Query 019862
Match_columns 334
No_of_seqs 162 out of 1421
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 08:13:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019862.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019862hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1c96_A Mitochondrial aconitase 100.0 1.7E-73 5.8E-78 598.9 24.6 252 66-334 32-305 (753)
2 2b3y_A Iron-responsive element 100.0 4.5E-69 1.5E-73 571.5 15.2 256 66-322 49-325 (888)
3 1l5j_A Aconitate hydratase 2; 100.0 6.3E-65 2.2E-69 537.5 26.8 248 49-318 362-622 (865)
4 1x9g_A Putative MAR1; structur 44.5 1.5E+02 0.0053 25.5 10.2 162 121-325 14-186 (200)
5 1usm_A DCOH, hepatocyte nuclea 23.0 1.4E+02 0.0048 22.2 5.1 40 220-259 32-71 (80)
6 3jst_A Putative pterin-4-alpha 20.8 1.3E+02 0.0045 23.3 4.7 40 220-259 50-89 (97)
7 3hxa_A Pterin-4-alpha-carbinol 17.4 2E+02 0.0068 22.6 5.1 41 219-259 53-93 (104)
8 1jwq_A N-acetylmuramoyl-L-alan 17.3 1.5E+02 0.0052 25.2 4.8 46 249-294 21-69 (179)
9 2ebb_A Pterin-4-alpha-carbinol 17.3 1.8E+02 0.0061 22.7 4.8 40 220-259 46-85 (101)
10 2v6u_A Pterin-4A-carbinolamine 16.6 1.8E+02 0.0062 22.8 4.7 40 220-259 53-92 (104)
No 1
>1c96_A Mitochondrial aconitase; lyase, tricarboxylic acid cycle, iron-sulfur, mitochondrion, transit peptide, 4Fe-4S, 3D-structure; HET: FLC; 1.81A {Bos taurus} SCOP: c.8.2.1 c.83.1.1 PDB: 1c97_A* 1b0k_A* 1b0j_A* 7acn_A* 6acn_A* 5acn_A* 1b0m_A* 1ami_A* 1amj_A 8acn_A* 1fgh_A* 1aco_A* 1nis_A* 1nit_A
Probab=100.00 E-value=1.7e-73 Score=598.85 Aligned_cols=252 Identities=26% Similarity=0.367 Sum_probs=230.9
Q ss_pred CCCCcHHHHHHHHhcCCCC---C-CCCCeEEEeeeEEEecCCChHHHHHHHHHHhCCCCcccCCccEEEEecCCCCCC--
Q 019862 66 KNAMTLTEKIFSRASEKPQ---L-SPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKIVIIPDHYIFTS-- 139 (334)
Q Consensus 66 ~~~mTl~EKIla~h~~~~~---v-~~Gd~v~v~vD~v~~hD~t~p~~i~~~~~~~G~~~~V~dP~kv~~~~DH~vp~~-- 139 (334)
++||||+||||++|++... + ++||++.+++|++++||+|+|+++..|++ +|. .++++|+++ ++||++|+.
