Query 019865
Match_columns 334
No_of_seqs 144 out of 1581
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 05:09:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019865.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019865hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 5E-40 1.1E-44 306.0 31.8 311 1-318 10-331 (358)
2 PRK11272 putative DMT superfam 100.0 2.9E-34 6.4E-39 262.4 28.3 277 6-318 10-288 (292)
3 PRK11689 aromatic amino acid e 100.0 3.8E-34 8.3E-39 261.9 25.6 284 2-318 2-290 (295)
4 PRK11453 O-acetylserine/cystei 100.0 8.1E-34 1.8E-38 260.3 27.7 280 4-318 4-290 (299)
5 PRK15430 putative chlorampheni 100.0 5.2E-32 1.1E-36 247.9 24.9 274 2-314 6-284 (296)
6 TIGR00950 2A78 Carboxylate/Ami 100.0 7.2E-32 1.6E-36 242.4 25.2 257 16-310 1-259 (260)
7 PRK10532 threonine and homoser 100.0 9.4E-32 2E-36 245.9 25.8 273 2-316 10-282 (293)
8 TIGR03340 phn_DUF6 phosphonate 100.0 2.1E-28 4.7E-33 222.5 26.1 273 6-312 3-280 (281)
9 TIGR00817 tpt Tpt phosphate/ph 100.0 1.6E-28 3.4E-33 225.7 25.4 269 20-318 18-296 (302)
10 TIGR00688 rarD rarD protein. T 100.0 3.9E-27 8.5E-32 211.4 24.5 250 3-290 1-255 (256)
11 PTZ00343 triose or hexose phos 99.9 1.7E-25 3.8E-30 209.0 26.2 269 17-316 62-349 (350)
12 COG0697 RhaT Permeases of the 99.9 1.7E-24 3.6E-29 196.9 27.6 278 3-316 6-288 (292)
13 PF06027 DUF914: Eukaryotic pr 99.9 7.1E-24 1.5E-28 194.0 27.1 284 12-316 21-306 (334)
14 TIGR00776 RhaT RhaT L-rhamnose 99.9 1.4E-22 3.1E-27 184.7 22.3 273 5-314 2-287 (290)
15 COG5006 rhtA Threonine/homoser 99.9 2.1E-21 4.6E-26 165.6 21.3 273 5-318 13-288 (292)
16 COG2962 RarD Predicted permeas 99.9 1.2E-20 2.7E-25 165.1 25.7 276 3-316 6-284 (293)
17 KOG4510 Permease of the drug/m 99.9 2.3E-22 4.9E-27 172.6 5.5 287 6-319 40-329 (346)
18 KOG2765 Predicted membrane pro 99.8 3.5E-18 7.5E-23 153.6 14.1 229 71-318 161-393 (416)
19 PF08449 UAA: UAA transporter 99.8 9.2E-16 2E-20 141.0 26.4 265 33-319 32-301 (303)
20 COG2510 Predicted membrane pro 99.6 2.5E-15 5.5E-20 115.5 10.9 135 4-145 3-137 (140)
21 COG2510 Predicted membrane pro 99.6 2.5E-14 5.5E-19 110.0 12.9 136 177-315 4-139 (140)
22 KOG2766 Predicted membrane pro 99.6 5.9E-16 1.3E-20 132.5 3.7 276 17-324 32-308 (336)
23 PF00892 EamA: EamA-like trans 99.6 1.7E-14 3.6E-19 114.4 10.0 123 14-145 1-124 (126)
24 PF00892 EamA: EamA-like trans 99.5 8.3E-14 1.8E-18 110.4 7.7 125 186-314 1-125 (126)
25 PF04142 Nuc_sug_transp: Nucle 99.5 7.3E-12 1.6E-16 111.0 18.8 230 65-306 13-244 (244)
26 KOG1441 Glucose-6-phosphate/ph 99.5 7.1E-13 1.5E-17 120.3 12.1 272 22-322 35-314 (316)
27 KOG2234 Predicted UDP-galactos 99.4 1.5E-10 3.3E-15 104.8 25.6 297 6-319 17-326 (345)
