDT--LVPLDPGTPNTFDNSYYKNLLA 236 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCC-CCCCCc--cccCCCCCCCccccHHHHHHHh
Confidence 999999999999999999999997 47999999999999999997 332334 6899999999999999999999
Q ss_pred cCCCcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCCCCCCccccccccc
Q 019854 267 NKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 328 (335)
Q Consensus 267 ~~glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 328 (335)
++|+|+|||+|+.|++|+.+|++||.||+.|+++|++||+||++++|+||.+||||++|+++
T Consensus 237 ~~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred cccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=3.5e-72 Score=518.88 Aligned_cols=228 Identities=42% Similarity=0.721 Sum_probs=210.2
Q ss_pred HHHHHHHHHHhCcCcccchhhhhhccccc-cCCCcccccccCcCCcccccccCCCCcc-hHHHHHHHHHHHHhhCCCCCc
Q 019854 49 IREQVKLLYKRHKNTAFSWLRNIFHDCAV-QSCDASLLLDSTRKTLSEKEMDRSFGMR-NFRYIENIKEAVERECPGVVS 126 (335)
Q Consensus 49 Vr~~v~~~~~~~~~~aa~llRL~FHDcfv-~GcDgSilld~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~le~~cp~~VS 126 (335)
||++|++++.++++++|++|||+|||||+ +|||||||+. .+|+++++|.||+ ++++|++||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~-----~~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF-----SAEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS-----TTGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc-----ccccccccccCcceeeechhhHHhhhcccccCCCC
Confidence 79999999999999999999999999999 9999999983 4799999999997 999999999999999999999
Q ss_pred hhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhccccccccccc
Q 019854 127 CADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHC 206 (335)
Q Consensus 127 cADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaHTiG~~hc 206 (335)
|||||+|||++||+.+|||.|+|++||+|+.++...++ .+||.|+.++++|++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999999877 78999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhhcCCCcccccccccCCChHHH
Q 019854 207 VKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPY 286 (335)
Q Consensus 207 ~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~~glL~SD~~L~~d~~t~~~ 286 (335)
.+|. |+|..+||.||+.|+.. .|+. ++ ++ .+++| ||.+|||+||+++++++|+|+||++|+.|++|+.+
T Consensus 155 ~~f~-rl~~~~dp~~d~~~~~~---~C~~-~~--~~--~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~ 223 (230)
T PF00141_consen 155 SSFS-RLYFPPDPTMDPGYAGQ---NCNS-GG--DN--GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPI 223 (230)
T ss_dssp GCTG-GTSCSSGTTSTHHHHHH---SSST-SG--CT--CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHH
T ss_pred cccc-cccccccccccccccee---ccCC-Cc--cc--ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHH
Confidence 9999 99987899999999988 9933 32 22 57888 99999999999999999999999999999999999
Q ss_pred HHHHhhc
Q 019854 287 VKKMAKS 293 (335)
Q Consensus 287 V~~yA~d 293 (335)
|++||+|
T Consensus 224 V~~yA~d 230 (230)
T PF00141_consen 224 VERYAQD 230 (230)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=3.6e-69 Score=510.01 Aligned_cols=230 Identities=28% Similarity=0.422 Sum_probs=209.6
Q ss_pred HHHHHHHHHHHHhCcCcccchhhhhhcccc-------ccCCCcccccccCcCCcccccccCCCCc-chHHHHHHHHHHHH
Q 019854 47 DIIREQVKLLYKRHKNTAFSWLRNIFHDCA-------VQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 118 (335)
Q Consensus 47 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSilld~~~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 118 (335)
+.+++++ ..+.++|.++|.+|||+||||| ++||||||+++ +|+++++|.|| +||++|++||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~------~E~~~~~N~gL~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE------EEYSHGANNGLKIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc------cccCCccccchHHHHHHHHHHHHHc-
Confidence 4556777 4477899999999999999999 89999999984 69999999999 6999999999987
Q ss_pred hhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhccc
Q 019854 119 RECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS 198 (335)
Q Consensus 119 ~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 198 (335)
| +|||||||+||||+||+.+|||.|+|++||+|++++.+ +++||+|+.+++++++.|+++||+++|||+|+||
T Consensus 87 ---~-~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 ---P-KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred ---C-CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 4 89999999999999999999999999999999999863 4689999999999999999999999999999999
Q ss_pred ccccccccccccccc-cCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhhc--CCC--ccc
Q 019854 199 HSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--KGL--MMV 273 (335)
Q Consensus 199 HTiG~~hc~~f~~rl-~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~--~gl--L~S 273 (335)
||||++||. |+ |+ + +++ .||.+|||+||++++.+ +|+ |+|
T Consensus 160 HTiG~ahc~----r~g~~---------------------g---------~~~-~Tp~~FDN~Yy~~ll~~~~~gll~L~S 204 (289)
T PLN02608 160 HTLGRAHPE----RSGFD---------------------G---------PWT-KEPLKFDNSYFVELLKGESEGLLKLPT 204 (289)
T ss_pred ccccccccc----CCCCC---------------------C---------CCC-CCCCccChHHHHHHHcCCcCCcccccc
Confidence 999999995 43 11 1 112 58999999999999998 788 799
Q ss_pred ccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCCCCCCccccccc
Q 019854 274 DHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCN 326 (335)
Q Consensus 274 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 326 (335)
||+|+.|++|+.+|++||.||+.|+++|++||+||++|+|+||.+||+.+.-+
T Consensus 205 D~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 205 DKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred CHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 99999999999999999999999999999999999999999999999988654
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.9e-66 Score=486.03 Aligned_cols=229 Identities=29% Similarity=0.446 Sum_probs=207.2
Q ss_pred hHHHHHHHHHHHHHHhCcCcccchhhhhhccccccCCCccccccc---CcCCcccccccCCCCc-chHHHHHHHHHHHHh
Q 019854 44 QAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDS---TRKTLSEKEMDRSFGM-RNFRYIENIKEAVER 119 (335)
Q Consensus 44 ~~e~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~GcDgSilld~---~~~~~~E~~~~~N~~L-~g~~~I~~iK~~le~ 119 (335)
..++||+++|++.+. +++++|++|||+|||||+ ||+|+++++ +..+.+|+++++|.+| +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 567899999999999 999999999999999994 777776643 3334579999999999 8999999999987
Q ss_pred hCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhcccc
Q 019854 120 ECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSH 199 (335)
Q Consensus 120 ~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGaH 199 (335)
| +||||||||||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++|||+|+|||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 5 7999999999999999999999999999999999998777778899999999999999999999999999999999
Q ss_pred cccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhhcCC--------Cc
Q 019854 200 SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKG--------LM 271 (335)
Q Consensus 200 TiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~~g--------lL 271 (335)
|||++||..+ . | ++ +.+ .||.+|||+||++|+.++| +|
T Consensus 163 TiG~a~c~~~--~-~----------------------~g--------~~~-~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L 208 (253)
T cd00691 163 TLGRCHKERS--G-Y----------------------DG--------PWT-KNPLKFDNSYFKELLEEDWKLPTPGLLML 208 (253)
T ss_pred eeecccccCC--C-C----------------------CC--------CCC-CCCCcccHHHHHHHhcCCCccCcCcceec
Confidence 9999999531 0 1 11 011 5999999999999999999 99
Q ss_pred ccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCC
Q 019854 272 MVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 314 (335)
Q Consensus 272 ~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (335)
+||++|+.|++|+.+|++||.|+++|+++|++||+||+++||.
