Query 019861
Match_columns 334
No_of_seqs 308 out of 3254
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 08:12:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2x_A TCAB9; kijanose, tetron 99.9 1.8E-24 6.3E-29 205.6 15.5 203 95-331 50-268 (416)
2 4gek_A TRNA (CMO5U34)-methyltr 99.9 4.8E-21 1.7E-25 170.7 19.2 158 176-333 69-259 (261)
3 3dtn_A Putative methyltransfer 99.9 1.9E-20 6.6E-25 163.7 19.7 169 164-333 30-228 (234)
4 3hnr_A Probable methyltransfer 99.9 5.5E-21 1.9E-25 165.4 15.3 160 171-333 39-214 (220)
5 3dlc_A Putative S-adenosyl-L-m 99.8 8.5E-21 2.9E-25 163.6 13.7 166 164-333 31-216 (219)
6 3dh0_A SAM dependent methyltra 99.8 3.5E-20 1.2E-24 160.3 16.8 152 168-333 28-195 (219)
7 1vl5_A Unknown conserved prote 99.8 4.6E-20 1.6E-24 163.9 16.5 147 167-319 27-189 (260)
8 3bus_A REBM, methyltransferase 99.8 3E-19 1E-23 159.6 19.2 151 166-319 50-215 (273)
9 1xxl_A YCGJ protein; structura 99.8 2E-19 6.9E-24 158.0 16.7 146 168-319 12-173 (239)
10 2p7i_A Hypothetical protein; p 99.8 3.7E-20 1.3E-24 162.7 12.0 137 177-318 42-197 (250)
11 3e23_A Uncharacterized protein 99.8 5.2E-19 1.8E-23 152.1 17.3 152 165-333 33-204 (211)
12 2o57_A Putative sarcosine dime 99.8 6.3E-19 2.2E-23 159.6 18.5 149 165-319 66-233 (297)
13 3dli_A Methyltransferase; PSI- 99.8 3.9E-19 1.3E-23 156.1 16.5 147 165-321 28-185 (240)
14 3l8d_A Methyltransferase; stru 99.8 3.3E-19 1.1E-23 156.4 15.7 145 165-318 43-198 (242)
15 3ujc_A Phosphoethanolamine N-m 99.8 4.8E-19 1.7E-23 157.3 16.7 152 162-319 40-205 (266)
16 1nkv_A Hypothetical protein YJ 99.8 4.4E-19 1.5E-23 157.0 16.0 150 162-318 21-185 (256)
17 3kkz_A Uncharacterized protein 99.8 1.4E-18 4.8E-23 155.0 18.7 151 161-319 29-195 (267)
18 3f4k_A Putative methyltransfer 99.8 1.8E-18 6.3E-23 153.1 18.8 152 160-319 28-195 (257)
19 3mgg_A Methyltransferase; NYSG 99.8 9E-19 3.1E-23 156.9 16.7 153 167-319 27-197 (276)
20 3mcz_A O-methyltransferase; ad 99.8 2.3E-18 7.8E-23 159.9 19.1 163 168-333 169-351 (352)
21 3h2b_A SAM-dependent methyltra 99.8 2.6E-19 8.9E-24 153.0 11.7 140 178-330 42-194 (203)
22 3ccf_A Cyclopropane-fatty-acyl 99.8 5.1E-19 1.7E-23 159.0 14.0 145 168-318 48-208 (279)
23 2aot_A HMT, histamine N-methyl 99.8 1.7E-18 5.9E-23 156.6 17.6 137 176-317 51-218 (292)
24 3i9f_A Putative type 11 methyl 99.8 4E-19 1.4E-23 147.5 11.8 140 174-331 14-160 (170)
25 3g5l_A Putative S-adenosylmeth 99.8 1.7E-18 5.9E-23 153.1 16.6 151 167-318 34-214 (253)
26 3vc1_A Geranyl diphosphate 2-C 99.8 3.4E-18 1.2E-22 156.1 18.8 146 167-319 106-268 (312)
27 4htf_A S-adenosylmethionine-de 99.8 6.5E-19 2.2E-23 158.7 13.5 138 178-318 69-230 (285)
28 3ocj_A Putative exported prote 99.8 2.5E-18 8.7E-23 156.5 17.1 156 176-332 117-305 (305)
29 3jwh_A HEN1; methyltransferase 99.8 8E-19 2.7E-23 151.7 12.7 146 167-317 19-189 (217)
30 1kpg_A CFA synthase;, cyclopro 99.8 5.1E-18 1.7E-22 152.9 18.2 153 166-320 53-228 (287)
31 2a14_A Indolethylamine N-methy 99.8 4.6E-19 1.6E-23 158.1 10.9 147 174-332 52-261 (263)
32 3ou2_A SAM-dependent methyltra 99.8 3.3E-18 1.1E-22 147.4 15.1 152 175-329 44-214 (218)
33 3sm3_A SAM-dependent methyltra 99.8 4.3E-18 1.5E-22 148.3 15.9 138 177-318 30-205 (235)
34 1y8c_A S-adenosylmethionine-de 99.8 6.5E-18 2.2E-22 148.1 17.1 153 177-332 37-246 (246)
35 3jwg_A HEN1, methyltransferase 99.8 2.3E-18 8E-23 148.9 14.0 160 167-331 19-210 (219)
36 2p35_A Trans-aconitate 2-methy 99.8 3.6E-18 1.2E-22 151.3 15.4 146 168-315 24-185 (259)
37 3hem_A Cyclopropane-fatty-acyl 99.8 6E-18 2.1E-22 153.7 17.3 154 166-321 61-244 (302)
38 1p91_A Ribosomal RNA large sub 99.8 1.9E-18 6.6E-23 154.2 13.4 168 71-272 2-182 (269)
39 3bkw_A MLL3908 protein, S-aden 99.8 4.4E-18 1.5E-22 149.2 15.0 151 168-319 34-213 (243)
40 3gwz_A MMCR; methyltransferase 99.8 2E-17 6.9E-22 154.6 20.1 159 167-330 192-368 (369)
41 1xtp_A LMAJ004091AAA; SGPP, st 99.8 3E-18 1E-22 151.4 12.7 140 168-319 84-237 (254)
42 1vlm_A SAM-dependent methyltra 99.8 1.8E-17 6.3E-22 143.4 16.7 143 178-331 48-219 (219)
43 1x19_A CRTF-related protein; m 99.8 2.6E-17 8.9E-22 153.2 18.8 162 167-331 180-359 (359)
44 3gu3_A Methyltransferase; alph 99.8 2E-17 6.7E-22 149.1 17.2 147 173-320 18-190 (284)
45 3cc8_A Putative methyltransfer 99.8 1.6E-18 5.6E-23 150.3 9.8 146 168-319 24-184 (230)
46 3pfg_A N-methyltransferase; N, 99.8 4.6E-18 1.6E-22 151.2 12.9 161 167-332 42-250 (263)
47 3ege_A Putative methyltransfer 99.8 2.7E-18 9.2E-23 152.8 11.3 146 165-319 22-177 (261)
48 3thr_A Glycine N-methyltransfe 99.8 2.9E-17 1E-21 148.3 18.2 108 162-271 42-178 (293)
49 2r3s_A Uncharacterized protein 99.8 2.5E-17 8.6E-22 151.6 18.0 162 168-331 154-335 (335)
50 3i53_A O-methyltransferase; CO 99.8 2.3E-17 7.8E-22 151.9 17.6 153 171-330 163-331 (332)
51 3lcc_A Putative methyl chlorid 99.8 1.2E-17 4E-22 146.1 14.9 124 178-319 67-206 (235)
52 3e8s_A Putative SAM dependent 99.8 8.7E-18 3E-22 145.4 13.9 160 168-331 43-227 (227)
53 2yqz_A Hypothetical protein TT 99.8 2E-17 6.8E-22 146.7 15.9 141 174-317 36-193 (263)
54 2ex4_A Adrenal gland protein A 99.7 8.9E-18 3E-22 147.5 13.3 130 177-319 79-224 (241)
55 2fk8_A Methoxy mycolic acid sy 99.7 2.5E-17 8.5E-22 150.7 16.2 151 166-319 79-253 (318)
56 2xvm_A Tellurite resistance pr 99.7 2.5E-17 8.5E-22 139.8 14.6 145 169-331 24-199 (199)
57 2gs9_A Hypothetical protein TT 99.7 3.8E-17 1.3E-21 140.3 15.9 134 168-311 29-171 (211)
58 4fsd_A Arsenic methyltransfera 99.7 1.7E-17 5.8E-22 155.9 14.3 140 175-318 81-249 (383)
59 3bkx_A SAM-dependent methyltra 99.7 8.5E-17 2.9E-21 143.8 18.1 152 168-319 34-218 (275)
60 2i62_A Nicotinamide N-methyltr 99.7 1.1E-17 3.7E-22 148.6 11.9 148 174-333 53-263 (265)
61 1qzz_A RDMB, aclacinomycin-10- 99.7 6.9E-17 2.3E-21 151.1 17.9 162 167-332 172-357 (374)
62 1tw3_A COMT, carminomycin 4-O- 99.7 1E-16 3.5E-21 149.2 17.8 161 168-332 174-357 (360)
63 2g72_A Phenylethanolamine N-me 99.7 9E-18 3.1E-22 151.6 10.1 130 177-318 71-254 (289)
64 2ip2_A Probable phenazine-spec 99.7 9.8E-17 3.4E-21 147.7 17.0 159 166-330 157-333 (334)
65 1pjz_A Thiopurine S-methyltran 99.7 2.2E-17 7.4E-22 141.5 11.4 128 173-318 18-174 (203)
66 3d2l_A SAM-dependent methyltra 99.7 1.2E-16 4.3E-21 139.8 16.3 161 165-331 23-243 (243)
67 3bxo_A N,N-dimethyltransferase 99.7 2.6E-17 8.7E-22 143.9 11.6 160 167-331 32-239 (239)
68 3dp7_A SAM-dependent methyltra 99.7 1.1E-16 3.6E-21 149.4 16.4 152 177-330 179-354 (363)
69 4a6d_A Hydroxyindole O-methylt 99.7 3.2E-16 1.1E-20 145.6 19.1 162 168-332 170-347 (353)
70 3cgg_A SAM-dependent methyltra 99.7 2.9E-16 1E-20 132.4 16.9 129 177-331 46-195 (195)
71 1ve3_A Hypothetical protein PH 99.7 2.7E-16 9.3E-21 136.2 16.0 157 167-328 30-224 (227)
72 3lst_A CALO1 methyltransferase 99.7 1.3E-16 4.4E-21 147.9 13.7 156 168-330 175-347 (348)
73 3g2m_A PCZA361.24; SAM-depende 99.7 1.9E-16 6.6E-21 143.5 13.9 150 166-319 72-273 (299)
74 3g5t_A Trans-aconitate 3-methy 99.7 3.8E-16 1.3E-20 141.5 15.8 149 162-312 22-196 (299)
75 4hg2_A Methyltransferase type 99.7 4.9E-17 1.7E-21 144.3 9.6 106 162-272 26-139 (257)
76 3reo_A (ISO)eugenol O-methyltr 99.7 6.8E-16 2.3E-20 144.1 17.6 162 167-331 192-367 (368)
77 3g07_A 7SK snRNA methylphospha 99.7 1.8E-17 6.2E-22 150.0 6.7 137 177-318 46-267 (292)
78 2gb4_A Thiopurine S-methyltran 99.7 5E-16 1.7E-20 137.5 15.5 135 166-318 57-225 (252)
79 2vdw_A Vaccinia virus capping 99.7 3.5E-17 1.2E-21 148.7 7.2 142 177-319 48-245 (302)
80 1fp1_D Isoliquiritigenin 2'-O- 99.7 6.2E-16 2.1E-20 144.6 15.2 159 168-330 199-372 (372)
81 2kw5_A SLR1183 protein; struct 99.7 3.9E-17 1.3E-21 139.3 6.1 123 178-317 31-168 (202)
82 2qe6_A Uncharacterized protein 99.7 1.9E-15 6.6E-20 135.4 17.1 134 177-316 77-238 (274)
83 3p9c_A Caffeic acid O-methyltr 99.7 1.6E-15 5.4E-20 141.4 16.8 160 168-330 191-364 (364)
84 3m70_A Tellurite resistance pr 99.7 9.5E-16 3.3E-20 137.9 13.8 137 177-331 120-286 (286)
85 1wzn_A SAM-dependent methyltra 99.7 3.6E-15 1.2E-19 131.5 17.1 158 171-332 35-251 (252)
86 1ri5_A MRNA capping enzyme; me 99.7 7.5E-16 2.6E-20 139.0 12.9 136 176-318 63-248 (298)
87 3grz_A L11 mtase, ribosomal pr 99.7 1.3E-15 4.5E-20 130.2 13.7 125 177-331 60-196 (205)
88 3ggd_A SAM-dependent methyltra 99.6 1.7E-15 5.8E-20 133.1 14.3 134 176-317 55-216 (245)
89 2p8j_A S-adenosylmethionine-de 99.6 3.7E-16 1.3E-20 133.7 9.8 139 176-316 22-179 (209)
90 2zfu_A Nucleomethylin, cerebra 99.6 4.1E-16 1.4E-20 134.3 10.0 126 176-332 66-192 (215)
91 3ofk_A Nodulation protein S; N 99.6 7.9E-16 2.7E-20 132.5 11.0 103 167-271 41-157 (216)
92 3e05_A Precorrin-6Y C5,15-meth 99.6 1.5E-14 5E-19 123.6 18.7 120 164-312 27-160 (204)
93 1fp2_A Isoflavone O-methyltran 99.6 2.2E-15 7.4E-20 139.9 14.6 149 177-330 188-352 (352)
94 4df3_A Fibrillarin-like rRNA/T 99.6 5.2E-15 1.8E-19 128.6 15.7 139 172-329 72-230 (233)
95 3orh_A Guanidinoacetate N-meth 99.6 1.4E-16 4.7E-21 139.8 5.4 91 176-267 59-169 (236)
96 1fbn_A MJ fibrillarin homologu 99.6 1.4E-14 4.9E-19 126.2 17.2 140 170-332 67-229 (230)
97 2nxc_A L11 mtase, ribosomal pr 99.6 1.2E-14 4.2E-19 128.7 15.4 124 176-330 119-254 (254)
98 3htx_A HEN1; HEN1, small RNA m 99.6 7E-15 2.4E-19 146.2 15.0 146 166-316 710-894 (950)
99 2pxx_A Uncharacterized protein 99.6 1.3E-14 4.3E-19 124.4 13.8 106 163-271 30-162 (215)
100 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.1E-14 3.8E-19 121.2 12.8 120 167-316 15-149 (178)
101 1zg3_A Isoflavanone 4'-O-methy 99.6 8.4E-15 2.9E-19 136.2 13.2 151 177-330 193-358 (358)
102 1dus_A MJ0882; hypothetical pr 99.6 2.2E-14 7.6E-19 120.6 14.1 138 164-330 39-193 (194)
103 1l3i_A Precorrin-6Y methyltran 99.6 2E-14 6.9E-19 120.7 13.8 121 163-314 19-154 (192)
104 2avn_A Ubiquinone/menaquinone 99.6 7.2E-15 2.5E-19 130.4 11.5 145 167-318 46-211 (260)
105 3fzg_A 16S rRNA methylase; met 99.6 5.9E-15 2E-19 123.0 9.2 153 160-331 34-198 (200)
106 3njr_A Precorrin-6Y methylase; 99.6 1.3E-13 4.5E-18 118.0 17.4 119 166-317 44-177 (204)
107 2ld4_A Anamorsin; methyltransf 99.6 1.7E-14 5.7E-19 120.3 10.7 107 173-312 8-128 (176)
108 2b3t_A Protein methyltransfera 99.6 5.1E-14 1.7E-18 126.2 14.5 139 164-330 97-275 (276)
109 1yb2_A Hypothetical protein TA 99.6 2.5E-14 8.6E-19 128.1 12.5 121 167-318 100-235 (275)
110 3iv6_A Putative Zn-dependent a 99.6 3.2E-14 1.1E-18 126.0 12.8 103 166-271 34-151 (261)
111 3mq2_A 16S rRNA methyltransfer 99.5 9.9E-15 3.4E-19 125.9 8.8 136 175-319 25-183 (218)
112 1zx0_A Guanidinoacetate N-meth 99.5 7.8E-15 2.7E-19 128.3 8.2 94 176-270 59-172 (236)
113 1nt2_A Fibrillarin-like PRE-rR 99.5 1.4E-13 4.9E-18 118.3 15.7 133 173-330 53-209 (210)
114 3q87_B N6 adenine specific DNA 99.5 9.4E-14 3.2E-18 115.3 13.9 112 176-318 22-147 (170)
115 3evz_A Methyltransferase; NYSG 99.5 1.7E-13 5.8E-18 119.1 16.0 130 176-331 54-220 (230)
116 3m33_A Uncharacterized protein 99.5 2.5E-14 8.4E-19 124.3 10.2 108 177-319 48-166 (226)
117 2yxd_A Probable cobalt-precorr 99.5 3.4E-13 1.2E-17 112.3 16.6 120 163-316 21-153 (183)
118 3mb5_A SAM-dependent methyltra 99.5 6.2E-14 2.1E-18 123.8 12.5 123 163-316 79-218 (255)
119 3bgv_A MRNA CAP guanine-N7 met 99.5 1.9E-14 6.4E-19 131.3 9.2 136 177-319 34-231 (313)
120 3mti_A RRNA methylase; SAM-dep 99.5 9.7E-14 3.3E-18 116.5 12.8 92 177-270 22-137 (185)
121 3fpf_A Mtnas, putative unchara 99.5 6.5E-14 2.2E-18 125.4 12.3 123 144-269 78-223 (298)
122 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.8E-13 6E-18 120.9 14.9 123 163-316 82-220 (258)
123 3giw_A Protein of unknown func 99.5 3E-13 1E-17 119.8 14.8 134 178-316 79-243 (277)
124 1xdz_A Methyltransferase GIDB; 99.5 1.9E-13 6.6E-18 119.8 13.4 128 176-331 69-219 (240)
125 4dzr_A Protein-(glutamine-N5) 99.5 3.6E-14 1.2E-18 121.4 8.2 139 167-331 19-205 (215)
126 3p2e_A 16S rRNA methylase; met 99.5 1.4E-14 4.7E-19 126.0 5.3 138 177-320 24-185 (225)
127 3p9n_A Possible methyltransfer 99.5 1.8E-13 6.1E-18 115.4 11.6 96 176-272 43-157 (189)
128 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.9E-13 1E-17 116.4 12.8 94 177-270 41-158 (214)
129 3opn_A Putative hemolysin; str 99.5 1E-13 3.6E-18 121.0 9.3 130 176-318 36-182 (232)
130 3bzb_A Uncharacterized protein 99.5 5.4E-13 1.8E-17 119.8 13.9 132 165-318 67-235 (281)
131 1o54_A SAM-dependent O-methylt 99.5 5.1E-13 1.7E-17 119.6 13.7 122 164-316 99-235 (277)
132 2ipx_A RRNA 2'-O-methyltransfe 99.5 4.9E-13 1.7E-17 116.6 13.1 140 172-331 72-232 (233)
133 3lbf_A Protein-L-isoaspartate 99.5 3.5E-13 1.2E-17 115.4 11.3 97 166-270 66-176 (210)
134 3eey_A Putative rRNA methylase 99.5 4.1E-13 1.4E-17 113.8 11.4 96 176-271 21-142 (197)
135 3lpm_A Putative methyltransfer 99.4 1.5E-12 5.2E-17 115.4 15.2 136 168-331 39-219 (259)
136 2fca_A TRNA (guanine-N(7)-)-me 99.4 6.1E-13 2.1E-17 114.6 12.2 94 177-270 38-155 (213)
137 3hp7_A Hemolysin, putative; st 99.4 1.1E-13 3.9E-18 124.0 7.9 133 176-318 84-230 (291)
138 3id6_C Fibrillarin-like rRNA/T 99.4 2.5E-12 8.5E-17 111.9 16.0 138 174-331 73-231 (232)
139 3bwc_A Spermidine synthase; SA 99.4 7.8E-13 2.7E-17 120.1 13.4 132 177-330 95-257 (304)
140 1g8a_A Fibrillarin-like PRE-rR 99.4 3.2E-12 1.1E-16 110.8 16.6 138 172-330 68-226 (227)
141 1jsx_A Glucose-inhibited divis 99.4 3.8E-13 1.3E-17 114.8 10.5 122 177-331 65-205 (207)
142 2pjd_A Ribosomal RNA small sub 99.4 3.6E-13 1.2E-17 124.4 10.8 107 165-271 184-306 (343)
143 4dcm_A Ribosomal RNA large sub 99.4 1.9E-12 6.5E-17 120.9 14.9 106 165-270 210-336 (375)
144 3dxy_A TRNA (guanine-N(7)-)-me 99.4 6E-13 2.1E-17 115.0 9.9 94 177-270 34-152 (218)
145 3kr9_A SAM-dependent methyltra 99.4 3.8E-12 1.3E-16 109.9 14.3 133 166-330 6-157 (225)
146 3g89_A Ribosomal RNA small sub 99.4 2.7E-12 9.2E-17 113.2 13.6 116 175-318 78-210 (249)
147 2b25_A Hypothetical protein; s 99.4 6.5E-13 2.2E-17 122.3 9.8 102 165-271 93-222 (336)
148 3lec_A NADB-rossmann superfami 99.4 6.4E-12 2.2E-16 108.7 14.7 133 166-330 12-163 (230)
149 2yxe_A Protein-L-isoaspartate 99.4 1.6E-12 5.4E-17 111.7 10.8 99 167-271 67-180 (215)
150 1vbf_A 231AA long hypothetical 99.4 2.2E-12 7.4E-17 112.1 11.8 98 166-271 59-168 (231)
151 1ws6_A Methyltransferase; stru 99.4 9.4E-13 3.2E-17 108.5 8.9 93 177-273 41-152 (171)
152 2frn_A Hypothetical protein PH 99.4 6.8E-12 2.3E-16 112.4 14.9 122 168-316 118-253 (278)
153 1i9g_A Hypothetical protein RV 99.4 2.9E-12 1E-16 114.6 12.3 104 163-271 85-206 (280)
154 3q7e_A Protein arginine N-meth 99.4 1.4E-12 4.9E-17 120.7 10.5 93 175-269 64-174 (349)
155 3dmg_A Probable ribosomal RNA 99.4 3.3E-12 1.1E-16 119.4 13.0 93 176-270 232-342 (381)
156 2fhp_A Methylase, putative; al 99.4 3.2E-12 1.1E-16 107.0 10.9 107 164-272 30-158 (187)
157 2fyt_A Protein arginine N-meth 99.4 2.8E-12 9.5E-17 118.3 11.3 97 167-265 54-168 (340)
158 1dl5_A Protein-L-isoaspartate 99.4 2.9E-12 9.8E-17 117.1 11.0 100 166-271 64-178 (317)
159 2esr_A Methyltransferase; stru 99.4 1.9E-12 6.6E-17 107.6 8.9 104 167-272 20-142 (177)
160 1ej0_A FTSJ; methyltransferase 99.3 2.8E-12 9.5E-17 105.9 9.6 96 175-271 20-139 (180)
161 3ckk_A TRNA (guanine-N(7)-)-me 99.3 2.8E-12 9.7E-17 112.1 9.7 94 177-270 46-170 (235)
162 2fpo_A Methylase YHHF; structu 99.3 4.5E-12 1.5E-16 108.1 10.6 93 177-271 54-163 (202)
163 1af7_A Chemotaxis receptor met 99.3 1.9E-12 6.5E-17 115.5 8.5 90 177-266 105-250 (274)
164 1jg1_A PIMT;, protein-L-isoasp 99.3 3.8E-12 1.3E-16 111.0 10.2 99 167-272 81-193 (235)
165 2ift_A Putative methylase HI07 99.3 2.5E-12 8.4E-17 109.7 8.7 93 177-271 53-166 (201)
166 3u81_A Catechol O-methyltransf 99.3 1.7E-12 5.7E-17 112.3 7.7 103 168-271 49-173 (221)
167 3gnl_A Uncharacterized protein 99.3 1.2E-11 4E-16 108.0 12.4 134 166-331 12-164 (244)
168 3tfw_A Putative O-methyltransf 99.3 2.2E-11 7.7E-16 107.2 14.4 95 174-271 60-173 (248)
169 2ozv_A Hypothetical protein AT 99.3 3.6E-11 1.2E-15 106.6 15.7 102 168-269 27-171 (260)
170 3uwp_A Histone-lysine N-methyl 99.3 2.3E-12 8E-17 119.8 8.0 108 164-272 160-292 (438)
171 1u2z_A Histone-lysine N-methyl 99.3 5.9E-12 2E-16 118.9 10.9 107 164-271 229-362 (433)
172 3ntv_A MW1564 protein; rossman 99.3 1.3E-11 4.6E-16 107.5 12.4 103 166-271 60-179 (232)
173 3r0q_C Probable protein argini 99.3 7.9E-12 2.7E-16 116.9 11.2 101 167-270 53-171 (376)
174 2h00_A Methyltransferase 10 do 99.3 1.4E-12 4.9E-17 115.1 5.3 131 177-317 65-235 (254)
175 3duw_A OMT, O-methyltransferas 99.3 4.1E-11 1.4E-15 103.4 13.9 102 167-271 48-170 (223)
176 1o9g_A RRNA methyltransferase; 99.3 1.3E-11 4.4E-16 108.7 10.7 103 168-270 42-216 (250)
177 1ixk_A Methyltransferase; open 99.3 1.9E-11 6.4E-16 111.6 11.8 104 168-271 109-249 (315)
178 3dr5_A Putative O-methyltransf 99.3 2.1E-11 7.3E-16 105.5 11.5 103 166-271 45-166 (221)
179 2gpy_A O-methyltransferase; st 99.3 2.5E-11 8.5E-16 105.6 11.9 105 164-271 41-163 (233)
180 2yvl_A TRMI protein, hypotheti 99.3 3E-11 1E-15 105.8 12.5 98 166-270 80-192 (248)
181 1g6q_1 HnRNP arginine N-methyl 99.3 1.1E-11 3.7E-16 113.8 10.1 89 176-266 37-143 (328)
182 4azs_A Methyltransferase WBDD; 99.3 4.4E-12 1.5E-16 124.8 7.9 92 178-271 67-176 (569)
183 3gdh_A Trimethylguanosine synt 99.3 4.1E-13 1.4E-17 117.5 -0.1 129 177-321 78-221 (241)
184 3lcv_B Sisomicin-gentamicin re 99.3 1.6E-11 5.5E-16 107.0 9.9 150 161-330 118-281 (281)
185 2y1w_A Histone-arginine methyl 99.3 1.3E-11 4.4E-16 114.2 9.9 101 167-270 40-157 (348)
186 1i1n_A Protein-L-isoaspartate 99.3 2.5E-11 8.5E-16 105.0 10.9 91 175-271 75-185 (226)
187 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.8E-11 6.2E-16 107.6 9.8 89 177-270 49-175 (246)
188 2igt_A SAM dependent methyltra 99.2 5.6E-11 1.9E-15 109.1 12.3 102 168-271 143-275 (332)
189 3c3p_A Methyltransferase; NP_9 99.2 2.3E-11 7.9E-16 104.1 9.2 91 177-271 56-163 (210)
190 3adn_A Spermidine synthase; am 99.2 9.6E-11 3.3E-15 105.7 13.6 94 177-270 83-200 (294)
191 1r18_A Protein-L-isoaspartate( 99.2 1.9E-11 6.4E-16 106.0 8.7 90 175-270 82-196 (227)
192 2pbf_A Protein-L-isoaspartate 99.2 3E-11 1E-15 104.6 9.8 90 175-270 78-195 (227)
193 3gjy_A Spermidine synthase; AP 99.2 1.6E-10 5.6E-15 104.6 15.0 92 179-270 91-202 (317)
194 3tr6_A O-methyltransferase; ce 99.2 2.5E-11 8.7E-16 104.8 9.2 93 176-271 63-177 (225)
195 3r3h_A O-methyltransferase, SA 99.2 7.9E-12 2.7E-16 109.7 5.4 96 175-273 58-175 (242)
196 2plw_A Ribosomal RNA methyltra 99.2 1.9E-11 6.3E-16 103.7 7.3 95 176-270 21-156 (201)
197 1iy9_A Spermidine synthase; ro 99.2 1.4E-10 4.6E-15 103.8 13.0 131 177-330 75-235 (275)
198 1nv8_A HEMK protein; class I a 99.2 6.3E-11 2.1E-15 106.5 10.7 104 164-269 110-250 (284)
199 1inl_A Spermidine synthase; be 99.2 1.1E-10 3.7E-15 105.6 12.1 92 177-269 90-206 (296)
200 1uir_A Polyamine aminopropyltr 99.2 1.8E-10 6.1E-15 105.0 13.5 94 177-270 77-197 (314)
201 3tm4_A TRNA (guanine N2-)-meth 99.2 4.6E-10 1.6E-14 104.7 16.2 123 162-316 203-348 (373)
202 1sui_A Caffeoyl-COA O-methyltr 99.2 6.2E-11 2.1E-15 104.3 9.2 93 176-271 78-193 (247)
203 3tma_A Methyltransferase; thum 99.2 1.8E-10 6.3E-15 106.6 12.7 111 160-270 186-319 (354)
204 2hnk_A SAM-dependent O-methylt 99.2 4E-11 1.4E-15 104.8 7.7 102 167-271 50-184 (239)
205 2pt6_A Spermidine synthase; tr 99.2 2.1E-10 7.2E-15 104.8 12.3 93 177-270 116-232 (321)
206 3a27_A TYW2, uncharacterized p 99.1 1.8E-10 6.2E-15 102.8 11.1 92 176-271 118-222 (272)
207 2yxl_A PH0851 protein, 450AA l 99.1 3.2E-10 1.1E-14 108.4 13.6 105 167-271 249-392 (450)
208 3cbg_A O-methyltransferase; cy 99.1 6.1E-11 2.1E-15 103.3 7.8 93 176-271 71-185 (232)
209 2nyu_A Putative ribosomal RNA 99.1 2E-11 6.8E-16 103.0 4.5 96 175-271 20-148 (196)
210 3b3j_A Histone-arginine methyl 99.1 7.9E-11 2.7E-15 113.3 8.8 100 167-268 148-263 (480)
211 2f8l_A Hypothetical protein LM 99.1 4.9E-10 1.7E-14 103.4 13.8 114 158-271 107-259 (344)
212 3frh_A 16S rRNA methylase; met 99.1 6.9E-10 2.4E-14 95.8 13.5 144 165-331 96-252 (253)
213 3ajd_A Putative methyltransfer 99.1 1.7E-10 5.7E-15 103.1 9.6 103 170-272 76-215 (274)
214 2i7c_A Spermidine synthase; tr 99.1 4E-10 1.4E-14 101.2 11.6 94 177-270 78-194 (283)
215 4hc4_A Protein arginine N-meth 99.1 1.6E-10 5.6E-15 107.3 9.3 88 176-266 82-187 (376)
216 2avd_A Catechol-O-methyltransf 99.1 1.3E-10 4.4E-15 100.6 8.0 101 168-271 60-182 (229)
217 1mjf_A Spermidine synthase; sp 99.1 4.8E-10 1.6E-14 100.5 11.9 91 177-270 75-195 (281)
218 2bm8_A Cephalosporin hydroxyla 99.1 7.7E-11 2.6E-15 103.0 6.5 90 177-269 81-188 (236)
219 1sqg_A SUN protein, FMU protei 99.1 4.3E-10 1.5E-14 106.9 12.1 106 166-271 235-377 (429)
220 2b2c_A Spermidine synthase; be 99.1 4.9E-10 1.7E-14 101.9 11.8 91 177-268 108-222 (314)
221 3c3y_A Pfomt, O-methyltransfer 99.1 3.8E-10 1.3E-14 98.6 10.5 92 176-270 69-183 (237)
222 3dou_A Ribosomal RNA large sub 99.1 2E-10 6.7E-15 97.1 8.3 95 175-271 23-142 (191)
223 1ne2_A Hypothetical protein TA 99.1 1E-09 3.5E-14 93.0 12.8 82 175-258 49-139 (200)
224 2oxt_A Nucleoside-2'-O-methylt 99.1 5.7E-11 2E-15 105.5 5.1 91 175-270 72-187 (265)
225 3k6r_A Putative transferase PH 99.1 1.6E-09 5.4E-14 96.6 14.3 120 168-314 118-251 (278)
226 2wa2_A Non-structural protein 99.1 4.6E-11 1.6E-15 106.7 4.3 91 175-270 80-195 (276)
227 2cmg_A Spermidine synthase; tr 99.1 4.4E-10 1.5E-14 99.7 10.6 86 177-270 72-173 (262)
228 1wy7_A Hypothetical protein PH 99.1 2.2E-09 7.4E-14 91.3 14.5 112 175-316 47-171 (207)
229 1zq9_A Probable dimethyladenos 99.1 9.2E-11 3.1E-15 105.4 5.7 100 164-265 15-144 (285)
230 1xj5_A Spermidine synthase 1; 99.1 4.7E-10 1.6E-14 102.9 10.0 94 177-270 120-237 (334)
231 3sso_A Methyltransferase; macr 99.1 1.1E-10 3.9E-15 108.1 5.8 105 164-271 204-327 (419)
232 2qm3_A Predicted methyltransfe 99.1 3.3E-09 1.1E-13 98.9 15.6 92 176-269 171-279 (373)
233 2o07_A Spermidine synthase; st 99.0 3.8E-10 1.3E-14 102.3 8.4 94 177-270 95-211 (304)
234 3m6w_A RRNA methylase; rRNA me 99.0 5.9E-10 2E-14 106.3 9.1 104 168-271 92-232 (464)
235 3b5i_A S-adenosyl-L-methionine 99.0 5E-09 1.7E-13 97.1 15.0 140 178-317 53-295 (374)
236 2ih2_A Modification methylase 99.0 2.6E-09 8.9E-14 101.0 11.8 114 157-271 19-167 (421)
237 4dmg_A Putative uncharacterize 99.0 2.4E-09 8.2E-14 100.3 11.0 100 167-271 206-329 (393)
238 3m4x_A NOL1/NOP2/SUN family pr 99.0 8.9E-10 3E-14 104.9 8.0 104 168-271 96-237 (456)
239 2frx_A Hypothetical protein YE 98.9 4.6E-09 1.6E-13 100.8 12.1 103 170-272 108-250 (479)
240 2p41_A Type II methyltransfera 98.9 3.5E-10 1.2E-14 102.5 3.6 93 176-271 81-194 (305)
241 2b78_A Hypothetical protein SM 98.9 3.9E-09 1.3E-13 98.8 9.9 95 176-271 211-334 (385)
242 1qam_A ERMC' methyltransferase 98.9 9.4E-10 3.2E-14 96.6 5.3 100 163-264 16-142 (244)
243 2as0_A Hypothetical protein PH 98.9 3.7E-09 1.3E-13 99.3 8.8 94 177-271 217-338 (396)
244 3c0k_A UPF0064 protein YCCW; P 98.9 1.1E-08 3.7E-13 96.1 11.7 94 177-271 220-342 (396)
245 2okc_A Type I restriction enzy 98.9 7.6E-09 2.6E-13 98.7 10.5 131 140-270 129-309 (445)
246 1wxx_A TT1595, hypothetical pr 98.9 2.7E-09 9.2E-14 99.8 7.1 93 177-271 209-328 (382)
247 2xyq_A Putative 2'-O-methyl tr 98.9 1.5E-09 5.2E-14 97.3 4.9 116 172-318 58-195 (290)
248 2efj_A 3,7-dimethylxanthine me 98.9 1.5E-08 5.1E-13 94.0 11.7 140 178-317 53-289 (384)
249 3v97_A Ribosomal RNA large sub 98.8 7.3E-09 2.5E-13 104.0 9.5 93 177-270 539-659 (703)
250 1uwv_A 23S rRNA (uracil-5-)-me 98.8 5.1E-08 1.8E-12 92.6 13.0 98 165-268 274-389 (433)
251 1m6e_X S-adenosyl-L-methionnin 98.8 2.2E-08 7.4E-13 92.2 9.6 139 178-316 52-276 (359)
252 1yub_A Ermam, rRNA methyltrans 98.8 4.7E-11 1.6E-15 104.9 -7.9 101 166-269 18-146 (245)
253 2h1r_A Dimethyladenosine trans 98.8 7.4E-09 2.5E-13 93.6 6.1 96 164-262 29-153 (299)
254 2yx1_A Hypothetical protein MJ 98.7 7E-08 2.4E-12 88.6 12.1 87 177-271 195-294 (336)
255 2jjq_A Uncharacterized RNA met 98.7 1.3E-07 4.5E-12 89.4 12.3 88 176-268 289-387 (425)
256 3gru_A Dimethyladenosine trans 98.6 7.7E-08 2.6E-12 86.5 8.1 75 163-239 36-122 (295)
257 2qfm_A Spermine synthase; sper 98.6 1.4E-07 4.9E-12 86.4 9.9 94 177-271 188-317 (364)
258 3k0b_A Predicted N6-adenine-sp 98.6 1.9E-07 6.6E-12 87.4 10.4 110 161-271 185-353 (393)
259 3ldu_A Putative methylase; str 98.6 1.7E-07 5.7E-12 87.6 9.8 110 162-271 180-347 (385)
260 3ldg_A Putative uncharacterize 98.6 4E-07 1.4E-11 84.9 11.6 109 162-271 179-346 (384)
261 2ar0_A M.ecoki, type I restric 98.5 3.3E-07 1.1E-11 89.3 11.1 115 157-271 149-315 (541)
262 3bt7_A TRNA (uracil-5-)-methyl 98.5 2.6E-07 8.8E-12 85.9 8.7 98 164-270 201-328 (369)
263 3khk_A Type I restriction-modi 98.5 7.7E-07 2.6E-11 86.7 12.0 132 139-271 202-398 (544)
264 2b9e_A NOL1/NOP2/SUN domain fa 98.5 1.3E-06 4.5E-11 79.1 12.0 101 170-271 95-237 (309)
265 3fut_A Dimethyladenosine trans 98.4 4.5E-07 1.5E-11 80.5 7.8 58 163-223 33-90 (271)
266 2dul_A N(2),N(2)-dimethylguano 98.4 5.4E-07 1.8E-11 83.9 8.3 88 177-268 47-164 (378)
267 3o4f_A Spermidine synthase; am 98.4 5.1E-06 1.7E-10 74.1 13.2 95 177-271 83-201 (294)
268 3lkd_A Type I restriction-modi 98.4 4.7E-06 1.6E-10 81.0 13.8 132 140-271 175-361 (542)
269 3tqs_A Ribosomal RNA small sub 98.3 9E-07 3.1E-11 77.9 6.8 59 163-223 15-73 (255)
270 3axs_A Probable N(2),N(2)-dime 98.3 1.8E-06 6.3E-11 80.4 9.3 88 177-268 52-158 (392)
271 3evf_A RNA-directed RNA polyme 98.3 8.3E-07 2.8E-11 77.8 6.3 105 164-270 62-186 (277)
272 2qy6_A UPF0209 protein YFCK; s 98.3 2.8E-06 9.4E-11 74.8 9.3 125 177-331 60-247 (257)
273 2r6z_A UPF0341 protein in RSP 98.3 1.2E-06 4.2E-11 77.2 6.7 68 174-243 80-173 (258)
274 3v97_A Ribosomal RNA large sub 98.3 3.3E-06 1.1E-10 84.7 10.5 110 162-271 175-350 (703)
275 3uzu_A Ribosomal RNA small sub 98.2 1.5E-06 5.1E-11 77.5 6.4 58 164-221 29-88 (279)
276 1m6y_A S-adenosyl-methyltransf 98.2 2.7E-06 9.2E-11 76.6 8.0 58 166-223 15-72 (301)
277 3s1s_A Restriction endonucleas 98.2 1.2E-05 4.1E-10 80.4 12.5 115 157-271 295-468 (878)
278 3gcz_A Polyprotein; flavivirus 98.1 1.7E-06 5.7E-11 76.0 4.0 105 164-270 78-203 (282)
279 3ftd_A Dimethyladenosine trans 98.0 3.3E-06 1.1E-10 74.0 4.7 56 164-220 18-73 (249)
280 4gqb_A Protein arginine N-meth 98.0 1.5E-05 5.1E-10 78.4 9.6 85 178-265 358-464 (637)
281 1qyr_A KSGA, high level kasuga 98.0 4.9E-06 1.7E-10 73.0 5.1 56 165-222 9-64 (252)
282 3cvo_A Methyltransferase-like 98.0 5.4E-05 1.8E-09 63.8 10.8 83 178-268 31-154 (202)
283 3ua3_A Protein arginine N-meth 97.9 3.4E-05 1.2E-09 76.1 9.2 88 178-265 410-531 (745)
284 2vz8_A Fatty acid synthase; tr 97.9 2E-06 6.9E-11 97.0 0.1 137 177-318 1240-1393(2512)
285 2oyr_A UPF0341 protein YHIQ; a 97.9 1.8E-05 6.2E-10 69.5 6.2 91 168-262 77-194 (258)
286 2jny_A Uncharacterized BCR; st 97.8 7.2E-06 2.5E-10 55.9 2.3 44 69-121 8-51 (67)
287 2jr6_A UPF0434 protein NMA0874 97.8 7.5E-06 2.6E-10 56.1 2.4 44 69-121 6-49 (68)
288 3eld_A Methyltransferase; flav 97.8 3.2E-05 1.1E-09 68.3 6.6 105 164-270 69-193 (300)
289 2js4_A UPF0434 protein BB2007; 97.8 7.7E-06 2.6E-10 56.3 1.9 44 69-121 6-49 (70)
290 2pk7_A Uncharacterized protein 97.8 8.3E-06 2.9E-10 56.0 1.9 44 69-121 6-49 (69)
291 3ufb_A Type I restriction-modi 97.8 0.00014 4.9E-09 70.5 11.4 131 140-270 176-364 (530)
292 2hf1_A Tetraacyldisaccharide-1 97.8 7.1E-06 2.4E-10 56.2 1.4 44 69-121 6-49 (68)
293 3c6k_A Spermine synthase; sper 97.7 9E-05 3.1E-09 68.2 8.7 93 177-270 205-333 (381)
294 2zig_A TTHA0409, putative modi 97.7 7.5E-05 2.6E-09 67.0 7.8 60 161-223 220-279 (297)
295 4fzv_A Putative methyltransfer 97.6 0.00012 4.1E-09 67.4 7.9 106 169-274 140-290 (359)
296 4auk_A Ribosomal RNA large sub 97.6 0.00046 1.6E-08 63.3 11.2 79 176-261 210-296 (375)
297 2k4m_A TR8_protein, UPF0146 pr 97.6 7.2E-05 2.5E-09 59.1 4.8 83 178-272 36-125 (153)
298 3ll7_A Putative methyltransfer 97.5 0.00016 5.5E-09 67.6 7.6 44 178-223 94-137 (410)
299 2wk1_A NOVP; transferase, O-me 97.5 0.00021 7.2E-09 63.4 7.6 114 176-315 105-267 (282)
300 2kpi_A Uncharacterized protein 97.5 4.4E-05 1.5E-09 50.2 2.1 43 68-121 7-51 (56)
301 2px2_A Genome polyprotein [con 97.4 0.00018 6E-09 62.3 6.0 103 166-270 63-185 (269)
302 1wg8_A Predicted S-adenosylmet 97.4 0.00028 9.4E-09 62.2 7.3 64 167-239 12-75 (285)
303 3lkz_A Non-structural protein 97.4 0.00027 9.1E-09 62.3 6.5 106 164-271 82-207 (321)
304 1g60_A Adenine-specific methyl 97.1 0.0012 4.2E-08 57.8 8.2 62 159-223 195-256 (260)
305 2k5r_A Uncharacterized protein 97.1 0.00021 7.1E-09 52.2 2.0 52 69-120 6-75 (97)
306 1rjd_A PPM1P, carboxy methyl t 97.1 0.0048 1.6E-07 56.1 11.5 134 177-313 97-281 (334)
307 3p8z_A Mtase, non-structural p 97.0 0.00092 3.2E-08 57.0 6.1 105 165-272 67-190 (267)
308 3vyw_A MNMC2; tRNA wobble urid 96.9 0.011 3.9E-07 52.7 12.5 74 227-331 182-260 (308)
309 2uyo_A Hypothetical protein ML 96.3 0.031 1.1E-06 50.2 11.2 134 179-315 104-274 (310)
310 3tka_A Ribosomal RNA small sub 96.1 0.0073 2.5E-07 54.5 6.0 53 166-218 46-99 (347)
311 1i4w_A Mitochondrial replicati 96.0 0.011 3.7E-07 54.1 6.7 58 164-221 39-102 (353)
312 1pft_A TFIIB, PFTFIIBN; N-term 95.6 0.0062 2.1E-07 38.8 2.3 33 70-111 4-37 (50)
313 3r24_A NSP16, 2'-O-methyl tran 95.5 0.0065 2.2E-07 53.5 2.9 95 175-272 107-221 (344)
314 1kol_A Formaldehyde dehydrogen 95.0 0.061 2.1E-06 49.8 8.2 96 173-268 181-300 (398)
315 1eg2_A Modification methylase 94.9 0.068 2.3E-06 48.1 7.7 62 161-225 227-291 (319)
316 1f8f_A Benzyl alcohol dehydrog 94.9 0.071 2.4E-06 48.8 8.0 93 171-269 184-290 (371)
317 1boo_A Protein (N-4 cytosine-s 94.8 0.055 1.9E-06 48.8 6.8 60 161-223 237-296 (323)
318 2py6_A Methyltransferase FKBM; 94.6 0.075 2.6E-06 49.6 7.4 49 175-223 224-274 (409)
319 3iei_A Leucine carboxyl methyl 94.5 1.2 4E-05 40.2 14.9 136 178-319 91-280 (334)
320 4ej6_A Putative zinc-binding d 94.5 0.33 1.1E-05 44.4 11.5 92 172-269 177-285 (370)
321 3qv2_A 5-cytosine DNA methyltr 93.9 1.1 3.6E-05 40.4 13.3 119 178-317 10-157 (327)
322 1pqw_A Polyketide synthase; ro 93.8 0.12 4.2E-06 42.5 6.6 88 172-269 33-138 (198)
323 1pl8_A Human sorbitol dehydrog 93.8 0.23 7.9E-06 45.1 8.9 91 173-269 167-274 (356)
324 3s2e_A Zinc-containing alcohol 93.4 0.24 8.3E-06 44.6 8.2 90 172-268 161-263 (340)
325 1v3u_A Leukotriene B4 12- hydr 93.3 0.26 8.9E-06 44.2 8.4 88 171-268 139-244 (333)
326 1vq8_Z 50S ribosomal protein L 93.2 0.024 8.3E-07 40.1 0.9 32 70-110 26-57 (83)
327 2dph_A Formaldehyde dismutase; 93.2 0.15 5.3E-06 47.1 6.7 97 172-268 180-299 (398)
328 4b7c_A Probable oxidoreductase 92.7 0.21 7.3E-06 44.9 6.8 91 171-269 143-249 (336)
329 3fpc_A NADP-dependent alcohol 92.7 0.31 1E-05 44.2 7.9 92 171-268 160-266 (352)
330 1dl6_A Transcription factor II 92.5 0.063 2.2E-06 35.2 2.2 32 70-110 10-42 (58)
331 3uog_A Alcohol dehydrogenase; 92.5 0.41 1.4E-05 43.6 8.5 92 171-270 183-289 (363)
332 3j20_Y 30S ribosomal protein S 92.4 0.047 1.6E-06 34.6 1.4 30 71-109 19-48 (50)
333 3two_A Mannitol dehydrogenase; 92.3 0.29 9.9E-06 44.3 7.1 87 174-269 173-266 (348)
334 2oo3_A Protein involved in cat 92.1 0.24 8E-06 43.6 6.0 103 164-272 82-202 (283)
335 3m6i_A L-arabinitol 4-dehydrog 92.1 0.57 1.9E-05 42.5 9.0 90 172-269 174-284 (363)
336 1uuf_A YAHK, zinc-type alcohol 92.1 0.48 1.6E-05 43.3 8.4 86 174-268 191-288 (369)
337 3ps9_A TRNA 5-methylaminomethy 91.7 0.96 3.3E-05 44.8 10.8 122 178-330 67-252 (676)
338 1cdo_A Alcohol dehydrogenase; 91.7 0.7 2.4E-05 42.1 9.1 92 171-268 186-294 (374)
339 3gms_A Putative NADPH:quinone 91.6 0.27 9.1E-06 44.3 6.0 93 169-269 136-244 (340)
340 1e3j_A NADP(H)-dependent ketos 91.6 0.7 2.4E-05 41.7 8.9 90 173-269 164-272 (352)
341 2j3h_A NADP-dependent oxidored 91.5 0.42 1.4E-05 43.0 7.3 90 171-268 149-255 (345)
342 2fzw_A Alcohol dehydrogenase c 91.4 0.74 2.5E-05 41.9 8.9 92 171-268 184-292 (373)
343 1e3i_A Alcohol dehydrogenase, 91.3 0.81 2.8E-05 41.7 9.1 93 171-269 189-298 (376)
344 3ip1_A Alcohol dehydrogenase, 91.3 0.96 3.3E-05 41.7 9.6 91 174-269 210-319 (404)
345 3jyn_A Quinone oxidoreductase; 91.1 0.54 1.8E-05 42.0 7.5 92 170-270 133-241 (325)
346 1p0f_A NADP-dependent alcohol 91.1 0.7 2.4E-05 42.1 8.4 92 171-268 185-293 (373)
347 2jhf_A Alcohol dehydrogenase E 91.0 0.87 3E-05 41.5 9.0 92 171-268 185-293 (374)
348 3jv7_A ADH-A; dehydrogenase, n 90.8 0.61 2.1E-05 42.0 7.7 90 174-269 168-271 (345)
349 3tos_A CALS11; methyltransfera 90.8 1.4 4.8E-05 38.1 9.5 40 229-270 180-219 (257)
350 2eih_A Alcohol dehydrogenase; 90.8 0.96 3.3E-05 40.6 9.0 88 173-269 162-266 (343)
351 3jyw_9 60S ribosomal protein L 90.7 0.17 5.7E-06 34.5 2.8 32 70-110 25-56 (72)
352 3pvc_A TRNA 5-methylaminomethy 90.5 1.2 4.2E-05 44.2 10.2 70 230-330 170-244 (689)
353 4dvj_A Putative zinc-dependent 90.5 1 3.6E-05 40.9 9.0 84 177-267 171-269 (363)
354 3qwb_A Probable quinone oxidor 90.4 0.67 2.3E-05 41.5 7.5 90 171-269 142-248 (334)
355 2jne_A Hypothetical protein YF 90.2 0.1 3.6E-06 37.5 1.4 33 67-110 28-60 (101)
356 3uko_A Alcohol dehydrogenase c 89.9 0.84 2.9E-05 41.7 7.8 94 170-269 186-296 (378)
357 1vj0_A Alcohol dehydrogenase, 89.5 0.81 2.8E-05 41.9 7.4 89 173-268 190-298 (380)
358 1yb5_A Quinone oxidoreductase; 89.3 0.9 3.1E-05 41.1 7.5 89 172-268 165-269 (351)
359 1rjw_A ADH-HT, alcohol dehydro 89.3 1.3 4.3E-05 39.8 8.4 87 174-268 161-261 (339)
360 4eye_A Probable oxidoreductase 89.2 0.96 3.3E-05 40.7 7.6 90 171-268 153-257 (342)
361 1qor_A Quinone oxidoreductase; 89.2 0.83 2.9E-05 40.7 7.1 88 172-269 135-240 (327)
362 2hcy_A Alcohol dehydrogenase 1 89.1 0.77 2.6E-05 41.4 6.9 88 174-269 166-270 (347)
363 3fbg_A Putative arginate lyase 89.0 2 6.9E-05 38.6 9.6 84 177-267 150-247 (346)
364 2j8z_A Quinone oxidoreductase; 88.9 1.2 4E-05 40.3 7.9 90 171-269 156-262 (354)
365 3goh_A Alcohol dehydrogenase, 88.9 0.63 2.1E-05 41.3 6.0 87 171-267 136-228 (315)
366 2k5c_A Uncharacterized protein 88.8 0.045 1.5E-06 37.8 -1.2 39 70-108 7-61 (95)
367 2d8a_A PH0655, probable L-thre 88.8 1.7 5.8E-05 39.1 8.9 90 172-269 163-268 (348)
368 2c0c_A Zinc binding alcohol de 88.4 1.4 4.9E-05 39.9 8.2 88 173-269 159-262 (362)
369 2dq4_A L-threonine 3-dehydroge 88.2 0.74 2.5E-05 41.4 6.1 88 172-268 160-262 (343)
370 2h6e_A ADH-4, D-arabinose 1-de 88.2 0.66 2.3E-05 41.7 5.8 86 177-269 170-270 (344)
371 3j21_i 50S ribosomal protein L 88.2 0.17 5.9E-06 35.5 1.4 32 70-110 34-65 (83)
372 1qyp_A RNA polymerase II; tran 88.1 0.15 5.2E-06 33.2 1.0 40 71-110 15-55 (57)
373 2cf5_A Atccad5, CAD, cinnamyl 88.1 0.61 2.1E-05 42.3 5.4 88 174-268 176-275 (357)
374 2jrp_A Putative cytoplasmic pr 88.1 0.22 7.4E-06 34.8 1.8 27 72-109 3-29 (81)
375 1jvb_A NAD(H)-dependent alcoho 88.0 0.74 2.5E-05 41.5 6.0 87 173-268 166-271 (347)
376 2zb4_A Prostaglandin reductase 87.9 1.2 4E-05 40.3 7.3 90 172-269 153-261 (357)
377 3iz5_m 60S ribosomal protein L 87.7 0.2 6.9E-06 35.8 1.5 32 70-110 35-66 (92)
378 1wly_A CAAR, 2-haloacrylate re 87.6 1.8 6E-05 38.7 8.2 89 172-269 140-245 (333)
379 3cc2_Z 50S ribosomal protein L 87.4 0.17 5.9E-06 37.8 1.1 33 69-110 58-90 (116)
380 4dup_A Quinone oxidoreductase; 87.3 1.4 5E-05 39.7 7.5 91 171-269 161-266 (353)
381 2zig_A TTHA0409, putative modi 87.2 1 3.6E-05 39.7 6.3 56 248-316 77-132 (297)
382 4eez_A Alcohol dehydrogenase 1 87.0 1.8 6.1E-05 38.8 7.9 89 174-268 160-263 (348)
383 3izc_m 60S ribosomal protein R 87.0 0.23 7.8E-06 35.5 1.4 32 70-110 35-66 (92)
384 4dcm_A Ribosomal RNA large sub 86.8 4.4 0.00015 37.0 10.5 101 168-273 28-141 (375)
385 1zkd_A DUF185; NESG, RPR58, st 86.3 2.5 8.4E-05 38.9 8.4 67 178-245 81-163 (387)
386 4a17_Y RPL37A, 60S ribosomal p 86.1 0.21 7.1E-06 36.4 0.8 32 70-110 35-66 (103)
387 2c7p_A Modification methylase 86.0 1.5 5.2E-05 39.3 6.8 61 177-238 10-78 (327)
388 1piw_A Hypothetical zinc-type 85.8 0.57 1.9E-05 42.5 3.9 88 173-268 175-276 (360)
389 1ffk_W Ribosomal protein L37AE 85.8 0.21 7.1E-06 34.3 0.7 33 69-110 25-57 (73)
390 4a2c_A Galactitol-1-phosphate 85.7 3.1 0.00011 37.1 8.8 93 172-270 155-262 (346)
391 1yqd_A Sinapyl alcohol dehydro 85.4 1.4 4.7E-05 40.1 6.3 88 174-268 183-282 (366)
392 2akl_A PHNA-like protein PA012 85.1 0.38 1.3E-05 36.5 1.9 30 72-111 28-57 (138)
393 1tfi_A Transcriptional elongat 84.4 0.29 9.9E-06 30.9 0.8 39 70-108 8-47 (50)
394 1g55_A DNA cytosine methyltran 83.8 1.2 4.2E-05 40.2 5.1 61 179-239 3-76 (343)
395 2k4x_A 30S ribosomal protein S 83.5 0.57 2E-05 30.2 2.0 30 71-109 18-47 (55)
396 1iz0_A Quinone oxidoreductase; 83.4 1.1 3.9E-05 39.3 4.7 84 175-268 123-218 (302)
397 3nx4_A Putative oxidoreductase 83.2 2 6.7E-05 38.1 6.2 81 180-268 149-241 (324)
398 2zwa_A Leucine carboxyl methyl 83.2 17 0.00056 36.0 13.5 83 233-318 219-307 (695)
399 1twf_L ABC10-alpha, DNA-direct 82.7 0.73 2.5E-05 31.3 2.3 28 69-106 26-53 (70)
400 3q87_A Putative uncharacterize 82.4 0.32 1.1E-05 37.1 0.5 26 95-120 96-121 (125)
401 3j21_g 50S ribosomal protein L 82.3 0.65 2.2E-05 29.4 1.8 29 68-109 11-39 (51)
402 1wii_A Hypothetical UPF0222 pr 82.0 0.38 1.3E-05 34.0 0.8 39 70-111 22-60 (85)
403 4f3n_A Uncharacterized ACR, CO 82.0 1.1 3.6E-05 41.9 3.9 45 178-222 138-187 (432)
404 1boo_A Protein (N-4 cytosine-s 81.7 3.1 0.00011 37.1 6.9 44 227-270 29-86 (323)
405 3po3_S Transcription elongatio 81.0 0.94 3.2E-05 36.9 2.9 41 69-109 135-176 (178)
406 4h0n_A DNMT2; SAH binding, tra 80.4 1.6 5.5E-05 39.3 4.5 116 179-317 4-146 (333)
407 1gh9_A 8.3 kDa protein (gene M 80.1 0.63 2.2E-05 31.7 1.3 30 71-111 4-33 (71)
408 3ga8_A HTH-type transcriptiona 80.1 0.25 8.4E-06 34.4 -0.8 39 72-110 3-48 (78)
409 3gaz_A Alcohol dehydrogenase s 79.9 4.7 0.00016 36.0 7.6 89 171-268 144-246 (343)
410 3krt_A Crotonyl COA reductase; 79.6 4.7 0.00016 37.7 7.7 88 173-268 224-344 (456)
411 4a0s_A Octenoyl-COA reductase/ 79.3 6.9 0.00024 36.3 8.8 87 173-268 216-336 (447)
412 2b5w_A Glucose dehydrogenase; 79.2 3.5 0.00012 37.1 6.5 84 179-269 174-274 (357)
413 2cdc_A Glucose dehydrogenase g 78.8 4.6 0.00016 36.5 7.2 84 178-269 181-279 (366)
414 3g7u_A Cytosine-specific methy 78.5 2.7 9.2E-05 38.5 5.5 43 179-222 3-45 (376)
415 3ggo_A Prephenate dehydrogenas 78.0 9.9 0.00034 33.6 9.0 85 178-265 33-125 (314)
416 1jdq_A TM006 protein, hypothet 77.9 12 0.0004 27.0 7.7 69 233-328 26-96 (98)
417 3j20_W 30S ribosomal protein S 77.8 1.3 4.3E-05 29.2 2.1 41 65-113 9-49 (63)
418 2km1_A Protein DRE2; yeast, an 77.8 1.6 5.5E-05 33.7 3.1 42 225-266 53-96 (136)
419 1qxf_A GR2, 30S ribosomal prot 77.5 1.1 3.8E-05 29.7 1.8 37 69-113 5-41 (66)
420 1xa0_A Putative NADPH dependen 77.5 3.3 0.00011 36.7 5.7 86 174-268 145-246 (328)
421 3h0g_I DNA-directed RNA polyme 77.3 2.7 9.1E-05 31.4 4.2 38 72-109 73-111 (113)
422 1tt7_A YHFP; alcohol dehydroge 76.5 3.5 0.00012 36.6 5.6 86 174-268 146-247 (330)
423 3h0g_L DNA-directed RNA polyme 76.4 1.7 5.8E-05 28.7 2.5 32 69-110 19-50 (63)
424 3ce6_A Adenosylhomocysteinase; 75.9 5 0.00017 38.1 6.7 86 175-267 271-360 (494)
425 3lvj_C Sulfurtransferase TUSA; 75.3 17 0.0006 25.0 8.9 72 232-330 9-80 (82)
426 3iht_A S-adenosyl-L-methionine 74.5 4 0.00014 32.3 4.6 86 178-270 41-149 (174)
427 2qrv_A DNA (cytosine-5)-methyl 73.2 6.1 0.00021 34.8 6.1 62 177-238 15-90 (295)
428 2fiy_A Protein FDHE homolog; F 73.0 0.82 2.8E-05 40.7 0.4 41 70-111 181-221 (309)
429 2vn8_A Reticulon-4-interacting 72.7 13 0.00045 33.5 8.5 86 175-268 181-280 (375)
430 3tqh_A Quinone oxidoreductase; 72.6 12 0.00043 32.8 8.2 88 171-267 146-244 (321)
431 2j6a_A Protein TRM112; transla 71.9 1.1 3.7E-05 34.9 0.7 28 95-122 106-133 (141)
432 3u5c_b RP61, YS20, 40S ribosom 71.7 2.5 8.7E-05 29.3 2.5 42 64-113 27-68 (82)
433 4a27_A Synaptic vesicle membra 71.2 4.9 0.00017 36.0 5.2 88 171-268 136-238 (349)
434 4dio_A NAD(P) transhydrogenase 70.4 5.9 0.0002 36.6 5.5 91 177-268 189-312 (405)
435 3dmg_A Probable ribosomal RNA 70.3 8.1 0.00028 35.3 6.5 106 164-273 33-144 (381)
436 2xzm_6 RPS27E; ribosome, trans 70.0 2.2 7.6E-05 29.5 1.9 40 66-113 27-66 (81)
437 4e12_A Diketoreductase; oxidor 69.5 7.5 0.00026 33.7 5.9 80 179-265 5-118 (283)
438 3k1f_M Transcription initiatio 69.1 1.6 5.4E-05 35.1 1.2 31 71-110 21-54 (197)
439 3p2y_A Alanine dehydrogenase/p 68.1 5.7 0.0002 36.3 4.9 89 177-267 183-301 (381)
440 2eez_A Alanine dehydrogenase; 67.6 2.3 7.8E-05 38.7 2.1 91 176-268 164-266 (369)
441 3hz7_A Uncharacterized protein 67.2 12 0.0004 26.3 5.4 60 245-331 12-73 (87)
442 3gqv_A Enoyl reductase; medium 66.3 13 0.00043 33.6 6.9 85 176-268 163-263 (371)
443 2vhw_A Alanine dehydrogenase; 66.0 4.8 0.00016 36.7 4.0 91 176-268 166-268 (377)
444 3iz6_X 40S ribosomal protein S 65.9 3.2 0.00011 29.1 2.1 41 65-113 30-70 (86)
445 1pjc_A Protein (L-alanine dehy 65.2 5.9 0.0002 35.8 4.4 91 177-269 166-268 (361)
446 2lv2_A Insulinoma-associated p 64.6 3.1 0.00011 29.2 1.9 46 67-112 24-70 (85)
447 4fgs_A Probable dehydrogenase 64.6 27 0.00091 30.2 8.3 92 176-269 27-160 (273)
448 3c24_A Putative oxidoreductase 64.3 26 0.0009 30.1 8.4 81 179-265 12-98 (286)
449 3u50_C Telomerase-associated p 63.9 2.6 8.8E-05 34.0 1.5 29 69-107 40-68 (172)
450 2f1k_A Prephenate dehydrogenas 63.7 16 0.00055 31.2 6.8 81 180-265 2-88 (279)
451 1pqv_S STP-alpha, transcriptio 63.7 2.3 7.8E-05 37.9 1.2 40 69-108 266-306 (309)
452 2ew2_A 2-dehydropantoate 2-red 63.4 36 0.0012 29.3 9.2 84 179-267 4-107 (316)
453 4eso_A Putative oxidoreductase 63.0 27 0.00092 29.4 8.1 91 177-269 7-139 (255)
454 6rxn_A Rubredoxin; electron tr 62.9 4.8 0.00016 24.7 2.3 33 71-106 4-38 (46)
455 1vd4_A Transcription initiatio 62.5 1.8 6E-05 28.0 0.2 41 70-112 13-53 (62)
456 3o9x_A Uncharacterized HTH-typ 62.4 1.2 4E-05 34.1 -0.8 39 73-111 4-49 (133)
457 3h0g_I DNA-directed RNA polyme 62.2 4.1 0.00014 30.4 2.3 37 71-112 4-40 (113)
458 2lce_A B-cell lymphoma 6 prote 61.6 3.2 0.00011 27.5 1.5 43 69-111 15-58 (74)
459 1bg6_A N-(1-D-carboxylethyl)-L 61.2 21 0.00074 31.5 7.4 84 179-267 5-108 (359)
460 3b1f_A Putative prephenate deh 61.0 26 0.00089 30.1 7.7 84 179-265 7-98 (290)
461 1je3_A EC005, hypothetical 8.6 60.9 17 0.00058 26.1 5.4 68 232-326 26-94 (97)
462 2vpb_A Hpygo1, pygopus homolog 60.3 4 0.00014 27.1 1.7 33 67-110 4-37 (65)
463 4gzn_C ZFP-57, zinc finger pro 59.5 2.9 9.9E-05 27.1 0.9 42 70-111 3-45 (60)
464 3ubt_Y Modification methylase 59.5 11 0.00038 33.3 5.1 117 179-316 1-139 (331)
465 1l1o_C Replication protein A 7 59.4 3.7 0.00013 33.4 1.7 33 70-112 42-76 (181)
466 1zcj_A Peroxisomal bifunctiona 59.4 28 0.00094 32.6 8.0 82 178-266 37-148 (463)
467 1twf_I B12.6, DNA-directed RNA 59.2 5.4 0.00019 30.1 2.5 41 71-111 72-113 (122)
468 2kn9_A Rubredoxin; metalloprot 59.1 8.4 0.00029 26.8 3.2 38 69-106 25-68 (81)
469 4e21_A 6-phosphogluconate dehy 58.7 40 0.0014 30.3 8.7 83 178-265 22-112 (358)
470 3k7a_M Transcription initiatio 58.5 4.7 0.00016 36.3 2.4 31 71-110 21-54 (345)
471 3o26_A Salutaridine reductase; 58.5 65 0.0022 27.4 10.0 64 177-242 11-102 (311)
472 1l7d_A Nicotinamide nucleotide 58.3 10 0.00035 34.5 4.7 90 177-268 171-294 (384)
473 2g5c_A Prephenate dehydrogenas 57.9 32 0.0011 29.3 7.7 84 180-266 3-94 (281)
474 1k81_A EIF-2-beta, probable tr 57.8 2.5 8.5E-05 24.5 0.3 32 73-110 2-33 (36)
475 2kdx_A HYPA, hydrogenase/ureas 57.6 4.5 0.00015 30.3 1.8 29 69-108 71-100 (119)
476 3d1l_A Putative NADP oxidoredu 57.3 25 0.00086 29.7 6.9 83 179-266 11-100 (266)
477 1wfl_A Zinc finger protein 216 56.9 17 0.00059 24.7 4.4 31 70-114 24-54 (74)
478 3qt1_I DNA-directed RNA polyme 56.8 6.4 0.00022 30.2 2.6 37 71-112 24-60 (133)
479 3grk_A Enoyl-(acyl-carrier-pro 56.6 77 0.0026 27.2 10.1 93 176-270 29-171 (293)
480 3flo_B DNA polymerase alpha ca 56.2 5.3 0.00018 33.2 2.1 39 70-108 21-59 (206)
481 4fn4_A Short chain dehydrogena 56.2 71 0.0024 27.1 9.5 46 177-224 6-54 (254)
482 3qha_A Putative oxidoreductase 56.2 7.1 0.00024 34.1 3.2 80 179-266 16-103 (296)
483 1vk6_A NADH pyrophosphatase; 1 55.7 4.5 0.00015 35.1 1.7 29 72-109 108-136 (269)
484 2jvx_A NF-kappa-B essential mo 55.6 4.4 0.00015 22.1 1.0 12 70-81 2-13 (28)
485 3m7n_A Putative uncharacterize 55.5 5.3 0.00018 32.3 2.0 28 73-111 142-169 (179)
486 1l8d_A DNA double-strand break 55.0 3.2 0.00011 30.7 0.6 11 72-82 48-58 (112)
487 1x13_A NAD(P) transhydrogenase 54.8 13 0.00044 34.2 4.8 90 177-268 171-292 (401)
488 1wfp_A Zinc finger (AN1-like) 54.7 14 0.00049 25.1 3.7 31 71-115 25-55 (74)
489 1f0y_A HCDH, L-3-hydroxyacyl-C 54.7 26 0.00088 30.4 6.6 39 179-219 16-56 (302)
490 3ond_A Adenosylhomocysteinase; 54.4 47 0.0016 31.3 8.6 84 176-266 263-350 (488)
491 2dpo_A L-gulonate 3-dehydrogen 54.4 19 0.00064 32.0 5.6 80 179-265 7-120 (319)
492 3a43_A HYPD, hydrogenase nicke 54.3 5.1 0.00017 31.0 1.7 40 69-109 68-118 (139)
493 3pxx_A Carveol dehydrogenase; 54.3 98 0.0033 26.1 10.8 91 177-269 9-154 (287)
494 3me5_A Cytosine-specific methy 54.3 23 0.00078 33.4 6.5 55 166-221 70-130 (482)
495 3pi7_A NADH oxidoreductase; gr 54.2 51 0.0017 29.1 8.6 81 179-268 166-263 (349)
496 3ojo_A CAP5O; rossmann fold, c 53.5 53 0.0018 30.4 8.8 88 177-266 10-127 (431)
497 1ee8_A MUTM (FPG) protein; bet 53.3 4.3 0.00015 35.2 1.2 28 72-106 236-263 (266)
498 1lv3_A Hypothetical protein YA 53.3 4.5 0.00015 27.1 1.0 35 70-111 8-42 (68)
499 3ioy_A Short-chain dehydrogena 53.2 1.1E+02 0.0039 26.5 11.0 43 177-221 7-52 (319)
500 1nui_A DNA primase/helicase; z 53.2 5.3 0.00018 34.2 1.8 32 68-107 11-42 (255)
No 1
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.92 E-value=1.8e-24 Score=205.59 Aligned_cols=203 Identities=13% Similarity=0.146 Sum_probs=143.3
Q ss_pred cCCcccccccccccccccCcccccccCCCCCcCcccccchhhccCchhHHHHHHhHHHhhHhcCCCCcHHHHHHHHcccC
Q 019861 95 AGSSLQCNTCKKTYSGVGTHFDMTAASGSKDYGELMSPATEFFRMPFMSFIYERGWRQNFVWGGFPGPEKEFELMKGYLK 174 (334)
Q Consensus 95 ~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~l~~~l~ 174 (334)
.....+|.+|+.++.......+.+.. .+|...... ...|.... ....+.+...+.
T Consensus 50 ~l~~~~C~~Cg~v~~~~~~~~~~~y~---~~y~~~~~~--------------~~~~~~~~--------~~~~~~l~~~~~ 104 (416)
T 4e2x_A 50 RLAVGRCDSCEMVQLTEEVPRDLMFH---EVYPYHSSG--------------SSVMREHF--------AMLARDFLATEL 104 (416)
T ss_dssp EEEEEEETTTCCEEESSCCCHHHHSS---TTCCCCGGG--------------CHHHHHHH--------HHHHHHHHHTTT
T ss_pred cceEEECCCCCceeecCcCCHHHhcc---CCccCcCcC--------------CHHHHHHH--------HHHHHHHHHHhC
Confidence 45678999999998776554433321 122221100 01122111 223345666666
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-C-----------CCCCCCceEEEeCcccc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-S-----------NFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-~-----------~~~~~~fD~V~~~~vl~ 242 (334)
..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.|+++.... . ++++++||+|++.++||
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLC 182 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGG
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHH
Confidence 66788999999999999999999876 9999999999999998761110 0 23468999999999999
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEee---
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR--- 319 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~--- 319 (334)
|++|+..+|++++++|||||++++.+++... .. ...........|..+++.+++.++++++||++++...
T Consensus 183 h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~------~~-~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~ 255 (416)
T 4e2x_A 183 HIPYVQSVLEGVDALLAPDGVFVFEDPYLGD------IV-AKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQRLPV 255 (416)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEECHHH------HH-HHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEEECG
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEeCChHH------hh-hhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEEccC
Confidence 9999999999999999999999999887421 11 1111111124588899999999999999999988654
Q ss_pred -cCcEEEEEEEcC
Q 019861 320 -NRGFVMFTATKP 331 (334)
Q Consensus 320 -~g~~~~~~a~K~ 331 (334)
.|...++.+++.
T Consensus 256 ~~g~l~~~~~~~~ 268 (416)
T 4e2x_A 256 HGGEVRYTLARQG 268 (416)
T ss_dssp GGSEEEEEEEETT
T ss_pred CCCEEEEEEEeCC
Confidence 456666666553
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.87 E-value=4.8e-21 Score=170.67 Aligned_cols=158 Identities=13% Similarity=0.126 Sum_probs=119.2
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCcc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSG--LFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGAA 240 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~v 240 (334)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++.... .++.+.||+|++..+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~ 148 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFT 148 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESC
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeee
Confidence 358899999999999999998873 34689999999999999999876432 345578999999999
Q ss_pred ccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhh---h------------cCccCCCCHHHH
Q 019861 241 IHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ---I------------SGSYTFLSEREI 303 (334)
Q Consensus 241 l~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~t~~~l 303 (334)
|+|++++ ..+|++++++|||||++++.+...................+.. + ......++.+++
T Consensus 149 l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~ 228 (261)
T 4gek_A 149 LQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETH 228 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHH
T ss_pred eeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHH
Confidence 9999865 4789999999999999999988764332222222111111110 0 112345789999
Q ss_pred HHHHHhCCCcEEEEee-cCcEEEEEEEcCCC
Q 019861 304 EDLCRACGLVDFKCTR-NRGFVMFTATKPSQ 333 (334)
Q Consensus 304 ~~ll~~~Gf~~v~~~~-~g~~~~~~a~K~~~ 333 (334)
.++|+++||+.++.+. ...|..++|.|+.+
T Consensus 229 ~~~L~~AGF~~ve~~fq~~nF~~~iA~K~~~ 259 (261)
T 4gek_A 229 KARLHKAGFEHSELWFQCFNFGSLVALKAED 259 (261)
T ss_dssp HHHHHHHTCSEEEEEEEETTEEEEEEECCTT
T ss_pred HHHHHHcCCCeEEEEEEeccEEEEEEEEcCC
Confidence 9999999999998653 45678899999876
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.86 E-value=1.9e-20 Score=163.66 Aligned_cols=169 Identities=15% Similarity=0.224 Sum_probs=127.1
Q ss_pred HHHHHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCC
Q 019861 164 KEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKD 230 (334)
Q Consensus 164 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~ 230 (334)
...+.+...+. ..++.+|||||||+|.++..+++..+..+++|+|+++.+++.++++..... +++ +
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~ 108 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-E 108 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-S
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-C
Confidence 33455555554 456789999999999999999999767799999999999999998865321 233 7
Q ss_pred CceEEEeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhh--------------hhcCc
Q 019861 231 SIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--------------QISGS 294 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~ 294 (334)
+||+|++..+++|++++. .+|++++++|+|||++++.++...............+.... ....+
T Consensus 109 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (234)
T 3dtn_A 109 KYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKL 188 (234)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----C
T ss_pred CceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhccc
Confidence 899999999999998776 59999999999999999999887543222222222221110 11245
Q ss_pred cCCCCHHHHHHHHHhCCCcEEEEe-ecCcEEEEEEEcCCC
Q 019861 295 YTFLSEREIEDLCRACGLVDFKCT-RNRGFVMFTATKPSQ 333 (334)
Q Consensus 295 ~~~~t~~~l~~ll~~~Gf~~v~~~-~~g~~~~~~a~K~~~ 333 (334)
...++.+++.++|+++||++++.. ....+.++.+.|+++
T Consensus 189 ~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~~~ 228 (234)
T 3dtn_A 189 DKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKTEG 228 (234)
T ss_dssp CCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECC--
T ss_pred ccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEeccc
Confidence 677899999999999999999854 456788999998875
No 4
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.86 E-value=5.5e-21 Score=165.44 Aligned_cols=160 Identities=18% Similarity=0.148 Sum_probs=122.3
Q ss_pred cccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----------CCCCCCCceEEEeCcc
Q 019861 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------SNFPKDSIDAVHAGAA 240 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------~~~~~~~fD~V~~~~v 240 (334)
+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.... .+++ ++||+|++..+
T Consensus 39 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~ 115 (220)
T 3hnr_A 39 EDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYA 115 (220)
T ss_dssp HHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESC
T ss_pred HHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcc
Confidence 333334678999999999999999999865 9999999999999999886511 1344 89999999999
Q ss_pred ccCCCCHHH--HHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHh----hhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 241 IHCWSSPST--GVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM----MQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 241 l~h~~d~~~--~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
++|++++.. +|+++.++|||||.+++.+++.................. ........+++.+++.++++++||++
T Consensus 116 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 195 (220)
T 3hnr_A 116 FHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHV 195 (220)
T ss_dssp GGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEE
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEE
Confidence 999999977 999999999999999999987653221111111111100 11111335679999999999999999
Q ss_pred EEEeecCcEEEEEEEcCCC
Q 019861 315 FKCTRNRGFVMFTATKPSQ 333 (334)
Q Consensus 315 v~~~~~g~~~~~~a~K~~~ 333 (334)
+.....+..+++.++|+..