28 TIGR00950 2A78 Carboxylate/Ami 99.3 5.3E-11 1.1E-15 106.8 15.0 130 3-142 127-259 (260)
29 PF13536 EmrE: Multidrug resis 99.3 3.1E-11 6.8E-16 94.4 9.0 102 38-146 2-105 (113)
30 PF06800 Sugar_transport: Suga 99.2 2.2E-09 4.7E-14 95.3 21.2 226 62-312 36-268 (269)
31 KOG1580 UDP-galactose transpor 99.2 1E-09 2.2E-14 93.4 15.9 220 72-312 88-310 (337)
32 PRK11272 putative DMT superfam 99.1 3.1E-09 6.7E-14 97.2 15.9 134 4-146 150-284 (292)
33 PRK15430 putative chlorampheni 99.1 7.3E-10 1.6E-14 101.5 11.5 140 173-315 5-145 (296)
34 PRK10532 threonine and homoser 99.1 5.1E-09 1.1E-13 95.8 15.9 133 4-147 148-281 (293)
35 KOG1581 UDP-galactose transpor 99.1 1.5E-08 3.2E-13 89.7 17.6 264 32-318 50-316 (327)
36 KOG1444 Nucleotide-sugar trans 99.0 2.4E-07 5.1E-12 83.1 24.2 288 6-323 14-308 (314)
37 TIGR03340 phn_DUF6 phosphonate 99.0 2.5E-09 5.3E-14 97.3 12.0 134 178-316 3-136 (281)
38 PRK11689 aromatic amino acid e 99.0 9.2E-09 2E-13 94.2 15.1 130 5-146 157-286 (295)
39 PLN00411 nodulin MtN21 family 99.0 2.1E-08 4.5E-13 94.0 16.5 135 5-147 190-328 (358)
40 TIGR00688 rarD rarD protein. T 99.0 5.5E-09 1.2E-13 93.7 10.8 137 176-315 2-142 (256)
41 PRK02971 4-amino-4-deoxy-L-ara 98.9 5.6E-09 1.2E-13 83.2 9.2 122 176-318 2-125 (129)
42 PRK13499 rhamnose-proton sympo 98.9 8.3E-07 1.8E-11 81.9 23.8 295 4-315 7-341 (345)
43 KOG3912 Predicted integral mem 98.9 6.4E-08 1.4E-12 84.7 14.0 279 16-315 15-334 (372)
44 PF03151 TPT: Triose-phosphate 98.8 2.6E-08 5.7E-13 81.9 10.5 137 177-314 1-152 (153)
45 KOG1443 Predicted integral mem 98.8 2E-07 4.4E-12 82.6 15.4 254 33-314 45-314 (349)
46 PRK11453 O-acetylserine/cystei 98.8 1.8E-07 3.9E-12 85.8 15.5 135 4-145 143-285 (299)
47 KOG4314 Predicted carbohydrate 98.8 2.3E-08 5E-13 83.1 8.2 214 79-321 63-282 (290)
48 TIGR00817 tpt Tpt phosphate/ph 98.7 9E-08 2E-12 87.9 11.0 136 4-146 145-292 (302)
49 PF13536 EmrE: Multidrug resis 98.7 2.5E-08 5.3E-13 78.0 6.0 108 211-319 3-110 (113)
50 PF03151 TPT: Triose-phosphate 98.7 7E-07 1.5E-11 73.4 14.1 134 5-144 1-150 (153)
51 PF05653 Mg_trans_NIPA: Magnes 98.6 2.3E-07 4.9E-12 84.8 10.9 229 74-320 54-297 (300)
52 TIGR00803 nst UDP-galactose tr 98.5 4.5E-07 9.7E-12 79.6 9.5 202 98-312 7-221 (222)
53 TIGR00776 RhaT RhaT L-rhamnose 98.5 1.8E-06 3.9E-11 78.9 13.7 128 3-145 151-286 (290)
54 PRK15051 4-amino-4-deoxy-L-ara 98.5 2.6E-07 5.6E-12 71.8 6.4 67 249-315 43-109 (111)
55 PTZ00343 triose or hexose phos 98.5 4.2E-06 9.1E-11 78.5 15.5 136 4-145 194-346 (350)
56 COG0697 RhaT Permeases of the 98.5 5E-06 1.1E-10 75.2 15.6 130 4-145 154-285 (292)