T Consensus 32 ~~~~Tl~eKIl~~H~~~~~~~~~~~~g~~i~~~~drvl~hD~T~~~a~~~l~~-~G~-~~v~~P~~~--~~DH~v~~~~~ 107 (753)
T 1c96_A 32 NRPLTLSEKIVYGHLDDPANQEIERGKTYLRLRPDRVAMQDATAQMAMLQFIS-SGL-PKVAVPSTI--HCDHLIEAQLG 107 (753)
T ss_dssp CSCCCHHHHHHHTTBSCTTTCCCCTTTCEEEECCSEEEEETTTHHHHHHHHHH-HTC-SSCSSCEEE--ECCSSCCBSSC
T ss_pred CCCCCHHHHHHHHHhCCcccccccCCCCEEEEEccEEEEeccccHHHHHHHHH-hCC-CCCCCCCce--ecCCCCCCCCC
Confidence 4689999999999998652 3 67899999999999999999999999964 784 679999884 699999998
Q ss_pred ---c-----HHHHHHHHHHHHHHHHcCcceeeeccccCCcccCCCCCeeeeeeecceeeeeCCceEEeCCCCCcccCccc
Q 019862 140 ---D-----ERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAGAFG 211 (334)
Q Consensus 140 ---~-----~~~a~~~~~lr~fa~~~gi~~f~d~~~~~~~~v~pp~~GI~Hqvl~Eeg~~~PG~vvvGtDSHT~t~GAlG 211 (334)
+ ..+.++++++|+||+++||. || ||++|||||+++|. ++.||+++||+||||||+||||
T Consensus 108 ~~~d~~~~~~~n~e~~~~l~~~a~~~gi~-~~-----------~pg~GI~Hqv~~E~-~~~Pg~~ivGtDSHT~t~GalG 174 (753)
T 1c96_A 108 GEKDLRRAKDINQEVYNFLATAGAKYGVG-FW-----------RPGSGIIHQIILEN-YAYPGVLLIGTDSHTPNGGGLG 174 (753)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHTCE-EE-----------CTTSBCHHHHHHHH-TCCTTCEEEESSTTGGGGGGGT
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHCCCE-EE-----------CCCCCeeCeEeccc-ccCCCcEEecCCCCCCccchhh
Confidence 2 34558899999999999995 55 56799999999886 9999999999999999999999
Q ss_pred ceeecCchhHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHHHHHHhcccCccceEEEEecccccCCCHHhHHh
Q 019862 212 QFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERLSMEERMT 291 (334)
Q Consensus 212 a~a~GvG~td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ii~~lg~~G~~gk~vEF~G~gv~~Ls~~eR~T 291 (334)
+||||||++|++++|+++++||++||+|+|+|+|+|++||++|||||+|+++|+++|++|++|||+||||++|||++|||
T Consensus 175 ~la~GvG~~e~~~vmagq~~~~~~P~vv~V~l~G~L~~gVtakDviL~ii~~l~~~G~~g~~vEf~G~gv~~LS~~~R~T 254 (753)
T 1c96_A 175 GICIGVGGADAVDVMAGIPWELKCPKVIGVKLTGSLSGWTSPKDVILKVAGILTVKGGTGAIVEYHGPGVDSISCTGMAT 254 (753)
T ss_dssp CEEEECCHHHHHHHHHTCCEEEECCEEEEEEEESCCCTTCCHHHHHHHHHHHHTTTTTTTEEEEEESGGGGGSCHHHHHH
T ss_pred hheeccCHHHHHHHHhCCeeeccCCcEEEEEEeeecCCCccHHHHHHHHHHHhccCCcceEEEEEECCccccCCcchhhh
Confidence 99999999999999997777799999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCceEeeecCChhHHHHhhhcCC--------CCCccccCCCCCC
Q 019862 292 LCNMVVEAGGKNGVVPADGTTFKYLEDKTS--------LPYEPVYSDEKAR 334 (334)
Q Consensus 292 l~NMa~E~GAk~gi~~pDe~t~~YL~~r~~--------~~~~~~~sD~dA~ 334 (334)
||||++|+||++|+||+|++|++||+.+++ ..|+.|++|+||.
T Consensus 255 I~NMa~E~GA~~gifp~De~T~~YL~~~gr~~~~~~~~~y~~~l~~D~~A~ 305 (753)
T 1c96_A 255 ICNMGAEIGATTSVFPYNHRMKKYLSKTGRADIANLADEFKDHLVPDPGCH 305 (753)
T ss_dssp HHHHGGGGTCSEEECCCCHHHHHHHHHTTCHHHHHHHHHTGGGSSCCTTCC
T ss_pred hhccchhhCcccccccCcHHHHHHHHhcCCcHHHHHHHHHHhhccCCCCCc
Confidence 999999999999999999999999999887 3357899999984
No 2
>2b3y_A Iron-responsive element binding protein 1; IRP1 IRE-IRP1 aconitase activity, lyase; 1.85A {Homo sapiens} SCOP: c.8.2.1 c.83.1.1 PDB: 2b3x_A 3snp_A 3sn2_A 2ipy_A