T Consensus 196 ~~~~~~~~~w~~~~~~~~~ 214 (220)
T 3hnr_A 196 TFTRLNHFVWVMEATKQLE 214 (220)
T ss_dssp EEEECSSSEEEEEEEECSC
T ss_pred EEeeccceEEEEeehhhhh
Confidence 9888888888888888753
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.85 E-value=8.5e-21 Score=163.58 Aligned_cols=166 Identities=17% Similarity=0.162 Sum_probs=122.6
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFP 228 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~ 228 (334)
...+.+.+.+...++ +|||+|||+|.++..+++. +..+++|+|+++.+++.+++++... .+++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC
Confidence 344566666665555 9999999999999999988 4459999999999999999885432 1456
Q ss_pred CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHH-HHHHHHH----hhhhcCccCCCCHHHH
Q 019861 229 KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-SRLLRQN----MMQISGSYTFLSEREI 303 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~t~~~l 303 (334)
+++||+|++..+++|++++..+|++++++|+|||.+++.++..... .... ....... ......+...++.+++
T Consensus 109 ~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKE--LRDSISAEMIRKNPDWKEFNRKNISQENVERF 186 (219)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHH--HHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHH
T ss_pred cccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHH--HHHHHHHHHHHhHHHHHhhhhhccccCCHHHH
Confidence 7899999999999999999999999999999999999987654320 1110 0111110 0001124566789999
Q ss_pred HHHHHhCCCcEEEEeecCcEEEEEEEcCCC
Q 019861 304 EDLCRACGLVDFKCTRNRGFVMFTATKPSQ 333 (334)
Q Consensus 304 ~~ll~~~Gf~~v~~~~~g~~~~~~a~K~~~ 333 (334)
.++|+++||++++........++..+|+.+
T Consensus 187 ~~~l~~aGf~~v~~~~~~~~~~~~~~k~~~ 216 (219)
T 3dlc_A 187 QNVLDEIGISSYEIILGDEGFWIIISKTDQ 216 (219)
T ss_dssp HHHHHHHTCSSEEEEEETTEEEEEEBCCSC
T ss_pred HHHHHHcCCCeEEEEecCCceEEEEecccc
Confidence 999999999999877655555556666543
No 6
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.84 E-value=3.5e-20 Score=160.26 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=122.9
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCCc
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDSI 232 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~f 232 (334)
.+...+...++.+|||+|||+|.++..+++.+ +..+++|+|+++.+++.++++.... .++++++|
T Consensus 28 ~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 107 (219)
T 3dh0_A 28 KVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTV 107 (219)
T ss_dssp HHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCE
T ss_pred HHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCe
Confidence 34444556668899999999999999999885 5569999999999999999876321 14567899
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
|+|++..+++|++++..+|+++.++|+|||++++.++....... ...+...++.+++.++++++||
T Consensus 108 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~Gf 173 (219)
T 3dh0_A 108 DFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK--------------GPPPEEVYSEWEVGLILEDAGI 173 (219)
T ss_dssp EEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS--------------SCCGGGSCCHHHHHHHHHHTTC
T ss_pred eEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc--------------CCchhcccCHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999887653211 1224567899999999999999
Q ss_pred cEEEEee-cCcEEEEEEEcCCC
Q 019861 313 VDFKCTR-NRGFVMFTATKPSQ 333 (334)
Q Consensus 313 ~~v~~~~-~g~~~~~~a~K~~~ 333 (334)
++++... .+.+..++++|+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~k~~~ 195 (219)
T 3dh0_A 174 RVGRVVEVGKYCFGVYAMIVKQ 195 (219)
T ss_dssp EEEEEEEETTTEEEEEEECC--
T ss_pred EEEEEEeeCCceEEEEEEeccc
Confidence 9988554 55777888888643
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.84 E-value=4.6e-20 Score=163.94 Aligned_cols=147 Identities=18% Similarity=0.199 Sum_probs=117.0
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDSI 232 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~f 232 (334)
+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++.... .++++++|
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~f 104 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERF 104 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCE
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCE
Confidence 3455556666788999999999999999999886 9999999999999999875321 25677899
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHh--hhhcCccCCCCHHHHHHHHHhC
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM--MQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
|+|++..+++|++|+..+|++++++|+|||++++.++..... +....+.... .....+..+++.+++.++|+++
T Consensus 105 D~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 180 (260)
T 1vl5_A 105 HIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEA 180 (260)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHH
T ss_pred EEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHC
Confidence 999999999999999999999999999999999988765432 2222221111 1123467789999999999999
Q ss_pred CCcEEEEee
Q 019861 311 GLVDFKCTR 319 (334)
Q Consensus 311 Gf~~v~~~~ 319 (334)
||+++....
T Consensus 181 Gf~~~~~~~ 189 (260)
T 1vl5_A 181 GFELEELHC 189 (260)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999877543
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.83 E-value=3e-19 Score=159.63 Aligned_cols=151 Identities=22% Similarity=0.258 Sum_probs=118.1
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CCCCCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFPKD 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~~ 230 (334)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+++|+|+|+.+++.++++.... .+++++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 128 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDA 128 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCC
Confidence 3455666666778999999999999999998864 459999999999999999875421 145678
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
+||+|++..+++|++++..+|+++.++|+|||++++.++....... .........+.....+..+++.+++.++++++
T Consensus 129 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 206 (273)
T 3bus_A 129 SFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVE--GAKKEAVDAFRAGGGVLSLGGIDEYESDVRQA 206 (273)
T ss_dssp CEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCC--HHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHT
T ss_pred CccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCC--hhHHHHHHHHHhhcCccCCCCHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999987653211 11111111111223366789999999999999
Q ss_pred CCcEEEEee
Q 019861 311 GLVDFKCTR 319 (334)
Q Consensus 311 Gf~~v~~~~ 319 (334)
||++++...
T Consensus 207 Gf~~~~~~~ 215 (273)
T 3bus_A 207 ELVVTSTVD 215 (273)
T ss_dssp TCEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999987654
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.82 E-value=2e-19 Score=157.97 Aligned_cols=146 Identities=21% Similarity=0.255 Sum_probs=117.1
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCCce
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDSID 233 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~fD 233 (334)
.+...+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.... .++++++||
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 89 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFD 89 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEE
T ss_pred hHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEE
Confidence 445556667789999999999999999999886 9999999999999999875321 246678999
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHh--hhhcCccCCCCHHHHHHHHHhCC
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM--MQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
+|++..+++|++++..+|++++++|+|||++++.++..... +....+.... .....|.+.++.+++.++++++|
T Consensus 90 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 90 IITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred EEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999999999988876432 2222222111 11245678899999999999999
Q ss_pred CcEEEEee
Q 019861 312 LVDFKCTR 319 (334)
Q Consensus 312 f~~v~~~~ 319 (334)
|++++...
T Consensus 166 f~~~~~~~ 173 (239)
T 1xxl_A 166 LAYQDIQK 173 (239)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99877544
No 10
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.82 E-value=3.7e-20 Score=162.66 Aligned_cols=137 Identities=12% Similarity=0.050 Sum_probs=109.3
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEeCccccCCCCH
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHAGAAIHCWSSP 247 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~~~vl~h~~d~ 247 (334)
++.+|||||||+|.++..+++.++ +++|+|+|+.+++.++++.... ..+++++||+|++.++|||++|+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 119 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP 119 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH
Confidence 467999999999999999999887 8999999999999999876421 12467899999999999999999
Q ss_pred HHHHHHHH-HcccCCcEEEEEEeccCCCCCchHHHHHHHH---------HhhhhcCccCCCCHHHHHHHHHhCCCcEEEE
Q 019861 248 STGVAEIS-RVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ---------NMMQISGSYTFLSEREIEDLCRACGLVDFKC 317 (334)
Q Consensus 248 ~~~L~~i~-r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~ 317 (334)
..+|++++ ++|||||++++.+++.... ......... .......|.++++.+++.++++++||++++.
T Consensus 120 ~~~l~~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 196 (250)
T 2p7i_A 120 VALLKRINDDWLAEGGRLFLVCPNANAV---SRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYR 196 (250)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEECTTCH---HHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhcCCCCEEEEEcCChHHH---HHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEE
Confidence 99999999 9999999999999986431 110000000 0011234678899999999999999998875
Q ss_pred e
Q 019861 318 T 318 (334)
Q Consensus 318 ~ 318 (334)
.
T Consensus 197 ~ 197 (250)
T 2p7i_A 197 S 197 (250)
T ss_dssp E
T ss_pred e
Confidence 4
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.82 E-value=5.2e-19 Score=152.11 Aligned_cols=152 Identities=22% Similarity=0.307 Sum_probs=118.6
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CCCCCCCceEEE
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SNFPKDSIDAVH 236 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~~~~~fD~V~ 236 (334)
....+...+. ++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.... .+ ++++||+|+
T Consensus 33 ~~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~fD~v~ 107 (211)
T 3e23_A 33 TLTKFLGELP--AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRLGRPVRTMLFHQLD-AIDAYDAVW 107 (211)
T ss_dssp HHHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTSCCEECCGGGCC-CCSCEEEEE
T ss_pred HHHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhcCCceEEeeeccCC-CCCcEEEEE
Confidence 3344444444 478999999999999999999865 9999999999999999875321 12 578999999
Q ss_pred eCccccCCC--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC-Cc
Q 019861 237 AGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG-LV 313 (334)
Q Consensus 237 ~~~vl~h~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G-f~ 313 (334)
+..+++|++ ++..+|++++++|+|||++++..+....... .....+..+++.+++.++++++| |+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~aG~f~ 175 (211)
T 3e23_A 108 AHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR------------DKLARYYNYPSEEWLRARYAEAGTWA 175 (211)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE------------CTTSCEECCCCHHHHHHHHHHHCCCS
T ss_pred ecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc------------cccchhccCCCHHHHHHHHHhCCCcE
Confidence 999999999 7789999999999999999999876543211 11123567889999999999999 99
Q ss_pred EEEEeec---------CcEEEEEEEcCCC
Q 019861 314 DFKCTRN---------RGFVMFTATKPSQ 333 (334)
Q Consensus 314 ~v~~~~~---------g~~~~~~a~K~~~ 333 (334)
+++.... ..|+.++.+|++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 176 SVAVESSEGKGFDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCCC
T ss_pred EEEEEeccCCCCCCCCceEEEEEEecCcc
Confidence 9885422 1266777777654
No 12
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.81 E-value=6.3e-19 Score=159.65 Aligned_cols=149 Identities=18% Similarity=0.153 Sum_probs=115.5
Q ss_pred HHHHHHccc----CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------C
Q 019861 165 EFELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------S 225 (334)
Q Consensus 165 ~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~ 225 (334)
..+.+...+ ...++.+|||||||+|.++..+++.. ..+++|+|+++.+++.++++.... .
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 144 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEI 144 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccC
Confidence 344555566 55678899999999999999999873 239999999999999999875321 2
Q ss_pred CCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHH
Q 019861 226 NFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 305 (334)
Q Consensus 226 ~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ 305 (334)
++++++||+|++..+++|++++..+|++++++|||||++++.++..........+ ..+...+ ....+.+.+++.+
T Consensus 145 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~ 219 (297)
T 2o57_A 145 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSI-QPILDRI----KLHDMGSLGLYRS 219 (297)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGG-HHHHHHH----TCSSCCCHHHHHH
T ss_pred CCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHH-HHHHHHh----cCCCCCCHHHHHH
Confidence 4667899999999999999999999999999999999999999886543222211 1111111 1334679999999
Q ss_pred HHHhCCCcEEEEee
Q 019861 306 LCRACGLVDFKCTR 319 (334)
Q Consensus 306 ll~~~Gf~~v~~~~ 319 (334)
+++++||++++...
T Consensus 220 ~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 220 LAKECGLVTLRTFS 233 (297)
T ss_dssp HHHHTTEEEEEEEE
T ss_pred HHHHCCCeEEEEEE
Confidence 99999999887643
No 13
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.81 E-value=3.9e-19 Score=156.12 Aligned_cols=147 Identities=14% Similarity=0.135 Sum_probs=115.6
Q ss_pred HHHHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CCCCCCCceEE
Q 019861 165 EFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SNFPKDSIDAV 235 (334)
Q Consensus 165 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~~~~~fD~V 235 (334)
..+.+..++. ..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++++.-. .++++++||+|
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEGKFNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHTTSEEECSCHHHHHHTSCTTCBSEE
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHhhcceeeccHHHHhhhcCCCCeeEE
Confidence 3444544443 23468999999999999999999876 8999999999999998752210 15778999999
Q ss_pred EeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 236 HAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 236 ~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
++..+++|++++ ..+|+++.++|||||++++.+++.... .. ....+ ....|..+++.+++.++++++||+
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~----~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---YS----LINFY-IDPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---HH----HHHHT-TSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---HH----HHHHh-cCccccccCCHHHHHHHHHHCCCe
Confidence 999999999966 899999999999999999999985421 11 11112 234577889999999999999999
Q ss_pred EEEEeecC
Q 019861 314 DFKCTRNR 321 (334)
Q Consensus 314 ~v~~~~~g 321 (334)
+++....+
T Consensus 178 ~~~~~~~~ 185 (240)
T 3dli_A 178 DVKIEFFE 185 (240)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 98866544
No 14
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.81 E-value=3.3e-19 Score=156.39 Aligned_cols=145 Identities=19% Similarity=0.255 Sum_probs=115.0
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------CCCCCCCce
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----------SNFPKDSID 233 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----------~~~~~~~fD 233 (334)
..+.+...+. ++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.... .++++++||
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD 118 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFE 118 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEE
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCcc
Confidence 3455555555 478999999999999999999865 9999999999999999863221 246688999
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
+|++.++++|++++..+|+++.++|+|||++++.++..........+ ........+.+.++.+++.++++++||+
T Consensus 119 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 119 AIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSY-----PRLYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp EEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG-----GGGGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred EEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh-----hhhccccccccCCCHHHHHHHHHHcCCE
Confidence 99999999999999999999999999999999999876432111111 1112223466789999999999999999
Q ss_pred EEEEe
Q 019861 314 DFKCT 318 (334)
Q Consensus 314 ~v~~~ 318 (334)
+++..
T Consensus 194 ~~~~~ 198 (242)
T 3l8d_A 194 VVDGI 198 (242)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 98854
No 15
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.81 E-value=4.8e-19 Score=157.32 Aligned_cols=152 Identities=16% Similarity=0.197 Sum_probs=120.9
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------------CCCCC
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------------SNFPK 229 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------------~~~~~ 229 (334)
.....+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++.... .++++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~ 118 (266)
T 3ujc_A 40 GLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPE 118 (266)
T ss_dssp HHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCT
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCC
Confidence 34556677777777788899999999999999999974 349999999999999999875431 24668
Q ss_pred CCceEEEeCccccCC--CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHH
Q 019861 230 DSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~--~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 307 (334)
++||+|++..+++|+ .++..+|+++.++|+|||++++.++............. .... ..+..+++.+++.+++
T Consensus 119 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~l 193 (266)
T 3ujc_A 119 NNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFK---EYVK--QRKYTLITVEEYADIL 193 (266)
T ss_dssp TCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHH---HHHH--HHTCCCCCHHHHHHHH
T ss_pred CcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHH---HHHh--cCCCCCCCHHHHHHHH
Confidence 899999999999999 78899999999999999999999987654222222221 1111 1256788999999999
Q ss_pred HhCCCcEEEEee
Q 019861 308 RACGLVDFKCTR 319 (334)
Q Consensus 308 ~~~Gf~~v~~~~ 319 (334)
+++||++++...
T Consensus 194 ~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 194 TACNFKNVVSKD 205 (266)
T ss_dssp HHTTCEEEEEEE
T ss_pred HHcCCeEEEEEe
Confidence 999999888654
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.81 E-value=4.4e-19 Score=156.97 Aligned_cols=150 Identities=15% Similarity=0.116 Sum_probs=118.0
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------C
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------N 226 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~ 226 (334)
.....+.+...+...++.+|||||||+|.++..+++.. ..+++|+|+++.+++.++++..... +
T Consensus 21 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 21 TEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 99 (256)
T ss_dssp CHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCC
T ss_pred CHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCC
Confidence 34455666777777778999999999999999999874 3499999999999999998764321 2
Q ss_pred CCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHH
Q 019861 227 FPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 306 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 306 (334)
+ +++||+|++..+++|++++..+|++++++|||||++++.++..........+ ...+. ...+..+++.+++.++
T Consensus 100 ~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~ 173 (256)
T 1nkv_A 100 A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEI----AQACG-VSSTSDFLTLPGLVGA 173 (256)
T ss_dssp C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHH----HHTTT-CSCGGGSCCHHHHHHH
T ss_pred c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHH----HHHHh-cccccccCCHHHHHHH
Confidence 3 6789999999999999999999999999999999999998876433222211 11111 2335578899999999
Q ss_pred HHhCCCcEEEEe
Q 019861 307 CRACGLVDFKCT 318 (334)
Q Consensus 307 l~~~Gf~~v~~~ 318 (334)
++++||++++..
T Consensus 174 l~~aGf~~~~~~ 185 (256)
T 1nkv_A 174 FDDLGYDVVEMV 185 (256)
T ss_dssp HHTTTBCCCEEE
T ss_pred HHHCCCeeEEEE
Confidence 999999987754
No 17
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.81 E-value=1.4e-18 Score=155.00 Aligned_cols=151 Identities=14% Similarity=0.123 Sum_probs=117.7
Q ss_pred CcHHHHHHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------
Q 019861 161 GPEKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------- 224 (334)
Q Consensus 161 ~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------- 224 (334)
........+...+. ..++.+|||||||+|.++..+++. +..+++|+|+++.+++.++++....
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 29 GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD 107 (267)
T ss_dssp CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh
Confidence 34455555666665 556889999999999999999998 4569999999999999999886432
Q ss_pred CCCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHH
Q 019861 225 SNFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 304 (334)
Q Consensus 225 ~~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~ 304 (334)
.++++++||+|++..+++|+ ++..+|+++.++|+|||++++.++............. .+. .. ...+.+.+++.
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~--~~---~~~~~~~~~~~ 180 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEIND-FWM--DA---YPEIDTIPNQV 180 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHH-HHH--HH---CTTCEEHHHHH
T ss_pred CCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHH-HHH--Hh---CCCCCCHHHHH
Confidence 14567899999999999999 8999999999999999999999987543322222221 211 11 23567899999
Q ss_pred HHHHhCCCcEEEEee
Q 019861 305 DLCRACGLVDFKCTR 319 (334)
Q Consensus 305 ~ll~~~Gf~~v~~~~ 319 (334)
++++++||++++...
T Consensus 181 ~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 181 AKIHKAGYLPVATFI 195 (267)
T ss_dssp HHHHHTTEEEEEEEE
T ss_pred HHHHHCCCEEEEEEE
Confidence 999999999988654
No 18
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.80 E-value=1.8e-18 Score=153.07 Aligned_cols=152 Identities=14% Similarity=0.139 Sum_probs=117.5
Q ss_pred CCcHHHHHHHHccc-CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------
Q 019861 160 PGPEKEFELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------- 224 (334)
Q Consensus 160 ~~~~~~~~~l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------- 224 (334)
+........+...+ ...++.+|||||||+|.++..+++.++ .+++|+|+++.+++.++++....
T Consensus 28 ~~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 28 PGSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD 106 (257)
T ss_dssp SCCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT
T ss_pred CCCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 33445555566665 445678999999999999999999975 49999999999999999876532
Q ss_pred -CCCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHH
Q 019861 225 -SNFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 303 (334)
Q Consensus 225 -~~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l 303 (334)
.++++++||+|++..+++|+ ++..+|+++.++|+|||++++.+++.............+.. . ...+.+.+++
T Consensus 107 ~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~ 179 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD---A---YPEISVIPTC 179 (257)
T ss_dssp SCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH---H---CTTCCBHHHH
T ss_pred hCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH---h---CCCCCCHHHH
Confidence 14567899999999999999 89999999999999999999999875433222222222111 1 2336799999
Q ss_pred HHHHHhCCCcEEEEee
Q 019861 304 EDLCRACGLVDFKCTR 319 (334)
Q Consensus 304 ~~ll~~~Gf~~v~~~~ 319 (334)
.++++++||++++...
T Consensus 180 ~~~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 180 IDKMERAGYTPTAHFI 195 (257)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEE
Confidence 9999999999988543
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.80 E-value=9e-19 Score=156.89 Aligned_cols=153 Identities=18% Similarity=0.233 Sum_probs=117.1
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDSI 232 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~f 232 (334)
+.+.......++.+|||||||+|.++..+++.++..+++|+|+++.+++.+++++... .++++++|
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 106 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSF 106 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCE
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCe
Confidence 4444555556788999999999999999999977789999999999999999876432 14567899
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCC--CchHHHHHHHHHhhh--hcCccCCCCHHHHHHHHH
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF--NLIPFSRLLRQNMMQ--ISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~t~~~l~~ll~ 308 (334)
|+|++..+++|++++..+|+++.++|+|||++++.++...... ...+.....+..+.. ...+...++.+++.++|+
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 186 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQ 186 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHH
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHH
Confidence 9999999999999999999999999999999999987653321 111222222211111 122445678899999999
Q ss_pred hCCCcEEEEee
Q 019861 309 ACGLVDFKCTR 319 (334)
Q Consensus 309 ~~Gf~~v~~~~ 319 (334)
++||++++...
T Consensus 187 ~aGf~~v~~~~ 197 (276)
T 3mgg_A 187 ESGFEKIRVEP 197 (276)
T ss_dssp HTTCEEEEEEE
T ss_pred HCCCCeEEEee
Confidence 99999988553
No 20
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.80 E-value=2.3e-18 Score=159.87 Aligned_cols=163 Identities=13% Similarity=0.125 Sum_probs=124.3
Q ss_pred HHHcccCCCC-CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CC---CCC
Q 019861 168 LMKGYLKPVL-GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NF---PKD 230 (334)
Q Consensus 168 ~l~~~l~~~~-~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~---~~~ 230 (334)
.+...+...+ +.+|||||||+|.++..+++.++..+++++|+ +.+++.++++..... .. ..+
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 247 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGG 247 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTC
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCC
Confidence 3444444444 78999999999999999999988889999999 889999988754321 11 345
Q ss_pred CceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHH-HHhhhhcCccCCCCHHHHHHHH
Q 019861 231 SIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QNMMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~l~~ll 307 (334)
.||+|++.+++||++++ ..+|++++++|+|||++++.++..+.... .+...... ........+...++.++|.+++
T Consensus 248 ~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll 326 (352)
T 3mcz_A 248 AADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRV-TPALSADFSLHMMVNTNHGELHPTPWIAGVV 326 (352)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSS-SSHHHHHHHHHHHHHSTTCCCCCHHHHHHHH
T ss_pred CccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC-CCchHHHhhHHHHhhCCCCCcCCHHHHHHHH
Confidence 69999999999999977 78999999999999999999987754322 12222221 1222122345678999999999
Q ss_pred HhCCCcEEEEeecCcEEEEEEEcCCC
Q 019861 308 RACGLVDFKCTRNRGFVMFTATKPSQ 333 (334)
Q Consensus 308 ~~~Gf~~v~~~~~g~~~~~~a~K~~~ 333 (334)
+++||++++. ..|.+.+++++||+-
T Consensus 327 ~~aGf~~~~~-~~g~~~l~~a~kp~~ 351 (352)
T 3mcz_A 327 RDAGLAVGER-SIGRYTLLIGQRSSG 351 (352)
T ss_dssp HHTTCEEEEE-EETTEEEEEEECCCC
T ss_pred HHCCCceeee-ccCceEEEEEecCCC
Confidence 9999999985 456799999999863
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=2.6e-19 Score=152.99 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=112.5
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEeCccccCCC--C
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHAGAAIHCWS--S 246 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~~~vl~h~~--d 246 (334)
+.+|||+|||+|.++..++..+. +++|+|+++.+++.++++.... .++++++||+|++..+++|++ +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 67999999999999999999875 9999999999999999874321 145678999999999999997 8
Q ss_pred HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeec--CcEE
Q 019861 247 PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN--RGFV 324 (334)
Q Consensus 247 ~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~--g~~~ 324 (334)
+..+|+++.++|+|||++++.++....... +.....+..+++.+++.++++++||++++.... ..+.
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~~ 188 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEP-----------MYHPVATAYRWPLPELAQALETAGFQVTSSHWDPRFPHA 188 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEE-----------ECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTTSSEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhh-----------hhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCCCcch
Confidence 899999999999999999999987654211 111123556789999999999999999885532 3455
Q ss_pred EEEEEc
Q 019861 325 MFTATK 330 (334)
Q Consensus 325 ~~~a~K 330 (334)
.+...|
T Consensus 189 ~l~~~~ 194 (203)
T 3h2b_A 189 YLTAEA 194 (203)
T ss_dssp EEEEEE
T ss_pred hhhhhh
Confidence 544444
No 22
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=5.1e-19 Score=158.96 Aligned_cols=145 Identities=23% Similarity=0.298 Sum_probs=111.4
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEeC
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHAG 238 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~~ 238 (334)
.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++.... .++ +++||+|++.
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~ 124 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSN 124 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEE
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEc
Confidence 33444555668899999999999999999854 49999999999999999874211 133 5789999999
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhh-------hhcCccCCCCHHHHHHHHHhCC
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM-------QISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~t~~~l~~ll~~~G 311 (334)
.+++|++|+..+|++++++|+|||++++.++..... ..+...+..... ....+..+++.+++.++|+++|
T Consensus 125 ~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 201 (279)
T 3ccf_A 125 AMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNI---KYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQG 201 (279)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTT---HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHT
T ss_pred chhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcch---HHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcC
Confidence 999999999999999999999999999998875432 122222211111 1223456789999999999999
Q ss_pred CcEEEEe
Q 019861 312 LVDFKCT 318 (334)
Q Consensus 312 f~~v~~~ 318 (334)
|++++..
T Consensus 202 f~~~~~~ 208 (279)
T 3ccf_A 202 FDVTYAA 208 (279)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 9987754
No 23
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.80 E-value=1.7e-18 Score=156.64 Aligned_cols=137 Identities=9% Similarity=0.044 Sum_probs=103.3
Q ss_pred CCCCcEEEECCCcCHHHH----HHHHcCCCCeE--EEEeCCHHHHHHHHHHHhcCC-----------------------C
Q 019861 176 VLGGNIIDASCGSGLFSR----IFAKSGLFSLV--VALDYSENMLKQCYEFVQQES-----------------------N 226 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v--~giD~s~~~~~~a~~~~~~~~-----------------------~ 226 (334)
.++.+|||||||+|.++. .+...++...+ +|+|+|+.|++.++++..... +
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 456799999999997544 34444455544 999999999999998864310 1
Q ss_pred CCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhh--hcCccCCCCHHHHH
Q 019861 227 FPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ--ISGSYTFLSEREIE 304 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t~~~l~ 304 (334)
+++++||+|++.++|||++|+..+|++++++|||||++++.....+. .+...+...... ...+..+++.+++.
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS-----GWDKLWKKYGSRFPQDDLCQYITSDDLT 205 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS-----HHHHHHHHHGGGSCCCTTCCCCCHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc-----cHHHHHHHHHHhccCCCcccCCCHHHHH
Confidence 35789999999999999999999999999999999999998776432 222222121111 12256788999999
Q ss_pred HHHHhCCCcEEEE
Q 019861 305 DLCRACGLVDFKC 317 (334)
Q Consensus 305 ~ll~~~Gf~~v~~ 317 (334)
++|+++||+++..
T Consensus 206 ~~l~~aGf~~~~~ 218 (292)
T 2aot_A 206 QMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHCCCceEEE
Confidence 9999999988763
No 24
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.79 E-value=4e-19 Score=147.54 Aligned_cols=140 Identities=15% Similarity=0.184 Sum_probs=113.4
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CCCCCCCCceEEEeCccccCCCCH
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ESNFPKDSIDAVHAGAAIHCWSSP 247 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~~~~~~~fD~V~~~~vl~h~~d~ 247 (334)
...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++... +.++++++||+|++..+++|++++
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d~~~~~~~~D~v~~~~~l~~~~~~ 91 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDPKEIPDNSVDFILFANSFHDMDDK 91 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSGGGSCTTCEEEEEEESCSTTCSCH
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCCCCCCCCceEEEEEccchhcccCH
Confidence 345578999999999999999999875 999999999999999987221 135678899999999999999999
Q ss_pred HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeecC-cEEEE
Q 019861 248 STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNR-GFVMF 326 (334)
Q Consensus 248 ~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~g-~~~~~ 326 (334)
..+++++.++|+|||++++.++........ ..+...++.+++.++++ ||++++....+ ..+.+
T Consensus 92 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l 155 (170)
T 3i9f_A 92 QHVISEVKRILKDDGRVIIIDWRKENTGIG--------------PPLSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGL 155 (170)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSS--------------SCGGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccccccC--------------chHhhhcCHHHHHHHHh--CcEEEEccCCCCceEEE
Confidence 999999999999999999998876532111 12445689999999999 99999876554 44555
Q ss_pred EEEcC
Q 019861 327 TATKP 331 (334)
Q Consensus 327 ~a~K~ 331 (334)
+++|+
T Consensus 156 ~~~~~ 160 (170)
T 3i9f_A 156 VLKRK 160 (170)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 55543
No 25
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.79 E-value=1.7e-18 Score=153.06 Aligned_cols=151 Identities=17% Similarity=0.143 Sum_probs=111.1
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------CCCCCCCceEE
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----------SNFPKDSIDAV 235 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----------~~~~~~~fD~V 235 (334)
..+...+...++.+|||||||+|.++..+++.+. .+++|+|+++.+++.++++.... .++++++||+|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 112 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVV 112 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEE
Confidence 3556667766789999999999999999999874 48999999999999999876421 25667899999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCc--------------hHHHHHHHH-----HhhhhcCccC
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--------------IPFSRLLRQ-----NMMQISGSYT 296 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~--------------~~~~~~~~~-----~~~~~~~~~~ 296 (334)
++..+++|+.++..+|++++++|+|||++++.+++....... .++...+.. .+........
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (253)
T 3g5l_A 113 LSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKY 192 (253)
T ss_dssp EEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEE
T ss_pred EEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccE
Confidence 999999999999999999999999999999987653100000 000000000 0000000112
Q ss_pred CCCHHHHHHHHHhCCCcEEEEe
Q 019861 297 FLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 297 ~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
.++.+++.++|+++||++++..
T Consensus 193 ~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 193 HRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEE
T ss_pred ecCHHHHHHHHHHcCCeeeeee
Confidence 2399999999999999998865
No 26
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.79 E-value=3.4e-18 Score=156.12 Aligned_cols=146 Identities=18% Similarity=0.146 Sum_probs=115.8
Q ss_pred HHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CCCCCC
Q 019861 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFPKD 230 (334)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~~ 230 (334)
+.+.+.+. ..++.+|||||||+|.++..+++.. ..+|+|+|+++.+++.++++.... .+++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 45666666 6678899999999999999999882 249999999999999999875532 145678
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCC-CchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHh
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF-NLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 309 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 309 (334)
+||+|++..+++|+ ++..+|+++.++|||||++++.++...... ....+.......+ ...+++.+++.+++++
T Consensus 185 ~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~l~~ 258 (312)
T 3vc1_A 185 AVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHF-----ECNIHSRREYLRAMAD 258 (312)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHH-----TCCCCBHHHHHHHHHT
T ss_pred CEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhh-----cCCCCCHHHHHHHHHH
Confidence 99999999999999 699999999999999999999998876533 2223322222221 2357899999999999
Q ss_pred CCCcEEEEee
Q 019861 310 CGLVDFKCTR 319 (334)
Q Consensus 310 ~Gf~~v~~~~ 319 (334)
+||++++...
T Consensus 259 aGf~~~~~~~ 268 (312)
T 3vc1_A 259 NRLVPHTIVD 268 (312)
T ss_dssp TTEEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999888654
No 27
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.79 E-value=6.5e-19 Score=158.68 Aligned_cols=138 Identities=17% Similarity=0.157 Sum_probs=106.8
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeCccc
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAGAAI 241 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~~vl 241 (334)
+.+|||||||+|.++..+++.+. +++|+|+++.+++.+++++.... ++++++||+|++..++
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 67999999999999999999865 99999999999999998764321 1467899999999999
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhh--------hhcCccCCCCHHHHHHHHHhCCCc
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--------QISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
+|++++..+|+++.++|+|||++++.+++.......... ...+.... ....+..+++.+++.++++++||+
T Consensus 147 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 225 (285)
T 4htf_A 147 EWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMV-AGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQ 225 (285)
T ss_dssp GGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHH-TTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCE
T ss_pred hcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHH-hcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCc
Confidence 999999999999999999999999999875321000000 00000110 112345788999999999999999
Q ss_pred EEEEe
Q 019861 314 DFKCT 318 (334)
Q Consensus 314 ~v~~~ 318 (334)
+++..
T Consensus 226 v~~~~ 230 (285)
T 4htf_A 226 IMGKT 230 (285)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 88744
No 28
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.79 E-value=2.5e-18 Score=156.50 Aligned_cols=156 Identities=15% Similarity=0.183 Sum_probs=116.8
Q ss_pred CCCCcEEEECCCcCHHHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAGA 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~~ 239 (334)
.++.+|||||||+|.++..++ ...+..+++|+|+++.+++.++++..... +++ ++||+|++..
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~ 195 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG 195 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC
Confidence 457899999999999999985 44556799999999999999999875321 344 8999999999
Q ss_pred cccCCCCHHH---HHHHHHHcccCCcEEEEEEeccCCCCC---------chHHHHHHHHH-hhh--hcCccCCCCHHHHH
Q 019861 240 AIHCWSSPST---GVAEISRVLRPGGVFVGTTYIVDGPFN---------LIPFSRLLRQN-MMQ--ISGSYTFLSEREIE 304 (334)
Q Consensus 240 vl~h~~d~~~---~L~~i~r~LkpgG~lii~~~~~~~~~~---------~~~~~~~~~~~-~~~--~~~~~~~~t~~~l~ 304 (334)
+++|++++.. +++++.++|+|||++++.+........ ..+........ +.. ......+++.+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 9999999975 799999999999999998866532110 00100011111 111 11233568999999
Q ss_pred HHHHhCCCcEEEEe--ecCcEEEEEEEcCC
Q 019861 305 DLCRACGLVDFKCT--RNRGFVMFTATKPS 332 (334)
Q Consensus 305 ~ll~~~Gf~~v~~~--~~g~~~~~~a~K~~ 332 (334)
++++++||++++.. ..+.+..++++||.
T Consensus 276 ~~l~~aGF~~v~~~~~~~~~~~~v~a~Kpa 305 (305)
T 3ocj_A 276 AQLEEAGFTDLRFEDDRARLFPTVIARKPA 305 (305)
T ss_dssp HHHHHTTCEEEEEECCTTSSSCEEEEECCC
T ss_pred HHHHHCCCEEEEEEcccCceeeEEEEecCC
Confidence 99999999998876 44567788889873
No 29
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.79 E-value=8e-19 Score=151.68 Aligned_cols=146 Identities=15% Similarity=0.090 Sum_probs=105.4
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------------CC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------------NF 227 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------------~~ 227 (334)
+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+++.+++.+++++.... +.
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 19 NGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 34455555456789999999999999999998866799999999999999998864211 23
Q ss_pred CCCCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHH-
Q 019861 228 PKDSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE- 304 (334)
Q Consensus 228 ~~~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~- 304 (334)
++++||+|++..+++|++++ ..+|+++.++|+|||++++. ++.. .................|...++.+++.
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 173 (217)
T 3jwh_A 99 RFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT-PNIE----YNVKFANLPAGKLRHKDHRFEWTRSQFQN 173 (217)
T ss_dssp GGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE-EBHH----HHHHTC-----------CCSCBCHHHHHH
T ss_pred cCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc-cCcc----cchhhcccccccccccccccccCHHHHHH
Confidence 34789999999999999977 79999999999999955554 4321 0000000111111223466778999999
Q ss_pred ---HHHHhCCCcEEEE
Q 019861 305 ---DLCRACGLVDFKC 317 (334)
Q Consensus 305 ---~ll~~~Gf~~v~~ 317 (334)
++++++||++...
T Consensus 174 ~~~~~~~~~Gf~v~~~ 189 (217)
T 3jwh_A 174 WANKITERFAYNVQFQ 189 (217)
T ss_dssp HHHHHHHHSSEEEEEC
T ss_pred HHHHHHHHcCceEEEE
Confidence 9999999987653
No 30
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.78 E-value=5.1e-18 Score=152.90 Aligned_cols=153 Identities=18% Similarity=0.146 Sum_probs=114.1
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCc
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSI 232 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~f 232 (334)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++..... .++ ++|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~f 130 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD-EPV 130 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC-CCC
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC-CCe
Confidence 3455666666778899999999999999998543 2399999999999999998865321 234 789
Q ss_pred eEEEeCccccCC--CCHHHHHHHHHHcccCCcEEEEEEeccCCCCC-------chHHHHHHHHHhhh-hcCccCCCCHHH
Q 019861 233 DAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFN-------LIPFSRLLRQNMMQ-ISGSYTFLSERE 302 (334)
Q Consensus 233 D~V~~~~vl~h~--~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~t~~~ 302 (334)
|+|++..+++|+ .++..+|+++.++|||||++++.+++...... .............. ...+..+++.++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 210 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPM 210 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHH
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHH
Confidence 999999999999 67899999999999999999999988643211 00000111111111 122446679999
Q ss_pred HHHHHHhCCCcEEEEeec
Q 019861 303 IEDLCRACGLVDFKCTRN 320 (334)
Q Consensus 303 l~~ll~~~Gf~~v~~~~~ 320 (334)
+.++++++||++++....
T Consensus 211 ~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 211 VQECASANGFTVTRVQSL 228 (287)
T ss_dssp HHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHhCCcEEEEEEeC
Confidence 999999999999886543
No 31
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.78 E-value=4.6e-19 Score=158.09 Aligned_cols=147 Identities=17% Similarity=0.250 Sum_probs=108.3
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------------------------
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------------------------- 224 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------------------------- 224 (334)
...++.+|||||||+|.+...++..+. .+|+|+|+|+.|++.|++.+...
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 445678999999999988777766653 37999999999999988654211
Q ss_pred ----------------CCC---CCCCceEEEeCccccCC----CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHH
Q 019861 225 ----------------SNF---PKDSIDAVHAGAAIHCW----SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 281 (334)
Q Consensus 225 ----------------~~~---~~~~fD~V~~~~vl~h~----~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~ 281 (334)
.++ ..++||+|++..+|||+ ++...+|++++++|||||++++.+........
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~----- 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM----- 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE-----
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce-----
Confidence 122 25789999999999986 34468999999999999999998765432100
Q ss_pred HHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeec-----------CcEEEEEEEcCC
Q 019861 282 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-----------RGFVMFTATKPS 332 (334)
Q Consensus 282 ~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~-----------g~~~~~~a~K~~ 332 (334)
..........++.+++.++|+++||++++.... ..+++++++|++
T Consensus 206 ------~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 206 ------VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKP 261 (263)
T ss_dssp ------ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC
T ss_pred ------eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecC
Confidence 000001223679999999999999998886542 256788888875
No 32
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.78 E-value=3.3e-18 Score=147.37 Aligned_cols=152 Identities=18% Similarity=0.140 Sum_probs=110.1
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEeCccccCCC
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHAGAAIHCWS 245 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~~~vl~h~~ 245 (334)
..++.+|||||||+|.++..+++.+. +++|+|+++.+++.+++.-... ..+++++||+|++..+++|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~ 121 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVP 121 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCC
Confidence 44567999999999999999999865 9999999999999998721000 124678999999999999999
Q ss_pred CH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHH-HHHHhhh---hcC----ccCCCCHHHHHHHHHhCCCcEE
Q 019861 246 SP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL-LRQNMMQ---ISG----SYTFLSEREIEDLCRACGLVDF 315 (334)
Q Consensus 246 d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~-~~~~~~~---~~~----~~~~~t~~~l~~ll~~~Gf~~v 315 (334)
++ ..+|+++.++|+|||.+++.+++..... ....... ....... ... +..+++.+++.++++++||++.
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 200 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERR-LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCS 200 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccc-cchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEE
Confidence 87 7899999999999999999998863211 1111000 0000000 011 2347899999999999999977
Q ss_pred EEeecCcEEEEEEE
Q 019861 316 KCTRNRGFVMFTAT 329 (334)
Q Consensus 316 ~~~~~g~~~~~~a~ 329 (334)
.....+.++..+++
T Consensus 201 ~~~~~~~~~~~~~~ 214 (218)
T 3ou2_A 201 VDEVHPGFLYATCR 214 (218)
T ss_dssp EEEEETTEEEEEEE
T ss_pred eeeccccceEeecC
Confidence 66666655555544
No 33
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.78 E-value=4.3e-18 Score=148.26 Aligned_cols=138 Identities=19% Similarity=0.247 Sum_probs=108.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------------CCCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------------NFPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------------~~~~~~fD~V~~ 237 (334)
++.+|||+|||+|.++..++..+. +++|+|+++.+++.++++..... ++++++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 478999999999999999999865 99999999999999998764311 355789999999
Q ss_pred CccccCCCCHH---HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhh----------------cCccCCC
Q 019861 238 GAAIHCWSSPS---TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI----------------SGSYTFL 298 (334)
Q Consensus 238 ~~vl~h~~d~~---~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~ 298 (334)
..+++|++++. .+|+++.++|+|||++++.++....... .+.......+... ..+.+++
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK--LYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHF 185 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH--HHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECB
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH--HHHHHhhhhccchhhhcceEecccccCCcceeeEeC
Confidence 99999999998 8999999999999999999987643211 1111111111110 1134678
Q ss_pred CHHHHHHHHHhCCCcEEEEe
Q 019861 299 SEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 299 t~~~l~~ll~~~Gf~~v~~~ 318 (334)
+.+++.++++++||++++..
T Consensus 186 ~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 186 TEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp CHHHHHHHHHTTTEEEEEEE
T ss_pred CHHHHHHHHHHcCCEEEEEE
Confidence 99999999999999998844
No 34
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.78 E-value=6.5e-18 Score=148.14 Aligned_cols=153 Identities=14% Similarity=0.140 Sum_probs=112.9
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCc-ccc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGA-AIH 242 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~-vl~ 242 (334)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++..... +++ ++||+|++.. +++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~ 113 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTN 113 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCcccc
Confidence 578999999999999999999875 99999999999999998765321 233 7899999998 999
Q ss_pred CC---CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHH---------HHHHHHh----------------------
Q 019861 243 CW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS---------RLLRQNM---------------------- 288 (334)
Q Consensus 243 h~---~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~---------~~~~~~~---------------------- 288 (334)
|+ .++..+|++++++|+|||++++..++........+.. ...+...
T Consensus 114 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (246)
T 1y8c_A 114 YIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKR 193 (246)
T ss_dssp GCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccc
Confidence 99 4567899999999999999999877642100000000 0000000
Q ss_pred hhhcCccCCCCHHHHHHHHHhCCCcEEEEeec---------CcEEEEEEEcCC
Q 019861 289 MQISGSYTFLSEREIEDLCRACGLVDFKCTRN---------RGFVMFTATKPS 332 (334)
Q Consensus 289 ~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~---------g~~~~~~a~K~~ 332 (334)
.....+.++++.+++.++|+++||++++.... ....+++++|+.
T Consensus 194 ~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~~ 246 (246)
T 1y8c_A 194 FDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLGG 246 (246)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEECC
T ss_pred cEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEecC
Confidence 00012357889999999999999999886532 356788898873
No 35
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.78 E-value=2.3e-18 Score=148.87 Aligned_cols=160 Identities=16% Similarity=0.108 Sum_probs=114.1
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------------CCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------------SNF 227 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------------~~~ 227 (334)
+.+.+.+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++... .++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK 98 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc
Confidence 3444444445678999999999999999999886679999999999999999876421 123
Q ss_pred CCCCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHH-
Q 019861 228 PKDSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE- 304 (334)
Q Consensus 228 ~~~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~- 304 (334)
++++||+|++..+++|++++ ..+|+++.++|+|||. ++.+++......... . .........|...++.+++.
T Consensus 99 ~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~-~i~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~l~~ 173 (219)
T 3jwg_A 99 RFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTV-IVSTPNKEYNFHYGN-L---FEGNLRHRDHRFEWTRKEFQT 173 (219)
T ss_dssp GGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEE-EEEEEBGGGGGCCCC-T--------GGGCCTTSBCHHHHHH
T ss_pred ccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEE-EEEccchhhhhhhcc-c---CcccccccCceeeecHHHHHH
Confidence 45789999999999999977 6899999999999994 455555422101000 0 01111224466778999999
Q ss_pred ---HHHHhCCCcEEEEe-------ecCcEEEEEEEcC
Q 019861 305 ---DLCRACGLVDFKCT-------RNRGFVMFTATKP 331 (334)
Q Consensus 305 ---~ll~~~Gf~~v~~~-------~~g~~~~~~a~K~ 331 (334)
++++++||++.... .+....+.+.+|.
T Consensus 174 ~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 174 WAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp HHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEEC
T ss_pred HHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEecc
Confidence 88999999876542 2234566666664
No 36
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=3.6e-18 Score=151.26 Aligned_cols=146 Identities=11% Similarity=0.026 Sum_probs=109.7
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEeC
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHAG 238 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~~ 238 (334)
.+...+...++.+|||||||+|.++..+++..+..+++|+|+++.+++.++++.... .+ ++++||+|++.
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~ 102 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYAN 102 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEe
Confidence 455556666788999999999999999999855569999999999999999873211 12 56789999999
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHH--hhhh-----cCccCCCCHHHHHHHHHhCC
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN--MMQI-----SGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~t~~~l~~ll~~~G 311 (334)
.+++|++++..+|++++++|+|||++++.+++.... .....+...... +... ..+..+++.+++.++|+++|
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 181 (259)
T 2p35_A 103 AVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE-PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKS 181 (259)
T ss_dssp SCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS-HHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGE
T ss_pred CchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc-HHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcC
Confidence 999999999999999999999999999999864321 111111111111 1110 22567899999999999999
Q ss_pred CcEE
Q 019861 312 LVDF 315 (334)
Q Consensus 312 f~~v 315 (334)
|++.
T Consensus 182 f~v~ 185 (259)
T 2p35_A 182 SRVD 185 (259)
T ss_dssp EEEE
T ss_pred CceE
Confidence 9743
No 37
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.78 E-value=6e-18 Score=153.71 Aligned_cols=154 Identities=14% Similarity=0.094 Sum_probs=116.0
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCc
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSI 232 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~f 232 (334)
.+.+...+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.++++..... .+ +++|
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~f 138 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEPV 138 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCCC
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCCc
Confidence 34566666777788999999999999999998832 599999999999999998865422 23 6899
Q ss_pred eEEEeCccccCCCCH---------HHHHHHHHHcccCCcEEEEEEeccCCCCCchH-------HHHHHHHHhhh-hcCcc
Q 019861 233 DAVHAGAAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIP-------FSRLLRQNMMQ-ISGSY 295 (334)
Q Consensus 233 D~V~~~~vl~h~~d~---------~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~-------~~~~~~~~~~~-~~~~~ 295 (334)
|+|++..+++|++|| ..+++++.++|||||++++.++.......... ....+..++.. .....
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 218 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGG 218 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCC
Confidence 999999999999887 79999999999999999999987653210000 00000111111 12234
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEeecC
Q 019861 296 TFLSEREIEDLCRACGLVDFKCTRNR 321 (334)
Q Consensus 296 ~~~t~~~l~~ll~~~Gf~~v~~~~~g 321 (334)
...+.+++.++++++||++++....+
T Consensus 219 ~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 219 RLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 67789999999999999998876554
No 38
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.77 E-value=1.9e-18 Score=154.22 Aligned_cols=168 Identities=21% Similarity=0.320 Sum_probs=115.9
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcccccccCCCCC--cCcccccchhhccCchhHHHHHH
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASGSKD--YGELMSPATEFFRMPFMSFIYER 148 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--y~~~~~~~~~~~~~~~~~~~~~~ 148 (334)
.+.||.|+..+.... ..++|.+|+.+.....+|++++....... ....... +.
T Consensus 2 ~~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~~~~~~~-------------~~- 56 (269)
T 1p91_A 2 SFSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAEM-------------MQ- 56 (269)
T ss_dssp CBBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCCCSSSHHH-------------HH-
T ss_pred cccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCCCCCCHHH-------------HH-
Confidence 378999998765533 57999999999988999998876533211 1111000 00
Q ss_pred hHHHhhHhcCCCCc--HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---
Q 019861 149 GWRQNFVWGGFPGP--EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--- 223 (334)
Q Consensus 149 ~w~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--- 223 (334)
.+..+...++..+ ....+.+...+. .++.+|||||||+|.++..+++..+..+++|+|+++.+++.++++...
T Consensus 57 -~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 134 (269)
T 1p91_A 57 -ARRAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTF 134 (269)
T ss_dssp -HHHHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEE
T ss_pred -HHHHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEE
Confidence 0111222222211 122333444332 357899999999999999999985456999999999999999987532
Q ss_pred ------CCCCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 224 ------ESNFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 224 ------~~~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
..++++++||+|++..+.. +++++.++|+|||++++.+++.+
T Consensus 135 ~~~d~~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 135 CVASSHRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp EECCTTSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred EEcchhhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 1245678999999977633 48999999999999999998864
No 39
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.77 E-value=4.4e-18 Score=149.20 Aligned_cols=151 Identities=24% Similarity=0.274 Sum_probs=111.1
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------CCCCCCCceEEE
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----------SNFPKDSIDAVH 236 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----------~~~~~~~fD~V~ 236 (334)
.+...+...++.+|||||||+|.++..+++.+. .+++|+|+++.+++.++++.... .++++++||+|+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEE
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEE
Confidence 455566666788999999999999999998853 48999999999999999875421 245678999999
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCch-------------HHHHHH-----HHHhhhhcCccCCC
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-------------PFSRLL-----RQNMMQISGSYTFL 298 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~-------------~~~~~~-----~~~~~~~~~~~~~~ 298 (334)
+..+++|++++..+|++++++|+|||++++.+++........ +..... ...+.....+...+
T Consensus 113 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (243)
T 3bkw_A 113 SSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHR 192 (243)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEEC
T ss_pred EeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEec
Confidence 999999999999999999999999999999887531000000 000000 00000011233447
Q ss_pred CHHHHHHHHHhCCCcEEEEee
Q 019861 299 SEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 299 t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
+.+++.++|+++||++++...
T Consensus 193 t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 193 TVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp CHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHHcCCEeeeecc
Confidence 999999999999999988553
No 40
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.77 E-value=2e-17 Score=154.61 Aligned_cols=159 Identities=11% Similarity=0.090 Sum_probs=122.7
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSI 232 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~f 232 (334)
..+...++..+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++++.... +++. .|
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~ 269 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GA 269 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SC
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-Cc
Confidence 3455555555678999999999999999999988889999999 999999998764321 3344 79
Q ss_pred eEEEeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 233 DAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
|+|++.++|||++++. .+|++++++|+|||++++.++..+.... +........+.. ..+...++.++|.++++++
T Consensus 270 D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~d~~~~~-~~~g~~~t~~e~~~ll~~a 346 (369)
T 3gwz_A 270 DVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPA--ASTLFVDLLLLV-LVGGAERSESEFAALLEKS 346 (369)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCC--HHHHHHHHHHHH-HHSCCCBCHHHHHHHHHTT
T ss_pred eEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC--CchhHhhHHHHh-hcCCccCCHHHHHHHHHHC
Confidence 9999999999999886 7999999999999999999988754322 111111111111 1245678999999999999
Q ss_pred CCcEEEEee--cCcEEEEEEEc
Q 019861 311 GLVDFKCTR--NRGFVMFTATK 330 (334)
Q Consensus 311 Gf~~v~~~~--~g~~~~~~a~K 330 (334)
||++++... .+.+.++.++|
T Consensus 347 Gf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 347 GLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp TEEEEEEEECSSSSEEEEEEEE
T ss_pred CCeEEEEEECCCCCcEEEEEEe
Confidence 999999776 56777777765
No 41
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.76 E-value=3e-18 Score=151.36 Aligned_cols=140 Identities=14% Similarity=0.087 Sum_probs=110.3
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------------CCCCCCCceEE
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------------SNFPKDSIDAV 235 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------------~~~~~~~fD~V 235 (334)
.+...+...++.+|||||||+|.++..++..+ ..+++|+|+++.+++.++++.... .++++++||+|
T Consensus 84 ~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v 162 (254)
T 1xtp_A 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLI 162 (254)
T ss_dssp HHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEE
T ss_pred HHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEE
Confidence 34445555568899999999999999998886 458999999999999999886421 24567899999
Q ss_pred EeCccccCCC--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 236 HAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 236 ~~~~vl~h~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
++..+++|++ ++..+|+++.++|+|||++++.++........ .....+..+++.+++.++++++||+
T Consensus 163 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~aGf~ 231 (254)
T 1xtp_A 163 VIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL-----------VDKEDSSLTRSDIHYKRLFNESGVR 231 (254)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE-----------EETTTTEEEBCHHHHHHHHHHHTCC
T ss_pred EEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce-----------ecccCCcccCCHHHHHHHHHHCCCE
Confidence 9999999995 47899999999999999999999754322110 1112244567999999999999999
Q ss_pred EEEEee
Q 019861 314 DFKCTR 319 (334)
Q Consensus 314 ~v~~~~ 319 (334)
+++...
T Consensus 232 ~~~~~~ 237 (254)
T 1xtp_A 232 VVKEAF 237 (254)
T ss_dssp EEEEEE
T ss_pred EEEeee
Confidence 988654
No 42
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=1.8e-17 Score=143.43 Aligned_cols=143 Identities=22% Similarity=0.311 Sum_probs=110.8
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-------cCCCCCCCCceEEEeCccccCCCCHHHH
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------QESNFPKDSIDAVHAGAAIHCWSSPSTG 250 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-------~~~~~~~~~fD~V~~~~vl~h~~d~~~~ 250 (334)
+.+|||||||+|.++..++.. +|+|+++.+++.++++-. ...++++++||+|++..+++|++++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 121 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERA 121 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHTTCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhcCCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHH
Confidence 689999999999999888754 999999999999987510 1124567899999999999999999999
Q ss_pred HHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHh--hhhcCccCCCCHHHHHHHHHhCCCcEEEEeec--------
Q 019861 251 VAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM--MQISGSYTFLSEREIEDLCRACGLVDFKCTRN-------- 320 (334)
Q Consensus 251 L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~-------- 320 (334)
|+++.++|+|||.+++.+++... .+........ .....+.++++.+++.++++++||++++....
T Consensus 122 l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~p~~~ 196 (219)
T 1vlm_A 122 LKEAYRILKKGGYLIVGIVDRES-----FLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLFKHPSEL 196 (219)
T ss_dssp HHHHHHHEEEEEEEEEEEECSSS-----HHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEECCSCGGGC
T ss_pred HHHHHHHcCCCcEEEEEEeCCcc-----HHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecccCCCCCcc
Confidence 99999999999999999987642 2211111110 11224567899999999999999998874422
Q ss_pred ------------CcEEEEEEEcC
Q 019861 321 ------------RGFVMFTATKP 331 (334)
Q Consensus 321 ------------g~~~~~~a~K~ 331 (334)
+.+++++|+|+
T Consensus 197 ~~~~~~~~~~~~~~~~~i~a~K~ 219 (219)
T 1vlm_A 197 SEIEPVKEGYGEGAFVVIRGTKK 219 (219)
T ss_dssp SSCCCCEESSSSSSEEEEEEECC
T ss_pred ccchhhhcCCCCCeEEEEEecCC
Confidence 14888888874
No 43
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.76 E-value=2.6e-17 Score=153.21 Aligned_cols=162 Identities=17% Similarity=0.141 Sum_probs=121.3
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCce
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSID 233 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD 233 (334)
+.+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++.... ..+-..+|
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D 258 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEAD 258 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCCS
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCCC
Confidence 3455555556678999999999999999999987789999999 999999998754321 11223349
Q ss_pred EEEeCccccCCCC--HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhh---hcCccCCCCHHHHHHHHH
Q 019861 234 AVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ---ISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 234 ~V~~~~vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~t~~~l~~ll~ 308 (334)
+|++..++||+++ ...+|++++++|+|||++++.++..+.. ..+........+.. ......+++.++|.++++
T Consensus 259 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 259 AVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP--ENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT--TSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred EEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC--CCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHH
Confidence 9999999999998 6789999999999999999988776433 11222222111111 111234589999999999
Q ss_pred hCCCcEEEEeecCcEEEEEEEcC
Q 019861 309 ACGLVDFKCTRNRGFVMFTATKP 331 (334)
Q Consensus 309 ~~Gf~~v~~~~~g~~~~~~a~K~ 331 (334)
++||++++....+...++.++||
T Consensus 337 ~aGf~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 337 SLGYKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp HHTCEEEEEEEETTEEEEEEECC
T ss_pred HCCCceEEEEecCCceEEEEeCC
Confidence 99999988765557788888886
No 44
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.76 E-value=2e-17 Score=149.07 Aligned_cols=147 Identities=16% Similarity=0.144 Sum_probs=109.8
Q ss_pred cCCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeC
Q 019861 173 LKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAG 238 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~ 238 (334)
....++.+|||||||+|.++..+++..+ ..+++|+|+++.+++.++++..... ++ +++||+|++.
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~ 96 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIEL-NDKYDIAICH 96 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCC-SSCEEEEEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCc-CCCeeEEEEC
Confidence 3455688999999999999999999865 3699999999999999998865422 23 4689999999
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEEecc-----CCC--CCchH-H--HHHHHHHhh--hhcCccCCCCHHHHHHH
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV-----DGP--FNLIP-F--SRLLRQNMM--QISGSYTFLSEREIEDL 306 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~-----~~~--~~~~~-~--~~~~~~~~~--~~~~~~~~~t~~~l~~l 306 (334)
.+++|++++..+|++++++|+|||++++.+++. ... ....+ . ...+...+. .......+.+.+++.++
T Consensus 97 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (284)
T 3gu3_A 97 AFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIY 176 (284)
T ss_dssp SCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHH
T ss_pred ChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHH
Confidence 999999999999999999999999999999872 100 00000 0 111111111 11223456677899999
Q ss_pred HHhCCCcEEEEeec
Q 019861 307 CRACGLVDFKCTRN 320 (334)
Q Consensus 307 l~~~Gf~~v~~~~~ 320 (334)
|+++||++++....
T Consensus 177 l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 177 LSELGVKNIECRVS 190 (284)
T ss_dssp HHHTTCEEEEEEEC
T ss_pred HHHcCCCeEEEEEc
Confidence 99999999876443
No 45
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.76 E-value=1.6e-18 Score=150.30 Aligned_cols=146 Identities=16% Similarity=0.222 Sum_probs=112.1
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---------CCCCCCCCceEEEeC
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---------ESNFPKDSIDAVHAG 238 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---------~~~~~~~~fD~V~~~ 238 (334)
.+.+.+. .++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++... ..++++++||+|++.
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEKLDHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTTSSEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhCCcEEEcchhhcCCCCCCCccCEEEEC
Confidence 3445554 467899999999999999999885 5999999999999999876421 134567899999999
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhh------hhcCccCCCCHHHHHHHHHhCCC
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM------QISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
.+++|++++..+|+++.++|+|||.+++.+++.... ..........+. ....|.++++.+++.++++++||
T Consensus 101 ~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 101 DVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI---SVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp SCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH---HHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTE
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH---HHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCC
Confidence 999999999999999999999999999999886431 111111100000 01235678999999999999999
Q ss_pred cEEEEee
Q 019861 313 VDFKCTR 319 (334)
Q Consensus 313 ~~v~~~~ 319 (334)
++++...
T Consensus 178 ~~~~~~~ 184 (230)
T 3cc8_A 178 SISKVDR 184 (230)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9887543
No 46
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.76 E-value=4.6e-18 Score=151.22 Aligned_cols=161 Identities=19% Similarity=0.197 Sum_probs=113.8
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEe
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHA 237 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~ 237 (334)
+.+...++ ++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++.... .++ +++||+|++
T Consensus 42 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 42 ALVRRHSP--KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp HHHHHHCT--TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEE
T ss_pred HHHHhhCC--CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEE
Confidence 34444433 368999999999999999999876 9999999999999999875421 122 688999999
Q ss_pred Cc-cccCCC---CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHH-----------HHHHHH------------H---
Q 019861 238 GA-AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-----------SRLLRQ------------N--- 287 (334)
Q Consensus 238 ~~-vl~h~~---d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~-----------~~~~~~------------~--- 287 (334)
.. +++|++ +...+|++++++|+|||++++.+............ ...++. .
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLV 196 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEE
Confidence 98 999997 44588999999999999999975433211000000 000000 0
Q ss_pred ------hh--hhcCccCCCCHHHHHHHHHhCCCcEEEEee-cCcEEEEEEEcCC
Q 019861 288 ------MM--QISGSYTFLSEREIEDLCRACGLVDFKCTR-NRGFVMFTATKPS 332 (334)
Q Consensus 288 ------~~--~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~-~g~~~~~~a~K~~ 332 (334)
+. ....+.++|+.+++.++|+++||++++... .+...+++++||.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a 250 (263)
T 3pfg_A 197 AGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGA 250 (263)
T ss_dssp EETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC
T ss_pred ecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCC
Confidence 00 001135688999999999999999988643 2445678888874
No 47
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.76 E-value=2.7e-18 Score=152.80 Aligned_cols=146 Identities=22% Similarity=0.255 Sum_probs=111.3
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh--------cCCCCCCCCceEEE
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ--------QESNFPKDSIDAVH 236 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~--------~~~~~~~~~fD~V~ 236 (334)
..+.+.+.+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++.. ...++++++||+|+
T Consensus 22 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~ 99 (261)
T 3ege_A 22 IVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVI 99 (261)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEE
T ss_pred HHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEE
Confidence 44566666766678999999999999999999855 499999999999987765431 11256788999999
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCch--HHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
+.++++|++++..+|++++++|| ||++++.++......... ........ ..+..+.+.+++. +|+++||++
T Consensus 100 ~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~l~~aGF~~ 172 (261)
T 3ege_A 100 SILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWE-----DALRFLPLDEQIN-LLQENTKRR 172 (261)
T ss_dssp EESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHH-----HHHTSCCHHHHHH-HHHHHHCSE
T ss_pred EcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhh-----hhhhhCCCHHHHH-HHHHcCCCc
Confidence 99999999999999999999999 999999888754332111 11111111 1245677888999 999999988
Q ss_pred EEEee
Q 019861 315 FKCTR 319 (334)
Q Consensus 315 v~~~~ 319 (334)
++...
T Consensus 173 v~~~~ 177 (261)
T 3ege_A 173 VEAIP 177 (261)
T ss_dssp EEEEE
T ss_pred eeEEE
Confidence 87543
No 48
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.76 E-value=2.9e-17 Score=148.27 Aligned_cols=108 Identities=22% Similarity=0.325 Sum_probs=91.2
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------C---
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------S--- 225 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------~--- 225 (334)
.....+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++.... .
T Consensus 42 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 42 TAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 344556666666555678999999999999999999976 9999999999999998764211 0
Q ss_pred --C---CCCCCceEEEeC-ccccCCCC-------HHHHHHHHHHcccCCcEEEEEEecc
Q 019861 226 --N---FPKDSIDAVHAG-AAIHCWSS-------PSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 226 --~---~~~~~fD~V~~~-~vl~h~~d-------~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+ +++++||+|++. .+++|+++ +..+|++++++|+|||++++..++.
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 2 567899999998 89999999 8999999999999999999998875
No 49
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.76 E-value=2.5e-17 Score=151.60 Aligned_cols=162 Identities=14% Similarity=0.145 Sum_probs=118.6
Q ss_pred HHHcccCC--CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CCCCCC
Q 019861 168 LMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFPKD 230 (334)
Q Consensus 168 ~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~~ 230 (334)
.+...+.. .++.+|||||||+|.++..+++..+..+++++|++ .+++.+++++... .++++
T Consensus 154 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~- 231 (335)
T 2r3s_A 154 LIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGN- 231 (335)
T ss_dssp HHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCS-
T ss_pred HHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCC-
Confidence 44444444 56789999999999999999999777799999999 9999999875321 12333
Q ss_pred CceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHH
Q 019861 231 SIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 308 (334)
.||+|++.+++||++++ ..+|++++++|+|||++++.++..............+.........+...++.+++.++++
T Consensus 232 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~ 311 (335)
T 2r3s_A 232 DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFS 311 (335)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHH
T ss_pred CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHH
Confidence 49999999999999766 6899999999999999999998765432211111112222222223567889999999999
Q ss_pred hCCCcEEEEeec-CcEEEEEEEcC
Q 019861 309 ACGLVDFKCTRN-RGFVMFTATKP 331 (334)
Q Consensus 309 ~~Gf~~v~~~~~-g~~~~~~a~K~ 331 (334)
++||++++.... +...++.+++|
T Consensus 312 ~aGf~~~~~~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 312 NAGFSHSQLHSLPTTQQQVIVAYK 335 (335)
T ss_dssp HTTCSEEEEECCTTSSSEEEEEEC
T ss_pred HCCCCeeeEEECCCCceeEEEecC
Confidence 999999986543 34455555543
No 50
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.75 E-value=2.3e-17 Score=151.95 Aligned_cols=153 Identities=14% Similarity=0.064 Sum_probs=115.8
Q ss_pred cccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCceEEE
Q 019861 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSIDAVH 236 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD~V~ 236 (334)
..+...+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++++.... +++. .||+|+
T Consensus 163 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~~D~v~ 240 (332)
T 3i53_A 163 AKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-GAGGYV 240 (332)
T ss_dssp GSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-SCSEEE
T ss_pred HhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-CCcEEE
Confidence 334444567999999999999999999988889999999 999999998754321 2333 799999
Q ss_pred eCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 237 AGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 237 ~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
+.++|||++++ ..+|++++++|+|||++++.++..+.. ....... ..... ..+...++.++|.++++++||++
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d---~~~~~-~~~~~~~t~~e~~~ll~~aGf~~ 315 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMD---LRMLT-YFGGKERSLAELGELAAQAGLAV 315 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHH---HHHHH-HHSCCCCCHHHHHHHHHHTTEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHH---HHHHh-hCCCCCCCHHHHHHHHHHCCCEE
Confidence 99999999987 789999999999999999998876543 1111111 11111 12446789999999999999999
Q ss_pred EEEeecCcEEEEEEEc
Q 019861 315 FKCTRNRGFVMFTATK 330 (334)
Q Consensus 315 v~~~~~g~~~~~~a~K 330 (334)
++....+.+.++.++|
T Consensus 316 ~~~~~~~~~~vie~r~ 331 (332)
T 3i53_A 316 RAAHPISYVSIVEMTA 331 (332)
T ss_dssp EEEEECSSSEEEEEEE
T ss_pred EEEEECCCcEEEEEee
Confidence 9876554466666654
No 51
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.75 E-value=1.2e-17 Score=146.14 Aligned_cols=124 Identities=18% Similarity=0.229 Sum_probs=102.8
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCceEEEeCccccC
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSIDAVHAGAAIHC 243 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD~V~~~~vl~h 243 (334)
+.+|||||||+|.++..++..+. +|+|+|+++.+++.++++..... ..++++||+|++..+++|
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 45999999999999999988654 99999999999999999875421 124568999999999999
Q ss_pred CC--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 244 WS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 244 ~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
++ ++..+|+++.++|+|||++++......... .+....++.+++.++++++||++++...
T Consensus 145 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLKPDGELITLMYPITDHV----------------GGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp SCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC----------------SCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEEEEecccccC----------------CCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 99 888999999999999999999887654221 1233457999999999999999988553
No 52
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.75 E-value=8.7e-18 Score=145.40 Aligned_cols=160 Identities=14% Similarity=0.120 Sum_probs=114.3
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------CC-CCCCCceEE
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----------SN-FPKDSIDAV 235 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----------~~-~~~~~fD~V 235 (334)
.+...+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.... .+ .++.+||+|
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEE
Confidence 344444444568999999999999999999865 9999999999999999861110 12 234569999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHH----HHHhhh--hcCccCCCCHHHHHHHHHh
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLL----RQNMMQ--ISGSYTFLSEREIEDLCRA 309 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~t~~~l~~ll~~ 309 (334)
++..+++ ..++..+|++++++|+|||++++.+++....... .+...+ +..+.. ...+..+++.+++.++|++
T Consensus 121 ~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (227)
T 3e8s_A 121 CANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDM 198 (227)
T ss_dssp EEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHH
T ss_pred EECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEecHHHHHHHHHH
Confidence 9999999 7899999999999999999999999876432111 000000 000000 0123456799999999999
Q ss_pred CCCcEEEEeec-------CcEEEEEEEcC
Q 019861 310 CGLVDFKCTRN-------RGFVMFTATKP 331 (334)
Q Consensus 310 ~Gf~~v~~~~~-------g~~~~~~a~K~ 331 (334)
+||++++.... ....+++++||
T Consensus 199 aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 199 AGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp TTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred cCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 99999886541 12566667764
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.75 E-value=2e-17 Score=146.71 Aligned_cols=141 Identities=18% Similarity=0.166 Sum_probs=105.8
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-------------CCCCCCCCceEEEeCcc
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------------ESNFPKDSIDAVHAGAA 240 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-------------~~~~~~~~fD~V~~~~v 240 (334)
...++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++... ..++++++||+|++..+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL 113 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence 345678999999999999999998864 999999999999999988521 11456789999999999
Q ss_pred ccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhh----cCccCCCCHHHHHHHHHhCCCcEEE
Q 019861 241 IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI----SGSYTFLSEREIEDLCRACGLVDFK 316 (334)
Q Consensus 241 l~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~t~~~l~~ll~~~Gf~~v~ 316 (334)
++|++++..+++++.++|+|||++++.....+ ......+...+....... ..+..+++.+++.++++++||+++.
T Consensus 114 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 192 (263)
T 2yqz_A 114 WHLVPDWPKVLAEAIRVLKPGGALLEGWDQAE-ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRT 192 (263)
T ss_dssp GGGCTTHHHHHHHHHHHEEEEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEE
T ss_pred hhhcCCHHHHHHHHHHHCCCCcEEEEEecCCC-ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcce
Confidence 99999999999999999999999998833321 111111222222211111 1144567899999999999999766
Q ss_pred E
Q 019861 317 C 317 (334)
Q Consensus 317 ~ 317 (334)
.
T Consensus 193 ~ 193 (263)
T 2yqz_A 193 R 193 (263)
T ss_dssp E
T ss_pred E
Confidence 4
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.75 E-value=8.9e-18 Score=147.52 Aligned_cols=130 Identities=18% Similarity=0.165 Sum_probs=105.5
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCCceEEEeCcccc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~fD~V~~~~vl~ 242 (334)
++.+|||||||+|.++..++..+ ..+++|+|+++.+++.++++.... .++++++||+|++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 57899999999999999998876 469999999999999999886542 135567899999999999
Q ss_pred CCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 243 CWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 243 h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
|++++. .+|+++.++|+|||++++.++..... . .+ ....+...++.+++.++++++||++++...
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~-------~~-~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG----V-------IL-DDVDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS----E-------EE-ETTTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc----c-------ee-cccCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 999865 89999999999999999999876431 0 00 111233345899999999999999988653
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.75 E-value=2.5e-17 Score=150.67 Aligned_cols=151 Identities=14% Similarity=0.190 Sum_probs=113.5
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDS 231 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~ 231 (334)
.+.+.+.+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.++++..... .++ ++
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~ 155 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-EP 155 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-CC
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-CC
Confidence 345666667677889999999999999999987 54 99999999999999998865421 123 78
Q ss_pred ceEEEeCccccCC--CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCc----hHH---HHHHHHHhhh-hcCccCCCCHH
Q 019861 232 IDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL----IPF---SRLLRQNMMQ-ISGSYTFLSER 301 (334)
Q Consensus 232 fD~V~~~~vl~h~--~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~----~~~---~~~~~~~~~~-~~~~~~~~t~~ 301 (334)
||+|++..+++|+ .++..+|+++.++|+|||++++.+++....... .+. .......+.. ......+.+.+
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 235 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTE 235 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHH
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHH
Confidence 9999999999999 578899999999999999999999987532110 000 0001111111 11234567999
Q ss_pred HHHHHHHhCCCcEEEEee
Q 019861 302 EIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 302 ~l~~ll~~~Gf~~v~~~~ 319 (334)
++.++++++||++++...
T Consensus 236 ~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 236 MMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp HHHHHHHHTTCBCCCCEE
T ss_pred HHHHHHHhCCCEEEEEEe
Confidence 999999999999887543
No 56
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.74 E-value=2.5e-17 Score=139.82 Aligned_cols=145 Identities=19% Similarity=0.216 Sum_probs=111.2
Q ss_pred HHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCCceE
Q 019861 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDSIDA 234 (334)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~fD~ 234 (334)
+.+.+...++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.... .++ +++||+
T Consensus 24 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~ 100 (199)
T 2xvm_A 24 VLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDF 100 (199)
T ss_dssp HHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEE
T ss_pred HHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceE
Confidence 33444545678999999999999999999865 9999999999999999875421 133 678999
Q ss_pred EEeCccccCCC--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 235 VHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 235 V~~~~vl~h~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
|++..+++|++ ++..+++++.++|+|||++++.++....... ....+...++.+++.+++++ |
T Consensus 101 v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~-------------~~~~~~~~~~~~~l~~~~~~--f 165 (199)
T 2xvm_A 101 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYP-------------CTVGFPFAFKEGELRRYYEG--W 165 (199)
T ss_dssp EEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-------------CCSCCSCCBCTTHHHHHTTT--S
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC-------------CCCCCCCccCHHHHHHHhcC--C
Confidence 99999999998 7889999999999999998887765432111 01224456799999999987 9
Q ss_pred cEEEEeec---------------CcEEEEEEEcC
Q 019861 313 VDFKCTRN---------------RGFVMFTATKP 331 (334)
Q Consensus 313 ~~v~~~~~---------------g~~~~~~a~K~ 331 (334)
++++.... ..+..++++||
T Consensus 166 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~arK~ 199 (199)
T 2xvm_A 166 ERVKYNEDVGELHRTDANGNRIKLRFATMLARKK 199 (199)
T ss_dssp EEEEEECCEEEEEEECTTSCEEEEEEEEEEEECC
T ss_pred eEEEecccceEEEeecCCCCeeeEEEEEEEEecC
Confidence 88774321 13567788886
No 57
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.74 E-value=3.8e-17 Score=140.33 Aligned_cols=134 Identities=24% Similarity=0.332 Sum_probs=101.3
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---------CCCCCCCCceEEEeC
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---------ESNFPKDSIDAVHAG 238 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---------~~~~~~~~fD~V~~~ 238 (334)
.+...+. ++.+|||||||+|.++..+ + ..+++|+|+++.+++.++++... ..++++++||+|++.