57 PRK15051 4-amino-4-deoxy-L-ara 98.5 2E-06 4.3E-11 66.8 10.8 66 74-145 41-107 (111)
58 COG4975 GlcU Putative glucose 98.5 2.4E-08 5.3E-13 85.8 -0.8 273 4-313 2-283 (288)
59 COG2962 RarD Predicted permeas 98.3 3.3E-06 7.2E-11 74.9 9.6 137 175-314 6-143 (293)
60 KOG1442 GDP-fucose transporter 98.3 4E-06 8.7E-11 73.4 9.2 262 32-318 60-330 (347)
61 COG5070 VRG4 Nucleotide-sugar 98.2 1.9E-05 4.1E-10 67.2 11.1 252 34-311 38-293 (309)
62 PRK02971 4-amino-4-deoxy-L-ara 98.2 4.1E-05 8.9E-10 61.0 12.5 116 4-145 2-120 (129)
63 KOG1583 UDP-N-acetylglucosamin 98.2 4.4E-05 9.5E-10 67.1 12.9 218 81-315 76-314 (330)
64 COG5006 rhtA Threonine/homoser 98.0 0.0001 2.2E-09 64.2 12.2 131 3-143 147-278 (292)
65 PF06027 DUF914: Eukaryotic pr 98.0 0.00017 3.8E-09 66.7 13.5 137 3-147 167-305 (334)
66 KOG2922 Uncharacterized conser 97.9 1.1E-05 2.3E-10 72.5 4.6 227 74-320 68-311 (335)
67 KOG1582 UDP-galactose transpor 97.9 5.5E-05 1.2E-09 66.3 8.5 259 29-316 69-333 (367)
68 PF06800 Sugar_transport: Suga 97.9 0.00016 3.4E-09 64.6 11.3 114 3-124 137-250 (269)
69 PRK10452 multidrug efflux syst 97.7 0.00014 3E-09 57.0 6.8 66 250-315 37-103 (120)
70 PF04657 DUF606: Protein of un 97.7 0.00052 1.1E-08 55.4 10.4 131 178-312 3-138 (138)
71 PRK10650 multidrug efflux syst 97.7 0.00025 5.5E-09 54.5 7.8 62 252-313 44-106 (109)
72 PRK09541 emrE multidrug efflux 97.7 0.00017 3.7E-09 55.7 6.8 66 250-315 37-103 (110)
73 PRK11431 multidrug efflux syst 97.6 0.00026 5.5E-09 54.2 6.6 65 250-314 36-101 (105)
74 COG2076 EmrE Membrane transpor 97.5 0.00029 6.4E-09 53.4 5.7 64 252-315 39-103 (106)
75 PF08449 UAA: UAA transporter 97.5 0.0033 7.1E-08 57.8 13.7 136 5-146 155-296 (303)
76 PF10639 UPF0546: Uncharacteri 97.3 0.00075 1.6E-08 52.1 6.6 108 10-144 2-111 (113)
77 PRK10650 multidrug efflux syst 97.3 0.0063 1.4E-07 46.8 10.9 60 80-145 46-106 (109)
78 PF05653 Mg_trans_NIPA: Magnes 97.2 0.00065 1.4E-08 62.2 5.8 119 172-314 3-121 (300)
79 KOG4510 Permease of the drug/m 97.1 0.00036 7.7E-09 61.2 3.4 134 4-146 191-324 (346)
80 PRK09541 emrE multidrug efflux 97.1 0.0029 6.2E-08 48.9 7.8 65 75-145 35-101 (110)
81 PF04657 DUF606: Protein of un 97.1 0.0097 2.1E-07 48.0 11.1 127 9-144 6-138 (138)
82 PRK10452 multidrug efflux syst 97.1 0.0025 5.4E-08 50.0 7.3 65 76-146 36-102 (120)
83 COG3238 Uncharacterized protei 97.1 0.0067 1.4E-07 49.2 9.7 140 175-317 4-148 (150)
84 PF00893 Multi_Drug_Res: Small 97.0 0.0023 4.9E-08 48.0 6.1 55 252-306 38-93 (93)
85 COG2076 EmrE Membrane transpor 97.0 0.0032 7E-08 47.8 6.9 60 80-145 41-101 (106)
86 PRK11431 multidrug efflux syst 96.9 0.0058 1.3E-07 46.7 7.7 60 80-145 40-100 (105)
