Query 019857
Match_columns 335
No_of_seqs 123 out of 1181
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:08:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019857.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019857hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 5.1E-79 1.8E-83 573.7 27.7 332 1-334 2-346 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 2.5E-73 8.5E-78 526.7 27.9 289 40-332 4-308 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 4.3E-73 1.5E-77 525.6 22.0 285 41-334 2-294 (319)
4 1odm_A Isopenicillin N synthas 100.0 3.2E-69 1.1E-73 502.9 24.7 284 39-334 5-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 4.6E-70 1.6E-74 504.2 14.1 278 41-334 3-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.9E-65 6.5E-70 466.4 24.4 261 41-333 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 94.9 0.078 2.7E-06 46.2 7.8 79 199-295 99-194 (243)
8 2hbt_A EGL nine homolog 1; pro 94.7 0.78 2.7E-05 39.9 14.0 80 200-295 118-212 (247)
9 2rg4_A Uncharacterized protein 93.5 1.3 4.5E-05 37.6 12.6 44 244-299 166-210 (216)
10 2jig_A Prolyl-4 hydroxylase; h 83.4 2.2 7.6E-05 36.2 6.4 48 246-297 170-218 (224)
11 2iuw_A Alkylated repair protei 81.2 5.5 0.00019 34.2 8.1 84 200-295 127-229 (238)
12 3s57_A Alpha-ketoglutarate-dep 78.4 6.4 0.00022 32.9 7.4 80 200-293 101-200 (204)
13 3itq_A Prolyl 4-hydroxylase, a 78.1 4.5 0.00016 34.2 6.4 103 172-295 94-211 (216)
14 3i3q_A Alpha-ketoglutarate-dep 76.4 15 0.00053 30.8 9.2 79 200-294 106-201 (211)
15 3tht_A Alkylated DNA repair pr 74.1 4.5 0.00015 36.9 5.6 92 200-298 199-315 (345)
16 2dbn_A Hypothetical protein YB 68.3 1.6 5.4E-05 41.2 1.2 54 40-94 98-151 (461)
17 2opi_A L-fuculose-1-phosphate 62.8 3.2 0.00011 35.0 2.0 36 42-77 125-160 (212)
18 3o2g_A Gamma-butyrobetaine dio 59.8 5.8 0.0002 36.7 3.4 51 42-95 122-173 (388)
19 2fk5_A Fuculose-1-phosphate al 58.4 5.6 0.00019 33.1 2.7 36 42-77 117-153 (200)
20 1e4c_P L-fuculose 1-phosphate 56.2 4.7 0.00016 34.0 1.9 36 42-77 122-157 (215)
21 1otj_A Alpha-ketoglutarate-dep 55.7 10 0.00034 33.1 4.1 51 40-93 15-65 (283)
22 1pvt_A Sugar-phosphate aldolas 52.4 6.6 0.00023 33.6 2.2 37 41-77 160-196 (238)
23 1oih_A Putative alkylsulfatase 50.1 15 0.0005 32.4 4.2 53 40-95 25-78 (301)
24 2v9l_A Rhamnulose-1-phosphate 49.0 7.2 0.00025 34.2 2.0 36 42-77 179-214 (274)
25 2irp_A Putative aldolase class 46.8 11 0.00036 31.5 2.6 49 41-90 138-191 (208)
26 3pvj_A Alpha-ketoglutarate-dep 46.1 19 0.00064 31.5 4.2 52 40-94 13-64 (277)
27 3ocr_A Class II aldolase/adduc 41.2 12 0.00041 32.8 2.2 36 42-77 156-192 (273)
28 3r1j_A Alpha-ketoglutarate-dep 40.3 28 0.00097 30.8 4.5 53 40-95 19-72 (301)
29 3ghf_A Septum site-determining 35.0 23 0.00077 26.8 2.6 36 45-80 51-86 (120)
30 4ay7_A Methylcobalamin\: coenz 29.9 1E+02 0.0035 27.5 6.6 42 53-94 303-348 (348)
31 1m5a_B Insulin B chain; alpha 28.3 55 0.0019 18.2 2.7 19 53-71 8-26 (30)
32 1nx8_A CARC, carbapenem syntha 27.9 17 0.00058 31.4 0.8 47 40-93 16-62 (273)
33 2da7_A Zinc finger homeobox pr 27.0 26 0.00088 23.9 1.4 41 153-193 14-54 (71)
34 3m4r_A Uncharacterized protein 26.5 20 0.0007 30.2 1.1 34 43-77 156-190 (222)
35 2x4k_A 4-oxalocrotonate tautom 26.1 55 0.0019 20.5 3.0 24 164-187 17-40 (63)
36 3abf_A 4-oxalocrotonate tautom 24.9 50 0.0017 21.0 2.6 23 165-187 16-38 (64)
37 2z7b_A MLR6791 protein; class 22.8 37 0.0013 29.5 2.1 36 42-77 157-201 (270)
38 3eat_X Pyoverdine biosynthesis 20.9 66 0.0022 28.1 3.3 53 40-95 28-82 (293)
39 1otf_A 4-oxalocrotonate tautom 20.4 98 0.0033 19.3 3.4 24 164-187 14-37 (62)
40 1vm6_A DHPR, dihydrodipicolina 20.1 60 0.002 27.5 2.7 42 44-88 56-98 (228)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=5.1e-79 Score=573.68 Aligned_cols=332 Identities=43% Similarity=0.832 Sum_probs=291.3
Q ss_pred CCchhHHHHHhcCCCCCCCCCCccCCCCCCCCCCC---CC--CCCCCCceeeCCCCC------hHHHHHHHHHHHHHcCe
Q 019857 1 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASAT---YH--GPAPEIPTIDLDDPV------QDRLVRSIAEASREWGI 69 (335)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~---~~--~~~~~iPvIDl~~~~------~~~~~~~l~~A~~~~Gf 69 (335)
|.++.||+|++++.. .||..|++|..+.|.... .. ....+||||||+.+. +.+++++|.+||++|||
T Consensus 2 ~~~~~v~~l~~~~~~--~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GF 79 (356)
T 1gp6_A 2 VAVERVESLAKSGII--SIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGV 79 (356)
T ss_dssp CCCCCHHHHHHTTCS--SCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred CCcccHHHHHhcCCC--CCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCE
Confidence 568899999998755 999999999666554221 00 012379999999973 24588999999999999
Q ss_pred EEEEeCCCChhHHHHHHHHHHHhcCCCHHHhhhhcCCCCCCCccCCCCCccccccCccccccccccccCCCCCCCCCCCC
Q 019857 70 FQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWP 149 (335)
Q Consensus 70 f~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~wP 149 (335)
|||+||||+.++++++++.+++||+||.|+|+++........++||+........+..||+|.|++...+.....+|.||
T Consensus 80 F~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP 159 (356)
T 1gp6_A 80 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159 (356)
T ss_dssp EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCC
Confidence 99999999999999999999999999999999998754212578997654444456789999988765554334578999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHhhhCCC-CccceeEEeeCCCCCCCCCCCccCCCCCCCcee
Q 019857 150 NNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGD-DIEYMLKINYYPPCPRPDLALGVVAHTDLSALT 228 (335)
Q Consensus 150 ~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~~~lr~~~Yp~~~~~~~~~~~~~H~D~~~lT 228 (335)