T Consensus 209 ~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 209 PTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred hhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999985
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=1.4e-64 Score=472.08 Aligned_cols=230 Identities=30% Similarity=0.473 Sum_probs=206.2
Q ss_pred Cccc--cCChhHHHHHHHHHHHHHHhCcCcccchhhhhhc-----ccccc--CCCcccccccCcCCcccccccCCCCc-c
Q 019854 36 NFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFH-----DCAVQ--SCDASLLLDSTRKTLSEKEMDRSFGM-R 105 (335)
Q Consensus 36 ~fY~--~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FH-----Dcfv~--GcDgSilld~~~~~~~E~~~~~N~~L-~ 105 (335)
+||. +-|+.++..|++.+++.+ .+++++|.+|||+|| ||+++ ||||||.+ .+|+++++|.|| +
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~------~~E~~~~~N~gl~~ 76 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF------DAEQAHGANSGIHI 76 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc------cccccCCCccCHHH
Confidence 5665 348899999999999988 789999999999999 88876 99999954 369999999999 8
Q ss_pred hHHHHHHHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHH-
Q 019854 106 NFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAA- 184 (335)
Q Consensus 106 g~~~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~- 184 (335)
||++|++||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 77 ~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~ 148 (250)
T PLN02364 77 ALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQ 148 (250)
T ss_pred HHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHh
Confidence 999999999998 489999999999999999999999999999999999865 46899999999999999997
Q ss_pred cCCChhhhhhhcccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHh
Q 019854 185 IGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNI 264 (335)
Q Consensus 185 ~Gl~~~dlVaLsGaHTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l 264 (335)
+|||++|||+|+||||||++||. |+ + + .+ +++ .||.+|||+||++|
T Consensus 149 ~Gl~~~d~VaLsGaHTiG~~hc~----r~-~-----~---------------~g--------~~~-~tp~~fDn~Yy~~l 194 (250)
T PLN02364 149 MGLSDKDIVALSGAHTLGRCHKD----RS-G-----F---------------EG--------AWT-SNPLIFDNSYFKEL 194 (250)
T ss_pred cCCCHHHheeeecceeeccccCC----CC-C-----C---------------CC--------CCC-CCCCccchHHHHHH
Confidence 59999999999999999999993 32 0 0 01 112 68999999999999
Q ss_pred hhc--CCCcc--cccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCC
Q 019854 265 LDN--KGLMM--VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 314 (335)
Q Consensus 265 ~~~--~glL~--SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (335)
+.+ +|+|. |||+|+.|++|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 195 l~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 195 LSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred hcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 998 89865 999999999999999999999999999999999999999873
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=3.7e-64 Score=483.58 Aligned_cols=238 Identities=26% Similarity=0.326 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHHHHhCc---Ccccchhhhhhccccc------------cCCCcccccccCcCCcccccccCCCCcchHHH
Q 019854 45 AEDIIREQVKLLYKRHK---NTAFSWLRNIFHDCAV------------QSCDASLLLDSTRKTLSEKEMDRSFGMRNFRY 109 (335)
Q Consensus 45 ~e~iVr~~v~~~~~~~~---~~aa~llRL~FHDcfv------------~GcDgSilld~~~~~~~E~~~~~N~~L~g~~~ 109 (335)
+|..|+++|++.+..+. ..|+.+|||+||||++ +|||||||++.+ .|+++++|.||+ ++
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~----~E~~~~~N~gL~--~v 89 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD----IETAFHANIGLD--EI 89 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc----ccccCCCCCCHH--HH
Confidence 58899999999998554 4677799999999996 799999999753 699999999998 99
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHhhcccchhc-cCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCC
Q 019854 110 IENIKEAVERECPGVVSCADILVLSGRDGVVA-LGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGID 188 (335)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~aV~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~ 188 (335)
|+.||..+|+.| ||||||||||||+||+. .|||.|+|++||+|++++.+ +++||.|+.++++|++.|+++||+
T Consensus 90 vd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~---~g~LP~p~~sv~~l~~~F~~~Gf~ 163 (328)
T cd00692 90 VEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAP---DGLVPEPFDSVDKILARFADAGFS 163 (328)
T ss_pred HHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCC
Confidence 999999999998 99999999999999995 59999999999999999864 468999999999999999999999
Q ss_pred hhhhhhhcccccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhh-hc
Q 019854 189 APGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNIL-DN 267 (335)
Q Consensus 189 ~~dlVaLsGaHTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~-~~ 267 (335)
++|||+|+||||||++|. +||+++ .+++| .||.+|||+||+|++ .+
T Consensus 164 ~~E~VaLsGAHTiG~a~~----------~Dps~~----------------------g~p~D-~TP~~FDn~Yf~~ll~~~ 210 (328)
T cd00692 164 PDELVALLAAHSVAAQDF----------VDPSIA----------------------GTPFD-STPGVFDTQFFIETLLKG 210 (328)
T ss_pred HHHHhhhcccccccccCC----------CCCCCC----------------------CCCCC-CCcchhcHHHHHHHHHcC
Confidence 999999999999999982 356543 23678 699999999999987 45
Q ss_pred CC-------------------CcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCCCCCCCccccccccc
Q 019854 268 KG-------------------LMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLA 328 (335)
Q Consensus 268 ~g-------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 328 (335)
++ +|+||++|+.|++|+.+|++||.||++|+++|++||+||++|||. ...+.+|+.|
T Consensus 211 ~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dcs~v 286 (328)
T cd00692 211 TAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDCSDV 286 (328)
T ss_pred CCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccCccc
Confidence 55 499999999999999999999999999999999999999999886 4478899999
Q ss_pred cCC
Q 019854 329 NKL 331 (335)
Q Consensus 329 n~~ 331 (335)
++.