87 KOG1441 Glucose-6-phosphate/ph 96.8 0.0043 9.3E-08 56.9 7.5 137 2-145 161-305 (316)
88 PRK13499 rhamnose-proton sympo 96.5 0.12 2.7E-06 48.0 14.6 143 3-146 173-340 (345)
89 PF00893 Multi_Drug_Res: Small 96.3 0.045 9.7E-07 40.9 8.9 52 80-137 40-92 (93)
90 PF10639 UPF0546: Uncharacteri 95.9 0.023 5E-07 43.9 5.6 109 183-313 3-112 (113)
91 COG4975 GlcU Putative glucose 95.6 0.0052 1.1E-07 53.5 1.4 132 177-318 3-139 (288)
92 PF06379 RhaT: L-rhamnose-prot 95.6 1.9 4E-05 39.9 21.7 296 4-313 7-338 (344)
93 TIGR00803 nst UDP-galactose tr 95.4 0.081 1.8E-06 46.1 8.1 64 74-143 157-220 (222)
94 KOG1581 UDP-galactose transpor 95.1 0.3 6.6E-06 44.1 10.8 134 4-145 172-311 (327)
95 PF07857 DUF1632: CEO family ( 95.1 0.51 1.1E-05 42.1 12.2 136 5-151 1-138 (254)
96 COG3238 Uncharacterized protei 95.0 0.46 1E-05 38.6 10.6 130 8-145 9-144 (150)
97 KOG2765 Predicted membrane pro 94.9 0.24 5.1E-06 46.0 9.6 136 3-146 246-389 (416)
98 KOG2922 Uncharacterized conser 93.5 0.023 5.1E-07 51.4 0.3 119 170-313 15-134 (335)
99 KOG1444 Nucleotide-sugar trans 93.3 1 2.2E-05 41.0 10.4 138 3-146 156-299 (314)
100 KOG4314 Predicted carbohydrate 93.0 0.037 8.1E-07 46.6 0.8 63 256-318 66-128 (290)
101 PF04142 Nuc_sug_transp: Nucle 92.8 0.12 2.5E-06 46.0 3.6 63 255-317 29-91 (244)
102 KOG1443 Predicted integral mem 91.7 4.3 9.4E-05 36.9 12.1 136 4-145 164-313 (349)
103 KOG1580 UDP-galactose transpor 91.7 0.44 9.6E-06 41.5 5.7 129 9-145 177-311 (337)
104 COG5070 VRG4 Nucleotide-sugar 90.4 1.9 4.2E-05 37.4 8.2 136 5-146 156-295 (309)
105 KOG4831 Unnamed protein [Funct 89.5 7.7 0.00017 29.4 9.8 116 6-145 5-123 (125)
106 PF04342 DUF486: Protein of un 83.8 0.89 1.9E-05 34.3 2.3 32 284-315 77-108 (108)
107 PRK02237 hypothetical protein; 81.9 4 8.6E-05 31.1 5.1 42 273-314 63-104 (109)
108 KOG1442 GDP-fucose transporter 79.7 0.98 2.1E-05 40.3 1.4 74 257-330 116-189 (347)
109 KOG4831 Unnamed protein [Funct 79.0 5.5 0.00012 30.2 5.0 58 256-313 65-123 (125)
110 PF06379 RhaT: L-rhamnose-prot 75.0 16 0.00036 33.9 7.9 138 173-315 4-153 (344)
111 COG3169 Uncharacterized protei 74.9 5 0.00011 29.9 3.7 34 282-315 82-115 (116)
112 KOG1582 UDP-galactose transpor 73.8 34 0.00073 30.9 9.2 111 29-145 216-330 (367)
113 PF02694 UPF0060: Uncharacteri 72.5 8 0.00017 29.4 4.4 42 273-314 61-102 (107)
114 KOG3912 Predicted integral mem 63.1 1.1E+02 0.0024 27.9 10.2 135 5-145 177-332 (372)
115 PRK02237 hypothetical protein; 59.0 12 0.00027 28.5 3.2 35 105-145 69-103 (109)
116 PF02694 UPF0060: Uncharacteri 58.2 10 0.00022 28.8 2.6 36 104-145 66-101 (107)
117 COG4657 RnfA Predicted NADH:ub 56.8 69 0.0015 26.4 7.2 84 113-223 89-184 (193)