+.+++|++.+++|++.|.+++.+||++|+++||+++++|.+.+..+ ...+.||++||||++.++..+|+++|||+|+||
T Consensus 160 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT 239 (356)
T 1gp6_A 160 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT 239 (356)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence 9999999999999999999999999999999999999999988621 156789999999999888889999999999999
Q ss_pred EEecCCCCCeeeeeCCceEEccccCCeEEEEeCchhhhhhCCeecccccccccCCCCceeEeEEeeCCCCCC-eeecCCC
Q 019857 229 VLVPNEVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADT-VVGPLPQ 307 (335)
Q Consensus 229 ll~~~~~~GLqv~~~g~W~~v~~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~S~~~F~~P~~d~-~i~p~~~ 307 (335)
||+||.++||||+++|+|++|+|.+|++|||+||+|++||||+|||+.|||+.+++.+|||++||++|+.|+ +|.|+++
T Consensus 240 lL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~ 319 (356)
T 1gp6_A 240 FILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPE 319 (356)
T ss_dssp EEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGG
T ss_pred EEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChh
Confidence 999999999999999999999999999999999999999999999999999998888999999999999999 9999999
Q ss_pred CCCCCCCCCCCCcCHHHHHHHHHhcCC
Q 019857 308 LVDDENPPKYKAKKFKDYSYCKLNKLP 334 (335)
Q Consensus 308 ~~~~~~~~~~~~~~~~e~~~~~~~~~~ 334 (335)
++++++|++|+++||+||+..++++.+
T Consensus 320 ~~~~~~p~~y~~~t~~eyl~~~~~~~~ 346 (356)
T 1gp6_A 320 MVSVESPAKFPPRTFAQHIEHKLFGKE 346 (356)
T ss_dssp GCCSSSCCSSCCEEHHHHHHHHHHHHH
T ss_pred hcCCCCCccCCCccHHHHHHHHHHhcc
Confidence 999999999999999999999887644
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=2.5e-73 Score=526.73 Aligned_cols=289 Identities=22% Similarity=0.357 Sum_probs=254.3
Q ss_pred CCCCceeeCCCC--ChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcCCCHHHhhhhcCCCCCCCccCCCC
Q 019857 40 APEIPTIDLDDP--VQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGT 117 (335)
Q Consensus 40 ~~~iPvIDl~~~--~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~ 117 (335)
+.+||||||+.+ ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++.... ...+||..
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~ 81 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGARGYIP 81 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSG--GGTSEEEC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCC--CCcccccc
Confidence 568999999986 46778999999999999999999999999999999999999999999999998752 25788842
Q ss_pred Cccc--cccCccccccccccccC-CCCC-----CCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHH
Q 019857 118 KLQK--EVEGKKSWVDHLFHRVW-PPSS-----INYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLK 189 (335)
Q Consensus 118 ~~~~--~~~~~~~~~e~~~~~~~-~~~~-----~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 189 (335)
.... ......||+|.|.+... +... ..+|.||+.+|+|++.+++|+++|.+++.+|+++|+++||+++++|.
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 161 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK 161 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTH
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 2211 11246799998765321 1111 23689999999999999999999999999999999999999999999
Q ss_pred hhhCCCCccceeEEeeCCCCCCCCCCCccCCCCCCCceeEEecCCCCCeeeee-CCceEEccccCCeEEEEeCchhhhhh
Q 019857 190 EAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFK-DDRWIDAKYIPNALIIHIGDQIEILS 268 (335)
Q Consensus 190 ~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~H~D~~~lTll~~~~~~GLqv~~-~g~W~~v~~~~g~~vVnvGd~l~~~T 268 (335)
+.+.. +.+.+|++||||++.+...+|+++|||+|+||||+||.++||||+. +|+|++|+|.+|++|||+||+|++||
T Consensus 162 ~~~~~--~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 239 (312)
T 3oox_A 162 PTVQD--GNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLT 239 (312)
T ss_dssp HHHTT--CCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHT
T ss_pred HHhcC--CcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHh
Confidence 99877 5689999999999876555999999999999999999999999986 89999999999999999999999999
Q ss_pred CCeecccccccccCC----CCceeEeEEeeCCCCCCeeecCCCCCCCCCCCCCC-CcCHHHHHHHHHhc
Q 019857 269 NGKYKAVLHRTTVNK----DKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYK-AKKFKDYSYCKLNK 332 (335)
Q Consensus 269 nG~~ks~~HRV~~~~----~~~R~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~~-~~~~~e~~~~~~~~ 332 (335)
||+|||+.|||+.+. ..+|||++||++|+.|++|.|+++++++++|++|+ ++|++||+..|+++
T Consensus 240 nG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 240 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999999998763 46799999999999999999999999999999999 99999999999875
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=4.3e-73 Score=525.58 Aligned_cols=285 Identities=32% Similarity=0.581 Sum_probs=252.1
Q ss_pred CCCceeeCCCCC---hHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcCCCHHHhhhhcCCCCCCCccCCCC
Q 019857 41 PEIPTIDLDDPV---QDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGT 117 (335)
Q Consensus 41 ~~iPvIDl~~~~---~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~ 117 (335)
.+||||||+.++ +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCc
Confidence 479999999873 567899999999999999999999999999999999999999999999998642 247743
Q ss_pred CccccccCccccccccccccCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHhhhCCC-C
Q 019857 118 KLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGD-D 196 (335)
Q Consensus 118 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~ 196 (335)
... ..++.||+|.|++...|. ..+|.||+.++.|++.+++|++.|.+++.+|+++|+++||+++++|.+.+... .