T Consensus 29 ~l~~~~~--~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 102 (211)
T 2gs9_A 29 ALKGLLP--PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLF 102 (211)
T ss_dssp HHHTTCC--CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEE
T ss_pred HHHHhcC--CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEc
Confidence 3444444 5789999999999998887 2 23899999999999999987421 124667899999999
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
++++|++++..+|+++.++|+|||.+++.+++.... .................|.++++.+++.++++ |
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 103 TTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSP--WAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp SCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSH--HHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCc--HHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 999999999999999999999999999999986531 11111111111111234678899999999998 7
No 58
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.74 E-value=1.7e-17 Score=155.90 Aligned_cols=140 Identities=20% Similarity=0.232 Sum_probs=109.1
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhc----------------------CC------
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQ----------------------ES------ 225 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~----------------------~~------ 225 (334)
..++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.+++++.. ..
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3467899999999999999998873 567999999999999999986421 01
Q ss_pred CCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHH
Q 019861 226 NFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 305 (334)
Q Consensus 226 ~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ 305 (334)
++++++||+|++..+++|++++..+|++++++|||||++++.++..+.... .........+ .......++.+++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLS--EAAQQDPILY--GECLGGALYLEDFRR 236 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCC--HHHHHCHHHH--HTTCTTCCBHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccC--HhHhhhHHHh--hcccccCCCHHHHHH
Confidence 566789999999999999999999999999999999999999887653211 1111111111 122346788999999
Q ss_pred HHHhCCCcEEEEe
Q 019861 306 LCRACGLVDFKCT 318 (334)
Q Consensus 306 ll~~~Gf~~v~~~ 318 (334)
+|+++||++++..
T Consensus 237 ll~~aGF~~v~~~ 249 (383)
T 4fsd_A 237 LVAEAGFRDVRLV 249 (383)
T ss_dssp HHHHTTCCCEEEE
T ss_pred HHHHCCCceEEEE
Confidence 9999999877643
No 59
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.74 E-value=8.5e-17 Score=143.82 Aligned_cols=152 Identities=13% Similarity=0.145 Sum_probs=112.7
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHH------HHHHHHHHHhcCC---------------
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSEN------MLKQCYEFVQQES--------------- 225 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~------~~~~a~~~~~~~~--------------- 225 (334)
.+...+...++.+|||||||+|.++..+++. ++..+++|+|+|+. +++.+++++....
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 4455556667889999999999999999988 45579999999997 8999988764211
Q ss_pred ---CCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCc-hHH-HHHHHH-Hh---h--hhcCc
Q 019861 226 ---NFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL-IPF-SRLLRQ-NM---M--QISGS 294 (334)
Q Consensus 226 ---~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~-~~~-~~~~~~-~~---~--~~~~~ 294 (334)
++++++||+|++..+++|++++..+++.+.++++|||++++.+......... ... ...+.. .+ . ....+
T Consensus 114 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (275)
T 3bkx_A 114 DLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANI 193 (275)
T ss_dssp CCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSC
T ss_pred ccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccc
Confidence 1245789999999999999999988888888888899999999877543211 111 111111 11 0 11234
Q ss_pred cCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 295 YTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 295 ~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
..+++.+++.++++++||++++...
T Consensus 194 ~~~~s~~~l~~~l~~aGf~~~~~~~ 218 (275)
T 3bkx_A 194 RTLITPDTLAQIAHDNTWTYTAGTI 218 (275)
T ss_dssp CCCCCHHHHHHHHHHHTCEEEECCC
T ss_pred cccCCHHHHHHHHHHCCCeeEEEEE
Confidence 5689999999999999999987543
No 60
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.74 E-value=1.1e-17 Score=148.58 Aligned_cols=148 Identities=16% Similarity=0.253 Sum_probs=112.8
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------------------------
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------------------------- 224 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------------------------- 224 (334)
...++.+|||||||+|.++..++..+. .+|+|+|+|+.+++.+++++...
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 345678999999999999999888764 58999999999999998765321
Q ss_pred ----------------CCCCC---CCceEEEeCcccc----CCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHH
Q 019861 225 ----------------SNFPK---DSIDAVHAGAAIH----CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 281 (334)
Q Consensus 225 ----------------~~~~~---~~fD~V~~~~vl~----h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~ 281 (334)
.++++ ++||+|++..+++ |+.++..+|+++.++|+|||++++.++........
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~---- 207 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMI---- 207 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE----
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEc----
Confidence 12234 7899999999999 66678899999999999999999988654321000
Q ss_pred HHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeecC-----------cEEEEEEEcCCC
Q 019861 282 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNR-----------GFVMFTATKPSQ 333 (334)
Q Consensus 282 ~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~g-----------~~~~~~a~K~~~ 333 (334)
.........++.+++.++++++||++++..... ...+++++|+..
T Consensus 208 -------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 263 (265)
T 2i62_A 208 -------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGR 263 (265)
T ss_dssp -------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC-
T ss_pred -------CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccccc
Confidence 011113356799999999999999998865432 467888888753
No 61
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.74 E-value=6.9e-17 Score=151.05 Aligned_cols=162 Identities=16% Similarity=0.100 Sum_probs=117.3
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSI 232 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~f 232 (334)
+.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++.... +++. .|
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 249 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV-TA 249 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-CE
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC-CC
Confidence 3444555555678999999999999999999987789999999 999999998764321 2333 49
Q ss_pred eEEEeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEe--ccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHH
Q 019861 233 DAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY--IVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 308 (334)
|+|++.+++||++++. .+|++++++|+|||++++.++ ..... ..+..............+...++.+++.++++
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 327 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDG--ADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAG 327 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHH
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCC--CCcchhhhcchHHHHhCCCcCCCHHHHHHHHH
Confidence 9999999999999885 899999999999999999888 43211 11111111111111111346789999999999
Q ss_pred hCCCcEEEEeec-CcE-----EEEEEEcCC
Q 019861 309 ACGLVDFKCTRN-RGF-----VMFTATKPS 332 (334)
Q Consensus 309 ~~Gf~~v~~~~~-g~~-----~~~~a~K~~ 332 (334)
++||++++.... +.+ .++.++|+.
T Consensus 328 ~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 328 SAGLALASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp TTTEEEEEEEEECCSSCSSCEEEEEEEECC
T ss_pred HCCCceEEEEECCCCcccCCcEEEEEEECc
Confidence 999999886543 334 677777753
No 62
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.73 E-value=1e-16 Score=149.16 Aligned_cols=161 Identities=13% Similarity=0.173 Sum_probs=118.5
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCce
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSID 233 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD 233 (334)
.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++.... +++. .||
T Consensus 174 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D 251 (360)
T 1tw3_A 174 APAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR-KAD 251 (360)
T ss_dssp HHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS-CEE
T ss_pred HHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC-Ccc
Confidence 344455555678999999999999999999988789999999 999999998764321 2333 499
Q ss_pred EEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEec-cCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 234 AVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYI-VDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 234 ~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
+|++.+++||++++ ..+|++++++|+|||++++.++. .... ....+...+...... ..+...++.++|.++++++
T Consensus 252 ~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~t~~e~~~ll~~a 329 (360)
T 1tw3_A 252 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHEN-SFNEQFTELDLRMLV-FLGGALRTREKWDGLAASA 329 (360)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGG-CCSHHHHHHHHHHHH-HHSCCCCBHHHHHHHHHHT
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCC-CCcchhhhccHHHhh-hcCCcCCCHHHHHHHHHHC
Confidence 99999999999987 48999999999999999999877 3211 111111111111111 1135678999999999999
Q ss_pred CCcEEEEeec-Cc-----EEEEEEEcCC
Q 019861 311 GLVDFKCTRN-RG-----FVMFTATKPS 332 (334)
Q Consensus 311 Gf~~v~~~~~-g~-----~~~~~a~K~~ 332 (334)
||++++.... +. +.++.++|+.
T Consensus 330 Gf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (360)
T 1tw3_A 330 GLVVEEVRQLPSPTIPYDLSLLVLAPAA 357 (360)
T ss_dssp TEEEEEEEEEECSSSSCEEEEEEEEEC-
T ss_pred CCeEEEEEeCCCCcccCccEEEEEEeCC
Confidence 9999886543 33 6788888764
No 63
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.73 E-value=9e-18 Score=151.59 Aligned_cols=130 Identities=18% Similarity=0.202 Sum_probs=96.2
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---------------------------------
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--------------------------------- 223 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--------------------------------- 223 (334)
++.+|||||||+|.+...++... ..+|+|+|+|+.|++.|++++..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 57899999999999554444332 34999999999999988874321
Q ss_pred --------C----CC-----CCCCCceEEEeCccccC----CCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHH
Q 019861 224 --------E----SN-----FPKDSIDAVHAGAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR 282 (334)
Q Consensus 224 --------~----~~-----~~~~~fD~V~~~~vl~h----~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~ 282 (334)
+ .+ +++++||+|++..+|+| ++++..+|++++++|||||++++...........
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~----- 224 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLA----- 224 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEE-----
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEc-----
Confidence 1 12 33467999999999999 6678899999999999999999976543211000
Q ss_pred HHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 283 LLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 283 ~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
.....+..+++.+++.++|+++||++++..
T Consensus 225 ------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 225 ------GEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp ------TTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ------CCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 011113457899999999999999988743
No 64
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.72 E-value=9.8e-17 Score=147.75 Aligned_cols=159 Identities=14% Similarity=0.100 Sum_probs=118.3
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCCCCCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------SNFPKDS 231 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~~~~~ 231 (334)
...+...+...+ .+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... .+++ +.
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 233 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP-SN 233 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC-SS
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC-CC
Confidence 344445554444 8999999999999999999987779999999 99999998764321 1333 57
Q ss_pred ceEEEeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHH-HhhhhcCccCCCCHHHHHHHHH
Q 019861 232 IDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ-NMMQISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~t~~~l~~ll~ 308 (334)
||+|++.+++||++++. .+|++++++|+|||++++.+...+.... +....... ..... .....++.++|.++++
T Consensus 234 ~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~t~~e~~~ll~ 310 (334)
T 2ip2_A 234 GDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSVLWDVHLFMA-CAGRHRTTEEVVDLLG 310 (334)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHHHHHHHHHHH-HSCCCCBHHHHHHHHH
T ss_pred CCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhHHhhhHhHhh-CCCcCCCHHHHHHHHH
Confidence 99999999999999876 8999999999999999999887643221 11111111 11111 1245679999999999
Q ss_pred hCCCcEEEEee-cCcEEEEEEEc
Q 019861 309 ACGLVDFKCTR-NRGFVMFTATK 330 (334)
Q Consensus 309 ~~Gf~~v~~~~-~g~~~~~~a~K 330 (334)
++||++++... .+...++.++|
T Consensus 311 ~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 311 RGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HTTEEEEEEEEETTTEEEEEEEE
T ss_pred HCCCceeEEEECCCCCEEEEEEe
Confidence 99999988654 45677777776
No 65
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.72 E-value=2.2e-17 Score=141.54 Aligned_cols=128 Identities=14% Similarity=0.115 Sum_probs=98.3
Q ss_pred cCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc--------------CC------------C
Q 019861 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--------------ES------------N 226 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--------------~~------------~ 226 (334)
+...++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++... .. +
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~ 95 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALT 95 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSST
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCC
Confidence 3445678999999999999999999876 999999999999999987542 11 1
Q ss_pred CCC-CCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHH
Q 019861 227 FPK-DSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 303 (334)
Q Consensus 227 ~~~-~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l 303 (334)
+++ ++||+|++..+++|+++. ..++++++++|||||++++.+...... ...+....++.+++
T Consensus 96 ~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~---------------~~~~~~~~~~~~el 160 (203)
T 1pjz_A 96 ARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA---------------LLEGPPFSVPQTWL 160 (203)
T ss_dssp HHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS---------------SSSSCCCCCCHHHH
T ss_pred cccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc---------------ccCCCCCCCCHHHH
Confidence 223 689999999999999744 468999999999999966665543211 01112234789999
Q ss_pred HHHHHhCCCcEEEEe
Q 019861 304 EDLCRACGLVDFKCT 318 (334)
Q Consensus 304 ~~ll~~~Gf~~v~~~ 318 (334)
.+++++ ||+++...
T Consensus 161 ~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 161 HRVMSG-NWEVTKVG 174 (203)
T ss_dssp HHTSCS-SEEEEEEE
T ss_pred HHHhcC-CcEEEEec
Confidence 999998 99877643
No 66
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.72 E-value=1.2e-16 Score=139.85 Aligned_cols=161 Identities=17% Similarity=0.206 Sum_probs=113.8
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCC
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDS 231 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~ 231 (334)
..+.+...+.+ +.+|||+|||+|.++..+++. .+++|+|+++.+++.++++..... ++ .++
T Consensus 23 ~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~ 96 (243)
T 3d2l_A 23 WVAWVLEQVEP--GKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELEL-PEP 96 (243)
T ss_dssp HHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCC-SSC
T ss_pred HHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCC-CCC
Confidence 34455555554 689999999999999999887 399999999999999998765321 23 378
Q ss_pred ceEEEeCc-cccCCC---CHHHHHHHHHHcccCCcEEEEEEeccCCCCCc---hHHH------HHHHHHh----------
Q 019861 232 IDAVHAGA-AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IPFS------RLLRQNM---------- 288 (334)
Q Consensus 232 fD~V~~~~-vl~h~~---d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~---~~~~------~~~~~~~---------- 288 (334)
||+|++.. +++|+. ++..+|+++.++|+|||++++..++....... ..+. ...|...
T Consensus 97 fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (243)
T 3d2l_A 97 VDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVH 176 (243)
T ss_dssp EEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEE
T ss_pred cCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEE
Confidence 99999986 999995 45689999999999999999977653210000 0000 0000000
Q ss_pred -------------hh--hcCccCCCCHHHHHHHHHhCCCcEEEEeec---------CcEEEEEEEcC
Q 019861 289 -------------MQ--ISGSYTFLSEREIEDLCRACGLVDFKCTRN---------RGFVMFTATKP 331 (334)
Q Consensus 289 -------------~~--~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~---------g~~~~~~a~K~ 331 (334)
.. ...+.++++.+++.++|+++||++++.... ....+++++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 177 ELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEKI 243 (243)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEEC
T ss_pred EEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEeC
Confidence 00 011346789999999999999999886532 35678888885
No 67
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.72 E-value=2.6e-17 Score=143.90 Aligned_cols=160 Identities=19% Similarity=0.209 Sum_probs=113.3
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEe
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHA 237 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~ 237 (334)
+.+...+ .++.+|||+|||+|.++..+++.++ +++|+|+++.+++.++++.... .++ +++||+|++
T Consensus 32 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 32 DLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp HHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred HHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEE
Confidence 3444444 3478999999999999999999886 9999999999999999875321 123 578999995
Q ss_pred -CccccCCCCH---HHHHHHHHHcccCCcEEEEEEeccCCCCCchHH-----------HH---------H---H-HHHh-
Q 019861 238 -GAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-----------SR---------L---L-RQNM- 288 (334)
Q Consensus 238 -~~vl~h~~d~---~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~-----------~~---------~---~-~~~~- 288 (334)
..+++|+.++ ..+|++++++|+|||.+++.+++.......... .. . . ....
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTV 186 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEE
Confidence 5599999654 689999999999999999987665322100000 00 0 0 0000
Q ss_pred hh---------hcCccCCCCHHHHHHHHHhCCCcEEEEee-cCcEEEEEEEcC
Q 019861 289 MQ---------ISGSYTFLSEREIEDLCRACGLVDFKCTR-NRGFVMFTATKP 331 (334)
Q Consensus 289 ~~---------~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~-~g~~~~~~a~K~ 331 (334)
.. ...+.++++.+++.++|+++||+++.... .+...+++++||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 187 ADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp EETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred ecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEecC
Confidence 00 01134679999999999999997766543 345778888885
No 68
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.72 E-value=1.1e-16 Score=149.37 Aligned_cols=152 Identities=12% Similarity=0.118 Sum_probs=113.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------------CCCCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------------NFPKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~~~~~fD~V~~~~ 239 (334)
...+|||||||+|.++..+++.++..+++++|+ +.+++.+++++.... +++ ++||+|++.+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~ 256 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQ 256 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEES
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEec
Confidence 467999999999999999999988889999999 999999998754321 133 6899999999
Q ss_pred cccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHH--HHHHHHh-hhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 240 AIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS--RLLRQNM-MQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 240 vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
+|||++++. .+|++++++|+|||++++.++..+......... ......+ .........++.+++.++++++||++
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~ 336 (363)
T 3dp7_A 257 FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEV 336 (363)
T ss_dssp CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeE
Confidence 999999774 789999999999999999998765432221111 1111111 11123456789999999999999999
Q ss_pred EEEe-ecC-cEEEEEEEc
Q 019861 315 FKCT-RNR-GFVMFTATK 330 (334)
Q Consensus 315 v~~~-~~g-~~~~~~a~K 330 (334)
++.. ..| ...++.++|
T Consensus 337 v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 337 EEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp SCCCCCBTTTBEEEEEEE
T ss_pred EEEEeCCCCCceEEEEee
Confidence 8865 233 355555554
No 69
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.72 E-value=3.2e-16 Score=145.59 Aligned_cols=162 Identities=14% Similarity=0.131 Sum_probs=121.4
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCCCceEE
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKDSIDAV 235 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~~fD~V 235 (334)
.+...+......+|||||||+|.++..+++++|..+++..|. +.+++.++++..... ..+...+|+|
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~~~D~~ 248 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLPEADLY 248 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCCCCSEE
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCCCceEE
Confidence 444555555567999999999999999999999889999997 889999988754321 1123468999
Q ss_pred EeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHH-HHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 236 HAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 236 ~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
++.++||+|+|+. .+|++++++|+|||++++.+...+.... .+...... -.+.. ......+|.++|+++++++||
T Consensus 249 ~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~-~~~~~~~~dl~ml~-~~~g~ert~~e~~~ll~~AGf 326 (353)
T 4a6d_A 249 ILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRR-GPLLTQLYSLNMLV-QTEGQERTPTHYHMLLSSAGF 326 (353)
T ss_dssp EEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSC-CCHHHHHHHHHHHH-SSSCCCCCHHHHHHHHHHHTC
T ss_pred EeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCC-CCHHHHHHHHHHHH-hCCCcCCCHHHHHHHHHHCCC
Confidence 9999999999884 7899999999999999999987653322 22222222 12221 223456799999999999999
Q ss_pred cEEEEeec-CcEEEEEEEcCC
Q 019861 313 VDFKCTRN-RGFVMFTATKPS 332 (334)
Q Consensus 313 ~~v~~~~~-g~~~~~~a~K~~ 332 (334)
+++++... +.+.+++|+|.-
T Consensus 327 ~~v~v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 327 RDFQFKKTGAIYDAILARKGT 347 (353)
T ss_dssp EEEEEECCSSSCEEEEEECCC
T ss_pred ceEEEEEcCCceEEEEEEecC
Confidence 99997644 467889999963
No 70
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=2.9e-16 Score=132.38 Aligned_cols=129 Identities=18% Similarity=0.212 Sum_probs=106.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------CCCCCCCceEEEeC-ccccCCCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------SNFPKDSIDAVHAG-AAIHCWSS 246 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------~~~~~~~fD~V~~~-~vl~h~~d 246 (334)
++.+|||+|||+|.++..++..+. +++|+|+++.+++.++++.... .++++++||+|++. .+++|+.+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh
Confidence 478999999999999999999865 9999999999999999875421 14557899999998 78999853
Q ss_pred --HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeec----
Q 019861 247 --PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN---- 320 (334)
Q Consensus 247 --~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~---- 320 (334)
...+|+++.++|+|||.+++..+... .++.+++.++++++||++++....
T Consensus 124 ~~~~~~l~~~~~~l~~~G~l~~~~~~~~------------------------~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 179 (195)
T 3cgg_A 124 DGREPALANIHRALGADGRAVIGFGAGR------------------------GWVFGDFLEVAERVGLELENAFESWDLK 179 (195)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEETTS------------------------SCCHHHHHHHHHHHTEEEEEEESSTTCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCCC------------------------CcCHHHHHHHHHHcCCEEeeeecccccC
Confidence 47899999999999999999876532 258899999999999998875432
Q ss_pred -----CcEEEEEEEcC
Q 019861 321 -----RGFVMFTATKP 331 (334)
Q Consensus 321 -----g~~~~~~a~K~ 331 (334)
..+.+++++|+
T Consensus 180 ~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 180 PFVQGSEFLVAVFTKK 195 (195)
T ss_dssp BCCTTCSEEEEEEEEC
T ss_pred cCCCCCcEEEEEEecC
Confidence 45777777774
No 71
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=2.7e-16 Score=136.25 Aligned_cols=157 Identities=18% Similarity=0.244 Sum_probs=108.7
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------CCCCCCCce
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------SNFPKDSID 233 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------~~~~~~~fD 233 (334)
+.+...+.. +.+|||+|||+|.++..++..++ +++|+|+++.+++.++++.... .++++++||
T Consensus 30 ~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 105 (227)
T 1ve3_A 30 PLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFD 105 (227)
T ss_dssp HHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEE
T ss_pred HHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEE
Confidence 455555554 78999999999999999999987 9999999999999999876422 134567999
Q ss_pred EEEeCcc--ccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCc-h---HHHHHHHHH-hhhh---------------
Q 019861 234 AVHAGAA--IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL-I---PFSRLLRQN-MMQI--------------- 291 (334)
Q Consensus 234 ~V~~~~v--l~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~-~---~~~~~~~~~-~~~~--------------- 291 (334)
+|++..+ ++|..++..+|+++.++|+|||++++.+++....... . .....++.. ....
T Consensus 106 ~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (227)
T 1ve3_A 106 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQD 185 (227)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----
T ss_pred EEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchh
Confidence 9999999 5555678899999999999999999998874211000 0 000000000 0000
Q ss_pred --cCccCCCCHHHHHHHHHhCCCcEEEEeecCcE-EEEEE
Q 019861 292 --SGSYTFLSEREIEDLCRACGLVDFKCTRNRGF-VMFTA 328 (334)
Q Consensus 292 --~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~g~~-~~~~a 328 (334)
..+...+.. ++.++|+++||+.++....+.+ +++..
T Consensus 186 ~~~~~~~~w~~-~~~~~l~~~GF~~v~~~~~~~~~~~i~~ 224 (227)
T 1ve3_A 186 SFRVRFNVWGK-TGVELLAKLYFTKEAEEKVGNYSYLTVY 224 (227)
T ss_dssp CCEEEEECCCH-HHHHHHHTTTEEEEEEEEETTTEEEEEE
T ss_pred hheeehhhhch-HHHHHHHHHhhhHHHHHHhCCceeEEee
Confidence 001223334 7899999999999997766644 44433
No 72
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.70 E-value=1.3e-16 Score=147.91 Aligned_cols=156 Identities=15% Similarity=0.122 Sum_probs=111.4
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------------C--CCCCCCCce
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------------E--SNFPKDSID 233 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------------~--~~~~~~~fD 233 (334)
.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.++. +++... + .+++ +||
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~~D 249 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP--HAD 249 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC--CCS
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC--CCc
Confidence 444555555678999999999999999999988888999999 44444 211110 0 1233 899
Q ss_pred EEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 234 AVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 234 ~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
+|++.++|||++++ ..+|++++++|||||++++.+...+..... .....+...... ......++.++|.++++++|
T Consensus 250 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~t~~e~~~ll~~aG 327 (348)
T 3lst_A 250 VHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDA-HQSKEMDFMMLA-ARTGQERTAAELEPLFTAAG 327 (348)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSC-CHHHHHHHHHHH-TTSCCCCBHHHHHHHHHHTT
T ss_pred EEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCc-chhhhcChhhhh-cCCCcCCCHHHHHHHHHHCC
Confidence 99999999999988 699999999999999999998876543211 111111111111 23456789999999999999
Q ss_pred CcEEEEeec-CcEEEEEEEc
Q 019861 312 LVDFKCTRN-RGFVMFTATK 330 (334)
Q Consensus 312 f~~v~~~~~-g~~~~~~a~K 330 (334)
|++++.... +...++.+++
T Consensus 328 f~~~~~~~~~~~~~vie~~p 347 (348)
T 3lst_A 328 LRLDRVVGTSSVMSIAVGVP 347 (348)
T ss_dssp EEEEEEEECSSSCEEEEEEE
T ss_pred CceEEEEECCCCcEEEEEEe
Confidence 999987654 4455665554
No 73
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.69 E-value=1.9e-16 Score=143.51 Aligned_cols=150 Identities=15% Similarity=0.167 Sum_probs=105.9
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------------CCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------------NFP 228 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~~ 228 (334)
...+...+... +.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++..... ++
T Consensus 72 ~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~- 147 (299)
T 3g2m_A 72 AREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL- 147 (299)
T ss_dssp HHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-
T ss_pred HHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-
Confidence 34445555443 44999999999999999999875 89999999999999998865421 23
Q ss_pred CCCceEEEeC-ccccCCCC--HHHHHHHHHHcccCCcEEEEEEeccCCC-----CCchHHHHHHHH---Hhh--------
Q 019861 229 KDSIDAVHAG-AAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGP-----FNLIPFSRLLRQ---NMM-------- 289 (334)
Q Consensus 229 ~~~fD~V~~~-~vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~~~~~-----~~~~~~~~~~~~---~~~-------- 289 (334)
+++||+|++. .+++|+++ ...+|++++++|+|||++++.+++.+.. .....+...... ...
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 227 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEI 227 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEE
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccE
Confidence 6789999975 55666652 4789999999999999999999887421 000010000000 000
Q ss_pred ----------------hhcCccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 290 ----------------QISGSYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 290 ----------------~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
....+.++|+.+++.++|+++||++++...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 273 (299)
T 3g2m_A 228 QEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTP 273 (299)
T ss_dssp EEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEe
Confidence 011234578999999999999999988643
No 74
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.69 E-value=3.8e-16 Score=141.54 Aligned_cols=149 Identities=15% Similarity=0.176 Sum_probs=106.1
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcC---C------------
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQE---S------------ 225 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~---~------------ 225 (334)
+....+.+..+.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.++++.... .
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 100 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD 100 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh
Confidence 4556666666654 357899999999999999999753 5679999999999999999876442 1
Q ss_pred -CCCC------CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec---cCCCCCchHHHHHHHHHhhhhcCcc
Q 019861 226 -NFPK------DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI---VDGPFNLIPFSRLLRQNMMQISGSY 295 (334)
Q Consensus 226 -~~~~------~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (334)
++++ ++||+|++..+++|+ ++..+++++.++|+|||.+++.+.. .............+..........+
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 179 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYW 179 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGS
T ss_pred CCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchh
Confidence 2334 799999999999999 9999999999999999999984433 2222222222222211100111111
Q ss_pred CCCCHHHHHHHHHhCCC
Q 019861 296 TFLSEREIEDLCRACGL 312 (334)
Q Consensus 296 ~~~t~~~l~~ll~~~Gf 312 (334)
.....+.+.+++++.||
T Consensus 180 ~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 180 EQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp CTTHHHHHHTTTTTCCC
T ss_pred hchhhHHHHHhhhccCC
Confidence 11356678999999999
No 75
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.69 E-value=4.9e-17 Score=144.29 Aligned_cols=106 Identities=30% Similarity=0.436 Sum_probs=88.5
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh--------cCCCCCCCCce
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ--------QESNFPKDSID 233 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~--------~~~~~~~~~fD 233 (334)
|.++++.+..+.+. +.+|||||||+|.++..|++.+. +|+|+|+|+.|++.|++... ...++++++||
T Consensus 26 p~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD 101 (257)
T 4hg2_A 26 PRALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVD 101 (257)
T ss_dssp CHHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEE
T ss_pred HHHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCccc
Confidence 45666777776654 57999999999999999999876 99999999999998875311 12368899999
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
+|++..++||+ ++..++++++|+|||||+|++......
T Consensus 102 ~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 102 VAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp EEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999766 788999999999999999999887654
No 76
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.69 E-value=6.8e-16 Score=144.14 Aligned_cols=162 Identities=16% Similarity=0.139 Sum_probs=115.9
Q ss_pred HHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-----c--CCCCCCCCceEEEeC
Q 019861 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-----Q--ESNFPKDSIDAVHAG 238 (334)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-----~--~~~~~~~~fD~V~~~ 238 (334)
..+...+. ..+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++.-. . ..+++++ |+|++.
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p~~--D~v~~~ 268 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAFSGVEHLGGDMFDGVPKG--DAIFIK 268 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCC--SEEEEE
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhcCCCEEEecCCCCCCCCC--CEEEEe
Confidence 34444444 44568999999999999999999988889999999 888877764210 0 0145544 999999
Q ss_pred ccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchH--HHH-HHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 239 AAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIP--FSR-LLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 239 ~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
++|||++++. .+|++++++|+|||++++.+...+....... ... .+.............++.++|+++++++||+
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~ 348 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFR 348 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCC
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCe
Confidence 9999999765 7899999999999999999987653322111 111 1111122112245677999999999999999
Q ss_pred EEEEee-cCcEEEEEEEcC
Q 019861 314 DFKCTR-NRGFVMFTATKP 331 (334)
Q Consensus 314 ~v~~~~-~g~~~~~~a~K~ 331 (334)
+++... .+...++.+.|+
T Consensus 349 ~v~~~~~~~~~~vie~~k~ 367 (368)
T 3reo_A 349 GFKVASCAFNTYVMEFLKT 367 (368)
T ss_dssp EEEEEEEETTEEEEEEECC
T ss_pred eeEEEEeCCCcEEEEEEeC
Confidence 998654 455666666664
No 77
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.69 E-value=1.8e-17 Score=149.98 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=100.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------------------------
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------------------------- 225 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------------------------- 225 (334)
++.+|||||||+|.++..++...+..+|+|+|+++.+++.|++++....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 5789999999999999999998656799999999999999997643210
Q ss_pred ----------------------------------------------CCCCCCceEEEeCccccCCC------CHHHHHHH
Q 019861 226 ----------------------------------------------NFPKDSIDAVHAGAAIHCWS------SPSTGVAE 253 (334)
Q Consensus 226 ----------------------------------------------~~~~~~fD~V~~~~vl~h~~------d~~~~L~~ 253 (334)
++.+++||+|++..+++|+. ++..++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 13467999999999998875 67789999
Q ss_pred HHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHh--CCCcEEEEe
Q 019861 254 ISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA--CGLVDFKCT 318 (334)
Q Consensus 254 i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~--~Gf~~v~~~ 318 (334)
++++|+|||++++.....................+. ...+.++++.++|.+ +||+.++.+
T Consensus 206 ~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~-----~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYY-----RIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHH-----HCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhh-----cEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999976543211000000011111111 123458899999999 999887754
No 78
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.69 E-value=5e-16 Score=137.48 Aligned_cols=135 Identities=16% Similarity=0.151 Sum_probs=100.9
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-------------------CC-
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------------------ES- 225 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-------------------~~- 225 (334)
.+.+...+...++.+|||+|||+|..+..|++.|. +|+|+|+|+.+++.|+++... ..
T Consensus 57 ~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 57 KKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp HHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred HHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 33443333334578999999999999999999987 999999999999999876531 01
Q ss_pred -----------CCCC-CCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhh
Q 019861 226 -----------NFPK-DSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI 291 (334)
Q Consensus 226 -----------~~~~-~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (334)
++++ ++||+|++..+++|++.+ ..+++++.++|||||++++.+....... .
T Consensus 135 i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~---------------~ 199 (252)
T 2gb4_A 135 ISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK---------------H 199 (252)
T ss_dssp EEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS---------------C
T ss_pred eEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc---------------C
Confidence 1222 789999999999999743 5789999999999999987666543110 0
Q ss_pred cCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 292 SGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 292 ~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
.+....++.+++.++++. +|+++...
T Consensus 200 ~g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 200 AGPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp CCSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred CCCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 112234799999999987 59887643
No 79
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.68 E-value=3.5e-17 Score=148.73 Aligned_cols=142 Identities=15% Similarity=0.121 Sum_probs=99.9
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------------------CCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------------------NFP 228 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------------------~~~ 228 (334)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.|++.|+++..... +++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 46899999999998666665554 3499999999999999998754211 245
Q ss_pred CCCceEEEeCccccCC---CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchH-----HHHH--HHH-----------H
Q 019861 229 KDSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIP-----FSRL--LRQ-----------N 287 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~---~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~-----~~~~--~~~-----------~ 287 (334)
+++||+|+|..++||+ .+...+|++++++|||||++++.+++.+....... .... .+. .
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 6899999999999875 35579999999999999999999997532110000 0000 000 0
Q ss_pred ---hhhh---cC-ccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 288 ---MMQI---SG-SYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 288 ---~~~~---~~-~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
+... .. ...+++.+++.++++++||++++...
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 0000 00 12367889999999999999988654
No 80
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.67 E-value=6.2e-16 Score=144.61 Aligned_cols=159 Identities=16% Similarity=0.187 Sum_probs=113.0
Q ss_pred HHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-----cC--CCCCCCCceEEEeCc
Q 019861 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-----QE--SNFPKDSIDAVHAGA 239 (334)
Q Consensus 168 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-----~~--~~~~~~~fD~V~~~~ 239 (334)
.+...+. ..++.+|||||||+|.++..+++.++...++++|+ +.+++.+++.-. .+ .++++ ||+|++.+
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~~--~D~v~~~~ 275 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPLSGIEHVGGDMFASVPQ--GDAMILKA 275 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCC--EEEEEEES
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhcCCCEEEeCCcccCCCC--CCEEEEec
Confidence 3334443 34568999999999999999999988789999999 888887764210 00 13333 99999999
Q ss_pred cccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCch--H-HHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 240 AIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLI--P-FSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 240 vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
+|||++++. .+|++++++|+|||++++.++..+...... . ....+...... ..+...++.++|.++++++||++
T Consensus 276 ~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~t~~e~~~ll~~aGf~~ 354 (372)
T 1fp1_D 276 VCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSK 354 (372)
T ss_dssp SGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHH-HHSCCCEEHHHHHHHHHHTTCSE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHh-ccCCccCCHHHHHHHHHHCCCce
Confidence 999999988 999999999999999999987764332111 0 11111111111 11235679999999999999999
Q ss_pred EEEee--cCcEEEEEEEc
Q 019861 315 FKCTR--NRGFVMFTATK 330 (334)
Q Consensus 315 v~~~~--~g~~~~~~a~K 330 (334)
++... .+.+.++.++|
T Consensus 355 ~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 355 FQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp EEEEEEETTTEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEEeC
Confidence 88654 34356766654
No 81
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.67 E-value=3.9e-17 Score=139.30 Aligned_cols=123 Identities=17% Similarity=0.157 Sum_probs=97.5
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------CCCCCCCceEEEeCccccCC
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------SNFPKDSIDAVHAGAAIHCW 244 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------~~~~~~~fD~V~~~~vl~h~ 244 (334)
+ +|||||||+|.++..+++.+. +++|+|+++.+++.++++.... .++++++||+|++.. .|+
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~ 105 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHL 105 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCC
T ss_pred C-CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcC
Confidence 5 999999999999999998865 9999999999999999876421 135578999999954 455
Q ss_pred C--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEE
Q 019861 245 S--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 317 (334)
Q Consensus 245 ~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~ 317 (334)
. ++..+|+++.++|+|||.+++.+++..... + .......+..+++.+++.++++ ||++++.
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ----Y------NTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG----G------TSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecccccc----C------CCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 3 667899999999999999999999865321 0 0111123567899999999999 9998873
No 82
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.67 E-value=1.9e-15 Score=135.35 Aligned_cols=134 Identities=16% Similarity=0.113 Sum_probs=102.5
Q ss_pred CCCcEEEECCCc---CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C----------------CCCC
Q 019861 177 LGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N----------------FPKD 230 (334)
Q Consensus 177 ~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~----------------~~~~ 230 (334)
...+|||||||+ |.++..+.+..+..+|+|+|+|+.|++.+++++.... . ++..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 347999999999 9888877777777799999999999999998874321 1 2225
Q ss_pred CceEEEeCccccCCCC--HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHH
Q 019861 231 SIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 308 (334)
+||+|++..+|||+++ +..+|++++++|+|||+|++.+...+. . .........+........+++.+++.+++
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~s~~ei~~~l- 231 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG-L---PAQQKLARITRENLGEGWARTPEEIERQF- 231 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS-C---HHHHHHHHHHHHHHSCCCCBCHHHHHHTT-
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc-h---HHHHHHHHHHHhcCCCCccCCHHHHHHHh-
Confidence 7999999999999997 889999999999999999999988643 1 11112222222212245678999999999
Q ss_pred hCCCcEEE
Q 019861 309 ACGLVDFK 316 (334)
Q Consensus 309 ~~Gf~~v~ 316 (334)
.||++++
T Consensus 232 -~G~~l~~ 238 (274)
T 2qe6_A 232 -GDFELVE 238 (274)
T ss_dssp -TTCEECT
T ss_pred -CCCeEcc
Confidence 5998765
No 83
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.66 E-value=1.6e-15 Score=141.45 Aligned_cols=160 Identities=19% Similarity=0.132 Sum_probs=114.3
Q ss_pred HHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-----c--CCCCCCCCceEEEeCc
Q 019861 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-----Q--ESNFPKDSIDAVHAGA 239 (334)
Q Consensus 168 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-----~--~~~~~~~~fD~V~~~~ 239 (334)
.+...+. ..+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++.-. . ..+++++ |+|++.+
T Consensus 191 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~D~~~~~p~~--D~v~~~~ 267 (364)
T 3p9c_A 191 KLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQFPGVTHVGGDMFKEVPSG--DTILMKW 267 (364)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCCTTEEEEECCTTTCCCCC--SEEEEES
T ss_pred HHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhcCCeEEEeCCcCCCCCCC--CEEEehH
Confidence 3444444 44568999999999999999999988889999999 888877764210 0 0145544 9999999
Q ss_pred cccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHH--H-HHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 240 AIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF--S-RLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 240 vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
+|||++++ ..+|++++++|+|||++++.+...+........ . ..+...+.........++.++|.++++++||++
T Consensus 268 vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~ 347 (364)
T 3p9c_A 268 ILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTG 347 (364)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCE
T ss_pred HhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCce
Confidence 99999866 488999999999999999998876543221111 1 111111221123456679999999999999999
Q ss_pred EEEee-cCcEEEEEEEc
Q 019861 315 FKCTR-NRGFVMFTATK 330 (334)
Q Consensus 315 v~~~~-~g~~~~~~a~K 330 (334)
++... .+...++.+.|
T Consensus 348 v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 348 VKSTYIYANAWAIEFTK 364 (364)
T ss_dssp EEEEEEETTEEEEEEEC
T ss_pred EEEEEcCCceEEEEEeC
Confidence 98654 45566666654
No 84
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.66 E-value=9.5e-16 Score=137.94 Aligned_cols=137 Identities=16% Similarity=0.173 Sum_probs=106.1
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCccccC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGAAIHC 243 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~vl~h 243 (334)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++..... ++ +++||+|++..+++|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 578999999999999999999975 99999999999999998765332 12 678999999999999
Q ss_pred CCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeec-
Q 019861 244 WSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN- 320 (334)
Q Consensus 244 ~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~- 320 (334)
++++ ..+|+++.++|+|||.+++........... .......++.+++.++++. |+++.....
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ 261 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC-------------PLPFSFTFAENELKEYYKD--WEFLEYNENM 261 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-------------SSCCSCCBCTTHHHHHTTT--SEEEEEECCE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC-------------CCCccccCCHHHHHHHhcC--CEEEEEEccC
Confidence 9755 489999999999999988877654321111 1123457789999999865 877764211
Q ss_pred ---------C-----cEEEEEEEcC
Q 019861 321 ---------R-----GFVMFTATKP 331 (334)
Q Consensus 321 ---------g-----~~~~~~a~K~ 331 (334)
| .+..++|+||
T Consensus 262 ~~~~~~~~~g~~~~~~~~~l~arK~ 286 (286)
T 3m70_A 262 GELHKTDENGNRIKMKFATMLARKK 286 (286)
T ss_dssp EEEEEECSSCCEEEEEEEEEEEECC
T ss_pred CeeeeccCCCCEEEEEEEEEEEecC
Confidence 2 3667778886
No 85
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.65 E-value=3.6e-15 Score=131.49 Aligned_cols=158 Identities=22% Similarity=0.242 Sum_probs=108.9
Q ss_pred cccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEe
Q 019861 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHA 237 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~ 237 (334)
......++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++..... ++ .++||+|++
T Consensus 35 ~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~ 111 (252)
T 1wzn_A 35 KEDAKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-KNEFDAVTM 111 (252)
T ss_dssp HHTCSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-CSCEEEEEE
T ss_pred HHhcccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhccc-CCCccEEEE
Confidence 333444578999999999999999999865 99999999999999998765321 22 368999998
Q ss_pred Cc-cccCCC--CHHHHHHHHHHcccCCcEEEEEEeccCCCC---C-------------------chHHHHHHH-----HH
Q 019861 238 GA-AIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPF---N-------------------LIPFSRLLR-----QN 287 (334)
Q Consensus 238 ~~-vl~h~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~---~-------------------~~~~~~~~~-----~~ 287 (334)
.. +++|+. ++..+|+++.++|+|||.+++..++..... . ..+...... ..
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (252)
T 1wzn_A 112 FFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWREVEPAVQKLRFKRLVQI 191 (252)
T ss_dssp CSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-------CCEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred cCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeecccccccceeeheeeeee
Confidence 74 455554 456899999999999999999877631000 0 000000000 00
Q ss_pred hhh--------hcCccCCCCHHHHHHHHHhCCCcEEEEeec--------CcEEEEEEEcCC
Q 019861 288 MMQ--------ISGSYTFLSEREIEDLCRACGLVDFKCTRN--------RGFVMFTATKPS 332 (334)
Q Consensus 288 ~~~--------~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~--------g~~~~~~a~K~~ 332 (334)
... ...+.++++.++++ +|+++||++++.... ...++++++|++
T Consensus 192 ~~~~g~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~~~~~~~~~~~r~~~va~k~~ 251 (252)
T 1wzn_A 192 LRPNGEVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGNLKRELSPNDMRYWIVGIAKS 251 (252)
T ss_dssp ECTTSCEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEETTBSSCCTTCCEEEEEEECCC
T ss_pred cccCCceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecccccccCCCCceEEEEEEeec
Confidence 000 01245789999997 899999999886432 357888888864
No 86
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.65 E-value=7.5e-16 Score=139.00 Aligned_cols=136 Identities=19% Similarity=0.231 Sum_probs=103.7
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CC-CCCCceEEEeCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NF-PKDSIDAVHAGA 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~-~~~~fD~V~~~~ 239 (334)
.++.+|||||||+|.++..++..+ ..+++|+|+++.+++.++++..... ++ ++++||+|++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 347899999999999999888875 4599999999999999998865321 34 477899999999
Q ss_pred cccC----CCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHH------------------------hh--
Q 019861 240 AIHC----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN------------------------MM-- 289 (334)
Q Consensus 240 vl~h----~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~------------------------~~-- 289 (334)
+++| ..++..+|+++.++|+|||++++.+++... ....+... +.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 215 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFT 215 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH------HHHHHccCccCCeeEEEEeCccccccccccceEEEE
Confidence 9977 456789999999999999999999987521 11100000 00
Q ss_pred --h--hcCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 290 --Q--ISGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 290 --~--~~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
. ...+.++++.+++.++++++||++++..
T Consensus 216 l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~ 248 (298)
T 1ri5_A 216 LLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERK 248 (298)
T ss_dssp ETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEE
T ss_pred EchhhcCCcccccCHHHHHHHHHHcCCEEEEec
Confidence 0 0012357899999999999999998854
No 87
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.65 E-value=1.3e-15 Score=130.17 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=103.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCCCceEEEeCccccCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKDSIDAVHAGAAIHCW 244 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~~fD~V~~~~vl~h~ 244 (334)
++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.++++..... .+.+++||+|++...++++
T Consensus 60 ~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~~ 138 (205)
T 3grz_A 60 KPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEIL 138 (205)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHHH
Confidence 47899999999999999988864 4699999999999999998865321 2446899999999888764
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeecCcEE
Q 019861 245 SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNRGFV 324 (334)
Q Consensus 245 ~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~g~~~ 324 (334)
..+++++.++|+|||++++.+.... +.+++.++++++||++++....+.|.
T Consensus 139 ---~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~~~~~Gf~~~~~~~~~~w~ 189 (205)
T 3grz_A 139 ---LDLIPQLDSHLNEDGQVIFSGIDYL--------------------------QLPKIEQALAENSFQIDLKMRAGRWI 189 (205)
T ss_dssp ---HHHGGGSGGGEEEEEEEEEEEEEGG--------------------------GHHHHHHHHHHTTEEEEEEEEETTEE
T ss_pred ---HHHHHHHHHhcCCCCEEEEEecCcc--------------------------cHHHHHHHHHHcCCceEEeeccCCEE
Confidence 6789999999999999999766532 46789999999999999988777777
Q ss_pred EEEEEcC
Q 019861 325 MFTATKP 331 (334)
Q Consensus 325 ~~~a~K~ 331 (334)
.++.+++
T Consensus 190 ~~~~~~~ 196 (205)
T 3grz_A 190 GLAISRK 196 (205)
T ss_dssp EEEEEEC
T ss_pred EEEEecc
Confidence 6666654
No 88
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.65 E-value=1.7e-15 Score=133.05 Aligned_cols=134 Identities=14% Similarity=0.062 Sum_probs=101.9
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------CCCC----------CCceEEEeCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NFPK----------DSIDAVHAGA 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~~~~----------~~fD~V~~~~ 239 (334)
.++.+|||||||+|.++..+++.++ +|+|+|+|+.+++.++++..... .+.+ ..||+|++..
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcc
Confidence 4578999999999999999999987 99999999999999998764221 1111 2489999999
Q ss_pred cccCCC--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHH----------hhhhcCccCCCCHHHHHHHH
Q 019861 240 AIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN----------MMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 240 vl~h~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~t~~~l~~ll 307 (334)
+++|++ ++..+|++++++|||||++++.++.... ..+....... ..........++.+++.+++
T Consensus 133 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (245)
T 3ggd_A 133 GFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC----IDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF 208 (245)
T ss_dssp SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH----HHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc----cHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh
Confidence 999999 7889999999999999999998886532 1222111111 11111123457999999999
Q ss_pred HhCCCcEEEE
Q 019861 308 RACGLVDFKC 317 (334)
Q Consensus 308 ~~~Gf~~v~~ 317 (334)
+||++++.
T Consensus 209 --aGf~~~~~ 216 (245)
T 3ggd_A 209 --PDFEILSQ 216 (245)
T ss_dssp --TTEEEEEE
T ss_pred --CCCEEEec
Confidence 99999874
No 89
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.65 E-value=3.7e-16 Score=133.73 Aligned_cols=139 Identities=18% Similarity=0.219 Sum_probs=100.4
Q ss_pred CCCCcEEEECCCcCHH-HHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------CCCCCCCceEEEeCccc
Q 019861 176 VLGGNIIDASCGSGLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------SNFPKDSIDAVHAGAAI 241 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~-~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------~~~~~~~fD~V~~~~vl 241 (334)
.++.+|||+|||+|.+ ...++..+. +++|+|+|+.+++.++++.... .++++++||+|++..++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 99 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTI 99 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChH
Confidence 3468999999999987 555555554 9999999999999999875421 14557899999999999
Q ss_pred cCC--CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCc--hHHHHHHHHHhhh-hcCccCCCCHHHHHHHHHhCCCcEEE
Q 019861 242 HCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--IPFSRLLRQNMMQ-ISGSYTFLSEREIEDLCRACGLVDFK 316 (334)
Q Consensus 242 ~h~--~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~t~~~l~~ll~~~Gf~~v~ 316 (334)
+|+ .++..+++++.++|+|||++++.+++....... .++.......... .....++++.+++.+++++.||...+
T Consensus 100 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 100 FHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred HhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 999 577899999999999999999999876432110 0000000000000 01123688999999999999997655
No 90
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.65 E-value=4.1e-16 Score=134.29 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=97.3
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCCCCCCCceEEEeCccccCCCCHHHHHHHHH
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKDSIDAVHAGAAIHCWSSPSTGVAEIS 255 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~ 255 (334)
.++.+|||||||+|.++..+. .+++|+|+++..+......+ ...++++++||+|++..++|| .++..+|+++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~ 138 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASLDPRVTVCDM-AQVPLEDESVDVAVFCLSLMG-TNIRDFLEEAN 138 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCSSTTEEESCT-TSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHH
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCCCceEEEecc-ccCCCCCCCEeEEEEehhccc-cCHHHHHHHHH
Confidence 456899999999999988773 38999999987111000000 112466789999999999964 89999999999
Q ss_pred HcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe-ecCcEEEEEEEcCC
Q 019861 256 RVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT-RNRGFVMFTATKPS 332 (334)
Q Consensus 256 r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~-~~g~~~~~~a~K~~ 332 (334)
++|+|||++++.++.. .+.+.+++.++++++||++++.. ..+.+.+++++|..
T Consensus 139 ~~L~~gG~l~i~~~~~------------------------~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 139 RVLKPGGLLKVAEVSS------------------------RFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTG 192 (215)
T ss_dssp HHEEEEEEEEEEECGG------------------------GCSCHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEECS
T ss_pred HhCCCCeEEEEEEcCC------------------------CCCCHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEecC
Confidence 9999999999987653 12388999999999999998855 44567788888763
No 91
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.64 E-value=7.9e-16 Score=132.53 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=87.5
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------CCCCCCceEE
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------NFPKDSIDAV 235 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~~~~~fD~V 235 (334)
..+...+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++..... ..++++||+|
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v 118 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLI 118 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEE
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEE
Confidence 3455556666778999999999999999999875 99999999999999999865421 1246899999
Q ss_pred EeCccccCCCCH---HHHHHHHHHcccCCcEEEEEEecc
Q 019861 236 HAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 236 ~~~~vl~h~~d~---~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++..+++|++++ ..+|+++.++|+|||++++.++..
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999998 467999999999999999988763
No 92
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.64 E-value=1.5e-14 Score=123.58 Aligned_cols=120 Identities=15% Similarity=0.073 Sum_probs=97.8
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CC-CC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NF-PK 229 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~-~~ 229 (334)
.....+...+...++.+|||+|||+|.++..+++.++..+++|+|+++.+++.++++..... .+ ..
T Consensus 27 ~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 106 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDL 106 (204)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTS
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcC
Confidence 33345666667777899999999999999999999877799999999999999998764211 11 23
Q ss_pred CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHh
Q 019861 230 DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 309 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 309 (334)
++||+|++..+++ ++..+++++.++|+|||++++.....+ +.+++.+++++
T Consensus 107 ~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------------------~~~~~~~~l~~ 157 (204)
T 3e05_A 107 PDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD--------------------------TLTKAVEFLED 157 (204)
T ss_dssp CCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH--------------------------HHHHHHHHHHH
T ss_pred CCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc--------------------------cHHHHHHHHHH
Confidence 6799999998776 788999999999999999999776521 35678899999
Q ss_pred CCC
Q 019861 310 CGL 312 (334)
Q Consensus 310 ~Gf 312 (334)
+||
T Consensus 158 ~g~ 160 (204)
T 3e05_A 158 HGY 160 (204)
T ss_dssp TTC
T ss_pred CCC
Confidence 998
No 93
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.64 E-value=2.2e-15 Score=139.86 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=109.9
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-----cC--CCCCCCCceEEEeCccccCCCCHH-
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-----QE--SNFPKDSIDAVHAGAAIHCWSSPS- 248 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-----~~--~~~~~~~fD~V~~~~vl~h~~d~~- 248 (334)
++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++.-. .+ .+++ .||+|++.++|||++++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~p--~~D~v~~~~~lh~~~d~~~ 264 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGSNNLTYVGGDMFTSIP--NADAVLLKYILHNWTDKDC 264 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCBTTEEEEECCTTTCCC--CCSEEEEESCGGGSCHHHH
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccCCCcEEEeccccCCCC--CccEEEeehhhccCCHHHH
Confidence 467999999999999999999987789999999 999887764210 00 1233 399999999999999887
Q ss_pred -HHHHHHHHcccC---CcEEEEEEeccCCCCCch--HHHHHHHH-HhhhhcCccCCCCHHHHHHHHHhCCCcEEEEee-c
Q 019861 249 -TGVAEISRVLRP---GGVFVGTTYIVDGPFNLI--PFSRLLRQ-NMMQISGSYTFLSEREIEDLCRACGLVDFKCTR-N 320 (334)
Q Consensus 249 -~~L~~i~r~Lkp---gG~lii~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~-~ 320 (334)
.+|++++++|+| ||++++.++......... ........ .... . ....++.++|.++++++||++++... .
T Consensus 265 ~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~-~-~g~~~t~~e~~~ll~~aGf~~~~~~~~~ 342 (352)
T 1fp2_A 265 LRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMAC-L-NGKERNEEEWKKLFIEAGFQHYKISPLT 342 (352)
T ss_dssp HHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGG-G-TCCCEEHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHh-c-cCCCCCHHHHHHHHHHCCCCeeEEEecC
Confidence 999999999999 999999988765432210 11111111 1111 1 14557999999999999999988654 4
Q ss_pred CcEEEEEEEc
Q 019861 321 RGFVMFTATK 330 (334)
Q Consensus 321 g~~~~~~a~K 330 (334)
+...++.+++
T Consensus 343 ~~~~vie~~~ 352 (352)
T 1fp2_A 343 GFLSLIEIYP 352 (352)
T ss_dssp TTEEEEEEEC
T ss_pred CCcEEEEEeC
Confidence 5556666653
No 94
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.63 E-value=5.2e-15 Score=128.59 Aligned_cols=139 Identities=13% Similarity=0.093 Sum_probs=102.8
Q ss_pred ccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEE
Q 019861 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAV 235 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V 235 (334)
.+...+|.+|||+|||+|.++..+++. |+.++|+|+|+++.|++.++++..... ++..+++|+|
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEE
Confidence 456788999999999999999999987 788899999999999999988765432 3456789999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEE
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDF 315 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v 315 (334)
++. +.|..++..++.++++.|||||++++....... .. .. + ... ..++..+.|+++||+.+
T Consensus 152 f~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-----d~--------~~-p-~~~--~~~~ev~~L~~~GF~l~ 212 (233)
T 4df3_A 152 YAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-----DV--------TT-E-PSE--VYKREIKTLMDGGLEIK 212 (233)
T ss_dssp EEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-----HH--------HT-C-CCH--HHHHHHHHHHHTTCCEE
T ss_pred EEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-----CC--------CC-C-hHH--HHHHHHHHHHHCCCEEE
Confidence 864 455567889999999999999999987643310 00 00 0 000 11334567889999999
Q ss_pred EEeecC----cEEEEEEE
Q 019861 316 KCTRNR----GFVMFTAT 329 (334)
Q Consensus 316 ~~~~~g----~~~~~~a~ 329 (334)
+..... .+.+++++
T Consensus 213 e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 213 DVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp EEEECTTTSTTEEEEEEC
T ss_pred EEEccCCCCCceEEEEEE
Confidence 876553 36777665
No 95
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.63 E-value=1.4e-16 Score=139.78 Aligned_cols=91 Identities=12% Similarity=0.268 Sum_probs=78.3
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEe---
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHA--- 237 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~--- 237 (334)
.+|++|||||||+|..+..+++..+ .+++|+|+++.+++.|+++..... .+++++||.|+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 3588999999999999999988764 589999999999999998865432 467889999975
Q ss_pred --CccccCCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 238 --GAAIHCWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 238 --~~vl~h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
..+++|+.++..++++++|+|||||++++.
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 566788889999999999999999999874
No 96
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.62 E-value=1.4e-14 Score=126.23 Aligned_cols=140 Identities=13% Similarity=0.101 Sum_probs=101.4
Q ss_pred HcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCce
Q 019861 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSID 233 (334)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD 233 (334)
.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+++.+++.++++..... ++. ++||
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEE
Confidence 44455556889999999999999999988535699999999999999988754321 122 6799
Q ss_pred EEEeCccccCCCCH---HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 234 AVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 234 ~V~~~~vl~h~~d~---~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
+|+ ++++++ ..+++++.++|+|||++++........ ...+.. .+..+++. +|+++
T Consensus 146 ~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~~~~~~---------------~~~~~~l~-~l~~~ 203 (230)
T 1fbn_A 146 VIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARSID-VTKDPK---------------EIFKEQKE-ILEAG 203 (230)
T ss_dssp EEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC-SSSCHH---------------HHHHHHHH-HHHHH
T ss_pred EEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCC-CCCCHH---------------HhhHHHHH-HHHHC
Confidence 998 556777 788999999999999999973221111 111110 11236787 89999
Q ss_pred CCcEEEEeecCc----EEEEEEEcCC
Q 019861 311 GLVDFKCTRNRG----FVMFTATKPS 332 (334)
Q Consensus 311 Gf~~v~~~~~g~----~~~~~a~K~~ 332 (334)
||++++...... +.+++++|++
T Consensus 204 Gf~~~~~~~~~~~~~~~~~v~~~k~~ 229 (230)
T 1fbn_A 204 GFKIVDEVDIEPFEKDHVMFVGIWEG 229 (230)
T ss_dssp TEEEEEEEECTTTSTTEEEEEEEECC
T ss_pred CCEEEEEEccCCCccceEEEEEEeCC
Confidence 999988765433 6788888765
No 97
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.61 E-value=1.2e-14 Score=128.67 Aligned_cols=124 Identities=17% Similarity=0.233 Sum_probs=104.0
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCCCceEEEeCccccC
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKDSIDAVHAGAAIHC 243 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~~fD~V~~~~vl~h 243 (334)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++..... .+++++||+|+++...++
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~~ 196 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAEL 196 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHHH
Confidence 3478999999999999999999886 99999999999999998765332 144678999999766554
Q ss_pred CCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeecCcE
Q 019861 244 WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNRGF 323 (334)
Q Consensus 244 ~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~g~~ 323 (334)
...++.++.++|+|||+++++..... +.+++.++++++||++++....+.|
T Consensus 197 ---~~~~l~~~~~~LkpgG~lils~~~~~--------------------------~~~~v~~~l~~~Gf~~~~~~~~~~W 247 (254)
T 2nxc_A 197 ---HAALAPRYREALVPGGRALLTGILKD--------------------------RAPLVREAMAGAGFRPLEEAAEGEW 247 (254)
T ss_dssp ---HHHHHHHHHHHEEEEEEEEEEEEEGG--------------------------GHHHHHHHHHHTTCEEEEEEEETTE
T ss_pred ---HHHHHHHHHHHcCCCCEEEEEeeccC--------------------------CHHHHHHHHHHCCCEEEEEeccCCe
Confidence 46789999999999999999766431 3678999999999999998888889
Q ss_pred EEEEEEc
Q 019861 324 VMFTATK 330 (334)
Q Consensus 324 ~~~~a~K 330 (334)
..++++|
T Consensus 248 ~~l~~~k 254 (254)
T 2nxc_A 248 VLLAYGR 254 (254)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 8888876
No 98
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.61 E-value=7e-15 Score=146.16 Aligned_cols=146 Identities=10% Similarity=0.075 Sum_probs=109.0
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhc--------------------C
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQ--------------------E 224 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~--------------------~ 224 (334)
.+.+.+.+...++.+|||||||+|.++..+++.+ +..+|+|+|+++.+++.|++++.. .
T Consensus 710 le~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d 789 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE 789 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS
T ss_pred HHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh
Confidence 4445555554568899999999999999999987 446999999999999999885431 1
Q ss_pred CCCCCCCceEEEeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHH-------H-----HHhhh
Q 019861 225 SNFPKDSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLL-------R-----QNMMQ 290 (334)
Q Consensus 225 ~~~~~~~fD~V~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~-------~-----~~~~~ 290 (334)
.++++++||+|++..+++|++++. .+++++.++|+|| .+++.+++.+.. ..+..+ . .....
T Consensus 790 Lp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN----~lF~~Lnp~tr~~dPd~~~~~~fR 864 (950)
T 3htx_A 790 FDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFN----TILQRSTPETQEENNSEPQLPKFR 864 (950)
T ss_dssp CCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGH----HHHTCC------------CCSSCS
T ss_pred CCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhh----hhhhhccccccccccccccccccc
Confidence 145568999999999999999876 5899999999999 999999886421 111100 0 01112
Q ss_pred hcCccCCCCHHHHHH----HHHhCCCcEEE
Q 019861 291 ISGSYTFLSEREIED----LCRACGLVDFK 316 (334)
Q Consensus 291 ~~~~~~~~t~~~l~~----ll~~~Gf~~v~ 316 (334)
...|...++.++++. ++++.||.+.-
T Consensus 865 h~DHrFEWTReEFr~Wae~LAer~GYsVef 894 (950)
T 3htx_A 865 NHDHKFEWTREQFNQWASKLGKRHNYSVEF 894 (950)
T ss_dssp CSSCSCCBCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccCcceeecHHHHHHHHHHHHHhcCcEEEE
Confidence 234566788999888 77788997654
No 99
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.59 E-value=1.3e-14 Score=124.39 Aligned_cols=106 Identities=25% Similarity=0.362 Sum_probs=86.8
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------------CCCCCC
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------------SNFPKD 230 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------------~~~~~~ 230 (334)
....+.+..++. ++.+|||+|||+|.++..+++.++ .+++|+|+++.+++.++++.... .+++++
T Consensus 30 ~~~~~~l~~~~~--~~~~vLdiGcG~G~~~~~l~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~ 106 (215)
T 2pxx_A 30 SSFRALLEPELR--PEDRILVLGCGNSALSYELFLGGF-PNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSA 106 (215)
T ss_dssp HHHHHHHGGGCC--TTCCEEEETCTTCSHHHHHHHTTC-CCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSS
T ss_pred HHHHHHHHHhcC--CCCeEEEECCCCcHHHHHHHHcCC-CcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCC
Confidence 344556666653 478999999999999999999875 38999999999999999876431 145678
Q ss_pred CceEEEeCccccCCC---------------CHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 231 SIDAVHAGAAIHCWS---------------SPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~---------------d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+||+|++..+++|+. ++..+|+++.++|+|||++++.+++.
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 999999999887765 56789999999999999999988764
No 100
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.59 E-value=1.1e-14 Score=121.18 Aligned_cols=120 Identities=21% Similarity=0.210 Sum_probs=94.7
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCC--CC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPK--DS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~--~~ 231 (334)
..+...+...++.+|||+|||+|.++..++...+..+++|+|+++.+++.+++++.... .+++ ++
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 94 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDN 94 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSC
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCC
Confidence 44555566667889999999999999999998666799999999999999998754321 2233 78
Q ss_pred ceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 232 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
||+|++..+++| ..+++++.++|+|||++++.+...+ +...+.+++++.|
T Consensus 95 ~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~~~~~~ 144 (178)
T 3hm2_A 95 PDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE--------------------------SEQMLWALRKQFG 144 (178)
T ss_dssp CSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH--------------------------HHHHHHHHHHHHC
T ss_pred CCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc--------------------------cHHHHHHHHHHcC
Confidence 999999999988 6689999999999999999776531 2346677788888
Q ss_pred CcEEE
Q 019861 312 LVDFK 316 (334)
Q Consensus 312 f~~v~ 316 (334)
+++..
T Consensus 145 ~~~~~ 149 (178)
T 3hm2_A 145 GTISS 149 (178)
T ss_dssp CEEEE
T ss_pred CeeEE
Confidence 86655
No 101
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.59 E-value=8.4e-15 Score=136.20 Aligned_cols=151 Identities=14% Similarity=0.096 Sum_probs=108.9
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-----cC--CCCCCCCceEEEeCccccCCCCHH-
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-----QE--SNFPKDSIDAVHAGAAIHCWSSPS- 248 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-----~~--~~~~~~~fD~V~~~~vl~h~~d~~- 248 (334)
+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++.-. .+ .+++ .||+|++.++|||++|+.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~v~~~~~d~~~~~~--~~D~v~~~~vlh~~~d~~~ 269 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGNENLNFVGGDMFKSIP--SADAVLLKWVLHDWNDEQS 269 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCCSSEEEEECCTTTCCC--CCSEEEEESCGGGSCHHHH
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccCCCcEEEeCccCCCCC--CceEEEEcccccCCCHHHH
Confidence 457999999999999999999988789999999 788877664100 00 1233 499999999999999987
Q ss_pred -HHHHHHHHcccC---CcEEEEEEeccCCCCCc--hHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEee-cC
Q 019861 249 -TGVAEISRVLRP---GGVFVGTTYIVDGPFNL--IPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR-NR 321 (334)
Q Consensus 249 -~~L~~i~r~Lkp---gG~lii~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~-~g 321 (334)
.+|++++++|+| ||++++.++........ ................+...++.++|.++++++||++++... .+
T Consensus 270 ~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~ 349 (358)
T 1zg3_A 270 LKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITPISG 349 (358)
T ss_dssp HHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEEETT
T ss_pred HHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEecCC
Confidence 999999999999 99999988876433221 011111111111111134567999999999999999988654 45
Q ss_pred cEEEEEEEc
Q 019861 322 GFVMFTATK 330 (334)
Q Consensus 322 ~~~~~~a~K 330 (334)
...++.+++
T Consensus 350 ~~~vie~~~ 358 (358)
T 1zg3_A 350 FKSLIEVYP 358 (358)
T ss_dssp TEEEEEEEC
T ss_pred CcEEEEEeC
Confidence 556666553
No 102
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.58 E-value=2.2e-14 Score=120.63 Aligned_cols=138 Identities=13% Similarity=0.191 Sum_probs=104.3
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFP 228 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~ 228 (334)
...+.+.+.+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.++++.... ..++
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc
Confidence 344566666666678899999999999999999884 49999999999999999876421 1234
Q ss_pred CCCceEEEeCccccC-CCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHH
Q 019861 229 KDSIDAVHAGAAIHC-WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h-~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 307 (334)
+++||+|++...++| ..+...+++++.++|+|||.+++.++... ..+++.+.+
T Consensus 117 ~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~l 170 (194)
T 1dus_A 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTKQ--------------------------GAKSLAKYM 170 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEESTH--------------------------HHHHHHHHH
T ss_pred cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCCC--------------------------ChHHHHHHH
Confidence 678999999988887 34567899999999999999999988642 123466666
Q ss_pred HhCCCcEEE-EeecCcEEEEEEEc
Q 019861 308 RACGLVDFK-CTRNRGFVMFTATK 330 (334)
Q Consensus 308 ~~~Gf~~v~-~~~~g~~~~~~a~K 330 (334)
++. |..++ ......+.++.++|
T Consensus 171 ~~~-~~~~~~~~~~~~~~~~~~~k 193 (194)
T 1dus_A 171 KDV-FGNVETVTIKGGYRVLKSKK 193 (194)
T ss_dssp HHH-HSCCEEEEEETTEEEEEEEC
T ss_pred HHH-hcceEEEecCCcEEEEEEee
Confidence 666 44444 33445677777776
No 103
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.58 E-value=2e-14 Score=120.69 Aligned_cols=121 Identities=20% Similarity=0.203 Sum_probs=96.3
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCC
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFP 228 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~ 228 (334)
......+...+...++.+|||+|||+|.++..++..+ .+++|+|+++.+++.+++++.... .++
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 96 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALC 96 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcc
Confidence 4444556666666778899999999999999999887 499999999999999998764321 123
Q ss_pred C-CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHH
Q 019861 229 K-DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 229 ~-~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 307 (334)
+ +.||+|++..+++| ...+++++.++|+|||.+++..+... +..++.+++
T Consensus 97 ~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~~--------------------------~~~~~~~~l 147 (192)
T 1l3i_A 97 KIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILLE--------------------------TKFEAMECL 147 (192)
T ss_dssp TSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBHH--------------------------HHHHHHHHH
T ss_pred cCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCcc--------------------------hHHHHHHHH
Confidence 3 68999999988764 58899999999999999999876521 245788899
Q ss_pred HhCCCcE
Q 019861 308 RACGLVD 314 (334)
Q Consensus 308 ~~~Gf~~ 314 (334)
++.||.+
T Consensus 148 ~~~g~~~ 154 (192)
T 1l3i_A 148 RDLGFDV 154 (192)
T ss_dssp HHTTCCC
T ss_pred HHCCCce
Confidence 9999943
No 104
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.58 E-value=7.2e-15 Score=130.42 Aligned_cols=145 Identities=21% Similarity=0.295 Sum_probs=104.0
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc--------CCCCCCCCceEEEeC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--------ESNFPKDSIDAVHAG 238 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--------~~~~~~~~fD~V~~~ 238 (334)
+.+..++. ++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++... ..++++++||+|++.
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEEC
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEc
Confidence 34444544 578999999999999999998865 999999999999999987541 124667899999999
Q ss_pred ccccCC-CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCc---hHHHHHHHHHhhhh--c--C-----ccCCCCHHHHHH
Q 019861 239 AAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IPFSRLLRQNMMQI--S--G-----SYTFLSEREIED 305 (334)
Q Consensus 239 ~vl~h~-~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~---~~~~~~~~~~~~~~--~--~-----~~~~~t~~~l~~ 305 (334)
.+++|+ +++..+|+++.++|+|||++++.+++....... .............. . . ...+++.+++.+
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 201 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDS 201 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSS
T ss_pred chhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHH
Confidence 887776 789999999999999999999999875310000 00000000001000 0 0 113789999988
Q ss_pred HHHhCCCcEEEEe
Q 019861 306 LCRACGLVDFKCT 318 (334)
Q Consensus 306 ll~~~Gf~~v~~~ 318 (334)
+ +||++++..
T Consensus 202 l---aGf~~~~~~ 211 (260)
T 2avn_A 202 L---EGFETVDIR 211 (260)
T ss_dssp C---TTEEEEEEE
T ss_pred h---cCceEEEEE
Confidence 8 999988754
No 105
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.57 E-value=5.9e-15 Score=123.02 Aligned_cols=153 Identities=8% Similarity=0.021 Sum_probs=111.7
Q ss_pred CCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CC
Q 019861 160 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NF 227 (334)
Q Consensus 160 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~ 227 (334)
+..+.....+..++.. +.+|||+|||+|.++..++...|..+|+++|+|+.|++.+++++...+ ..
T Consensus 34 p~ld~fY~~~~~~l~~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~ 111 (200)
T 3fzg_A 34 ATLNDFYTYVFGNIKH--VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDV 111 (200)
T ss_dssp GGHHHHHHHHHHHSCC--CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHH
T ss_pred HhHHHHHHHHHhhcCC--CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccC
Confidence 3445556667777754 789999999999999999998888899999999999999999876533 13
Q ss_pred CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHH
Q 019861 228 PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 228 ~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 307 (334)
+.++||+|++..+|||+.+....+.++.+.|+|||+++-- |... .....+ ...-.-.+.|++.+
T Consensus 112 ~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf-ptks-l~Gr~~--------------gm~~~Y~~~~~~~~ 175 (200)
T 3fzg_A 112 YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF-PIKS-LSGKEK--------------GMEENYQLWFESFT 175 (200)
T ss_dssp TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE-ECCC-CC--CT--------------TCCCCHHHHHHHHT
T ss_pred CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe-ChHH-hcCCCc--------------chhhhHHHHHHHhc
Confidence 4678999999999999977778888999999999866653 3221 100100 11111234566666
Q ss_pred HhCCCcEEEEeecCcEEEEEEEcC
Q 019861 308 RACGLVDFKCTRNRGFVMFTATKP 331 (334)
Q Consensus 308 ~~~Gf~~v~~~~~g~~~~~~a~K~ 331 (334)
...+.+++....|.-.+++.+|.
T Consensus 176 -~~~~~~~~~~~~~nEl~y~~~~~ 198 (200)
T 3fzg_A 176 -KGWIKILDSKVIGNELVYITSGF 198 (200)
T ss_dssp -TTTSCEEEEEEETTEEEEEECCC
T ss_pred -cCcceeeeeeeeCceEEEEEecc
Confidence 56677788877777777776664
No 106
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.56 E-value=1.3e-13 Score=117.99 Aligned_cols=119 Identities=18% Similarity=0.189 Sum_probs=93.7
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------C----C-CCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------N----F-PKD 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------~----~-~~~ 230 (334)
...+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.|+++..... . + ...
T Consensus 44 ~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 121 (204)
T 3njr_A 44 RALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLP 121 (204)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSC
T ss_pred HHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCC
Confidence 3445556666778899999999999999999884 499999999999999998764221 1 1 234
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
.||+|++...+ ++. +++++.++|+|||++++.....+ +..++.+++++.
T Consensus 122 ~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~--------------------------~~~~~~~~l~~~ 170 (204)
T 3njr_A 122 LPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE--------------------------SETLLTQLHARH 170 (204)
T ss_dssp CCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH--------------------------HHHHHHHHHHHH
T ss_pred CCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc--------------------------cHHHHHHHHHhC
Confidence 79999988754 566 99999999999999999776531 345778889999
Q ss_pred CCcEEEE
Q 019861 311 GLVDFKC 317 (334)
Q Consensus 311 Gf~~v~~ 317 (334)
|+++...
T Consensus 171 g~~i~~i 177 (204)
T 3njr_A 171 GGQLLRI 177 (204)
T ss_dssp CSEEEEE
T ss_pred CCcEEEE
Confidence 9987663
No 107
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.56 E-value=1.7e-14 Score=120.32 Aligned_cols=107 Identities=16% Similarity=0.143 Sum_probs=85.9
Q ss_pred cCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----------CCC---CCCCceEEEeCc
Q 019861 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------SNF---PKDSIDAVHAGA 239 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------~~~---~~~~fD~V~~~~ 239 (334)
++..++.+|||+|||. +++|+|+.|++.|+++.... .++ ++++||+|++..
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~ 71 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL 71 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC
Confidence 3456689999999986 13999999999999876421 133 788999999999
Q ss_pred cccCC-CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 240 AIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 240 vl~h~-~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
+++|+ +++..+|++++++|||||++++..+...... ......+.+++.++|+++||
T Consensus 72 ~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 72 VPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-----------------NNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp STTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-----------------SSSSSCCHHHHHHHHHHTTC
T ss_pred hhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-----------------cccccCCHHHHHHHHHHCCC
Confidence 99999 8999999999999999999999777543210 02234578999999999999
No 108
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.55 E-value=5.1e-14 Score=126.16 Aligned_cols=139 Identities=11% Similarity=0.068 Sum_probs=104.9
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKD 230 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~ 230 (334)
...+.+...+. .++.+|||+|||+|.++..++...+..+++|+|+|+.+++.++++..... +++++
T Consensus 97 ~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~ 175 (276)
T 2b3t_A 97 CLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQ 175 (276)
T ss_dssp HHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTC
T ss_pred HHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccC
Confidence 34455555554 45679999999999999999988667799999999999999998764211 23367
Q ss_pred CceEEEeC-------------ccccCCC------------CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHH
Q 019861 231 SIDAVHAG-------------AAIHCWS------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR 285 (334)
Q Consensus 231 ~fD~V~~~-------------~vl~h~~------------d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~ 285 (334)
+||+|+++ .+++|.+ +...+++++.++|+|||++++...