118 PF07168 Ureide_permease: Urei 46.9 11 0.00024 34.4 1.4 112 9-122 1-125 (336)
119 PF07698 7TM-7TMR_HD: 7TM rece 39.5 2.3E+02 0.0049 23.7 18.4 26 97-122 59-85 (194)
120 KOG2234 Predicted UDP-galactos 38.3 3.4E+02 0.0074 25.4 12.9 133 4-145 183-320 (345)
121 PF04342 DUF486: Protein of un 37.4 1.9E+02 0.004 22.1 8.1 68 71-144 31-105 (108)
122 PRK11902 ampG muropeptide tran 37.0 3.5E+02 0.0077 25.2 11.4 23 297-319 370-392 (402)
123 COG1742 Uncharacterized conser 34.8 61 0.0013 24.6 3.5 42 273-314 62-103 (109)
124 PF07857 DUF1632: CEO family ( 34.3 1.2E+02 0.0027 27.0 6.1 50 177-228 1-50 (254)
125 TIGR02865 spore_II_E stage II 34.3 5.8E+02 0.012 26.9 15.6 44 96-145 11-54 (764)
126 COG1742 Uncharacterized conser 29.8 32 0.0007 26.0 1.4 33 107-145 70-102 (109)
127 PF07168 Ureide_permease: Urei 28.5 65 0.0014 29.5 3.3 130 182-314 2-145 (336)
128 PF05297 Herpes_LMP1: Herpesvi 27.8 20 0.00043 32.3 0.0 36 86-121 40-76 (381)
129 COG3086 RseC Positive regulato 27.4 32 0.0007 27.7 1.1 25 266-290 71-95 (150)
130 PF11139 DUF2910: Protein of u 27.3 3.9E+02 0.0086 22.8 10.9 65 81-145 127-209 (214)
131 PRK10862 SoxR reducing system 24.8 99 0.0021 25.3 3.6 29 89-117 68-96 (154)
132 TIGR01167 LPXTG_anchor LPXTG-m 24.5 50 0.0011 19.0 1.3 22 296-317 11-32 (34)
133 COG1575 MenA 1,4-dihydroxy-2-n 23.9 5.7E+02 0.012 23.5 12.6 47 213-260 124-170 (303)
134 PF03595 SLAC1: Voltage-depend 23.3 4.9E+02 0.011 23.7 8.5 73 131-220 6-86 (330)
135 COG3086 RseC Positive regulato 22.6 1.4E+02 0.0031 24.2 3.9 35 89-124 68-102 (150)
136 KOG2766 Predicted membrane pro 21.2 1.8E+02 0.0039 26.2 4.6 131 4-145 166-297 (336)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=5e-40 Score=306.00 Aligned_cols=311 Identities=39% Similarity=0.631 Sum_probs=250.1
Q ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHH
Q 019865 1 MGASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSC 80 (334)
Q Consensus 1 ~~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 80 (334)
|+.|+|+.|+...++.+...++.|.+++.+++|..+.++|+.+++++++++.+.++|+++.++.+++++.+..+.|++++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999987654433324456777888888999887
Q ss_pred HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHH------hhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCC
Q 019865 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIF------RMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPIT 154 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~------~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~ 154 (334)
.++.++++|++|+|+++++++.++.|+++.++++++ +|||++++ +++|++++++|+.++...+++...