T Consensus 77 ~~~--e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 VQA--EVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp CCC--CGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred ccc--cCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 221 135689999988765443 24679999999999999999999999999999999999999999999988642 2
Q ss_pred ccceeEEeeCCCCCCCCCCCccCCCCCCCceeEEecC-CCCCeeeeeCCceEEccccCCeEEEEeCchhhhhhCCeeccc
Q 019857 197 IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPN-EVPGLQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKYKAV 275 (335)
Q Consensus 197 ~~~~lr~~~Yp~~~~~~~~~~~~~H~D~~~lTll~~~-~~~GLqv~~~g~W~~v~~~~g~~vVnvGd~l~~~TnG~~ks~ 275 (335)
..+.+|++||||+++++...|+++|||+|+||||+|| .++||||+++|+|++|+|.||++|||+||+||+||||+|||+
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~ 232 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSV 232 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecc
Confidence 5578999999999988888999999999999999995 799999999999999999999999999999999999999999
Q ss_pred ccccccCCCCceeEeEEeeCCCCCCeeecCCCCCCCC---CCCCCCCcCHHHHHHHHHhcCC
Q 019857 276 LHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDE---NPPKYKAKKFKDYSYCKLNKLP 334 (335)
Q Consensus 276 ~HRV~~~~~~~R~S~~~F~~P~~d~~i~p~~~~~~~~---~~~~~~~~~~~e~~~~~~~~~~ 334 (335)
.|||+.++.++|||++||++|+.|++|.|++++++++ +|++|++++|+||+..++++.+
T Consensus 233 ~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~ 294 (319)
T 1w9y_A 233 MHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKF 294 (319)
T ss_dssp CEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTC
T ss_pred cceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhc
Confidence 9999998888999999999999999999999999887 5999999999999998887654
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.2e-69 Score=502.89 Aligned_cols=284 Identities=24% Similarity=0.342 Sum_probs=247.1
Q ss_pred CCCCCceeeCCCCC------hHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHh-cCCCHHHhhhhcCCCCCCC
Q 019857 39 PAPEIPTIDLDDPV------QDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEF-FELPQEEKEVYSRPADAKD 111 (335)
Q Consensus 39 ~~~~iPvIDl~~~~------~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~ 111 (335)
+..+||||||+.+. +.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. ++
T Consensus 5 ~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----~G 77 (331)
T 1odm_A 5 SKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI----RA 77 (331)
T ss_dssp CBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC----TT
T ss_pred cCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh----cC
Confidence 35689999999872 3468999999999999999999999 899999999999 9999999999975 12
Q ss_pred ccCCCCCcccc-----ccCccccccccccccCCCC----------CCCCCCCCCC--CcchhhHHHHHHHHHHHHHHHHH
Q 019857 112 VQGYGTKLQKE-----VEGKKSWVDHLFHRVWPPS----------SINYRFWPNN--PPSYRAVNEEYAKYMREVVDKLF 174 (335)
Q Consensus 112 ~~Gy~~~~~~~-----~~~~~~~~e~~~~~~~~~~----------~~~~~~wP~~--~~~f~~~~~~y~~~~~~l~~~ll 174 (335)
+.+++.+.... ..+..||+|.|++...... ..++|.||+. +|+|++.+++|++.|.+++.+|+
T Consensus 78 y~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll 157 (331)
T 1odm_A 78 YNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALL 157 (331)
T ss_dssp TCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 33333221111 0146899999877543211 1247899987 99999999999999999999999
Q ss_pred HHHHhhcCCChhHHHhhhCCCCccceeE--EeeCC------C---CCCCCC-CCccCCCCCCCceeEEecCCCCCeeeee
Q 019857 175 TYLSLGLGVEGGVLKEAAGGDDIEYMLK--INYYP------P---CPRPDL-ALGVVAHTDLSALTVLVPNEVPGLQVFK 242 (335)
Q Consensus 175 ~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~~~~~H~D~~~lTll~~~~~~GLqv~~ 242 (335)
++|+++||+++++|.+.+.. +.+.+| ++||| | +++++. .+|+++|||+|+||||+||.++||||++
T Consensus 158 ~~la~~Lgl~~~~f~~~~~~--~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~ 235 (331)
T 1odm_A 158 KGYALALGKEENFFARHFKP--DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVET 235 (331)
T ss_dssp HHHHHHTTSCTTTTGGGCCT--TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEE
T ss_pred HHHHHHhCCCHHHHHHHhcC--cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEc
Confidence 99999999999999998876 678999 99999 7 766665 7899999999999999999999999995
Q ss_pred -CCceEEccccCCeEEEEeCchhhhhhCCeecccccccccCCCCceeEeEEeeCCCCCCeeecCCCCCCCCCCCCCCCcC
Q 019857 243 -DDRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKK 321 (335)
Q Consensus 243 -~g~W~~v~~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~~~~R~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~~~~~ 321 (335)
+| |++|+|.+|++|||+||+||+||||+|||+.|||+.+ ..+|||++||++|+.|++|.|+++++.+++ ++|++++
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t 312 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLS 312 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCB
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCcc
Confidence 88 9999999999999999999999999999999999864 679999999999999999999999998877 9999999
Q ss_pred HHHHHHHHHhcCC
Q 019857 322 FKDYSYCKLNKLP 334 (335)
Q Consensus 322 ~~e~~~~~~~~~~ 334 (335)
|+||+..++++++
T Consensus 313 ~~e~l~~~~~~~~ 325 (331)
T 1odm_A 313 YGDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=4.6e-70 Score=504.19 Aligned_cols=278 Identities=19% Similarity=0.292 Sum_probs=234.8
Q ss_pred CCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcCCC-HHHhhhhcCCCCCCCccCCCCCc
Q 019857 41 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELP-QEEKEVYSRPADAKDVQGYGTKL 119 (335)
Q Consensus 41 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~~Gy~~~~ 119 (335)
.+||||||+.+......++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++..... ...+||+...