T Consensus 287 ~p~ 289 (328)
T cd00692 287 IPP 289 (328)
T ss_pred CCC
Confidence 963
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=2.1e-63 Score=463.43 Aligned_cols=219 Identities=29% Similarity=0.438 Sum_probs=196.9
Q ss_pred HHHHHHHHHHHHhCcCcccchhhhhhccccc-------cCCCcccccccCcCCcccccccCCCCcc-hHHHHHHHHHHHH
Q 019854 47 DIIREQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDASLLLDSTRKTLSEKEMDRSFGMR-NFRYIENIKEAVE 118 (335)
Q Consensus 47 ~iVr~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgSilld~~~~~~~E~~~~~N~~L~-g~~~I~~iK~~le 118 (335)
+-+++.+.+.+ .+...+|.+|||+||||.+ |||||||++. .|+++++|.||+ ++++|++||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~------~E~~~~~N~gL~~~~~~i~~iK~~~- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP------QELAHDANNGLDIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh------hhccCCCcCChHHHHHHHHHHHHHc-
Confidence 34577777776 4578999999999999975 8999999863 699999999996 999999999998
Q ss_pred hhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhccc
Q 019854 119 RECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS 198 (335)
Q Consensus 119 ~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsGa 198 (335)
++|||||||+||||+||+.+|||.|+|++||+|+.++.+ +++||.|+.++++|++.|+++||+++|||||+||
T Consensus 90 ----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGa 162 (251)
T PLN02879 90 ----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGG 162 (251)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecc
Confidence 479999999999999999999999999999999998854 5789999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhhc--CCC--cccc
Q 019854 199 HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDN--KGL--MMVD 274 (335)
Q Consensus 199 HTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~--~gl--L~SD 274 (335)
||||++||. |. + | .+ .+| .||.+|||+||++|+.+ +|+ |+||
T Consensus 163 HTiG~ah~~----r~-g---------~-----------~g--------~~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD 208 (251)
T PLN02879 163 HTLGRCHKE----RS-G---------F-----------EG--------AWT-PNPLIFDNSYFKEILSGEKEGLLQLPTD 208 (251)
T ss_pred ccccccccc----cc-c---------C-----------CC--------CCC-CCccceeHHHHHHHHcCCcCCCccchhh
Confidence 999999995 31 1 0 01 134 59999999999999998 898 6899
Q ss_pred cccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCCCC
Q 019854 275 HQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPL 314 (335)
Q Consensus 275 ~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~ 314 (335)
++|+.|++|+++|++||.||++||++|++||+||++||+.
T Consensus 209 ~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 209 KALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred HHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999999999999999999975
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=1.5e-59 Score=440.25 Aligned_cols=223 Identities=31% Similarity=0.487 Sum_probs=204.6
Q ss_pred HHHHHHHHHHHhCcCcccchhhhhhcccccc--------CCCcccccccCcCCcccccccCCCCc-chHHHHHHHHHHHH
Q 019854 48 IIREQVKLLYKRHKNTAFSWLRNIFHDCAVQ--------SCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVE 118 (335)
Q Consensus 48 iVr~~v~~~~~~~~~~aa~llRL~FHDcfv~--------GcDgSilld~~~~~~~E~~~~~N~~L-~g~~~I~~iK~~le 118 (335)
.|++.|++.+.+++.+++++|||+||||+++ ||||||+++ +|+++++|.+| +++++|++||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~------~e~~~~~N~~l~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE------PELDRPENGGLDKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc------ccccCcccccHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999996 999999997 39999999997 99999999999998
Q ss_pred hhCCCCCchhHHHHhhcccchhcc--CCCCccccCCCCCCCCch--hhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhh
Q 019854 119 RECPGVVSCADILVLSGRDGVVAL--GGPYIPLKTGRRDGRKSR--AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVA 194 (335)
Q Consensus 119 ~~cp~~VScADilalAar~aV~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVa 194 (335)
. |++|||||||+||+++||+.+ |||.|+|++||+|+..+. ...+..++|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3334567888888999999999999999999999
Q ss_pred hc-ccccc-cccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhhcC----
Q 019854 195 LL-GSHSV-GRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNK---- 268 (335)
Q Consensus 195 Ls-GaHTi-G~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~~---- 268 (335)
|+ ||||| |++||..+..|+ |+ +|..||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~-------------------~~-------------~~~~tp~~fDN~yy~~l~~~~~~~~ 201 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG-------------------SG-------------LWTSTPFTFDNAYFKNLLDMNWEWR 201 (255)
T ss_pred hccCCeeccCcccCCCCCccc-------------------CC-------------CCCCCCCccchHHHHHHhcCCcccc
Confidence 99 99999 999998775553 21 233699999999999999988
Q ss_pred ------------CCcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHh
Q 019854 269 ------------GLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 310 (335)
Q Consensus 269 ------------glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (335)
++|+||++|+.|++|+.+|++||.|+++|+++|++||+||++
T Consensus 202 ~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 202 VGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=3.9e-57 Score=441.59 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHHhC--------cCcccchhhhhhccccc-------cCCC-cccccccCcCCcccccccCCCCc-chHHH
Q 019854 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFRY 109 (335)
Q Consensus 47 ~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~~~~~~~E~~~~~N~~L-~g~~~ 109 (335)
+.|+++|++.+... ...+|.+|||+||++.+ ||++ |+|.+. +|++++.|.+| +++.+
T Consensus 45 ~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~------pe~~~~~N~gL~~a~~~ 118 (409)
T cd00649 45 EALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA------PLNSWPDNVNLDKARRL 118 (409)
T ss_pred HHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc------cccCcHhhhhHHHHHHH
Confidence 68899999999864 47999999999999986 7886 788764 79999999999 78999
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhh---------------------------
Q 019854 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE--------------------------- 162 (335)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~--------------------------- 162 (335)
+++||+++ |..||+||+|+||+.+|||.+|||.|+|.+||.|...+...
T Consensus 119 L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~~~~~~~l~~pl~a 194 (409)
T cd00649 119 LWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKRYSGDRDLENPLAA 194 (409)
T ss_pred HHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccccccchhhccchhh
Confidence 99999998 55799999999999999999999999999999999754320
Q ss_pred --------hhhc--cCCCCCCCHHHHHHHHHHcCCChhhhhhh-cccccccccccccccccccCCCCCCCCcchhHHhh-
Q 019854 163 --------ILEQ--YLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHML- 230 (335)
Q Consensus 163 --------~~~~--~lP~p~~~~~~l~~~F~~~Gl~~~dlVaL-sGaHTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~- 230 (335)
.+++ .||+|..++.+|++.|.+||||++||||| +||||||++||..|.+|+. +||.+++.|++.|+
T Consensus 195 ~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg--~dP~~~~~~~~gLgw 272 (409)
T cd00649 195 VQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG--PEPEAAPIEQQGLGW 272 (409)
T ss_pred hhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC--CCCCcCHHHHHhhcc
Confidence 1223 69999999999999999999999999999 5999999999999999984 79999999999995
Q ss_pred -hcCCCCCCCCCCccccccC---CCCCcccchHHHHHhhh------------------------------------cCCC
Q 019854 231 -HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILD------------------------------------NKGL 270 (335)
Q Consensus 231 -~~Cp~~~~~~~~~~~~~~D---~~Tp~~FDn~Yy~~l~~------------------------------------~~gl 270 (335)
+.||...++++. ...+| ..||.+|||+||++|+. ++||
T Consensus 273 ~~~Cp~g~g~~t~--~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~~~~d~~~~~~~~~~gm 350 (409)
T cd00649 273 KNSYGTGKGKDTI--TSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGENTVPDAHDPSKKHAPMM 350 (409)
T ss_pred cccCCCCCCCCCc--cccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccccCCCccccccccCccc
Confidence 899962222232 45688 47999999999999998 5689
Q ss_pred cccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHh--HhCCCCCCCCC
Q 019854 271 MMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLL--SENNPLTGTKG 319 (335)
Q Consensus 271 L~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km--~~lgv~tg~~G 319 (335)
|+||++|+.|++|+++|++||.|+++||++|++||+|| +.+|+++-..|
T Consensus 351 L~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 351 LTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred chhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 99999999999999999999999999999999999999 68999886655
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=6.7e-54 Score=442.55 Aligned_cols=258 Identities=19% Similarity=0.261 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHhC--------cCcccchhhhhhccccc-------cCCC-cccccccCcCCcccccccCCCCc-chHHH
Q 019854 47 DIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFRY 109 (335)
Q Consensus 47 ~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~~~~~~~E~~~~~N~~L-~g~~~ 109 (335)
+.|+++|++.+... ...+|.+|||+||++.+ |||+ |+|.+. +|++++.|.+| +.+.+
T Consensus 55 ~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~------P~~sw~~N~~Ldka~~l 128 (716)
T TIGR00198 55 AAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA------PLNSWPDNVNLDKARRL 128 (716)
T ss_pred HHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc------cccCchhhhhHHHHHHH
Confidence 46899999999864 47999999999999987 6874 677664 79999999999 78999
Q ss_pred HHHHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCch-----------------------------
Q 019854 110 IENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR----------------------------- 160 (335)
Q Consensus 110 I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~----------------------------- 160 (335)
+++||++ ||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 129 L~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~~~~~~l~~p~a~~ 204 (716)
T TIGR00198 129 LWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSREDRESLENPLAAT 204 (716)
T ss_pred HHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccccccccccccchhh
Confidence 9999886 6999999999999999999999999999999999994321
Q ss_pred --------hhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhc-ccccccccccccccccccCCCCCCCCcchhHHhhh
Q 019854 161 --------AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLH 231 (335)
Q Consensus 161 --------~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~ 231 (335)
+.. ...+|+|..++.+|++.|.+||||++|||||+ ||||||++||.+|.+|+ ++||.+++.|++.|+.