Probab=100.00 E-value=4.5e-69 Score=571.47 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=231.0
Q ss_pred CCCCcHHHHHHHHhcCC-CCCCCCCeEEEeeeEEEecCCChHHHHHHHHHH------hCCCCcccCCc-cEEEEecCCCC
Q 019862 66 KNAMTLTEKIFSRASEK-PQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKE------FGENAKVWDRE-KIVIIPDHYIF 137 (334)
Q Consensus 66 ~~~mTl~EKIla~h~~~-~~v~~Gd~v~v~vD~v~~hD~t~p~~i~~~~~~------~G~~~~V~dP~-kv~~~~DH~vp 137 (334)
..|.|++||++.++++- +..++|+++.+++|++++||+|+|+++..|++. +|.++...+|. ++++++||++|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~pdrvl~qD~Tg~~a~~~l~~mr~a~~~~g~d~~ki~p~~pv~lv~DH~v~ 128 (888)
T 2b3y_A 49 CDEFLVKKQDIENILHWNVTQHKNIEVPFKPARVILQDFTGVPAVVDFAAMRDAVKKLGGDPEKINPVCPADLVIDHSIQ 128 (888)
T ss_dssp CCSSSSCHHHHHHHHTHHHHTTTTCEEEECCSEEEEEHHHHHHHHHHHHHHHHHHHHTTCCGGGSSCSSCEEEECCSSCC
T ss_pred cCCcchhHHHHHHHhcccccCCCCCEEEEeccEEEEEccccHHHHHHHHHHHHHHHhcCCChhhcCCCCCeeEEeCCCCC
Confidence 35899999999999863 335789999999999999999999999887532 25545555776 57899999999
Q ss_pred CCcHH--HHHHHHHHHHHHHHcCccee--eeccccCCcccCCCCCeeeeeeecc---------eeeeeCCceEEeCCCCC
Q 019862 138 TSDER--ANRNVDILRDFCMEQNIKYF--YDIKDLGNFKANPDYKGVCHIALAQ---------EGHCRPGEVLLGTDSHT 204 (334)
Q Consensus 138 ~~~~~--~a~~~~~lr~fa~~~gi~~f--~d~~~~~~~~v~pp~~GI~Hqvl~E---------eg~~~PG~vvvGtDSHT 204 (334)
+.+.. .+..++.+++|.++.+++.| |....+.+|+++||++|||||+++| +|++.|| +||||||||
T Consensus 129 ~~~~~~~da~~~n~~~e~~rN~e~~~fL~w~~~~f~~~~~~~pG~GI~Hqv~lE~la~~v~~~~G~~~P~-tlVGtDSHT 207 (888)
T 2b3y_A 129 VDFNRRADSLQKNQDLEFERNRERFEFLKWGSQAFHNMRIIPPGSGIIHQVNLEYLARVVFDQDGYYYPD-SLVGTDSHT 207 (888)
T ss_dssp CSSCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECTTSCCHHHHHHHTTCCSEEEETTEEEEC-EEEESSGGG
T ss_pred cCCccccCHHHHHHHHHHHHhcchHHHHHHHHHhccCCCCCCCCCCCcceehhhhccccccccCcccccC-eEEecCCCc
Confidence 87633 55666777899999988766 6666778999999999999999988 8999995 899999999
Q ss_pred cccCcccceeecCchhHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHHHHHHhcccCccceEEEEecccccCC
Q 019862 205 CTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATYKSMEFVGTTVERL 284 (334)
Q Consensus 205 ~t~GAlGa~a~GvG~td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ii~~lg~~G~~gk~vEF~G~gv~~L 284 (334)
||+||||+||||||++|++++|+||++||++||+|+|+|+|+|++||++|||||+|+++|+++|++|++|||+||||++|
T Consensus 208 ~t~GglG~la~GVGg~eae~~mag~~~~~~~PevvgV~ltG~L~~gVtakDviL~i~~~l~~~G~vGk~vEF~G~gv~~L 287 (888)
T 2b3y_A 208 TMIDGLGILGWGVGGIEAEAVMLGQPISMVLPQVIGYRLMGKPHPLVTSTDIVLTITKHLRQVGVVGKFVEFFGPGVAQL 287 (888)
T ss_dssp GGGGGGTCEEEECCHHHHHHHHTTCCEEEECCCEEEEEEESCCCTTCCHHHHHHHHHHHHHHHCCTTCEEEEESGGGTTS
T ss_pred cccCcceeEEEccCHHHHHHHHhcCcEeecCCCEEEEEEEccCCCCcchhHHHHHHHHHhccCCccceEEEEecCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHhHHhhhhhhhhcCceEeeecCChhHHHHhhhcCCC
Q 019862 285 SMEERMTLCNMVVEAGGKNGVVPADGTTFKYLEDKTSL 322 (334)
Q Consensus 285 s~~eR~Tl~NMa~E~GAk~gi~~pDe~t~~YL~~r~~~ 322 (334)
|+++|||||||++|+||++|+||+|++|++||+.+++.