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~-~~~~Gy~~~~ 81 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVP-TMRRGFTGLE 81 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSC-CSSSEEEEC-
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCC-CCCCceeecc
Confidence 47999999976322223499999999999999999999999999999999999999 999999987642 2578995433
Q ss_pred cc------cccCccccccccccccCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCC----ChhHHH
Q 019857 120 QK------EVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV----EGGVLK 189 (335)
Q Consensus 120 ~~------~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl----~~~~~~ 189 (335)
.+ ...+..||+|.|.+... +|.|| ++.|++.+++|++.|.+++.+|+++|+++||+ ++++|.
T Consensus 82 ~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~ 153 (311)
T 1dcs_A 82 SESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL 153 (311)
T ss_dssp ----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH
T ss_pred ccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh
Confidence 22 22457899999876532 57899 89999999999999999999999999999999 888887
Q ss_pred hhhCCCCccceeEEeeCCCCCCCC--C--CCccCCCCCCCceeEEecC-CCCC---eeeeeCCceEEccccCCeEEEEeC
Q 019857 190 EAAGGDDIEYMLKINYYPPCPRPD--L--ALGVVAHTDLSALTVLVPN-EVPG---LQVFKDDRWIDAKYIPNALIIHIG 261 (335)
Q Consensus 190 ~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~~~~~H~D~~~lTll~~~-~~~G---Lqv~~~g~W~~v~~~~g~~vVnvG 261 (335)
+. .+.+|++||||++.++ + .+|+++|||+|+||||+|| .++| |||+++|+|++|+|.+|++|||+|
T Consensus 154 ~~------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiG 227 (311)
T 1dcs_A 154 DC------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCG 227 (311)
T ss_dssp SC------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEEC
T ss_pred hc------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHH
Confidence 64 4689999999998763 3 6789999999999999999 8999 999999999999999999999999
Q ss_pred chhhhhhCCeecccccccccCC-----CCceeEeEEeeCCCCCCeeecCCCCCCCCCCCCC--CCcCHHHHHHHHHhcCC
Q 019857 262 DQIEILSNGKYKAVLHRTTVNK-----DKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY--KAKKFKDYSYCKLNKLP 334 (335)
Q Consensus 262 d~l~~~TnG~~ks~~HRV~~~~-----~~~R~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~ 334 (335)
|+||+||||+|||+.|||+.++ .++|||++||++|+.|++|. +++++++++|++| +++||+||+..++++.+
T Consensus 228 D~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999999999999987 67999999999999999999 9999988899999 99999999998877643
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.9e-65 Score=466.40 Aligned_cols=261 Identities=26% Similarity=0.368 Sum_probs=222.6
Q ss_pred CCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcCCCHHHhhhhcCCCCCCCccCCCCCc-
Q 019857 41 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKL- 119 (335)
Q Consensus 41 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~Gy~~~~- 119 (335)
++||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||++ |+|+++..... ..+||+...
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~--~~~GY~~~~~ 74 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRE--THDGFFPASI 74 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTT--TCCEEECCC-
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCC--CCCccccCcc
Confidence 47999999974 45899999999999999999999999999999999999998 78999876543 578995332
Q ss_pred cc--cccCccccccccccccCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCh--hH---HHhhh
Q 019857 120 QK--EVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEG--GV---LKEAA 192 (335)
Q Consensus 120 ~~--~~~~~~~~~e~~~~~~~~~~~~~~~~wP~~~~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~~~ 192 (335)
.+ ......||+|.|.+. .||..+++|++.+++|+++|.+++.+||++|+++||++. ++ +.+.+
T Consensus 75 ~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 144 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMI 144 (280)
T ss_dssp -------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHH
T ss_pred ccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHh
Confidence 11 112357999987652 477778999999999999999999999999999999763 22 55555
Q ss_pred CCCCccceeEEeeCCCCCCCC--CCCccCCCCCCCceeEEecCCCCCeeeee-CCceEEccccCCeEEEEeCchhhhhhC
Q 019857 193 GGDDIEYMLKINYYPPCPRPD--LALGVVAHTDLSALTVLVPNEVPGLQVFK-DDRWIDAKYIPNALIIHIGDQIEILSN 269 (335)
Q Consensus 193 ~~~~~~~~lr~~~Yp~~~~~~--~~~~~~~H~D~~~lTll~~~~~~GLqv~~-~g~W~~v~~~~g~~vVnvGd~l~~~Tn 269 (335)
... ..+.+|++||||++.++ ..+|+++|||+|+||||+||.++||||+. +|+|++|+|.||++|||+||+|++|||
T Consensus 145 ~~~-~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 223 (280)
T 3on7_A 145 ANS-HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASD 223 (280)
T ss_dssp TTC-SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTT
T ss_pred cCC-ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhC
Confidence 542 23789999999998754 47899999999999999999999999996 899999999999999999999999999
Q ss_pred CeecccccccccCC----CCceeEeEEeeCCCCCCeeecCCCCCCCCCCCCCCCcCHHHHHHHHHhcC
Q 019857 270 GKYKAVLHRTTVNK----DKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNKL 333 (335)
Q Consensus 270 G~~ks~~HRV~~~~----~~~R~S~~~F~~P~~d~~i~p~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 333 (335)
|+|||+.|||+.++ ..+|||++||++|+.|++|.| ++|++||+.+|+++.