T Consensus 205 ~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl--g~dP~~~~~~~~gLg~ 281 (716)
T TIGR00198 205 EMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI--GPDPEGAPIEEQGLGW 281 (716)
T ss_pred hccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--CCCCCcCHHHHHHhcc
Confidence 111 12699999999999999999999999999995 99999999999999998 5899999999999999
Q ss_pred cCCCC-C-CCCCCccccccC---CCCCcccchHHHHHhhhc----------------------------------CCCcc
Q 019854 232 KCPDA-I-PDPKAVQYVRND---RGTPMVLDNNYYRNILDN----------------------------------KGLMM 272 (335)
Q Consensus 232 ~Cp~~-~-~~~~~~~~~~~D---~~Tp~~FDn~Yy~~l~~~----------------------------------~glL~ 272 (335)
.||.. + +.++. ...+| ..||.+|||+||+||+.+ +++|+
T Consensus 282 ~c~~~~g~g~dt~--~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~p~~~~~~~~~~~~mL~ 359 (716)
T TIGR00198 282 HNQYGKGVGRDTM--TSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEIIPDVEDPNKKHNPIMLD 359 (716)
T ss_pred cCCCCCCCCCCcc--cccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccccccccccccccccccCccc
Confidence 99852 1 11222 35677 469999999999999974 68999
Q ss_pred cccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhH--hCCCCCCCCC
Q 019854 273 VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS--ENNPLTGTKG 319 (335)
Q Consensus 273 SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~~G 319 (335)
||++|..|++++++|++||.|++.|+++|++||+||+ .+|++.-..|
T Consensus 360 SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~y~g 408 (716)
T TIGR00198 360 ADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSRYIG 408 (716)
T ss_pred hhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhhhcC
Confidence 9999999999999999999999999999999999999 5666544333
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=9e-51 Score=417.28 Aligned_cols=260 Identities=18% Similarity=0.268 Sum_probs=223.4
Q ss_pred HHHHHHHHHHHHHhC--------cCcccchhhhhhccccc-------cCCC-cccccccCcCCcccccccCCCCc-chHH
Q 019854 46 EDIIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCD-ASLLLDSTRKTLSEKEMDRSFGM-RNFR 108 (335)
Q Consensus 46 e~iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcD-gSilld~~~~~~~E~~~~~N~~L-~g~~ 108 (335)
.+.|+++|.+.+... ...+|.+|||+||++.+ |||+ |+|.+. +|++++.|.+| +++.
T Consensus 56 ~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~------pe~~w~~N~gL~ka~~ 129 (726)
T PRK15061 56 LEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA------PLNSWPDNVNLDKARR 129 (726)
T ss_pred HHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc------ccccchhhhhHHHHHH
Confidence 357899999998864 47999999999999987 6886 677664 79999999999 7999
Q ss_pred HHHHHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchhh--------------------------
Q 019854 109 YIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE-------------------------- 162 (335)
Q Consensus 109 ~I~~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~-------------------------- 162 (335)
++++||+++ |..||+||+|+||+.+|||.+|||.|+|.+||.|...+...
T Consensus 130 ~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~~r~~~~~~l~~pl 205 (726)
T PRK15061 130 LLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGDERYSGERDLENPL 205 (726)
T ss_pred HHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccccccccccccccch
Confidence 999999998 55799999999999999999999999999999998654321
Q ss_pred ----------hh--hccCCCCCCCHHHHHHHHHHcCCChhhhhhhc-ccccccccccccccccccCCCCCCCCcchhHHh
Q 019854 163 ----------IL--EQYLPDHNDSMSVVLERFAAIGIDAPGLVALL-GSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHM 229 (335)
Q Consensus 163 ----------~~--~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLs-GaHTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L 229 (335)
.+ ...+|+|..++.+|++.|.+||||++|||||+ ||||||++||..|.+|+ ++||.+++.+.+.|
T Consensus 206 ~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl--gpdP~~a~~~~qgL 283 (726)
T PRK15061 206 AAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV--GPEPEAAPIEEQGL 283 (726)
T ss_pred hhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc--CCCCCcCHHHHHhc
Confidence 00 11379999999999999999999999999995 99999999999999998 58999999999998
Q ss_pred h--hcCCCCCCCCCCccccccC---CCCCcccchHHHHHhhhc------------------------------------C
Q 019854 230 L--HKCPDAIPDPKAVQYVRND---RGTPMVLDNNYYRNILDN------------------------------------K 268 (335)
Q Consensus 230 ~--~~Cp~~~~~~~~~~~~~~D---~~Tp~~FDn~Yy~~l~~~------------------------------------~ 268 (335)
. +.||...+.++. ...+| ..||.+|||+||++|+.+ .