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~ 163 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVF 163 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCcccc
Confidence 777899999999999999999999999999999999 58888888 999999999999998554442211
Q ss_pred CCCCCcccc---ccc-ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCC
Q 019865 155 SAPSKNKLI---NEL-VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKN 230 (334)
Q Consensus 155 ~~~~~~~~~---~~~-~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~ 230 (334)
..++++..+ +.. ....+.++..|+++.+.++++|++|++.+|+..+++++....++++..++++...+.++..+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~ 243 (358)
T PLN00411 164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKN 243 (358)
T ss_pred cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 100000000 000 0112234567999999999999999999999999987456777888888888777777665542
Q ss_pred -CCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhh
Q 019865 231 -PNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQ 309 (334)
Q Consensus 231 -~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g 309 (334)
...|....+.....++|.++. +.++|.+|+|++++.||++++++.+++|+++++++++++||++++.+++|+++|+.|
T Consensus 244 ~~~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~G 322 (358)
T PLN00411 244 NPSVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLG 322 (358)
T ss_pred CcccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 223332223345567788875 668999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhH
Q 019865 310 FLRINKVEI 318 (334)
Q Consensus 310 ~~l~~~~~~ 318 (334)
+++..+.++
T Consensus 323 v~l~~~~~~ 331 (358)
T PLN00411 323 FYAVMWGKA 331 (358)
T ss_pred HHHHHhhhh
Confidence 999875443
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=262.38 Aligned_cols=277 Identities=17% Similarity=0.164 Sum_probs=230.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHH
Q 019865 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQM 84 (334)
Q Consensus 6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~ 84 (334)
++.++...++||++++++|.+. +++||..++++|+.+++++++++...+++ + ..+++++.+....|.++ ..++.
T Consensus 10 ~~~~~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~~~-~---~~~~~~~~~~~~~g~~~~~~~~~ 84 (292)
T PRK11272 10 FGALFALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLRGH-P---LPTLRQWLNAALIGLLLLAVGNG 84 (292)
T ss_pred HHHHHHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHhCC-C---CCcHHHHHHHHHHHHHHHHHHHH
Confidence 4567788999999999999854 58999999999999999998888654322 1 12455667778888887 78889
Q ss_pred HHHHHh-hccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccc
Q 019865 85 FHYFGI-ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI 163 (334)
Q Consensus 85 ~~~~al-~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~ 163 (334)
+++++. +++++++++++.++.|+++.+++.+ +|||++++ +++|++++++|+.++.. ++
T Consensus 85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~------------- 143 (292)
T PRK11272 85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GG------------- 143 (292)
T ss_pred HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Cc-------------
Confidence 999999 9999999999999999999999985 69999999 99999999999998731 11
Q ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhh
Q 019865 164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELM 243 (334)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~ 243 (334)
..+....|+++.++++++||.|.+..||..++ + +...+.+++.++++...+.....+.++.. ..+...|.
T Consensus 144 ------~~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 213 (292)
T PRK11272 144 ------NLSGNPWGAILILIASASWAFGSVWSSRLPLP-V-GMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFL 213 (292)
T ss_pred ------ccccchHHHHHHHHHHHHHHHHHHHHHhcCCC-c-chHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHH
Confidence 01123579999999999999999999987643 2 45567788888888888877654433211 11224788
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 244 AIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 244 ~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
.+++.++++++++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++.+.+++
T Consensus 214 ~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 214 ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999998876554
No 3
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=3.8e-34 Score=261.91 Aligned_cols=284 Identities=11% Similarity=0.024 Sum_probs=215.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-H
Q 019865 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C 80 (334)
Q Consensus 2 ~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 80 (334)
+.|+++.++.++++||++++.+|.+. +++||..+.++|+.++++++.++. ++++. ++.+ ++....+.++ +
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~-~~~~----~~~~~~~~l~~~ 72 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV---GFPRL-RQFP----KRYLLAGGLLFV 72 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc---ccccc-cccc----HHHHHHHhHHHH
Confidence 67889999999999999999999964 689999999999999999887653 11111 1111 2233445555 7
Q ss_pred HHHHHHHHHhhc----cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCC
Q 019865 81 CGQMFHYFGIEN----GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA 156 (334)
Q Consensus 81 ~~~~~~~~al~~----~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~ 156 (334)
.++.+++.++++ +++++++++.++.|+++.+++++++|||++++ +++|++++++|+.++. .+++....