T Consensus 224 g~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 224 GYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999999999864 458999999999999999974 489999999999874
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.88 E-value=0.078 Score=46.22 Aligned_cols=79 Identities=18% Similarity=0.109 Sum_probs=53.6
Q ss_pred ceeEEeeCCCCCCCCCCCccCCCCCCC-----------ceeEEec--C----CCCCeeeeeCCceEEccccCCeEEEEeC
Q 019857 199 YMLKINYYPPCPRPDLALGVVAHTDLS-----------ALTVLVP--N----EVPGLQVFKDDRWIDAKYIPNALIIHIG 261 (335)
Q Consensus 199 ~~lr~~~Yp~~~~~~~~~~~~~H~D~~-----------~lTll~~--~----~~~GLqv~~~g~W~~v~~~~g~~vVnvG 261 (335)
.-+++++|.+- --..+|.|.. .+|+++. + ..|.|.+.....=..|+|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 35888999873 2246666653 4565554 3 1244666664444689999999998642
Q ss_pred chhhhhhCCeecccccccccCCCCceeEeEEeeC
Q 019857 262 DQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLE 295 (335)
Q Consensus 262 d~l~~~TnG~~ks~~HRV~~~~~~~R~S~~~F~~ 295 (335)
.++|+|.......|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689998765568999999875
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=94.73 E-value=0.78 Score=39.90 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=54.0
Q ss_pred eeEEeeCCCCCCCCCCCccCCCCCC-----CceeEEec---CC-----CCCeeeeeCC--ceEEccccCCeEEEEeCchh
Q 019857 200 MLKINYYPPCPRPDLALGVVAHTDL-----SALTVLVP---NE-----VPGLQVFKDD--RWIDAKYIPNALIIHIGDQI 264 (335)
Q Consensus 200 ~lr~~~Yp~~~~~~~~~~~~~H~D~-----~~lTll~~---~~-----~~GLqv~~~g--~W~~v~~~~g~~vVnvGd~l 264 (335)
-+.+.+|++. .-....|.|. -.+|+++. ++ .|.|.++.++ ....|.|..|.+|++-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3667888851 1224566665 26777775 21 2447787743 6789999999999886531
Q ss_pred hhhhCCeecccccccccCCCCceeEeEEeeC
Q 019857 265 EILSNGKYKAVLHRTTVNKDKTRMSWPVFLE 295 (335)
Q Consensus 265 ~~~TnG~~ks~~HRV~~~~~~~R~S~~~F~~ 295 (335)
-.+|.|.. ....|+||+.+++
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899976 4469999988764
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.49 E-value=1.3 Score=37.58 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=33.3
Q ss_pred CceEEccccCCeEEEEeCchhhhhhCCeecccccccccCC-CCceeEeEEeeCCCCC
Q 019857 244 DRWIDAKYIPNALIIHIGDQIEILSNGKYKAVLHRTTVNK-DKTRMSWPVFLEPPAD 299 (335)
Q Consensus 244 g~W~~v~~~~g~~vVnvGd~l~~~TnG~~ks~~HRV~~~~-~~~R~S~~~F~~P~~d 299 (335)
..+..|.|.+|.+||.-+. | .|.|.... .++|+||+|-+.+...
T Consensus 166 ~~~~~i~P~~G~lvlFpS~-l-----------~H~V~p~~~~~~RiSIsFN~~~~~~ 210 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW-L-----------RHEVPMNMAEEDRISVSFNYAWGEG 210 (216)
T ss_dssp CSEEEECCCTTEEEEEETT-S-----------CEEECCCCSSSCEEEEEEEEEC---
T ss_pred CCeeEecCCCCeEEEECCC-C-----------EEeccCCCCCCCEEEEEEEeecCCc
Confidence 4667889999999988664 2 79998855 4689999999987653
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=83.41 E-value=2.2 Score=36.16 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=34.4
Q ss_pred eEEccccCCeEEEEeCchhhhhhCCee-cccccccccCCCCceeEeEEeeCCC
Q 019857 246 WIDAKYIPNALIIHIGDQIEILSNGKY-KAVLHRTTVNKDKTRMSWPVFLEPP 297 (335)
Q Consensus 246 W~~v~~~~g~~vVnvGd~l~~~TnG~~-ks~~HRV~~~~~~~R~S~~~F~~P~ 297 (335)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.......|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 4789999999887653 1233433 5789999776556899999887543
No 11
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=81.17 E-value=5.5 Score=34.19 Aligned_cols=84 Identities=14% Similarity=0.037 Sum_probs=53.8
Q ss_pred eeEEeeCCCCCCCCCCCccCCCCCCC--------ceeEEecCCCCCeeeee-C----------CceEEccccCCeEEEEe
Q 019857 200 MLKINYYPPCPRPDLALGVVAHTDLS--------ALTVLVPNEVPGLQVFK-D----------DRWIDAKYIPNALIIHI 260 (335)
Q Consensus 200 ~lr~~~Yp~~~~~~~~~~~~~H~D~~--------~lTll~~~~~~GLqv~~-~----------g~W~~v~~~~g~~vVnv 260 (335)
..-+|+|.+- .-++++|.|-. +.||-+... .=+.+.. . +..+.+...+|+++|+-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 4467999873 23688888852 333333111 2233332 1 46899999999999999
Q ss_pred CchhhhhhCCeecccccccccCCCCceeEeEEeeC
Q 019857 261 GDQIEILSNGKYKAVLHRTTVNKDKTRMSWPVFLE 295 (335)
Q Consensus 261 Gd~l~~~TnG~~ks~~HRV~~~~~~~R~S~~~F~~ 295 (335)
|++=..|..|.-+.. .....|+|+.|=..