T Consensus 284 gw~~~c~~g~g~dt~--tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~~~~~pd~~~~~~~~~~ 361 (726)
T PRK15061 284 GWKNSYGSGKGADTI--TSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAAEDTVPDAHDPSKKHAP 361 (726)
T ss_pred cccccCCCCCCCCCc--cccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccccccCCcccccccccCc
Confidence 5 899962122232 44677 469999999999999974 5
Q ss_pred CCcccccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhH--hCCCCCCCCC
Q 019854 269 GLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLS--ENNPLTGTKG 319 (335)
Q Consensus 269 glL~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~--~lgv~tg~~G 319 (335)
+||+||++|..||+++++|++||.|+++|+++|++||.||+ .+|+++-..|
T Consensus 362 ~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 362 TMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 89999999999999999999999999999999999999994 4776554433
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.2e-50 Score=377.77 Aligned_cols=213 Identities=21% Similarity=0.329 Sum_probs=178.3
Q ss_pred HHHHhCcCcccchhhhhhcccc-------ccCCCcccccccCcCCccccc-ccCCCCcchHHHHHHHHHHHHhhCCCCCc
Q 019854 55 LLYKRHKNTAFSWLRNIFHDCA-------VQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVS 126 (335)
Q Consensus 55 ~~~~~~~~~aa~llRL~FHDcf-------v~GcDgSilld~~~~~~~E~~-~~~N~~L~g~~~I~~iK~~le~~cp~~VS 126 (335)
.+...++++++++|||+||||| ++||||||+++.+ .+|+. .+.|.+|++|+.|+.+ +||
T Consensus 33 ~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~---~~En~G~~~n~~l~~~~~i~~~----------~VS 99 (264)
T cd08201 33 CAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD---RPENIGSGFNTTLNFFVNFYSP----------RSS 99 (264)
T ss_pred cCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC---ChhhccCchhhccccceeeccC----------ccC
Confidence 3445788999999999999999 8999999999742 46777 5566678888877543 599
Q ss_pred hhHHHHhhcccchhccCCCCccccCCCCCCCCchhhhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhcc-cccccccc
Q 019854 127 CADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLG-SHSVGRTH 205 (335)
Q Consensus 127 cADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHTiG~~h 205 (335)
||||||||||+||+.||||.|+|++||+|++++.+. .||.|+.++++|++.|++|||+++|||+|+| |||||++|
T Consensus 100 cADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ah 175 (264)
T cd08201 100 MADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVH 175 (264)
T ss_pred HHHHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeecc
Confidence 999999999999999999999999999999988763 4999999999999999999999999999996 99999999
Q ss_pred cccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchHHHHHhhhcC--C--------Cccccc
Q 019854 206 CVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNK--G--------LMMVDH 275 (335)
Q Consensus 206 c~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~Yy~~l~~~~--g--------lL~SD~ 275 (335)
|..|.++.- |. ...+. ..++| .||.+|||+||.+++.+. + .+.||.
T Consensus 176 c~~f~~~~~----~g-----------------~~~~~--~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~ 231 (264)
T cd08201 176 SEDFPEIVP----PG-----------------SVPDT--VLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDL 231 (264)
T ss_pred cccchhhcC----Cc-----------------cccCC--CCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCccchh
Confidence 998866641 11 00011 34678 699999999999999864 2 368999
Q ss_pred ccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHh
Q 019854 276 QLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSE 310 (335)
Q Consensus 276 ~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~ 310 (335)
.++..+.- ..++.+| +++.|.+.++..|.||.+
T Consensus 232 r~f~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 232 RIFSSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred hheecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 99986543 5677887 799999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=4.9e-41 Score=316.83 Aligned_cols=220 Identities=20% Similarity=0.306 Sum_probs=181.3
Q ss_pred HHHHHHHHhCcCcccchhhhhhccccc-------cCCCcc-cccccCcCCcccccccCCCC--c-chHHHHHHHHHHHHh
Q 019854 51 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSFG--M-RNFRYIENIKEAVER 119 (335)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N~~--L-~g~~~I~~iK~~le~ 119 (335)
+.+++.+......++.||||+||++.+ ||++|+ |.|. +|++++.|.+ | +.+.++++||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~------pe~~w~~N~~~~L~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA------PQKDWEVNEPEELAKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc------cccCcCccCcHHHHHHHHHHHHHHHHhcc
Confidence 677788888888999999999999986 799998 7664 7999999998 8 789999999999832
Q ss_pred h-CCC-CCchhHHHHhhcccchhccCC-----CCccccCCCCCCCCchhhhh--hccCCCCCC------------CHHHH
Q 019854 120 E-CPG-VVSCADILVLSGRDGVVALGG-----PYIPLKTGRRDGRKSRAEIL--EQYLPDHND------------SMSVV 178 (335)
Q Consensus 120 ~-cp~-~VScADilalAar~aV~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~~------------~~~~l 178 (335)
. -++ .||+||+|+||+.+|||.+|| |.|++.+||.|...+..... ...+|.+.. ..+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 1 112 699999999999999999999 99999999999987643211 123454422 34789
Q ss_pred HHHHHHcCCChhhhhhhcccc-cccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccc
Q 019854 179 LERFAAIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLD 257 (335)
Q Consensus 179 ~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FD 257 (335)
++.|.++|||++|||||+||| ++|.+|..++ + |+ |+ .+|.+||
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s~----~----------------------G~-wT---------~~p~~f~ 214 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK----H----------------------GV-FT---------DRPGVLT 214 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCCC----C----------------------CC-Cc---------CCCCccc
Confidence 999999999999999999997 7998874321 1 11 33 4899999
Q ss_pred hHHHHHhhhc--------------------CC-----CcccccccccCCChHHHHHHHhhc--HHHHHHHHHHHHHHhHh
Q 019854 258 NNYYRNILDN--------------------KG-----LMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSE 310 (335)
Q Consensus 258 n~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~ 310 (335)
|.||+||++. .| .+++|..|.+|++.|++|+.||.| +++||+||++||.|+++
T Consensus 215 N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klme 294 (297)
T cd08200 215 NDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMN 294 (297)
T ss_pred cHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh
Confidence 9999999952 12 268899999999999999999998 99999999999999998
Q ss_pred CC
Q 019854 311 NN 312 (335)
Q Consensus 311 lg 312 (335)
+.
T Consensus 295 ld 296 (297)
T cd08200 295 LD 296 (297)
T ss_pred cC
Confidence 74
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=8.7e-36 Score=308.34 Aligned_cols=220 Identities=20% Similarity=0.310 Sum_probs=177.4
Q ss_pred HHHHHHHHH---HHhCcCcccchhhhhhccccc-------cCCCcc-cccccCcCCcccccccCC--CCc-chHHHHHHH
Q 019854 48 IIREQVKLL---YKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRS--FGM-RNFRYIENI 113 (335)
Q Consensus 48 iVr~~v~~~---~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N--~~L-~g~~~I~~i 113 (335)
+|+++|.+. +....-..+.|||++||++.+ ||++|+ |.|. +|++++.| .+| +.+.++++|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~------pe~~w~~N~p~gL~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE------PQKNWPVNEPTRLAKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc------hhcCcccCCHHHHHHHHHHHHHH
Confidence 446555553 556667889999999999986 799998 7664 79999999 799 789999999
Q ss_pred HHHHHhhCCCCCchhHHHHhhcccchhcc---CCC--CccccCCCCCCCCchhhhhhccCC---CC------------CC
Q 019854 114 KEAVERECPGVVSCADILVLSGRDGVVAL---GGP--YIPLKTGRRDGRKSRAEILEQYLP---DH------------ND 173 (335)
Q Consensus 114 K~~le~~cp~~VScADilalAar~aV~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~p------------~~ 173 (335)
|+++.. ..||.||+|+||+.+|||.+ ||| .|++.+||.|...... +++...| .+ ..