T Consensus 288 S~~~R~TI~NMa~E~GAt~g~fp~De~T~~YL~~~gr~ 325 (888)
T 2b3y_A 288 SIADRATIANMCPEYGATAAFFPVDEVSITYLVQTGRD 325 (888)
T ss_dssp CHHHHHHHHHTHHHHTCSEEECCCCHHHHHHHHHTTCC
T ss_pred cccchhhhhhcchhhCCeeEEecCcHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999998774
No 3
>1l5j_A Aconitate hydratase 2; molecular recognition, RNA binding, citric acid cycle, heat- like domain, lyase; HET: TRA; 2.40A {Escherichia coli} SCOP: a.118.15.1 c.8.2.1 c.83.1.1
Probab=100.00 E-value=6.3e-65 Score=537.54 Aligned_cols=248 Identities=19% Similarity=0.223 Sum_probs=227.4
Q ss_pred eeCCCCCCCCCCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCeEEEeeeEEEecCCChHHHHHHHHHHhCCCCcccCCccE
Q 019862 49 VMAPQQSERRPATTGSVKNAMTLTEKIFSRASEKPQLSPGDNVWVNVDILMTHDVCGPGSFGIFKKEFGENAKVWDREKI 128 (334)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~mTl~EKIla~h~~~~~v~~Gd~v~v~vD~v~~hD~t~p~~i~~~~~~~G~~~~V~dP~kv 128 (334)
-..|..-++.|..+.+.+|||||+||||++|++.+.|++||+|++++|++++||+|+|++++.|++ +| ..+|+|+++
T Consensus 362 ~~~~~~~f~~~~~~~~~~mg~TlaEKIl~~~~g~~~v~~G~~v~~~~D~v~~qD~Tg~~~~~~~~~-lg--~~~~~~d~v 438 (865)
T 1l5j_A 362 GLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKD-LA--CLGFSADLV 438 (865)
T ss_dssp TCCCCCSSCCCCCCCCCCSCCCHHHHHHHHTTTSSCCCTTCEECCBCSEEEECTTTHHHHHHHHHH-TT--CCSCCSSCE
T ss_pred CCCchhhccCCCCCCCCCCCccHHHHHHHHHhCCCccCCCCEEEEEeeEEEEeccCcHHHHHHHHH-cC--CCcCCCCeE
Confidence 345667889999999999999999999999999888999999999999999999999999999964 77 358999999
Q ss_pred EEEecCCCCCCcHHHHHHHHHHHHHHHHcCcceeeeccccCCcccCCCCCeeeeeeecceeeeeCCceEEeCCCCCcccC
Q 019862 129 VIIPDHYIFTSDERANRNVDILRDFCMEQNIKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCRPGEVLLGTDSHTCTAG 208 (334)
Q Consensus 129 ~~~~DH~vp~~~~~~a~~~~~lr~fa~~~gi~~f~d~~~~~~~~v~pp~~GI~Hqvl~Eeg~~~PG~vvvGtDSHT~t~G 208 (334)
+.++||.++.++..+.+.++.+++|++++++. || ||++|||||+++ +++.||+++||+|||||++|
T Consensus 439 v~~~dh~~~~~~~~~~e~~~~~~~Fa~~~g~~-~~-----------~pg~GI~Hq~l~--~~~~PG~~ivGtDSHT~~~~ 504 (865)
T 1l5j_A 439 MQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGV-SL-----------RPGDGVIHSWLN--RMLLPDTVGTGGDSHTRFPI 504 (865)
T ss_dssp EECCCSSSSSCCHHHHHHHHHHHHHHHTTTCE-EC-----------CTTSBCHHHHHG--GGCCTTCEEEESSTTCCCSS
T ss_pred EEECCCCCcCCCHHHHHHHHHHHHHHHHcCCe-Ee-----------CCCCceeeeeec--ccccccceEEeCCCCccccc
Confidence 99999999999999999999999999999984 44 578999999875 39999999999999999999
Q ss_pred cccceeecCchhHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHHHH------HHhcc------cCccceEEEE
Q 019862 209 AFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQII------GEISV------AGATYKSMEF 276 (334)
Q Consensus 209 AlGa~a~GvG~td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ii------~~lg~------~G~~gk~vEF 276 (334)
+ +|+|.|++|++.+|+||++|+++||+|+|+|+|+|++||++|||||+|+ +.|++ ++++|++|||
T Consensus 505 G---lg~g~G~g~vA~a~atG~~~~~vPevv~V~l~G~L~~gVtaKDvIL~i~~~~i~~G~l~v~k~g~~~~~~G~~vEf 581 (865)