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 998777875554321 13468999999763
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=78.44 E-value=6.4 Score=32.92 Aligned_cols=80 Identities=13% Similarity=0.040 Sum_probs=50.4
Q ss_pred eeEEeeCCCCCCCCCCCccCCCCCCC--------ceeEEecCCCCCeeeee----------CCceEEccccCCeEEEEeC
Q 019857 200 MLKINYYPPCPRPDLALGVVAHTDLS--------ALTVLVPNEVPGLQVFK----------DDRWIDAKYIPNALIIHIG 261 (335)
Q Consensus 200 ~lr~~~Yp~~~~~~~~~~~~~H~D~~--------~lTll~~~~~~GLqv~~----------~g~W~~v~~~~g~~vVnvG 261 (335)
..-+|+|.+. .-+++.|.|-. +++|-+... .-+.+.. .+..+.+...+|+++|+-|
T Consensus 101 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG~~-~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 101 FVLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFGAS-RDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEESC-EEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eeEEEEECCC-----CCcccceecChhhccCCCcEEEEECCCc-eEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 3458899873 23678888862 223333111 2233332 1257889999999999999
Q ss_pred chhhhhhCCeecccccccccC--CCCceeEeEEe
Q 019857 262 DQIEILSNGKYKAVLHRTTVN--KDKTRMSWPVF 293 (335)
Q Consensus 262 d~l~~~TnG~~ks~~HRV~~~--~~~~R~S~~~F 293 (335)
++=..|. |.|-.. ....|+|+.|-
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 9877786 444332 23589999985
No 13
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=78.13 E-value=4.5 Score=34.22 Aligned_cols=103 Identities=15% Similarity=0.043 Sum_probs=59.9
Q ss_pred HHHHHHHhhcCCChhHHHhhhCCCCccceeEEeeCCCCCCCCCCCccCCCCCCC-----------ceeEEec--C-CCCC
Q 019857 172 KLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLS-----------ALTVLVP--N-EVPG 237 (335)
Q Consensus 172 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~H~D~~-----------~lTll~~--~-~~~G 237 (335)
+|.+.|+..+|++.. ..--+++++|.+... ..+|.|.. .+|+++. | ..||
T Consensus 94 ~i~~Ri~~~~gl~~~----------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GG 157 (216)
T 3itq_A 94 KIEKRISSIMNVPAS----------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGG 157 (216)
T ss_dssp HHHHHHHHHHTSCGG----------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEEC
T ss_pred HHHHHHHHhcCceec----------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCc
Confidence 444455555677631 112577888876321 45666653 4777765 2 2233
Q ss_pred eeeeeCCceEEccccCCeEEEEeCchhhhhhCCee-cccccccccCCCCceeEeEEeeC
Q 019857 238 LQVFKDDRWIDAKYIPNALIIHIGDQIEILSNGKY-KAVLHRTTVNKDKTRMSWPVFLE 295 (335)
Q Consensus 238 Lqv~~~g~W~~v~~~~g~~vVnvGd~l~~~TnG~~-ks~~HRV~~~~~~~R~S~~~F~~ 295 (335)
=-+..+ .=+.|+|..|.+++.-.- ..+|.. ..++|+|.......|+++..+++
T Consensus 158 eT~Fp~-~~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 158 ETFFPK-LNLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp CEEETT-TTEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred eeEecC-CCCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEe
Confidence 223322 126789999988876531 112322 46799998755568999988875
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=76.37 E-value=15 Score=30.78 Aligned_cols=79 Identities=18% Similarity=0.125 Sum_probs=49.8
Q ss_pred eeEEeeCCCCCCCCCCCccCCCCCC-----C--ceeEEecCCCCCeeeee---CCceEEccccCCeEEEEeCchhhhhhC
Q 019857 200 MLKINYYPPCPRPDLALGVVAHTDL-----S--ALTVLVPNEVPGLQVFK---DDRWIDAKYIPNALIIHIGDQIEILSN 269 (335)
Q Consensus 200 ~lr~~~Yp~~~~~~~~~~~~~H~D~-----~--~lTll~~~~~~GLqv~~---~g~W~~v~~~~g~~vVnvGd~l~~~Tn 269 (335)
..-+|+|.+. . ++++|.|. + ++|+-+-.. .-+.+.. .+..+.+...+|+++|+-|++- .|
T Consensus 106 ~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~~-~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~-- 175 (211)
T 3i3q_A 106 ACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGLP-AIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF-- 175 (211)
T ss_dssp EEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEESC-EEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC--
T ss_pred EEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCCC-eEEEEecccCCCceEEEECCCCCEEEECchHH-ce--
Confidence 4557889872 3 68899883 1 233333111 2233332 3678899999999999988763 23
Q ss_pred CeecccccccccCC-------CCceeEeEEee
Q 019857 270 GKYKAVLHRTTVNK-------DKTRMSWPVFL 294 (335)
Q Consensus 270 G~~ks~~HRV~~~~-------~~~R~S~~~F~ 294 (335)
.|.|.... ...|+|+.|-.