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 999831 26999999999999999999 998 5799999999987653 2222222 11 12
Q ss_pred CHHHHHHHHHHcCCChhhhhhhccc-ccccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCC
Q 019854 174 SMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGT 252 (335)
Q Consensus 174 ~~~~l~~~F~~~Gl~~~dlVaLsGa-HTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~T 252 (335)
....|++.|.++|||++|||||+|| |++|++|..++ + |. ++ .+
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s~----~----------------------G~-~T---------~~ 622 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGSK----H----------------------GV-FT---------DR 622 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCCC----C----------------------CC-Cc---------CC
Confidence 3567889999999999999999998 59999985321 0 11 22 48
Q ss_pred CcccchHHHHHhhhcC--------------------C---C--cccccccccCCChHHHHHHHhhcH--HHHHHHHHHHH
Q 019854 253 PMVLDNNYYRNILDNK--------------------G---L--MMVDHQLATDKRTRPYVKKMAKSQ--DYFFKEFSRAI 305 (335)
Q Consensus 253 p~~FDn~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d~--~~F~~~Fa~Am 305 (335)
|.+|||.||+||++.. | + ..+|..|.+|++.|++|+.||+|+ ++||+||++||
T Consensus 623 p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw 702 (716)
T TIGR00198 623 VGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAW 702 (716)
T ss_pred CCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 9999999999998621 2 2 277999999999999999999997 89999999999
Q ss_pred HHhHhCCC
Q 019854 306 TLLSENNP 313 (335)
Q Consensus 306 ~Km~~lgv 313 (335)
.|+++++-
T Consensus 703 ~Klm~ldr 710 (716)
T TIGR00198 703 TKVMNLDR 710 (716)
T ss_pred HHHHhCCC
Confidence 99999874
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=3.5e-35 Score=302.35 Aligned_cols=220 Identities=19% Similarity=0.308 Sum_probs=181.9
Q ss_pred HHHHHHHHhCcCcccchhhhhhccccc-------cCCCcc-cccccCcCCcccccccCCC--Cc-chHHHHHHHHHHHHh
Q 019854 51 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSF--GM-RNFRYIENIKEAVER 119 (335)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N~--~L-~g~~~I~~iK~~le~ 119 (335)
..+++.+....-..+.|||++||++.+ ||++|+ |.|. +|++++.|. +| +.+.++++||+++..
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~------Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNEPAQLAKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc------cccCccccCHHHHHHHHHHHHHHHHHHhh
Confidence 677777778888899999999999986 799998 8774 799999999 89 689999999999964
Q ss_pred hCC--CCCchhHHHHhhcccchhcc---CC--CCccccCCCCCCCCchhhhhh---ccCCCCC------------CCHHH
Q 019854 120 ECP--GVVSCADILVLSGRDGVVAL---GG--PYIPLKTGRRDGRKSRAEILE---QYLPDHN------------DSMSV 177 (335)
Q Consensus 120 ~cp--~~VScADilalAar~aV~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 177 (335)
.-. ..||.||+|+||+.+|||.+ || |.|++.+||.|....... ++ ..+|.+. .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHHH
Confidence 321 25999999999999999999 68 999999999999876432 22 2457543 13478
Q ss_pred HHHHHHHcCCChhhhhhhcccc-cccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCccc
Q 019854 178 VLERFAAIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVL 256 (335)
Q Consensus 178 l~~~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~F 256 (335)
|++.|.++|||++|||||+||| ++|..|-.++ + |. ++ .+|.+|
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S~----~----------------------G~-~T---------~~p~~f 638 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGSK----H----------------------GV-FT---------DRPGVL 638 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCCC----C----------------------CC-Cc---------CCCCcc
Confidence 9999999999999999999997 7888874321 0 11 22 489999
Q ss_pred chHHHHHhhhcC--------------------C---C--cccccccccCCChHHHHHHHhhc--HHHHHHHHHHHHHHhH
Q 019854 257 DNNYYRNILDNK--------------------G---L--MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLS 309 (335)
Q Consensus 257 Dn~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~ 309 (335)
||.||+||++.. | + +.+|..|.+|++.|++|+.||.| +++||+||++||.|++
T Consensus 639 sNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvm 718 (726)
T PRK15061 639 TNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVM 718 (726)
T ss_pred ccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 999999999521 1 1 47899999999999999999999 9999999999999999
Q ss_pred hCCC
Q 019854 310 ENNP 313 (335)
Q Consensus 310 ~lgv 313 (335)
+++-
T Consensus 719 eldr 722 (726)
T PRK15061 719 NLDR 722 (726)
T ss_pred hCCC
Confidence 9873
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.97 E-value=7.5e-31 Score=259.63 Aligned_cols=251 Identities=18% Similarity=0.263 Sum_probs=196.5
Q ss_pred HHHHHHHHHHHhC--------cCcccchhhhhhccccc-------cCCCcccccccCcCCcccccccCCCCc-chHHHHH
Q 019854 48 IIREQVKLLYKRH--------KNTAFSWLRNIFHDCAV-------QSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIE 111 (335)
Q Consensus 48 iVr~~v~~~~~~~--------~~~aa~llRL~FHDcfv-------~GcDgSilld~~~~~~~E~~~~~N~~L-~g~~~I~ 111 (335)
.|...+...+... ...+|.+|||+||-+.+ +|..+ +..+|.++.++|.|.+| +++.++.
T Consensus 71 Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~-----G~qRFaPlnSWPDN~nLDKarRLLW 145 (730)
T COG0376 71 AVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGG-----GQQRFAPLNSWPDNANLDKARRLLW 145 (730)
T ss_pred HHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCC-----CceecccccCCCcccchHHHHHHhh
Confidence 4455566655543 35899999999999987 34433 34456789999999999 7999999
Q ss_pred HHHHHHHhhCCCCCchhHHHHhhcccchhccCCCCccccCCCCCCCCchh------------------------------
Q 019854 112 NIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA------------------------------ 161 (335)
Q Consensus 112 ~iK~~le~~cp~~VScADilalAar~aV~~~GGP~~~v~~GR~D~~~s~~------------------------------ 161 (335)
+||+++ +..||+||+|.|++.+|++.+|++.+.+..||.|-..+..