T Consensus 176 ~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~---------------- 239 (276)
T 2b3t_A 176 QFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG---------------- 239 (276)
T ss_dssp CEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC----------------
T ss_pred CccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC----------------
Confidence 89999998 4555544 346789999999999999998632
Q ss_pred HHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe--ecCcEEEEEEEc
Q 019861 286 QNMMQISGSYTFLSEREIEDLCRACGLVDFKCT--RNRGFVMFTATK 330 (334)
Q Consensus 286 ~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~--~~g~~~~~~a~K 330 (334)
+.+.+++.++++++||+.++.. ..|.--+++++|
T Consensus 240 -----------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 -----------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp -----------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred -----------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 2357789999999999876643 345555666654
No 109
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.55 E-value=2.5e-14 Score=128.11 Aligned_cols=121 Identities=18% Similarity=0.167 Sum_probs=94.4
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcC-C-------------CCCCCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE-S-------------NFPKDS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~-~-------------~~~~~~ 231 (334)
..+...+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.+++++... + ++++++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~ 179 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQM 179 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCC
Confidence 35556666777889999999999999999987 55569999999999999999887543 1 245678
Q ss_pred ceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 232 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
||+|++ |++++..+|+++.++|+|||++++.++... ..+++.+.+++.|
T Consensus 180 fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--------------------------~~~~~~~~l~~~G 228 (275)
T 1yb2_A 180 YDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD--------------------------QSEKTVLSLSASG 228 (275)
T ss_dssp EEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH--------------------------HHHHHHHHSGGGT
T ss_pred ccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------------------------HHHHHHHHHHHCC
Confidence 999998 678899999999999999999999886521 1346777788899
Q ss_pred CcEEEEe
Q 019861 312 LVDFKCT 318 (334)
Q Consensus 312 f~~v~~~ 318 (334)
|..++..
T Consensus 229 f~~~~~~ 235 (275)
T 1yb2_A 229 MHHLETV 235 (275)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9877643
No 110
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.55 E-value=3.2e-14 Score=125.99 Aligned_cols=103 Identities=14% Similarity=0.132 Sum_probs=86.1
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------CC--C---CCCc
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------NF--P---KDSI 232 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------~~--~---~~~f 232 (334)
.+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++..... .. + +++|
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~f 111 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHF 111 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCc
Confidence 34556667777789999999999999999999876 99999999999999999865421 12 1 4689
Q ss_pred eEEEeCccccCCCC--HHHHHHHHHHcccCCcEEEEEEecc
Q 019861 233 DAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 233 D~V~~~~vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|+|++..+++|+.. ...+++++.++| |||+++++....
T Consensus 112 D~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~g 151 (261)
T 3iv6_A 112 DFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKLG 151 (261)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEBS
T ss_pred cEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEeccC
Confidence 99999999999864 457999999999 999999987653
No 111
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.55 E-value=9.9e-15 Score=125.92 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=91.4
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc----C--------------CCCCCCCceEEE
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ----E--------------SNFPKDSIDAVH 236 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~----~--------------~~~~~~~fD~V~ 236 (334)
..++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.+.+.... . .+++++. |.|.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEE
Confidence 4567899999999999999999997777999999999988864322211 1 1344444 6665
Q ss_pred e---Cccc--cCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 237 A---GAAI--HCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 237 ~---~~vl--~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
. +..+ +|++++..+|++++++|||||++++........... +. ....+.....+..+.+..+++++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~l~~~l~~aG 175 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSV-PE-------VGEHPEPTPDSADEWLAPRYAEAG 175 (218)
T ss_dssp EESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBC-GG-------GTTCCCCCHHHHHHHHHHHHHHTT
T ss_pred EEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccc-cc-------cccCCccchHHHHHHHHHHHHHcC
Confidence 3 3334 388899999999999999999999966543211111 10 001011111122455888999999
Q ss_pred CcEEEEee
Q 019861 312 LVDFKCTR 319 (334)
Q Consensus 312 f~~v~~~~ 319 (334)
|++.+...
T Consensus 176 f~i~~~~~ 183 (218)
T 3mq2_A 176 WKLADCRY 183 (218)
T ss_dssp EEEEEEEE
T ss_pred CCceeeec
Confidence 99887543
No 112
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=7.8e-15 Score=128.31 Aligned_cols=94 Identities=12% Similarity=0.263 Sum_probs=74.5
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEe-Cc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHA-GA 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~-~~ 239 (334)
.++.+|||||||+|.++..+++.+. .+++|+|+|+.+++.|+++..... ++++++||+|++ .+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 3578999999999999999977653 489999999999999999764321 567889999999 55
Q ss_pred cc--c--CCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 240 AI--H--CWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 240 vl--~--h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
.+ + |..++..++++++++|||||++++.+..
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 53 1 2223447899999999999999986543
No 113
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.54 E-value=1.4e-13 Score=118.32 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=90.5
Q ss_pred cCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----------------CCCCCCCceEEE
Q 019861 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------------SNFPKDSIDAVH 236 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------------~~~~~~~fD~V~ 236 (334)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+.+..... .++ .++||+|+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~-~~~fD~V~ 131 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGI-VEKVDLIY 131 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTT-CCCEEEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhccc-ccceeEEE
Confidence 3445688999999999999999988754569999999998765544432211 122 37899999
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHH----HHHHhCCC
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE----DLCRACGL 312 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~----~ll~~~Gf 312 (334)
+.. .++ .+...++++++++|||||++++...... .....+.+++. +.++++ |
T Consensus 132 ~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~---------------------~~~~~~~~~~~~~~~~~l~~~-f 187 (210)
T 1nt2_A 132 QDI-AQK-NQIEILKANAEFFLKEKGEVVIMVKARS---------------------IDSTAEPEEVFKSVLKEMEGD-F 187 (210)
T ss_dssp ECC-CST-THHHHHHHHHHHHEEEEEEEEEEEEHHH---------------------HCTTSCHHHHHHHHHHHHHTT-S
T ss_pred Eec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCC---------------------ccccCCHHHHHHHHHHHHHhh-c
Confidence 972 222 2334569999999999999999864320 00112344432 237888 9
Q ss_pred cEEEEeecC----cEEEEEEEc
Q 019861 313 VDFKCTRNR----GFVMFTATK 330 (334)
Q Consensus 313 ~~v~~~~~g----~~~~~~a~K 330 (334)
++++..... .+++++++|
T Consensus 188 ~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 188 KIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp EEEEEEECTTTCTTEEEEEEEE
T ss_pred EEeeeecCCCCCCCcEEEEEEc
Confidence 999976552 456777765
No 114
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.54 E-value=9.4e-14 Score=115.35 Aligned_cols=112 Identities=12% Similarity=0.048 Sum_probs=89.2
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh---c--CCCCCCCCceEEEeCccccCCCCH---
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ---Q--ESNFPKDSIDAVHAGAAIHCWSSP--- 247 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~---~--~~~~~~~~fD~V~~~~vl~h~~d~--- 247 (334)
.++.+|||+|||+|.++..+++.+ +++|+|+|+.+++. ..+.. . ..++++++||+|+++..+++..++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~~ 97 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPII 97 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTTT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-ccCCeEEECChhhhcccCCCCEEEECCCCccCCccccc
Confidence 456799999999999999999887 99999999999987 11110 0 014456899999999888876655
Q ss_pred ------HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 248 ------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 248 ------~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
..+++++.+.| |||++++..+.. ...+++.++++++||+.+...
T Consensus 98 ~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------------------------~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 98 GGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------------------------NRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp BCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------------------------GCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCcchHHHHHHHHhhC-CCCEEEEEEecC--------------------------CCHHHHHHHHHHCCCcEEEEE
Confidence 57889999999 999999987653 146789999999999877643
No 115
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.54 E-value=1.7e-13 Score=119.06 Aligned_cols=130 Identities=12% Similarity=0.007 Sum_probs=96.3
Q ss_pred CCCCcEEEECCC-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCceEEEeCcc
Q 019861 176 VLGGNIIDASCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSIDAVHAGAA 240 (334)
Q Consensus 176 ~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD~V~~~~v 240 (334)
.++.+|||+||| +|.++..++... ..+|+|+|+++.+++.++++..... ++++++||+|+++-.
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 457899999999 999999999884 3499999999999999998765321 345689999999866
Q ss_pred ccCCCC-------------------HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHH
Q 019861 241 IHCWSS-------------------PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSER 301 (334)
Q Consensus 241 l~h~~d-------------------~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 301 (334)
+++..+ ...+++++.++|+|||++++..+... ...+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------------------------~~~~ 187 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------------------------KLLN 187 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------------------------HHHH
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------------------------hHHH
Confidence 554433 36789999999999999999876521 1246
Q ss_pred HHHHHHHhCCCcEEEEeec-C--cEEEEEEEcC
Q 019861 302 EIEDLCRACGLVDFKCTRN-R--GFVMFTATKP 331 (334)
Q Consensus 302 ~l~~ll~~~Gf~~v~~~~~-g--~~~~~~a~K~ 331 (334)
++.+++++.||++...... | ...++..+|.
T Consensus 188 ~~~~~l~~~g~~~~~~~~~~g~~~~~~l~f~~~ 220 (230)
T 3evz_A 188 VIKERGIKLGYSVKDIKFKVGTRWRHSLIFFKG 220 (230)
T ss_dssp HHHHHHHHTTCEEEEEEECCCC-CEEEEEEECC
T ss_pred HHHHHHHHcCCceEEEEecCCCeEEEEEEEecc
Confidence 8889999999976664322 2 3444444443
No 116
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.53 E-value=2.5e-14 Score=124.33 Aligned_cols=108 Identities=17% Similarity=0.204 Sum_probs=87.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc----------CCCCC-CCCceEEEeCccccCCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ----------ESNFP-KDSIDAVHAGAAIHCWS 245 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~----------~~~~~-~~~fD~V~~~~vl~h~~ 245 (334)
++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++... ..+++ +++||+|++. .
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~ 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------R 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE------S
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC------C
Confidence 478999999999999999999865 999999999999999987321 12455 7899999987 4
Q ss_pred CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 246 SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 246 d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
++..+|+++.++|||||+++ . .....+.+++.++++++||+++....
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~--~-------------------------~~~~~~~~~~~~~l~~~Gf~~~~~~~ 166 (226)
T 3m33_A 120 GPTSVILRLPELAAPDAHFL--Y-------------------------VGPRLNVPEVPERLAAVGWDIVAEDH 166 (226)
T ss_dssp CCSGGGGGHHHHEEEEEEEE--E-------------------------EESSSCCTHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEE--E-------------------------eCCcCCHHHHHHHHHHCCCeEEEEEe
Confidence 67788999999999999999 1 11234566888999999998876443
No 117
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=3.4e-13 Score=112.32 Aligned_cols=120 Identities=17% Similarity=0.194 Sum_probs=95.4
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCC
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPK 229 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~ 229 (334)
....+.+...+...++.+|||+|||+|.++..++.. ..+++|+|+++.+++.+++++.... ++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKR--CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDK 98 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTT--SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccC
Confidence 344455666666667889999999999999999983 4599999999999999998865321 2445
Q ss_pred CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHh
Q 019861 230 DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 309 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 309 (334)
++||+|++..+ .++..+++++.++ |||.+++.++..+ +..++.+++++
T Consensus 99 ~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~--------------------------~~~~~~~~l~~ 146 (183)
T 2yxd_A 99 LEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE--------------------------NAAKIINEFES 146 (183)
T ss_dssp CCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH--------------------------HHHHHHHHHHH
T ss_pred CCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc--------------------------cHHHHHHHHHH
Confidence 78999999988 6788999999998 9999999886531 24578889999
Q ss_pred CCCcEEE
Q 019861 310 CGLVDFK 316 (334)
Q Consensus 310 ~Gf~~v~ 316 (334)
+||.+..
T Consensus 147 ~g~~~~~ 153 (183)
T 2yxd_A 147 RGYNVDA 153 (183)
T ss_dssp TTCEEEE
T ss_pred cCCeEEE
Confidence 9986543
No 118
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.53 E-value=6.2e-14 Score=123.82 Aligned_cols=123 Identities=23% Similarity=0.351 Sum_probs=99.8
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcC--------------CCC
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE--------------SNF 227 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~--------------~~~ 227 (334)
......+...+...++.+|||+|||+|.++..++.. ++..+++++|+++.+++.|++++... ..+
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 158 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI 158 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc
Confidence 444556777777778899999999999999999998 76779999999999999999876421 135
Q ss_pred CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHH
Q 019861 228 PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 307 (334)
Q Consensus 228 ~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll 307 (334)
++++||+|++ +.+++..+++++.++|+|||++++..+..+ ..+++.+++
T Consensus 159 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~l 207 (255)
T 3mb5_A 159 EEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN--------------------------QVMRLHEKL 207 (255)
T ss_dssp CCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH--------------------------HHHHHHHHH
T ss_pred CCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH--------------------------HHHHHHHHH
Confidence 6788999998 567888999999999999999999876531 244677888
Q ss_pred HhCC--CcEEE
Q 019861 308 RACG--LVDFK 316 (334)
Q Consensus 308 ~~~G--f~~v~ 316 (334)
++.| |..++
T Consensus 208 ~~~g~~f~~~~ 218 (255)
T 3mb5_A 208 REFKDYFMKPR 218 (255)
T ss_dssp HHTGGGBSCCE
T ss_pred HHcCCCccccE
Confidence 8888 86665
No 119
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.52 E-value=1.9e-14 Score=131.27 Aligned_cols=136 Identities=17% Similarity=0.203 Sum_probs=99.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------------CC----CC--C
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------------SN----FP--K 229 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------------~~----~~--~ 229 (334)
++.+|||+|||+|.++..+++.+ ..+++|+|+++.+++.++++.... .+ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46799999999999999998753 469999999999999999875421 01 32 4
Q ss_pred CCceEEEeCccccCC-C---CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHH-------------hhh--
Q 019861 230 DSIDAVHAGAAIHCW-S---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN-------------MMQ-- 290 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~-~---d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~-------------~~~-- 290 (334)
++||+|++..++||+ . ++..+|+++.++|+|||.+++.+++.+. +...+... +..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~f~~~~ 186 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFE------LIRRLEASETESFGNEIYTVKFQKKG 186 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH------HHHHHTTSSSSEEECSSEEEEESCSS
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHH------HHHHHHhhccCccCCeeEEEEeCCCC
Confidence 589999999999887 3 4568999999999999999999986421 11100000 000
Q ss_pred ----------------hcCccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 291 ----------------ISGSYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 291 ----------------~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
.......++.+++.+++++.||+++....
T Consensus 187 ~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 187 DYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp CCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred CCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 00011246789999999999999988553
No 120
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.52 E-value=9.7e-14 Score=116.45 Aligned_cols=92 Identities=18% Similarity=0.218 Sum_probs=71.9
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeC-cc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAG-AA 240 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~-~v 240 (334)
++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|+++..... .+.+++||+|++. ..
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 47899999999999999999884 499999999999999998765311 1446789999987 33
Q ss_pred ccC-------C-CCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 241 IHC-------W-SSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 241 l~h-------~-~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+++ . .+...+|+++.++|||||++++....
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 332 1 23457899999999999999998764
No 121
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.52 E-value=6.5e-14 Score=125.43 Aligned_cols=123 Identities=11% Similarity=-0.000 Sum_probs=88.7
Q ss_pred HHHHHhHHHhhHhc--------CCCCcHH---HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHH
Q 019861 144 FIYERGWRQNFVWG--------GFPGPEK---EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSEN 212 (334)
Q Consensus 144 ~~~~~~w~~~~~~~--------~~~~~~~---~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~ 212 (334)
..++..|.+.+..+ .++.... ..+.-...+...++.+|||||||+|.++..+....+.++|+|+|+++.
T Consensus 78 ~~~E~~wa~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~ 157 (298)
T 3fpf_A 78 MKLEMEKAQEVIESDSPWETLRSFYFYPRYLELLKNEAALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPD 157 (298)
T ss_dssp HHHHHHHHHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHH
T ss_pred HHHHHHHHHHHhccCChHHhhccCCCcccHHHHHHHHHHHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHH
Confidence 44677777766332 2222222 222222345667799999999999977655444434569999999999
Q ss_pred HHHHHHHHHhcCC------------CCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 213 MLKQCYEFVQQES------------NFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 213 ~~~~a~~~~~~~~------------~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+++.|++++...+ .+++++||+|++... .+++..+++++.++|||||++++...
T Consensus 158 ~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 158 IAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp HHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred HHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9999998865321 244689999998665 57899999999999999999998764
No 122
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.52 E-value=1.8e-13 Score=120.91 Aligned_cols=123 Identities=19% Similarity=0.176 Sum_probs=98.2
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcC---C------------C
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE---S------------N 226 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~---~------------~ 226 (334)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+++.+++.+++++... . +
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~ 161 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAE 161 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCC
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence 334456666677777899999999999999999988 66679999999999999999876422 1 2
Q ss_pred CCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHH
Q 019861 227 FPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 306 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 306 (334)
+++++||+|++ +++++..+|+++.++|+|||++++.++... ...++.+.
T Consensus 162 ~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~ 210 (258)
T 2pwy_A 162 LEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT--------------------------QVLELVRA 210 (258)
T ss_dssp CCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH--------------------------HHHHHHHH
T ss_pred CCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH--------------------------HHHHHHHH
Confidence 56678999998 467888999999999999999999886521 13466677
Q ss_pred HHhCCCcEEE
Q 019861 307 CRACGLVDFK 316 (334)
Q Consensus 307 l~~~Gf~~v~ 316 (334)
+++.||..++
T Consensus 211 l~~~gf~~~~ 220 (258)
T 2pwy_A 211 AEAHPFRLER 220 (258)
T ss_dssp HTTTTEEEEE
T ss_pred HHHCCCceEE
Confidence 8889997765
No 123
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.50 E-value=3e-13 Score=119.80 Aligned_cols=134 Identities=14% Similarity=0.069 Sum_probs=97.5
Q ss_pred CCcEEEECCCc--CHHHHH-HHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------CCC-----------CCCce-
Q 019861 178 GGNIIDASCGS--GLFSRI-FAKSGLFSLVVALDYSENMLKQCYEFVQQES---------NFP-----------KDSID- 233 (334)
Q Consensus 178 ~~~vLDiGcG~--G~~~~~-l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------~~~-----------~~~fD- 233 (334)
..+|||||||. +.++.. +....+..+|+++|.|+.|++.|++++.... .+. .+.||
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~ 158 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDL 158 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCc
Confidence 46899999997 334444 4445667899999999999999999876421 111 24466
Q ss_pred ----EEEeCccccCCCC---HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHH
Q 019861 234 ----AVHAGAAIHCWSS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 306 (334)
Q Consensus 234 ----~V~~~~vl~h~~d---~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 306 (334)
+|+++.+|||+++ |..+|+++++.|+|||+|++++...+... .........+........+++.+++..+
T Consensus 159 ~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p---~~~~~~~~~~~~~g~p~~~rs~~ei~~~ 235 (277)
T 3giw_A 159 TRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAP---QEVGRVAREYAARNMPMRLRTHAEAEEF 235 (277)
T ss_dssp TSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSH---HHHHHHHHHHHHTTCCCCCCCHHHHHHT
T ss_pred CCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCH---HHHHHHHHHHHhcCCCCccCCHHHHHHH
Confidence 6889999999997 57899999999999999999998765321 1122222333222224577899999999
Q ss_pred HHhCCCcEEE
Q 019861 307 CRACGLVDFK 316 (334)
Q Consensus 307 l~~~Gf~~v~ 316 (334)
|. ||+.++
T Consensus 236 f~--Glelve 243 (277)
T 3giw_A 236 FE--GLELVE 243 (277)
T ss_dssp TT--TSEECT
T ss_pred hC--CCcccC
Confidence 94 998765
No 124
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.50 E-value=1.9e-13 Score=119.78 Aligned_cols=128 Identities=14% Similarity=0.005 Sum_probs=94.8
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCC---CCCceEEEeC
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFP---KDSIDAVHAG 238 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~---~~~fD~V~~~ 238 (334)
.++.+|||||||+|.++..++...+..+|+|+|+++.+++.++++..... +++ +++||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 35789999999999999999876666799999999999999988654211 222 5789999997
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
. +.++..+++++.++|+|||++++...... .. ..+++.+.+++.||++++..
T Consensus 149 ~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~-----~~-------------------~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 149 A----VARLSVLSELCLPLVKKNGLFVALKAASA-----EE-------------------ELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp C----CSCHHHHHHHHGGGEEEEEEEEEEECC-C-----HH-------------------HHHHHHHHHHHTTEEEEEEE
T ss_pred c----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc-----hH-------------------HHHHHHHHHHHcCCeEeEEE
Confidence 6 46789999999999999999988632110 00 13467788999999887643
Q ss_pred e------cCcEEEEEEEcC
Q 019861 319 R------NRGFVMFTATKP 331 (334)
Q Consensus 319 ~------~g~~~~~~a~K~ 331 (334)
. .+...+++.+|.
T Consensus 201 ~~~~~~~~~~~~l~~~~k~ 219 (240)
T 1xdz_A 201 SFKLPIEESDRNIMVIRKI 219 (240)
T ss_dssp EEECTTTCCEEEEEEEEEC
T ss_pred EEecCCCCCceEEEEEEec
Confidence 2 234455555553
No 125
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=3.6e-14 Score=121.41 Aligned_cols=139 Identities=17% Similarity=0.034 Sum_probs=86.3
Q ss_pred HHHHcccCC-CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCC----
Q 019861 167 ELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPK---- 229 (334)
Q Consensus 167 ~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~---- 229 (334)
+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+++.+++.+++++.... ++++
T Consensus 19 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 98 (215)
T 4dzr_A 19 EEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAER 98 (215)
T ss_dssp HHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhc
Confidence 344444443 56789999999999999999999776799999999999999988755321 2333
Q ss_pred -CCceEEEeCccc------cCCCCH--------------------HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHH
Q 019861 230 -DSIDAVHAGAAI------HCWSSP--------------------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR 282 (334)
Q Consensus 230 -~~fD~V~~~~vl------~h~~d~--------------------~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~ 282 (334)
++||+|+++..+ +|+... ..+++++.++|+|||++++.....
T Consensus 99 ~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------- 167 (215)
T 4dzr_A 99 GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH----------- 167 (215)
T ss_dssp TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT-----------
T ss_pred cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC-----------
Confidence 899999996433 332211 678899999999999944433321
Q ss_pred HHHHHhhhhcCccCCCCHHHHHHHHH--hCCCcEEEEe--ecCcEEEEEEEcC
Q 019861 283 LLRQNMMQISGSYTFLSEREIEDLCR--ACGLVDFKCT--RNRGFVMFTATKP 331 (334)
Q Consensus 283 ~~~~~~~~~~~~~~~~t~~~l~~ll~--~~Gf~~v~~~--~~g~~~~~~a~K~ 331 (334)
...+.+.++++ +.||..++.. ..|...++.++|.
T Consensus 168 ---------------~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 168 ---------------NQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTRE 205 (215)
T ss_dssp ---------------SCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEEC
T ss_pred ---------------ccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEc
Confidence 24667888999 9999776643 3344455555543
No 126
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.49 E-value=1.4e-14 Score=126.04 Aligned_cols=138 Identities=11% Similarity=0.093 Sum_probs=83.8
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCC-HHHHHHH---HHHHhcCC------------CCCCCCceEEEeCcc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYS-ENMLKQC---YEFVQQES------------NFPKDSIDAVHAGAA 240 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s-~~~~~~a---~~~~~~~~------------~~~~~~fD~V~~~~v 240 (334)
++.+|||||||+|.++..+++..+...|+|+|+| +.|++.| +++..... .+++..+|.|.+..+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 4779999999999999999977667799999999 7777776 54433211 233222344444333
Q ss_pred ccCC--------CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 241 IHCW--------SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 241 l~h~--------~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
...+ .++..+|++++++|||||.+++.....+.. ...+.... .... ....++..+++.++++++||
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~-~~~~~~~~---~~~~--~~~~~~~~~el~~~l~~aGf 177 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY-EEAEIKKR---GLPL--LSKAYFLSEQYKAELSNSGF 177 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------------CCHHHHHSHHHHHHHHHHTC
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc-hhchhhhc---CCCC--CChhhcchHHHHHHHHHcCC
Confidence 2211 234578999999999999999955433321 11110000 0000 01111222359999999999
Q ss_pred cEEEEeec
Q 019861 313 VDFKCTRN 320 (334)
Q Consensus 313 ~~v~~~~~ 320 (334)
++.+....
T Consensus 178 ~v~~~~~~ 185 (225)
T 3p2e_A 178 RIDDVKEL 185 (225)
T ss_dssp EEEEEEEE
T ss_pred Ceeeeeec
Confidence 98876543
No 127
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.49 E-value=1.8e-13 Score=115.41 Aligned_cols=96 Identities=16% Similarity=0.099 Sum_probs=80.2
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAGA 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~~ 239 (334)
.++.+|||+|||+|.++..++..+ ..+|+|+|+++.+++.++++..... .+++++||+|++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECC
Confidence 457899999999999999887765 3589999999999999998764321 13468999999998
Q ss_pred cccCC-CCHHHHHHHHHH--cccCCcEEEEEEeccC
Q 019861 240 AIHCW-SSPSTGVAEISR--VLRPGGVFVGTTYIVD 272 (334)
Q Consensus 240 vl~h~-~d~~~~L~~i~r--~LkpgG~lii~~~~~~ 272 (334)
.+++. .+...+++++.+ +|+|||++++..+...
T Consensus 122 p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 122 PYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 87775 577889999999 9999999999888754
No 128
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.48 E-value=2.9e-13 Score=116.42 Aligned_cols=94 Identities=17% Similarity=0.111 Sum_probs=76.3
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------C--CCCCCceEEEeCcc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------N--FPKDSIDAVHAGAA 240 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~--~~~~~fD~V~~~~v 240 (334)
++.+|||||||+|.++..++...+..+++|+|+++.+++.|+++..... + +++++||+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 4679999999999999999999877799999999999999998764211 1 55778999999865
Q ss_pred ccCCC--------CHHHHHHHHHHcccCCcEEEEEEec
Q 019861 241 IHCWS--------SPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 241 l~h~~--------d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
..+.. ....+++++.++|+|||.+++.+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 43322 1257999999999999999997653
No 129
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.47 E-value=1e-13 Score=120.96 Aligned_cols=130 Identities=15% Similarity=0.170 Sum_probs=89.5
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------CCCCCCCceEEEeCcccc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------SNFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------~~~~~~~fD~V~~~~vl~ 242 (334)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.++++.... ..++...+|.+.+..++.
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~ 114 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFI 114 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSS
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhh
Confidence 3567999999999999999999863 49999999999999887643210 112222467777766665
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhh--h--cCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ--I--SGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
++ ..+|++++++|||||.+++... +.....+..... . ..+.+..+.+++.++++++||+++...
T Consensus 115 ~l---~~~l~~i~rvLkpgG~lv~~~~---------p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 115 SL---DLILPPLYEILEKNGEVAALIK---------PQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp CG---GGTHHHHHHHSCTTCEEEEEEC---------HHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred hH---HHHHHHHHHhccCCCEEEEEEC---------cccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 54 6789999999999999998541 111111111100 0 012233478899999999999988754
No 130
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.47 E-value=5.4e-13 Score=119.84 Aligned_cols=132 Identities=17% Similarity=0.132 Sum_probs=96.5
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeC-CHHHHHHHHHHH-----hcC--------C-----
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY-SENMLKQCYEFV-----QQE--------S----- 225 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~-s~~~~~~a~~~~-----~~~--------~----- 225 (334)
+.+.+.......++.+|||+|||+|.++..++..+ ..+|+|+|+ ++.+++.++++. ... .
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~ 145 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVP 145 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEE
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEE
Confidence 34555555544567899999999999999998876 358999999 899999999887 211 0
Q ss_pred ----C----C----CCCCceEEEeCccccCCCCHHHHHHHHHHccc---C--CcEEEEEEeccCCCCCchHHHHHHHHHh
Q 019861 226 ----N----F----PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLR---P--GGVFVGTTYIVDGPFNLIPFSRLLRQNM 288 (334)
Q Consensus 226 ----~----~----~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~Lk---p--gG~lii~~~~~~~~~~~~~~~~~~~~~~ 288 (334)
. + ++++||+|++..+++|.++...+++.+.++|+ | ||++++...... +..
T Consensus 146 ~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~------~~~------- 212 (281)
T 3bzb_A 146 YRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR------PHL------- 212 (281)
T ss_dssp CCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC------------------
T ss_pred ecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee------ccc-------
Confidence 0 1 25789999999999999999999999999999 9 998877433211 000
Q ss_pred hhhcCccCCCCHHHHHHHHHhCC-CcEEEEe
Q 019861 289 MQISGSYTFLSEREIEDLCRACG-LVDFKCT 318 (334)
Q Consensus 289 ~~~~~~~~~~t~~~l~~ll~~~G-f~~v~~~ 318 (334)
......+.+.+++.| |++....
T Consensus 213 --------~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 213 --------AERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp -----------CTHHHHHHHHSTTEEEEEEE
T ss_pred --------chhHHHHHHHHHhcCCEEEEEec
Confidence 011246667888899 8877653
No 131
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.47 E-value=5.1e-13 Score=119.64 Aligned_cols=122 Identities=20% Similarity=0.260 Sum_probs=96.8
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES--------------NFP 228 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~ 228 (334)
.....+...+...++.+|||+|||+|.++..++.. ++..+++++|+++.+++.+++++.... .++
T Consensus 99 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 99 KDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 33456666677777889999999999999999988 666799999999999999998764321 245
Q ss_pred CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHH
Q 019861 229 KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 308 (334)
+++||+|++ +.+++..+++++.++|+|||++++.++... ...++.+.++
T Consensus 179 ~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~--------------------------~~~~~~~~l~ 227 (277)
T 1o54_A 179 EKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTTN--------------------------QVQETLKKLQ 227 (277)
T ss_dssp CCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSHH--------------------------HHHHHHHHHH
T ss_pred CCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------------------------HHHHHHHHHH
Confidence 678999998 457888999999999999999999886421 1245667777
Q ss_pred hCCCcEEE
Q 019861 309 ACGLVDFK 316 (334)
Q Consensus 309 ~~Gf~~v~ 316 (334)
+.||..++
T Consensus 228 ~~gf~~~~ 235 (277)
T 1o54_A 228 ELPFIRIE 235 (277)
T ss_dssp HSSEEEEE
T ss_pred HCCCceeE
Confidence 88887665
No 132
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.46 E-value=4.9e-13 Score=116.59 Aligned_cols=140 Identities=13% Similarity=0.085 Sum_probs=93.6
Q ss_pred ccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEE
Q 019861 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAV 235 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V 235 (334)
.+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.+.+...... ++.+++||+|
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEE
Confidence 444556889999999999999999987 355699999999887666655433211 1235789999
Q ss_pred EeCccccCCCCH-HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 236 HAGAAIHCWSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 236 ~~~~vl~h~~d~-~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
++... .++. ..++.++.++|+|||++++........... +. ...+. ++ .++|+++||++
T Consensus 152 ~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~-~~--------------~~~~~-~~-~~~l~~~Gf~~ 211 (233)
T 2ipx_A 152 FADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTA-SA--------------EAVFA-SE-VKKMQQENMKP 211 (233)
T ss_dssp EECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSS-CH--------------HHHHH-HH-HHTTGGGTEEE
T ss_pred EEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCC-CH--------------HHHHH-HH-HHHHHHCCCce
Confidence 99554 2233 456889999999999999965542100000 00 00111 23 48889999999
Q ss_pred EEEeecC----cEEEEEEEcC
Q 019861 315 FKCTRNR----GFVMFTATKP 331 (334)
Q Consensus 315 v~~~~~g----~~~~~~a~K~ 331 (334)
++..... .+.+++++++
T Consensus 212 ~~~~~~~~~~~~~~~v~~~~~ 232 (233)
T 2ipx_A 212 QEQLTLEPYERDHAVVVGVYR 232 (233)
T ss_dssp EEEEECTTTSSSEEEEEEEEC
T ss_pred EEEEecCCccCCcEEEEEEeC
Confidence 8855432 3677777664
No 133
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.46 E-value=3.5e-13 Score=115.37 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=81.6
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDS 231 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~ 231 (334)
...+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.+++++.... ..++++
T Consensus 66 ~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 143 (210)
T 3lbf_A 66 VARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAP 143 (210)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCC
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCC
Confidence 44556666667789999999999999999999854 99999999999999998865321 123578
Q ss_pred ceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
||+|++..+++|+++ ++.++|+|||++++..+.
T Consensus 144 ~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 144 FDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred ccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 999999999999986 588999999999998876
No 134
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.45 E-value=4.1e-13 Score=113.76 Aligned_cols=96 Identities=17% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeC
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAG 238 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~ 238 (334)
.++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.+++++.... .+.+++||+|++.
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 34789999999999999999887 345699999999999999998865421 1445789999987
Q ss_pred ccc---------cCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 239 AAI---------HCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 239 ~vl---------~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
..+ .+..++..+++++.++|+|||++++..+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 654 111134579999999999999999987654
No 135
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.45 E-value=1.5e-12 Score=115.39 Aligned_cols=136 Identities=17% Similarity=0.194 Sum_probs=98.9
Q ss_pred HHHcccCCC-CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------------CCCC
Q 019861 168 LMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------------NFPK 229 (334)
Q Consensus 168 ~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~~~ 229 (334)
.+..++... ++.+|||+|||+|.++..++..++ .+++|+|+++.+++.|++++.... .+++
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~ 117 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK-AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPK 117 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC-CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCT
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC-CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhcc
Confidence 344455555 688999999999999999999875 499999999999999998865321 1447
Q ss_pred CCceEEEeCccccC-----CC---------------CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhh
Q 019861 230 DSIDAVHAGAAIHC-----WS---------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM 289 (334)
Q Consensus 230 ~~fD~V~~~~vl~h-----~~---------------d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~ 289 (334)
++||+|+++-.+.+ .. +...+++.+.++|+|||++++..+.
T Consensus 118 ~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------------------- 178 (259)
T 3lpm_A 118 ERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP------------------- 178 (259)
T ss_dssp TCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-------------------
T ss_pred CCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-------------------
Confidence 89999999643322 21 2357899999999999999995432
Q ss_pred hhcCccCCCCHHHHHHHHHhCCCcEEEEeec-------CcEEEEEEEcC
Q 019861 290 QISGSYTFLSEREIEDLCRACGLVDFKCTRN-------RGFVMFTATKP 331 (334)
Q Consensus 290 ~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~-------g~~~~~~a~K~ 331 (334)
....++.+++++.||........ ....++.++|.
T Consensus 179 --------~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 179 --------ERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp --------TTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred --------HHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 14567888899999987663321 23556666664
No 136
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.45 E-value=6.1e-13 Score=114.57 Aligned_cols=94 Identities=15% Similarity=0.066 Sum_probs=75.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeCcc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAGAA 240 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~~v 240 (334)
++.+|||||||+|.++..+++..+..+++|+|+++.+++.|+++..... .+++++||.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 4679999999999999999998777899999999999999998765321 156788999987654
Q ss_pred ccCCCC--------HHHHHHHHHHcccCCcEEEEEEec
Q 019861 241 IHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 241 l~h~~d--------~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
..+... ...+|+++.++|+|||.+++.+.+
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 322211 257899999999999999998754
No 137
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.45 E-value=1.1e-13 Score=123.96 Aligned_cols=133 Identities=14% Similarity=0.125 Sum_probs=90.5
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-----CC--------CCCCCCceEEEeCcccc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-----ES--------NFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-----~~--------~~~~~~fD~V~~~~vl~ 242 (334)
.++.+|||||||+|.++..+++.+ ..+|+|+|+++.|++.+.+.... .. .++..+||+|++..+++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI 162 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS
T ss_pred ccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHh
Confidence 357799999999999999998885 35999999999999885442110 00 13445699999988877
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEEEe-ccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGTTY-IVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
++ ..+|.+++++|+|||.+++..- ..+.. ...... ..... ....+....+++.++++++||.+....
T Consensus 163 sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~---~~~~~~--~G~vr-d~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 163 SL---NLILPALAKILVDGGQVVALVKPQFEAG---REQIGK--NGIVR-ESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp CG---GGTHHHHHHHSCTTCEEEEEECGGGTSC---GGGCC---CCCCC-CHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hH---HHHHHHHHHHcCcCCEEEEEECcccccC---hhhcCC--CCccC-CHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 54 6789999999999999988632 11110 000000 00000 001233467899999999999987754
No 138
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.44 E-value=2.5e-12 Score=111.86 Aligned_cols=138 Identities=7% Similarity=0.015 Sum_probs=91.3
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEe
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHA 237 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~ 237 (334)
...++.+|||+|||+|.++..+++. ++.+.|+|+|+++.+++...+...... ....++||+|++
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEe
Confidence 4677899999999999999999876 556799999999988654432221100 011468999999
Q ss_pred CccccCCCCHHHHH-HHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEE
Q 019861 238 GAAIHCWSSPSTGV-AEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 316 (334)
Q Consensus 238 ~~vl~h~~d~~~~L-~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~ 316 (334)
.... ++....+ ..+.+.|||||+++++....... .. . .... ..++..+.|+++||++++
T Consensus 153 d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d-----------~t--~-~~~e---~~~~~~~~L~~~gf~~~~ 212 (232)
T 3id6_C 153 DIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSID-----------VT--K-DPKE---IYKTEVEKLENSNFETIQ 212 (232)
T ss_dssp CCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC--------------------C-CSSS---STTHHHHHHHHTTEEEEE
T ss_pred cCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcc-----------cC--C-CHHH---HHHHHHHHHHHCCCEEEE
Confidence 8653 5555544 55666999999999985432100 00 0 0011 113456778899999999
Q ss_pred EeecC----cEEEEEEEcC
Q 019861 317 CTRNR----GFVMFTATKP 331 (334)
Q Consensus 317 ~~~~g----~~~~~~a~K~ 331 (334)
..... .+++++++|.
T Consensus 213 ~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 213 IINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp EEECTTTCSSCEEEEEEEC
T ss_pred EeccCCCcCceEEEEEEeC
Confidence 77653 4677777764
No 139
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.44 E-value=7.8e-13 Score=120.13 Aligned_cols=132 Identities=13% Similarity=0.170 Sum_probs=96.2
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CC--------------CCCCCCceEEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ES--------------NFPKDSIDAVH 236 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~--------------~~~~~~fD~V~ 236 (334)
++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++.. .. ..++++||+|+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 46799999999999999999875556999999999999999987621 11 11467899999
Q ss_pred eCccccCCCCH----HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 237 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 237 ~~~vl~h~~d~----~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
+.....+.+.. ..++++++++|+|||++++...+... .....+++.+.++++||
T Consensus 175 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~----------------------~~~~~~~~~~~l~~~GF 232 (304)
T 3bwc_A 175 IDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL----------------------DLELIEKMSRFIRETGF 232 (304)
T ss_dssp EECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT----------------------CHHHHHHHHHHHHHHTC
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc----------------------chHHHHHHHHHHHhCCC
Confidence 97665554433 58899999999999999997654210 01135678899999999
Q ss_pred cEEEEee-------cCcEEEEEEEc
Q 019861 313 VDFKCTR-------NRGFVMFTATK 330 (334)
Q Consensus 313 ~~v~~~~-------~g~~~~~~a~K 330 (334)
..+.... .|.+..+.+.|
T Consensus 233 ~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 233 ASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp SEEEEEECCCTTSTTSCCEEEEEES
T ss_pred CcEEEEEeecccccCcceEEEEEeC
Confidence 8887542 35566666665
No 140
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.44 E-value=3.2e-12 Score=110.77 Aligned_cols=138 Identities=11% Similarity=0.094 Sum_probs=95.9
Q ss_pred ccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC----------C-----CCCCCceEE
Q 019861 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES----------N-----FPKDSIDAV 235 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~----------~-----~~~~~fD~V 235 (334)
.+...++.+|||+|||+|.++..+++. ++..+++|+|+++.+++.++++..... . ...++||+|
T Consensus 68 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 68 NFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred hcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEE
Confidence 334556889999999999999999977 455699999999999998887764321 1 113579999
Q ss_pred EeCccccCCCCH-HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcE
Q 019861 236 HAGAAIHCWSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 314 (334)
Q Consensus 236 ~~~~vl~h~~d~-~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~ 314 (334)
++... .++. ..+++++.++|+|||++++.......... .+. ..+..+++.++ +++ |++
T Consensus 148 ~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~---------------~~~~~~~l~~l-~~~-f~~ 206 (227)
T 1g8a_A 148 FEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVT-KEP---------------EQVFREVEREL-SEY-FEV 206 (227)
T ss_dssp EECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTT-SCH---------------HHHHHHHHHHH-HTT-SEE
T ss_pred EECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCC-CCh---------------hhhhHHHHHHH-Hhh-cee
Confidence 98654 2333 34599999999999999998433211100 000 11245677777 777 999
Q ss_pred EEEeecC----cEEEEEEEc
Q 019861 315 FKCTRNR----GFVMFTATK 330 (334)
Q Consensus 315 v~~~~~g----~~~~~~a~K 330 (334)
++..... .+.+++++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 207 IERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp EEEEECTTTSSSEEEEEEEC
T ss_pred eeEeccCcccCCCEEEEEEe
Confidence 8866533 267777776
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.44 E-value=3.8e-13 Score=114.78 Aligned_cols=122 Identities=16% Similarity=0.055 Sum_probs=91.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCccccC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGAAIHC 243 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~vl~h 243 (334)
++.+|||+|||+|.++..++...+..+++|+|+++.+++.++++..... ..++++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~---- 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRA---- 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSC----
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEec----
Confidence 3679999999999999999988666799999999999999998754321 12357899999864
Q ss_pred CCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe-----
Q 019861 244 WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT----- 318 (334)
Q Consensus 244 ~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~----- 318 (334)
+.++..+++++.++|+|||++++.... ...+++.++++ ||+.++..
T Consensus 141 ~~~~~~~l~~~~~~L~~gG~l~~~~~~---------------------------~~~~~~~~~~~--g~~~~~~~~~~~~ 191 (207)
T 1jsx_A 141 FASLNDMVSWCHHLPGEQGRFYALKGQ---------------------------MPEDEIALLPE--EYQVESVVKLQVP 191 (207)
T ss_dssp SSSHHHHHHHHTTSEEEEEEEEEEESS---------------------------CCHHHHHTSCT--TEEEEEEEEEECC
T ss_pred cCCHHHHHHHHHHhcCCCcEEEEEeCC---------------------------CchHHHHHHhc--CCceeeeeeeccC
Confidence 356789999999999999999986321 23556666655 99877622
Q ss_pred -ecCcEEEEEEEcC
Q 019861 319 -RNRGFVMFTATKP 331 (334)
Q Consensus 319 -~~g~~~~~~a~K~ 331 (334)
..+...++..+|.
T Consensus 192 ~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 192 ALDGERHLVVIKAN 205 (207)
T ss_dssp --CCEEEEEEEEEC
T ss_pred CCCCceEEEEEEec
Confidence 1344555555554
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.44 E-value=3.6e-13 Score=124.43 Aligned_cols=107 Identities=20% Similarity=0.269 Sum_probs=87.6
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------CCCCCCce
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------NFPKDSID 233 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~~~~~fD 233 (334)
..+.+.+.+...++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++.... .+.+++||
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD 263 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFD 263 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEE
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCee
Confidence 3455666665555779999999999999999999876799999999999999998865321 23467899
Q ss_pred EEEeCccccC-----CCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 234 AVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 234 ~V~~~~vl~h-----~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+|+++..+|+ ..+...+++++.++|+|||.+++..+..
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 9999998885 3355789999999999999999987653
No 143
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.43 E-value=1.9e-12 Score=120.89 Aligned_cols=106 Identities=19% Similarity=0.170 Sum_probs=84.6
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----------------CCCC
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------------SNFP 228 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------------~~~~ 228 (334)
..+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.++++.... .+++
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 344667777776778999999999999999999987789999999999999999876431 1355
Q ss_pred CCCceEEEeCccccCCC---CH--HHHHHHHHHcccCCcEEEEEEec
Q 019861 229 KDSIDAVHAGAAIHCWS---SP--STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~---d~--~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+++||+|+++-.+++.. +. ..+++++.++|+|||++++....
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 67999999998887632 22 36899999999999999997654
No 144
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.41 E-value=6e-13 Score=115.05 Aligned_cols=94 Identities=16% Similarity=0.112 Sum_probs=76.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------------CCCCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------------NFPKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~~~~~fD~V~~~~ 239 (334)
.+.+|||||||+|.++..+++..+...|+|+|+++.+++.|+++..... .+++++||.|++.+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 4679999999999999999999887899999999999999998765321 16788999999875
Q ss_pred cccCCCCH--------HHHHHHHHHcccCCcEEEEEEec
Q 019861 240 AIHCWSSP--------STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 240 vl~h~~d~--------~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
...+.... ..+++++.++|||||++++.+..
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 43322211 25899999999999999998764
No 145
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.40 E-value=3.8e-12 Score=109.93 Aligned_cols=133 Identities=10% Similarity=0.108 Sum_probs=99.6
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCC-
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKD- 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~- 230 (334)
.+.+..++++ +.+|||||||+|.++..++..++..+|+++|+++.+++.|+++....+ +++.+
T Consensus 6 L~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~ 83 (225)
T 3kr9_A 6 LELVASFVSQ--GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETD 83 (225)
T ss_dssp HHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCc
Confidence 3455666654 679999999999999999999877789999999999999999876432 23333
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
.||+|+....--. -...+|.+..+.|+++|++++.... ..+.++++|.+.
T Consensus 84 ~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~~----------------------------~~~~vr~~L~~~ 133 (225)
T 3kr9_A 84 QVSVITIAGMGGR--LIARILEEGLGKLANVERLILQPNN----------------------------REDDLRIWLQDH 133 (225)
T ss_dssp CCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEESS----------------------------CHHHHHHHHHHT
T ss_pred CCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEECCC----------------------------CHHHHHHHHHHC
Confidence 6999887543211 1356799999999999998884321 467899999999
Q ss_pred CCcEEEEe---ecCc-EEEEEEEc
Q 019861 311 GLVDFKCT---RNRG-FVMFTATK 330 (334)
Q Consensus 311 Gf~~v~~~---~~g~-~~~~~a~K 330 (334)
||.+++.. ..+. |-++.+.+
T Consensus 134 Gf~i~~e~lv~e~~~~Yeii~~~~ 157 (225)
T 3kr9_A 134 GFQIVAESILEEAGKFYEILVVEA 157 (225)
T ss_dssp TEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEEEEEECCEEEEEEEEEe
Confidence 99988843 3554 44555554
No 146
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.40 E-value=2.7e-12 Score=113.22 Aligned_cols=116 Identities=10% Similarity=-0.078 Sum_probs=89.5
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CC---CCCCceEEEe
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NF---PKDSIDAVHA 237 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~---~~~~fD~V~~ 237 (334)
..++.+|||||||+|..+..++...+..+|+++|+++.+++.++++..... +. .+++||+|++
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 345789999999999999999988777899999999999999998765321 11 2478999999
Q ss_pred CccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEE
Q 019861 238 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 317 (334)
Q Consensus 238 ~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~ 317 (334)
..+ .+...+++.+.++|+|||++++...... . . ..+++.+.++..||++.+.
T Consensus 158 ~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~~----~-~-------------------e~~~~~~~l~~~G~~~~~~ 209 (249)
T 3g89_A 158 RAV----APLCVLSELLLPFLEVGGAAVAMKGPRV----E-E-------------------ELAPLPPALERLGGRLGEV 209 (249)
T ss_dssp ESS----CCHHHHHHHHGGGEEEEEEEEEEECSCC----H-H-------------------HHTTHHHHHHHHTEEEEEE
T ss_pred CCc----CCHHHHHHHHHHHcCCCeEEEEEeCCCc----H-H-------------------HHHHHHHHHHHcCCeEEEE
Confidence 753 5678899999999999999988653210 0 0 1235677788899988774
Q ss_pred e
Q 019861 318 T 318 (334)
Q Consensus 318 ~ 318 (334)
.
T Consensus 210 ~ 210 (249)
T 3g89_A 210 L 210 (249)
T ss_dssp E
T ss_pred E
Confidence 4
No 147
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.40 E-value=6.5e-13 Score=122.32 Aligned_cols=102 Identities=17% Similarity=0.268 Sum_probs=79.1
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhc--------------CC----
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ--------------ES---- 225 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~--------------~~---- 225 (334)
....+...+...++.+|||+|||+|.++..++.. ++..+++|+|+++.+++.|++++.. ..
T Consensus 93 ~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~ 172 (336)
T 2b25_A 93 DINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFI 172 (336)
T ss_dssp HHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEE
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEE
Confidence 3455566666777899999999999999999987 6667999999999999999987652 10
Q ss_pred ---------CCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 226 ---------NFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 226 ---------~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++++++||+|++. .+++..+++++.++|+|||++++..+..
T Consensus 173 ~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 173 HKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp ESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred ECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 2345689999984 3566668999999999999999888754
No 148
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.39 E-value=6.4e-12 Score=108.72 Aligned_cols=133 Identities=11% Similarity=0.145 Sum_probs=99.3
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCC-C
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPK-D 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~-~ 230 (334)
.+.+..++++ +.+|||||||+|.++..++..++..+|+++|+++.+++.|++++...+ .+.. +
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~ 89 (230)
T 3lec_A 12 LQKVANYVPK--GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEAD 89 (230)
T ss_dssp HHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHhCCC--CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccccc
Confidence 4466667665 689999999999999999999876789999999999999999876432 1222 3
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
.||+|+.....-. -...+|.+..+.|+++|+++++... ..+.++++|.+.
T Consensus 90 ~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~----------------------------~~~~lr~~L~~~ 139 (230)
T 3lec_A 90 NIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPNN----------------------------REDDLRKWLAAN 139 (230)
T ss_dssp CCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS----------------------------CHHHHHHHHHHT
T ss_pred ccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECCC----------------------------ChHHHHHHHHHC
Confidence 7999886554221 1346788889999999998885532 367899999999
Q ss_pred CCcEEEEe---ecC-cEEEEEEEc
Q 019861 311 GLVDFKCT---RNR-GFVMFTATK 330 (334)
Q Consensus 311 Gf~~v~~~---~~g-~~~~~~a~K 330 (334)
||.+++.. ..+ .|-++.+.+
T Consensus 140 Gf~i~~E~lv~e~~~~Yeii~~~~ 163 (230)
T 3lec_A 140 DFEIVAEDILTENDKRYEILVVKH 163 (230)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEEE
T ss_pred CCEEEEEEEEEECCEEEEEEEEEe
Confidence 99998844 234 455666554
No 149
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.39 E-value=1.6e-12 Score=111.68 Aligned_cols=99 Identities=16% Similarity=0.167 Sum_probs=80.5
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcC-------------CCCC-CCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQE-------------SNFP-KDS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~-------------~~~~-~~~ 231 (334)
..+...+...++.+|||||||+|.++..+++.+ +..+++++|+++.+++.+++++... ..++ +++
T Consensus 67 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 146 (215)
T 2yxe_A 67 GMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAP 146 (215)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCC
T ss_pred HHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCC
Confidence 345555666678899999999999999998875 4469999999999999999875421 1233 568
Q ss_pred ceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 232 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
||+|++..+++|++ +++.++|+|||++++..+..
T Consensus 147 fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 147 YDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred eeEEEECCchHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 99999999999986 47899999999999988754
No 150
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.39 E-value=2.2e-12 Score=112.07 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=81.3
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------CC-CCCCce
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------NF-PKDSID 233 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~-~~~~fD 233 (334)
.+.+...+...++.+|||||||+|.++..++..+. +++|+|+++.+++.++++..... .+ .+++||
T Consensus 59 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD 136 (231)
T 1vbf_A 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYD 136 (231)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEE
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcC--EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCcc
Confidence 44555666666788999999999999999999874 99999999999999998865321 12 357899
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+|++..+++|+. .++.++|+|||++++..+..
T Consensus 137 ~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 137 RVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp EEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred EEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 999999999986 36899999999999988764
No 151
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.39 E-value=9.4e-13 Score=108.54 Aligned_cols=93 Identities=15% Similarity=0.158 Sum_probs=75.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-C-----------C-----CCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-N-----------F-----PKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-~-----------~-----~~~~fD~V~~~~ 239 (334)
++.+|||+|||+|.++..++..++ .++|+|+++.+++.++++..... . . ..++||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 477999999999999999999987 69999999999999998765321 0 0 123799999997
Q ss_pred cccCCCCHHHHHHHHH--HcccCCcEEEEEEeccCC
Q 019861 240 AIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVDG 273 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~--r~LkpgG~lii~~~~~~~ 273 (334)
.++ .+...+++.+. ++|+|||++++..+....
T Consensus 119 ~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 119 PYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred CCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 765 55566777777 999999999998887653
No 152
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.38 E-value=6.8e-12 Score=112.44 Aligned_cols=122 Identities=14% Similarity=0.080 Sum_probs=92.8
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCce
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSID 233 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD 233 (334)
.+...+. ++.+|||+|||+|.++..++..+.. +|+|+|+|+.+++.|+++..... ...+++||
T Consensus 118 ~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD 194 (278)
T 2frn_A 118 RMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIAD 194 (278)
T ss_dssp HHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEE
T ss_pred HHHHhCC--CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCcc
Confidence 3444443 4789999999999999999998863 79999999999999998765321 12257899
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
+|++... .+...++.++.++|+|||++++.+..... ....-..+.+.+.++++||+
T Consensus 195 ~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--------------------~~~~~~~~~i~~~~~~~G~~ 250 (278)
T 2frn_A 195 RILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK--------------------LMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp EEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--------------------GTTTTTHHHHHHHHHHTTCE
T ss_pred EEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccc--------------------cccccHHHHHHHHHHHcCCe
Confidence 9998543 34567899999999999999998876421 11112467889999999997
Q ss_pred EEE
Q 019861 314 DFK 316 (334)
Q Consensus 314 ~v~ 316 (334)
+..
T Consensus 251 ~~~ 253 (278)
T 2frn_A 251 VEK 253 (278)
T ss_dssp EEE
T ss_pred eEE
Confidence 654
No 153
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.38 E-value=2.9e-12 Score=114.59 Aligned_cols=104 Identities=20% Similarity=0.260 Sum_probs=85.0
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcC-----------------
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE----------------- 224 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~----------------- 224 (334)
......+...+...++.+|||+|||+|.++..++.. ++..+++++|+++.+++.+++++...
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 334456666677777889999999999999999985 55669999999999999999876422
Q ss_pred CCCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 225 SNFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 225 ~~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.++++++||+|++ +++++..+|+++.++|+|||++++.++..
T Consensus 165 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 165 SELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred cCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 1245678999998 56788899999999999999999988753
No 154
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.4e-12 Score=120.69 Aligned_cols=93 Identities=17% Similarity=0.283 Sum_probs=75.7
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeCc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAGA 239 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~~ 239 (334)
..++.+|||||||+|.++..+++.+ ..+|+|+|+| .+++.|+++..... ++++++||+|++..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 3457899999999999999999985 4699999999 59999998765321 45678999999966
Q ss_pred c---ccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 240 A---IHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 240 v---l~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+ +.+..++..+++++.++|||||+++....
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred ccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 5 44557889999999999999999875433
No 155
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.37 E-value=3.3e-12 Score=119.37 Aligned_cols=93 Identities=20% Similarity=0.268 Sum_probs=79.0
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCcccc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~vl~ 242 (334)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++.... ..++++||+|+++..++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~ 309 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFH 309 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchh
Confidence 3578999999999999999999865 99999999999999999875422 23347999999999988
Q ss_pred C-----CCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 243 C-----WSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 243 h-----~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+ ..+...+++++.++|+|||++++....
T Consensus 310 ~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 310 VGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred hcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 8 345678999999999999999997654
No 156
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.36 E-value=3.2e-12 Score=107.01 Aligned_cols=107 Identities=18% Similarity=0.098 Sum_probs=81.4
Q ss_pred HHHHHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------------
Q 019861 164 KEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------- 225 (334)
Q Consensus 164 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------- 225 (334)
...+.+...+. ..++.+|||+|||+|.++..++..+ ..+++|+|+++.+++.++++.....
T Consensus 30 ~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 108 (187)
T 2fhp_A 30 KVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALE 108 (187)
T ss_dssp HHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHH
Confidence 33444444443 2457899999999999999888764 3599999999999999998764211
Q ss_pred --CCCCCCceEEEeCccccCCCCHHHHHHHH--HHcccCCcEEEEEEeccC
Q 019861 226 --NFPKDSIDAVHAGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 226 --~~~~~~fD~V~~~~vl~h~~d~~~~L~~i--~r~LkpgG~lii~~~~~~ 272 (334)
+..+++||+|++...++ ..+....++.+ .++|+|||++++..+...
T Consensus 109 ~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 109 QFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 01267899999987744 45677778888 889999999999888754
No 157
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.36 E-value=2.8e-12 Score=118.32 Aligned_cols=97 Identities=21% Similarity=0.331 Sum_probs=78.5
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CCCCCCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SNFPKDS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~~~~~~ 231 (334)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|++++... .++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 131 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEK 131 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCc
Confidence 345555555668899999999999999999886 35999999996 999998876432 1355679
Q ss_pred ceEEEeCc---cccCCCCHHHHHHHHHHcccCCcEEE
Q 019861 232 IDAVHAGA---AIHCWSSPSTGVAEISRVLRPGGVFV 265 (334)
Q Consensus 232 fD~V~~~~---vl~h~~d~~~~L~~i~r~LkpgG~li 265 (334)
||+|++.. .+.|..++..+|+++.++|||||+++
T Consensus 132 ~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 132 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 99999866 56676778889999999999999988
No 158
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.35 E-value=2.9e-12 Score=117.07 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=81.3
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES--------------NFPKD 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~ 230 (334)
...+.+.+...++.+|||||||+|.++..+++.+. ..+|+|+|+++.+++.+++++.... ..+++
T Consensus 64 ~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~ 143 (317)
T 1dl5_A 64 MALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFS 143 (317)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGC
T ss_pred HHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCC
Confidence 34555666667789999999999999999998866 3579999999999999998865321 12357
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+||+|++..+++|+. +++.+.|||||++++.....
T Consensus 144 ~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 144 PYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCBG
T ss_pred CeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECCC
Confidence 899999999999987 57889999999999976543
No 159
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.35 E-value=1.9e-12 Score=107.65 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=79.0
Q ss_pred HHHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCC
Q 019861 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPK 229 (334)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~ 229 (334)
+.+...+. ..++.+|||+|||+|.++..++..+ ..+++|+|+++.+++.+++++.... +..+
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 98 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLT 98 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBC
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhc
Confidence 34444444 3457899999999999999998874 4599999999999999998875431 1123
Q ss_pred CCceEEEeCccccCCCCHHHHHHHHH--HcccCCcEEEEEEeccC
Q 019861 230 DSIDAVHAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~~d~~~~L~~i~--r~LkpgG~lii~~~~~~ 272 (334)
+.||+|++...+++ .+...+++.+. ++|+|||++++......
T Consensus 99 ~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 99 GRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp SCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred CCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 67999999866532 34456777777 99999999999888754
No 160
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.35 E-value=2.8e-12 Score=105.90 Aligned_cols=96 Identities=20% Similarity=0.194 Sum_probs=75.0
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhc-C---CC--------CCCCCceEEEeCccc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ-E---SN--------FPKDSIDAVHAGAAI 241 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~-~---~~--------~~~~~fD~V~~~~vl 241 (334)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++..+-.+.. + .+ +++++||+|++...+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~ 98 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAP 98 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccccCcEEEEEcccccchhhhhhhccCCCCceeEEEECCCc
Confidence 456789999999999999999988 5557999999998 65431100000 0 01 456789999999999
Q ss_pred cCCCCH-----------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 242 HCWSSP-----------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 242 ~h~~d~-----------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++..++ ..+++++.++|+|||.+++.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 99 NMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 988876 689999999999999999988764
No 161
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.34 E-value=2.8e-12 Score=112.09 Aligned_cols=94 Identities=18% Similarity=0.158 Sum_probs=72.5
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc--------CC-------------C--CCCCCce
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--------ES-------------N--FPKDSID 233 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--------~~-------------~--~~~~~fD 233 (334)
++.+|||||||+|.++..+++..+...++|+|+++.+++.|++++.. .. + +++++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 45689999999999999999998778999999999999999876431 00 1 4578999
Q ss_pred EEEeCccccCCCC--------HHHHHHHHHHcccCCcEEEEEEec
Q 019861 234 AVHAGAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 234 ~V~~~~vl~h~~d--------~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
.|++.....+... ...+|+++.++|+|||.+++.+..
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 9987543222110 136899999999999999998765
No 162
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.34 E-value=4.5e-12 Score=108.12 Aligned_cols=93 Identities=8% Similarity=0.012 Sum_probs=75.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeCccc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAGAAI 241 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~~vl 241 (334)
++.+|||+|||+|.++..++..+. .+|+|+|+++.+++.++++..... +..+++||+|++...+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 467999999999999998777763 489999999999999998765321 2345789999998773
Q ss_pred cCCCCHHHHHHHHHH--cccCCcEEEEEEecc
Q 019861 242 HCWSSPSTGVAEISR--VLRPGGVFVGTTYIV 271 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r--~LkpgG~lii~~~~~ 271 (334)
|..+...+++.+.+ +|+|||++++.....
T Consensus 133 -~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 133 -RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp -STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred -CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 45677888999876 599999999987764
No 163
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.34 E-value=1.9e-12 Score=115.53 Aligned_cols=90 Identities=16% Similarity=0.258 Sum_probs=71.7
Q ss_pred CCCcEEEECCCcCH----HHHHHHHc-CC---CCeEEEEeCCHHHHHHHHHHHh------------------------c-
Q 019861 177 LGGNIIDASCGSGL----FSRIFAKS-GL---FSLVVALDYSENMLKQCYEFVQ------------------------Q- 223 (334)
Q Consensus 177 ~~~~vLDiGcG~G~----~~~~l~~~-~~---~~~v~giD~s~~~~~~a~~~~~------------------------~- 223 (334)
++.+|||+|||+|. ++..+++. +. ..+|+|+|+|+.+++.|++..- .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 55556654 21 2489999999999999997530 0
Q ss_pred --------------------CCCCC-CCCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEE
Q 019861 224 --------------------ESNFP-KDSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVG 266 (334)
Q Consensus 224 --------------------~~~~~-~~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii 266 (334)
..+++ .++||+|+|.++++|+.++ ..++++++++|+|||++++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 01243 4689999999999999866 6899999999999999988
No 164
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.34 E-value=3.8e-12 Score=111.04 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=80.3
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCC-CCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPK-DSI 232 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~-~~f 232 (334)
..+.+.+...++.+|||||||+|.++..+++.++ .+|+++|+++.+++.+++++.... ++++ ..|
T Consensus 81 ~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 159 (235)
T 1jg1_A 81 AIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPY 159 (235)
T ss_dssp HHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCE
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCc
Confidence 3445555666788999999999999999999874 599999999999999998765321 2333 359
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
|+|++..+++++.+ ++.+.|+|||++++..+...
T Consensus 160 D~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 160 DVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp EEEEECSBBSSCCH------HHHHTEEEEEEEEEEECSSS
T ss_pred cEEEECCcHHHHHH------HHHHhcCCCcEEEEEEecCC
Confidence 99999999998863 68899999999999888653
No 165
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.34 E-value=2.5e-12 Score=109.70 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=75.0
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------------C-CCCCC-ceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------------N-FPKDS-IDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~-~~~~~-fD~V~~ 237 (334)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.+++.|++++.... + +++++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 467999999999999998777763 589999999999999998764211 1 12567 999999
Q ss_pred CccccCCCCHHHHHHHH--HHcccCCcEEEEEEecc
Q 019861 238 GAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 238 ~~vl~h~~d~~~~L~~i--~r~LkpgG~lii~~~~~ 271 (334)
...++ ..+...+++.+ .++|+|||.+++.....
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 88743 56777889999 67899999999987764
No 166
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.33 E-value=1.7e-12 Score=112.28 Aligned_cols=103 Identities=12% Similarity=0.149 Sum_probs=79.6
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCC-----------------CCC-
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES-----------------NFP- 228 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~~- 228 (334)
.+...+...++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.... .+.
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~ 128 (221)
T 3u81_A 49 IMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKK 128 (221)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTT
T ss_pred HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHH
Confidence 33333333456899999999999999999863 35699999999999999998754311 112
Q ss_pred ---CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 229 ---KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 229 ---~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.++||+|++....++..+...++..+ ++|+|||++++.+...
T Consensus 129 ~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 129 KYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp TSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred hcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 26899999999888877777778888 9999999999865543
No 167
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.32 E-value=1.2e-11 Score=107.97 Aligned_cols=134 Identities=11% Similarity=0.096 Sum_probs=99.4
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCC-
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKD- 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~- 230 (334)
.+.+..++.+ +.+|||||||+|.++..++..++...|+++|+++.+++.|++++...+ .+..+
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~ 89 (244)
T 3gnl_A 12 LEKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKD 89 (244)
T ss_dssp HHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccc
Confidence 4466677665 689999999999999999999876689999999999999999876432 12233
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhC
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 310 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~ 310 (334)
.||+|+.....-. -...+|.+..+.|+++|++++.... ..+.++++|.+.
T Consensus 90 ~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~----------------------------~~~~lr~~L~~~ 139 (244)
T 3gnl_A 90 AIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPNI----------------------------AAWQLREWSEQN 139 (244)
T ss_dssp CCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS----------------------------CHHHHHHHHHHH
T ss_pred cccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcCC----------------------------ChHHHHHHHHHC
Confidence 5999886543221 1345788999999999998885431 366899999999
Q ss_pred CCcEEEEe---ecC-cEEEEEEEcC
Q 019861 311 GLVDFKCT---RNR-GFVMFTATKP 331 (334)
Q Consensus 311 Gf~~v~~~---~~g-~~~~~~a~K~ 331 (334)
||.+++.. ..+ .|-++.+.+.
T Consensus 140 Gf~i~~E~lv~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 140 NWLITSEAILREDNKVYEIMVLAPS 164 (244)
T ss_dssp TEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEEEEEEECCEEEEEEEEEeC
Confidence 99987733 344 4445555543
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.32 E-value=2.2e-11 Score=107.18 Aligned_cols=95 Identities=14% Similarity=0.133 Sum_probs=76.1
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC-----------------CC-CCCCceE
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES-----------------NF-PKDSIDA 234 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~-~~~~fD~ 234 (334)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.... .+ ..++||+
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 334578999999999999999999855 5799999999999999998875321 11 1348999
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|++... ..+...+++++.++|+|||++++.....
T Consensus 140 V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 140 IFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp EEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 998763 3355678999999999999999876654
No 169
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.32 E-value=3.6e-11 Score=106.62 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=79.5
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---CC-------------C-----
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ES-------------N----- 226 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~-------------~----- 226 (334)
.+..++...++.+|||+|||+|.++..++..++..+++|+|+++.+++.|++++.. .. .
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~ 106 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKAR 106 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhh
Confidence 34455555667899999999999999999998767999999999999999998654 21 1
Q ss_pred ----CCCCCceEEEeCcccc----------------C--CCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 227 ----FPKDSIDAVHAGAAIH----------------C--WSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 227 ----~~~~~fD~V~~~~vl~----------------h--~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+++++||+|+++--.. | ..+...+++.+.++|+|||++++..+
T Consensus 107 ~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 107 VEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 2467899999972211 1 12467889999999999999998654
No 170
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.32 E-value=2.3e-12 Score=119.75 Aligned_cols=108 Identities=10% Similarity=0.057 Sum_probs=83.6
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh---------cC--C-------
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ---------QE--S------- 225 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~---------~~--~------- 225 (334)
.....+...+...++.+|||||||+|.++..++...+..+++|+|+++.+++.|+++.. +. .
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 34555666677778999999999999999999876544469999999999999886431 10 1
Q ss_pred C-----CCC--CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 226 N-----FPK--DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 226 ~-----~~~--~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
. +++ ..||+|+++..+ +.++....|.++.++|||||+|++.+....
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 1 111 479999998765 457888999999999999999999876653
No 171
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.32 E-value=5.9e-12 Score=118.92 Aligned_cols=107 Identities=10% Similarity=0.023 Sum_probs=83.3
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHH-------HHHHhcCC-----------
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQC-------YEFVQQES----------- 225 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a-------~~~~~~~~----------- 225 (334)
.....+.+.+...++.+|||||||+|.++..++...+..+|+|+|+++.+++.| ++++...+
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~g 308 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEES
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEc
Confidence 344556666677778999999999999999999875445899999999998888 66543211
Q ss_pred -CC--------CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 226 -NF--------PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 226 -~~--------~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.+ ..++||+|+++.++ +.+++..+|+++.++|||||++++..+..
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred CccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 12 13679999998776 44677889999999999999999976544
No 172
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.32 E-value=1.3e-11 Score=107.48 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=80.4
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCC---
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFP--- 228 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~--- 228 (334)
...+...+...++.+|||||||+|..+..++...+..+|+++|+++.+++.|++++.... ..+
T Consensus 60 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 139 (232)
T 3ntv_A 60 LDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN 139 (232)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT
T ss_pred HHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc
Confidence 334444444445789999999999999999997667799999999999999998865321 122
Q ss_pred CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 229 KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+++||+|++... ..+...+++++.++|+|||++++.....
T Consensus 140 ~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 140 DKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp TSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred cCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 578999997654 4456789999999999999998855544
No 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.31 E-value=7.9e-12 Score=116.85 Aligned_cols=101 Identities=19% Similarity=0.263 Sum_probs=80.0
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~ 231 (334)
+.+.......++.+|||||||+|.++..+++.+. .+|+|+|++ .+++.|++++.... +++ ++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~ 129 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EK 129 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SC
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-Cc
Confidence 4455555566788999999999999999999863 599999999 99999998765321 233 78
Q ss_pred ceEEEeCccccCC---CCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 232 IDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~---~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
||+|++..+.+++ .++..+++++.++|+|||++++....
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 9999996644444 56788999999999999999875543
No 174
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.30 E-value=1.4e-12 Score=115.06 Aligned_cols=131 Identities=13% Similarity=0.045 Sum_probs=84.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------------CCC---CCCceEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------------NFP---KDSIDAV 235 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------------~~~---~~~fD~V 235 (334)
++.+|||+|||+|.++..++...+..+++|+|+++.+++.|+++..... +++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 4679999999999999888877444699999999999999998764211 233 2589999
Q ss_pred EeCccccCCC--------------CH-HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhh----cCccC
Q 019861 236 HAGAAIHCWS--------------SP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI----SGSYT 296 (334)
Q Consensus 236 ~~~~vl~h~~--------------d~-~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 296 (334)
+++-..++.. .| ..++.+++++|||||.+.+.... ........... ..+..
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~----------~~~~~~~l~~~g~~~~~~~~ 214 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI----------IHDSLQLKKRLRWYSCMLGK 214 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHHHHH----------HHHHHHHGGGBSCEEEEESS
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH----------HHHHHhcccceEEEEECCCC
Confidence 9984443322 11 24578899999999987664321 11111111110 11222
Q ss_pred CCCHHHHHHHHHhCCCcEEEE
Q 019861 297 FLSEREIEDLCRACGLVDFKC 317 (334)
Q Consensus 297 ~~t~~~l~~ll~~~Gf~~v~~ 317 (334)
..+.+++.++++++||+.++.
T Consensus 215 ~~~~~~~~~~l~~~Gf~~v~~ 235 (254)
T 2h00_A 215 KCSLAPLKEELRIQGVPKVTY 235 (254)
T ss_dssp TTSHHHHHHHHHHTTCSEEEE
T ss_pred hhHHHHHHHHHHHcCCCceEE
Confidence 334588999999999988763
No 175
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.29 E-value=4.1e-11 Score=103.40 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=78.5
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCCC-----------------CC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESN-----------------FP 228 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~-----------------~~ 228 (334)
..+...+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.+++++..... ++
T Consensus 48 ~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 48 KFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 3333333334578999999999999999999855 56999999999999999988753220 00
Q ss_pred ---CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 229 ---KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 229 ---~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.++||+|++..... +...+++++.++|+|||++++.....
T Consensus 128 ~~~~~~fD~v~~d~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 128 NEKYEPFDFIFIDADKQ---NNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HTTCCCCSEEEECSCGG---GHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred hcCCCCcCEEEEcCCcH---HHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 16799999876633 45688999999999999998876654
No 176
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.29 E-value=1.3e-11 Score=108.68 Aligned_cols=103 Identities=15% Similarity=0.057 Sum_probs=75.8
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHc--CCCCeEEEEeCCHHHHHHHHHHHhcC---------------------
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQE--------------------- 224 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~giD~s~~~~~~a~~~~~~~--------------------- 224 (334)
.+...+...++.+|||+|||+|.++..++.. .+..+++|+|+|+.+++.|++++...
T Consensus 42 ~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (250)
T 1o9g_A 42 RALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGK 121 (250)
T ss_dssp HHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhccc
Confidence 3344444345679999999999999999887 44458999999999999998543211
Q ss_pred ----------------------------------CCC------CCCCceEEEeCccccCCCC---------HHHHHHHHH
Q 019861 225 ----------------------------------SNF------PKDSIDAVHAGAAIHCWSS---------PSTGVAEIS 255 (334)
Q Consensus 225 ----------------------------------~~~------~~~~fD~V~~~~vl~h~~d---------~~~~L~~i~ 255 (334)
... ..++||+|+++..+.+..+ ...+++++.
T Consensus 122 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~ 201 (250)
T 1o9g_A 122 PSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLA 201 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHH
Confidence 012 2348999999866554433 348999999
Q ss_pred HcccCCcEEEEEEec
Q 019861 256 RVLRPGGVFVGTTYI 270 (334)
Q Consensus 256 r~LkpgG~lii~~~~ 270 (334)
++|+|||++++....
T Consensus 202 ~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 202 SALPAHAVIAVTDRS 216 (250)
T ss_dssp HHSCTTCEEEEEESS
T ss_pred HhcCCCcEEEEeCcc
Confidence 999999999994443
No 177
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.28 E-value=1.9e-11 Score=111.58 Aligned_cols=104 Identities=20% Similarity=0.179 Sum_probs=77.8
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCc
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSI 232 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~f 232 (334)
.+...+...++.+|||+|||+|..+..+++.. ....++|+|+++.+++.+++++...+ +..+++|
T Consensus 109 l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~f 188 (315)
T 1ixk_A 109 YPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEF 188 (315)
T ss_dssp HHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCE
T ss_pred HHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccC
Confidence 34455566778899999999999999999874 34699999999999999998864321 1124689
Q ss_pred eEEEeC------ccccCCCCH----------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 233 DAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 233 D~V~~~------~vl~h~~d~----------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|+|++. .++.+.++. ..+|+++.++|||||++++++-..
T Consensus 189 D~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 189 DKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 999983 334443321 478999999999999999987654
No 178
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.28 E-value=2.1e-11 Score=105.48 Aligned_cols=103 Identities=14% Similarity=0.119 Sum_probs=78.8
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCC------------------C
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES------------------N 226 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~------------------~ 226 (334)
...+....+..++.+|||||||+|..+..+++.. +..+++++|+++.+++.|++++...+ .
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~ 124 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSR 124 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHH
Confidence 3344444444445599999999999999999864 36799999999999999998875321 1
Q ss_pred CCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 227 FPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+++++||+|++.... .+...+++++.++|+|||++++.....
T Consensus 125 ~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~dn~~~ 166 (221)
T 3dr5_A 125 LANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVLADALL 166 (221)
T ss_dssp SCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEETTTTG
T ss_pred hcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEEeCCCC
Confidence 336789999987643 356678999999999999999854443
No 179
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.28 E-value=2.5e-11 Score=105.62 Aligned_cols=105 Identities=16% Similarity=0.157 Sum_probs=82.5
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NF 227 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~ 227 (334)
.....+...+...++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.... +.