T Consensus 176 ------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 ------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp ------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred ------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36665532 23699999865
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=74.06 E-value=4.5 Score=36.87 Aligned_cols=92 Identities=16% Similarity=0.200 Sum_probs=59.7
Q ss_pred eeEEeeCCCCCCCCCCCccCCCCCCC------ceeEEecCCCCCeeeee-CCceEEccccCCeEEEEeCchhhhhhCCee
Q 019857 200 MLKINYYPPCPRPDLALGVVAHTDLS------ALTVLVPNEVPGLQVFK-DDRWIDAKYIPNALIIHIGDQIEILSNGKY 272 (335)
Q Consensus 200 ~lr~~~Yp~~~~~~~~~~~~~H~D~~------~lTll~~~~~~GLqv~~-~g~W~~v~~~~g~~vVnvGd~l~~~TnG~~ 272 (335)
..-+|+|.+. -++++|.|-. ++|+=+ ....-+.+.. ++.++.+...+|+++|+-|+.=..|..|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEEC-CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4567889872 2688899884 333333 1112233333 577999999999999999999999977665
Q ss_pred ccccccccc------------------CCCCceeEeEEeeCCCC
Q 019857 273 KAVLHRTTV------------------NKDKTRMSWPVFLEPPA 298 (335)
Q Consensus 273 ks~~HRV~~------------------~~~~~R~S~~~F~~P~~ 298 (335)
+-...-+-. .....|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 543332211 01235999999876654
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=68.31 E-value=1.6 Score=41.20 Aligned_cols=54 Identities=11% Similarity=0.188 Sum_probs=41.1
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcC
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFE 94 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 94 (335)
..-||.|||+.+....+.++..+.+++.||+.|.|. ||.+...+..+...+|.+
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 357999999875433344677789999999998887 898888877777777753
No 17
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=62.81 E-value=3.2 Score=34.95 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=31.9
Q ss_pred CCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 42 EIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 42 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999987777788999999998888999999996
No 18
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=59.83 E-value=5.8 Score=36.69 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=39.6
Q ss_pred CCceeeCCCC-ChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcCC
Q 019857 42 EIPTIDLDDP-VQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFEL 95 (335)
Q Consensus 42 ~iPvIDl~~~-~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 95 (335)
++|.||++.+ .+++...++.+++.++|++.+.+-.++.+ ...+.+++|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 6899999875 35677899999999999999999988754 444556666444
No 19
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=58.44 E-value=5.6 Score=33.15 Aligned_cols=36 Identities=28% Similarity=0.375 Sum_probs=31.8
Q ss_pred CCcee-eCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 42 EIPTI-DLDDPVQDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 42 ~iPvI-Dl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
.||++ ++.....+++++.+.+++++.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 79999 8887777788999999999988999999995
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=56.17 E-value=4.7 Score=33.95 Aligned_cols=36 Identities=19% Similarity=0.219 Sum_probs=31.7
Q ss_pred CCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 42 EIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 42 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999987767788899999998888899999996
No 21
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=55.67 E-value=10 Score=33.11 Aligned_cols=51 Identities=18% Similarity=0.310 Sum_probs=38.4
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhc
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFF 93 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 93 (335)
.++|+-||++..-..+..++|.+++.++|++.+.+-.++.+ +..+.+++|=
T Consensus 15 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 15 GAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp CEEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred eEEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 45677889988434566899999999999999999887654 4455666653
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=52.35 E-value=6.6 Score=33.59 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=31.9
Q ss_pred CCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 41 PEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 41 ~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
..||++++......++++.+.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3699999987666788999999999888999999996
No 23
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=50.09 E-value=15 Score=32.43 Aligned_cols=53 Identities=15% Similarity=0.143 Sum_probs=39.6
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCC-CChhHHHHHHHHHHHhcCC
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHG-IPSDLIGKLQAVGKEFFEL 95 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~l 95 (335)
.+.|+-||++..-..+..++|.+++.++|++.+.+-. ++. ++..+.++.|=.+
T Consensus 25 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 25 GAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp CEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred ceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 3467778998743456689999999999999999887 774 4556666766443
No 24
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=49.04 E-value=7.2 Score=34.21 Aligned_cols=36 Identities=14% Similarity=0.205 Sum_probs=32.0
Q ss_pred CCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 42 EIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 42 ~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
.||++++......++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999987767788999999999999999999996
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=46.78 E-value=11 Score=31.48 Aligned_cols=49 Identities=12% Similarity=0.137 Sum_probs=34.7
Q ss_pred CCCceeeCCCCChHHHHHHHHHHHHHcC---eEEEEeCCCCh--hHHHHHHHHHH
Q 019857 41 PEIPTIDLDDPVQDRLVRSIAEASREWG---IFQVTNHGIPS--DLIGKLQAVGK 90 (335)
Q Consensus 41 ~~iPvIDl~~~~~~~~~~~l~~A~~~~G---ff~l~nhgi~~--~~~~~~~~~~~ 90 (335)
..||++++. ...+++++.+.+++.+.+ .+.|.|||+-. +.+++++..+.
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~ 191 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTE 191 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHH
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHH
Confidence 479999885 556788999999998875 78899999631 23444444443
No 26
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=46.05 E-value=19 Score=31.46 Aligned_cols=52 Identities=12% Similarity=0.228 Sum_probs=39.7
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhcC
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFE 94 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 94 (335)
.++|.=|||+..-..+..++|.+|+.++|.+.+.+-.++.+ +..+.+++|=.