T 1l5j_A 505 G---ISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEI 581 (865)
T ss_dssp S---EECCCCHHHHHHHHHHSBCCEECCCEEEEEEESCCCTTCCHHHHHHHHHHHHHHTTSBCSCSTTCCBTTTTSEEEE
T ss_pred c---ceeCccHHHHHHHHHcCceeecCCCEEEEEEEeeCCCCCChHHHHHHHHHHHHhcccccccccCcccceeeEEEEE
Confidence 6 5778899999999999999999999999999999999999999999995 33444 5679999999
Q ss_pred ecccccCCCHHhHHhhhhhhhhcCceEeeecCC-hhHHHHhhh
Q 019862 277 VGTTVERLSMEERMTLCNMVVEAGGKNGVVPAD-GTTFKYLED 318 (334)
Q Consensus 277 ~G~gv~~Ls~~eR~Tl~NMa~E~GAk~gi~~pD-e~t~~YL~~ 318 (334)
+||++||+++|||||||++|+||++|+||+| ++|++||+.
T Consensus 582 --~Gv~~LS~~~R~TI~NMa~E~GA~~g~f~~dDe~t~~YL~~ 622 (865)
T 1l5j_A 582 --EGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNS 622 (865)
T ss_dssp --ESCTTCCHHHHHHHHHGGGTTTCSEEEECCCHHHHHHHHHH
T ss_pred --cccccCChhhhhhHhhcchhcCCeeEEEeCCHHHHHHHHHh
Confidence 4799999999999999999999999999976 788999998
No 4
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=44.52 E-value=1.5e+02 Score=25.51 Aligned_cols=162 Identities=10% Similarity=0.049 Sum_probs=96.1
Q ss_pred cccCCc-cEEEEecCCC---CC--CcHHHHHHHHHHHHHHHHcC--cceeeeccccCCcccCCCCCeeeeeeecceeeee
Q 019862 121 KVWDRE-KIVIIPDHYI---FT--SDERANRNVDILRDFCMEQN--IKYFYDIKDLGNFKANPDYKGVCHIALAQEGHCR 192 (334)
Q Consensus 121 ~V~dP~-kv~~~~DH~v---p~--~~~~~a~~~~~lr~fa~~~g--i~~f~d~~~~~~~~v~pp~~GI~Hqvl~Eeg~~~ 192 (334)
...+|. ..++++|..- +. .......+.+.+.+.+|+.| +.-+|-.. .|++.| ++.+|-. .
T Consensus 14 ~~~~~~~tALlvID~Q~~f~~~~~~~~~vi~~i~~ll~~ar~~g~~~pVi~t~~-------~~~~~G---~~~~eL~--~ 81 (200)
T 1x9g_A 14 PHYSKGKTAFLCVDLQEAFSKRIENFANCVFVANRLARLHEVVPENTKYIVTEH-------YPKGLG---RIVPEIT--L 81 (200)
T ss_dssp CCTTSSCEEEEEECCBTTTTTTSTTHHHHHHHHHHHHHHHHHSTTSEEEEEEEE-------SCSSSC---CBCTTSC--C
T ss_pred hccCCCCEEEEEECChHHHhhccCCHHHHHHHHHHHHHHHHHhCCCceEEEEee-------cCCccC---ccCHHHh--C
Confidence 345665 5777888733 21 22345567777888899999 76655422 244444 3334433 6
Q ss_pred CC-ceEEeCCCCCcccCcccceeecCchhHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHHHHHHhcccCccc
Q 019862 193 PG-EVLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQIIGEISVAGATY 271 (334)
Q Consensus 193 PG-~vvvGtDSHT~t~GAlGa~a~GvG~td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ii~~lg~~G~~g 271 (334)
|+ +.++-= ..++|| . + ++...|. ..=.+.+.|---..+ ++.-....... |
T Consensus 82 ~~~~~vi~K----~~~SaF---~-~----~L~~~L~---------gi~~lvi~Gv~T~~C-----V~~Ta~dA~~~---G 132 (200)
T 1x9g_A 82 PKTAHLIEK----TRFSCV---V-P----QVEELLE---------DVDNAVVFGIEGHAC-----ILQTVADLLDM---N 132 (200)
T ss_dssp CTTCEEEEE----SSSSSC---C-H----HHHHTTT---------TCCEEEEEEECTTTH-----HHHHHHHHHHT---T
T ss_pred CCCCeEEeC----CCCCCc---h-h----hHHHHhC---------CCCEEEEEEEecCcH-----HHHHHHHHHhC---C
Confidence 88 877732 234444 1 2 6666655 345688888854443 22222222222 4
Q ss_pred eEEEEecccccCCCHHh-HHhhhhhhh-hcCceEeeecCChhHHHHhhhcCCCCCc
Q 019862 272 KSMEFVGTTVERLSMEE-RMTLCNMVV-EAGGKNGVVPADGTTFKYLEDKTSLPYE 325 (334)