T Consensus 41 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 120 (233)
T 2gpy_A 41 LGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEK 120 (233)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHH
T ss_pred HHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHh
Confidence 33444445444456789999999999999999998766799999999999999998865321 01
Q ss_pred C--CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 228 P--KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 228 ~--~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
. +++||+|++....+ +...+++++.++|+|||++++.+...
T Consensus 121 ~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 163 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVLF 163 (233)
T ss_dssp HTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTTC
T ss_pred cccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCCc
Confidence 1 46899999987754 77889999999999999999975543
No 180
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.28 E-value=3e-11 Score=105.79 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=81.3
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CC-CCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NF-PKD 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~-~~~ 230 (334)
...+...+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++..... .+ +++
T Consensus 80 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 157 (248)
T 2yvl_A 80 SFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEG 157 (248)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTT
T ss_pred HHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCC
Confidence 3466666676778899999999999999999884 499999999999999998764321 22 556
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
.||+|++ +.+++..+++++.++|+|||++++..+.
T Consensus 158 ~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 158 IFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred cccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 8999997 4568888999999999999999998875
No 181
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.28 E-value=1.1e-11 Score=113.77 Aligned_cols=89 Identities=22% Similarity=0.341 Sum_probs=72.8
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeCc-
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAGA- 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~~- 239 (334)
.++.+|||||||+|.++..+++.+ ..+|+|+|++ .+++.|++++.... ++++++||+|++..
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWM 114 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCC
T ss_pred cCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCc
Confidence 357899999999999999999885 3589999999 68999988764321 34557899999874
Q ss_pred --cccCCCCHHHHHHHHHHcccCCcEEEE
Q 019861 240 --AIHCWSSPSTGVAEISRVLRPGGVFVG 266 (334)
Q Consensus 240 --vl~h~~d~~~~L~~i~r~LkpgG~lii 266 (334)
.+.+..++..++.++.++|+|||+++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 455666788999999999999999974
No 182
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.28 E-value=4.4e-12 Score=124.85 Aligned_cols=92 Identities=18% Similarity=0.289 Sum_probs=77.2
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeCccc
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAGAAI 241 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~~vl 241 (334)
+.+|||||||.|.++..|++.|. .|+|||+++.+++.|+......+ .+.+++||+|++..+|
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 67999999999999999999987 99999999999999998766443 2456799999999999
Q ss_pred cCCCCHH--HHHHHHHHcccCCcEEEEEEecc
Q 019861 242 HCWSSPS--TGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 242 ~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
||++||. ..+..+.+.|+++|..++.....
T Consensus 145 ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 145 HHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 9999986 33567778888888777665544
No 183
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.27 E-value=4.1e-13 Score=117.52 Aligned_cols=129 Identities=16% Similarity=0.076 Sum_probs=95.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCceEEEeCcccc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD~V~~~~vl~ 242 (334)
++.+|||+|||+|.++..++..+. +|+|+|+++.+++.+++++.... ..++++||+|++...++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWG 155 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCS
T ss_pred CCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcC
Confidence 578999999999999999999874 99999999999999998865322 12457999999999999
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEE-eecC
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC-TRNR 321 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~-~~~g 321 (334)
|..++...+.+++++|+|||.+++....... . ..........+.+++..++...|...+.. ...+
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~~~~~~~------------~--~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~~ 221 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFRLSKKIT------------N--NIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNN 221 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHHHHHHHC------------S--CEEEEEETTBCHHHHHHTTCTTCCEEEEEEEETT
T ss_pred CcchhhhHHHHHHhhcCCcceeHHHHHHhhC------------C--ceEEECCCCCCHHHHHHHhccCCCEEEEehhhcC
Confidence 9888877888999999999985543211100 0 00001224567888999998888765553 3344
No 184
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.26 E-value=1.6e-11 Score=107.02 Aligned_cols=150 Identities=11% Similarity=0.098 Sum_probs=104.3
Q ss_pred CcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCC
Q 019861 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFP 228 (334)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~ 228 (334)
..+.+...+...+.. +.+|||||||.|-++..+....+...|+++|+++.+++.+++++...+ ..+
T Consensus 118 ~lD~fY~~i~~~i~~--p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p 195 (281)
T 3lcv_B 118 HLDEFYRELFRHLPR--PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRL 195 (281)
T ss_dssp GHHHHHHHHGGGSCC--CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCC
T ss_pred hHHHHHHHHHhccCC--CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCC
Confidence 344555566666643 679999999999999999988788899999999999999999876532 345
Q ss_pred CCCceEEEeCccccCCCCHH--HHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHH
Q 019861 229 KDSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 306 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d~~--~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~l 306 (334)
.+.||+|++.-+++|+.+.. ..+ ++.+.|+++|+++-- |... .....+. +...+ .+.|++.
T Consensus 196 ~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSf-p~ks-l~Grs~g---m~~~Y-----------~~~~e~~ 258 (281)
T 3lcv_B 196 DEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTF-PTKS-LGQRSKG---MFQNY-----------SQSFESQ 258 (281)
T ss_dssp CSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEE-ECC--------C---HHHHH-----------HHHHHHH
T ss_pred CCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEec-cchh-hcCCCcc---hhhHH-----------HHHHHHH
Confidence 78899999999999997553 344 899999999876643 3311 1011111 11222 3478888
Q ss_pred HHhCCCcEEEEeecCcEEEEEEEc
Q 019861 307 CRACGLVDFKCTRNRGFVMFTATK 330 (334)
Q Consensus 307 l~~~Gf~~v~~~~~g~~~~~~a~K 330 (334)
+.+.|.. ++....+.-.+++.+|
T Consensus 259 ~~~~g~~-~~~~~~~nEl~y~i~k 281 (281)
T 3lcv_B 259 ARERSCR-IQRLEIGNELIYVIQK 281 (281)
T ss_dssp HHHHTCC-EEEEEETTEEEEEEC-
T ss_pred HHhcCCc-eeeeeecCeeEEEecC
Confidence 9999994 5555555444554443
No 185
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.26 E-value=1.3e-11 Score=114.23 Aligned_cols=101 Identities=17% Similarity=0.222 Sum_probs=79.8
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~ 231 (334)
+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.+++++.... ++ .++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~-~~~ 116 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSL-PEQ 116 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSC
T ss_pred HHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCC-CCc
Confidence 455555555678899999999999999999875 46999999996 8888887764321 12 257
Q ss_pred ceEEEeCccccCCCC--HHHHHHHHHHcccCCcEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
||+|++..+++|+.+ ....+.+++++|+|||.+++...+
T Consensus 117 ~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 117 VDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp EEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred eeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 999999999988864 457888999999999999876544
No 186
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.26 E-value=2.5e-11 Score=105.02 Aligned_cols=91 Identities=23% Similarity=0.371 Sum_probs=74.6
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcC--------C-----------CCCCCCceE
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE--------S-----------NFPKDSIDA 234 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~--------~-----------~~~~~~fD~ 234 (334)
..++.+|||||||+|.++..+++. ++..+|+|+|+++.+++.++++.... . ...+++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 446789999999999999999887 45569999999999999998875431 1 123568999
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|++...++++ ++++.++|+|||++++.....
T Consensus 155 i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~~ 185 (226)
T 1i1n_A 155 IHVGAAAPVV------PQALIDQLKPGGRLILPVGPA 185 (226)
T ss_dssp EEECSBBSSC------CHHHHHTEEEEEEEEEEESCT
T ss_pred EEECCchHHH------HHHHHHhcCCCcEEEEEEecC
Confidence 9999999886 468899999999999987653
No 187
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.25 E-value=1.8e-11 Score=107.56 Aligned_cols=89 Identities=19% Similarity=0.246 Sum_probs=71.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----------C-------------C--CCCCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------S-------------N--FPKDS 231 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------~-------------~--~~~~~ 231 (334)
++.+|||||||+|.++..++..++...++|+|+++.+++.+++++... . + +++++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 467999999999999999999987779999999999999998764321 1 1 44677
Q ss_pred ceEEEeCccccCCCCH-------------HHHHHHHHHcccCCcEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSSP-------------STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~-------------~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+|.|+.. +++| ..+++++.++|+|||++++.+..
T Consensus 129 ~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 129 LSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp EEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc
Confidence 8888743 4555 47999999999999999996643
No 188
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.23 E-value=5.6e-11 Score=109.11 Aligned_cols=102 Identities=13% Similarity=0.073 Sum_probs=76.7
Q ss_pred HHHcccC-CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------C----CC---
Q 019861 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------N----FP--- 228 (334)
Q Consensus 168 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~----~~--- 228 (334)
.+.+.+. ..++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+++++.... . .+
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~ 220 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREE 220 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHH
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHH
Confidence 3444442 23467999999999999999999876 99999999999999998764211 0 01
Q ss_pred --CCCceEEEeCc----------cccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 229 --KDSIDAVHAGA----------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 229 --~~~fD~V~~~~----------vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+++||+|++.- ++++..+...+++++.++|+|||.+++.....
T Consensus 221 ~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 221 RRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred hcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 46899999942 22334456789999999999999988776653
No 189
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.23 E-value=2.3e-11 Score=104.09 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=73.5
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~~ 239 (334)
++.+|||||||+|..+..++...+ ..+++++|+++.+++.+++++.... +..++ ||+|++..
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~ 134 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC 134 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcC
Confidence 467999999999999999998754 5699999999999999998754211 22245 99999874
Q ss_pred cccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 240 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
. ..+...+++++.++|+|||++++.+...
T Consensus 135 ~---~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 163 (210)
T 3c3p_A 135 D---VFNGADVLERMNRCLAKNALLIAVNALR 163 (210)
T ss_dssp T---TSCHHHHHHHHGGGEEEEEEEEEESSSS
T ss_pred C---hhhhHHHHHHHHHhcCCCeEEEEECccc
Confidence 3 3577889999999999999999866544
No 190
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.23 E-value=9.6e-11 Score=105.67 Aligned_cols=94 Identities=15% Similarity=0.280 Sum_probs=71.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------C-------------CCCCCCceEEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------S-------------NFPKDSIDAVH 236 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------~-------------~~~~~~fD~V~ 236 (334)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... . ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 367999999999999999998865678999999999999999875421 1 11357899999
Q ss_pred eCccccCCCCH----HHHHHHHHHcccCCcEEEEEEec
Q 019861 237 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 237 ~~~vl~h~~d~----~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+.......+.. ..++++++++|+|||++++....
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 96543222221 57899999999999999997654
No 191
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.23 E-value=1.9e-11 Score=106.00 Aligned_cols=90 Identities=20% Similarity=0.327 Sum_probs=73.2
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCC------CCeEEEEeCCHHHHHHHHHHHhcC------------------CCCCC-
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGL------FSLVVALDYSENMLKQCYEFVQQE------------------SNFPK- 229 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~------~~~v~giD~s~~~~~~a~~~~~~~------------------~~~~~- 229 (334)
..++.+|||||||+|.++..+++... ..+|+++|+++.+++.+++++... ..+++
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 45578999999999999999887532 248999999999999998865321 02344
Q ss_pred CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 230 DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
++||+|++..+++|+. +++.+.|+|||++++....
T Consensus 162 ~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 162 APYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp CSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 7899999999999875 6899999999999998764
No 192
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.23 E-value=3e-11 Score=104.58 Aligned_cols=90 Identities=21% Similarity=0.252 Sum_probs=74.3
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcC-----CCCeEEEEeCCHHHHHHHHHHHhcCC-------------------C----
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSENMLKQCYEFVQQES-------------------N---- 226 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~giD~s~~~~~~a~~~~~~~~-------------------~---- 226 (334)
..++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.+++++.... .
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 4457899999999999999999875 45699999999999999998754211 1
Q ss_pred CCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 227 FPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
...++||+|++...++|+ ++++.++|+|||++++..+.
T Consensus 158 ~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 224679999999999886 47889999999999998775
No 193
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.23 E-value=1.6e-10 Score=104.63 Aligned_cols=92 Identities=17% Similarity=0.181 Sum_probs=73.9
Q ss_pred CcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeCcccc
Q 019861 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAGAAIH 242 (334)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~~vl~ 242 (334)
.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.... .+++++||+|++.....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 49999999999999999997667799999999999999999875321 23467899999864332
Q ss_pred CCC----CHHHHHHHHHHcccCCcEEEEEEec
Q 019861 243 CWS----SPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 243 h~~----d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
... ....++++++++|+|||++++....
T Consensus 171 ~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 211 1257899999999999999987764
No 194
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.23 E-value=2.5e-11 Score=104.81 Aligned_cols=93 Identities=14% Similarity=0.114 Sum_probs=75.0
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC----------C-------CCC----CCce
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES----------N-------FPK----DSID 233 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~----------~-------~~~----~~fD 233 (334)
.++.+|||||||+|..+..++...+ ..+++++|+++.+++.+++++.... . +.. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 4567999999999999999998754 5799999999999999998875322 0 111 7899
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+|++... ..+...+++++.++|+|||++++.+...
T Consensus 143 ~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 143 LIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp EEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred EEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 9997654 2356788999999999999999876654
No 195
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.21 E-value=7.9e-12 Score=109.73 Aligned_cols=96 Identities=11% Similarity=0.115 Sum_probs=76.4
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCCC--------------CC-------CCCc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESN--------------FP-------KDSI 232 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~--------------~~-------~~~f 232 (334)
..++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++..... ++ +++|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 34467999999999999999998753 57999999999999999887753320 11 4789
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCC
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDG 273 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~ 273 (334)
|+|++... ..+...+++++.++|+|||++++.+....+
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g 175 (242)
T 3r3h_A 138 DFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWDG 175 (242)
T ss_dssp EEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSSS
T ss_pred eEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccCC
Confidence 99998765 335667899999999999999997766543
No 196
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.21 E-value=1.9e-11 Score=103.73 Aligned_cols=95 Identities=17% Similarity=0.284 Sum_probs=67.3
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCC--CCeEEEEeCCHHHHHHHHHHHhc---CCC------------------------
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGL--FSLVVALDYSENMLKQCYEFVQQ---ESN------------------------ 226 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~giD~s~~~~~~a~~~~~~---~~~------------------------ 226 (334)
.++.+|||+|||+|.++..+++..+ ..+++|+|+++......-+.... ..+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 100 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKE 100 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHHh
Confidence 4578999999999999999998865 57999999998421000000000 001
Q ss_pred -CCCCCceEEEeCccccCCC----CHH-------HHHHHHHHcccCCcEEEEEEec
Q 019861 227 -FPKDSIDAVHAGAAIHCWS----SPS-------TGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 227 -~~~~~fD~V~~~~vl~h~~----d~~-------~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+++++||+|++...+++.. +.. .+++++.++|+|||.+++..+.
T Consensus 101 ~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 101 ILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 3457899999988877642 221 3789999999999999987654
No 197
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.20 E-value=1.4e-10 Score=103.77 Aligned_cols=131 Identities=12% Similarity=0.080 Sum_probs=91.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CC-------------CCCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ES-------------NFPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~-------------~~~~~~fD~V~~ 237 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .. +..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 36799999999999999999874456999999999999999987632 11 112578999999
Q ss_pred CccccCCCC----HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 238 GAAIHCWSS----PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 238 ~~vl~h~~d----~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
.......+. ...++++++++|+|||++++...+... ... ....+.+.+++. |.
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~---~~~-------------------~~~~~~~~l~~~-F~ 211 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWF---TPE-------------------LITNVQRDVKEI-FP 211 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTT---CHH-------------------HHHHHHHHHHTT-CS
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccc---cHH-------------------HHHHHHHHHHHh-CC
Confidence 654322211 257899999999999999986543210 000 123455667666 76
Q ss_pred EEEEee-------cCcEEEEEEEc
Q 019861 314 DFKCTR-------NRGFVMFTATK 330 (334)
Q Consensus 314 ~v~~~~-------~g~~~~~~a~K 330 (334)
.+.... .|.+.++.+.|
T Consensus 212 ~v~~~~~~vp~~~~g~w~~~~ask 235 (275)
T 1iy9_A 212 ITKLYTANIPTYPSGLWTFTIGSK 235 (275)
T ss_dssp EEEEEEECCTTSGGGCEEEEEEES
T ss_pred CeEEEEEecCcccCcceEEEEeeC
Confidence 666442 45677777776
No 198
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.20 E-value=6.3e-11 Score=106.46 Aligned_cols=104 Identities=16% Similarity=0.115 Sum_probs=77.0
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------CC---CCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------NF---PKD 230 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------~~---~~~ 230 (334)
.+.+.+...+...++.+|||+|||+|.++..++.. +..+++|+|+|+.+++.|+++..... .+ ..+
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~ 188 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKE 188 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGG
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhccc
Confidence 34444554443334679999999999999999998 66799999999999999998865321 11 124
Q ss_pred Cc---eEEEeC------------ccccCCC--------CHHHHHHHHH-HcccCCcEEEEEEe
Q 019861 231 SI---DAVHAG------------AAIHCWS--------SPSTGVAEIS-RVLRPGGVFVGTTY 269 (334)
Q Consensus 231 ~f---D~V~~~------------~vl~h~~--------d~~~~L~~i~-r~LkpgG~lii~~~ 269 (334)
+| |+|+++ .+. |.+ |...+++++. +.|+|||++++...
T Consensus 189 ~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 189 KFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred ccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 78 999997 233 332 2237899999 99999999998543
No 199
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.20 E-value=1.1e-10 Score=105.57 Aligned_cols=92 Identities=13% Similarity=0.107 Sum_probs=70.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CC-------------CCCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ES-------------NFPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~-------------~~~~~~fD~V~~ 237 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.+++++.. .. +..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 35799999999999999999875557999999999999999987632 11 122568999998
Q ss_pred CccccC-CC-----CHHHHHHHHHHcccCCcEEEEEEe
Q 019861 238 GAAIHC-WS-----SPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 238 ~~vl~h-~~-----d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
... .+ +. ....++++++++|+|||++++...
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 532 22 21 126889999999999999999654
No 200
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.19 E-value=1.8e-10 Score=105.00 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=74.3
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-------CC-------------CCCCCCceEEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------ES-------------NFPKDSIDAVH 236 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-------~~-------------~~~~~~fD~V~ 236 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .. +..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 35799999999999999999875556999999999999999987642 11 11357899999
Q ss_pred eCccccC-CCC------HHHHHHHHHHcccCCcEEEEEEec
Q 019861 237 AGAAIHC-WSS------PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 237 ~~~vl~h-~~d------~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+....++ ... ...++++++++|+|||++++....
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 9765533 112 268899999999999999997544
No 201
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.19 E-value=4.6e-10 Score=104.74 Aligned_cols=123 Identities=17% Similarity=0.118 Sum_probs=91.0
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------C
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------N 226 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~ 226 (334)
.+.....+.... ..++.+|||+|||+|.++..++..+...+++|+|+++.+++.|++++...+ +
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLS 281 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCC
Confidence 344445555555 566889999999999999999998866689999999999999999875322 3
Q ss_pred CCCCCceEEEeCccccC-------CCCH-HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCC
Q 019861 227 FPKDSIDAVHAGAAIHC-------WSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFL 298 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h-------~~d~-~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (334)
+++++||+|+++-.... +.+. ..++++++++| ||.+++.+.
T Consensus 282 ~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~----------------------------- 330 (373)
T 3tm4_A 282 QYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT----------------------------- 330 (373)
T ss_dssp GTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-----------------------------
T ss_pred cccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-----------------------------
Confidence 44678999999643221 1111 56788999988 565555443
Q ss_pred CHHHHHHHHHhCCCcEEE
Q 019861 299 SEREIEDLCRACGLVDFK 316 (334)
Q Consensus 299 t~~~l~~ll~~~Gf~~v~ 316 (334)
+.+.+.+.+++.||+..+
T Consensus 331 ~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 331 EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp CHHHHHHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHcCCEEEE
Confidence 356778889999998876
No 202
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.18 E-value=6.2e-11 Score=104.33 Aligned_cols=93 Identities=12% Similarity=0.084 Sum_probs=75.1
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC----------------C-C-----CCCCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES----------------N-F-----PKDSI 232 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~----------------~-~-----~~~~f 232 (334)
.++.+|||||||+|..+..++...+ ..+++++|+++.+++.|++++.... + + ++++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 3467999999999999999998854 5699999999999999998765321 0 1 15789
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|+|++... ..+...+++++.++|+|||++++.....
T Consensus 158 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 193 (247)
T 1sui_A 158 DFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTLW 193 (247)
T ss_dssp SEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTTG
T ss_pred EEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCCc
Confidence 99998754 3467789999999999999999865443
No 203
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.17 E-value=1.8e-10 Score=106.64 Aligned_cols=111 Identities=18% Similarity=0.004 Sum_probs=85.0
Q ss_pred CCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCC-------------
Q 019861 160 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES------------- 225 (334)
Q Consensus 160 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~------------- 225 (334)
+..+.+...+.......++.+|||+|||+|.++..++..+ +...++|+|+++.+++.|++++...+
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~ 265 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARH 265 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGG
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhh
Confidence 3345566667777777778899999999999999999875 56799999999999999999876332
Q ss_pred -CCCCCCceEEEeCccccCCC--------CHHHHHHHHHHcccCCcEEEEEEec
Q 019861 226 -NFPKDSIDAVHAGAAIHCWS--------SPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 226 -~~~~~~fD~V~~~~vl~h~~--------d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+.+.+.||+|+++--..... ....+++++.++|+|||.+++.+++
T Consensus 266 ~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 266 LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 23356799999964322111 1257899999999999999998764
No 204
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.17 E-value=4e-11 Score=104.80 Aligned_cols=102 Identities=20% Similarity=0.221 Sum_probs=78.7
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC----------------C---
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES----------------N--- 226 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~----------------~--- 226 (334)
..+...+...++.+|||||||+|..+..+++..+ ..+++++|+++.+++.+++++.... +
T Consensus 50 ~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 129 (239)
T 2hnk_A 50 QFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLI 129 (239)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH
Confidence 3444444444578999999999999999998854 5699999999999999998764321 0
Q ss_pred -----------CCC--CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 227 -----------FPK--DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 227 -----------~~~--~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|++ ++||+|++....+ +...+++++.++|+|||++++.+...
T Consensus 130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 130 DSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred hhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 122 7899999986544 45678999999999999999976544
No 205
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.16 E-value=2.1e-10 Score=104.79 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=73.0
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CCC-------------CCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ESN-------------FPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~~-------------~~~~~fD~V~~ 237 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. ... ..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 35799999999999999999875567999999999999999998653 110 12568999998
Q ss_pred CccccCCC---C--HHHHHHHHHHcccCCcEEEEEEec
Q 019861 238 GAAIHCWS---S--PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 238 ~~vl~h~~---d--~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
... +++. + ...++++++++|+|||++++...+
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 643 2221 1 168899999999999999997544
No 206
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.15 E-value=1.8e-10 Score=102.81 Aligned_cols=92 Identities=20% Similarity=0.182 Sum_probs=76.2
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCC-CCCceEEEeCcccc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFP-KDSIDAVHAGAAIH 242 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~-~~~fD~V~~~~vl~ 242 (334)
.++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.++++..... .++ .++||+|++....
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH- 196 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS-
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc-
Confidence 45789999999999999999998656799999999999999998765321 111 4589999988653
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+...++.++.+.|+|||+++++....
T Consensus 197 ---~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 ---KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 66778999999999999999988765
No 207
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.15 E-value=3.2e-10 Score=108.36 Aligned_cols=105 Identities=19% Similarity=0.236 Sum_probs=82.1
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHHhcCC--------------C--CCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQES--------------N--FPK 229 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~--------------~--~~~ 229 (334)
..+...+...++.+|||+|||+|..+..++...+. ..++++|+++.+++.+++++...+ + +++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 328 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGE 328 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCS
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhcc
Confidence 34445566777889999999999999999987543 699999999999999998865321 1 333
Q ss_pred CCceEEEe------CccccCCCCH----------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 230 DSIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 230 ~~fD~V~~------~~vl~h~~d~----------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++||+|++ ..++++.++. ..+|+++.++|||||++++++...
T Consensus 329 ~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 329 EVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 78999996 3456655553 568999999999999999988764
No 208
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.15 E-value=6.1e-11 Score=103.29 Aligned_cols=93 Identities=15% Similarity=0.076 Sum_probs=74.4
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC-------------------CCCC--CCce
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES-------------------NFPK--DSID 233 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~-------------------~~~~--~~fD 233 (334)
.++.+|||||||+|..+..++...+ ..+++++|+++.+++.|++++.... +..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 3467999999999999999998754 5699999999999999998764211 1112 7899
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+|++.... .+...+++++.++|+|||++++.....
T Consensus 151 ~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 151 LIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred EEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 99987652 356788999999999999999976654
No 209
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.15 E-value=2e-11 Score=103.03 Aligned_cols=96 Identities=19% Similarity=0.287 Sum_probs=67.3
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCC---------CeEEEEeCCHHH-HHHHHHHH-hcCC-----------CCCCCCc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLF---------SLVVALDYSENM-LKQCYEFV-QQES-----------NFPKDSI 232 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~giD~s~~~-~~~a~~~~-~~~~-----------~~~~~~f 232 (334)
..++.+|||+|||+|.++..+++..+. .+++|+|+++.. +..++ .. ..+. .+++++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~f 98 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGAT-FLCPADVTDPRTSQRILEVLPGRRA 98 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCE-EECSCCTTSHHHHHHHHHHSGGGCE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCe-EEEeccCCCHHHHHHHHHhcCCCCC
Confidence 345789999999999999999988432 689999999843 11000 01 1110 1234689
Q ss_pred eEEEeCccccCC----CCH-------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 233 DAVHAGAAIHCW----SSP-------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 233 D~V~~~~vl~h~----~d~-------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|+|++...++.. .++ ..+++++.++|+|||++++.++..
T Consensus 99 D~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 99 DVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred cEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999997654432 233 478999999999999999987653
No 210
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.14 E-value=7.9e-11 Score=113.27 Aligned_cols=100 Identities=17% Similarity=0.251 Sum_probs=77.5
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCC-CCCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFP-KDSI 232 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~-~~~f 232 (334)
+.+...+...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|++++.... .++ .++|
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~f 225 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQV 225 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCE
T ss_pred HHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCe
Confidence 445555555567899999999999999998864 46999999998 8999988754321 111 3589
Q ss_pred eEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEE
Q 019861 233 DAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 233 D~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~ 268 (334)
|+|++..+++|+.+. ...+.+++++|+|||.+++..
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999999888888654 567788999999999998644
No 211
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.14 E-value=4.9e-10 Score=103.40 Aligned_cols=114 Identities=13% Similarity=0.123 Sum_probs=83.8
Q ss_pred CCCCcHHHHHHHHccc----CCCCCCcEEEECCCcCHHHHHHHHcCCC-----CeEEEEeCCHHHHHHHHHHHhcC----
Q 019861 158 GFPGPEKEFELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKSGLF-----SLVVALDYSENMLKQCYEFVQQE---- 224 (334)
Q Consensus 158 ~~~~~~~~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~giD~s~~~~~~a~~~~~~~---- 224 (334)
.+..|......+...+ .+.++.+|||+|||+|.++..+++..+. ..++|+|+++.+++.|+.++...
T Consensus 107 ~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~ 186 (344)
T 2f8l_A 107 HQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKM 186 (344)
T ss_dssp GCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCC
T ss_pred cCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCc
Confidence 3455665544433332 4445679999999999999988876532 58999999999999999875421
Q ss_pred --------CCCCCCCceEEEeCccccCCCCH------------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 225 --------SNFPKDSIDAVHAGAAIHCWSSP------------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 225 --------~~~~~~~fD~V~~~~vl~h~~d~------------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.+...+.||+|+++--+.++++. ..+++++.+.|+|||++++..++.
T Consensus 187 ~i~~~D~l~~~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 187 TLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEESCTTSCCCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred eEEECCCCCccccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 12345789999998665555432 257999999999999999999863
No 212
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.13 E-value=6.9e-10 Score=95.84 Aligned_cols=144 Identities=8% Similarity=-0.032 Sum_probs=93.8
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCCCc
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKDSI 232 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~~f 232 (334)
....+... .++.+|||||||.|.++..+. +...|+|+|+++.+++.++++..... ..+.++|
T Consensus 96 fY~~i~~~---~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~ 169 (253)
T 3frh_A 96 LYDFIFSA---ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAG 169 (253)
T ss_dssp HHHHHTSS---CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBC
T ss_pred HHHHHhcC---CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCc
Confidence 33444444 457899999999999999888 45699999999999999999865422 2345689
Q ss_pred eEEEeCccccCCCCH-HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 233 DAVHAGAAIHCWSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 233 D~V~~~~vl~h~~d~-~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
|+|++.-++||+.+. ...+-++.+.|+++|+++ +.|... .....+. +.. .-.+.|++.+ ...
T Consensus 170 DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvV-sfPtks-l~Gr~~g---m~~-----------~Y~~~~e~~~-~~~ 232 (253)
T 3frh_A 170 DLALIFKLLPLLEREQAGSAMALLQSLNTPRMAV-SFPTRS-LGGRGKG---MEA-----------NYAAWFEGGL-PAE 232 (253)
T ss_dssp SEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEE-EEECC--------------------------CHHHHHHHHS-CTT
T ss_pred chHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEE-EcChHH-hcCCCcc---hhh-----------HHHHHHHHHh-hcc
Confidence 999999888887533 223348888999987554 445321 1111111 101 1133555555 456
Q ss_pred CcEEEEeecCcEEEEEEEcC
Q 019861 312 LVDFKCTRNRGFVMFTATKP 331 (334)
Q Consensus 312 f~~v~~~~~g~~~~~~a~K~ 331 (334)
+.+++....|.-.+++.+|.
T Consensus 233 ~~~~~~~~~~nEl~~~i~~~ 252 (253)
T 3frh_A 233 FEIEDKKTIGTELIYLIKKN 252 (253)
T ss_dssp EEEEEEEEETTEEEEEEEEC
T ss_pred chhhhheecCceEEEEEecC
Confidence 67788777777677766663
No 213
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.12 E-value=1.7e-10 Score=103.13 Aligned_cols=103 Identities=16% Similarity=0.079 Sum_probs=78.5
Q ss_pred HcccCCCCCCcEEEECCCcCHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHHhcCC--------------CC----CCC
Q 019861 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQES--------------NF----PKD 230 (334)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~--------------~~----~~~ 230 (334)
...+...++.+|||+|||+|..+..+++..+. .+|+|+|+++.+++.+++++...+ +. .++
T Consensus 76 ~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 76 PIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp HHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTC
T ss_pred HHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccc
Confidence 34455667889999999999999999986433 699999999999999998865332 01 256
Q ss_pred CceEEEeC------cccc------------CCCCHHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 231 SIDAVHAG------AAIH------------CWSSPSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 231 ~fD~V~~~------~vl~------------h~~d~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
+||+|++. .++. +......+|+++.++|||||++++++....
T Consensus 156 ~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 156 FFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp CEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred cCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 89999986 2222 123557899999999999999999887653
No 214
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.11 E-value=4e-10 Score=101.17 Aligned_cols=94 Identities=13% Similarity=0.114 Sum_probs=73.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------C-------------CCCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------S-------------NFPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~-------------~~~~~~fD~V~~ 237 (334)
++.+|||||||+|.++..+++..+..+++++|+++.+++.+++++... . ...+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 467999999999999999998765679999999999999999987531 1 012578999999
Q ss_pred CccccCCCCH----HHHHHHHHHcccCCcEEEEEEec
Q 019861 238 GAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 238 ~~vl~h~~d~----~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
.....+.+.. ..++++++++|+|||++++...+
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 6443222211 58999999999999999987543
No 215
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.11 E-value=1.6e-10 Score=107.25 Aligned_cols=88 Identities=24% Similarity=0.403 Sum_probs=70.6
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEe---
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHA--- 237 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~--- 237 (334)
.++++|||||||+|.++..+++.|. .+|+|+|.|+ +++.|++.+.... .+ .+++|+|++
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~l-pe~~DvivsE~~ 158 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVEL-PEQVDAIVSEWM 158 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCC-SSCEEEEECCCC
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecC-CccccEEEeecc
Confidence 3578999999999999999998884 5899999986 7888887655432 23 368999998
Q ss_pred CccccCCCCHHHHHHHHHHcccCCcEEEE
Q 019861 238 GAAIHCWSSPSTGVAEISRVLRPGGVFVG 266 (334)
Q Consensus 238 ~~vl~h~~d~~~~L~~i~r~LkpgG~lii 266 (334)
...|.+-.....++....+.|+|||.++-
T Consensus 159 ~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 159 GYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp BTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred cccccccchhhhHHHHHHhhCCCCceECC
Confidence 45566666778899999999999998874
No 216
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.11 E-value=1.3e-10 Score=100.62 Aligned_cols=101 Identities=15% Similarity=0.112 Sum_probs=77.4
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCCC-----------------CCC
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESN-----------------FPK 229 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~~-----------------~~~ 229 (334)
.+.......++.+|||||||+|.++..+++..+ ..+++++|+++.+++.+++++..... +.+
T Consensus 60 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~ 139 (229)
T 2avd_A 60 LLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLA 139 (229)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHh
Confidence 333333334578999999999999999998754 56999999999999999988653210 111
Q ss_pred ----CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 230 ----DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 230 ----~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++||+|++... ..+...+++++.++|+|||++++.....
T Consensus 140 ~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 182 (229)
T 2avd_A 140 AGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVLW 182 (229)
T ss_dssp TTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCSG
T ss_pred cCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCCc
Confidence 68999999754 3456788999999999999999866543
No 217
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.11 E-value=4.8e-10 Score=100.54 Aligned_cols=91 Identities=11% Similarity=0.112 Sum_probs=71.5
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------------CC------------CC-CCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------------SN------------FP-KDS 231 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------------~~------------~~-~~~ 231 (334)
.+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++ .. .+ ++ +++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 4679999999999999999988 5679999999999999999887 21 10 00 468
Q ss_pred ceEEEeCccccCCCC-----HHHHHHHHHHcccCCcEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSS-----PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d-----~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
||+|++.... ++.. ...++++++++|+|||++++....
T Consensus 153 fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 153 FDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999986543 2211 257899999999999999997544
No 218
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.10 E-value=7.7e-11 Score=102.98 Aligned_cols=90 Identities=12% Similarity=0.062 Sum_probs=69.5
Q ss_pred CCCcEEEECCCcCHHHHHHHHc----CCCCeEEEEeCCHHHHHHHHHHHh------cC-CC-----C-CCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKS----GLFSLVVALDYSENMLKQCYEFVQ------QE-SN-----F-PKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~giD~s~~~~~~a~~~~~------~~-~~-----~-~~~~fD~V~~~~ 239 (334)
++.+|||||||+|..+..+++. ++..+|+|+|+++.+++.|+.... .+ .. . .+.+||+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 3579999999999999999886 556799999999999887763110 00 01 1 223799999876
Q ss_pred cccCCCCHHHHHHHHHH-cccCCcEEEEEEe
Q 019861 240 AIHCWSSPSTGVAEISR-VLRPGGVFVGTTY 269 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r-~LkpgG~lii~~~ 269 (334)
. | .+...+|.++.+ +|+|||++++.+.
T Consensus 161 ~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 161 A--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp S--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred c--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 5 4 377889999997 9999999999654
No 219
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.10 E-value=4.3e-10 Score=106.85 Aligned_cols=106 Identities=22% Similarity=0.228 Sum_probs=83.5
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------C----CCCC
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------N----FPKD 230 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~----~~~~ 230 (334)
...+...+...++.+|||+|||+|..+..+++.++...++|+|+++.+++.+++++...+ . ++++
T Consensus 235 s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~ 314 (429)
T 1sqg_A 235 AQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQ 314 (429)
T ss_dssp HHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTC
T ss_pred HHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccC
Confidence 344455566777899999999999999999998766799999999999999998865321 1 2346
Q ss_pred CceEEEe------CccccCCCCH----------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 231 SIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 231 ~fD~V~~------~~vl~h~~d~----------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+||+|++ ..++++.++. ..+|+++.++|||||++++++...
T Consensus 315 ~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 315 QFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 8999996 2455555553 378999999999999999988654
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.10 E-value=4.9e-10 Score=101.95 Aligned_cols=91 Identities=12% Similarity=0.130 Sum_probs=69.8
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------C-------------CCCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------S-------------NFPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~-------------~~~~~~fD~V~~ 237 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... . +..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 357999999999999999998865679999999999999999987531 1 013578999998
Q ss_pred CccccCCCCH-----HHHHHHHHHcccCCcEEEEEE
Q 019861 238 GAAIHCWSSP-----STGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 238 ~~vl~h~~d~-----~~~L~~i~r~LkpgG~lii~~ 268 (334)
... +++..+ ..++++++++|+|||++++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 653 333211 578999999999999999865
No 221
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.09 E-value=3.8e-10 Score=98.55 Aligned_cols=92 Identities=15% Similarity=0.162 Sum_probs=73.8
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC-----------------CC-----CCCCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES-----------------NF-----PKDSI 232 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~-----~~~~f 232 (334)
.++.+|||||||+|..+..+++..+ ..+++++|+++.+++.+++++...+ .+ ++++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 3467999999999999999998754 5799999999999999998765321 01 25789
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
|+|++.... .+...+++++.++|+|||++++....
T Consensus 149 D~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 149 DFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp EEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 999987532 35578899999999999999886543
No 222
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.09 E-value=2e-10 Score=97.08 Aligned_cols=95 Identities=15% Similarity=0.196 Sum_probs=63.6
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-CC----------C---CCCceEEEeCcc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NF----------P---KDSIDAVHAGAA 240 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~----------~---~~~fD~V~~~~v 240 (334)
..++.+|||+|||+|.++..+++.+ ..|+|+|+++............+. .. . .++||+|++...
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~ 100 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEMEEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAM 100 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCCCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCC
Confidence 3468899999999999999999884 599999999742100000000000 00 0 148999999754
Q ss_pred ccCCC----C-------HHHHHHHHHHcccCCcEEEEEEecc
Q 019861 241 IHCWS----S-------PSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 241 l~h~~----d-------~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
..... | ...+|+.+.++|||||.+++.....
T Consensus 101 ~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~ 142 (191)
T 3dou_A 101 AKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQG 142 (191)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred cCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCC
Confidence 32211 1 2467889999999999999877653
No 223
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.09 E-value=1e-09 Score=92.97 Aligned_cols=82 Identities=15% Similarity=0.117 Sum_probs=63.1
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------CCCCCCCceEEEeCccccCCCC-
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------SNFPKDSIDAVHAGAAIHCWSS- 246 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------~~~~~~~fD~V~~~~vl~h~~d- 246 (334)
..++.+|||+|||+|.++..++..+ ..+++|+|+++.+++.++++.... ..++ ++||+|+++..++|+.+
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~-~~~D~v~~~~p~~~~~~~ 126 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS-GKYDTWIMNPPFGSVVKH 126 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC-CCEEEEEECCCC------
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC-CCeeEEEECCCchhccCc
Confidence 3457899999999999999999884 347999999999999999876411 1233 68999999999998865
Q ss_pred -HHHHHHHHHHcc
Q 019861 247 -PSTGVAEISRVL 258 (334)
Q Consensus 247 -~~~~L~~i~r~L 258 (334)
...+++++.++|
T Consensus 127 ~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 127 SDRAFIDKAFETS 139 (200)
T ss_dssp -CHHHHHHHHHHE
T ss_pred hhHHHHHHHHHhc
Confidence 347899999998
No 224
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.09 E-value=5.7e-11 Score=105.54 Aligned_cols=91 Identities=16% Similarity=0.147 Sum_probs=67.5
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHH----------H---H--h-cCCCCCCCCceEEEeC
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYE----------F---V--Q-QESNFPKDSIDAVHAG 238 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~----------~---~--~-~~~~~~~~~fD~V~~~ 238 (334)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++ . + . +...+++++||+|++.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd 147 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCD 147 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEEC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEe
Confidence 345789999999999999999887 3899999998 4222211 0 1 0 1113557799999998
Q ss_pred ccccCCCCHH-------HHHHHHHHcccCCc--EEEEEEec
Q 019861 239 AAIHCWSSPS-------TGVAEISRVLRPGG--VFVGTTYI 270 (334)
Q Consensus 239 ~vl~h~~d~~-------~~L~~i~r~LkpgG--~lii~~~~ 270 (334)
.+ ++..++. .+|+.+.++|+||| .+++.++.
T Consensus 148 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 148 VG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred Cc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 77 6555542 37899999999999 99997765
No 225
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.09 E-value=1.6e-09 Score=96.58 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=89.1
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------C-CCCCCce
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------N-FPKDSID 233 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~-~~~~~fD 233 (334)
.+...+.+ +.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.+++++.... . .+.+.||
T Consensus 118 ri~~~~~~--g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D 194 (278)
T 3k6r_A 118 RMAKVAKP--DELVVDMFAGIGHLSLPIAVYG-KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIAD 194 (278)
T ss_dssp HHHHHCCT--TCEEEETTCTTTTTTHHHHHHT-CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEE
T ss_pred HHHHhcCC--CCEEEEecCcCcHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCC
Confidence 34444444 8899999999999999998887 3589999999999999999876432 1 2357899
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCc
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
.|++..- +....+|..+.++|++||++.+....... .......+.++++++..|++
T Consensus 195 ~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~--------------------~~~~~~~e~i~~~~~~~g~~ 250 (278)
T 3k6r_A 195 RILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK--------------------LMPREPFETFKRITKEYGYD 250 (278)
T ss_dssp EEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--------------------GTTTTTHHHHHHHHHHTTCE
T ss_pred EEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeeccc--------------------ccchhHHHHHHHHHHHcCCc
Confidence 9998632 34456788999999999998876654321 01112456788889999996
Q ss_pred E
Q 019861 314 D 314 (334)
Q Consensus 314 ~ 314 (334)
+
T Consensus 251 v 251 (278)
T 3k6r_A 251 V 251 (278)
T ss_dssp E
T ss_pred E
Confidence 5
No 226
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.09 E-value=4.6e-11 Score=106.75 Aligned_cols=91 Identities=20% Similarity=0.160 Sum_probs=67.5
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHH----------Hh-c--C---CCCCCCCceEEEeC
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF----------VQ-Q--E---SNFPKDSIDAVHAG 238 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~----------~~-~--~---~~~~~~~fD~V~~~ 238 (334)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+++. +. . . ..+++++||+|++.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd 155 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCD 155 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEEC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEEC
Confidence 346789999999999999999987 3899999998 43322111 00 0 1 12457899999998
Q ss_pred ccccCCCCHH-------HHHHHHHHcccCCc--EEEEEEec
Q 019861 239 AAIHCWSSPS-------TGVAEISRVLRPGG--VFVGTTYI 270 (334)
Q Consensus 239 ~vl~h~~d~~-------~~L~~i~r~LkpgG--~lii~~~~ 270 (334)
.+ ++..++. .+|+++.++|+||| .+++.++.
T Consensus 156 ~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 156 IG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 87 5554432 37899999999999 99987765
No 227
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.08 E-value=4.4e-10 Score=99.66 Aligned_cols=86 Identities=12% Similarity=0.076 Sum_probs=70.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CC----------CCCCCCceEEEeCcc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ES----------NFPKDSIDAVHAGAA 240 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~----------~~~~~~fD~V~~~~v 240 (334)
.+.+|||||||+|.++..+.+. + .+++++|+++.+++.|++++.. .. .+. ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-~~fD~Ii~d-- 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-KKYDLIFCL-- 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC-CCEEEEEES--
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH-hhCCEEEEC--
Confidence 3579999999999999999888 5 7999999999999999876532 11 122 679999986
Q ss_pred ccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 241 IHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 241 l~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
..+|..++++++++|+|||++++...+
T Consensus 147 ---~~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 147 ---QEPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp ---SCCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ---CCChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 367888999999999999999986543
No 228
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.08 E-value=2.2e-09 Score=91.30 Aligned_cols=112 Identities=15% Similarity=0.125 Sum_probs=81.9
Q ss_pred CCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------CCCCCCceEEEeCccccC
Q 019861 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------NFPKDSIDAVHAGAAIHC 243 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~~~~~fD~V~~~~vl~h 243 (334)
..++.+|||+|||+|.++..++..+. .+++|+|+++.+++.++++..... .+ +++||+|+++-.+++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~-~~~~D~v~~~~p~~~ 124 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-NSRVDIVIMNPPFGS 124 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-CCCCSEEEECCCCSS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc-CCCCCEEEEcCCCcc
Confidence 44678999999999999999998863 489999999999999998865321 12 258999999887776
Q ss_pred CC--CHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEE
Q 019861 244 WS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 316 (334)
Q Consensus 244 ~~--d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~ 316 (334)
.. ....+++++.++| ||.+++..... . +.+.+.+++++.||++..
T Consensus 125 ~~~~~~~~~l~~~~~~l--~~~~~~~~~~~--------~------------------~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 125 QRKHADRPFLLKAFEIS--DVVYSIHLAKP--------E------------------VRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSTTTTHHHHHHHHHHC--SEEEEEEECCH--------H------------------HHHHHHHHHHHTTEEEEE
T ss_pred ccCCchHHHHHHHHHhc--CcEEEEEeCCc--------C------------------CHHHHHHHHHHCCCeEEE
Confidence 64 3357889999998 55444331110 0 234567788889986644
No 229
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.07 E-value=9.2e-11 Score=105.44 Aligned_cols=100 Identities=13% Similarity=0.089 Sum_probs=73.6
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKD 230 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~ 230 (334)
...+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++..... .++..
T Consensus 15 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 15 LIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 4455666667777788999999999999999999876 99999999999999998764211 12334
Q ss_pred CceEEEeC-----------ccccCCCCHHHHH----HHH--HHcccCCcEEE
Q 019861 231 SIDAVHAG-----------AAIHCWSSPSTGV----AEI--SRVLRPGGVFV 265 (334)
Q Consensus 231 ~fD~V~~~-----------~vl~h~~d~~~~L----~~i--~r~LkpgG~li 265 (334)
.||+|+++ .+|+|.+++..++ +++ +++|+|||.++
T Consensus 93 ~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 93 FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 79999995 4566655543211 333 46899999653
No 230
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.06 E-value=4.7e-10 Score=102.89 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=73.3
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CC--------------CCCCCCceEEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ES--------------NFPKDSIDAVH 236 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~--------------~~~~~~fD~V~ 236 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .. ..++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 46799999999999999999886567999999999999999987642 11 12457899999
Q ss_pred eCcccc-CCCC---HHHHHHHHHHcccCCcEEEEEEec
Q 019861 237 AGAAIH-CWSS---PSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 237 ~~~vl~-h~~d---~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+..... +..+ ...++++++++|+|||++++...+
T Consensus 200 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 237 (334)
T 1xj5_A 200 VDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAES 237 (334)
T ss_dssp ECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred ECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 865421 1111 368899999999999999986443
No 231
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.06 E-value=1.1e-10 Score=108.12 Aligned_cols=105 Identities=16% Similarity=0.114 Sum_probs=72.6
Q ss_pred HHHHHHHcccCCCCCCcEEEECCC------cCHHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHh---cC---CCCC--
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCG------SGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQ---QE---SNFP-- 228 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG------~G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~---~~---~~~~-- 228 (334)
...+.+...+.. ++.+||||||| +|..+..+.+ ..+.++|+|+|+++.|... ..++. .+ .++.
T Consensus 204 ~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~~-~~rI~fv~GDa~dlpf~~~ 281 (419)
T 3sso_A 204 PHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHVD-ELRIRTIQGDQNDAEFLDR 281 (419)
T ss_dssp HHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGGC-BTTEEEEECCTTCHHHHHH
T ss_pred HHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhhc-CCCcEEEEecccccchhhh
Confidence 344454444433 36899999999 5555555544 4567899999999997310 00000 00 0123
Q ss_pred ----CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 229 ----KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 229 ----~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+++||+|++.. .+++.++..+|++++++|||||++++.+...
T Consensus 282 l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 282 IARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp HHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred hhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 57899999875 4677788899999999999999999988763
No 232
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.05 E-value=3.3e-09 Score=98.91 Aligned_cols=92 Identities=15% Similarity=0.030 Sum_probs=72.1
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCC---CCCceEEEeCc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFP---KDSIDAVHAGA 239 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~---~~~fD~V~~~~ 239 (334)
.++.+|||+| |+|.++..++..++..+++|+|+++.+++.|+++....+ .++ +++||+|+++.
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP 249 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC
Confidence 3578999999 999999999988766799999999999999998764211 133 35899999986
Q ss_pred cccCCCCHHHHHHHHHHcccCCcEE-EEEEe
Q 019861 240 AIHCWSSPSTGVAEISRVLRPGGVF-VGTTY 269 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r~LkpgG~l-ii~~~ 269 (334)
.+++. ....+++++.++|+|||++ ++...
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 55433 2478899999999999954 55443
No 233
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.04 E-value=3.8e-10 Score=102.28 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=72.1
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc------CC-------------CCCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ------ES-------------NFPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~------~~-------------~~~~~~fD~V~~ 237 (334)
.+.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.. .. +..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 46799999999999999999886567999999999999999987642 11 123578999998
Q ss_pred CccccCCC----CHHHHHHHHHHcccCCcEEEEEEec
Q 019861 238 GAAIHCWS----SPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 238 ~~vl~h~~----d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
.......+ ....++++++++|+|||++++...+
T Consensus 175 d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 175 DSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp ECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 64432211 1246899999999999999997654
No 234
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.02 E-value=5.9e-10 Score=106.26 Aligned_cols=104 Identities=20% Similarity=0.175 Sum_probs=79.0
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCc
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES--------------NFPKDSI 232 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~f 232 (334)
.+...+...++.+|||+|||+|..+..++.... .+.|+++|+++.+++.+++++...+ ...+++|
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~F 171 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYF 171 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCE
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccC
Confidence 334455666789999999999999999998743 3689999999999999998865321 0125789
Q ss_pred eEEEeC------ccccCCCCH----------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 233 DAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 233 D~V~~~------~vl~h~~d~----------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
|+|++. .++.+-++. ..+|+++.++|||||+++.++-..
T Consensus 172 D~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 172 HRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 999962 334433332 578999999999999999887654
No 235
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.02 E-value=5e-09 Score=97.10 Aligned_cols=140 Identities=13% Similarity=0.067 Sum_probs=94.4
Q ss_pred CCcEEEECCCcCHHHHHHH--------Hc-------CCCCeEEEEeCCHHHHHHHHHHHhc-------------------
Q 019861 178 GGNIIDASCGSGLFSRIFA--------KS-------GLFSLVVALDYSENMLKQCYEFVQQ------------------- 223 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~--------~~-------~~~~~v~giD~s~~~~~~a~~~~~~------------------- 223 (334)
..+|+|+|||+|..+..+. +. .+..++..-|+-.+.....-+.+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 4689999999999887762 12 1556888889877654433332221
Q ss_pred ----------CCCCCCCCceEEEeCccccCCCC--------------------------------------HHHHHHHHH
Q 019861 224 ----------ESNFPKDSIDAVHAGAAIHCWSS--------------------------------------PSTGVAEIS 255 (334)
Q Consensus 224 ----------~~~~~~~~fD~V~~~~vl~h~~d--------------------------------------~~~~L~~i~ 255 (334)
...||+++||+|+++.+||++.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 02478999999999999999872 234688999
Q ss_pred HcccCCcEEEEEEeccCCCCCch---------HHHHHHHHHh-----------hhhcCccCCCCHHHHHHHHH-hCCCcE
Q 019861 256 RVLRPGGVFVGTTYIVDGPFNLI---------PFSRLLRQNM-----------MQISGSYTFLSEREIEDLCR-ACGLVD 314 (334)
Q Consensus 256 r~LkpgG~lii~~~~~~~~~~~~---------~~~~~~~~~~-----------~~~~~~~~~~t~~~l~~ll~-~~Gf~~ 314 (334)
+.|+|||+++++........... ..+...+..+ ....-...+.+.++++++++ +.||++
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99999999999999876432111 0111111111 00122345679999999998 599987
Q ss_pred EEE
Q 019861 315 FKC 317 (334)
Q Consensus 315 v~~ 317 (334)
...
T Consensus 293 ~~l 295 (374)
T 3b5i_A 293 DKL 295 (374)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 236
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.98 E-value=2.6e-09 Score=100.98 Aligned_cols=114 Identities=18% Similarity=0.318 Sum_probs=81.5
Q ss_pred cCCCCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHh---cC--CCCCCC
Q 019861 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQ---QE--SNFPKD 230 (334)
Q Consensus 157 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~---~~--~~~~~~ 230 (334)
+.+..+....+.+.+.+...++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.|. ... .+ ...+++
T Consensus 19 g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a~-~~~~~~~D~~~~~~~~ 97 (421)
T 2ih2_A 19 GRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPP-WAEGILADFLLWEPGE 97 (421)
T ss_dssp --CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCCT-TEEEEESCGGGCCCSS
T ss_pred ceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhCC-CCcEEeCChhhcCccC
Confidence 4556677788888888876556799999999999999998763 3469999999999987761 110 00 012346
Q ss_pred CceEEEeC---cccc-------CCCCH-------------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 231 SIDAVHAG---AAIH-------CWSSP-------------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 231 ~fD~V~~~---~vl~-------h~~d~-------------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.||+|+++ .... |+.+. ..+++.+.++|+|||++++..+..
T Consensus 98 ~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 98 AFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp CEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred CCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 89999995 1111 12211 256899999999999999999863
No 237
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.97 E-value=2.4e-09 Score=100.32 Aligned_cols=100 Identities=16% Similarity=0.133 Sum_probs=74.8
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCC
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDS 231 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~ 231 (334)
..+..++. ++.+|||+|||+|.++..++..+. .|+++|+|+.+++.+++++.... .+ .+.
T Consensus 206 ~~l~~~~~--~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~-~~~ 280 (393)
T 4dmg_A 206 RLFEAMVR--PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGL-EGP 280 (393)
T ss_dssp HHHHTTCC--TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTC-CCC
T ss_pred HHHHHHhc--CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHh-cCC
Confidence 34444433 478999999999999999999876 69999999999999998864321 12 334
Q ss_pred ceEEEeCccccC---------CCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 232 IDAVHAGAAIHC---------WSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 232 fD~V~~~~vl~h---------~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
||+|++.--... ..+...+++.+.++|+|||++++.+...
T Consensus 281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 999998632211 1233578899999999999999777654
No 238
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.97 E-value=8.9e-10 Score=104.88 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=77.1
Q ss_pred HHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCC
Q 019861 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDS 231 (334)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~ 231 (334)
.+...+...++.+|||+|||+|..+..++... ..+.|+++|+++.+++.+++++...+ ...+++
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~ 175 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGF 175 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTC
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhcccc
Confidence 34445566778999999999999999988763 23699999999999999998765322 012478
Q ss_pred ceEEEeCc------cccCCCCH----------------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 232 IDAVHAGA------AIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 232 fD~V~~~~------vl~h~~d~----------------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
||+|++.. ++.+-++. ..+|+++.++|||||+++.++-..
T Consensus 176 FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 176 FDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 99999742 23221111 267999999999999999887654
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.94 E-value=4.6e-09 Score=100.85 Aligned_cols=103 Identities=16% Similarity=0.162 Sum_probs=77.7
Q ss_pred HcccCCC--CCCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCC------------CC---CCCC
Q 019861 170 KGYLKPV--LGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES------------NF---PKDS 231 (334)
Q Consensus 170 ~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~------------~~---~~~~ 231 (334)
...+... ++.+|||+|||+|..+..++... ....|+++|+++.+++.+++++...+ .+ .+++
T Consensus 108 ~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~ 187 (479)
T 2frx_A 108 VAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEM 187 (479)
T ss_dssp HHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTC
T ss_pred HHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhcccc
Confidence 3445555 78899999999999999998874 24699999999999999998865321 11 3468
Q ss_pred ceEEEeC------ccccCCCC----------------HHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 232 IDAVHAG------AAIHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 232 fD~V~~~------~vl~h~~d----------------~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
||.|++. .++.+.++ ...+|+++.++|||||++++++-...
T Consensus 188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 9999982 33443332 13689999999999999999887653
No 240
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.93 E-value=3.5e-10 Score=102.50 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=64.6
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeC----CHHHHHHHH-HHH--h--------cCCCCCCCCceEEEeCcc
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY----SENMLKQCY-EFV--Q--------QESNFPKDSIDAVHAGAA 240 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~----s~~~~~~a~-~~~--~--------~~~~~~~~~fD~V~~~~v 240 (334)
.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++... +.. . +...++.++||+|++...
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~ 157 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIG 157 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECCC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECCc
Confidence 45789999999999999999987 27999998 453332111 000 0 112345678999999776
Q ss_pred cc---CCCCHH---HHHHHHHHcccCCcEEEEEEecc
Q 019861 241 IH---CWSSPS---TGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 241 l~---h~~d~~---~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+. +..+.. .+|..+.++|||||.+++.++..
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 53 222222 47899999999999999876643
No 241
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.91 E-value=3.9e-09 Score=98.82 Aligned_cols=95 Identities=14% Similarity=0.135 Sum_probs=71.7
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----C-----------C-----CCCCceEE
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----N-----------F-----PKDSIDAV 235 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----~-----------~-----~~~~fD~V 235 (334)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|+++..... . + ...+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 347899999999999999999865 2489999999999999998865332 1 0 13489999
Q ss_pred EeCccc-----cCCCCH----HHHHHHHHHcccCCcEEEEEEecc
Q 019861 236 HAGAAI-----HCWSSP----STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 236 ~~~~vl-----~h~~d~----~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++.--. .+..+. ..+++.+.++|+|||.++++....
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 984222 233333 456788899999999999887653
No 242
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.91 E-value=9.4e-10 Score=96.55 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=70.0
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCC-
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPK- 229 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~- 229 (334)
....+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.+++++.... ++++
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSS
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccC
Confidence 44556777777777788999999999999999999874 99999999999999998864321 3332
Q ss_pred CCceEEEe----------CccccCCCCHHHHH----HHHHHcccCCcEE
Q 019861 230 DSIDAVHA----------GAAIHCWSSPSTGV----AEISRVLRPGGVF 264 (334)
Q Consensus 230 ~~fD~V~~----------~~vl~h~~d~~~~L----~~i~r~LkpgG~l 264 (334)
..|++|.. ...++|...+..++ +.+.|+|+++|.+
T Consensus 94 ~~~~vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 94 QSYKIFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp CCCEEEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred CCeEEEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 34543321 23444544444444 4477778877743
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.88 E-value=3.7e-09 Score=99.33 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=74.2
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----------C----C-----CCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------N----F-----PKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----------~----~-----~~~~fD~V~~ 237 (334)
++.+|||+|||+|.++..++..+ ..+|+|+|+++.+++.+++++.... . . .+++||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 57899999999999999999875 3599999999999999998865322 0 0 1468999999
Q ss_pred Cc---------cccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 238 GA---------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 238 ~~---------vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.- +.++..+...++.++.++|+|||.+++.+.+.
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 53 22222445678999999999999999888764
No 244
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.87 E-value=1.1e-08 Score=96.13 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=74.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----C-----------CC-----CCCceEEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----N-----------FP-----KDSIDAVH 236 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----~-----------~~-----~~~fD~V~ 236 (334)
++.+|||+|||+|.++..++..+ ..+|+|+|+++.+++.|++++.... . .+ ..+||+|+
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 47899999999999999999986 4599999999999999998765221 0 01 35899999
Q ss_pred eCc---------cccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 237 AGA---------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 237 ~~~---------vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
+.- +.++..+...++.++.+.|+|||+++++....
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 962 33334566788999999999999999977553
No 245
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.86 E-value=7.6e-09 Score=98.73 Aligned_cols=131 Identities=16% Similarity=0.153 Sum_probs=94.4
Q ss_pred chhHHHHHHhHHHhh-----HhcCCCCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC-------------CC
Q 019861 140 PFMSFIYERGWRQNF-----VWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-------------LF 201 (334)
Q Consensus 140 ~~~~~~~~~~w~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~ 201 (334)
++++..|+....+.. ..+.+..|....+.+.+.+.+.++.+|||.|||+|.++..+.+.. ..
T Consensus 129 d~~G~~yE~ll~~~~~~~~~~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~ 208 (445)
T 2okc_A 129 DVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRD 208 (445)
T ss_dssp HHHHHHHHHHHHHHHTCTTTCCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccccCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcC
Confidence 445555655433322 123466788888888888888778899999999999998887642 12
Q ss_pred CeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeCccccCCCC-----------------HHH
Q 019861 202 SLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAGAAIHCWSS-----------------PST 249 (334)
Q Consensus 202 ~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~~vl~h~~d-----------------~~~ 249 (334)
..++|+|+++.+++.|+.++...+ ....++||+|+++--+.+... ...
T Consensus 209 ~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (445)
T 2okc_A 209 KALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLN 288 (445)
T ss_dssp TTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHH
Confidence 479999999999999987653211 011348999999754443221 147
Q ss_pred HHHHHHHcccCCcEEEEEEec
Q 019861 250 GVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 250 ~L~~i~r~LkpgG~lii~~~~ 270 (334)
+++.+.+.|+|||++.+..|.
T Consensus 289 fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 289 FLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHhccCCEEEEEECC
Confidence 899999999999999998886
No 246
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.86 E-value=2.7e-09 Score=99.84 Aligned_cols=93 Identities=18% Similarity=0.188 Sum_probs=72.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC-------------C-----CCCCceEEEeC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-------------F-----PKDSIDAVHAG 238 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~-------------~-----~~~~fD~V~~~ 238 (334)
++.+|||+|||+|.++..++... .+|+|+|+++.+++.|++++..... . .+++||+|++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 57899999999999999999873 4999999999999999988654320 0 14689999984
Q ss_pred cc---------ccCCCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 239 AA---------IHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 239 ~v---------l~h~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
-- .....+...++.++.++|+|||.+++.+...
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 21 1122334678999999999999999987654
No 247
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.85 E-value=1.5e-09 Score=97.30 Aligned_cols=116 Identities=13% Similarity=0.017 Sum_probs=75.4
Q ss_pred ccCCCCCCcEEEECCCc------CHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHH-HhcC---CCCCCCCceEEEeCcc
Q 019861 172 YLKPVLGGNIIDASCGS------GLFSRIFAKS-GLFSLVVALDYSENMLKQCYEF-VQQE---SNFPKDSIDAVHAGAA 240 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~------G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~-~~~~---~~~~~~~fD~V~~~~v 240 (334)
.+...++.+|||+|||+ |. ..+++. ++..+|+|+|+++. +..+ +. ...+ .++ .++||+|++...
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v~~v-~~~i~gD~~~~~~-~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-VSDA-DSTLIGDCATVHT-ANKWDLIISDMY 132 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-BCSS-SEEEESCGGGCCC-SSCEEEEEECCC
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-CCCC-EEEEECccccCCc-cCcccEEEEcCC
Confidence 34456688999999944 66 334443 33569999999998 2100 00 1111 122 368999999643
Q ss_pred ccC--------C---CCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHh
Q 019861 241 IHC--------W---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 309 (334)
Q Consensus 241 l~h--------~---~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~ 309 (334)
.+. . .....+++++.++|||||++++.++... ..+++.+++++
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~--------------------------~~~~l~~~l~~ 186 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS--------------------------WNADLYKLMGH 186 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS--------------------------CCHHHHHHHTT
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC--------------------------CHHHHHHHHHH
Confidence 221 1 1124789999999999999999765421 22478888999
Q ss_pred CCCcEEEEe
Q 019861 310 CGLVDFKCT 318 (334)
Q Consensus 310 ~Gf~~v~~~ 318 (334)
.||..++..
T Consensus 187 ~GF~~v~~~ 195 (290)
T 2xyq_A 187 FSWWTAFVT 195 (290)
T ss_dssp EEEEEEEEE
T ss_pred cCCcEEEEE
Confidence 999877654
No 248
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.85 E-value=1.5e-08 Score=94.01 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=92.5
Q ss_pred CCcEEEECCCcCHHHHHHHHc-----------------CCCCeEEEEeCC-----------HHHHHHHHHHHhc------
Q 019861 178 GGNIIDASCGSGLFSRIFAKS-----------------GLFSLVVALDYS-----------ENMLKQCYEFVQQ------ 223 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~giD~s-----------~~~~~~a~~~~~~------ 223 (334)
..+|+|+||++|..+..+... .|..+|+.-|+- +.+.+.+++....
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999988777554 244577888876 3333333222111
Q ss_pred ---------CCCCCCCCceEEEeCccccCCCCHH---------------------------------------HHHHHHH
Q 019861 224 ---------ESNFPKDSIDAVHAGAAIHCWSSPS---------------------------------------TGVAEIS 255 (334)
Q Consensus 224 ---------~~~~~~~~fD~V~~~~vl~h~~d~~---------------------------------------~~L~~i~ 255 (334)
...||++++|+|+++.+||++.+.. .+|+..+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1258899999999999999986432 1266669
Q ss_pred HcccCCcEEEEEEeccCCC--CCc-hHHHHHHHHH-----------hhhhcCccCCCCHHHHHHHHHhCC-CcEEEE
Q 019861 256 RVLRPGGVFVGTTYIVDGP--FNL-IPFSRLLRQN-----------MMQISGSYTFLSEREIEDLCRACG-LVDFKC 317 (334)
Q Consensus 256 r~LkpgG~lii~~~~~~~~--~~~-~~~~~~~~~~-----------~~~~~~~~~~~t~~~l~~ll~~~G-f~~v~~ 317 (334)
+.|+|||+++++....... ... ...+...+.. +..+.....+.+.++++.++++.| |++...
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 9999999999999987654 211 0022222211 111222455689999999999975 776653
No 249
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.83 E-value=7.3e-09 Score=104.01 Aligned_cols=93 Identities=14% Similarity=0.162 Sum_probs=74.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC-----------------CCCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-----------------FPKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~-----------------~~~~~fD~V~~~~ 239 (334)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.+++++..... ...++||+|++.-
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 478999999999999999988764 5799999999999999998654321 1246899999853
Q ss_pred -----------cccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 240 -----------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 240 -----------vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
++++..+...++..+.++|+|||+++++...
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 2333445667899999999999999987765
No 250
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.78 E-value=5.1e-08 Score=92.61 Aligned_cols=98 Identities=16% Similarity=0.207 Sum_probs=70.6
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------------C
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------------N 226 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------------~ 226 (334)
+.+.+.+++...++.+|||+|||+|.++..++..+. +|+|+|+|+.+++.|+++..... +
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~--~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~ 351 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQP 351 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSG
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCC--EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhh
Confidence 445556666666678999999999999999998854 99999999999999998764321 1
Q ss_pred CCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 227 FPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+++++||+|++.---.. ...+++.+.+ ++|++.++++.
T Consensus 352 ~~~~~fD~Vv~dPPr~g---~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 352 WAKNGFDKVLLDPARAG---AAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp GGTTCCSEEEECCCTTC---CHHHHHHHHH-HCCSEEEEEES
T ss_pred hhcCCCCEEEECCCCcc---HHHHHHHHHh-cCCCeEEEEEC
Confidence 23468999998422111 1245555544 78988888743
No 251
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.77 E-value=2.2e-08 Score=92.16 Aligned_cols=139 Identities=15% Similarity=0.109 Sum_probs=97.6
Q ss_pred CCcEEEECCCcCHHHHHHHHc----------------CCCCeEEEEeCCHHHHHHHHHHHhc----C-------------
Q 019861 178 GGNIIDASCGSGLFSRIFAKS----------------GLFSLVVALDYSENMLKQCYEFVQQ----E------------- 224 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~giD~s~~~~~~a~~~~~~----~------------- 224 (334)
..+|+|+||++|..+..+... .|..+|+..|+..+.....-+.+.. .
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 468999999999776554333 3446788999988877777665542 1
Q ss_pred -CCCCCCCceEEEeCccccCCCCH---------------------------------HHHHHHHHHcccCCcEEEEEEec
Q 019861 225 -SNFPKDSIDAVHAGAAIHCWSSP---------------------------------STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 225 -~~~~~~~fD~V~~~~vl~h~~d~---------------------------------~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
..||++++|+|+++.+||++.+. ..+|+..++.|+|||++++....
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~g 211 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILG 211 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEE
T ss_pred hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEec
Confidence 25889999999999999998642 13488999999999999999998
Q ss_pred cCCCCC-------chHHHHHHHHHhh-----------hhcCccCCCCHHHHHHHHHhCCC-cEEE
Q 019861 271 VDGPFN-------LIPFSRLLRQNMM-----------QISGSYTFLSEREIEDLCRACGL-VDFK 316 (334)
Q Consensus 271 ~~~~~~-------~~~~~~~~~~~~~-----------~~~~~~~~~t~~~l~~ll~~~Gf-~~v~ 316 (334)
...... ....+...+..+. .+.....+.+.++++.++++.|. ++..
T Consensus 212 r~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~ 276 (359)
T 1m6e_X 212 RRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDH 276 (359)
T ss_dssp CSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEE
T ss_pred CCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEE
Confidence 765321 1222333332111 11224457789999999999965 5554
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.77 E-value=4.7e-11 Score=104.93 Aligned_cols=101 Identities=12% Similarity=0.115 Sum_probs=72.7
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------------CCCC-CCCc
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------------SNFP-KDSI 232 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------------~~~~-~~~f 232 (334)
.+.+.+.+...++.+|||||||+|.++..+++.+. +++|+|+++.+++.++++.... .+++ +++|
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f 95 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY 95 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc
Confidence 34556666666788999999999999999999874 9999999999998887765311 1233 2567
Q ss_pred eEEEeC-----------ccccCCCCHHHHH----HHHHHcccCCcEEEEEEe
Q 019861 233 DAVHAG-----------AAIHCWSSPSTGV----AEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 233 D~V~~~-----------~vl~h~~d~~~~L----~~i~r~LkpgG~lii~~~ 269 (334)
.|+++ .+++|..++..++ +.+.++|+|||.+.+...
T Consensus 96 -~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 96 -KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp -EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred -EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 55553 2244445555556 779999999998766443
No 253
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.76 E-value=7.4e-09 Score=93.58 Aligned_cols=96 Identities=17% Similarity=0.153 Sum_probs=69.2
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKDS 231 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~~ 231 (334)
...+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.++++..... .++..+
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~ 106 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPK 106 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCccc
Confidence 3445566666666788999999999999999998865 99999999999999998764211 233458
Q ss_pred ceEEEeCccccCCCCHH--HHH---------------HHHHHcccCCc
Q 019861 232 IDAVHAGAAIHCWSSPS--TGV---------------AEISRVLRPGG 262 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~--~~L---------------~~i~r~LkpgG 262 (334)
||+|+++-.. ++..+. .+| +.+.|+++++|
T Consensus 107 ~D~Vv~n~py-~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 107 FDVCTANIPY-KISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred CCEEEEcCCc-ccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 9999986432 333331 222 34668888877
No 254
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.74 E-value=7e-08 Score=88.57 Aligned_cols=87 Identities=16% Similarity=0.143 Sum_probs=69.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCccccC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGAAIHC 243 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~vl~h 243 (334)
++.+|||+|||+|.++.. +. + ..+|+|+|+|+.+++.+++++.... .+. ++||+|++.--
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~-~~fD~Vi~dpP--- 267 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD-VKGNRVIMNLP--- 267 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC-CCEEEEEECCT---
T ss_pred CCCEEEEccCccCHHHHh-cc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc-CCCcEEEECCc---
Confidence 478999999999999999 76 3 4599999999999999998865432 122 68999998631
Q ss_pred CCCHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 244 WSSPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 244 ~~d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
.....++..+.++|+|||.+++.+...
T Consensus 268 -~~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 268 -KFAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp -TTGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred -HhHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 112367999999999999999988764
No 255
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.68 E-value=1.3e-07 Score=89.42 Aligned_cols=88 Identities=22% Similarity=0.265 Sum_probs=65.6
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------CCCCCCceEEEeCccccCC
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------NFPKDSIDAVHAGAAIHCW 244 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~~~~~fD~V~~~~vl~h~ 244 (334)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++..... .+...+||+|++.---...
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSVKGFDTVIVDPPRAGL 366 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCCTTCSEEEECCCTTCS
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCccCCCEEEEcCCccch
Confidence 3478999999999999999998865 99999999999999998765311 1222379999985432111
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEE
Q 019861 245 SSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 245 ~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
...+++.+. .|+|||.++++.
T Consensus 367 --~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 367 --HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp --CHHHHHHHH-HHCCSEEEEEES
T ss_pred --HHHHHHHHH-hcCCCcEEEEEC
Confidence 134566665 499999998864
No 256
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.61 E-value=7.7e-08 Score=86.45 Aligned_cols=75 Identities=11% Similarity=0.131 Sum_probs=60.4
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCC
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKD 230 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~ 230 (334)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.... ++++.
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~ 113 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKL 113 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGS
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccC
Confidence 34456677777777788999999999999999999865 99999999999999998874211 34456
Q ss_pred CceEEEeCc
Q 019861 231 SIDAVHAGA 239 (334)
Q Consensus 231 ~fD~V~~~~ 239 (334)
+||+|+++.
T Consensus 114 ~fD~Iv~Nl 122 (295)
T 3gru_A 114 DFNKVVANL 122 (295)
T ss_dssp CCSEEEEEC
T ss_pred CccEEEEeC
Confidence 799999774
No 257
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.61 E-value=1.4e-07 Score=86.43 Aligned_cols=94 Identities=16% Similarity=0.231 Sum_probs=70.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------C------------------C--CCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------N------------------F--PKD 230 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~------------------~--~~~ 230 (334)
.+.+||+||||+|.++..+.+.++ .+++++|+++.+++.|++++.... + . .++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 468999999999999999988875 799999999999999999865210 0 0 246
Q ss_pred CceEEEeCccc-cCCCCH-----HHHHHHH----HHcccCCcEEEEEEecc
Q 019861 231 SIDAVHAGAAI-HCWSSP-----STGVAEI----SRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 231 ~fD~V~~~~vl-~h~~d~-----~~~L~~i----~r~LkpgG~lii~~~~~ 271 (334)
+||+|++.-.- ..-..| ..+++.+ .++|+|||++++.....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 89999986432 111122 4566776 89999999999876553
No 258
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.59 E-value=1.9e-07 Score=87.38 Aligned_cols=110 Identities=14% Similarity=-0.013 Sum_probs=77.6
Q ss_pred CcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCC--------------------------------------C
Q 019861 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------S 202 (334)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~ 202 (334)
..+.+...+.......++..|||.+||+|.++..++..+.. .
T Consensus 185 l~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 185 IKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp CCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 34556666677777777889999999999998887765332 4
Q ss_pred eEEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCceEEEeC--ccccCCC---CHHHHHHHHHHcccC--C
Q 019861 203 LVVALDYSENMLKQCYEFVQQES--------------NFPKDSIDAVHAG--AAIHCWS---SPSTGVAEISRVLRP--G 261 (334)
Q Consensus 203 ~v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD~V~~~--~vl~h~~---d~~~~L~~i~r~Lkp--g 261 (334)
.++|+|+++.+++.|+++....+ ....++||+|+++ +... +. +...+.+++.+.|++ |
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~r-l~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGER-LEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCS-HHHHHHHHHHHHHHHHHHHTCTT
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccc-cCCchhHHHHHHHHHHHHhcCCC
Confidence 69999999999999999875332 0123589999998 3221 21 223455666666665 9
Q ss_pred cEEEEEEecc
Q 019861 262 GVFVGTTYIV 271 (334)
Q Consensus 262 G~lii~~~~~ 271 (334)
|.+++.+.+.
T Consensus 344 ~~~~iit~~~ 353 (393)
T 3k0b_A 344 WSVYVLTSYE 353 (393)
T ss_dssp CEEEEEECCT
T ss_pred CEEEEEECCH
Confidence 9998887754
No 259
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.58 E-value=1.7e-07 Score=87.64 Aligned_cols=110 Identities=15% Similarity=0.058 Sum_probs=78.4
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCC--------------------------------------Ce
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SL 203 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 203 (334)
.+.+...+.......++.+|||++||+|.++..++..+.. ..