T Consensus 13 Gaei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 13 GAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp CEEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred eEEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 45677899987325567899999999999999999888753 44566777643
No 27
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=41.22 E-value=12 Score=32.77 Aligned_cols=36 Identities=8% Similarity=0.140 Sum_probs=31.4
Q ss_pred CCceeeCCCCC-hHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 42 EIPTIDLDDPV-QDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 42 ~iPvIDl~~~~-~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
.||++|+.... ..++++++.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 69999998764 6678899999999999999999995
No 28
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=40.28 E-value=28 Score=30.76 Aligned_cols=53 Identities=9% Similarity=0.116 Sum_probs=39.4
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeC-CCChhHHHHHHHHHHHhcCC
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNH-GIPSDLIGKLQAVGKEFFEL 95 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 95 (335)
.++|+-|||+..-..+..++|.+|+.++|.+.+.+- .++.+ +..+.+++|=.+
T Consensus 19 Gaei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 456777899843255678999999999999999998 77764 445666666443
No 29
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=35.00 E-value=23 Score=26.83 Aligned_cols=36 Identities=8% Similarity=0.026 Sum_probs=25.8
Q ss_pred eeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChh
Q 019857 45 TIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSD 80 (335)
Q Consensus 45 vIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~ 80 (335)
|||++.+........|.+.|+++|+.-+--.|.+.+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 778887653333678889999999998866554533
No 30
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=29.93 E-value=1e+02 Score=27.51 Aligned_cols=42 Identities=21% Similarity=0.198 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHHHcCeEEEEeCCCC----hhHHHHHHHHHHHhcC
Q 019857 53 QDRLVRSIAEASREWGIFQVTNHGIP----SDLIGKLQAVGKEFFE 94 (335)
Q Consensus 53 ~~~~~~~l~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 94 (335)
.+++.+++.+.++.-||+.=.+|||+ .+-++.+.+++++|++
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 46677888888888888766789976 4668899999999875
No 31
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=28.33 E-value=55 Score=18.22 Aligned_cols=19 Identities=26% Similarity=0.368 Sum_probs=16.3
Q ss_pred hHHHHHHHHHHHHHcCeEE
Q 019857 53 QDRLVRSIAEASREWGIFQ 71 (335)
Q Consensus 53 ~~~~~~~l~~A~~~~Gff~ 71 (335)
...+++.|.-.|.+-||||
T Consensus 8 Gs~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFY 26 (30)
T ss_dssp THHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHHhccCcccc
Confidence 4567888899999999998
No 32
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=27.92 E-value=17 Score=31.41 Aligned_cols=47 Identities=17% Similarity=0.177 Sum_probs=35.6
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCCCChhHHHHHHHHHHHhc
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFF 93 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 93 (335)
.+.|+-||++.+ + .++|.+++.++|++.+.+-.++. ++..+.++.|=
T Consensus 16 Ga~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~---~~~~~~~~~~G 62 (273)
T 1nx8_A 16 GAYIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDS---DTFRDIYSAYG 62 (273)
T ss_dssp SEEECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCH---HHHHHHHHTTS
T ss_pred eEEEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCH---HHHHHHHHHhC
Confidence 345677788876 3 89999999999999999988765 34555666653
No 33
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.95 E-value=26 Score=23.91 Aligned_cols=41 Identities=17% Similarity=0.119 Sum_probs=33.7
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhcCCChhHHHhhhC
Q 019857 153 PSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAG 193 (335)
Q Consensus 153 ~~f~~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~ 193 (335)
..-+..+++||..-.+-...-+..||..+||+.+.+.-.|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 34467888999888888888899999999999887776664
No 34
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=26.51 E-value=20 Score=30.18 Aligned_cols=34 Identities=12% Similarity=0.210 Sum_probs=27.9
Q ss_pred CceeeCCCCChHHHHHHHHHHHHHc-CeEEEEeCCC
Q 019857 43 IPTIDLDDPVQDRLVRSIAEASREW-GIFQVTNHGI 77 (335)
Q Consensus 43 iPvIDl~~~~~~~~~~~l~~A~~~~-Gff~l~nhgi 77 (335)
+|++++..... ++++++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 88999887665 7889999999864 6788999995
No 35
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=26.11 E-value=55 Score=20.51 Aligned_cols=24 Identities=8% Similarity=0.188 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhH
Q 019857 164 KYMREVVDKLFTYLSLGLGVEGGV 187 (335)
Q Consensus 164 ~~~~~l~~~ll~~l~~~Lgl~~~~ 187 (335)
+.-.+++..|.+++++.||.|+++
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688899999999999999754
No 36
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=24.89 E-value=50 Score=21.04 Aligned_cols=23 Identities=30% Similarity=0.144 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHhhcCCChhH
Q 019857 165 YMREVVDKLFTYLSLGLGVEGGV 187 (335)
Q Consensus 165 ~~~~l~~~ll~~l~~~Lgl~~~~ 187 (335)
.-.++...|.+++++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 34678889999999999998754
No 37
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=22.80 E-value=37 Score=29.49 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=29.1
Q ss_pred CCceeeCCC---------CChHHHHHHHHHHHHHcCeEEEEeCCC
Q 019857 42 EIPTIDLDD---------PVQDRLVRSIAEASREWGIFQVTNHGI 77 (335)
Q Consensus 42 ~iPvIDl~~---------~~~~~~~~~l~~A~~~~Gff~l~nhgi 77 (335)
.||++++.. ...+++++.+.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 699999641 125688999999999888899999996
No 38
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.91 E-value=66 Score=28.11 Aligned_cols=53 Identities=9% Similarity=0.046 Sum_probs=36.9
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHHHHcCeEEEEeCC-C-ChhHHHHHHHHHHHhcCC
Q 019857 40 APEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHG-I-PSDLIGKLQAVGKEFFEL 95 (335)
Q Consensus 40 ~~~iPvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nhg-i-~~~~~~~~~~~~~~fF~l 95 (335)
.+.|.=||++..-..+..++|.+++.++|++.+.+-. + +. ++..+.+++|=.+
T Consensus 28 GaeI~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~---~~~~~~a~~fG~l 82 (293)
T 3eat_X 28 GLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADA---ESLTRYCHDFGEV 82 (293)
T ss_dssp CEEEEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSH---HHHHHHHHHHSCB
T ss_pred ceEEECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCH---HHHHHHHHHhCCC
Confidence 3456667887522445688999999999999999876 5 43 4555667776443
No 39
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=20.39 E-value=98 Score=19.32 Aligned_cols=24 Identities=4% Similarity=-0.011 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhH
Q 019857 164 KYMREVVDKLFTYLSLGLGVEGGV 187 (335)
Q Consensus 164 ~~~~~l~~~ll~~l~~~Lgl~~~~ 187 (335)
+.-.+++..|.+++.+.||++++.
T Consensus 14 e~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 14 EQKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688899999999999998743
No 40
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=20.12 E-value=60 Score=27.52 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=27.9
Q ss_pred ceeeCCCCChHHHHHHHHHHHHHcCeEEEEeC-CCChhHHHHHHHH
Q 019857 44 PTIDLDDPVQDRLVRSIAEASREWGIFQVTNH-GIPSDLIGKLQAV 88 (335)
Q Consensus 44 PvIDl~~~~~~~~~~~l~~A~~~~Gff~l~nh-gi~~~~~~~~~~~ 88 (335)
-+|||+. ++.+....+.|.+.|.=.|+.- |.+.+.++.+.++
T Consensus 56 VvIDFT~---P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~ 98 (228)
T 1vm6_A 56 VVIDFSS---PEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLREL 98 (228)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHH
T ss_pred EEEECCC---HHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHH
Confidence 5999995 4556666677777787777653 6776655544443
Done!