Q Consensus 272 k~vEF~G~gv~~Ls~~e-R~Tl~NMa~-E~GAk~gi~~pDe~t~~YL~~r~~~~~~ 325 (334)
.-+-..-+++.+.+.+. ..+|.+|.- ..|+. +...++...+|++......|+
T Consensus 133 y~V~Vv~Da~as~~~~~h~~aL~~m~~~~~g~~--v~tte~vl~~l~~~~~~~~fk 186 (200)
T 1x9g_A 133 KRVFLPKDGLGSQKKTDFKAAIKLMSSWGPNCE--ITTSESILLQMTKDAMDPNFK 186 (200)
T ss_dssp CEEEEEGGGEECSSHHHHHHHHHHHHTSCSSEE--EECHHHHHHHHSCCTTCTTHH
T ss_pred CEEEEeCCCcCCCCHHHHHHHHHHHHhhCCCeE--EecHHHHHHHHHHhcCCccHH
Confidence 45778889999999776 677888873 56665 566677778888765444444
No 5
>1usm_A DCOH, hepatocyte nuclear factor 1-alpha; transcriptional stimulator, dimerization cofactor, dehydratase, 4A-carbinolamine dehydratase; 1.2A {Thermus thermophilus} SCOP: d.74.1.1 PDB: 1uso_A
Probab=22.96 E-value=1.4e+02 Score=22.23 Aligned_cols=40 Identities=8% Similarity=-0.231 Sum_probs=33.0
Q ss_pred hHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHH
Q 019862 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (334)
Q Consensus 220 td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ 259 (334)
.+++..+--.+-|.-....|.|.|+-.=..|++.+|++|.
T Consensus 32 a~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlt~~D~~lA 71 (80)
T 1usm_A 32 GALAERENHHPRLTVEWGRVTVEWWTHSAGGVTEKDREMA 71 (80)
T ss_dssp HHHHHHHTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHH
T ss_pred HHHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 3456666667888889999999998777789999999985
No 6
>3jst_A Putative pterin-4-alpha-carbinolamine dehydratase; lyase, structural genomics, seattle structural genomics CENT infectious disease, ssgcid; 2.10A {Brucella melitensis} SCOP: d.74.1.0
Probab=20.83 E-value=1.3e+02 Score=23.28 Aligned_cols=40 Identities=8% Similarity=-0.043 Sum_probs=34.3
Q ss_pred hHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHH
Q 019862 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (334)
Q Consensus 220 td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ 259 (334)
.+++..+--.+-|.-+...|.|+|+=.=..|++.+|++|.
T Consensus 50 a~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlT~~D~~lA 89 (97)
T 3jst_A 50 ALYAEKLDHHPEWFNAYNRVDVTLATHSENGVTELDIKMA 89 (97)
T ss_dssp HHHHHHHTCCCEEEEETTEEEEEECBGGGTBCCHHHHHHH
T ss_pred HHHHHHhCCCCeEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 4666777778889999999999998877789999999985
No 7
>3hxa_A Pterin-4-alpha-carbinolamine dehydratase; alpha and beta structure, lyase, nucleus, tetrahydrobiopteri biosynthesis; 1.80A {Rattus norvegicus} SCOP: d.74.1.1 PDB: 1dco_A 1dch_A 1dcp_A* 1f93_A
Probab=17.45 E-value=2e+02 Score=22.59 Aligned_cols=41 Identities=15% Similarity=0.015 Sum_probs=35.0
Q ss_pred hhHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHH
Q 019862 219 NTDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (334)
Q Consensus 219 ~td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ 259 (334)
-.+++..+---+-|.-+...|.|+|+=.=..|++.+|++|.