T Consensus 146 PIKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~Plaavq 221 (730)
T COG0376 146 PIKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQ 221 (730)
T ss_pred hHhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhe
Confidence 999998 6789999999999999999999999999999999876654
Q ss_pred --------hhhhccCCCCCCCHHHHHHHHHHcCCChhhhhhhcc-cccccccccccccccccCCCCCCCCcchhHHhh--
Q 019854 162 --------EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLG-SHSVGRTHCVKLVHRLYPEVDPALNPDHVPHML-- 230 (335)
Q Consensus 162 --------~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVaLsG-aHTiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~-- 230 (335)
.+ ....|+|..+..++++.|++|+++++|.|||++ |||+|++|...-.+-+ +++|.-.+--.+-|-
T Consensus 222 MGLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~v--g~ePe~a~ie~qGlGW~ 298 (730)
T COG0376 222 MGLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASNV--GPEPEAAPIEQQGLGWA 298 (730)
T ss_pred eeeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhhc--CCCccccchhhhccccc
Confidence 12 235789999999999999999999999999976 9999999976422222 566654443344442
Q ss_pred hcCCCCCCCCCCcc---ccccCCCCCcccchHHHHHhhhc-----------------------------------CCCcc
Q 019854 231 HKCPDAIPDPKAVQ---YVRNDRGTPMVLDNNYYRNILDN-----------------------------------KGLMM 272 (335)
Q Consensus 231 ~~Cp~~~~~~~~~~---~~~~D~~Tp~~FDn~Yy~~l~~~-----------------------------------~glL~ 272 (335)
+.|.. +.....++ -+.+. .||++|||.||.+|+.. ..||.
T Consensus 299 ~~~g~-G~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mlt 376 (730)
T COG0376 299 NTYGS-GKGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLT 376 (730)
T ss_pred cccCC-CcCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeec
Confidence 33432 21111111 13343 58999999999999852 14799
Q ss_pred cccccccCCChHHHHHHHhhcHHHHHHHHHHHHHHhHhCC
Q 019854 273 VDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENN 312 (335)
Q Consensus 273 SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lg 312 (335)
+|.+|--||..+++.++|..|++.|.+.|++||.||..-+
T Consensus 377 tDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 377 TDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred cchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999998653
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.53 E-value=3.9e-14 Score=141.52 Aligned_cols=216 Identities=21% Similarity=0.333 Sum_probs=159.8
Q ss_pred HHHHHHHHhCcCcccchhhhhhccccc-------cCCCcc-cccccCcCCcccccccCCC--Cc-chHHHHHHHHHHHHh
Q 019854 51 EQVKLLYKRHKNTAFSWLRNIFHDCAV-------QSCDAS-LLLDSTRKTLSEKEMDRSF--GM-RNFRYIENIKEAVER 119 (335)
Q Consensus 51 ~~v~~~~~~~~~~aa~llRL~FHDcfv-------~GcDgS-illd~~~~~~~E~~~~~N~--~L-~g~~~I~~iK~~le~ 119 (335)
..++..+....-....|+-.+|..+-+ +|.+|. |.|. +.++++.|. -| +-+.+++.|.+.+.
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa------PqkdWevN~P~~l~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA------PQKDWEVNQPAELAKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec------ccccCCCCCHHHHHHHHHHHHHHHHHhc-
Confidence 567777777788888999999998865 688875 6664 689999996 45 67889999998885
Q ss_pred hCCCCCchhHHHHhhcccchhcc---CCCC--ccccCCCCCCCCchhhhhhcc-C-CCC------------CCCHHHHHH
Q 019854 120 ECPGVVSCADILVLSGRDGVVAL---GGPY--IPLKTGRRDGRKSRAEILEQY-L-PDH------------NDSMSVVLE 180 (335)
Q Consensus 120 ~cp~~VScADilalAar~aV~~~---GGP~--~~v~~GR~D~~~s~~~~~~~~-l-P~p------------~~~~~~l~~ 180 (335)
..||.||+|+|++..+||.+ +|-. +|+.+||.|............ | |-. ...-.-|++
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvD 601 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVD 601 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHH
Confidence 46999999999999999986 6755 577899999977653311111 1 211 112345678
Q ss_pred HHHHcCCChhhhhhhcccc-cccccccccccccccCCCCCCCCcchhHHhhhcCCCCCCCCCCccccccCCCCCcccchH
Q 019854 181 RFAAIGIDAPGLVALLGSH-SVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNN 259 (335)
Q Consensus 181 ~F~~~Gl~~~dlVaLsGaH-TiG~~hc~~f~~rl~n~~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~~~~D~~Tp~~FDn~ 259 (335)
.-+-.+||..||++|.||- .+|.-+ ++ ... +|..| .|.++.|.
T Consensus 602 kAqlL~LtapemtVLiGGlRvLg~n~-------------------------------g~-s~~--GVfT~--~pg~Ltnd 645 (730)
T COG0376 602 KAQLLTLTAPEMTVLIGGLRVLGANY-------------------------------GG-SKH--GVFTD--RPGVLTND 645 (730)
T ss_pred HHHHhccCCccceEEEcceEeeccCC-------------------------------CC-Ccc--ceecc--Ccccccch
Confidence 8888999999999999974 333322 11 111 33333 68888888
Q ss_pred HHHHhhhc----------C----------CC-----cccccccccCCChHHHHHHHhhc--HHHHHHHHHHHHHHhHhCC
Q 019854 260 YYRNILDN----------K----------GL-----MMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITLLSENN 312 (335)
Q Consensus 260 Yy~~l~~~----------~----------gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lg 312 (335)
||.||++. + |- -..|..+-+++..|.+.+.||.| ++.|.+||++||.|.+++.
T Consensus 646 FFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 646 FFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 88888862 1 21 24677777889999999999975 8999999999999999875
No 19
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=66.15 E-value=5.5 Score=32.20 Aligned_cols=14 Identities=50% Similarity=0.607 Sum_probs=8.0
Q ss_pred CcchHHHHHHHHHH
Q 019854 1 MGTKAVFLLLALLS 14 (335)
Q Consensus 1 ~~~~~~~~~~~~~~ 14 (335)
|+++..|||.++++
T Consensus 1 MaSK~~llL~l~LA 14 (95)
T PF07172_consen 1 MASKAFLLLGLLLA 14 (95)
T ss_pred CchhHHHHHHHHHH
Confidence 89777554434443
No 20
>PTZ00411 transaldolase-like protein; Provisional
Probab=61.66 E-value=25 Score=34.82 Aligned_cols=60 Identities=18% Similarity=0.231 Sum_probs=36.1
Q ss_pred cCCCCccccCCCCCCCCchhhhhhccCCCC---CCCHHHHHHHHHHcCCC----------hhhhhhhcccccc
Q 019854 142 LGGPYIPLKTGRRDGRKSRAEILEQYLPDH---NDSMSVVLERFAAIGID----------APGLVALLGSHSV 201 (335)
Q Consensus 142 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gl~----------~~dlVaLsGaHTi 201 (335)
+|-..+..+.||.+...-.+.......+.. -..+.++.+.|++.|+. .+|+..|.|+|.+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 376778999999865432221111111211 23467788888888874 4677777777743
No 21
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=42.21 E-value=21 Score=28.02 Aligned_cols=29 Identities=14% Similarity=-0.016 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhHhCCCCCCCCCcccccccccc
Q 019854 297 FFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 329 (335)
Q Consensus 297 F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n 329 (335)
....|..||.||+.||.- -.---+|+.|=
T Consensus 3 m~~~F~~am~KlavLG~d----~~~LiDCSdVI 31 (80)
T PF11895_consen 3 MQSAFKAAMAKLAVLGHD----RSDLIDCSDVI 31 (80)
T ss_dssp HHHHHHHHHHHHCTTTS-----GGGSEE-GGGS
T ss_pred HHHHHHHHHHHHHHhcCC----hhhcccchhhc
Confidence 557899999999999652 12223676553
No 22
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=33.08 E-value=1.4e+02 Score=29.26 Aligned_cols=58 Identities=16% Similarity=0.066 Sum_probs=34.7
Q ss_pred cCCCCccccCCCCCCCCchhhhhhccCC----CCCCCHHHHHHHHHHcCCC----------hhhhhhhccccc
Q 019854 142 LGGPYIPLKTGRRDGRKSRAEILEQYLP----DHNDSMSVVLERFAAIGID----------APGLVALLGSHS 200 (335)
Q Consensus 142 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP----~p~~~~~~l~~~F~~~Gl~----------~~dlVaLsGaHT 200 (335)
+|-..+..+.||.|...-..... ...+ ++-..+.++.+.|++.|+. .+|+.+|.|+|.