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 4455666777777777889999999999999888765321 47
Q ss_pred EEEEeCCHHHHHHHHHHHhcCC--------------CCCCCCceEEEeCccc-cCCC---CHHHHHHHHHHcccC--CcE
Q 019861 204 VVALDYSENMLKQCYEFVQQES--------------NFPKDSIDAVHAGAAI-HCWS---SPSTGVAEISRVLRP--GGV 263 (334)
Q Consensus 204 v~giD~s~~~~~~a~~~~~~~~--------------~~~~~~fD~V~~~~vl-~h~~---d~~~~L~~i~r~Lkp--gG~ 263 (334)
++|+|+++.+++.|+++....+ ....++||+|+++--. +.+. +...+.+++.+.|++ ||.
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 9999999999999998765321 1124589999996332 1222 234566677777776 888
Q ss_pred EEEEEecc
Q 019861 264 FVGTTYIV 271 (334)
Q Consensus 264 lii~~~~~ 271 (334)
+++.+.+.
T Consensus 340 ~~iit~~~ 347 (385)
T 3ldu_A 340 YYLITSYE 347 (385)
T ss_dssp EEEEESCT
T ss_pred EEEEECCH
Confidence 88877753
No 260
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.56 E-value=4e-07 Score=84.93 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=78.2
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCC--------------------------------------Ce
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SL 203 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 203 (334)
.+.+...+.......++..+||.+||+|.++..++..+.. ..
T Consensus 179 ~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 179 KENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 3455566666666667889999999999998888765332 36
Q ss_pred EEEEeCCHHHHHHHHHHHhcCC-------------C-CCCCCceEEEeC--ccccCCC---CHHHHHHHHHHcccC--Cc
Q 019861 204 VVALDYSENMLKQCYEFVQQES-------------N-FPKDSIDAVHAG--AAIHCWS---SPSTGVAEISRVLRP--GG 262 (334)
Q Consensus 204 v~giD~s~~~~~~a~~~~~~~~-------------~-~~~~~fD~V~~~--~vl~h~~---d~~~~L~~i~r~Lkp--gG 262 (334)
++|+|+++.+++.|+++....+ . ...++||+|+++ +... +. +...+.+++.+.|++ ||
T Consensus 259 v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~r-l~~~~~l~~ly~~lg~~lk~~~g~ 337 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGER-LLDDKAVDILYNEMGETFAPLKTW 337 (384)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTT-TSCHHHHHHHHHHHHHHHTTCTTS
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhc-cCCHHHHHHHHHHHHHHHhhCCCc
Confidence 9999999999999999875432 0 123589999997 3322 22 234566667777776 99
Q ss_pred EEEEEEecc
Q 019861 263 VFVGTTYIV 271 (334)
Q Consensus 263 ~lii~~~~~ 271 (334)
.+++.+++.
T Consensus 338 ~~~iit~~~ 346 (384)
T 3ldg_A 338 SQFILTNDT 346 (384)
T ss_dssp EEEEEESCT
T ss_pred EEEEEECCH
Confidence 999888753
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.54 E-value=3.3e-07 Score=89.32 Aligned_cols=115 Identities=13% Similarity=0.061 Sum_probs=85.7
Q ss_pred cCCCCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC------------------CCeEEEEeCCHHHHHHHH
Q 019861 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL------------------FSLVVALDYSENMLKQCY 218 (334)
Q Consensus 157 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~~v~giD~s~~~~~~a~ 218 (334)
+.++.|....+.+.+.+.+.++.+|||.+||+|.++..+.+... ...++|+|+++.+++.|+
T Consensus 149 G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 149 GQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp -CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred CeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 45777888888888888887788999999999999887765410 137999999999999999
Q ss_pred HHHhcCC---------------C-----CCCCCceEEEeCccccCCC-------------C-HHHHHHHHHHcccCCcEE
Q 019861 219 EFVQQES---------------N-----FPKDSIDAVHAGAAIHCWS-------------S-PSTGVAEISRVLRPGGVF 264 (334)
Q Consensus 219 ~~~~~~~---------------~-----~~~~~fD~V~~~~vl~h~~-------------d-~~~~L~~i~r~LkpgG~l 264 (334)
.++.... . .+.+.||+|+++=-+.... + ...++..+.+.|+|||++
T Consensus 229 ~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~ 308 (541)
T 2ar0_A 229 MNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRA 308 (541)
T ss_dssp HHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEE
T ss_pred HHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEE
Confidence 7643211 0 1246899999963222111 1 237899999999999999
Q ss_pred EEEEecc
Q 019861 265 VGTTYIV 271 (334)
Q Consensus 265 ii~~~~~ 271 (334)
.+..|+.
T Consensus 309 a~V~p~~ 315 (541)
T 2ar0_A 309 AVVVPDN 315 (541)
T ss_dssp EEEEEHH
T ss_pred EEEecCc
Confidence 9998863
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.50 E-value=2.6e-07 Score=85.90 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=69.4
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC----------------C
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----------------F 227 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~----------------~ 227 (334)
.+.+.+.+.+... +.+|||+|||+|.++..++.... +|+|+|+++.+++.|+++...... +
T Consensus 201 ~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~ 277 (369)
T 3bt7_A 201 QMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAM 277 (369)
T ss_dssp HHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHH
T ss_pred HHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHH
Confidence 3344555555443 57899999999999999988654 999999999999999988653220 1
Q ss_pred CC--------------CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 228 PK--------------DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 228 ~~--------------~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
.+ .+||+|++.--- ..+..++.+.|+++|.++...-+
T Consensus 278 ~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 278 NGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp SSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESC
T ss_pred hhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECC
Confidence 11 379999864210 12345677778899988876654
No 263
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.48 E-value=7.7e-07 Score=86.67 Aligned_cols=132 Identities=17% Similarity=0.070 Sum_probs=93.8
Q ss_pred CchhHHHHHHhHHHhh-----HhcCCCCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCC-------------
Q 019861 139 MPFMSFIYERGWRQNF-----VWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL------------- 200 (334)
Q Consensus 139 ~~~~~~~~~~~w~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------- 200 (334)
.+++...|+....+.. ..+.|.-|....+.+.+.+.+.++ +|||.+||+|.++..+.+...
T Consensus 202 ~D~lG~~yE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~ 280 (544)
T 3khk_A 202 KDILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQ 280 (544)
T ss_dssp CCSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred hhHHHHHHHHHHHHHHHhhCccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHH
Confidence 3566666775544322 224678889999999998887655 999999999999877654210
Q ss_pred --CCeEEEEeCCHHHHHHHHHHHhcCC----------------CCCCCCceEEEeC--ccccC-----------------
Q 019861 201 --FSLVVALDYSENMLKQCYEFVQQES----------------NFPKDSIDAVHAG--AAIHC----------------- 243 (334)
Q Consensus 201 --~~~v~giD~s~~~~~~a~~~~~~~~----------------~~~~~~fD~V~~~--~vl~h----------------- 243 (334)
...++|+|+++.+++.|+.++...+ .+++..||+|+++ +....
T Consensus 281 ~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~ 360 (544)
T 3khk_A 281 KKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTN 360 (544)
T ss_dssp GGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC
T ss_pred hhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcc
Confidence 2489999999999999997653211 1235689999995 22111
Q ss_pred ------CC---C-HHHHHHHHHHcccCCcEEEEEEecc
Q 019861 244 ------WS---S-PSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 244 ------~~---d-~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
++ + ...+++.+.+.|+|||++.+..|+.
T Consensus 361 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 361 GEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp --CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 11 1 1268999999999999999998863
No 264
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.46 E-value=1.3e-06 Score=79.05 Aligned_cols=101 Identities=13% Similarity=0.082 Sum_probs=70.0
Q ss_pred HcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCC--C---CC
Q 019861 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES------------NFP--K---DS 231 (334)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~--~---~~ 231 (334)
...+...++.+|||+|||+|..+..++.. +....|+++|+++.+++.+++++...+ .+. . ++
T Consensus 95 ~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~ 174 (309)
T 2b9e_A 95 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHE 174 (309)
T ss_dssp HHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTT
T ss_pred HHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCC
Confidence 34456677899999999999999998886 334699999999999999998876432 011 1 47
Q ss_pred ceEEEeC------ccccCCC-----------CH-------HHHHHHHHHcccCCcEEEEEEecc
Q 019861 232 IDAVHAG------AAIHCWS-----------SP-------STGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 232 fD~V~~~------~vl~h~~-----------d~-------~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
||.|++. .++..-+ +. ..+|+.+.+.|+ ||+++.++-..
T Consensus 175 fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 175 VHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 9999972 2332211 11 245777777786 99888776554
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.42 E-value=4.5e-07 Score=80.48 Aligned_cols=58 Identities=17% Similarity=0.268 Sum_probs=49.6
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
....+.+.+.+...++ +|||||||+|.++..+++.+. +|+|+|+++.+++.+++++..
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~~ 90 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLSG 90 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTTT
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCC
Confidence 3445667777777778 999999999999999999875 999999999999999988753
No 266
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.41 E-value=5.4e-07 Score=83.87 Aligned_cols=88 Identities=17% Similarity=0.107 Sum_probs=69.2
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC---------------CC--C------------
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE---------------SN--F------------ 227 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~---------------~~--~------------ 227 (334)
++.+|||+|||+|.++..++...+..+|+++|+++.+++.+++++... .. .
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 467999999999999999998854568999999999999999886543 10 0
Q ss_pred -CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 228 -PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 228 -~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
..+.||+|++.- ...+..++..+.+.|++||.++++.
T Consensus 127 ~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 124799999542 1244688999999999999887765
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.36 E-value=5.1e-06 Score=74.12 Aligned_cols=95 Identities=15% Similarity=0.276 Sum_probs=72.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-------CC-------------CCCCCCceEEE
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------ES-------------NFPKDSIDAVH 236 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-------~~-------------~~~~~~fD~V~ 236 (334)
.+++||-||.|.|..++.+.+..+..+++.+|+++.+++.+++.+.. +. .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 36799999999999999999886667999999999999999987632 11 12357899999
Q ss_pred eCccccCCC----CHHHHHHHHHHcccCCcEEEEEEecc
Q 019861 237 AGAAIHCWS----SPSTGVAEISRVLRPGGVFVGTTYIV 271 (334)
Q Consensus 237 ~~~vl~h~~----d~~~~L~~i~r~LkpgG~lii~~~~~ 271 (334)
....=..-+ -...+++.+++.|+|||+++....+.
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 864211100 11468999999999999999876553
No 268
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.35 E-value=4.7e-06 Score=80.99 Aligned_cols=132 Identities=14% Similarity=0.010 Sum_probs=93.8
Q ss_pred chhHHHHHHhHHHhh-----HhcCCCCcHHHHHHHHcccC----CCCCCcEEEECCCcCHHHHHHHHcC---CCCeEEEE
Q 019861 140 PFMSFIYERGWRQNF-----VWGGFPGPEKEFELMKGYLK----PVLGGNIIDASCGSGLFSRIFAKSG---LFSLVVAL 207 (334)
Q Consensus 140 ~~~~~~~~~~w~~~~-----~~~~~~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~gi 207 (334)
++++..|+...++.. ..+.|+-|....+.+.+.+. +.++.+|||.+||+|.++..+.+.. ....++|+
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~ 254 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ 254 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE
Confidence 456666666544322 23567788888888888775 4567899999999999988887762 24589999
Q ss_pred eCCHHHHHHHHHHHhcCC------------------C-CCCCCceEEEeC--ccccC-----------------CC---C
Q 019861 208 DYSENMLKQCYEFVQQES------------------N-FPKDSIDAVHAG--AAIHC-----------------WS---S 246 (334)
Q Consensus 208 D~s~~~~~~a~~~~~~~~------------------~-~~~~~fD~V~~~--~vl~h-----------------~~---d 246 (334)
|+++.++..|+.++.-.+ + .....||+|+++ +.... ++ +
T Consensus 255 Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~ 334 (542)
T 3lkd_A 255 ELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSK 334 (542)
T ss_dssp ESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTC
T ss_pred ECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCch
Confidence 999999999987643111 1 235689999986 11100 11 1
Q ss_pred -HHHHHHHHHHccc-CCcEEEEEEecc
Q 019861 247 -PSTGVAEISRVLR-PGGVFVGTTYIV 271 (334)
Q Consensus 247 -~~~~L~~i~r~Lk-pgG~lii~~~~~ 271 (334)
...++..+.+.|+ |||++.+..|..
T Consensus 335 ~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 335 ADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp CHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred hhHHHHHHHHHHhCCCceeEEEEecch
Confidence 1358999999999 999999988863
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.30 E-value=9e-07 Score=77.88 Aligned_cols=59 Identities=7% Similarity=0.116 Sum_probs=50.6
Q ss_pred HHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++..
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~ 73 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ 73 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh
Confidence 34455677777777788999999999999999999874 999999999999999998753
No 270
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.30 E-value=1.8e-06 Score=80.45 Aligned_cols=88 Identities=16% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHHhcCCC------------------CCCCCceEEEe
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESN------------------FPKDSIDAVHA 237 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~~------------------~~~~~fD~V~~ 237 (334)
++.+|||++||+|.++..++..... .+|+++|+++.+++.++++++...- ...+.||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4779999999999999999886322 4899999999999999988763220 11347999998
Q ss_pred CccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 238 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 238 ~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.- ...+..++..+.+.|++||+++++.
T Consensus 132 DP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 65 2334678999999999999888766
No 271
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.30 E-value=8.3e-07 Score=77.84 Aligned_cols=105 Identities=16% Similarity=0.092 Sum_probs=69.1
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHH------H---Hh---cCCCCCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYE------F---VQ---QESNFPKDS 231 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~------~---~~---~~~~~~~~~ 231 (334)
++.+...+ ....++.+|||+|||+|.|+..++...+...+.|+|+...+...... . +. +...++++.
T Consensus 62 KL~ei~ek-~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~ 140 (277)
T 3evf_A 62 KLRWFHER-GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVK 140 (277)
T ss_dssp HHHHHHHT-TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCC
T ss_pred HHHHHHHh-CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCC
Confidence 33444444 44456789999999999999988876433467788876332100000 0 00 112466789
Q ss_pred ceEEEeCccccCCCCH-------HHHHHHHHHcccCC-cEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSSP-------STGVAEISRVLRPG-GVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~-------~~~L~~i~r~Lkpg-G~lii~~~~ 270 (334)
||+|++..+.+ .... ..+|+.+.++|+|| |.+++..+.
T Consensus 141 ~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 141 CDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99999987655 3332 13468889999999 999997776
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.27 E-value=2.8e-06 Score=74.81 Aligned_cols=125 Identities=14% Similarity=0.097 Sum_probs=81.1
Q ss_pred CCCcEEEECCCcCHHHHHHHHc-------CCC-----CeEEEEeCCH---HHHH-----------HHHHHHhc-------
Q 019861 177 LGGNIIDASCGSGLFSRIFAKS-------GLF-----SLVVALDYSE---NMLK-----------QCYEFVQQ------- 223 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~giD~s~---~~~~-----------~a~~~~~~------- 223 (334)
++.+|||||+|+|..+..+.+. .+. .+++++|..+ +.+. .+++.+..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4579999999999987776543 442 4899999876 4443 44444332
Q ss_pred ------C-C----------------CCCC---CCceEEEeCc-cccCCCC--HHHHHHHHHHcccCCcEEEEEEeccCCC
Q 019861 224 ------E-S----------------NFPK---DSIDAVHAGA-AIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGP 274 (334)
Q Consensus 224 ------~-~----------------~~~~---~~fD~V~~~~-vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~~~~~ 274 (334)
. . ..++ ..||+|+... .-..-++ -..+++.+.++|+|||+++. ...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa--- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS--- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC---
Confidence 0 0 0112 2799999853 2221122 24789999999999999885 211
Q ss_pred CCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeec-CcEEEEEEEcC
Q 019861 275 FNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-RGFVMFTATKP 331 (334)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~-g~~~~~~a~K~ 331 (334)
...+++.|.++||++.+.... +..-|+++.|.
T Consensus 215 -------------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 215 -------------------------AGFVRRGLQEAGFTMQKRKGFGRKREMLCGVME 247 (257)
T ss_dssp -------------------------BHHHHHHHHHHTEEEEEECCSTTCCCEEEEEEC
T ss_pred -------------------------CHHHHHHHHHCCCEEEeCCCCCCCCceEEEEec
Confidence 125778899999998765433 34566666664
No 273
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.26 E-value=1.2e-06 Score=77.18 Aligned_cols=68 Identities=19% Similarity=0.152 Sum_probs=50.6
Q ss_pred CCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCH-------HHHHHHHHHHhc----C-C------------CCCC
Q 019861 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE-------NMLKQCYEFVQQ----E-S------------NFPK 229 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~-------~~~~~a~~~~~~----~-~------------~~~~ 229 (334)
...++.+|||+|||+|.++..++..+. +|+|+|+++ .+++.++++... . . .+++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~ 157 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVK 157 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhc
Confidence 444568999999999999999999864 999999999 888888764321 1 0 1223
Q ss_pred --CCceEEEeCccccC
Q 019861 230 --DSIDAVHAGAAIHC 243 (334)
Q Consensus 230 --~~fD~V~~~~vl~h 243 (334)
++||+|++.-.+.|
T Consensus 158 ~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 158 TQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHCCCSEEEECCCC--
T ss_pred cCCCccEEEECCCCCC
Confidence 68999999765554
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.25 E-value=3.3e-06 Score=84.74 Aligned_cols=110 Identities=15% Similarity=0.013 Sum_probs=75.2
Q ss_pred cHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcC------------------------------------------
Q 019861 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG------------------------------------------ 199 (334)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~------------------------------------------ 199 (334)
.+.+...+.......++..|||.+||+|.++..++..+
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 34555666666666678899999999999988776542
Q ss_pred CCCeEEEEeCCHHHHHHHHHHHhcCC-----------------CCCCCCceEEEeC--ccccCCC--CHHH---HHHHHH
Q 019861 200 LFSLVVALDYSENMLKQCYEFVQQES-----------------NFPKDSIDAVHAG--AAIHCWS--SPST---GVAEIS 255 (334)
Q Consensus 200 ~~~~v~giD~s~~~~~~a~~~~~~~~-----------------~~~~~~fD~V~~~--~vl~h~~--d~~~---~L~~i~ 255 (334)
+...++|+|+++.+++.|+.++...+ +..+++||+|+++ +....-. +... .|.++.
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~l 334 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIM 334 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHH
Confidence 12479999999999999999865332 1223389999997 3322111 1223 344555
Q ss_pred HcccCCcEEEEEEecc
Q 019861 256 RVLRPGGVFVGTTYIV 271 (334)
Q Consensus 256 r~LkpgG~lii~~~~~ 271 (334)
+.+.|||.+++.+++.
T Consensus 335 k~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 335 KNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHCTTCEEEEEESCH
T ss_pred HhhCCCCeEEEEeCCH
Confidence 5566899999988765
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.22 E-value=1.5e-06 Score=77.51 Aligned_cols=58 Identities=10% Similarity=0.170 Sum_probs=47.9
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHH
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--SLVVALDYSENMLKQCYEFV 221 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~giD~s~~~~~~a~~~~ 221 (334)
...+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+++.+++.++++.
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~ 88 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF 88 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc
Confidence 34456667777777889999999999999999998751 23999999999999999873
No 276
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.21 E-value=2.7e-06 Score=76.60 Aligned_cols=58 Identities=21% Similarity=0.275 Sum_probs=49.1
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
.+.+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|++++..
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~ 72 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKE 72 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGG
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHh
Confidence 3445556666678899999999999999999986556999999999999999998764
No 277
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.18 E-value=1.2e-05 Score=80.38 Aligned_cols=115 Identities=13% Similarity=-0.033 Sum_probs=81.1
Q ss_pred cCCCCcHHHHHHHHcc----cCC--CCCCcEEEECCCcCHHHHHHHHcCC---CCeEEEEeCCHHHHHHH--HHHHhc--
Q 019861 157 GGFPGPEKEFELMKGY----LKP--VLGGNIIDASCGSGLFSRIFAKSGL---FSLVVALDYSENMLKQC--YEFVQQ-- 223 (334)
Q Consensus 157 ~~~~~~~~~~~~l~~~----l~~--~~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~giD~s~~~~~~a--~~~~~~-- 223 (334)
+.++-|....+.+... ++. .++.+|||.|||+|.++..++.... ...++|+|+++.+++.| +.++..
T Consensus 295 GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~ 374 (878)
T 3s1s_A 295 GVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ 374 (878)
T ss_dssp BSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT
T ss_pred ceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh
Confidence 4566777777777665 322 3477999999999999999988653 35799999999999999 433221
Q ss_pred --CC---------------CCCCCCceEEEeC--ccccC-C-------------------------CC-HHHHHHHHHHc
Q 019861 224 --ES---------------NFPKDSIDAVHAG--AAIHC-W-------------------------SS-PSTGVAEISRV 257 (334)
Q Consensus 224 --~~---------------~~~~~~fD~V~~~--~vl~h-~-------------------------~d-~~~~L~~i~r~ 257 (334)
.. ....+.||+|+++ ++... . .+ ...+++.+.+.
T Consensus 375 LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~l 454 (878)
T 3s1s_A 375 LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTEL 454 (878)
T ss_dssp TCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHH
T ss_pred hhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHh
Confidence 00 1124689999995 21100 0 01 23578889999
Q ss_pred ccCCcEEEEEEecc
Q 019861 258 LRPGGVFVGTTYIV 271 (334)
Q Consensus 258 LkpgG~lii~~~~~ 271 (334)
|++||++.+..|..
T Consensus 455 LKpGGrLAfIlP~s 468 (878)
T 3s1s_A 455 VQDGTVISAIMPKQ 468 (878)
T ss_dssp SCTTCEEEEEEETH
T ss_pred cCCCcEEEEEEChH
Confidence 99999999999873
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.10 E-value=1.7e-06 Score=76.04 Aligned_cols=105 Identities=15% Similarity=0.005 Sum_probs=71.5
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHH------H---Hh---cCCCCCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYE------F---VQ---QESNFPKDS 231 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~------~---~~---~~~~~~~~~ 231 (334)
++.+...++ ...++.+|||+|||+|.|+..++...+...+.|+|+...+...+.. . +. ....++...
T Consensus 78 KL~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~ 156 (282)
T 3gcz_A 78 KLRWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIP 156 (282)
T ss_dssp HHHHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCC
T ss_pred HHHHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCC
Confidence 444555554 4557789999999999999998876544578899987543211110 0 00 001345688
Q ss_pred ceEEEeCccccCCCCH-------HHHHHHHHHcccCC--cEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSSP-------STGVAEISRVLRPG--GVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~-------~~~L~~i~r~Lkpg--G~lii~~~~ 270 (334)
+|+|++..... .... ..+|+-+.++|+|| |.+++-.+.
T Consensus 157 ~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 157 GDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred cCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 99999987766 4432 13567778999999 999998876
No 279
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.04 E-value=3.3e-06 Score=74.01 Aligned_cols=56 Identities=9% Similarity=0.265 Sum_probs=47.5
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHH
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF 220 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~ 220 (334)
...+.+.+.+...++.+|||||||+|.++..+++.+ ..+++|+|+++.+++.++++
T Consensus 18 ~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~ 73 (249)
T 3ftd_A 18 GVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI 73 (249)
T ss_dssp HHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc
Confidence 344566677777778899999999999999999985 35999999999999999876
No 280
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.03 E-value=1.5e-05 Score=78.43 Aligned_cols=85 Identities=15% Similarity=0.077 Sum_probs=54.9
Q ss_pred CCcEEEECCCcCHHHHHHHHc----CCCCeEEEEeCCHHHHHHHHHHHhcCC---------------CCCCCCceEEEeC
Q 019861 178 GGNIIDASCGSGLFSRIFAKS----GLFSLVVALDYSENMLKQCYEFVQQES---------------NFPKDSIDAVHAG 238 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~----~~~~~v~giD~s~~~~~~a~~~~~~~~---------------~~~~~~fD~V~~~ 238 (334)
...|||||||+|-+.....++ +...+|+++|-|+. ...+++...... .. .+++|+|++-
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~-A~~a~~~v~~N~~~dkVtVI~gd~eev~L-PEKVDIIVSE 435 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN-AVVTLENWQFEEWGSQVTVVSSDMREWVA-PEKADIIVSE 435 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH-HHHHHHHHHHHTTGGGEEEEESCTTTCCC-SSCEEEEECC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH-HHHHHHHHHhccCCCeEEEEeCcceeccC-CcccCEEEEE
Confidence 457999999999884444333 22237899999974 445555443221 22 3689999983
Q ss_pred c---cccCCCCHHHHHHHHHHcccCCcEEE
Q 019861 239 A---AIHCWSSPSTGVAEISRVLRPGGVFV 265 (334)
Q Consensus 239 ~---vl~h~~d~~~~L~~i~r~LkpgG~li 265 (334)
. .+-+-.-+ .+|....|.|||||.++
T Consensus 436 wMG~fLl~E~ml-evL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 436 LLGSFADNELSP-ECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCBTTBGGGCHH-HHHHHHGGGEEEEEEEE
T ss_pred cCcccccccCCH-HHHHHHHHhcCCCcEEc
Confidence 2 12111224 57888899999999764
No 281
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.00 E-value=4.9e-06 Score=73.02 Aligned_cols=56 Identities=5% Similarity=0.137 Sum_probs=43.8
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ 222 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~ 222 (334)
..+.+.+.+...++.+|||||||+|.++. +.. +...+|+|+|+++.+++.+++++.
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~~ 64 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHPF 64 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCTT
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHhc
Confidence 34455666666678899999999999999 654 442239999999999999998654
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.97 E-value=5.4e-05 Score=63.84 Aligned_cols=83 Identities=7% Similarity=-0.010 Sum_probs=61.0
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------C------------------C
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------N------------------F 227 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~------------------~ 227 (334)
..+||||||| +.+..+++.. .++++.+|.++...+.+++++...+ + +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 6799999985 5666666642 4699999999999999998775421 1 1
Q ss_pred -----------CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 228 -----------PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 228 -----------~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
..++||+|+...- .....+..+.+.|+|||++++-.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~-----k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR-----FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS-----SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeCC-----CchhHHHHHHHhcCCCeEEEEeC
Confidence 1267999998763 22355666779999999996643
No 283
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.89 E-value=3.4e-05 Score=76.08 Aligned_cols=88 Identities=10% Similarity=-0.007 Sum_probs=56.3
Q ss_pred CCcEEEECCCcCHHHHHHHH----cC---------CCCeEEEEeCCHHHHHHHHHHHhcC-C-------------CCC--
Q 019861 178 GGNIIDASCGSGLFSRIFAK----SG---------LFSLVVALDYSENMLKQCYEFVQQE-S-------------NFP-- 228 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~----~~---------~~~~v~giD~s~~~~~~a~~~~~~~-~-------------~~~-- 228 (334)
+..|||||||+|-++..... ++ ...+|+++|.++.+....+...... . .++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 45899999999998643211 22 2348999999997665555443211 1 122
Q ss_pred ---CCCceEEEeCccccCCC--CHHHHHHHHHHcccCCcEEE
Q 019861 229 ---KDSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFV 265 (334)
Q Consensus 229 ---~~~fD~V~~~~vl~h~~--d~~~~L~~i~r~LkpgG~li 265 (334)
.+++|+|++-..=.... --...|..+.+.|||||.++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 46899999854311111 12357888889999999755
No 284
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.86 E-value=2e-06 Score=97.02 Aligned_cols=137 Identities=15% Similarity=0.145 Sum_probs=65.6
Q ss_pred CCCcEEEECCCcCHHHHHHHHcC---C--CCeEEEEeCCHHHHHHHHHHHhcC------------CCCCCCCceEEEeCc
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSG---L--FSLVVALDYSENMLKQCYEFVQQE------------SNFPKDSIDAVHAGA 239 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~---~--~~~v~giD~s~~~~~~a~~~~~~~------------~~~~~~~fD~V~~~~ 239 (334)
+..+|||||.|+|..+..+.+.. + ..+|+..|+|+...+.+++++... .++....||+|++..
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~ 1319 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNC 1319 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEEC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcc
Confidence 46799999999997655544331 1 347999999988877777664321 123456799999999
Q ss_pred cccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe
Q 019861 240 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 318 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~ 318 (334)
+||-.++....|++++++|||||++++.+..........+ .++. ........+.+.++|.++|+.+||..+...
T Consensus 1320 vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~---~~~~--~~~r~~~~~~~~~~w~~~l~~~gf~~~~~~ 1393 (2512)
T 2vz8_A 1320 ALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMV---GFLT--SPEQGGRHLLSQDQWESLFAGASLHLVALK 1393 (2512)
T ss_dssp C--------------------CCEEEEEEC-------------------------------CTTTTSSTTTTEEEEEEE
T ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeccccccccccc---cccc--cccccCCcccCHHHHHHHHHhCCCceeeec
Confidence 9988888999999999999999999987654321100000 0000 000012235677888999999999887653
No 285
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.86 E-value=1.8e-05 Score=69.50 Aligned_cols=91 Identities=14% Similarity=0.071 Sum_probs=57.7
Q ss_pred HHHcccCCCCC--CcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-------------cC--------
Q 019861 168 LMKGYLKPVLG--GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------------QE-------- 224 (334)
Q Consensus 168 ~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-------------~~-------- 224 (334)
.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|.++.+.+.+++.+. ..
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 34444544455 8999999999999999999875 89999999976554443321 00
Q ss_pred ----CCCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCc
Q 019861 225 ----SNFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 262 (334)
Q Consensus 225 ----~~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG 262 (334)
..++ ++||+|++.-...+ .....++++..+.|++.+
T Consensus 155 ~~~L~~~~-~~fDvV~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDIT-PRPQVVYLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCS-SCCSEEEECCCCCC-CCC-----HHHHHHHHHS
T ss_pred HHHHHhCc-ccCCEEEEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 0122 36999999766655 322345566666665543
No 286
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=97.82 E-value=7.2e-06 Score=55.88 Aligned_cols=44 Identities=20% Similarity=0.193 Sum_probs=37.3
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcccccccC
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~ 121 (334)
++.|+||.|+++|.... ..+.+.|+.|+..|+.++|++.++.+.
T Consensus 8 LeiL~CP~ck~~L~~~~---------~~g~LvC~~c~~~YPI~dGIPvmL~~E 51 (67)
T 2jny_A 8 LEVLACPKDKGPLRYLE---------SEQLLVNERLNLAYRIDDGIPVLLIDE 51 (67)
T ss_dssp TCCCBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCSSC
T ss_pred HHHhCCCCCCCcCeEeC---------CCCEEEcCCCCccccCCCCEeeeChhH
Confidence 56799999999987654 236799999999999999999998764
No 287
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=97.82 E-value=7.5e-06 Score=56.06 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=37.3
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcccccccC
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~ 121 (334)
++.|+||.|+++|.... ..+.+.|+.|+..|+.++|++.++.+.
T Consensus 6 L~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2jr6_A 6 LDILVCPVTKGRLEYHQ---------DKQELWSRQAKLAYPIKDGIPYMLENE 49 (68)
T ss_dssp SCCCBCSSSCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCTTT
T ss_pred hhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 56799999999987654 236799999999999999999998763
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.79 E-value=3.2e-05 Score=68.35 Aligned_cols=105 Identities=16% Similarity=0.117 Sum_probs=68.9
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHH-------HHH--h---cCCCCCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCY-------EFV--Q---QESNFPKDS 231 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~-------~~~--~---~~~~~~~~~ 231 (334)
++.+...+ --..++.+|||+||++|.|+..+.+...-..|.|+|+...+..... ... . ....+..+.
T Consensus 69 KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~ 147 (300)
T 3eld_A 69 KIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEP 147 (300)
T ss_dssp HHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCC
T ss_pred HHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCC
Confidence 33444444 2234688999999999999999998644457889998653211000 000 0 011345678
Q ss_pred ceEEEeCccccCCCCH-------HHHHHHHHHcccCC-cEEEEEEec
Q 019861 232 IDAVHAGAAIHCWSSP-------STGVAEISRVLRPG-GVFVGTTYI 270 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~-------~~~L~~i~r~Lkpg-G~lii~~~~ 270 (334)
+|+|++...-. ...+ ..+|.-+.++|+|| |.+++-.+.
T Consensus 148 ~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 148 SDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 99999976655 4433 24577778999999 999998776
No 289
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=97.78 E-value=7.7e-06 Score=56.35 Aligned_cols=44 Identities=25% Similarity=0.424 Sum_probs=37.4
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcccccccC
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~ 121 (334)
++.|+||.|+++|.... ..+.+.|+.|+..|+.++|++.++.+.
T Consensus 6 L~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (70)
T 2js4_A 6 LDILVCPVCKGRLEFQR---------AQAELVCNADRLAFPVRDGVPIMLEAE 49 (70)
T ss_dssp CCCCBCTTTCCBEEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred hhheECCCCCCcCEEeC---------CCCEEEcCCCCceecCCCCeeeeChhh
Confidence 56799999999987654 236799999999999999999998763
No 290
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=97.77 E-value=8.3e-06 Score=56.00 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=37.1
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcccccccC
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~ 121 (334)
++.|+||.|+++|.... ..+.+.|+.|+..|+.++|++.++.+.
T Consensus 6 LeiL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~e 49 (69)
T 2pk7_A 6 LDILACPICKGPLKLSA---------DKTELISKGAGLAYPIRDGIPVMLESE 49 (69)
T ss_dssp GGTCCCTTTCCCCEECT---------TSSEEEETTTTEEEEEETTEECCCGGG
T ss_pred HhheeCCCCCCcCeEeC---------CCCEEEcCCCCcEecCcCCeeeeChhh
Confidence 46799999999987644 236799999999999999999998763
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.77 E-value=0.00014 Score=70.49 Aligned_cols=131 Identities=19% Similarity=0.167 Sum_probs=91.5
Q ss_pred chhHHHHHHhHHHhh----HhcCCCCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc----C---------CCC
Q 019861 140 PFMSFIYERGWRQNF----VWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS----G---------LFS 202 (334)
Q Consensus 140 ~~~~~~~~~~w~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~----~---------~~~ 202 (334)
+.++..|+...++.. ..+.|.-|....+.+.+.+.+.++.+|+|-+||+|.|+..+.+. . ...
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~ 255 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhh
Confidence 455666666544322 12458889999999999999888899999999999998776543 1 123
Q ss_pred eEEEEeCCHHHHHHHHHHHhcCC--------------C----CCCCCceEEEeCccc--c-------CCC------CH-H
Q 019861 203 LVVALDYSENMLKQCYEFVQQES--------------N----FPKDSIDAVHAGAAI--H-------CWS------SP-S 248 (334)
Q Consensus 203 ~v~giD~s~~~~~~a~~~~~~~~--------------~----~~~~~fD~V~~~~vl--~-------h~~------d~-~ 248 (334)
.++|+|+++.+...|+-++.-.+ + .+...||+|+++==+ . .++ +. .
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~ 335 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAM 335 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHH
T ss_pred hhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHH
Confidence 69999999999999886532111 0 123479999986211 1 111 11 2
Q ss_pred HHHHHHHHccc-------CCcEEEEEEec
Q 019861 249 TGVAEISRVLR-------PGGVFVGTTYI 270 (334)
Q Consensus 249 ~~L~~i~r~Lk-------pgG~lii~~~~ 270 (334)
.++..+.+.|+ +||++.+..|.
T Consensus 336 ~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 336 LFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp HHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred HHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 56788888886 79999999986
No 292
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=97.75 E-value=7.1e-06 Score=56.19 Aligned_cols=44 Identities=20% Similarity=0.396 Sum_probs=37.1
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcccccccC
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~ 121 (334)
++.|+||.|+++|.... ..+.+.|+.|+..|+.++|++.++.+.
T Consensus 6 L~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2hf1_A 6 LEILVCPLCKGPLVFDK---------SKDELICKGDRLAFPIKDGIPMMLESE 49 (68)
T ss_dssp EEECBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred hhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 45789999999987654 236799999999999999999998764
No 293
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.73 E-value=9e-05 Score=68.19 Aligned_cols=93 Identities=14% Similarity=0.170 Sum_probs=68.7
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------C--------------------CCCC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------N--------------------FPKD 230 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~--------------------~~~~ 230 (334)
++++||-||.|.|..++.+.+... .+++.+|+++.+++.+++.+.... + -..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 467999999999999999988654 689999999999999998764210 0 0135
Q ss_pred CceEEEeCccccC-CCCH---------HHHHHHHHHcccCCcEEEEEEec
Q 019861 231 SIDAVHAGAAIHC-WSSP---------STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 231 ~fD~V~~~~vl~h-~~d~---------~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+||+|+....-.. -.+| ..+++.++++|+|||+++.....
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 7999998632111 1122 36789999999999999876443
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.71 E-value=7.5e-05 Score=67.03 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=51.3
Q ss_pred CcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
.+..+.+.+..... .++..|||++||+|.++..++..+. +++|+|+++.+++.|++++..
T Consensus 220 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 220 FPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp SCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHH
Confidence 45677777776665 4688999999999999999999886 999999999999999998765
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.62 E-value=0.00012 Score=67.35 Aligned_cols=106 Identities=16% Similarity=0.086 Sum_probs=77.4
Q ss_pred HHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------------------CC
Q 019861 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------------------NF 227 (334)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------------------~~ 227 (334)
....+.+.+|.+|||+.+|.|.=+.+++..+....++++|+++.-++..++++.... ..
T Consensus 140 ~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 140 PVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 344567788999999999999998888888766689999999998888887664211 12
Q ss_pred CCCCceEEEeC----c----cccCCCC------H----------HHHHHHHHHcccCCcEEEEEEeccCCC
Q 019861 228 PKDSIDAVHAG----A----AIHCWSS------P----------STGVAEISRVLRPGGVFVGTTYIVDGP 274 (334)
Q Consensus 228 ~~~~fD~V~~~----~----vl~h~~d------~----------~~~L~~i~r~LkpgG~lii~~~~~~~~ 274 (334)
..+.||.|++. . ++..-++ + ..+|....+.|||||+|+-++=.....
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 34689999963 2 1211111 1 257888999999999999888766433
No 296
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.59 E-value=0.00046 Score=63.28 Aligned_cols=79 Identities=14% Similarity=0.161 Sum_probs=55.2
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHH-----HhcC---CCCCCCCceEEEeCccccCCCCH
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF-----VQQE---SNFPKDSIDAVHAGAAIHCWSSP 247 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~-----~~~~---~~~~~~~fD~V~~~~vl~h~~d~ 247 (334)
.+|.++||+||++|.|+..+.+.+. .|++||+.+-.- ..... +..+ ...+.+.+|+|+|..+ .+|
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~l~~-~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~----~~p 282 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGPMAQ-SLMDTGQVTWLREDGFKFRPTRSNISWMVCDMV----EKP 282 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSCCCH-HHHTTTCEEEECSCTTTCCCCSSCEEEEEECCS----SCH
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhhcCh-hhccCCCeEEEeCccccccCCCCCcCEEEEcCC----CCh
Confidence 4589999999999999999999875 999999765221 11110 0011 1234568999999875 467
Q ss_pred HHHHHHHHHcccCC
Q 019861 248 STGVAEISRVLRPG 261 (334)
Q Consensus 248 ~~~L~~i~r~Lkpg 261 (334)
...+.-+.+.|..+
T Consensus 283 ~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 283 AKVAALMAQWLVNG 296 (375)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHhHHHHHHHHhcc
Confidence 77777777777665
No 297
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.56 E-value=7.2e-05 Score=59.14 Aligned_cols=83 Identities=10% Similarity=0.099 Sum_probs=55.0
Q ss_pred CCcEEEECCCcC-HHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHhcCCCC---CC--CCceEEEeCccccCCCCHHHH
Q 019861 178 GGNIIDASCGSG-LFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNF---PK--DSIDAVHAGAAIHCWSSPSTG 250 (334)
Q Consensus 178 ~~~vLDiGcG~G-~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~---~~--~~fD~V~~~~vl~h~~d~~~~ 250 (334)
+.+|||||||.| ..+..|++ .+. .|+++|+++..++ +..+.-| .+ +.||+|.+..-=. +....
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av~-----~v~dDiF~P~~~~Y~~~DLIYsirPP~---El~~~ 105 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHGG-----IVRDDITSPRMEIYRGAALIYSIRPPA---EIHSS 105 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSSTT-----EECCCSSSCCHHHHTTEEEEEEESCCT---TTHHH
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccccc-----eEEccCCCCcccccCCcCEEEEcCCCH---HHHHH
Confidence 579999999999 69999997 665 8999999998776 2222222 22 3799998765311 33344
Q ss_pred HHHHHHcccCCcEEEEEEeccC
Q 019861 251 VAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 251 L~~i~r~LkpgG~lii~~~~~~ 272 (334)
+.++.+.. |.-++|.....+
T Consensus 106 i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 106 LMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp HHHHHHHH--TCEEEEECBTTB
T ss_pred HHHHHHHc--CCCEEEEcCCCC
Confidence 55555433 456666555544
No 298
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.53 E-value=0.00016 Score=67.56 Aligned_cols=44 Identities=9% Similarity=0.128 Sum_probs=40.2
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
+.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|++++..
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~ 137 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPL 137 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHH
Confidence 78999999999999999998865 999999999999999988763
No 299
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.50 E-value=0.00021 Score=63.44 Aligned_cols=114 Identities=11% Similarity=0.162 Sum_probs=76.8
Q ss_pred CCCCcEEEECCCcCHHHHHHHHcC-----CCCeEEEEeCCHH--------------------------HHHHHHHHHhcC
Q 019861 176 VLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSEN--------------------------MLKQCYEFVQQE 224 (334)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~giD~s~~--------------------------~~~~a~~~~~~~ 224 (334)
..++.|||+|+..|..+..++... +..+++++|..+. .++.+++++...
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 346799999999999887776542 3568999996421 345566665532
Q ss_pred C------------------CCCCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHH
Q 019861 225 S------------------NFPKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ 286 (334)
Q Consensus 225 ~------------------~~~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~ 286 (334)
+ .+++++||+|+...-. -......|+.+...|+|||++++-+... .+
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~~~------~~------- 249 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDYMM------CP------- 249 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSCTT------CH-------
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCCCC------CH-------
Confidence 1 2345789999988642 1223578999999999999998855421 01
Q ss_pred HhhhhcCccCCCCHHHHHHHHHhCCCcEE
Q 019861 287 NMMQISGSYTFLSEREIEDLCRACGLVDF 315 (334)
Q Consensus 287 ~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v 315 (334)
. ..+.+.+++++.|++..
T Consensus 250 ---G--------~~~Av~Ef~~~~~i~~~ 267 (282)
T 2wk1_A 250 ---P--------CKDAVDEYRAKFDIADE 267 (282)
T ss_dssp ---H--------HHHHHHHHHHHTTCCSC
T ss_pred ---H--------HHHHHHHHHHhcCCceE
Confidence 0 14577788888887643
No 300
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=97.48 E-value=4.4e-05 Score=50.16 Aligned_cols=43 Identities=26% Similarity=0.444 Sum_probs=36.6
Q ss_pred CCCceeCCCCCCCccccCCCCcccccccCCccccc--ccccccccccCcccccccC
Q 019861 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCN--TCKKTYSGVGTHFDMTAAS 121 (334)
Q Consensus 68 ~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~~~~~~~~~ 121 (334)
-++.|.||.|+++|.... +.+.|+ .|+..|+.++|++.++.+.
T Consensus 7 lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 7 LLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp CTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 356799999999987643 679999 9999999999999988754
No 301
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.44 E-value=0.00018 Score=62.29 Aligned_cols=103 Identities=16% Similarity=0.085 Sum_probs=61.4
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCC----CeEEEEe--CCHHHHH-HHHHHHh-----cCCCCCCCCce
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF----SLVVALD--YSENMLK-QCYEFVQ-----QESNFPKDSID 233 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~----~~v~giD--~s~~~~~-~a~~~~~-----~~~~~~~~~fD 233 (334)
.++..+. -..++.+|||+||+.|.|+..+++.-.- +.++|+| +.+.... ..-..+. +....+...+|
T Consensus 63 ~EIdeK~-likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~D 141 (269)
T 2px2_A 63 RWLVERR-FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEISD 141 (269)
T ss_dssp HHHHHTT-SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCCS
T ss_pred HHHHHcC-CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCCC
Confidence 3344443 4456899999999999999999886211 2344445 2111000 0000000 00123345799
Q ss_pred EEEeCccccCCCCHH-------HHHHHHHHcccCCc-EEEEEEec
Q 019861 234 AVHAGAAIHCWSSPS-------TGVAEISRVLRPGG-VFVGTTYI 270 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~-------~~L~~i~r~LkpgG-~lii~~~~ 270 (334)
+|+|...-. ..++. .+|.-+.++|+||| .+++-.+.
T Consensus 142 vVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 142 TLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 999987643 33331 25666778999999 99998887
No 302
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.44 E-value=0.00028 Score=62.24 Aligned_cols=64 Identities=17% Similarity=0.180 Sum_probs=50.4
Q ss_pred HHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCCCCCCCceEEEeCc
Q 019861 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKDSIDAVHAGA 239 (334)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~~~~fD~V~~~~ 239 (334)
+.+.+.+...+++.+||.+||.|..+..+++. ..+|+|+|.++.+++.+++ +.. +.+.+|..++
T Consensus 12 ~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f 75 (285)
T 1wg8_A 12 QEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNF 75 (285)
T ss_dssp HHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCG
T ss_pred HHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCc
Confidence 45555666677899999999999999999998 3599999999999999998 643 3455555443
No 303
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.38 E-value=0.00027 Score=62.27 Aligned_cols=106 Identities=16% Similarity=0.077 Sum_probs=70.3
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHH---------HHHHHHhcC---CCCCCCC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLK---------QCYEFVQQE---SNFPKDS 231 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~---------~a~~~~~~~---~~~~~~~ 231 (334)
++.+...+ ....++.+|||+||++|.|+..++.......|+|+|+-..-.+ ..--.+... ..++...
T Consensus 82 KL~ei~~~-~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~ 160 (321)
T 3lkz_A 82 KLRWLVER-RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSEC 160 (321)
T ss_dssp HHHHHHHT-TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCC
T ss_pred HHHHHHHh-cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCC
Confidence 33444444 4445678999999999999997777643457999998765111 000000011 1234477
Q ss_pred ceEEEeCccccCCCCHH-------HHHHHHHHcccCC-cEEEEEEecc
Q 019861 232 IDAVHAGAAIHCWSSPS-------TGVAEISRVLRPG-GVFVGTTYIV 271 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~-------~~L~~i~r~Lkpg-G~lii~~~~~ 271 (334)
+|+|+|.-. +--++|. .+|+-+.+.|++| |.+++-....
T Consensus 161 ~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 161 CDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp CSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 999999877 7777763 3566667889988 8888877664
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.13 E-value=0.0012 Score=57.84 Aligned_cols=62 Identities=19% Similarity=0.193 Sum_probs=51.9
Q ss_pred CCCcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 159 FPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 159 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
...|..+.+.+.+... .++..|||..||+|..+..+...+. +++|+|+++..++.+++++..
T Consensus 195 ~~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 195 TPKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHh
Confidence 3446677777766654 4578999999999999999999886 999999999999999998764
No 305
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=97.06 E-value=0.00021 Score=52.21 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=38.3
Q ss_pred CCceeCCCCCCCccccCC------------------CCcccccccCCcccccccccccccccCccccccc
Q 019861 69 KNVLACPICYKPLTWIGD------------------SSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAA 120 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~------------------~~~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~ 120 (334)
++.|+||.|+++|..... .+........+.+.|+.|+..|+.++|++.++.+
T Consensus 6 LdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ 75 (97)
T 2k5r_A 6 LHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPE 75 (97)
T ss_dssp CSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGG
T ss_pred hhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChH
Confidence 568999999998865331 0111122235689999999999999999999876
No 306
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.06 E-value=0.0048 Score=56.13 Aligned_cols=134 Identities=13% Similarity=0.144 Sum_probs=87.0
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----------------------C-------C
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----------------------S-------N 226 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----------------------~-------~ 226 (334)
+...|+.+|||.......+...++...++-+|. +..++.-++.+... . .
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 457899999999998888887655567778887 77666655543321 0 0
Q ss_pred -------------C-CCCCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhh
Q 019861 227 -------------F-PKDSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ 290 (334)
Q Consensus 227 -------------~-~~~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~ 290 (334)
. ..+...++++-.+|.+++.. ..+|+.+.+.+ |+|.+++.++.... ....++...+...+..
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~-~~~~~fg~~m~~~l~~ 253 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGS-QPNDRFGAIMQSNLKE 253 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCC-STTCCHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCC-CCcchHHHHHHHHhhc
Confidence 1 22456788888899988743 46788888877 77877766655431 1112232223222221
Q ss_pred -----hcCccCCCCHHHHHHHHHhCCCc
Q 019861 291 -----ISGSYTFLSEREIEDLCRACGLV 313 (334)
Q Consensus 291 -----~~~~~~~~t~~~l~~ll~~~Gf~ 313 (334)
..+...+.+.++..+.|.++||+
T Consensus 254 ~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 254 SRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred ccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 12233567999999999999997
No 307
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.05 E-value=0.00092 Score=57.00 Aligned_cols=105 Identities=14% Similarity=0.088 Sum_probs=67.4
Q ss_pred HHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHH--H-------HHhcC---CCCCCCCc
Q 019861 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCY--E-------FVQQE---SNFPKDSI 232 (334)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~--~-------~~~~~---~~~~~~~f 232 (334)
+.+...++ ...++.+|||+||++|.|+..++.......|+|+|+-..-.+.-+ + .+... ...+..++
T Consensus 67 L~ei~ek~-~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~ 145 (267)
T 3p8z_A 67 LQWFVERN-MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKC 145 (267)
T ss_dssp HHHHHHTT-SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCC
T ss_pred HHHHHHhc-CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccc
Confidence 34444444 556788999999999999998877644458999998654321000 0 00000 01344679
Q ss_pred eEEEeCccccCCCCHH-------HHHHHHHHcccCCcEEEEEEeccC
Q 019861 233 DAVHAGAAIHCWSSPS-------TGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~-------~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
|.|+|.-.= --++|. .+|+-+.+.|++ |.+++-.....
T Consensus 146 DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 146 DTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp SEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred cEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 999997664 444542 356666788998 78888776653
No 308
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.93 E-value=0.011 Score=52.68 Aligned_cols=74 Identities=18% Similarity=0.112 Sum_probs=52.4
Q ss_pred CCCCCceEEEeCccccCCCCH----HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHH
Q 019861 227 FPKDSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 302 (334)
Q Consensus 227 ~~~~~fD~V~~~~vl~h~~d~----~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 302 (334)
+++..+|+|+... +---.+| ..+++.++++++|||++.- .. ....
T Consensus 182 l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt----------------------------aag~ 230 (308)
T 3vyw_A 182 VENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS----------------------------SSLS 230 (308)
T ss_dssp CCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC----------------------------CCHH
T ss_pred hcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee----------------------------CcHH
Confidence 3455799999864 2222355 4899999999999998764 22 2347
Q ss_pred HHHHHHhCCCcEEEEee-cCcEEEEEEEcC
Q 019861 303 IEDLCRACGLVDFKCTR-NRGFVMFTATKP 331 (334)
Q Consensus 303 l~~ll~~~Gf~~v~~~~-~g~~~~~~a~K~ 331 (334)
+++.|+++||+|.+..- ++..-|.+|.++
T Consensus 231 VRR~L~~aGF~V~k~~G~g~KReml~A~~~ 260 (308)
T 3vyw_A 231 VRKSLLTLGFKVGSSREIGRKRKGTVASLK 260 (308)
T ss_dssp HHHHHHHTTCEEEEEECC---CEEEEEESS
T ss_pred HHHHHHHCCCEEEecCCCCCCCceeEEecC
Confidence 88999999999887654 455678888775
No 309
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.32 E-value=0.031 Score=50.16 Aligned_cols=134 Identities=11% Similarity=0.013 Sum_probs=85.0
Q ss_pred CcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------C-------------CCCCCce
Q 019861 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------N-------------FPKDSID 233 (334)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~-------------~~~~~fD 233 (334)
..||++|||-=.....+.. .....++-+| .+..++..++.+.... . +....-=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCCCCE
Confidence 4799999998766555442 2235899999 5888888888775311 1 2223445
Q ss_pred EEEeCccccCCCC--HHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHH-HHhhhhc-------CccCC-CC-HH
Q 019861 234 AVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QNMMQIS-------GSYTF-LS-ER 301 (334)
Q Consensus 234 ~V~~~~vl~h~~d--~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~-~t-~~ 301 (334)
++++-.+|+++++ ...+|+.+.+.+.||+.+++.....+. .........+. ..+.... ....+ .+ .+
T Consensus 182 ~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~ 260 (310)
T 2uyo_A 182 AWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHG-DEWREQMQLRFRRVSDALGFEQAVDVQELIYHDENRA 260 (310)
T ss_dssp EEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTC-SHHHHHHHHHHHHHHC-----------CCTTCCTTCC
T ss_pred EEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCC-cchhHHHHHHHHHHHHHcCCcCCCCccccccCCCChH
Confidence 7778889999984 357899999988999998887765432 10111112122 2221111 12233 36 78
Q ss_pred HHHHHHHhCCCcEE
Q 019861 302 EIEDLCRACGLVDF 315 (334)
Q Consensus 302 ~l~~ll~~~Gf~~v 315 (334)
++.+.|.+.||+.+
T Consensus 261 ~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 261 VVADWLNRHGWRAT 274 (310)
T ss_dssp CHHHHHTTTTEEEE
T ss_pred HHHHHHHHCcCccc
Confidence 99999999999887
No 310
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.14 E-value=0.0073 Score=54.51 Aligned_cols=53 Identities=21% Similarity=0.218 Sum_probs=45.3
Q ss_pred HHHHHcccCCCCCCcEEEECCCcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHH
Q 019861 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCY 218 (334)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~ 218 (334)
.+.+.+.+...+++.+||..+|.|..+..+++. ++.++|+|+|.++.+++.++
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 345566677778999999999999999999887 56789999999999999884
No 311
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.03 E-value=0.011 Score=54.06 Aligned_cols=58 Identities=16% Similarity=0.064 Sum_probs=44.5
Q ss_pred HHHHHHHcccCCC------CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH
Q 019861 164 KEFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFV 221 (334)
Q Consensus 164 ~~~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~ 221 (334)
...+.|.+.+... ++..|||||.|.|.++..|.+.....+++++|+++..+...++.+
T Consensus 39 ~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp HHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT
T ss_pred HHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc
Confidence 3344555555433 357899999999999999998632248999999999998888765
No 312
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=95.60 E-value=0.0062 Score=38.83 Aligned_cols=33 Identities=18% Similarity=0.436 Sum_probs=24.3
Q ss_pred CceeCCCCCC-CccccCCCCcccccccCCcccccccccccccc
Q 019861 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 70 ~~l~CPiC~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
..+.||.|++ ++.... ..+.+.|..||.++...
T Consensus 4 ~~~~CP~C~~~~l~~d~---------~~gelvC~~CG~v~~e~ 37 (50)
T 1pft_A 4 KQKVCPACESAELIYDP---------ERGEIVCAKCGYVIEEN 37 (50)
T ss_dssp SCCSCTTTSCCCEEEET---------TTTEEEESSSCCBCCCC
T ss_pred ccEeCcCCCCcceEEcC---------CCCeEECcccCCccccc
Confidence 4578999999 554432 23679999999988654
No 313
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.53 E-value=0.0065 Score=53.50 Aligned_cols=95 Identities=11% Similarity=-0.006 Sum_probs=59.0
Q ss_pred CCCCCcEEEECC------CcCHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHHhcCC--CCCCCCceEEEeCcccc---
Q 019861 175 PVLGGNIIDASC------GSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQES--NFPKDSIDAVHAGAAIH--- 242 (334)
Q Consensus 175 ~~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~--~~~~~~fD~V~~~~vl~--- 242 (334)
-..+.+|||+|+ ..|.+ .+++.++. +.++++|+.+-... +...+..+. ....++||+|++...-.
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~sd-a~~~IqGD~~~~~~~~k~DLVISDMAPNtTG 183 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVSD-ADSTLIGDCATVHTANKWDLIISDMYDPRTK 183 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBCS-SSEEEESCGGGEEESSCEEEEEECCCCTTSC
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccccC-CCeEEEccccccccCCCCCEEEecCCCCcCC
Confidence 345789999996 67773 44455664 48999999773311 000011110 11247899999864321
Q ss_pred CC--CC------HHHHHHHHHHcccCCcEEEEEEeccC
Q 019861 243 CW--SS------PSTGVAEISRVLRPGGVFVGTTYIVD 272 (334)
Q Consensus 243 h~--~d------~~~~L~~i~r~LkpgG~lii~~~~~~ 272 (334)
+. .. -+.++.-+.++|+|||.+++-.+...
T Consensus 184 ~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 184 HVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp SSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred ccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 11 11 24677778999999999999877643
No 314
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.04 E-value=0.061 Score=49.77 Aligned_cols=96 Identities=16% Similarity=0.102 Sum_probs=66.4
Q ss_pred cCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-----CCC-C--------CCCCceEEEe
Q 019861 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-----ESN-F--------PKDSIDAVHA 237 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-----~~~-~--------~~~~fD~V~~ 237 (334)
.+..++.+||-+|+|. |.++..+++......|+++|.++..++.+++.-.. ... + ....+|+|+-
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 4556788999999876 77777777764223799999999998888753111 000 0 1236999997
Q ss_pred Cccc---------cCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 238 GAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 238 ~~vl---------~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.-.- .|.+++...++...+.|++||++++..
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 5432 133456667899999999999987754
No 315
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.88 E-value=0.068 Score=48.13 Aligned_cols=62 Identities=21% Similarity=0.339 Sum_probs=49.6
Q ss_pred CcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCH---HHHHHHHHHHhcCC
Q 019861 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQES 225 (334)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~---~~~~~a~~~~~~~~ 225 (334)
.|..+.+.+..... .++..|||.-||+|..+.+....+. +++|+|+++ ..++.+++++....
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 45677777766654 4588999999999999999999887 999999999 99999999886543
No 316
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.85 E-value=0.071 Score=48.82 Aligned_cols=93 Identities=16% Similarity=0.135 Sum_probs=63.3
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC-------CCCCCceEEE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN-------FPKDSIDAVH 236 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~-------~~~~~fD~V~ 236 (334)
+.....++.+||-+|+|. |.++..+++......|+++|.++..++.+++.-... .. ...+.+|+|+
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~vi 263 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFAL 263 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcEEE
Confidence 344556789999999876 777777776532236999999999988887542110 00 1123689887
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
-.-. . ...++...+.|+++|++++...
T Consensus 264 d~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 264 ESTG-----S-PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp ECSC-----C-HHHHHHHHHTEEEEEEEEECCC
T ss_pred ECCC-----C-HHHHHHHHHHHhcCCEEEEeCC
Confidence 5432 2 2458889999999999887543
No 317
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.76 E-value=0.055 Score=48.78 Aligned_cols=60 Identities=12% Similarity=0.040 Sum_probs=50.1
Q ss_pred CcHHHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc
Q 019861 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
.+..+.+.+.+... .++..|||.-||+|..+......+. +++|+|+++...+.+++++..
T Consensus 237 kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 237 FPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSC
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHh
Confidence 45566666666543 4588999999999999999999886 999999999999999988764
No 318
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.56 E-value=0.075 Score=49.59 Aligned_cols=49 Identities=10% Similarity=0.021 Sum_probs=41.3
Q ss_pred CCCCCcEEEECCCcCHHHHHHH-HcCC-CCeEEEEeCCHHHHHHHHHHHhc
Q 019861 175 PVLGGNIIDASCGSGLFSRIFA-KSGL-FSLVVALDYSENMLKQCYEFVQQ 223 (334)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~-~~~~-~~~v~giD~s~~~~~~a~~~~~~ 223 (334)
..++..++|||++.|.++..++ ..++ ..+|+++|+++...+..++++..
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 3578899999999999999887 4443 36999999999999999888765
No 319
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=94.49 E-value=1.2 Score=40.22 Aligned_cols=136 Identities=10% Similarity=0.088 Sum_probs=83.4
Q ss_pred CCcEEEECCCcCHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhc--------------------------CC-----
Q 019861 178 GGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQ--------------------------ES----- 225 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~--------------------------~~----- 225 (334)
...|+-+|||.=.....+...+ +...++=+|. ++.++.=++.+.. ..
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~ 169 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIG 169 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEc
Confidence 5689999999877777776542 3457777886 4444433322221 00
Q ss_pred ----------------CCCCCCceEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHH
Q 019861 226 ----------------NFPKDSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN 287 (334)
Q Consensus 226 ----------------~~~~~~fD~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~ 287 (334)
.++...-=++++-.+|.+++.. ..+|+.+.+.. |+|.+++.++... ..++.+.+...
T Consensus 170 ~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p----~d~fg~~M~~~ 244 (334)
T 3iei_A 170 ADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNM----GDRFGQIMIEN 244 (334)
T ss_dssp CCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCT----TSHHHHHHHHH
T ss_pred cccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCC----CCHHHHHHHHH
Confidence 1222344477777888888633 46788888766 4566666666532 22444444333
Q ss_pred hhh----hcCccCCCCHHHHHHHHHhCCCcEEEEee
Q 019861 288 MMQ----ISGSYTFLSEREIEDLCRACGLVDFKCTR 319 (334)
Q Consensus 288 ~~~----~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~ 319 (334)
+.. ..+...+.+.++..+.+.++||+.++...
T Consensus 245 l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d 280 (334)
T 3iei_A 245 LRRRQCDLAGVETCKSLESQKERLLSNGWETASAVD 280 (334)
T ss_dssp HHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEE
T ss_pred HHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeec
Confidence 322 12333567899999999999999876543
No 320
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.49 E-value=0.33 Score=44.40 Aligned_cols=92 Identities=16% Similarity=0.140 Sum_probs=63.6
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------C-------C---CCCCCceE
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------S-------N---FPKDSIDA 234 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~-------~---~~~~~fD~ 234 (334)
.....++.+||-+|+|. |.++..+++......|+++|.++...+.+++.-... . . ...+.+|+
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCCCCE
Confidence 34556688999999875 667777777642238999999999888887642110 0 0 22347999
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
|+-.- .. ...++...+.|++||++++...
T Consensus 257 vid~~-----G~-~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 257 VIECA-----GV-AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEECS-----CC-HHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECC-----CC-HHHHHHHHHHhccCCEEEEEec
Confidence 98643 22 2458889999999999888644
No 321
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=93.86 E-value=1.1 Score=40.39 Aligned_cols=119 Identities=14% Similarity=0.090 Sum_probs=76.1
Q ss_pred CCcEEEECCCcCHHHHHHHHcCC-CCeE-EEEeCCHHHHHHHHHHHhcCC---C---C-----CCCCceEEEeCccccCC
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGL-FSLV-VALDYSENMLKQCYEFVQQES---N---F-----PKDSIDAVHAGAAIHCW 244 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v-~giD~s~~~~~~a~~~~~~~~---~---~-----~~~~fD~V~~~~vl~h~ 244 (334)
..+++|+-||.|.+...+...|. ...+ .++|+++.+.+..+.++.... . + +...+|+++...--..+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEEVQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCCCBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCCcccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 45899999999999999999884 2356 799999999998888875431 1 1 12268999975332222
Q ss_pred -----------CCHH-HHHHHHHH-cccC---CcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHH
Q 019861 245 -----------SSPS-TGVAEISR-VLRP---GGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 308 (334)
Q Consensus 245 -----------~d~~-~~L~~i~r-~Lkp---gG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~ 308 (334)
.|+. ..+.++.+ +++. --.+++.+....- .. .-+.+.+.+.|+
T Consensus 90 s~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl----~~-----------------~~~~~~i~~~l~ 148 (327)
T 3qv2_A 90 NNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLF----KE-----------------SLVFKEIYNILI 148 (327)
T ss_dssp SHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGG----GG-----------------SHHHHHHHHHHH
T ss_pred ccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhh----cC-----------------hHHHHHHHHHHH
Confidence 3554 45555555 5432 1345554544310 00 013467888899
Q ss_pred hCCCcEEEE
Q 019861 309 ACGLVDFKC 317 (334)
Q Consensus 309 ~~Gf~~v~~ 317 (334)
+.|+.+...
T Consensus 149 ~~GY~v~~~ 157 (327)
T 3qv2_A 149 KNQYYIKDI 157 (327)
T ss_dssp HTTCEEEEE
T ss_pred hCCCEEEEE
Confidence 999987553
No 322
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.80 E-value=0.12 Score=42.50 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=57.8
Q ss_pred ccCCCCCCcEEEECC--CcCHHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHhcCC-----C----------CCCCCce
Q 019861 172 YLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQES-----N----------FPKDSID 233 (334)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~----------~~~~~fD 233 (334)
.....++.+||.+|+ |.|.....++. .|. +|+++|.+++..+.+++. .... . ...+.+|
T Consensus 33 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~~-g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 33 VGRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSRL-GVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHTT-CCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred HhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc-CCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 345566889999995 34555444444 464 899999998877766542 1100 0 1123589
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+|+.... ...++...+.|++||+++....
T Consensus 110 ~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 9986543 1457889999999999887543
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.79 E-value=0.23 Score=45.11 Aligned_cols=91 Identities=18% Similarity=0.162 Sum_probs=61.3
Q ss_pred cCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-CCC---------------CCCceEE
Q 019861 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFP---------------KDSIDAV 235 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~---------------~~~fD~V 235 (334)
.+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-.... ... .+.+|+|
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~v 246 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVT 246 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEE
Confidence 4556788999999875 7777777776422389999999988888875311100 000 1358888
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+-.- ..+ ..+....+.|++||+++....
T Consensus 247 id~~-----g~~-~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 247 IECT-----GAE-ASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EECS-----CCH-HHHHHHHHHSCTTCEEEECSC
T ss_pred EECC-----CCh-HHHHHHHHHhcCCCEEEEEec
Confidence 7543 222 357888999999999887543
No 324
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.37 E-value=0.24 Score=44.59 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=62.1
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------CC------CCCCceEEEeC
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NF------PKDSIDAVHAG 238 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~~------~~~~fD~V~~~ 238 (334)
.....++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++.-.... .+ ..+.+|+|+-.
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~ 239 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVT 239 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEES
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEe
Confidence 33556788999999975 77777777764 3499999999999888876321100 00 01257888754
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.. . ...++.+.+.|+++|++++..
T Consensus 240 ~g-----~-~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 240 AV-----S-PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SC-----C-HHHHHHHHHHEEEEEEEEECS
T ss_pred CC-----C-HHHHHHHHHHhccCCEEEEeC
Confidence 32 2 346888999999999988754
No 325
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.34 E-value=0.26 Score=44.21 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=59.2
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC--CC-------------CCCCc
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES--NF-------------PKDSI 232 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~--~~-------------~~~~f 232 (334)
+.....++.+||-.|+ |.|..+..++.. |. +|+++|.++..++.+++ +.... .. ..+.+
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~-~g~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEKIAYLKQ-IGFDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH-TTCSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh-cCCcEEEecCCHHHHHHHHHHHhCCCC
Confidence 3445567889999998 445555555543 54 99999999988887743 22110 00 11468
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
|+|+.+..- ..++...+.|++||++++..
T Consensus 216 d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVGG-------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSCH-------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh-------HHHHHHHHHHhcCCEEEEEe
Confidence 998876542 34788889999999988754
No 326
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=93.18 E-value=0.024 Score=40.13 Aligned_cols=32 Identities=25% Similarity=0.477 Sum_probs=23.7
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
..+.||.||..+.... ..+.|.|+.|+..+..
T Consensus 26 ~~y~Cp~CG~~~v~r~---------atGiW~C~~Cg~~~ag 57 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQ---------GTGIWQCSYCDYKFTG 57 (83)
T ss_dssp SCEECSSSCCEEEEEE---------ETTEEEETTTCCEEEC
T ss_pred ccCcCCCCCCcceecc---------CCCeEECCCCCCEecC
Confidence 3589999999654432 3378999999987643
No 327
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.17 E-value=0.15 Score=47.08 Aligned_cols=97 Identities=18% Similarity=0.111 Sum_probs=64.5
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-----CCCC---------CCCCceEEE
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-----ESNF---------PKDSIDAVH 236 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-----~~~~---------~~~~fD~V~ 236 (334)
..+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-.. ...+ ....+|+|+
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~Dvvi 259 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVDCGV 259 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCCEEE
Confidence 44566789999999976 77777777753223899999999988888753110 0111 112589998
Q ss_pred eCccccCC--------CCHHHHHHHHHHcccCCcEEEEEE
Q 019861 237 AGAAIHCW--------SSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 237 ~~~vl~h~--------~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
-.-.-... .++...+++..+.|++||++++.-
T Consensus 260 d~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 260 DAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp ECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred ECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 65432210 023356889999999999987643
No 328
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.71 E-value=0.21 Score=44.86 Aligned_cols=91 Identities=11% Similarity=-0.003 Sum_probs=61.7
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C-------CCCCCceE
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N-------FPKDSIDA 234 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~-------~~~~~fD~ 234 (334)
+.....++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+.+.+.... . ...+.+|+
T Consensus 143 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 143 DVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp HTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCceE
Confidence 4455667899999998 3466666666543 2499999999988888743332110 0 01246898
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
|+....- ..+....+.|+++|++++...
T Consensus 222 vi~~~g~-------~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 222 FFDNVGG-------EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCc-------chHHHHHHHHhhCCEEEEEee
Confidence 8865431 368889999999999887543
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.68 E-value=0.31 Score=44.16 Aligned_cols=92 Identities=15% Similarity=0.176 Sum_probs=63.3
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCceEE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSIDAV 235 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~fD~V 235 (334)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... .. .....+|+|
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v 239 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKV 239 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEE
Confidence 344566789999999875 677777777642237999999999888887642211 00 112369999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+-.-. .+ ..++...+.|++||+++..-
T Consensus 240 ~d~~g-----~~-~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 240 VIAGG-----DV-HTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp EECSS-----CT-THHHHHHHHEEEEEEEEECC
T ss_pred EECCC-----Ch-HHHHHHHHHHhcCCEEEEec
Confidence 86432 22 35788999999999988754
No 330
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=92.52 E-value=0.063 Score=35.23 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=22.6
Q ss_pred CceeCCCCCC-CccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
..+.||.|+. ++.... ..+.+.|..||.++..
T Consensus 10 ~~~~Cp~C~~~~lv~D~---------~~ge~vC~~CGlVl~e 42 (58)
T 1dl6_A 10 PRVTCPNHPDAILVEDY---------RAGDMICPECGLVVGD 42 (58)
T ss_dssp SCCSBTTBSSSCCEECS---------SSCCEECTTTCCEECC
T ss_pred ccccCcCCCCCceeEeC---------CCCeEEeCCCCCEEec
Confidence 4468999998 433322 3367999999998754
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.49 E-value=0.41 Score=43.57 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=63.3
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCceEE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSIDAV 235 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~fD~V 235 (334)
+.....++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++.-... .. .....+|+|
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~v 261 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI 261 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 445666789999999775 66666666653 349999999999888887642110 00 012369999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+-.-.- ..+....+.|+++|++++....
T Consensus 262 id~~g~-------~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 262 LEIAGG-------AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEETTS-------SCHHHHHHHEEEEEEEEEECCC
T ss_pred EECCCh-------HHHHHHHHHhhcCCEEEEEecC
Confidence 865431 2377788999999998886543
No 332
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=92.38 E-value=0.047 Score=34.63 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=21.3
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCcccccccccccc
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
.--||.||+...... ....++|+.||.++-
T Consensus 19 ~k~CP~CG~~~fm~~---------~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 19 NKFCPRCGPGVFMAD---------HGDRWACGKCGYTEW 48 (50)
T ss_dssp SEECSSSCSSCEEEE---------CSSEEECSSSCCEEE
T ss_pred cccCCCCCCceEEec---------CCCeEECCCCCCEEE
Confidence 355999999754432 226799999998763
No 333
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.25 E-value=0.29 Score=44.26 Aligned_cols=87 Identities=14% Similarity=0.135 Sum_probs=60.9
Q ss_pred CCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------CCCCCCceEEEeCccccCCCC
Q 019861 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NFPKDSIDAVHAGAAIHCWSS 246 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~~~~~~fD~V~~~~vl~h~~d 246 (334)
+..++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++. .... .+.. .+|+|+-.-.-.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~~v~~~~~~~~~-~~D~vid~~g~~---- 245 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM-GVKHFYTDPKQCKE-ELDFIISTIPTH---- 245 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT-TCSEEESSGGGCCS-CEEEEEECCCSC----
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc-CCCeecCCHHHHhc-CCCEEEECCCcH----
Confidence 556789999999875 67777777653 34999999999888888763 2111 1122 688888643322
Q ss_pred HHHHHHHHHHcccCCcEEEEEEe
Q 019861 247 PSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 247 ~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
..+....+.|+++|++++...
T Consensus 246 --~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 246 --YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp --CCHHHHHTTEEEEEEEEECCC
T ss_pred --HHHHHHHHHHhcCCEEEEECC
Confidence 137788899999999988643
No 334
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=92.14 E-value=0.24 Score=43.57 Aligned_cols=103 Identities=9% Similarity=0.005 Sum_probs=73.0
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC----------------C
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----------------F 227 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~----------------~ 227 (334)
..++.+.. + .+..+||+=+|+|.++..+...+ .+++.+|.++...+..++++..... -
T Consensus 82 ~yf~~l~~-~---n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~ 155 (283)
T 2oo3_A 82 EYISVIKQ-I---NLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLP 155 (283)
T ss_dssp HHHHHHHH-H---SSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCS
T ss_pred HHHHHHHH-h---cCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcC
Confidence 44555555 2 24679999999999999998855 4999999999999998887654220 1
Q ss_pred CCCCceEEEeCccccCCCCHHHHHHHHHH--cccCCcEEEEEEeccC
Q 019861 228 PKDSIDAVHAGAAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIVD 272 (334)
Q Consensus 228 ~~~~fD~V~~~~vl~h~~d~~~~L~~i~r--~LkpgG~lii~~~~~~ 272 (334)
+..+||+|++.=-.+.-.+...+++.+.+ .+.|+|++++-.|..+
T Consensus 156 ~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 156 PPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp CTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 23469999986544433345566666665 4568999998877754
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.12 E-value=0.57 Score=42.51 Aligned_cols=90 Identities=20% Similarity=0.184 Sum_probs=63.2
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHHHHhcCC-------------------CCCCC
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQES-------------------NFPKD 230 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~-v~giD~s~~~~~~a~~~~~~~~-------------------~~~~~ 230 (334)
..+..++.+||-+|+|. |.++..+++.. ..+ |+++|.++..++.+++. .... .....
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCC
Confidence 34556788999999875 67777777664 234 99999999999988876 3111 01134
Q ss_pred CceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 231 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 231 ~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
.+|+|+-.-. .+ ..+....+.|++||++++...
T Consensus 252 g~Dvvid~~g-----~~-~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 252 EPAVALECTG-----VE-SSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp CCSEEEECSC-----CH-HHHHHHHHHSCTTCEEEECCC
T ss_pred CCCEEEECCC-----Ch-HHHHHHHHHhcCCCEEEEEcc
Confidence 6888886432 22 357888999999999987644
No 336
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.10 E-value=0.48 Score=43.29 Aligned_cols=86 Identities=16% Similarity=0.151 Sum_probs=59.6
Q ss_pred CCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----------CCCCCCceEEEeCccc
Q 019861 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----------NFPKDSIDAVHAGAAI 241 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----------~~~~~~fD~V~~~~vl 241 (334)
+..++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++. .... ... +.+|+|+-.-.-
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l-Ga~~vi~~~~~~~~~~~~-~g~Dvvid~~g~ 267 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL-GADEVVNSRNADEMAAHL-KSFDFILNTVAA 267 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-TCSEEEETTCHHHHHTTT-TCEEEEEECCSS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCcEEeccccHHHHHHhh-cCCCEEEECCCC
Confidence 556788999999875 66676776653 34899999999888888753 2111 111 468998865432
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
. ..++...+.|+++|+++...