T Consensus 53 Va~~AE~~~HHPdi~~~y~~V~v~l~THd~gGlT~~D~~lA 93 (104)
T 3hxa_A 53 VALQAEKLDHHPEWFNVYNKVHITLSTHECAGLSERDINLA 93 (104)
T ss_dssp HHHHHHHHTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 34666777778889999999999998888889999999985
No 8
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=17.34 E-value=1.5e+02 Score=25.22 Aligned_cols=46 Identities=9% Similarity=0.055 Sum_probs=32.8
Q ss_pred CCCC-HHHHHHHHHHHhcccC-cc-ceEEEEecccccCCCHHhHHhhhh
Q 019862 249 DYLL-AKDLILQIIGEISVAG-AT-YKSMEFVGTTVERLSMEERMTLCN 294 (334)
Q Consensus 249 ~gV~-aKDliL~ii~~lg~~G-~~-gk~vEF~G~gv~~Ls~~eR~Tl~N 294 (334)
.|+. -||+.|.|..++...- .. |.-|-++=+.=..+++.+|..++|
T Consensus 21 ~g~~~Ek~~~l~ia~~l~~~L~~~~G~~V~ltR~~D~~~~L~~R~~~an 69 (179)
T 1jwq_A 21 SRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAE 69 (179)
T ss_dssp TSSCBHHHHHHHHHHHHHHHHHTCTTEEEEESCSSSCCCCHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCHHHHHHHHH
Confidence 5788 9999998877665321 12 444556666556789999999988
No 9
>2ebb_A Pterin-4-alpha-carbinolamine dehydratase; coenzyme biosyntheses, GK1984, structural genomics, NPPSFA; 1.60A {Geobacillus kaustophilus}
Probab=17.27 E-value=1.8e+02 Score=22.72 Aligned_cols=40 Identities=10% Similarity=-0.121 Sum_probs=33.4
Q ss_pred hHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHH
Q 019862 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (334)
Q Consensus 220 td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ 259 (334)
.+++..+--.+-|.-+...|.|.|+-.=..|++.+|++|.
T Consensus 46 a~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlt~~D~~lA 85 (101)
T 2ebb_A 46 AAISENANHHPFISIDYKLITVKLSSWRAKGLTKLDFDLA 85 (101)
T ss_dssp HHHHHHTTCCCEEEEETTEEEEEECBTTTTBCCHHHHHHH
T ss_pred HHHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 4556666677889999999999998877789999999984
No 10
>2v6u_A Pterin-4A-carbinolamine dehydratase; lyase, enzyme; 1.6A {Toxoplasma gondii} PDB: 2v6s_A 2v6t_A*
Probab=16.65 E-value=1.8e+02 Score=22.77 Aligned_cols=40 Identities=18% Similarity=0.004 Sum_probs=33.7
Q ss_pred hHHHHHHhcceEEeecCCeEEEEEEeeCCCCCCHHHHHHH
Q 019862 220 TDAGFVLGTGKVLLKVPPTLRFVLDGEMPDYLLAKDLILQ 259 (334)
Q Consensus 220 td~a~~l~tG~~wlkvPetvrV~l~G~L~~gV~aKDliL~ 259 (334)
.+++..+--.+-|.-+...|.|.|+-.=..|++.+|++|.
T Consensus 53 a~~Ae~~~HHPdi~~~y~~V~v~l~THd~gGlT~~D~~lA 92 (104)
T 2v6u_A 53 ALYADKVDHHPNWYNVYNTVDVELSTHDAAGLTEKDFALA 92 (104)
T ss_dssp HHHHHHHTCCCEEEEETTEEEEEECBGGGTBCCHHHHHHH
T ss_pred HHHHHHhCCCCcEEEeCCEEEEEEEeCCCCCCCHHHHHHH
Confidence 4566677778889999999999997766779999999985
Done!