T Consensus 73 ~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~-~~~~~~~~- 144 (295)
T PRK11689 73 SYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVL-GGDNGLSL- 144 (295)
T ss_pred HHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhhee-cCCccchh-
Confidence 888888888764 67888999999999999999999999999999 9999999999999883 21110000
Q ss_pred CCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccc
Q 019865 157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRL 236 (334)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~ 236 (334)
.+ .+....+...|+++++.++++||.|++..||..++.+ +.... ...+++.+.+.....+.++..++
T Consensus 145 ------~~--~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~---~~~~~~~l~~~~~~~~~~~~~~~- 211 (295)
T PRK11689 145 ------AE--LINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF---FILTALALWIKYFLSPQPAMVFS- 211 (295)
T ss_pred ------hh--hhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH---HHHHHHHHHHHHHHhcCccccCC-
Confidence 00 0001112356999999999999999999999987765 65432 22333334443333222211121
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 237 ~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
...|..+++.++ +++++|.+|++++|+.++++++.+.+++|+++++++++++||++++.+++|+++|+.|+++....
T Consensus 212 --~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 212 --LPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred --HHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 236777788885 89999999999999999999999999999999999999999999999999999999999887655
Q ss_pred hH
Q 019865 317 EI 318 (334)
Q Consensus 317 ~~ 318 (334)
++
T Consensus 289 ~~ 290 (295)
T PRK11689 289 TR 290 (295)
T ss_pred Hh
Confidence 54
No 4
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=8.1e-34 Score=260.31 Aligned_cols=280 Identities=16% Similarity=0.072 Sum_probs=218.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (334)
+..+..++++++||++++++|.+. +++||..+.++|+.++++.+.++. .+ ++.+++ .....|.+. ..+
T Consensus 4 ~~~l~~l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~---~~----~~~~~~---~~~~~g~~~~~~~ 72 (299)
T PRK11453 4 KDGVLALLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFV---AR----PKVPLN---LLLGYGLTISFGQ 72 (299)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHh---cC----CCCchH---HHHHHHHHHHHHH
Confidence 445668889999999999999965 579999999999999887666543 11 112222 334445555 566
Q ss_pred HHHHHHHhhc-cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 019865 83 QMFHYFGIEN-GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK 161 (334)
Q Consensus 83 ~~~~~~al~~-~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~ 161 (334)
+.+++.+++| .++++++++.++.|+++.+++++++|||++++ +++|++++++|+.++. ..+.
T Consensus 73 ~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~-~~~~---------- 135 (299)
T PRK11453 73 FAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLI-EDSL---------- 135 (299)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhc-cccC----------
Confidence 6788899998 58899999999999999999999999999999 9999999999999883 1110
Q ss_pred cccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCch--HHHHHHHHHHHHHHHHHHHHhccCCC---Ccccc
Q 019865 162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAE--LMVTLICSIFVTILSSAVSLVAEKNP---NAWRL 236 (334)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~--~~~~~~~~l~~~i~~~~~~l~~~~~~---~~~~~ 236 (334)
+ ..+....|+++++.++++|+.|++..|+..++.+++ .....+....+.+.....+...+++. ..+..