T Consensus 268 ~------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 268 P------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp C------CCHHHHHTTEEEEEEEEECC
T ss_pred H------HHHHHHHHHhccCCEEEEec
Confidence 1 13677889999999988743
No 337
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.73 E-value=0.96 Score=44.82 Aligned_cols=122 Identities=15% Similarity=0.119 Sum_probs=73.6
Q ss_pred CCcEEEECCCcCHHHHHHHHc------------CCCCeEEEEeC---CHHHHHHHHHH-----------HhcCC------
Q 019861 178 GGNIIDASCGSGLFSRIFAKS------------GLFSLVVALDY---SENMLKQCYEF-----------VQQES------ 225 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~------------~~~~~v~giD~---s~~~~~~a~~~-----------~~~~~------ 225 (334)
.-+|||+|-|+|.......+. ....+++++|. +.+.+..+-.. .....
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 459999999999765444332 11246899998 77666643321 11110
Q ss_pred ------------------------CCC---CCCceEEEeCccccCCCCH----HHHHHHHHHcccCCcEEEEEEeccCCC
Q 019861 226 ------------------------NFP---KDSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGP 274 (334)
Q Consensus 226 ------------------------~~~---~~~fD~V~~~~vl~h~~d~----~~~L~~i~r~LkpgG~lii~~~~~~~~ 274 (334)
.+. ...||+|+....-- -.+| ..+++.+.++++|||.+.. .
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-~~np~~w~~~~~~~l~~~~~~g~~~~t--~----- 218 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-AKNPDMWTQNLFNAMARLARPGGTLAT--F----- 218 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-GGCGGGSCHHHHHHHHHHEEEEEEEEE--S-----
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-cCChhhhhHHHHHHHHHHhCCCCEEEe--c-----
Confidence 011 35688887754211 1244 4678899999999887653 1
Q ss_pred CCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEeec-CcEEEEEEEc
Q 019861 275 FNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-RGFVMFTATK 330 (334)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~~~-g~~~~~~a~K 330 (334)
-....+++.|+++||.+.+.... +..-+..+.+
T Consensus 219 -----------------------~~~~~vr~~L~~aGf~v~~~~~~g~krem~~~~~ 252 (676)
T 3ps9_A 219 -----------------------TSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVM 252 (676)
T ss_dssp -----------------------CCCHHHHHHHHHHTCEEEEEECSTTCCEEEEEEC
T ss_pred -----------------------cCcHHHHHHHHhCCeEEEeccccccchhhhheec
Confidence 12247888899999987764433 2444555444
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.70 E-value=0.7 Score=42.11 Aligned_cols=92 Identities=15% Similarity=0.108 Sum_probs=61.2
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CCC-------CCCCceE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SNF-------PKDSIDA 234 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~-------~~~~fD~ 234 (334)
+..+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... ..+ ..+.+|+
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~ 265 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDF 265 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCE
Confidence 344556788999999865 666777776642237999999999888887531110 000 0135888
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCC-cEEEEEE
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 268 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~Lkpg-G~lii~~ 268 (334)
|+-.-. . ...++...+.|+++ |++++..
T Consensus 266 vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 266 SLECVG-----N-VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp EEECSC-----C-HHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC-----C-HHHHHHHHHHhhcCCcEEEEEc
Confidence 875432 2 24578899999999 9988754
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.57 E-value=0.27 Score=44.34 Aligned_cols=93 Identities=15% Similarity=0.133 Sum_probs=60.9
Q ss_pred HHcccCCCCCCcEEEECCC--cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCc
Q 019861 169 MKGYLKPVLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSI 232 (334)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~f 232 (334)
+.+.....++.+||-+|+| .|..+..+++.. ..+|+++|.++..++.+++.-... .. .....+
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 3344566778999999987 466666666542 239999999998888887632110 00 112469
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
|+|+....- + .+.+..+.|+++|+++..-.
T Consensus 215 Dvvid~~g~-----~--~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 215 DAAIDSIGG-----P--DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEEESSCH-----H--HHHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCC-----h--hHHHHHHHhcCCCEEEEEee
Confidence 999865432 2 23445589999999888654
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.57 E-value=0.7 Score=41.74 Aligned_cols=90 Identities=18% Similarity=0.131 Sum_probs=60.4
Q ss_pred cCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------CCC--------C---CCCce
Q 019861 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------SNF--------P---KDSID 233 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------~~~--------~---~~~fD 233 (334)
.+..++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++.-... ..+ . .+.+|
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D 242 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPN 242 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCC
Confidence 3556688999999875 66666666653 237999999999888887532110 110 0 13588
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+|+-.-. . ...++...+.|+++|+++....
T Consensus 243 ~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 243 VTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred EEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 8875432 2 2357888999999999887543
No 341
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.51 E-value=0.42 Score=43.00 Aligned_cols=90 Identities=12% Similarity=0.044 Sum_probs=60.7
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------CC-------CCCCce
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--------NF-------PKDSID 233 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------~~-------~~~~fD 233 (334)
+..+..++.+||-+|+ |.|..+..++... ..+|+++|.++..++.+++.+.... .+ ..+.+|
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEE
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCc
Confidence 3345567889999997 4566666666543 2499999999988888774322110 11 013589
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+|+.... . ..++...+.|++||++++..
T Consensus 228 ~vi~~~g-----~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 228 IYFENVG-----G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEESSC-----H--HHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCC-----H--HHHHHHHHHHhcCCEEEEEc
Confidence 8886643 1 36888999999999988754
No 342
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.39 E-value=0.74 Score=41.90 Aligned_cols=92 Identities=17% Similarity=0.127 Sum_probs=61.2
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CC-------CCCCCceE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SN-------FPKDSIDA 234 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~-------~~~~~fD~ 234 (334)
+..+..++.+||-+|+|. |.++..+++......|+++|.++..++.+++.-... .. ...+.+|+
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~ 263 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDY 263 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCE
Confidence 344556788999999865 666666666532237999999998888887532110 00 01136888
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCC-cEEEEEE
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 268 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~Lkpg-G~lii~~ 268 (334)
|+-.-. . ...++...+.|+++ |++++..
T Consensus 264 vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 264 SFECIG-----N-VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp EEECSC-----C-HHHHHHHHHTBCTTTCEEEECS
T ss_pred EEECCC-----c-HHHHHHHHHhhccCCcEEEEEe
Confidence 875432 2 24578899999999 9988754
No 343
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.34 E-value=0.81 Score=41.71 Aligned_cols=93 Identities=15% Similarity=0.087 Sum_probs=61.8
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CCC-------CCCCceE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SNF-------PKDSIDA 234 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~-------~~~~fD~ 234 (334)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... ..+ ..+.+|+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dv 268 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDY 268 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccE
Confidence 344566788999999874 667777777642237999999998888887531110 000 0135888
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCC-cEEEEEEe
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 269 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~Lkpg-G~lii~~~ 269 (334)
|+-.- .. ...++...+.|+++ |++++.-.
T Consensus 269 vid~~-----G~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 269 SLDCA-----GT-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp EEESS-----CC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEECC-----CC-HHHHHHHHHHhhcCCCEEEEECC
Confidence 87543 22 24578899999999 99887543
No 344
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=91.26 E-value=0.96 Score=41.74 Aligned_cols=91 Identities=16% Similarity=0.041 Sum_probs=60.3
Q ss_pred CCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCceEEEeC
Q 019861 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSIDAVHAG 238 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~fD~V~~~ 238 (334)
...++.+||=+|+|. |.++..+++......|+++|.++.-++.+++.-... .. .....+|+|+-.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 456788999999865 666777776642238999999999988887642111 00 112368888754
Q ss_pred ccccCCCCHHHHHHHHHHcc----cCCcEEEEEEe
Q 019861 239 AAIHCWSSPSTGVAEISRVL----RPGGVFVGTTY 269 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~L----kpgG~lii~~~ 269 (334)
...+...+..+.+.| +++|++++...
T Consensus 290 -----~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 290 -----TGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp -----SSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred -----CCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 345544555555566 99999888543
No 345
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.09 E-value=0.54 Score=42.00 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=62.5
Q ss_pred HcccCCCCCCcEEEECC--CcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCc
Q 019861 170 KGYLKPVLGGNIIDASC--GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSI 232 (334)
Q Consensus 170 ~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~f 232 (334)
.......++.+||-+|+ |.|..+..+++. |. +|+++|.++..++.+++.-... .. .....+
T Consensus 133 ~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 133 RQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCc
Confidence 34445667899999993 346666666654 54 9999999999888887532110 00 122469
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
|+|+....- ..+....+.|+++|++++....
T Consensus 211 Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 211 PVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp EEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred eEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 999875442 2477888999999998886543
No 346
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.07 E-value=0.7 Score=42.10 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=61.2
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CCC-------CCCCceE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SNF-------PKDSIDA 234 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~~-------~~~~fD~ 234 (334)
+..+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... ..+ ..+.+|+
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dv 264 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDY 264 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCE
Confidence 344556788999999875 666667766532237999999998888887531110 000 1136888
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCC-cEEEEEE
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 268 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~Lkpg-G~lii~~ 268 (334)
|+-.- .. ...++...+.|+++ |++++..
T Consensus 265 vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 265 AVECA-----GR-IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp EEECS-----CC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred EEECC-----CC-HHHHHHHHHHHhcCCCEEEEEc
Confidence 87543 22 24578899999999 9988754
No 347
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=91.02 E-value=0.87 Score=41.47 Aligned_cols=92 Identities=14% Similarity=0.096 Sum_probs=61.1
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CC-------CCCCCceE
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SN-------FPKDSIDA 234 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~-------~~~~~fD~ 234 (334)
+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... .. ...+.+|+
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~ 264 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDF 264 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSE
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcE
Confidence 344556788999999875 666777776642237999999998888886531110 00 01236888
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCC-cEEEEEE
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTT 268 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~Lkpg-G~lii~~ 268 (334)
|+-.- .. ...++...+.|+++ |++++.-
T Consensus 265 vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 265 SFEVI-----GR-LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp EEECS-----CC-HHHHHHHHHHBCTTTCEEEECS
T ss_pred EEECC-----CC-HHHHHHHHHHhhcCCcEEEEec
Confidence 87543 22 24578889999999 9988754
No 348
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.82 E-value=0.61 Score=41.97 Aligned_cols=90 Identities=13% Similarity=0.095 Sum_probs=61.4
Q ss_pred CCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----CCC--------CCCCceEEEeCc
Q 019861 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----SNF--------PKDSIDAVHAGA 239 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----~~~--------~~~~fD~V~~~~ 239 (334)
...++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... ..+ ....+|+|+-.-
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECC
Confidence 445688999999875 677777776532359999999999988887631110 000 112688887543
Q ss_pred cccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 240 AIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
..+ ..++...+.|+++|++++...
T Consensus 248 -----G~~-~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 248 -----GAQ-STIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp -----CCH-HHHHHHHHHEEEEEEEEECSC
T ss_pred -----CCH-HHHHHHHHHHhcCCEEEEECC
Confidence 222 368889999999999887643
No 349
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=90.81 E-value=1.4 Score=38.12 Aligned_cols=40 Identities=10% Similarity=0.087 Sum_probs=29.4
Q ss_pred CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 229 KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
..++|+|+...-. -......++.+...|+|||++++-+.+
T Consensus 180 ~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 180 QTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 4568998887632 123346789999999999999996654
No 350
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.81 E-value=0.96 Score=40.64 Aligned_cols=88 Identities=16% Similarity=0.105 Sum_probs=60.3
Q ss_pred cCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C--------CCCCCceEE
Q 019861 173 LKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N--------FPKDSIDAV 235 (334)
Q Consensus 173 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~--------~~~~~fD~V 235 (334)
.+..++.+||-+|+ |.|..+..+++.. ..+++++|.++..++.+++. .... . .....+|+|
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-ga~~~~d~~~~~~~~~~~~~~~~~~~d~v 239 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL-GADETVNYTHPDWPKEVRRLTGGKGADKV 239 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCSEEEETTSTTHHHHHHHHTTTTCEEEE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CCCEEEcCCcccHHHHHHHHhCCCCceEE
Confidence 35566889999998 4566666666543 24999999999888888653 2110 0 112369999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+.... . ..++.+.+.|+++|+++....
T Consensus 240 i~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 240 VDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred EECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 87654 2 237788899999999887543
No 351
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=90.75 E-value=0.17 Score=34.54 Aligned_cols=32 Identities=34% Similarity=0.620 Sum_probs=23.1
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
....||.|+..-.... ..++|.|..|+..+..
T Consensus 25 ~ky~C~fCgk~~vkR~---------a~GIW~C~~C~~~~AG 56 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKRG---------AAGIWTCSCCKKTVAG 56 (72)
T ss_dssp SCBCCSSCCSSCBSBC---------SSSCBCCSSSCCCCCC
T ss_pred cCccCCCCCCceeEec---------CCCeEECCCCCCEEeC
Confidence 4588999998643222 3479999999987643
No 352
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.52 E-value=1.2 Score=44.18 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=41.3
Q ss_pred CCceEEEeCccccCCCCH----HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHH
Q 019861 230 DSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 305 (334)
Q Consensus 230 ~~fD~V~~~~vl~h~~d~----~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ 305 (334)
..+|+++....--. .|| ..++..+.++++|||.+.. +-....+++
T Consensus 170 ~~~da~flD~f~p~-~np~~w~~~~~~~l~~~~~~g~~~~t------------------------------~~~~~~vr~ 218 (689)
T 3pvc_A 170 NQVDAWFLDGFAPA-KNPDMWNEQLFNAMARMTRPGGTFST------------------------------FTAAGFVRR 218 (689)
T ss_dssp TCEEEEEECSSCC---CCTTCSHHHHHHHHHHEEEEEEEEE------------------------------SCCCHHHHH
T ss_pred CceeEEEECCCCCC-CChhhhhHHHHHHHHHHhCCCCEEEe------------------------------ccCcHHHHH
Confidence 45777776442111 123 4677888888888876543 112347889
Q ss_pred HHHhCCCcEEEEeec-CcEEEEEEEc
Q 019861 306 LCRACGLVDFKCTRN-RGFVMFTATK 330 (334)
Q Consensus 306 ll~~~Gf~~v~~~~~-g~~~~~~a~K 330 (334)
.|.++||.+.+.... ...-+..+.+
T Consensus 219 ~l~~aGf~~~~~~~~~~k~~~~~~~~ 244 (689)
T 3pvc_A 219 GLQQAGFNVTKVKGFGQKREMLTGTL 244 (689)
T ss_dssp HHHHTTCEEEEEECSSSSCEEEEEEC
T ss_pred HHHhCCeEEEeccCCCcccccccccc
Confidence 999999987764432 2334444443
No 353
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.48 E-value=1 Score=40.87 Aligned_cols=84 Identities=15% Similarity=0.126 Sum_probs=59.3
Q ss_pred CCCcEEEEC-CC-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEEEeCccc
Q 019861 177 LGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAVHAGAAI 241 (334)
Q Consensus 177 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V~~~~vl 241 (334)
++.+||-+| +| .|.++..+++.....+|+++|.++..++.+++. ..+. ....+.+|+|+-.-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-Gad~vi~~~~~~~~~v~~~~~~g~Dvvid~~g- 248 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-GAHHVIDHSKPLAAEVAALGLGAPAFVFSTTH- 248 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-TCSEEECTTSCHHHHHHTTCSCCEEEEEECSC-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-CCCEEEeCCCCHHHHHHHhcCCCceEEEECCC-
Confidence 578999998 44 377888888751135999999999888888753 2110 122346888876432
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
-...+..+.+.|+++|++++.
T Consensus 249 -----~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 249 -----TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -----HHHHHHHHHHHSCTTCEEEEC
T ss_pred -----chhhHHHHHHHhcCCCEEEEE
Confidence 234678899999999999876
No 354
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.37 E-value=0.67 Score=41.49 Aligned_cols=90 Identities=19% Similarity=0.182 Sum_probs=61.2
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C--------CCCCCce
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N--------FPKDSID 233 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~--------~~~~~fD 233 (334)
+.....++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+++. .... . .....+|
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY-GAEYLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCcEEEeCCCchHHHHHHHHhCCCCce
Confidence 3345667899999994 3466666666553 34999999999888877653 2110 0 1134699
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+|+....- ..++...+.|+++|+++..-.
T Consensus 220 ~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 220 ASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 99876542 347788899999999888543
No 355
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=90.17 E-value=0.1 Score=37.47 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=22.7
Q ss_pred cCCCceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 67 ~~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
+..+...||.|+.++.+.+ ++..|..|+.-|..
T Consensus 28 ~~~M~~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f~~ 60 (101)
T 2jne_A 28 GSHMELHCPQCQHVLDQDN-----------GHARCRSCGEFIEM 60 (101)
T ss_dssp ---CCCBCSSSCSBEEEET-----------TEEEETTTCCEEEE
T ss_pred cccccccCccCCCcceecC-----------CEEECccccchhhc
Confidence 3445689999999998865 46667777765543
No 356
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.86 E-value=0.84 Score=41.67 Aligned_cols=94 Identities=17% Similarity=0.114 Sum_probs=63.0
Q ss_pred HcccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------CC-------CCCCCce
Q 019861 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------SN-------FPKDSID 233 (334)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------~~-------~~~~~fD 233 (334)
.+.....++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++.-... .. ..++.+|
T Consensus 186 ~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D 265 (378)
T 3uko_A 186 WNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVD 265 (378)
T ss_dssp HTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCC
Confidence 3445566789999999874 667777766532237999999999888887531110 00 1123688
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCC-cEEEEEEe
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~Lkpg-G~lii~~~ 269 (334)
+|+-.- ..+ ..++...+.|++| |++++.-.
T Consensus 266 ~vid~~-----g~~-~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 266 YSFECI-----GNV-SVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EEEECS-----CCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred EEEECC-----CCH-HHHHHHHHHhhccCCEEEEEcc
Confidence 888543 233 4578899999997 99887544
No 357
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.47 E-value=0.81 Score=41.85 Aligned_cols=89 Identities=22% Similarity=0.270 Sum_probs=59.9
Q ss_pred cC-CCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC----C--------------CCCCCc
Q 019861 173 LK-PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----N--------------FPKDSI 232 (334)
Q Consensus 173 l~-~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~----~--------------~~~~~f 232 (334)
.+ ..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. .... . .....+
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-Ga~~vi~~~~~~~~~~~~~v~~~~~g~g~ 268 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-GADLTLNRRETSVEERRKAIMDITHGRGA 268 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-TCSEEEETTTSCHHHHHHHHHHHTTTSCE
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-CCcEEEeccccCcchHHHHHHHHhCCCCC
Confidence 45 56788999999664 66666666653114999999999888888742 1110 0 112368
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
|+|+-.-. .+ ..++...+.|+++|+++..-
T Consensus 269 Dvvid~~g-----~~-~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 269 DFILEATG-----DS-RALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp EEEEECSS-----CT-THHHHHHHHEEEEEEEEECC
T ss_pred cEEEECCC-----CH-HHHHHHHHHHhcCCEEEEEe
Confidence 99886532 11 24778889999999988754
No 358
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.31 E-value=0.9 Score=41.09 Aligned_cols=89 Identities=17% Similarity=0.099 Sum_probs=58.7
Q ss_pred ccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCceEE
Q 019861 172 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSIDAV 235 (334)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~fD~V 235 (334)
..+..++.+||-.|+ |.|..+..++... ..+|+++|.++..++.+++.-... .. .....+|+|
T Consensus 165 ~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D~v 243 (351)
T 1yb5_A 165 SACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDII 243 (351)
T ss_dssp TSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred hhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcEEE
Confidence 445567889999997 3455555555542 248999999998887765421100 00 012368999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+....- ..+....+.|+++|++++..
T Consensus 244 i~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 244 IEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred EECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 876542 35778889999999988754
No 359
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=89.28 E-value=1.3 Score=39.81 Aligned_cols=87 Identities=23% Similarity=0.186 Sum_probs=58.9
Q ss_pred CCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--CCCC-----------CCceEEEeCc
Q 019861 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--NFPK-----------DSIDAVHAGA 239 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--~~~~-----------~~fD~V~~~~ 239 (334)
...++.+||-+|+|. |..+..+++.. ..+|+++|.++..++.+++. .... ...+ +.+|+|+...
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-Ga~~~~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL-GADLVVNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-TCSEEECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC-CCCEEecCCCccHHHHHHHHhCCCCEEEECC
Confidence 455688999999864 66666666553 24999999999988887652 2111 1110 3588887654
Q ss_pred cccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 240 AIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
. . ...++...+.|+++|+++...
T Consensus 239 g-----~-~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 239 V-----S-KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp C-----C-HHHHHHHHHHEEEEEEEEECC
T ss_pred C-----C-HHHHHHHHHHhhcCCEEEEec
Confidence 2 2 245788899999999988753
No 360
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=89.22 E-value=0.96 Score=40.70 Aligned_cols=90 Identities=13% Similarity=0.019 Sum_probs=60.8
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----CC--------CCCCCceEE
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----SN--------FPKDSIDAV 235 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----~~--------~~~~~fD~V 235 (334)
+.....++.+||-+|+ |.|..+..+++.. ..+|++++.++..++.+++.-... .. .....+|+|
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHHTCSEEEESSTTHHHHHHHHTTTSCEEEE
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEecCchhHHHHHHHHhCCCCceEE
Confidence 4455667899999997 3466666666653 349999999998888877642110 00 112369999
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+-...-. .+....+.|+++|++++..
T Consensus 232 id~~g~~-------~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 232 VDPIGGP-------AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred EECCchh-------HHHHHHHhhcCCCEEEEEE
Confidence 8764422 4778889999999988754
No 361
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.22 E-value=0.83 Score=40.69 Aligned_cols=88 Identities=11% Similarity=0.069 Sum_probs=59.3
Q ss_pred ccCCCCCCcEEEECC--CcCHHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C--------CCCCCce
Q 019861 172 YLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQES-------N--------FPKDSID 233 (334)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~--------~~~~~fD 233 (334)
..+..++.+||-.|+ |.|.....++. .|. +|+++|.++..++.+++. .... . .....+|
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA-GAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH-TCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc-CCCEEEECCCccHHHHHHHHhCCCCce
Confidence 445567889999994 44555555544 454 999999999888877753 2110 0 1123689
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+|+.... ...++.+.+.|+++|+++....
T Consensus 212 ~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 212 VVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 9987654 2347888999999999887543
No 362
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.13 E-value=0.77 Score=41.38 Aligned_cols=88 Identities=18% Similarity=0.172 Sum_probs=58.5
Q ss_pred CCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--CCC-------------CCCceEEE
Q 019861 174 KPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--NFP-------------KDSIDAVH 236 (334)
Q Consensus 174 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--~~~-------------~~~fD~V~ 236 (334)
...++.+||-+|+ |.|..+..++... ..+|+++|.++..++.+++. .... ... ++.+|+|+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~-g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI-GGEVFIDFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT-TCCEEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc-CCceEEecCccHhHHHHHHHHhCCCCCEEE
Confidence 4566889999998 3566665555542 23999999998877777652 1110 000 12588888
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
.... . ...++.+.+.|+++|+++....
T Consensus 244 ~~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 244 NVSV-----S-EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp ECSS-----C-HHHHHHHTTSEEEEEEEEECCC
T ss_pred ECCC-----c-HHHHHHHHHHHhcCCEEEEEeC
Confidence 6643 1 2468889999999999887543
No 363
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.04 E-value=2 Score=38.57 Aligned_cols=84 Identities=12% Similarity=0.114 Sum_probs=56.9
Q ss_pred CCCcEEEEC-CC-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----CC-------CCCCCceEEEeCcccc
Q 019861 177 LGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----SN-------FPKDSIDAVHAGAAIH 242 (334)
Q Consensus 177 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----~~-------~~~~~fD~V~~~~vl~ 242 (334)
++.+||-+| +| .|.++..+++.. ..+|+++|.++..++.+++.-... .. ...+.+|+|+-...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv~d~~g-- 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYVFCTFN-- 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEEEESSC--
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEEEECCC--
Confidence 688999994 44 366666666653 349999999999888887632110 00 11246898886432
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
-...+..+.+.|+++|+++..
T Consensus 227 ----~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 227 ----TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp ----HHHHHHHHHHHEEEEEEEEES
T ss_pred ----chHHHHHHHHHhccCCEEEEE
Confidence 234578889999999998764
No 364
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.90 E-value=1.2 Score=40.33 Aligned_cols=90 Identities=9% Similarity=-0.007 Sum_probs=59.5
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C--------CCCCCce
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N--------FPKDSID 233 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~--------~~~~~fD 233 (334)
+..+..++.+||-+|+ |.|..+..++... ..+|+++|.++..++.+++. .... . .....+|
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL-GAAAGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-TCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc-CCcEEEecCChHHHHHHHHHhcCCCce
Confidence 3345567889999984 3465555555542 24999999999888887543 2110 0 1124689
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+|+....- + .+....+.|+++|++++...
T Consensus 234 ~vi~~~G~-----~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 234 LILDCIGG-----S--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEESSCG-----G--GHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCc-----h--HHHHHHHhccCCCEEEEEec
Confidence 98876542 2 46778899999999887543
No 365
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.86 E-value=0.63 Score=41.31 Aligned_cols=87 Identities=9% Similarity=0.028 Sum_probs=57.0
Q ss_pred cccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-----CCCCCCCceEEEeCccccCC
Q 019861 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-----SNFPKDSIDAVHAGAAIHCW 244 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-----~~~~~~~fD~V~~~~vl~h~ 244 (334)
+..+..++.+||-+|+|. |.++..+++.. ..+|++++ ++...+.+++.-... ..+ .+.+|+|+-.-.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa~~v~~d~~~v-~~g~Dvv~d~~g---- 208 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGVRHLYREPSQV-TQKYFAIFDAVN---- 208 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTEEEEESSGGGC-CSCEEEEECC------
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCCCEEEcCHHHh-CCCccEEEECCC----
Confidence 455667789999999964 66777776653 23999999 988888887642110 011 456888875432
Q ss_pred CCHHHHHHHHHHcccCCcEEEEE
Q 019861 245 SSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 245 ~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
.+ .+....+.|+++|+++..
T Consensus 209 -~~--~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 209 -SQ--NAAALVPSLKANGHIICI 228 (315)
T ss_dssp --------TTGGGEEEEEEEEEE
T ss_pred -ch--hHHHHHHHhcCCCEEEEE
Confidence 22 235678899999998876
No 366
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=88.83 E-value=0.045 Score=37.80 Aligned_cols=39 Identities=31% Similarity=0.786 Sum_probs=22.7
Q ss_pred CceeCCCCCCCccccC--CCCcccc--------------cccCCccccccccccc
Q 019861 70 NVLACPICYKPLTWIG--DSSLSIE--------------SAAGSSLQCNTCKKTY 108 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~--~~~~~~~--------------~~~~~~~~C~~C~~~~ 108 (334)
.+-.||+||.++.+.. .+.+... ....-.+.||.||-.+
T Consensus 7 ~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP~CgEEF 61 (95)
T 2k5c_A 7 HMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCPVCGEEF 61 (95)
T ss_dssp -CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECTTTCCEE
T ss_pred ccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCCCccHHH
Confidence 4568999999885531 0011110 1133478999999765
No 367
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.78 E-value=1.7 Score=39.08 Aligned_cols=90 Identities=12% Similarity=0.085 Sum_probs=60.7
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCceEE
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQE------SN--------FPKDSIDAV 235 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~fD~V 235 (334)
..+. ++.+||-+|+|. |..+..+++.. .. +|+++|.++..++.+++.-... .. .....+|+|
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~v 240 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVF 240 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEE
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEE
Confidence 3455 788999999964 66666666654 34 8999999998888887532110 00 012358998
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+..-. . ...++.+.+.|+++|+++....
T Consensus 241 id~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 241 LEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 86543 2 2457888999999999887543
No 368
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.35 E-value=1.4 Score=39.88 Aligned_cols=88 Identities=13% Similarity=0.092 Sum_probs=60.4
Q ss_pred cCCCCCCcEEEEC--CCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C-------CCCCCceEEE
Q 019861 173 LKPVLGGNIIDAS--CGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N-------FPKDSIDAVH 236 (334)
Q Consensus 173 l~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~-------~~~~~fD~V~ 236 (334)
....++.+||-+| .|.|..+..+++.. ..+|+++|.+++.++.+++. .... . ...+.+|+|+
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~-Ga~~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL-GCDRPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCSEEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc-CCcEEEecCChhHHHHHHHhcCCCCCEEE
Confidence 3456688999999 34577776666653 34899999998888877752 2110 0 0124589988
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
.... . ..++.+.+.|+++|+++....
T Consensus 237 d~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 237 ESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp ECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 6543 2 468889999999999887544
No 369
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=88.22 E-value=0.74 Score=41.40 Aligned_cols=88 Identities=13% Similarity=0.120 Sum_probs=59.2
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHHHhcCC-CCC------------CCCceEEE
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQES-NFP------------KDSIDAVH 236 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~giD~s~~~~~~a~~~~~~~~-~~~------------~~~fD~V~ 236 (334)
..+. ++.+||-+|+|. |.++..+++.. .. +|+++|.++..++.+++. .... ... .+.+|+|+
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~~~~~~~~~~~~~~g~D~vi 236 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-ADRLVNPLEEDLLEVVRRVTGSGVEVLL 236 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CSEEECTTTSCHHHHHHHHHSSCEEEEE
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HHhccCcCccCHHHHHHHhcCCCCCEEE
Confidence 4455 788999999854 66666666654 34 799999998877777653 2110 000 23588887
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
-.-. . ...++...+.|+++|+++...
T Consensus 237 d~~g-----~-~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 237 EFSG-----N-EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp ECSC-----C-HHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-----C-HHHHHHHHHHHhcCCEEEEEe
Confidence 5532 2 245788899999999988754
No 370
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=88.22 E-value=0.66 Score=41.74 Aligned_cols=86 Identities=9% Similarity=0.062 Sum_probs=58.4
Q ss_pred CCCcEEEECCCc-CHHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHHhcCCC------------CC-CCCceEEEeCccc
Q 019861 177 LGGNIIDASCGS-GLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESN------------FP-KDSIDAVHAGAAI 241 (334)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~giD~s~~~~~~a~~~~~~~~~------------~~-~~~fD~V~~~~vl 241 (334)
++.+||-+|+|. |.++..+++.. +..+|+++|.++..++.+++. ..... +. ...+|+|+-.-.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-Ga~~vi~~~~~~~~~~~~~~g~g~D~vid~~g- 247 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-GADYVSEMKDAESLINKLTDGLGASIAIDLVG- 247 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-TCSEEECHHHHHHHHHHHHTTCCEEEEEESSC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-CCCEEeccccchHHHHHhhcCCCccEEEECCC-
Confidence 688999999964 56666666542 134899999999888887753 11100 01 226899886543
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
. ...++...+.|+++|+++....
T Consensus 248 ----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 248 ----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp ----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred ----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 2 2357889999999999887543
No 371
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=88.17 E-value=0.17 Score=35.47 Aligned_cols=32 Identities=25% Similarity=0.585 Sum_probs=23.1
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
....||.|+..-.... ..++|.|..|+..+..
T Consensus 34 ~ky~CpfCGk~~vkR~---------a~GIW~C~kCg~~~AG 65 (83)
T 3j21_i 34 QKHTCPVCGRKAVKRI---------STGIWQCQKCGATFAG 65 (83)
T ss_dssp SCBCCSSSCSSCEEEE---------ETTEEEETTTCCEEEC
T ss_pred cccCCCCCCCceeEec---------CcCeEEcCCCCCEEeC
Confidence 3588999999643221 3479999999987643
No 372
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=88.13 E-value=0.15 Score=33.16 Aligned_cols=40 Identities=15% Similarity=0.424 Sum_probs=22.9
Q ss_pred ceeCCCCCCCccccCCCCc-ccccccCCccccccccccccc
Q 019861 71 VLACPICYKPLTWIGDSSL-SIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~-~~~~~~~~~~~C~~C~~~~~~ 110 (334)
...||-||........... +.......++.|.+|++.+..
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~~ 55 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWRS 55 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEEC
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEecc
Confidence 5789999995422111001 111123357999999987643
No 373
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.08 E-value=0.61 Score=42.30 Aligned_cols=88 Identities=16% Similarity=0.097 Sum_probs=56.2
Q ss_pred CCC-CCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCCC--C--------CCCceEEEeCccc
Q 019861 174 KPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF--P--------KDSIDAVHAGAAI 241 (334)
Q Consensus 174 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~--------~~~fD~V~~~~vl 241 (334)
... ++.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++.+..+.-+ . .+.+|+|+-.-.-
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCC
Confidence 344 688999999764 55566665542 248999999988777776333221100 0 1358988865432
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
. ..++...+.|+++|+++...
T Consensus 255 ~------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 255 H------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp C------CCSHHHHTTEEEEEEEEECS
T ss_pred h------HHHHHHHHHhccCCEEEEeC
Confidence 1 12566778999999988754
No 374
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=88.06 E-value=0.22 Score=34.84 Aligned_cols=27 Identities=37% Similarity=0.992 Sum_probs=17.3
Q ss_pred eeCCCCCCCccccCCCCcccccccCCcccccccccccc
Q 019861 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 72 l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
..||.|+.++.+.+ .+..|..|+.-|.
T Consensus 3 ~~CP~C~~~l~~~~-----------~~~~C~~C~~~~~ 29 (81)
T 2jrp_A 3 ITCPVCHHALERNG-----------DTAHCETCAKDFS 29 (81)
T ss_dssp CCCSSSCSCCEECS-----------SEEECTTTCCEEE
T ss_pred CCCCCCCCccccCC-----------CceECccccccCC
Confidence 57888888877654 3455666655443
No 375
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=88.03 E-value=0.74 Score=41.47 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=58.8
Q ss_pred cCCCCCCcEEEECCCc--CHHHHHHHH-c-CCCCeEEEEeCCHHHHHHHHHHHhcCC-------C-------CCC-CCce
Q 019861 173 LKPVLGGNIIDASCGS--GLFSRIFAK-S-GLFSLVVALDYSENMLKQCYEFVQQES-------N-------FPK-DSID 233 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~--G~~~~~l~~-~-~~~~~v~giD~s~~~~~~a~~~~~~~~-------~-------~~~-~~fD 233 (334)
.+..++.+||-+|+|. |..+..++. . |. +|+++|.++..++.+++. .... . ... +.+|
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d 242 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKRA-GADYVINASMQDPLAEIRRITESKGVD 242 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHH-TCSEEEETTTSCHHHHHHHHTTTSCEE
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHh-CCCEEecCCCccHHHHHHHHhcCCCce
Confidence 4456688999999984 455444444 3 54 899999999888887653 2110 0 111 4789
Q ss_pred EEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 234 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 234 ~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+|+.... . ...++...+.|+++|+++...
T Consensus 243 ~vi~~~g-----~-~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 243 AVIDLNN-----S-EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp EEEESCC-----C-HHHHTTGGGGEEEEEEEEECC
T ss_pred EEEECCC-----C-HHHHHHHHHHHhcCCEEEEEC
Confidence 8886543 1 235788889999999988754
No 376
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.94 E-value=1.2 Score=40.27 Aligned_cols=90 Identities=7% Similarity=-0.059 Sum_probs=59.8
Q ss_pred ccCCCCC--CcEEEECC--CcCHHHHHHHHcCCCC-eEEEEeCCHHHHHHHHHHHhcCC-------C-------CCCCCc
Q 019861 172 YLKPVLG--GNIIDASC--GSGLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQES-------N-------FPKDSI 232 (334)
Q Consensus 172 ~l~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~~-~v~giD~s~~~~~~a~~~~~~~~-------~-------~~~~~f 232 (334)
..+..++ .+||-.|+ |.|.....++... .. +|+++|.++..++.+++.+.... . ...+.+
T Consensus 153 ~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 231 (357)
T 2zb4_A 153 KGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGV 231 (357)
T ss_dssp HSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred hcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHhcCCCC
Confidence 3455567 89999998 3455555555543 34 89999999887777765332110 0 001258
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
|+|+.... ...++...+.|+++|++++...
T Consensus 232 d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 232 DVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 98887654 2568889999999999887543
No 377
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=87.67 E-value=0.2 Score=35.85 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=22.9
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
....||.|+..-.... ..++|.|..|+..+..
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~Cg~~~AG 66 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKRK---------AVGIWGCKDCGKVKAG 66 (92)
T ss_dssp SCBCCTTTCSSCBEEE---------ETTEEECSSSCCEEEC
T ss_pred ccccCcccCCCeeEec---------CcceEEcCCCCCEEeC
Confidence 3578999999643221 3479999999987643
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.57 E-value=1.8 Score=38.67 Aligned_cols=89 Identities=15% Similarity=0.115 Sum_probs=59.5
Q ss_pred ccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------C--------CCCCCceE
Q 019861 172 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------N--------FPKDSIDA 234 (334)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~--------~~~~~fD~ 234 (334)
..+..++.+||-.|+ |.|..+..++... ..+++++|.++..++.+++. .... . .....+|+
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-g~~~~~d~~~~~~~~~i~~~~~~~~~d~ 217 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL-GCHHTINYSTQDFAEVVREITGGKGVDV 217 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-TCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCCEEEECCCHHHHHHHHHHhCCCCCeE
Confidence 345567889999995 4566655555542 24999999999888877653 2110 0 01235899
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
|+....- ..++...+.|+++|+++....
T Consensus 218 vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 218 VYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred EEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 9866532 347888999999999887543
No 379
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=87.44 E-value=0.17 Score=37.75 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=23.0
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
.....||.||....... ..++|+|..|+..+..
T Consensus 58 ~akytCPfCGk~~vKR~---------avGIW~C~~Cgk~fAG 90 (116)
T 3cc2_Z 58 NEDHACPNCGEDRVDRQ---------GTGIWQCSYCDYKFTG 90 (116)
T ss_dssp HSCEECSSSCCEEEEEE---------ETTEEEETTTCCEEEC
T ss_pred ccCCcCCCCCCceeEec---------CceeEECCCCCCEEEC
Confidence 34589999998432221 2379999999987743
No 380
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=87.34 E-value=1.4 Score=39.67 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=60.9
Q ss_pred cccCCCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-CC------------CCCCceEE
Q 019861 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NF------------PKDSIDAV 235 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~------------~~~~fD~V 235 (334)
+.....++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+++.-.... .. ..+.+|+|
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dvv 239 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDII 239 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEEE
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceEE
Confidence 4455667889999953 3466666666653 3499999999998888876321100 00 02468998
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+....-. .+....+.|+++|++++...
T Consensus 240 id~~g~~-------~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 240 LDMIGAA-------YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EESCCGG-------GHHHHHHTEEEEEEEEECCC
T ss_pred EECCCHH-------HHHHHHHHhccCCEEEEEEe
Confidence 8765422 47788899999999887543
No 381
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=87.25 E-value=1 Score=39.68 Aligned_cols=56 Identities=25% Similarity=0.307 Sum_probs=33.2
Q ss_pred HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEE
Q 019861 248 STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 316 (334)
Q Consensus 248 ~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~ 316 (334)
..+++++.++|+|||.+++.......... .. ..+..+.-...+..++++.||....
T Consensus 77 ~~~~~~~~rvLk~~G~l~i~~~d~~~~~~--~~-----------g~~~~~~~~~~l~~~~~~~Gf~~~~ 132 (297)
T 2zig_A 77 DRVWREVFRLLVPGGRLVIVVGDVAVARR--RF-----------GRHLVFPLHADIQVRCRKLGFDNLN 132 (297)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECCEEEECC-----------------EEEECHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEECCCccccc--cC-----------CcccccccHHHHHHHHHHcCCeeec
Confidence 35678999999999999887653210000 00 0010111135677888899997655
No 382
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.02 E-value=1.8 Score=38.81 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=57.7
Q ss_pred CCCCCCcEEEECCCcC-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------C--------CCCCCceEEEeC
Q 019861 174 KPVLGGNIIDASCGSG-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------N--------FPKDSIDAVHAG 238 (334)
Q Consensus 174 ~~~~~~~vLDiGcG~G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~--------~~~~~fD~V~~~ 238 (334)
...++.+||=+|+|.+ .++..+++.....+|+++|.+++-++.+++.-.... . .....+|.++..
T Consensus 160 ~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~ 239 (348)
T 4eez_A 160 GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVC 239 (348)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEEC
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEe
Confidence 4567889999999874 444444443324699999999988887775422110 0 112346666544
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.. . ...+....+.|+++|.+++..
T Consensus 240 ~~-----~-~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 240 AV-----A-RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CS-----C-HHHHHHHHHTEEEEEEEEECC
T ss_pred cc-----C-cchhheeheeecCCceEEEEe
Confidence 32 2 345788899999999988754
No 383
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=86.96 E-value=0.23 Score=35.54 Aligned_cols=32 Identities=34% Similarity=0.620 Sum_probs=22.8
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
....||.|+..-.... ..++|.|..|+..+..
T Consensus 35 ~ky~CpfCgk~~vkR~---------a~GIW~C~~C~~~~AG 66 (92)
T 3izc_m 35 ARYDCSFCGKKTVKRG---------AAGIWTCSCCKKTVAG 66 (92)
T ss_dssp SCCCCSSSCSSCCEEE---------ETTEEECTTTCCEEEC
T ss_pred cCCcCCCCCCceeeec---------ccceEEcCCCCCEEeC
Confidence 3578999998633221 3479999999987633
No 384
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=86.81 E-value=4.4 Score=36.97 Aligned_cols=101 Identities=10% Similarity=-0.004 Sum_probs=63.3
Q ss_pred HHHcccCC-CCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------------CCCCCCceE
Q 019861 168 LMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------------NFPKDSIDA 234 (334)
Q Consensus 168 ~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------------~~~~~~fD~ 234 (334)
.+++.+.. ..+.+||.|+.+.|.++..++... ++.+.-|--.....+.++.... .-..+.+|+
T Consensus 28 ~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (375)
T 4dcm_A 28 YLLQQLDDTEIRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGIDESSVKFLDSTADYPQQPGV 103 (375)
T ss_dssp HHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETTSCCCSSCSE
T ss_pred HHHHhhhhccCCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCCCccceEecccccccccCCCE
Confidence 44444432 245789999999999998887653 3444335444444444443321 122457898
Q ss_pred EEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCC
Q 019861 235 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDG 273 (334)
Q Consensus 235 V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~ 273 (334)
|+...- .+.......|..+...|++|+.+++...+...
T Consensus 104 v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~~ 141 (375)
T 4dcm_A 104 VLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKARDI 141 (375)
T ss_dssp EEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGGC
T ss_pred EEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEecccch
Confidence 887432 22223346788899999999999887776543
No 385
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=86.30 E-value=2.5 Score=38.89 Aligned_cols=67 Identities=9% Similarity=0.045 Sum_probs=44.9
Q ss_pred CCcEEEECCCcCHHHHHHHHc-------CCCCeEEEEeCCHHHHHHHHHHHhcCC---------CCCCCCceEEEeCccc
Q 019861 178 GGNIIDASCGSGLFSRIFAKS-------GLFSLVVALDYSENMLKQCYEFVQQES---------NFPKDSIDAVHAGAAI 241 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~giD~s~~~~~~a~~~~~~~~---------~~~~~~fD~V~~~~vl 241 (334)
.-.|+|+|.|.|.++..+.+. ....+|+.||+|+...+.-++.+.... .++++ .-+|+++.+|
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~v~W~~~l~~lp~~-~~~viANE~f 159 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIRNIHWHDSFEDVPEG-PAVILANEYF 159 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCSSEEEESSGGGSCCS-SEEEEEESSG
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCCCeEEeCChhhcCCC-CeEEEecccc
Confidence 457999999999997766543 123489999999988877666654321 12322 4566677666
Q ss_pred cCCC
Q 019861 242 HCWS 245 (334)
Q Consensus 242 ~h~~ 245 (334)
.-+|
T Consensus 160 DAlP 163 (387)
T 1zkd_A 160 DVLP 163 (387)
T ss_dssp GGSC
T ss_pred ccCc
Confidence 5554
No 386
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=86.05 E-value=0.21 Score=36.41 Aligned_cols=32 Identities=31% Similarity=0.585 Sum_probs=22.9
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
..+.||.||..-.... ..++|.|..|+..+..
T Consensus 35 aky~CpfCgk~~vKR~---------a~GIW~C~kCg~~~AG 66 (103)
T 4a17_Y 35 AKYGCPFCGKVAVKRA---------AVGIWKCKPCKKIIAG 66 (103)
T ss_dssp SCEECTTTCCEEEEEE---------ETTEEEETTTTEEEEC
T ss_pred cCCCCCCCCCceeeec---------CcceEEcCCCCCEEeC
Confidence 4588999998633221 3479999999987743
No 387
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=85.97 E-value=1.5 Score=39.32 Aligned_cols=61 Identities=18% Similarity=0.182 Sum_probs=47.1
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----CC---CCCCceEEEeC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----NF---PKDSIDAVHAG 238 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~~---~~~~fD~V~~~ 238 (334)
.+.++||+.||.|.+...+...|. ..+.++|+++.+++..+.++.... .+ .-..+|+|+..
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~~~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEKPEGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCCCBSCGGGSCGGGSCCCSEEEEE
T ss_pred CCCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCCCcCCHHHcCHhhCCCCCEEEEC
Confidence 357899999999999999999884 467899999999998888865321 01 11258999975
No 388
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=85.85 E-value=0.57 Score=42.52 Aligned_cols=88 Identities=14% Similarity=0.211 Sum_probs=58.4
Q ss_pred cCCCCCCcEEEECCCc-CHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhcCC--------C----CCCCCceEEEeC
Q 019861 173 LKPVLGGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES--------N----FPKDSIDAVHAG 238 (334)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~~~--------~----~~~~~fD~V~~~ 238 (334)
.+..++.+||-+|+|. |.++..+++. |. +|+++|.++..++.+++. .... . +. +.+|+|+-.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~~~~~~~l-Ga~~v~~~~~~~~~~~~~~-~~~D~vid~ 250 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRKREDAMKM-GADHYIATLEEGDWGEKYF-DTFDLIVVC 250 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHH-TCSEEEEGGGTSCHHHHSC-SCEEEEEEC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHc-CCCEEEcCcCchHHHHHhh-cCCCEEEEC
Confidence 4556789999999864 6666666654 44 899999998888888763 2110 0 11 468999865
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
-.-. +...++...+.|+++|+++...
T Consensus 251 ~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 251 ASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 4320 0112556788999999988643
No 389
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=85.76 E-value=0.21 Score=34.25 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=22.9
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
.....||.|+..-.... ..++|.|..|+..+..
T Consensus 25 ~~ky~C~fCgk~~vkR~---------a~GIW~C~~C~~~~AG 57 (73)
T 1ffk_W 25 KKKYKCPVCGFPKLKRA---------STSIWVCGHCGYKIAG 57 (73)
T ss_pred ccCccCCCCCCceeEEE---------EeEEEECCCCCcEEEC
Confidence 34588999998432211 2378999999987643
No 390
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.71 E-value=3.1 Score=37.12 Aligned_cols=93 Identities=17% Similarity=0.095 Sum_probs=59.8
Q ss_pred ccCCCCCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC--------CCCCCceEEE
Q 019861 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--------FPKDSIDAVH 236 (334)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~--------~~~~~fD~V~ 236 (334)
.....++.+||=+|+|. |.++..+++......++++|.++.-++.+++.-... .. -....+|+|+
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d~v~ 234 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLIL 234 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSEEEE
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCccccc
Confidence 34456688999999876 455555555532346789999999888887632110 00 0123467776
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
..- ..+ ..++...+.|++||.+++....
T Consensus 235 d~~-----G~~-~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 235 ETA-----GVP-QTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp ECS-----CSH-HHHHHHHHHCCTTCEEEECCCC
T ss_pred ccc-----ccc-chhhhhhheecCCeEEEEEecc
Confidence 443 222 4578888999999998875543
No 391
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=85.37 E-value=1.4 Score=40.07 Aligned_cols=88 Identities=16% Similarity=0.111 Sum_probs=56.0
Q ss_pred CCC-CCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCCC----------CCCCceEEEeCccc
Q 019861 174 KPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF----------PKDSIDAVHAGAAI 241 (334)
Q Consensus 174 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~----------~~~~fD~V~~~~vl 241 (334)
... ++.+||-+|+|. |.++..+++.. ..+|+++|.++..++.+++.+.....+ ..+.+|+|+..-..
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 344 688999999764 55555665543 248999999988777766433221100 01358998865432
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.. .++...+.|+++|+++...
T Consensus 262 ~~------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 262 VH------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp CC------CSHHHHHHEEEEEEEEECC
T ss_pred HH------HHHHHHHHHhcCCEEEEEc
Confidence 21 2456778899999987754
No 392
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=85.12 E-value=0.38 Score=36.50 Aligned_cols=30 Identities=30% Similarity=0.685 Sum_probs=22.9
Q ss_pred eeCCCCCCCccccCCCCcccccccCCcccccccccccccc
Q 019861 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 72 l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
-.||.|++...-.. ...+.|+.|++.|...
T Consensus 28 P~CP~C~seytYeD----------g~l~vCPeC~hEW~~~ 57 (138)
T 2akl_A 28 PPCPQCNSEYTYED----------GALLVCPECAHEWSPN 57 (138)
T ss_dssp CCCTTTCCCCCEEC----------SSSEEETTTTEEECTT
T ss_pred CCCCCCCCcceEec----------CCeEECCccccccCCc
Confidence 46999999765443 2579999999999543
No 393
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=84.38 E-value=0.29 Score=30.93 Aligned_cols=39 Identities=18% Similarity=0.419 Sum_probs=22.6
Q ss_pred CceeCCCCCCCccccCCC-CcccccccCCccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDS-SLSIESAAGSSLQCNTCKKTY 108 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~-~~~~~~~~~~~~~C~~C~~~~ 108 (334)
....||.|+......... .-+-+.....++.|.+|++.+
T Consensus 8 ~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w 47 (50)
T 1tfi_A 8 DLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 47 (50)
T ss_dssp CCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEE
T ss_pred CccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeE
Confidence 347899999965322110 011111233579999999865
No 394
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=83.77 E-value=1.2 Score=40.16 Aligned_cols=61 Identities=13% Similarity=0.134 Sum_probs=46.9
Q ss_pred CcEEEECCCcCHHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHHhcCC----C---CC-----CCCceEEEeCc
Q 019861 179 GNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQES----N---FP-----KDSIDAVHAGA 239 (334)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~-~~~v~giD~s~~~~~~a~~~~~~~~----~---~~-----~~~fD~V~~~~ 239 (334)
.++||+-||.|.+...+...|. ...+.++|+++.+++..+.++.... . +. ...+|+|+..-
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 5899999999999999999873 1368999999999999998875422 1 11 11589999853
No 395
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=83.50 E-value=0.57 Score=30.19 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=21.8
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCcccccccccccc
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
+.-||.||..+.... ....+.|..|+..+.
T Consensus 18 ~~fCPkCG~~~~ma~---------~~dr~~C~kCgyt~~ 47 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAE---------HADRYSCGRCGYTEF 47 (55)
T ss_dssp SCCCTTTTTTCCCEE---------CSSEEECTTTCCCEE
T ss_pred cccCcCCCCceeEec---------cCCEEECCCCCCEEE
Confidence 577999999664332 235899999997753
No 396
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=83.42 E-value=1.1 Score=39.34 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=56.3
Q ss_pred CCCCCcEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--CCCC--------CCceEEEeCcccc
Q 019861 175 PVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--NFPK--------DSIDAVHAGAAIH 242 (334)
Q Consensus 175 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--~~~~--------~~fD~V~~~~vl~ 242 (334)
..++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+++. .... ...+ +.+|+|+. ..
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-ga~~~~~~~~~~~~~~~~~~~d~vid-~g-- 197 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL-GAEEAATYAEVPERAKAWGGLDLVLE-VR-- 197 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT-TCSEEEEGGGHHHHHHHTTSEEEEEE-CS--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-CCCEEEECCcchhHHHHhcCceEEEE-CC--
Confidence 456889999998 3466666666653 24999999998877777642 1110 0111 46898886 32
Q ss_pred CCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 243 CWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 243 h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
. ..++...+.|+++|+++...
T Consensus 198 ---~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 198 ---G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp ---C--TTHHHHHTTEEEEEEEEEC-
T ss_pred ---H--HHHHHHHHhhccCCEEEEEe
Confidence 1 24788899999999988743
No 397
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=83.22 E-value=2 Score=38.13 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=56.7
Q ss_pred cEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----------CCCCCCCceEEEeCccccCCCCH
Q 019861 180 NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----------SNFPKDSIDAVHAGAAIHCWSSP 247 (334)
Q Consensus 180 ~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----------~~~~~~~fD~V~~~~vl~h~~d~ 247 (334)
+||=+|+ |.|.++..+++.. ..+|+++|.++..++.+++.-... ..+..+.+|+|+-. ...+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~-----~g~~ 222 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDT-----VGDK 222 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEES-----SCHH
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEEC-----CCcH
Confidence 4999997 3477777777764 349999999999888887642110 11223568887654 3332
Q ss_pred HHHHHHHHHcccCCcEEEEEE
Q 019861 248 STGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 248 ~~~L~~i~r~LkpgG~lii~~ 268 (334)
.+....+.|+++|+++...
T Consensus 223 --~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 223 --VLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp --HHHHHHHTEEEEEEEEECC
T ss_pred --HHHHHHHHHhcCCEEEEEe
Confidence 7889999999999988754
No 398
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.18 E-value=17 Score=36.02 Aligned_cols=83 Identities=8% Similarity=0.127 Sum_probs=50.0
Q ss_pred eEEEeCccccCCCCH--HHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhh----hcCccCCCCHHHHHHH
Q 019861 233 DAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ----ISGSYTFLSEREIEDL 306 (334)
Q Consensus 233 D~V~~~~vl~h~~d~--~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~t~~~l~~l 306 (334)
=++++-.+|.+++.. .++|+.+.+ + ++|.+++.+..... ....++.+.+...+.. ......+.+.++..+.
T Consensus 219 tl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~-~~~d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~ 295 (695)
T 2zwa_A 219 KVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPK-GPFEPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQR 295 (695)
T ss_dssp EEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTT-CTTSHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHH
T ss_pred EEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCC-CCCChHHHHHHHHHHHcCCCCCccccCCCHHHHHHH
Confidence 355666777777633 467777775 4 67777776654321 1223333333333322 2223456789999999
Q ss_pred HHhCCCcEEEEe
Q 019861 307 CRACGLVDFKCT 318 (334)
Q Consensus 307 l~~~Gf~~v~~~ 318 (334)
|.++||+.+...
T Consensus 296 ~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 296 FNKLGFAYVNVG 307 (695)
T ss_dssp HHHTTCCEEEEE
T ss_pred HHHCCCCCccee
Confidence 999999876644
No 399
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=82.65 E-value=0.73 Score=31.28 Aligned_cols=28 Identities=18% Similarity=0.500 Sum_probs=21.0
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~ 106 (334)
...+.|+.||....... ....+|+.||+
T Consensus 26 ~v~Y~C~~CG~~~e~~~----------~d~irCp~CG~ 53 (70)
T 1twf_L 26 TLKYICAECSSKLSLSR----------TDAVRCKDCGH 53 (70)
T ss_dssp CCCEECSSSCCEECCCT----------TSTTCCSSSCC
T ss_pred eEEEECCCCCCcceeCC----------CCCccCCCCCc
Confidence 45689999999755432 14579999998
No 400
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=82.43 E-value=0.32 Score=37.08 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=22.8
Q ss_pred cCCcccccccccccccccCccccccc
Q 019861 95 AGSSLQCNTCKKTYSGVGTHFDMTAA 120 (334)
Q Consensus 95 ~~~~~~C~~C~~~~~~~~~~~~~~~~ 120 (334)
..+.+.|++||+.|+..+|+++.+..
T Consensus 96 ~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 96 VEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEETTTCCEEEEETTEEECSSC
T ss_pred EEEEEECCCCCCEeeccCCcccHHHh
Confidence 55789999999999999999988653
No 401
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=82.29 E-value=0.65 Score=29.35 Aligned_cols=29 Identities=14% Similarity=0.214 Sum_probs=22.0
Q ss_pred CCCceeCCCCCCCccccCCCCcccccccCCcccccccccccc
Q 019861 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 68 ~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
......||.|+..+. .+.+.|..||+...
T Consensus 11 ~~~k~iCpkC~a~~~-------------~gaw~CrKCG~~~l 39 (51)
T 3j21_g 11 IFKKYVCLRCGATNP-------------WGAKKCRKCGYKRL 39 (51)
T ss_dssp SSSEEECTTTCCEEC-------------TTCSSCSSSSSCCC
T ss_pred HhCCccCCCCCCcCC-------------CCceecCCCCCccc
Confidence 346788999999722 26899999998743
No 402
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=82.05 E-value=0.38 Score=34.03 Aligned_cols=39 Identities=13% Similarity=0.424 Sum_probs=25.6
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCcccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
..|.||.|++....... + ........+.|..|+..|...
T Consensus 22 t~F~CPfCnh~~sV~vk--i-dk~~~~g~l~C~~Cg~~~~~~ 60 (85)
T 1wii_A 22 TQFTCPFCNHEKSCDVK--M-DRARNTGVISCTVCLEEFQTP 60 (85)
T ss_dssp SCCCCTTTCCSSCEEEE--E-ETTTTEEEEEESSSCCEEEEE
T ss_pred CeEcCCCCCCCCeEEEE--E-EccCCEEEEEcccCCCeEEec
Confidence 46899999997433221 0 112245789999999888554
No 403
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=81.96 E-value=1.1 Score=41.93 Aligned_cols=45 Identities=13% Similarity=0.242 Sum_probs=33.7
Q ss_pred CCcEEEECCCcCHHHHHHHHc----CC-CCeEEEEeCCHHHHHHHHHHHh
Q 019861 178 GGNIIDASCGSGLFSRIFAKS----GL-FSLVVALDYSENMLKQCYEFVQ 222 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~----~~-~~~v~giD~s~~~~~~a~~~~~ 222 (334)
...|+|+|.|.|.++..+.+. .+ ..+|+.||+|+...+.-++++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 187 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLG 187 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHh
Confidence 369999999999987666543 21 2379999999988777666654
No 404
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=81.72 E-value=3.1 Score=37.11 Aligned_cols=44 Identities=25% Similarity=0.298 Sum_probs=29.7
Q ss_pred CCCCCceEEEeC--cccc---CC---------CCHHHHHHHHHHcccCCcEEEEEEec
Q 019861 227 FPKDSIDAVHAG--AAIH---CW---------SSPSTGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 227 ~~~~~fD~V~~~--~vl~---h~---------~d~~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
+++++||+|++. +... +. ......|++++++|+|||.+++....
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 446678888875 1111 11 12457889999999999999987654
No 405
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=80.96 E-value=0.94 Score=36.90 Aligned_cols=41 Identities=12% Similarity=0.283 Sum_probs=25.3
Q ss_pred CCceeCCCCCCCccccCCC-CcccccccCCcccccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDS-SLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~-~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
...+.||-||+........ .-+.......++.|..||+.|.
T Consensus 135 t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w~ 176 (178)
T 3po3_S 135 TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRWK 176 (178)
T ss_dssp BSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEEC
T ss_pred cCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCeec
Confidence 3467899999965332211 1111223556899999998763
No 406
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=80.43 E-value=1.6 Score=39.29 Aligned_cols=116 Identities=14% Similarity=0.113 Sum_probs=72.1
Q ss_pred CcEEEECCCcCHHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHHhcCC----C--------CCCCCceEEEeCcccc---
Q 019861 179 GNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQES----N--------FPKDSIDAVHAGAAIH--- 242 (334)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~giD~s~~~~~~a~~~~~~~~----~--------~~~~~fD~V~~~~vl~--- 242 (334)
.+++|+-||.|.+...+...|.. ..+.++|+++.+.+..+.++.... . ++...+|+++...--.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS 83 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFT 83 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchh
Confidence 48999999999999999988742 357899999999988888765432 1 1123689998642211
Q ss_pred ------CCCCHH-HHHHHHHH---ccc-CCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 243 ------CWSSPS-TGVAEISR---VLR-PGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 243 ------h~~d~~-~~L~~i~r---~Lk-pgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
...|+. ..+.++.+ .++ | .+++.+....- ... -..+.+.+.|++.|
T Consensus 84 ~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~gl----~~~-----------------~~~~~i~~~l~~~G 140 (333)
T 4h0n_A 84 RNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKGF----ENS-----------------TVRNLFIDKLKECN 140 (333)
T ss_dssp ETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTTG----GGS-----------------HHHHHHHHHHHHTT
T ss_pred hhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchhh----hhh-----------------hHHHHHHHHHHhCC
Confidence 223333 23333333 344 5 44554544321 000 02457888899999
Q ss_pred CcEEEE
Q 019861 312 LVDFKC 317 (334)
Q Consensus 312 f~~v~~ 317 (334)
+.+...
T Consensus 141 Y~v~~~ 146 (333)
T 4h0n_A 141 FIYQEF 146 (333)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 987553
No 407
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=80.15 E-value=0.63 Score=31.68 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=21.9
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCcccccccccccccc
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
.+.|| |+....... .....+|+ ||......
T Consensus 4 vv~C~-C~~~~~~~~---------~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 4 IFRCD-CGRALYSRE---------GAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp EEEET-TSCCEEEET---------TCSEEEET-TTEEEECC
T ss_pred EEECC-CCCEEEEcC---------CCcEEECC-CCCeeeec
Confidence 46799 999765543 33679999 99877554
No 408
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=80.09 E-value=0.25 Score=34.44 Aligned_cols=39 Identities=15% Similarity=0.361 Sum_probs=21.6
Q ss_pred eeCCCCCCC-ccccCCC-Ccc--cc--cc-cCCccccccccccccc
Q 019861 72 LACPICYKP-LTWIGDS-SLS--IE--SA-AGSSLQCNTCKKTYSG 110 (334)
Q Consensus 72 l~CPiC~~~-l~~~~~~-~~~--~~--~~-~~~~~~C~~C~~~~~~ 110 (334)
..||+|++. +...... .+. .. .+ ....+.|++||-.|..
T Consensus 3 m~Cp~Cg~~~l~~~~~~~~~~~~G~~~~I~~Vp~~~C~~CGE~~~~ 48 (78)
T 3ga8_A 3 MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMN 48 (78)
T ss_dssp CBCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEETTTCCEECC
T ss_pred eECCCCCCCeeEeEEEEEEEEECCEEEEEcCceeEECCCCCCEEEC
Confidence 369999975 4221100 011 11 11 3368999999987744
No 409
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=79.92 E-value=4.7 Score=36.04 Aligned_cols=89 Identities=12% Similarity=0.015 Sum_probs=59.4
Q ss_pred cccCCCCCCcEEEECC-C-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC----CC--------CCCCCceEEE
Q 019861 171 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE----SN--------FPKDSIDAVH 236 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~----~~--------~~~~~fD~V~ 236 (334)
+.....++.+||-+|+ | .|..+..+++.. ..+|+++ .++..++.+++.-... .. .....+|+|+
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~lGa~~i~~~~~~~~~~~~~~~~~g~D~vi 221 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVY 221 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHHTSEEEETTSCHHHHHHHHHTTSCEEEEE
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHcCCCEeccCCCHHHHHHHHhcCCCceEEE
Confidence 4455667899999994 3 466766666653 3489999 7888888776542111 00 0124689888
Q ss_pred eCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 237 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 237 ~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
-.-. . ..+....+.|+++|.++...
T Consensus 222 d~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 222 DTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp ESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred ECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 6533 2 36888889999999988753
No 410
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=79.62 E-value=4.7 Score=37.70 Aligned_cols=88 Identities=18% Similarity=0.228 Sum_probs=60.2
Q ss_pred cCCCCCCcEEEECC-C-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CCC-----------------
Q 019861 173 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SNF----------------- 227 (334)
Q Consensus 173 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~~----------------- 227 (334)
....++.+||=+|+ | .|.++..+++.. ..++++++.++.-++.+++.-... ..+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHH
Confidence 45567889999997 3 466777776653 348999999998888887642110 011
Q ss_pred --------CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 228 --------PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 228 --------~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
....+|+|+-.-. . ..+....+.|++||++++.-
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEEe
Confidence 1246888875432 2 46888899999999988753
No 411
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=79.29 E-value=6.9 Score=36.34 Aligned_cols=87 Identities=18% Similarity=0.136 Sum_probs=59.1
Q ss_pred cCCCCCCcEEEECC-C-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------CC----------------
Q 019861 173 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------NF---------------- 227 (334)
Q Consensus 173 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~~---------------- 227 (334)
....++.+||-+|+ | .|..+..+++.. ..++++++.++..++.+++. .... .+
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l-Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 293 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL-GCDLVINRAELGITDDIADDPRRVVETGR 293 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-TCCCEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-CCCEEEecccccccccccccccccchhhh
Confidence 45567899999997 3 366666666653 34899999999888887652 1110 11
Q ss_pred ---------CCCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 228 ---------PKDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 228 ---------~~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
....+|+|+-...- ..++...+.|++||++++..
T Consensus 294 ~~~~~v~~~~g~g~Dvvid~~G~-------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 294 KLAKLVVEKAGREPDIVFEHTGR-------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHSSCCSEEEECSCH-------HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHHhCCCceEEEECCCc-------hHHHHHHHHHhcCCEEEEEe
Confidence 02358988865432 35788889999999988754
No 412
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=79.22 E-value=3.5 Score=37.14 Aligned_cols=84 Identities=14% Similarity=0.132 Sum_probs=55.1
Q ss_pred CcEEEECCCc-CHHH-HHHH-HcCCCCe-EEEEeCCHH---HHHHHHHHHhcCCCCC----------CCCceEEEeCccc
Q 019861 179 GNIIDASCGS-GLFS-RIFA-KSGLFSL-VVALDYSEN---MLKQCYEFVQQESNFP----------KDSIDAVHAGAAI 241 (334)
Q Consensus 179 ~~vLDiGcG~-G~~~-~~l~-~~~~~~~-v~giD~s~~---~~~~a~~~~~~~~~~~----------~~~fD~V~~~~vl 241 (334)
.+||-+|+|. |.++ ..++ +.. ..+ |+++|.+++ .++.+++.-....... .+.+|+|+-.-
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~i~~~~gg~Dvvid~~-- 250 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEAT-- 250 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTTCEEEETTTSCGGGHHHHSCCEEEEEECS--
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcCCcccCCCccCHHHHHHhCCCCCEEEECC--
Confidence 8999999854 5666 6666 543 335 999999887 7787765311100010 12578887543
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
..+ ..++.+.+.|+++|+++....
T Consensus 251 ---g~~-~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 251 ---GFP-KHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp ---CCH-HHHHHHHHHEEEEEEEEECCC
T ss_pred ---CCh-HHHHHHHHHHhcCCEEEEEeC
Confidence 232 357889999999999887543
No 413
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=78.76 E-value=4.6 Score=36.46 Aligned_cols=84 Identities=15% Similarity=0.151 Sum_probs=54.1
Q ss_pred CCcEEEECCCc-CHHHHHHHHc-CCCCeEEEEeCCH---HHHHHHHHHHhcC--C-CCC------CCCceEEEeCccccC
Q 019861 178 GGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSE---NMLKQCYEFVQQE--S-NFP------KDSIDAVHAGAAIHC 243 (334)
Q Consensus 178 ~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~giD~s~---~~~~~a~~~~~~~--~-~~~------~~~fD~V~~~~vl~h 243 (334)
+.+||-+|+|. |..+..+++. |. +|+++|.++ +.++.+++.-... . .+. .+.+|+|+.....
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~~~~~~d~vid~~g~-- 256 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDATGA-- 256 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHHTCEEEECTTCSHHHHHHHCCEEEEEECCCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHhCCceechHHHHHHHHHhCCCCCEEEECCCC--
Confidence 78999999843 4455555543 54 999999987 7777776431110 0 110 1358888865432
Q ss_pred CCCHHHHH-HHHHHcccCCcEEEEEEe
Q 019861 244 WSSPSTGV-AEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 244 ~~d~~~~L-~~i~r~LkpgG~lii~~~ 269 (334)
+ ..+ +...+.|+++|++++...
T Consensus 257 ---~-~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 257 ---D-VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp ---C-THHHHHHGGGEEEEEEEEECSC
T ss_pred ---h-HHHHHHHHHHHhcCCEEEEEec
Confidence 2 135 888999999999887543
No 414
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=78.54 E-value=2.7 Score=38.48 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=37.2
Q ss_pred CcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh
Q 019861 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ 222 (334)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~ 222 (334)
.++||+-||.|.++..+..+|. ..+.++|+++.+.+..+.++.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N~~ 45 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAINFP 45 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHHCT
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHhCC
Confidence 5899999999999999999984 456799999999988887754
No 415
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=78.03 E-value=9.9 Score=33.61 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=55.8
Q ss_pred CCcEEEECCCc--CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---CCCCC---CCCceEEEeCccccCCCCHHH
Q 019861 178 GGNIIDASCGS--GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFP---KDSIDAVHAGAAIHCWSSPST 249 (334)
Q Consensus 178 ~~~vLDiGcG~--G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~---~~~fD~V~~~~vl~h~~d~~~ 249 (334)
..+|.=||+|. +.++..+.+.|...+|+++|.++..++.+.+.-.. ..... -...|+|+..--.. ....
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~---~~~~ 109 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR---TFRE 109 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG---GHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH---HHHH
Confidence 36899999885 34566677777545899999999888777653110 01111 23578888764322 2356
Q ss_pred HHHHHHHcccCCcEEE
Q 019861 250 GVAEISRVLRPGGVFV 265 (334)
Q Consensus 250 ~L~~i~r~LkpgG~li 265 (334)
+++++...|++|..++
T Consensus 110 vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 110 IAKKLSYILSEDATVT 125 (314)
T ss_dssp HHHHHHHHSCTTCEEE
T ss_pred HHHHHhhccCCCcEEE
Confidence 7888999999887554
No 416
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=77.90 E-value=12 Score=27.01 Aligned_cols=69 Identities=10% Similarity=0.171 Sum_probs=45.4
Q ss_pred eEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCC
Q 019861 233 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 312 (334)
Q Consensus 233 D~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf 312 (334)
|.++-.-.+.+ |.|.-..++..+-|++|..|.+..-+. -..+++.+++++.|+
T Consensus 26 ~~~LD~rGl~C-P~Pvl~tkkaL~~l~~Ge~L~Vl~dd~--------------------------~a~~dI~~~~~~~G~ 78 (98)
T 1jdq_A 26 TKTLDVRGEVC-PVPDVETKRALQNMKPGEILEVWIDYP--------------------------MSKERIPETVKKLGH 78 (98)
T ss_dssp CEEEECSSCCS-SHHHHHHHHHHHTCCTTCEEEEEESSC--------------------------THHHHHHHHHHHSSC
T ss_pred CEEEeCCCCCC-CHHHHHHHHHHHhCCCCCEEEEEECCc--------------------------cHHHHHHHHHHHCCC
Confidence 44444444443 456555667777789998877755442 136789999999999
Q ss_pred cEEEEee--cCcEEEEEE
Q 019861 313 VDFKCTR--NRGFVMFTA 328 (334)
Q Consensus 313 ~~v~~~~--~g~~~~~~a 328 (334)
+++.... .+.|.+++.
T Consensus 79 ~v~~~e~~~~g~~~i~I~ 96 (98)
T 1jdq_A 79 EVLEIEEVGPSEWKIYIK 96 (98)
T ss_dssp CEEEEEECSSSCEEEEEE
T ss_pred EEEEEEEecCCEEEEEEE
Confidence 9888664 455555543
No 417
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=77.80 E-value=1.3 Score=29.23 Aligned_cols=41 Identities=12% Similarity=0.203 Sum_probs=29.9
Q ss_pred cccCCCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccC
Q 019861 65 ASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (334)
Q Consensus 65 ~~~~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~ 113 (334)
..+......||-|+......++ ....+.|..|+.+...+.|
T Consensus 9 PnS~Fm~VkCp~C~~~q~VFSh--------a~t~V~C~~Cgt~L~~PTG 49 (63)
T 3j20_W 9 PRSRFLRVKCIDCGNEQIVFSH--------PATKVRCLICGATLVEPTG 49 (63)
T ss_dssp CSCCEEEEECSSSCCEEEEESS--------CSSCEECSSSCCEEEECCS
T ss_pred CCCcEEEEECCCCCCeeEEEec--------CCeEEEccCcCCEEecCCC
Confidence 3455667889999997655543 3468999999988776644
No 418
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=77.75 E-value=1.6 Score=33.70 Aligned_cols=42 Identities=17% Similarity=0.289 Sum_probs=33.1
Q ss_pred CCCCCCCceEEEeCcccc--CCCCHHHHHHHHHHcccCCcEEEE
Q 019861 225 SNFPKDSIDAVHAGAAIH--CWSSPSTGVAEISRVLRPGGVFVG 266 (334)
Q Consensus 225 ~~~~~~~fD~V~~~~vl~--h~~d~~~~L~~i~r~LkpgG~lii 266 (334)
-.++..+||.|+...--+ +..=|..++..+.+.|||||.|..
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 468899999999754333 233458999999999999999886
No 419
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=77.55 E-value=1.1 Score=29.74 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=27.6
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccC
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~ 113 (334)
.....||-|+......+. ....+.|..|+.+...+.|
T Consensus 5 Fm~VKCp~C~niq~VFSh--------A~tvV~C~~Cg~~L~~PTG 41 (66)
T 1qxf_A 5 FVKVKCPDCEHEQVIFDH--------PSTIVKCIICGRTVAEPTG 41 (66)
T ss_dssp EEEEECTTTCCEEEEESS--------CSSCEECSSSCCEEEECCS
T ss_pred eEEEECCCCCCceEEEec--------CceEEEcccCCCEEeecCC
Confidence 456789999996655543 3468999999998877644
No 420
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=77.54 E-value=3.3 Score=36.73 Aligned_cols=86 Identities=12% Similarity=0.017 Sum_probs=56.1
Q ss_pred CCCCCC-cEEEECC--CcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-------------CCCCCCCceEEEe
Q 019861 174 KPVLGG-NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-------------SNFPKDSIDAVHA 237 (334)
Q Consensus 174 ~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-------------~~~~~~~fD~V~~ 237 (334)
+..++. +||-+|+ |.|.++..+++.. ..++++++.++..++.+++. ... .....+.+|+|+-
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-Ga~~~i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL-GAKEVLAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT-TCSEEEECC---------CCSCCEEEEEE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc-CCcEEEecCCcHHHHHHHhcCCcccEEEE
Confidence 344454 8999997 4467777776653 24899999988877777652 111 0111245888775
Q ss_pred CccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 238 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 238 ~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.-. . ..+....+.|+++|++++.-
T Consensus 223 ~~g-----~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 223 PVG-----G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CST-----T--TTHHHHHHTEEEEEEEEECS
T ss_pred CCc-----H--HHHHHHHHhhccCCEEEEEe
Confidence 432 2 14778889999999988753
No 421
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=77.34 E-value=2.7 Score=31.40 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=23.2
Q ss_pred eeCCCCCCCccccCC-CCcccccccCCcccccccccccc
Q 019861 72 LACPICYKPLTWIGD-SSLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 72 l~CPiC~~~l~~~~~-~~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
..||-||+....... +.-+-......++.|.+|++.+.