T Consensus 168 AGa~~ISPFVgRi~dw~~~~~g~-~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qv~~laG~d~ 239 (317)
T TIGR00874 168 AKVTLISPFVGRILDWYKAATGK-KEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDR 239 (317)
T ss_pred cCCCEEEeecchHhHhhhhccCc-cccccccCchHHHHHHHHHHHHHcCCCcEEEeeccCCHHHHHHHHCCCe
Confidence 47788999999986632221100 0111 1234577788889998885 455566666653
No 23
>KOG0427 consensus Ubiquitin conjugating enzyme [Posttranslational modification, protein turnover, chaperones]
Probab=26.34 E-value=36 Score=29.23 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=27.4
Q ss_pred HHHHHHHhhhhcccCCCCCCCCcCccccCChhHHHHHHHHHHHHHHhCcCcccchhhhhhcc
Q 019854 13 LSFSAVSLRSALAENEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHD 74 (335)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~~~~~aa~llRL~FHD 74 (335)
.|+.+.+-.+++.+ ....-...+|-++|-+. -.|.=-|-+|||
T Consensus 116 vClSIlSMLSSs~e--KqrP~Dn~~Yvk~C~~g-----------------rsPk~TrWwfHD 158 (161)
T KOG0427|consen 116 VCLSILSMLSSSKE--KQRPTDNDRYVKNCKNG-----------------RSPKETRWWFHD 158 (161)
T ss_pred HHHHHHHHHccCcc--ccCCCccchhhhhccCC-----------------CCcccceeeecc
Confidence 35555555555222 23347788999999654 245567899998
No 24
>KOG0400 consensus 40S ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Probab=24.71 E-value=40 Score=29.04 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=26.1
Q ss_pred CCHHHHHHHHHHcCCChhhh-hhhcccccccccc
Q 019854 173 DSMSVVLERFAAIGIDAPGL-VALLGSHSVGRTH 205 (335)
Q Consensus 173 ~~~~~l~~~F~~~Gl~~~dl-VaLsGaHTiG~~h 205 (335)
+++.+.+-.|+++||++.++ |.|--+|-||+++
T Consensus 31 ddvkeqI~K~akKGltpsqIGviLRDshGi~q~r 64 (151)
T KOG0400|consen 31 DDVKEQIYKLAKKGLTPSQIGVILRDSHGIGQVR 64 (151)
T ss_pred HHHHHHHHHHHHcCCChhHceeeeecccCcchhh
Confidence 34556667899999999997 5566799999886
No 25
>PLN02161 beta-amylase
Probab=22.08 E-value=1.2e+02 Score=31.76 Aligned_cols=36 Identities=25% Similarity=0.219 Sum_probs=26.1
Q ss_pred HHHHHhhcHHHHHHHHHHHHHHhH-----hCCCCCCCCCcccccc
Q 019854 286 YVKKMAKSQDYFFKEFSRAITLLS-----ENNPLTGTKGEIRKVC 325 (335)
Q Consensus 286 ~V~~yA~d~~~F~~~Fa~Am~Km~-----~lgv~tg~~GeiR~~C 325 (335)
-++.|. .|.+.|...|.-+. +|.|=-|+.||.|--.
T Consensus 234 plq~Y~----Dfm~SFr~~F~~~~~~~I~eI~VGlGP~GELRYPS 274 (531)
T PLN02161 234 AVQCYE----DFMLSFSTKFEPYIGNVIEEISIGLGPSGELRYPA 274 (531)
T ss_pred HHHHHH----HHHHHHHHHHHHHhcCceEEEEeccccCccccCCC
Confidence 467784 37777777777754 6666678999999754
No 26
>PRK12346 transaldolase A; Provisional
Probab=20.42 E-value=54 Score=32.21 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=43.9
Q ss_pred CchhHHHHhhcccchh--ccCCCCccccCCCCCCCCchhhhhhccCCC----CCCCHHHHHHHHHHcCCC----------
Q 019854 125 VSCADILVLSGRDGVV--ALGGPYIPLKTGRRDGRKSRAEILEQYLPD----HNDSMSVVLERFAAIGID---------- 188 (335)
Q Consensus 125 VScADilalAar~aV~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gl~---------- 188 (335)
|+|-=.+.|....++. .+|-..+..+.||.|...-.... ...++. +-..+.++.+.|++.|+.
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~-~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfRn 228 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKP-MDPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFRR 228 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhccc-cccccccCCChHHHHHHHHHHHHHcCCCcEEEecccCC
Confidence 5554444444444433 34778899999998864322111 011211 123577788889888875
Q ss_pred hhhhhhhcccccc
Q 019854 189 APGLVALLGSHSV 201 (335)
Q Consensus 189 ~~dlVaLsGaHTi 201 (335)
.+|+.+|.|+|.+
T Consensus 229 ~~qi~alaG~d~l 241 (316)
T PRK12346 229 TEQILALAGCDRL 241 (316)
T ss_pred HHHHHHHhCCCEE
Confidence 4666777776643
No 27
>PF08782 c-SKI_SMAD_bind: c-SKI Smad4 binding domain; InterPro: IPR014890 c-SKI is an oncoprotein that inhibits TGF-beta signalling through interaction with Smad proteins []. This protein binds to Smad4 [].; GO: 0005634 nucleus; PDB: 1MR1_C.
Probab=20.09 E-value=33 Score=27.88 Aligned_cols=14 Identities=29% Similarity=1.051 Sum_probs=9.4
Q ss_pred hhccccccCCCcccc
Q 019854 71 IFHDCAVQSCDASLL 85 (335)
Q Consensus 71 ~FHDcfv~GcDgSil 85 (335)
.+|+|| +||.|+..
T Consensus 4 V~HeC~-g~c~G~f~ 17 (96)
T PF08782_consen 4 VYHECF-GGCRGSFI 17 (96)
T ss_dssp EEE-ST-T-EEEEE-
T ss_pred eEEeec-CccceEec
Confidence 479998 89999975
Done!