T Consensus 73 ~~Cp~C~~~~a~~~q~q~rsade~mt~fy~C~~C~~~w~ 111 (113)
T 3h0g_I 73 KECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFE 111 (113)
T ss_dssp SCCSSSCCSCEEEECCCCSSCCCCCCCEEEESSSCCCCC
T ss_pred cCCCCCCCceEEEEEEecccCCCCCeeEEEcCCCCCEEe
Confidence 789999996433221 11112222445799999998764
No 422
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=76.49 E-value=3.5 Score=36.56 Aligned_cols=86 Identities=12% Similarity=0.098 Sum_probs=56.4
Q ss_pred CCCCCC-cEEEECC--CcCHHHHHHHHc-CCCCeEEEEeCCHHHHHHHHHHHhc---------C---CCCCCCCceEEEe
Q 019861 174 KPVLGG-NIIDASC--GSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQ---------E---SNFPKDSIDAVHA 237 (334)
Q Consensus 174 ~~~~~~-~vLDiGc--G~G~~~~~l~~~-~~~~~v~giD~s~~~~~~a~~~~~~---------~---~~~~~~~fD~V~~ 237 (334)
+..++. +||-+|+ |.|..+..+++. |. ++++++.+++.++.+++.-.. . .....+.+|+|+-
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid 223 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY--DVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVD 223 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC--CEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEE
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEE
Confidence 334454 8999997 346666666654 54 899999988777777653110 0 1122346888875
Q ss_pred CccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 238 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 238 ~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
.- .. ..+....+.|+++|++++..
T Consensus 224 ~~-----g~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 224 PV-----GG--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp SC-----CT--HHHHHHHTTEEEEEEEEECC
T ss_pred CC-----cH--HHHHHHHHhhcCCCEEEEEe
Confidence 43 33 25888999999999988754
No 423
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=76.41 E-value=1.7 Score=28.74 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=23.4
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
...+.|..||....... ....+|+.||+-...
T Consensus 19 ~v~Y~C~~Cg~~~~l~~----------~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQA----------KEVIRCRECGHRVMY 50 (63)
T ss_dssp CCCCBCSSSCCBCCCCS----------SSCCCCSSSCCCCCB
T ss_pred CeEEECCCCCCeeecCC----------CCceECCCCCcEEEE
Confidence 45689999999765432 257999999975543
No 424
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=75.94 E-value=5 Score=38.11 Aligned_cols=86 Identities=12% Similarity=0.003 Sum_probs=51.5
Q ss_pred CCCCCcEEEECCCc-CHHHHHHHH-cCCCCeEEEEeCCHHHHHHHHHHHhcCCCCC--CCCceEEEeCccccCCCCHHHH
Q 019861 175 PVLGGNIIDASCGS-GLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFP--KDSIDAVHAGAAIHCWSSPSTG 250 (334)
Q Consensus 175 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~giD~s~~~~~~a~~~~~~~~~~~--~~~fD~V~~~~vl~h~~d~~~~ 250 (334)
..++.+|+=+|+|. |......++ .| .+|+++|.++...+.+++.-.....+. -...|+|+..-.-.++-+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~G--a~Viv~d~~~~~~~~A~~~Ga~~~~l~e~l~~aDvVi~atgt~~~i~---- 344 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQG--ARVSVTEIDPINALQAMMEGFDVVTVEEAIGDADIVVTATGNKDIIM---- 344 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHHHHHHHHHTTCEECCHHHHGGGCSEEEECSSSSCSBC----
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHcCCEEecHHHHHhCCCEEEECCCCHHHHH----
Confidence 34588999999875 444333333 34 499999999987766654211100100 135788887543233211
Q ss_pred HHHHHHcccCCcEEEEE
Q 019861 251 VAEISRVLRPGGVFVGT 267 (334)
Q Consensus 251 L~~i~r~LkpgG~lii~ 267 (334)
.+..+.||+||+++..
T Consensus 345 -~~~l~~mk~ggilvnv 360 (494)
T 3ce6_A 345 -LEHIKAMKDHAILGNI 360 (494)
T ss_dssp -HHHHHHSCTTCEEEEC
T ss_pred -HHHHHhcCCCcEEEEe
Confidence 2566778999988753
No 425
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=75.27 E-value=17 Score=24.99 Aligned_cols=72 Identities=15% Similarity=0.168 Sum_probs=45.2
Q ss_pred ceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 232 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
.|..+-.-.+.+ |.|.-.+++..+-|++|..+.+..-+. -..+++.+++++.|
T Consensus 9 ~~~~lD~rGl~C-P~Pvl~~kkal~~l~~G~~l~V~~dd~--------------------------~a~~di~~~~~~~G 61 (82)
T 3lvj_C 9 PDHTLDALGLRC-PEPVMMVRKTVRNMQPGETLLIIADDP--------------------------ATTRDIPGFCTFME 61 (82)
T ss_dssp CSEEEECTTCCT-THHHHHHHHHHHTSCTTCEEEEEECCT--------------------------THHHHHHHHHHHTT
T ss_pred CCEEEECCCCCC-CHHHHHHHHHHHhCCCCCEEEEEECCc--------------------------cHHHHHHHHHHHCC
Confidence 344444433333 456555667777788999877755432 14668999999999
Q ss_pred CcEEEEeecCcEEEEEEEc
Q 019861 312 LVDFKCTRNRGFVMFTATK 330 (334)
Q Consensus 312 f~~v~~~~~g~~~~~~a~K 330 (334)
++++.....+..+.+..+|
T Consensus 62 ~~~~~~~~~~~~~~i~I~K 80 (82)
T 3lvj_C 62 HELVAKETDGLPYRYLIRK 80 (82)
T ss_dssp CEEEEEECSSSSEEEEEEC
T ss_pred CEEEEEEecCCEEEEEEEE
Confidence 9988865444333344444
No 426
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=74.48 E-value=4 Score=32.31 Aligned_cols=86 Identities=16% Similarity=0.154 Sum_probs=54.4
Q ss_pred CCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCH-------------------HHHHHHHHHHhcCCCCCCCCceEEEeC
Q 019861 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE-------------------NMLKQCYEFVQQESNFPKDSIDAVHAG 238 (334)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~-------------------~~~~~a~~~~~~~~~~~~~~fD~V~~~ 238 (334)
.+-|||+|-|+|..-..|.+..|...++.+|-.- +++..+..++ ....-+++..
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~~~hp~~~P~~e~~ilGdi~~tL~~~~~r~-------g~~a~LaHaD 113 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFERAVASHPDSTPPEAQLILGDIRETLPATLERF-------GATASLVHAD 113 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSCCCCGGGCCCGGGEEESCHHHHHHHHHHHH-------CSCEEEEEEC
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEeeeccCCCCCCchHheecccHHHHHHHHHHhc-------CCceEEEEee
Confidence 5689999999999999999999999999998422 2222222222 2334455554
Q ss_pred ccccCCCCHHH----HHHHHHHcccCCcEEEEEEec
Q 019861 239 AAIHCWSSPST----GVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 239 ~vl~h~~d~~~----~L~~i~r~LkpgG~lii~~~~ 270 (334)
...++-..-.. +-.-|..+|.|||.++-..+.
T Consensus 114 ~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 114 LGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp CCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred cCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 43332111111 123366788999988876665
No 427
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=73.20 E-value=6.1 Score=34.79 Aligned_cols=62 Identities=13% Similarity=0.027 Sum_probs=46.4
Q ss_pred CCCcEEEECCCcCHHHHHHHHcCCCCe-EEEEeCCHHHHHHHHHHHhcCC----C---CC------CCCceEEEeC
Q 019861 177 LGGNIIDASCGSGLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQES----N---FP------KDSIDAVHAG 238 (334)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~giD~s~~~~~~a~~~~~~~~----~---~~------~~~fD~V~~~ 238 (334)
...+++|+=||.|.+...+...|.... +.++|+++.+.+..+.++.... . +. .+.+|+++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 456999999999999999999986333 6899999998887777654321 1 11 1368999975
No 428
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=72.98 E-value=0.82 Score=40.69 Aligned_cols=41 Identities=20% Similarity=0.233 Sum_probs=22.6
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCcccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
..-.||+||+.-...... ......+..+++|.-|++.+...
T Consensus 181 ~~~~CPvCGs~P~~s~l~-~~g~~~G~R~l~Cs~C~t~W~~~ 221 (309)
T 2fiy_A 181 SRTLCPACGSPPMAGMIR-QGGKETGLRYLSCSLCACEWHYV 221 (309)
T ss_dssp TCSSCTTTCCCEEEEEEE-C----CCEEEEEETTTCCEEECC
T ss_pred cCCCCCCCCCcCceeEEe-ecCCCCCcEEEEeCCCCCEEeec
Confidence 346799999954322110 00112344678888888777553
No 429
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=72.70 E-value=13 Score=33.50 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=55.0
Q ss_pred CCCCCcEEEECC-C-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------CC-----CCCCceEEEeCcc
Q 019861 175 PVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------NF-----PKDSIDAVHAGAA 240 (334)
Q Consensus 175 ~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~~-----~~~~fD~V~~~~v 240 (334)
..++.+||=+|+ | .|..+..+++.. ..+|++++ ++...+.+++. .... .+ ....+|+|+-.-
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~l-Ga~~v~~~~~~~~~~~~~~~~g~D~vid~~- 256 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKL-GADDVIDYKSGSVEEQLKSLKPFDFILDNV- 256 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT-TCSEEEETTSSCHHHHHHTSCCBSEEEESS-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHc-CCCEEEECCchHHHHHHhhcCCCCEEEECC-
Confidence 557889999993 4 466766666653 34899998 66666666542 2110 00 013588887543
Q ss_pred ccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 241 IHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 241 l~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
..+...+....+.|+++|+++...
T Consensus 257 ----g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 257 ----GGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ----CTTHHHHGGGGBCSSSCCEEEESC
T ss_pred ----CChhhhhHHHHHhhcCCcEEEEeC
Confidence 344345677888999999988743
No 430
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=72.57 E-value=12 Score=32.79 Aligned_cols=88 Identities=16% Similarity=0.134 Sum_probs=55.8
Q ss_pred cccCCCCCCcEEEEC-CC-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-CCC--C------CCceEEEeCc
Q 019861 171 GYLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFP--K------DSIDAVHAGA 239 (334)
Q Consensus 171 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-~~~--~------~~fD~V~~~~ 239 (334)
+.....++.+||=+| +| .|.++..+++.. ..++++++ +....+.+++.-.... ... + ..+|+|+-.-
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~ 223 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLV 223 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEESS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEECC
Confidence 345566789999997 44 477777777664 34899888 5555666665321100 011 1 3588887543
Q ss_pred cccCCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 240 AIHCWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 240 vl~h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
..+ .+....+.|+++|+++..
T Consensus 224 -----g~~--~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 224 -----GGD--VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -----CHH--HHHHHGGGEEEEEEEEEC
T ss_pred -----CcH--HHHHHHHhccCCCEEEEe
Confidence 222 247889999999998874
No 431
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=71.86 E-value=1.1 Score=34.90 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=24.3
Q ss_pred cCCcccccccccccccccCcccccccCC
Q 019861 95 AGSSLQCNTCKKTYSGVGTHFDMTAASG 122 (334)
Q Consensus 95 ~~~~~~C~~C~~~~~~~~~~~~~~~~~~ 122 (334)
..+.+.|+.||..|+.++|+++++.+..
T Consensus 106 ~eg~L~C~~cg~~YPI~dGIP~mL~~ea 133 (141)
T 2j6a_A 106 AEGEMKCRNCGHIYYIKNGIPNLLLPPH 133 (141)
T ss_dssp EEEEEECTTTCCEEEEETTEESSCCCSS
T ss_pred cCCEEECCCCCCcccccCCccCcCCcHH
Confidence 4578999999999999999999987643
No 432
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=71.72 E-value=2.5 Score=29.30 Aligned_cols=42 Identities=17% Similarity=0.332 Sum_probs=30.9
Q ss_pred ccccCCCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccC
Q 019861 64 EASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (334)
Q Consensus 64 ~~~~~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~ 113 (334)
...+......||-|+....+.+. ....+.|..|+.+...+-|
T Consensus 27 ~PnS~Fm~VkCp~C~~~q~VFSh--------a~t~V~C~~Cg~~L~~PTG 68 (82)
T 3u5c_b 27 GPRSYFLDVKCPGCLNITTVFSH--------AQTAVTCESCSTILCTPTG 68 (82)
T ss_dssp CCCCCEEEEECTTSCSCEEEESB--------CSSCCCCSSSCCCCEECCS
T ss_pred CCCCcEEEEECCCCCCeeEEEec--------CCeEEEccccCCEEeccCC
Confidence 34555667889999997665553 3468999999988876644
No 433
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=71.17 E-value=4.9 Score=35.99 Aligned_cols=88 Identities=13% Similarity=0.051 Sum_probs=52.0
Q ss_pred cccCCCCCCcEEEECCC--cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------------CCCCCCceEE
Q 019861 171 GYLKPVLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------------NFPKDSIDAV 235 (334)
Q Consensus 171 ~~l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------------~~~~~~fD~V 235 (334)
+.....++.+||=+|++ .|.++..+++......|++++ +....+.++ +.... ....+.+|+|
T Consensus 136 ~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~~~~~~~~~~~~~~~~g~Dvv 212 (349)
T 4a27_A 136 EVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFDRNADYVQEVKRISAEGVDIV 212 (349)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEETTSCHHHHHHHHCTTCEEEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEcCCccHHHHHHHhcCCCceEE
Confidence 44556678999999983 366677777653245888888 555444444 21110 0112468988
Q ss_pred EeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 236 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 236 ~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+-.-. .+ .+....+.|+++|++++..
T Consensus 213 ~d~~g-----~~--~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 213 LDCLC-----GD--NTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEECC--------------CTTEEEEEEEEEEC
T ss_pred EECCC-----ch--hHHHHHHHhhcCCEEEEEC
Confidence 85432 22 2467889999999998754
No 434
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=70.40 E-value=5.9 Score=36.57 Aligned_cols=91 Identities=22% Similarity=0.196 Sum_probs=55.6
Q ss_pred CCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC--------------CCC------------
Q 019861 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--------------FPK------------ 229 (334)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--------------~~~------------ 229 (334)
++.+|+=+|+|. |.....++... ..+|+++|.++..++.+++.-..... +..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 568999999986 44444433332 34999999999888777652110000 110
Q ss_pred ------CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 230 ------DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 230 ------~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
...|+|+....+.--..|.-+-+++.+.+|||.+++-..
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 357999875433322233334568888999988776543
No 435
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=70.28 E-value=8.1 Score=35.28 Aligned_cols=106 Identities=18% Similarity=0.146 Sum_probs=65.9
Q ss_pred HHHHHHHcccCCCCCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHH-HhcC----CCCCCCCceEEEeC
Q 019861 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEF-VQQE----SNFPKDSIDAVHAG 238 (334)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~-~~~~----~~~~~~~fD~V~~~ 238 (334)
...+.+.+.+... +.+||.++-+.|.+...+... .+++.+.-+.......+.+ +... ...+...||+|+..
T Consensus 33 ~~~~~l~~~~~~~-~~~~l~~n~~~g~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~v~~~ 108 (381)
T 3dmg_A 33 PVHDLLQKTVEPF-GERALDLNPGVGWGSLPLEGR---MAVERLETSRAAFRCLTASGLQARLALPWEAAAGAYDLVVLA 108 (381)
T ss_dssp HHHHHHHTTCCCC-SSEEEESSCTTSTTTGGGBTT---BEEEEEECBHHHHHHHHHTTCCCEECCGGGSCTTCEEEEEEE
T ss_pred hHHHHHHHHHHHh-CCcEEEecCCCCccccccCCC---CceEEEeCcHHHHHHHHHcCCCccccCCccCCcCCCCEEEEE
Confidence 3446677777653 479999999999877666532 2677776565544443221 1110 11234679998865
Q ss_pred cccc-CCCCHHHHHHHHHHcccCCcEEEEEEeccCC
Q 019861 239 AAIH-CWSSPSTGVAEISRVLRPGGVFVGTTYIVDG 273 (334)
Q Consensus 239 ~vl~-h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~ 273 (334)
.-=. ........|.++.+.|+|||.+++...+.++
T Consensus 109 ~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~g 144 (381)
T 3dmg_A 109 LPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNKG 144 (381)
T ss_dssp CCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGGT
T ss_pred CCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHHH
Confidence 3210 0001246788899999999999998877653
No 436
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=70.01 E-value=2.2 Score=29.54 Aligned_cols=40 Identities=15% Similarity=0.294 Sum_probs=29.4
Q ss_pred ccCCCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccC
Q 019861 66 STSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (334)
Q Consensus 66 ~~~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~ 113 (334)
.+......||-|+....+.+. ....+.|..|+.+...+.|
T Consensus 27 nS~Fm~VkCp~C~n~q~VFSh--------A~t~V~C~~Cg~~L~~PTG 66 (81)
T 2xzm_6 27 NSYFMDVKCAQCQNIQMIFSN--------AQSTIICEKCSAILCKPTG 66 (81)
T ss_dssp SCCEEEEECSSSCCEEEEETT--------CSSCEECSSSCCEEEEECS
T ss_pred CCcEEEeECCCCCCeeEEEec--------CccEEEccCCCCEEeecCC
Confidence 455566789999996655543 3468999999998766644
No 437
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=69.55 E-value=7.5 Score=33.69 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=52.1
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc--------C------------------CCCC--
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ--------E------------------SNFP-- 228 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~--------~------------------~~~~-- 228 (334)
.+|.=||+|. | .++..++..|. +|+.+|.+++.++.+.+.+.. . ....
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 4788889886 3 34556666776 999999999988877764210 0 0111
Q ss_pred CCCceEEEeCccccCCCC----HHHHHHHHHHcccCCcEEE
Q 019861 229 KDSIDAVHAGAAIHCWSS----PSTGVAEISRVLRPGGVFV 265 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d----~~~~L~~i~r~LkpgG~li 265 (334)
-...|+|+.. +++ ...+++++...++|+..++
T Consensus 83 ~~~aDlVi~a-----v~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 VKDADLVIEA-----VPESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp TTTCSEEEEC-----CCSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred hccCCEEEEe-----ccCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 1346777654 343 2467888888998887654
No 438
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=69.13 E-value=1.6 Score=35.13 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=21.2
Q ss_pred ceeCCCCCCC---ccccCCCCcccccccCCccccccccccccc
Q 019861 71 VLACPICYKP---LTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 71 ~l~CPiC~~~---l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
...||.|++. +.... ..+...|.+||.+...
T Consensus 21 ~~~CPECGs~~t~IV~D~---------erGE~VCsdCGLVLEE 54 (197)
T 3k1f_M 21 VLTCPECKVYPPKIVERF---------SEGDVVCALCGLVLSD 54 (197)
T ss_dssp CCCCTTTCCSSCCEEEEG---------GGTEEEETTTCBBCCC
T ss_pred CeECcCCCCcCCeEEEeC---------CCCEEEEcCCCCCcCC
Confidence 3579999983 22211 3368999999987643
No 439
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=68.13 E-value=5.7 Score=36.33 Aligned_cols=89 Identities=18% Similarity=0.166 Sum_probs=54.5
Q ss_pred CCCcEEEECCCc-CHHHHH-HHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC--------------------------CC
Q 019861 177 LGGNIIDASCGS-GLFSRI-FAKSGLFSLVVALDYSENMLKQCYEFVQQESN--------------------------FP 228 (334)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~-l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--------------------------~~ 228 (334)
++.+|+=+|+|. |..... +...|. +|+++|.++..++.+.+.-..... +.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 568999999986 444333 334454 999999999877776652000000 00
Q ss_pred --CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 229 --KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 229 --~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
-...|+|+..-.+..-+.|.-+-+++.+.+|||++++-.
T Consensus 261 e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 261 DAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 146899997643322223333346888899998876653
No 440
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=67.55 E-value=2.3 Score=38.74 Aligned_cols=91 Identities=15% Similarity=0.205 Sum_probs=51.5
Q ss_pred CCCCcEEEECCCc-CHHH-HHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----C---CC--CCCceEEEeCccccC
Q 019861 176 VLGGNIIDASCGS-GLFS-RIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----N---FP--KDSIDAVHAGAAIHC 243 (334)
Q Consensus 176 ~~~~~vLDiGcG~-G~~~-~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~---~~--~~~fD~V~~~~vl~h 243 (334)
.++.+|+=+|+|. |... ..+...|. +|+++|.++..++.+.+.+.... . +. -..+|+|+..-....
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 3468999999853 3332 23333454 99999999987776655332110 0 00 024788887544322
Q ss_pred CCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 244 WSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 244 ~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
...+..+.++..+.|++||+++...
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC
T ss_pred cccchhHHHHHHHhhcCCCEEEEEe
Confidence 1111223567778899999877543
No 441
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=67.20 E-value=12 Score=26.33 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHccc-CCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEEEe-ecCc
Q 019861 245 SSPSTGVAEISRVLR-PGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT-RNRG 322 (334)
Q Consensus 245 ~d~~~~L~~i~r~Lk-pgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~~~-~~g~ 322 (334)
|-|.-..++..+-|+ +|+.|.+..-+. -+.+++..++++.|+++.... ..|.
T Consensus 12 P~Pvl~~kkal~~l~~~G~~L~V~~dd~--------------------------~a~~dI~~~~~~~G~~v~~~~~~~g~ 65 (87)
T 3hz7_A 12 PIPVIRAKKALAELGEAGGVVTVLVDND--------------------------ISRQNLQKMAEGMGYQSEYLEKDNGV 65 (87)
T ss_dssp THHHHHHHHHHHTTGGGCCEEEEEESSH--------------------------HHHHHHHHHHHHHTCEEEEEECGGGC
T ss_pred CHHHHHHHHHHHhccCCCCEEEEEECCc--------------------------cHHHHHHHHHHHCCCEEEEEEecCCE
Confidence 345444566666776 888877755432 146689999999999988766 4455
Q ss_pred EEEEEEEcC
Q 019861 323 FVMFTATKP 331 (334)
Q Consensus 323 ~~~~~a~K~ 331 (334)
|.+.+ +|.
T Consensus 66 ~~i~I-~Kg 73 (87)
T 3hz7_A 66 IEVTI-VAG 73 (87)
T ss_dssp EEEEE-ESC
T ss_pred EEEEE-EEC
Confidence 54444 654
No 442
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=66.27 E-value=13 Score=33.59 Aligned_cols=85 Identities=11% Similarity=0.063 Sum_probs=55.0
Q ss_pred CCCCcEEEECCC--cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC------CC-------CCCCCceEEEeCcc
Q 019861 176 VLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN-------FPKDSIDAVHAGAA 240 (334)
Q Consensus 176 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~------~~-------~~~~~fD~V~~~~v 240 (334)
.++.+||=+|++ .|.++..+++.. ..+++++. ++.-++.+++.-... .. ..++.+|+|+-.-
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~- 239 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCI- 239 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESS-
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECC-
Confidence 568899999983 577777777763 34888885 787777776531110 00 1123488887543
Q ss_pred ccCCCCHHHHHHHHHHcc-cCCcEEEEEE
Q 019861 241 IHCWSSPSTGVAEISRVL-RPGGVFVGTT 268 (334)
Q Consensus 241 l~h~~d~~~~L~~i~r~L-kpgG~lii~~ 268 (334)
..+ ..+....+.| ++||+++...
T Consensus 240 ----g~~-~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 240 ----TNV-ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ----CSH-HHHHHHHHHSCTTCEEEEESS
T ss_pred ----Cch-HHHHHHHHHhhcCCCEEEEEe
Confidence 333 3477788888 6999988753
No 443
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=65.98 E-value=4.8 Score=36.73 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=54.1
Q ss_pred CCCCcEEEECCCc-CHHHHHHH-HcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------CCC--CCCceEEEeCccccC
Q 019861 176 VLGGNIIDASCGS-GLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQES--------NFP--KDSIDAVHAGAAIHC 243 (334)
Q Consensus 176 ~~~~~vLDiGcG~-G~~~~~l~-~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------~~~--~~~fD~V~~~~vl~h 243 (334)
.++.+|+=+|+|. |.....++ ..|. +|+++|.++..++.+++.+.... .+. -...|+|+..-....
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~ 243 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPG 243 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCC
Confidence 4578999999964 33333333 3344 99999999988777765432210 000 024799987532221
Q ss_pred CCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 244 WSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 244 ~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
...+..+.++..+.|+|||+++...
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcceecHHHHhcCCCCcEEEEEe
Confidence 1222223456778899999877644
No 444
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=65.88 E-value=3.2 Score=29.06 Aligned_cols=41 Identities=12% Similarity=0.274 Sum_probs=28.7
Q ss_pred cccCCCceeCCCCCCCccccCCCCcccccccCCcccccccccccccccC
Q 019861 65 ASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (334)
Q Consensus 65 ~~~~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~ 113 (334)
..+......||-|+......+. ....+.|..|+.+...+-|
T Consensus 30 PnS~Fm~VkCp~C~~~~~VFSh--------A~t~V~C~~CgtvL~~PTG 70 (86)
T 3iz6_X 30 PNSFFMDVKCQGCFNITTVFSH--------SQTVVVCPGCQTVLCQPTG 70 (86)
T ss_dssp ---CEEEEECTTTCCEEEEETT--------CSSCCCCSSSCCCCSCCCS
T ss_pred CCCcEeEEECCCCCCeeEEEec--------CCcEEEccCCCCEeecCCC
Confidence 4555667889999996655543 3468999999998877644
No 445
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=65.17 E-value=5.9 Score=35.84 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=55.3
Q ss_pred CCCcEEEECCCc-CHHHHHH-HHcCCCCeEEEEeCCHHHHHHHHHHHhcCC--------CCC--CCCceEEEeCccccCC
Q 019861 177 LGGNIIDASCGS-GLFSRIF-AKSGLFSLVVALDYSENMLKQCYEFVQQES--------NFP--KDSIDAVHAGAAIHCW 244 (334)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l-~~~~~~~~v~giD~s~~~~~~a~~~~~~~~--------~~~--~~~fD~V~~~~vl~h~ 244 (334)
++.+||=+|+|. |.....+ ...|. +|+++|.++..++.+++...... .+. -..+|+|+..-.....
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~ 243 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGR 243 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCC
Confidence 357999999964 3333333 33454 99999999988887776543221 000 0258999876544332
Q ss_pred CCHHHHHHHHHHcccCCcEEEEEEe
Q 019861 245 SSPSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 245 ~d~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
..|..+.++..+.|++||+++-...
T Consensus 244 ~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 244 RAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp SCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCeecCHHHHhhCCCCCEEEEEec
Confidence 2222224556678999998776443
No 446
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=64.64 E-value=3.1 Score=29.17 Aligned_cols=46 Identities=20% Similarity=0.447 Sum_probs=26.7
Q ss_pred cCCCceeCCCCCCCccccCCCCccccc-ccCCccccccccccccccc
Q 019861 67 TSKNVLACPICYKPLTWIGDSSLSIES-AAGSSLQCNTCKKTYSGVG 112 (334)
Q Consensus 67 ~~~~~l~CPiC~~~l~~~~~~~~~~~~-~~~~~~~C~~C~~~~~~~~ 112 (334)
.+.....|++|+........-...... .....+.|+.|+..|....
T Consensus 24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~ 70 (85)
T 2lv2_A 24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSP 70 (85)
T ss_dssp CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHH
T ss_pred CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHH
Confidence 344568999999965332100000000 1345689999999886653
No 447
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=64.59 E-value=27 Score=30.20 Aligned_cols=92 Identities=15% Similarity=0.090 Sum_probs=60.8
Q ss_pred CCCCcEEEECCCcC---HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----CCC---------------CCCc
Q 019861 176 VLGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----NFP---------------KDSI 232 (334)
Q Consensus 176 ~~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~~~---------------~~~f 232 (334)
..++.+|=-|.+.| ..+..|++.|. +|+.+|.+++.++.+.+.+.... ... -+..
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 34778888898877 35666777776 99999999998887766654321 111 2578
Q ss_pred eEEEeCccccCCCC-------------------HHHHHHHHHHcccCCcEEEEEEe
Q 019861 233 DAVHAGAAIHCWSS-------------------PSTGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 233 D~V~~~~vl~h~~d-------------------~~~~L~~i~r~LkpgG~lii~~~ 269 (334)
|+++.+........ +....+.+...|+.+|.++...-
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 99998765433211 12345677778888887766543
No 448
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=64.31 E-value=26 Score=30.06 Aligned_cols=81 Identities=15% Similarity=0.155 Sum_probs=49.6
Q ss_pred CcEEEECC-Cc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-CCCC--CCCceEEEeCccccCCCCHHHHHH
Q 019861 179 GNIIDASC-GS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFP--KDSIDAVHAGAAIHCWSSPSTGVA 252 (334)
Q Consensus 179 ~~vLDiGc-G~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~--~~~fD~V~~~~vl~h~~d~~~~L~ 252 (334)
.+|.=||+ |. | .++..+...+. +|+++|.++..++.+.+. .-. .... -...|+|+..---.. ...+++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~-g~~~~~~~~~~~~aDvVi~av~~~~---~~~v~~ 85 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEGRDRLQGM-GIPLTDGDGWIDEADVVVLALPDNI---IEKVAE 85 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHHHHHHHHT-TCCCCCSSGGGGTCSEEEECSCHHH---HHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHhc-CCCcCCHHHHhcCCCEEEEcCCchH---HHHHHH
Confidence 47999999 85 3 34566666665 899999998877766541 100 0111 135788876532211 245667
Q ss_pred HHHHcccCCcEEE
Q 019861 253 EISRVLRPGGVFV 265 (334)
Q Consensus 253 ~i~r~LkpgG~li 265 (334)
++...|++|..++
T Consensus 86 ~l~~~l~~~~ivv 98 (286)
T 3c24_A 86 DIVPRVRPGTIVL 98 (286)
T ss_dssp HHGGGSCTTCEEE
T ss_pred HHHHhCCCCCEEE
Confidence 7777777766444
No 449
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=63.85 E-value=2.6 Score=34.02 Aligned_cols=29 Identities=21% Similarity=0.373 Sum_probs=21.7
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKT 107 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~ 107 (334)
.--.+||.|+..+.... .+.++|+.|+..
T Consensus 40 ~~Y~ACp~CnKKV~~~~----------~g~~~CekC~~~ 68 (172)
T 3u50_C 40 LYYYRCTCQGKSVLKYH----------GDSFFCESCQQF 68 (172)
T ss_dssp CEEEECTTSCCCEEEET----------TTEEEETTTTEE
T ss_pred EEehhchhhCCEeeeCC----------CCeEECCCCCCC
Confidence 34567999999875322 268999999988
No 450
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.70 E-value=16 Score=31.21 Aligned_cols=81 Identities=10% Similarity=0.139 Sum_probs=49.0
Q ss_pred cEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---CCCCCC-CCceEEEeCccccCCCCHHHHHHH
Q 019861 180 NIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFPK-DSIDAVHAGAAIHCWSSPSTGVAE 253 (334)
Q Consensus 180 ~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~~-~~fD~V~~~~vl~h~~d~~~~L~~ 253 (334)
+|.=||+|. | .++..+.+.+. +|+++|.++..++.+.+.-.. .....+ ...|+|+..---. ....++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~vi~av~~~---~~~~~~~~ 76 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQ---LILPTLEK 76 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCHH---HHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHhCCCCccccCCHHHhCCCCEEEEECCHH---HHHHHHHH
Confidence 577789876 3 34555666665 899999999877766532110 000100 4578887653211 12456778
Q ss_pred HHHcccCCcEEE
Q 019861 254 ISRVLRPGGVFV 265 (334)
Q Consensus 254 i~r~LkpgG~li 265 (334)
+...+++|..++
T Consensus 77 l~~~~~~~~~vv 88 (279)
T 2f1k_A 77 LIPHLSPTAIVT 88 (279)
T ss_dssp HGGGSCTTCEEE
T ss_pred HHhhCCCCCEEE
Confidence 888888876543
No 451
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=63.68 E-value=2.3 Score=37.87 Aligned_cols=40 Identities=13% Similarity=0.323 Sum_probs=23.7
Q ss_pred CCceeCCCCCCCccccCC-CCcccccccCCccccccccccc
Q 019861 69 KNVLACPICYKPLTWIGD-SSLSIESAAGSSLQCNTCKKTY 108 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~-~~~~~~~~~~~~~~C~~C~~~~ 108 (334)
...+.||.|+........ +.-+-+.....++.|..||+.|
T Consensus 266 ~~~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~w 306 (309)
T 1pqv_S 266 TDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306 (309)
T ss_pred cccccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCce
Confidence 346899999995432211 1111112244579999999876
No 452
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=63.42 E-value=36 Score=29.25 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=52.7
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC--------------C--CCCC--CCceEEEeC
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE--------------S--NFPK--DSIDAVHAG 238 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~--------------~--~~~~--~~fD~V~~~ 238 (334)
.+|.=||+|. | .++..|.+.+. +|+++|.++..++..++.-... . ...+ ...|+|+..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN--DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 4788999985 3 34556666676 8999999998777766541000 0 0111 157888875
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
---. ....+++++...|+++..++..
T Consensus 82 v~~~---~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 82 TKAQ---QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp SCHH---HHHHHHHHHGGGCCTTCEEEEC
T ss_pred eccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 4211 2356778888888887765543
No 453
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=63.04 E-value=27 Score=29.40 Aligned_cols=91 Identities=21% Similarity=0.222 Sum_probs=57.5
Q ss_pred CCCcEEEECCCcC---HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-----CCC---------------CCCce
Q 019861 177 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----NFP---------------KDSID 233 (334)
Q Consensus 177 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-----~~~---------------~~~fD 233 (334)
.++++|=.|++.| .....|++.|. +|+.+|.++..++...+.+.... .+. -+..|
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678998888766 24556666776 99999999887776665543211 111 14789
Q ss_pred EEEeCccccCCC-----CH--------------HHHHHHHHHcccCCcEEEEEEe
Q 019861 234 AVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 234 ~V~~~~vl~h~~-----d~--------------~~~L~~i~r~LkpgG~lii~~~ 269 (334)
+++.+..+.... ++ ..+++.+...|+.+|.++...-
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 999876543321 11 1245666677777888776544
No 454
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=62.92 E-value=4.8 Score=24.74 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=18.1
Q ss_pred ceeCCCCCCCcccc-CC-CCcccccccCCccccccccc
Q 019861 71 VLACPICYKPLTWI-GD-SSLSIESAAGSSLQCNTCKK 106 (334)
Q Consensus 71 ~l~CPiC~~~l~~~-~~-~~~~~~~~~~~~~~C~~C~~ 106 (334)
...|++||.-.... +. ..+. ..-..++|+.||.
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~---~lP~dw~CP~Cg~ 38 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFD---QLPDDWCCPVCGV 38 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGG---GSCTTCBCTTTCC
T ss_pred EEECCCCCeEEeCCcCCCcchh---hCCCCCcCcCCCC
Confidence 47899999743321 11 0010 1123589999985
No 455
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=62.48 E-value=1.8 Score=27.98 Aligned_cols=41 Identities=15% Similarity=0.410 Sum_probs=24.8
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 112 (334)
..+.|+.|+........ +...-.....+.|+.|+..+....
T Consensus 13 k~~~C~~C~k~F~~~~~--l~~~H~~~k~~~C~~C~k~f~~~~ 53 (62)
T 1vd4_A 13 ASFKCPVCSSTFTDLEA--NQLFDPMTGTFRCTFCHTEVEEDE 53 (62)
T ss_dssp SEEECSSSCCEEEHHHH--HHHEETTTTEEBCSSSCCBCEECT
T ss_pred CCccCCCCCchhccHHH--hHhhcCCCCCEECCCCCCccccCc
Confidence 45899999986432210 111111335689999998886553
No 456
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=62.37 E-value=1.2 Score=34.07 Aligned_cols=39 Identities=18% Similarity=0.356 Sum_probs=21.7
Q ss_pred eCCCCCCCccccCCCCc----ccc--ccc-CCcccccccccccccc
Q 019861 73 ACPICYKPLTWIGDSSL----SIE--SAA-GSSLQCNTCKKTYSGV 111 (334)
Q Consensus 73 ~CPiC~~~l~~~~~~~~----~~~--~~~-~~~~~C~~C~~~~~~~ 111 (334)
.||+|+........... ... ... ...+.|+.||..+..+
T Consensus 4 ~Cp~Cg~~~~~~~~~~~~~~~kg~~~~v~~v~~~~C~~CGE~~~d~ 49 (133)
T 3o9x_A 4 KCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNK 49 (133)
T ss_dssp BCTTTSSSBEEEEEEEEEEEETTEEEEEEEEEEEEESSSSCEECCH
T ss_pred CCCcCCCCceeeceEEEEEEECCEEEEECCCceeECCCCCCEeecH
Confidence 69999985212111111 111 113 2689999999877554
No 457
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=62.21 E-value=4.1 Score=30.36 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=25.3
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCccccccccccccccc
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 112 (334)
+.=||.||+-|....... .....+.|..|+..+....
T Consensus 4 m~FCp~Cgn~L~~~~~~~-----~~~~~~~C~~C~y~~~~~~ 40 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKV-----DRVLRLACRNCDYSEIAAT 40 (113)
T ss_dssp CCCCSSSCCCCEECCCTT-----TCCCCEECSSSCCEECCSC
T ss_pred ceeCcCCCCEeeEcccCC-----CCeeEEECCCCCCeEEcCC
Confidence 455999999886654211 1224799999998886654
No 458
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=61.55 E-value=3.2 Score=27.49 Aligned_cols=43 Identities=14% Similarity=0.423 Sum_probs=24.7
Q ss_pred CCceeCCCCCCCccccCCCCcccc-cccCCcccccccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIE-SAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~-~~~~~~~~C~~C~~~~~~~ 111 (334)
...+.|+.|+........-..... -.....+.|..|+..|...
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~ 58 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRP 58 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCH
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCH
Confidence 456899999986533210000000 0133468999999887654
No 459
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=61.23 E-value=21 Score=31.55 Aligned_cols=84 Identities=17% Similarity=0.164 Sum_probs=52.9
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc----C------------CCCC--CCCceEEEeC
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ----E------------SNFP--KDSIDAVHAG 238 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~----~------------~~~~--~~~fD~V~~~ 238 (334)
.+|.=||+|. | .++..|++.+. +|+++|.++..++..++.... . .... -..+|+|+..
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 5799999986 3 34556666665 899999998887776654210 0 0000 1357877765
Q ss_pred ccccCCCCHHHHHHHHHHcccCCcEEEEE
Q 019861 239 AAIHCWSSPSTGVAEISRVLRPGGVFVGT 267 (334)
Q Consensus 239 ~vl~h~~d~~~~L~~i~r~LkpgG~lii~ 267 (334)
---.. ...+++++...|++|..++..
T Consensus 83 v~~~~---~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 83 VPAIH---HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp SCGGG---HHHHHHHHGGGCCTTCEEEES
T ss_pred CCchH---HHHHHHHHHHhCCCCCEEEEc
Confidence 32221 256788888889887755543
No 460
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=61.00 E-value=26 Score=30.06 Aligned_cols=84 Identities=13% Similarity=0.090 Sum_probs=50.1
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---CCCCC--CCCceEEEeCccccCCCCHHHHH
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFP--KDSIDAVHAGAAIHCWSSPSTGV 251 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~--~~~fD~V~~~~vl~h~~d~~~~L 251 (334)
.+|.=||+|. | .++..+...+...+|+++|.++..++.+.+.-.. ..... -...|+|+..---.. ...++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~---~~~v~ 83 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK---TIDFI 83 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH---HHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH---HHHHH
Confidence 5788999886 3 3455666664334899999998877766542110 01111 135688876532211 14567
Q ss_pred HHHHHc-ccCCcEEE
Q 019861 252 AEISRV-LRPGGVFV 265 (334)
Q Consensus 252 ~~i~r~-LkpgG~li 265 (334)
+++... |+++..++
T Consensus 84 ~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 84 KILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHTSCCCTTCEEE
T ss_pred HHHHhcCCCCCCEEE
Confidence 777777 77765444
No 461
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=60.94 E-value=17 Score=26.10 Aligned_cols=68 Identities=15% Similarity=0.092 Sum_probs=43.3
Q ss_pred ceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCC
Q 019861 232 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 311 (334)
Q Consensus 232 fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~G 311 (334)
.|.++-.-.+.+ |-|.-.+++..+-|++|..|.+..-+.. ..+++.+++++.|
T Consensus 26 ~~~~LD~rGl~C-P~PvlktkkaL~~l~~Ge~L~Vl~dd~~--------------------------a~~dIp~~~~~~G 78 (97)
T 1je3_A 26 PDYRLDMVGEPC-PYPAVATLEAMPQLKKGEILEVVSDCPQ--------------------------SINNIPLDARNHG 78 (97)
T ss_dssp EEEEECSBCCSS-SSSTHHHHHHTTTCCSSCEEEEEEBCSS--------------------------SSCHHHHHHHHHT
T ss_pred cCeEEeCCCCCC-CHHHHHHHHHHHcCCCCCEEEEEECCcc--------------------------hHHHHHHHHHHCC
Confidence 455554444444 5565556667777889988777554421 3457889999999
Q ss_pred CcEEEEe-ecCcEEEE
Q 019861 312 LVDFKCT-RNRGFVMF 326 (334)
Q Consensus 312 f~~v~~~-~~g~~~~~ 326 (334)
++++... ..+.|.++
T Consensus 79 ~~v~~~e~~~~~~~i~ 94 (97)
T 1je3_A 79 YTVLDIQQDGPTIRYL 94 (97)
T ss_dssp CSEEEEEECSSSEEEE
T ss_pred CEEEEEEeeCCEEEEE
Confidence 9988744 34444443
No 462
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=60.30 E-value=4 Score=27.11 Aligned_cols=33 Identities=24% Similarity=0.570 Sum_probs=20.5
Q ss_pred cCCCceeCCCCCCCccccCCCCcccccccCCccccc-cccccccc
Q 019861 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCN-TCKKTYSG 110 (334)
Q Consensus 67 ~~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~-~C~~~~~~ 110 (334)
++.+...|++|+.+..... ...+|. .|..-|..
T Consensus 4 ~~~~~~~C~~C~~p~~~~~-----------~mI~CD~~C~~WfH~ 37 (65)
T 2vpb_A 4 SSDPVYPCGICTNEVNDDQ-----------DAILCEASCQKWFHR 37 (65)
T ss_dssp -----CBCTTTCSBCCTTS-----------CEEEBTTTTCCEEEH
T ss_pred CCCCcCcCccCCCccCCCC-----------CeEecccCccccCch
Confidence 4456678999999854322 578999 89765543
No 463
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=59.51 E-value=2.9 Score=27.12 Aligned_cols=42 Identities=17% Similarity=0.248 Sum_probs=25.1
Q ss_pred CceeCCCCCCCccccCCCCcccc-cccCCcccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIE-SAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~-~~~~~~~~C~~C~~~~~~~ 111 (334)
..+.|+.|+........-..... -....-+.|+.|+..|...
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~ 45 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQ 45 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSH
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCH
Confidence 45899999996533220000000 0144679999999988665
No 464
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=59.49 E-value=11 Score=33.29 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=70.9
Q ss_pred CcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC------CC---CCCCceEEEeCc-----cc---
Q 019861 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NF---PKDSIDAVHAGA-----AI--- 241 (334)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~------~~---~~~~fD~V~~~~-----vl--- 241 (334)
.+|||+=||.|.+...+..+|. ..+.++|+++.+.+.-+.++.... .+ .-..+|+++... +.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag~ 79 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNHSAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGGS 79 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHCCSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETTE
T ss_pred CeEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHCCCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCCC
Confidence 3799999999999999999985 456799999998888877754221 11 113589888642 11
Q ss_pred -cCCCCHH-HHHH---HHHHcccCCcEEEEEEeccCCCCCchHHHHHHHHHhhhhcCccCCCCHHHHHHHHHhCCCcEEE
Q 019861 242 -HCWSSPS-TGVA---EISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 316 (334)
Q Consensus 242 -~h~~d~~-~~L~---~i~r~LkpgG~lii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~l~~ll~~~Gf~~v~ 316 (334)
..+.|+. .++. ++.+.++|. +++.+.... . .. +...-..+.+.+.|++.|+.+..
T Consensus 80 ~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~g-l---~~--------------~~~~~~~~~i~~~l~~~GY~v~~ 139 (331)
T 3ubt_Y 80 LRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKG-M---MA--------------QRHNKAVQEFIQEFDNAGYDVHI 139 (331)
T ss_dssp ECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCG-G---GG--------------CTTSHHHHHHHHHHHHHTEEEEE
T ss_pred ccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecc-c---cc--------------ccccchhhhhhhhhccCCcEEEE
Confidence 2234553 2333 344556785 334343321 0 00 11111345677888899997654
No 465
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=59.43 E-value=3.7 Score=33.36 Aligned_cols=33 Identities=21% Similarity=0.520 Sum_probs=23.9
Q ss_pred CceeCCC--CCCCccccCCCCcccccccCCccccccccccccccc
Q 019861 70 NVLACPI--CYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (334)
Q Consensus 70 ~~l~CPi--C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 112 (334)
--.+||. |+..+.... .+.++|+.|+..++.+.
T Consensus 42 ~Y~aC~~~~CnKKv~~~~----------~g~~~CekC~~~~~~~~ 76 (181)
T 1l1o_C 42 MYQACPTQDCNKKVIDQQ----------NGLYRCEKCDTEFPNFK 76 (181)
T ss_dssp EEEBCCSTTCCCBCEEET----------TTEEEETTTTEEESSCC
T ss_pred EECCCCchhcCCccccCC----------CCeEECCCCCCcCCCce
Confidence 3557999 999765432 25799999998876553
No 466
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=59.37 E-value=28 Score=32.59 Aligned_cols=82 Identities=21% Similarity=0.263 Sum_probs=52.1
Q ss_pred CCcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-------------C----------CCCC-CCC
Q 019861 178 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-------------E----------SNFP-KDS 231 (334)
Q Consensus 178 ~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-------------~----------~~~~-~~~ 231 (334)
-.+|.-||+|. | .++..++..|. .|+++|.++..++.+++.... . .... -..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELST 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHCC
Confidence 35799999997 3 35566666676 899999999888776653210 0 0000 123
Q ss_pred ceEEEeCccccCCC-CH---HHHHHHHHHcccCCcEEEE
Q 019861 232 IDAVHAGAAIHCWS-SP---STGVAEISRVLRPGGVFVG 266 (334)
Q Consensus 232 fD~V~~~~vl~h~~-d~---~~~L~~i~r~LkpgG~lii 266 (334)
.|+|+.. ++ +. ..+++++...++||.+++.
T Consensus 115 aDlVIea-----Vpe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 115 VDLVVEA-----VFEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp CSEEEEC-----CCSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCEEEEc-----CCCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 5666654 33 32 4677888888988876553
No 467
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=59.15 E-value=5.4 Score=30.11 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=24.2
Q ss_pred ceeCCCCCCCccccCCC-CcccccccCCcccccccccccccc
Q 019861 71 VLACPICYKPLTWIGDS-SLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~-~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
...||-||......... .-+.......++.|.+|++.+...
T Consensus 72 ~~~Cp~C~~~~a~~~q~q~rsade~~t~fy~C~~C~~~w~~n 113 (122)
T 1twf_I 72 DRECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSD 113 (122)
T ss_dssp CCCCTTTCCCCEEEEECSSCCTTCCCCEEEEETTTCCEEECC
T ss_pred CCCCCCCCCCEEEEEEecCccCCCCceEEEEeCCCCCEeccC
Confidence 47899999964322111 111112244579999999987543
No 468
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=59.06 E-value=8.4 Score=26.78 Aligned_cols=38 Identities=11% Similarity=0.177 Sum_probs=20.2
Q ss_pred CCceeCCCCCCCccccC-C--CCcccc---cccCCccccccccc
Q 019861 69 KNVLACPICYKPLTWIG-D--SSLSIE---SAAGSSLQCNTCKK 106 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~-~--~~~~~~---~~~~~~~~C~~C~~ 106 (334)
.....|++||.-..... . ..+.-+ ...-..|+|+.|+.
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 68 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA 68 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 35799999998432210 0 001100 00124689999986
No 469
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=58.70 E-value=40 Score=30.29 Aligned_cols=83 Identities=13% Similarity=0.058 Sum_probs=51.7
Q ss_pred CCcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-CCCC-----CCCceEEEeCccccCCCCHHH
Q 019861 178 GGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFP-----KDSIDAVHAGAAIHCWSSPST 249 (334)
Q Consensus 178 ~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-~~~~-----~~~fD~V~~~~vl~h~~d~~~ 249 (334)
..+|.=||+|. | .++..|++.+. .|+++|.++..++.+.+.-... .... ....|+|+..---. ....
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~--~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~---~v~~ 96 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH--ECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA---VVDS 96 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG---GHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH---HHHH
Confidence 46899999885 3 34666677776 9999999998776655320000 0000 12348887653222 3456
Q ss_pred HHHHHHHcccCCcEEE
Q 019861 250 GVAEISRVLRPGGVFV 265 (334)
Q Consensus 250 ~L~~i~r~LkpgG~li 265 (334)
++.++...|++|..++
T Consensus 97 vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 97 MLQRMTPLLAANDIVI 112 (358)
T ss_dssp HHHHHGGGCCTTCEEE
T ss_pred HHHHHHhhCCCCCEEE
Confidence 7788888888876554
No 470
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=58.52 E-value=4.7 Score=36.33 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=21.6
Q ss_pred ceeCCCCCCC---ccccCCCCcccccccCCccccccccccccc
Q 019861 71 VLACPICYKP---LTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 71 ~l~CPiC~~~---l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
...||.|+.. +.... ..+...|..||.+.-.
T Consensus 21 ~~~Cp~Cg~~~~~iv~D~---------~~G~~vC~~CG~Vl~e 54 (345)
T 3k7a_M 21 VLTCPECKVYPPKIVERF---------SEGDVVCALCGLVLSD 54 (345)
T ss_dssp CCCCSTTCCSCCCCCCCS---------SSCSCCCSSSCCCCCC
T ss_pred CCcCcCCCCCCCceEEEC---------CCCCEecCCCCeEccc
Confidence 4579999995 22221 3368999999998743
No 471
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=58.46 E-value=65 Score=27.40 Aligned_cols=64 Identities=11% Similarity=0.156 Sum_probs=42.0
Q ss_pred CCCcEEEECCCcC---HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC---------CCCC---------------
Q 019861 177 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---------NFPK--------------- 229 (334)
Q Consensus 177 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~---------~~~~--------------- 229 (334)
.+++||=.|++.| .++..|++.|. +|+.++.+....+.+.+.+.... .+.+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3567888887655 34555666676 99999999887776665554321 1222
Q ss_pred -CCceEEEeCcccc
Q 019861 230 -DSIDAVHAGAAIH 242 (334)
Q Consensus 230 -~~fD~V~~~~vl~ 242 (334)
+.+|+++.+..+-
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 3799999987653
No 472
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=58.26 E-value=10 Score=34.54 Aligned_cols=90 Identities=19% Similarity=0.128 Sum_probs=52.1
Q ss_pred CCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC-----------------------------
Q 019861 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----------------------------- 226 (334)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~----------------------------- 226 (334)
++.+|+=+|+|. |.....++... ..+|+++|.++...+.+++ +.....
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~-~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES-LGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH-TTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH-cCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 578999999986 44444444332 2489999999876666554 221000
Q ss_pred --CC--CCCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 227 --FP--KDSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 227 --~~--~~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+. -...|+|+..-...-.+.|..+.++..+.|+|||+++-..
T Consensus 249 ~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 10 1247999854422111122222356777899999877654
No 473
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=57.88 E-value=32 Score=29.30 Aligned_cols=84 Identities=15% Similarity=0.254 Sum_probs=49.5
Q ss_pred cEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc---CCCCC--CC-CceEEEeCccccCCCCHHHHH
Q 019861 180 NIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFP--KD-SIDAVHAGAAIHCWSSPSTGV 251 (334)
Q Consensus 180 ~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~---~~~~~--~~-~fD~V~~~~vl~h~~d~~~~L 251 (334)
+|.=||+|. | .++..+...+...+|+++|.++..++.+++.-.. ..... -. ..|+|+..--.. ....++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~---~~~~v~ 79 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR---TFREIA 79 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH---HHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH---HHHHHH
Confidence 678899886 3 3445555555334799999999887766542110 00111 12 567777653211 123567
Q ss_pred HHHHHcccCCcEEEE
Q 019861 252 AEISRVLRPGGVFVG 266 (334)
Q Consensus 252 ~~i~r~LkpgG~lii 266 (334)
.++...|+++..++.
T Consensus 80 ~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 80 KKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHSCTTCEEEE
T ss_pred HHHHhhCCCCcEEEE
Confidence 788888888875443
No 474
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=57.76 E-value=2.5 Score=24.52 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=20.9
Q ss_pred eCCCCCCCccccCCCCcccccccCCccccccccccccc
Q 019861 73 ACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (334)
Q Consensus 73 ~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (334)
.||.|+++....... ...-.++|..||...+.
T Consensus 2 lC~~C~~peT~l~~~------~~~~~l~C~aCG~~~~v 33 (36)
T 1k81_A 2 ICRECGKPDTKIIKE------GRVHLLKCMACGAIRPI 33 (36)
T ss_dssp CCSSSCSCEEEEEEE------TTEEEEEEETTTEEEEE
T ss_pred CCcCCCCCCcEEEEe------CCcEEEEhhcCCCcccc
Confidence 599999975443210 12246899999986543
No 475
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=57.59 E-value=4.5 Score=30.33 Aligned_cols=29 Identities=21% Similarity=0.389 Sum_probs=20.6
Q ss_pred CCceeCCCCCCCccccCCCCcccccccCCcc-ccccccccc
Q 019861 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSL-QCNTCKKTY 108 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~-~C~~C~~~~ 108 (334)
.....|+.||....... ... .||.||+..
T Consensus 71 p~~~~C~~CG~~~e~~~-----------~~~~~CP~Cgs~~ 100 (119)
T 2kdx_A 71 KVELECKDCSHVFKPNA-----------LDYGVCEKCHSKN 100 (119)
T ss_dssp CCEEECSSSSCEECSCC-----------STTCCCSSSSSCC
T ss_pred cceEEcCCCCCEEeCCC-----------CCCCcCccccCCC
Confidence 34688999999654422 356 899999764
No 476
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=57.27 E-value=25 Score=29.71 Aligned_cols=83 Identities=12% Similarity=0.113 Sum_probs=50.0
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCe-EEEEeCCHHHHHHHHHHHhcC--CCCC--CCCceEEEeCccccCCCCHHHHH
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQE--SNFP--KDSIDAVHAGAAIHCWSSPSTGV 251 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~-v~giD~s~~~~~~a~~~~~~~--~~~~--~~~fD~V~~~~vl~h~~d~~~~L 251 (334)
.+|.=||+|. | .++..+...+. + +.++|.++...+...+.+.-. .... -...|+|+..---.. ...++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~--~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~---~~~v~ 85 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGF--RIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA---FAELL 85 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTC--CEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH---HHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH---HHHHH
Confidence 5799999985 3 34555666664 5 889999998877766543210 1111 135788886542211 14566
Q ss_pred HHHHHcccCCcEEEE
Q 019861 252 AEISRVLRPGGVFVG 266 (334)
Q Consensus 252 ~~i~r~LkpgG~lii 266 (334)
+++...+++|..++-
T Consensus 86 ~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 86 QGIVEGKREEALMVH 100 (266)
T ss_dssp HHHHTTCCTTCEEEE
T ss_pred HHHHhhcCCCcEEEE
Confidence 777777777665443
No 477
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=56.89 E-value=17 Score=24.66 Aligned_cols=31 Identities=19% Similarity=0.562 Sum_probs=21.8
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTH 114 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~ 114 (334)
..-.|-.|+..+... -+.|. |+..|-..--|
T Consensus 24 ~~nRC~~CrKkvgL~-------------gf~Cr-Cg~~FCs~HRy 54 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLT-------------GFDCR-CGNLFCGLHRY 54 (74)
T ss_dssp CTTBCSSSCCBCGGG-------------CEECT-TSCEECSSSCS
T ss_pred cCCcChhhCCccccc-------------CeecC-CCCEechhcCC
Confidence 446899999975543 27888 99887665444
No 478
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=56.79 E-value=6.4 Score=30.23 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=24.1
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCccccccccccccccc
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 112 (334)
+.=||.|++-|....... .....+.|..|+.......
T Consensus 24 ~~FCPeCgNmL~pked~~-----~~~l~~~CrtCgY~~~~~~ 60 (133)
T 3qt1_I 24 FRFCRDCNNMLYPREDKE-----NNRLLFECRTCSYVEEAGS 60 (133)
T ss_dssp CCBCTTTCCBCBCCBCTT-----TCCBCCBCSSSCCBCCCSC
T ss_pred CeeCCCCCCEeeECccCC-----CceeEEECCCCCCcEEcCC
Confidence 445999999876543110 0124799999998775543
No 479
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=56.60 E-value=77 Score=27.16 Aligned_cols=93 Identities=10% Similarity=0.114 Sum_probs=56.1
Q ss_pred CCCCcEEEECCCc--C---HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCC-------CCC---------------
Q 019861 176 VLGGNIIDASCGS--G---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-------NFP--------------- 228 (334)
Q Consensus 176 ~~~~~vLDiGcG~--G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~-------~~~--------------- 228 (334)
..++++|=.|++. | .++..|++.|. +|+.++.++...+.+.+...... .+.
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 3467899999763 2 35666777776 89999988654444433222110 111
Q ss_pred CCCceEEEeCccccC----C-----CCH--------------HHHHHHHHHcccCCcEEEEEEec
Q 019861 229 KDSIDAVHAGAAIHC----W-----SSP--------------STGVAEISRVLRPGGVFVGTTYI 270 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h----~-----~d~--------------~~~L~~i~r~LkpgG~lii~~~~ 270 (334)
-+..|+++.+..+.. . .++ ..+++.+.+.|+.+|.++.....
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 147899998766532 0 011 23456677778888888776543
No 480
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=56.22 E-value=5.3 Score=33.19 Aligned_cols=39 Identities=28% Similarity=0.548 Sum_probs=23.6
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 108 (334)
-.+.||.|+......+.............+.|++|+..+
T Consensus 21 l~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 21 LELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp EEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred eEEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 357899999865544432111111344578899998743
No 481
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=56.21 E-value=71 Score=27.08 Aligned_cols=46 Identities=26% Similarity=0.361 Sum_probs=35.3
Q ss_pred CCCcEEEECCCcCH---HHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC
Q 019861 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (334)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~ 224 (334)
+++.+|=-|.+.|- .+..|++.|. +|+.+|.+++.++...+.+...
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~ 54 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGM 54 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc
Confidence 46788888888773 4566667776 9999999999888887776543
No 482
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=56.18 E-value=7.1 Score=34.10 Aligned_cols=80 Identities=15% Similarity=0.080 Sum_probs=50.3
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhc-CCCCC--CCCceEEEeCccccCCCCH---HHH
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-ESNFP--KDSIDAVHAGAAIHCWSSP---STG 250 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~-~~~~~--~~~fD~V~~~~vl~h~~d~---~~~ 250 (334)
.+|.=||+|. | .++..+++.|. +|+++|.++..++.+.+.-.. ..... -. .|+|+.. ++++ ..+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~-----vp~~~~~~~v 87 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG--GVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHIT-----VLDDAQVREV 87 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT--CEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEEC-----CSSHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEE-----CCChHHHHHH
Confidence 5799999986 3 34556666665 899999998877666542100 00000 12 6777654 4554 356
Q ss_pred HHHHHHcccCCcEEEE
Q 019861 251 VAEISRVLRPGGVFVG 266 (334)
Q Consensus 251 L~~i~r~LkpgG~lii 266 (334)
++++...|++|..++-
T Consensus 88 ~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 88 VGELAGHAKPGTVIAI 103 (296)
T ss_dssp HHHHHTTCCTTCEEEE
T ss_pred HHHHHHhcCCCCEEEE
Confidence 7888888888776553
No 483
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=55.68 E-value=4.5 Score=35.14 Aligned_cols=29 Identities=17% Similarity=0.432 Sum_probs=21.0
Q ss_pred eeCCCCCCCccccCCCCcccccccCCcccccccccccc
Q 019861 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (334)
Q Consensus 72 l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (334)
.-||.||.++.... .....+|+.|+..+-
T Consensus 108 ~fC~~CG~~~~~~~---------~~~~~~C~~C~~~~y 136 (269)
T 1vk6_A 108 KYCGYCGHEMYPSK---------TEWAMLCSHCRERYY 136 (269)
T ss_dssp SBCTTTCCBEEECS---------SSSCEEESSSSCEEC
T ss_pred CccccCCCcCccCC---------CceeeeCCCCCCEec
Confidence 46999999875432 335789999997653
No 484
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=55.55 E-value=4.4 Score=22.05 Aligned_cols=12 Identities=25% Similarity=0.661 Sum_probs=9.0
Q ss_pred CceeCCCCCCCc
Q 019861 70 NVLACPICYKPL 81 (334)
Q Consensus 70 ~~l~CPiC~~~l 81 (334)
..+.||+|+..+
T Consensus 2 ~k~~CpvCk~q~ 13 (28)
T 2jvx_A 2 SDFCCPKCQYQA 13 (28)
T ss_dssp CCEECTTSSCEE
T ss_pred CcccCccccccC
Confidence 357899998853
No 485
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=55.46 E-value=5.3 Score=32.35 Aligned_cols=28 Identities=21% Similarity=0.531 Sum_probs=21.3
Q ss_pred eCCCCCCCccccCCCCcccccccCCcccccccccccccc
Q 019861 73 ACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 73 ~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
.|+.||..+...+ ..++|+.|+......
T Consensus 142 ~~~~~g~~m~~~~-----------~~~~cp~~g~~e~RK 169 (179)
T 3m7n_A 142 LCSNCKTEMVREG-----------DILKCPECGRVEKRK 169 (179)
T ss_dssp BCTTTCCBCEECS-----------SSEECSSSCCEECCC
T ss_pred cccccCCceEECC-----------CEEECCCCCCEEEEe
Confidence 4999999886543 679999999766543
No 486
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=54.97 E-value=3.2 Score=30.67 Aligned_cols=11 Identities=45% Similarity=1.017 Sum_probs=8.9
Q ss_pred eeCCCCCCCcc
Q 019861 72 LACPICYKPLT 82 (334)
Q Consensus 72 l~CPiC~~~l~ 82 (334)
-.||+||+++.
T Consensus 48 ~~CPvCgs~l~ 58 (112)
T 1l8d_A 48 GKCPVCGRELT 58 (112)
T ss_dssp EECTTTCCEEC
T ss_pred CCCCCCCCcCC
Confidence 36999999765
No 487
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=54.75 E-value=13 Score=34.20 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=51.9
Q ss_pred CCCcEEEECCCc-CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcC-CC----------------------------
Q 019861 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SN---------------------------- 226 (334)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~-~~---------------------------- 226 (334)
++.+|+=+|+|. |.....++... ..+|+++|.++..++.+++. ... ..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~l-Ga~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQSM-GAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHHT-TCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-CCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 578999999986 44444444332 24899999998877666432 111 00
Q ss_pred CCC--CCceEEEeCccccCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 227 FPK--DSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 227 ~~~--~~fD~V~~~~vl~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
+.+ ...|+|+..-.+.--+.|..+-++..+.|+|||+++-..
T Consensus 249 l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 249 FAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 000 136888876322111122222356777899999877644
No 488
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=54.67 E-value=14 Score=25.07 Aligned_cols=31 Identities=23% Similarity=0.519 Sum_probs=21.5
Q ss_pred ceeCCCCCCCccccCCCCcccccccCCcccccccccccccccCcc
Q 019861 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHF 115 (334)
Q Consensus 71 ~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~~~ 115 (334)
.-.|-.|+..+... -+.| .|+..|-..--|.
T Consensus 25 ~~RC~~C~kkvgL~-------------~f~C-rCg~~FCs~HRy~ 55 (74)
T 1wfp_A 25 ATRCLSCNKKVGVT-------------GFKC-RCGSTFCGTHRYP 55 (74)
T ss_dssp CCBCSSSCCBCTTT-------------CEEC-TTSCEECTTTCST
T ss_pred CccchhhcCccccc-------------ceEe-ccCCEeccccCCC
Confidence 36799999875442 3788 7998887764443
No 489
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=54.66 E-value=26 Score=30.41 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=30.2
Q ss_pred CcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHH
Q 019861 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (334)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~ 219 (334)
.+|.=||+|. | .++..++..|. +|+++|.+++.++.+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~ 56 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKK 56 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHH
Confidence 5799999987 3 35666777776 99999999988876643
No 490
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=54.45 E-value=47 Score=31.34 Aligned_cols=84 Identities=11% Similarity=0.046 Sum_probs=48.5
Q ss_pred CCCCcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCCC--CCCCceEEEeCccccCCCCHHHHH
Q 019861 176 VLGGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF--PKDSIDAVHAGAAIHCWSSPSTGV 251 (334)
Q Consensus 176 ~~~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~~--~~~~fD~V~~~~vl~h~~d~~~~L 251 (334)
..+++++=+|+|. | ..+..++..|. +|+++|+++.....+.......... .....|+|+....-.++-+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA--~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~----- 335 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA--RVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIM----- 335 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBC-----
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhh-----
Confidence 4578999999882 1 23444455565 9999999987666555422111111 1245888876543222222
Q ss_pred HHHHHcccCCcEEEE
Q 019861 252 AEISRVLRPGGVFVG 266 (334)
Q Consensus 252 ~~i~r~LkpgG~lii 266 (334)
.+..+.+++|+.++-
T Consensus 336 ~e~l~~mk~gaiVvN 350 (488)
T 3ond_A 336 LDHMKKMKNNAIVCN 350 (488)
T ss_dssp HHHHTTSCTTEEEEE
T ss_pred HHHHHhcCCCeEEEE
Confidence 235667788876654
No 491
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=54.38 E-value=19 Score=31.96 Aligned_cols=80 Identities=16% Similarity=0.312 Sum_probs=52.7
Q ss_pred CcEEEECCCc--CHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHh-------cCC-------------------CCC--
Q 019861 179 GNIIDASCGS--GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------QES-------------------NFP-- 228 (334)
Q Consensus 179 ~~vLDiGcG~--G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~-------~~~-------------------~~~-- 228 (334)
.+|-=||+|. +.++..++..|. +|+++|.+++.++.+.+.+. ..+ ...
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 5788899986 346677777776 89999999998888765421 111 000
Q ss_pred CCCceEEEeCccccCCCC-H---HHHHHHHHHcccCCcEEE
Q 019861 229 KDSIDAVHAGAAIHCWSS-P---STGVAEISRVLRPGGVFV 265 (334)
Q Consensus 229 ~~~fD~V~~~~vl~h~~d-~---~~~L~~i~r~LkpgG~li 265 (334)
-...|+|+. .+++ + ..+++++...++|+.+++
T Consensus 85 v~~aDlVie-----avpe~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 VEGVVHIQE-----CVPENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp TTTEEEEEE-----CCCSCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred HhcCCEEEE-----eccCCHHHHHHHHHHHHhhCCCCeEEE
Confidence 124566654 3453 2 357888888998887554
No 492
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=54.35 E-value=5.1 Score=31.04 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=22.2
Q ss_pred CCceeCCCCCCCccccC-CCCcccccccCC----------cccccccccccc
Q 019861 69 KNVLACPICYKPLTWIG-DSSLSIESAAGS----------SLQCNTCKKTYS 109 (334)
Q Consensus 69 ~~~l~CPiC~~~l~~~~-~~~~~~~~~~~~----------~~~C~~C~~~~~ 109 (334)
.....|+.||....... .+.+.. ..... ...||.||+...
T Consensus 68 p~~~~C~~CG~~~~~~~~~~~~~~-~~~~~~h~~p~~~~~~~~CP~Cgs~~~ 118 (139)
T 3a43_A 68 EAVFKCRNCNYEWKLKEVKDKFDE-RIKEDIHFIPEVVHAFLACPKCGSHDF 118 (139)
T ss_dssp CCEEEETTTCCEEEGGGCTTCCSC-CCGGGCCCCGGGCGGGCSCSSSSCCCE
T ss_pred CCcEECCCCCCEEecccccccccc-cccccccccccccccCCcCccccCCcc
Confidence 45688999998543221 000100 01112 688999998654
No 493
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=54.29 E-value=98 Score=26.05 Aligned_cols=91 Identities=16% Similarity=0.131 Sum_probs=55.4
Q ss_pred CCCcEEEECCCcC---HHHHHHHHcCCCCeEEEEeCC------------HHHHHHHHHHHhcCC--------CCC-----
Q 019861 177 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQES--------NFP----- 228 (334)
Q Consensus 177 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s------------~~~~~~a~~~~~~~~--------~~~----- 228 (334)
.++++|=.|++.| ..+..|++.|. +|+.+|.+ ...++.....+.... .+.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 4678898888765 34566667776 89999877 555555444333211 111
Q ss_pred ----------CCCceEEEeCccccCCC---C---H-----------HHHHHHHHHcccCCcEEEEEEe
Q 019861 229 ----------KDSIDAVHAGAAIHCWS---S---P-----------STGVAEISRVLRPGGVFVGTTY 269 (334)
Q Consensus 229 ----------~~~fD~V~~~~vl~h~~---d---~-----------~~~L~~i~r~LkpgG~lii~~~ 269 (334)
-+..|+++.+..+.... + . ..+++.+...|+.+|.++...-
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 14789999876653321 1 1 2345667777788888776543
No 494
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=54.28 E-value=23 Score=33.43 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=42.1
Q ss_pred HHHHHcccCCC------CCCcEEEECCCcCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH
Q 019861 166 FELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFV 221 (334)
Q Consensus 166 ~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~ 221 (334)
...+..+++.. ...+++|+=||.|.+...+...|. ..+.++|+++.+.+.-+.++
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHS
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhc
Confidence 44555555432 235899999999999999998885 35789999999888777765
No 495
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=54.21 E-value=51 Score=29.13 Aligned_cols=81 Identities=4% Similarity=-0.137 Sum_probs=50.0
Q ss_pred CcEEEE-CCC-cCHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHHhcCCC--CC-------------CCCceEEEeCccc
Q 019861 179 GNIIDA-SCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FP-------------KDSIDAVHAGAAI 241 (334)
Q Consensus 179 ~~vLDi-GcG-~G~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~~~~~~--~~-------------~~~fD~V~~~~vl 241 (334)
.+||=. |+| .|..+..+++.. ..+|+++|.++.-++.+++. ..... .. ...+|+|+-...-
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~~-Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~ 243 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE-GFRPIVTVRRDEQIALLKDI-GAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTG 243 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESCGGGHHHHHHH-TCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-CCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCC
Confidence 455543 333 255555555542 23999999999888888753 21110 00 1358888865432
Q ss_pred cCCCCHHHHHHHHHHcccCCcEEEEEE
Q 019861 242 HCWSSPSTGVAEISRVLRPGGVFVGTT 268 (334)
Q Consensus 242 ~h~~d~~~~L~~i~r~LkpgG~lii~~ 268 (334)
..+..+.+.|+++|++++..
T Consensus 244 -------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 244 -------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp -------HHHHHHHHHSCTTCEEEECC
T ss_pred -------hhHHHHHhhhcCCCEEEEEe
Confidence 23477889999999998864
No 496
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=53.49 E-value=53 Score=30.40 Aligned_cols=88 Identities=16% Similarity=0.204 Sum_probs=52.5
Q ss_pred CCCcEEEECCCc-C-HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH------------hc---CCC----CCCCCceEE
Q 019861 177 LGGNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFV------------QQ---ESN----FPKDSIDAV 235 (334)
Q Consensus 177 ~~~~vLDiGcG~-G-~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~------------~~---~~~----~~~~~fD~V 235 (334)
.+.++--||.|. | .++..|++.|. +|+++|.+++.++..++.. .. ... -.-...|+|
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~--~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvv 87 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGV--DVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVF 87 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEE
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEE
Confidence 366778888886 3 34666777777 9999999999887766420 00 000 001246777
Q ss_pred EeCcccc------CCCCH---HHHHHHHHHcccCCcEEEE
Q 019861 236 HAGAAIH------CWSSP---STGVAEISRVLRPGGVFVG 266 (334)
Q Consensus 236 ~~~~vl~------h~~d~---~~~L~~i~r~LkpgG~lii 266 (334)
+..---. .-+|. ..+.+.+.+.|++|..++.
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~ 127 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV 127 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE
Confidence 7642111 11222 4556788888998875554
No 497
>1ee8_A MUTM (FPG) protein; beta sandwich, zinc finger, helix two-turns helix, riken STR genomics/proteomics initiative, RSGI, structural genomics; 1.90A {Thermus thermophilus} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=53.35 E-value=4.3 Score=35.21 Aligned_cols=28 Identities=32% Similarity=0.669 Sum_probs=20.2
Q ss_pred eeCCCCCCCccccCCCCcccccccCCccccccccc
Q 019861 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKK 106 (334)
Q Consensus 72 l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~ 106 (334)
..||.||.++..... .....+.|+.|..
T Consensus 236 ~pC~~CG~~I~~~~~-------~gR~t~~CP~CQ~ 263 (266)
T 1ee8_A 236 LPCPACGRPVERRVV-------AGRGTHFCPTCQG 263 (266)
T ss_dssp SBCTTTCCBCEEEES-------SSCEEEECTTTTT
T ss_pred CCCCCCCCEeeEEEE-------CCCceEECCCCCC
Confidence 579999998754331 1346899999985
No 498
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=53.32 E-value=4.5 Score=27.12 Aligned_cols=35 Identities=23% Similarity=0.409 Sum_probs=21.9
Q ss_pred CceeCCCCCCCccccCCCCcccccccCCcccccccccccccc
Q 019861 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (334)
Q Consensus 70 ~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (334)
....||+|+.+..+.... ...-+.+..|..+...+
T Consensus 8 ~~~~CP~Cgkp~~W~~~~-------~~rPFCSeRCr~iDLg~ 42 (68)
T 1lv3_A 8 ITVNCPTCGKTVVWGEIS-------PFRPFCSKRCQLIDLGE 42 (68)
T ss_dssp CEEECTTTCCEEECSSSS-------SCCSSSSHHHHHHHHSC
T ss_pred CcCcCCCCCCcccccccC-------CCCcccCHHHHhhhHHH
Confidence 456899999987654210 12346666787776543
No 499
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=53.24 E-value=1.1e+02 Score=26.47 Aligned_cols=43 Identities=14% Similarity=0.204 Sum_probs=31.8
Q ss_pred CCCcEEEECCCcC---HHHHHHHHcCCCCeEEEEeCCHHHHHHHHHHH
Q 019861 177 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDYSENMLKQCYEFV 221 (334)
Q Consensus 177 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~giD~s~~~~~~a~~~~ 221 (334)
.+++||=.|++.| .+...|++.|. +|++++.+...++.+.+.+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l 52 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATL 52 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHH
Confidence 4678999998766 34566666776 8999999988777666544
No 500
>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA-direct polymerase, primosome, late protein, ATP-binding; HET: DNA; 2.90A {Enterobacteria phage T7} SCOP: e.13.1.2 g.41.3.2
Probab=53.22 E-value=5.3 Score=34.20 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=20.2
Q ss_pred CCCceeCCCCCCCccccCCCCcccccccCCcccccccccc
Q 019861 68 SKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKT 107 (334)
Q Consensus 68 ~~~~l~CPiC~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~ 107 (334)
......||.||+.-. +..... +.+.|.+||..
T Consensus 11 ~~~~~~CP~Cg~~d~------~~~~~d--g~~~C~~Cg~~ 42 (255)
T 1nui_A 11 FLYHIPCDNCGSSDG------NSLFSD--GHTFCYVCEKW 42 (255)
T ss_dssp EEEEECCSSSCCSSC------EEEETT--SCEEETTTCCE
T ss_pred eecCCcCCCCCCCCC------ceEeCC--CCeecccCCCc
Confidence 334678999998521 222211 35999999975
Done!