T Consensus 136 ------~-~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (299)
T PRK11453 136 ------N-GQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVT 208 (299)
T ss_pred ------C-CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhcc
Confidence 0 112224799999999999999999999987654422 34445556665554554444444321 11111
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 237 RPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 237 ~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
.+...|..++|.++++++++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.
T Consensus 209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 22347889999999999999999999999999999999999999999999999999999999999999999999987765
Q ss_pred hH
Q 019865 317 EI 318 (334)
Q Consensus 317 ~~ 318 (334)
++
T Consensus 289 ~~ 290 (299)
T PRK11453 289 LR 290 (299)
T ss_pred hh
Confidence 54
No 5
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=5.2e-32 Score=247.93 Aligned_cols=274 Identities=14% Similarity=0.083 Sum_probs=205.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCC-CCC-CcHHHHHHHHHHHHHH
Q 019865 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRT-PPQ-LTWSIVCRIFLLGLLS 79 (334)
Q Consensus 2 ~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~~~ 79 (334)
+.|+++++++++++||.+++..|. . +++||.++.++|+.++.+++.++...+++.+. .++ .+++++. ....+.++
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~-~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 82 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKL-I-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAVL 82 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHH-h-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHHH
Confidence 467899999999999999999998 4 47999999999999999888777654322110 001 1233322 33355555
Q ss_pred -HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 019865 80 -CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS 158 (334)
Q Consensus 80 -~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~ 158 (334)
+.++.++++|++++|+++++++.++.|+++.+++++++|||++++ +++|++++++|+.++...
T Consensus 83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~---------- 146 (296)
T PRK15430 83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWT---------- 146 (296)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHH----------
Confidence 889999999999999999999999999999999999999999999 999999999999998311
Q ss_pred CcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 019865 159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLR 237 (334)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~ 237 (334)
.++. ..+.++++++|+.|++..|+..++.. +....+.+...++.+...+.. +.+...+..
T Consensus 147 -----------~~~~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~- 207 (296)
T PRK15430 147 -----------FGSL----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTSHMGQ- 207 (296)
T ss_pred -----------cCCc----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcccccC-
Confidence 0111 14688899999999999988754321 123334455555544332221 111111111
Q ss_pred CCch-hhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 238 PDIE-LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 238 ~~~~-~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
.+.. +..+.+.|+ .+.++|.+|++++++.++++++++.+++|+++.+++++++||++++.+++|+++|+.|+.+..
T Consensus 208 ~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 208 NPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 1112 233344555 688999999999999999999999999999999999999999999999999999977665544
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=7.2e-32 Score=242.44 Aligned_cols=257 Identities=18% Similarity=0.179 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccC
Q 019865 16 DVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGS 94 (334)
Q Consensus 16 wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~ 94 (334)
||.+++..|.+.+++.||....++|+..+.+++.+....+ + +++++.+....|.++ ++++.++++|++|++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~----~----~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~ 72 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR----P----PLKRLLRLLLLGALQIGVFYVLYFVAVKRLP 72 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc----c----CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999777789999999999999988887765321 1 233446777888888 999999999999999
Q ss_pred chhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcch
Q 019865 95 PALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNW 174 (334)
Q Consensus 95 ~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (334)
+++++++.++.|+++.+++.+++|||++++ ++.|+.++++|+.++. .++ +.+..
T Consensus 73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~-~~~-------------------~~~~~ 126 (260)
T TIGR00950 73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLL-SDG-------------------NLSIN 126 (260)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhc-cCC-------------------ccccc
Confidence 999999999999999999999999999999 9999999999999973 111 11233
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHH
Q 019865 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAV 253 (334)
Q Consensus 175 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t 253 (334)
..|+++++.++++|+.+.+..|+..++.+. +...+.+++.++.++..+.....++.+ .. +...+..+++.+++++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence 689999999999999999999999877651 234445778888888888876554322 11 2346777889999999
Q ss_pred HHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhH
Q 019865 254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQF 310 (334)
Q Consensus 254 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~ 310 (334)
+++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999886
No 7
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=9.4e-32 Score=245.91 Aligned_cols=273 Identities=13% Similarity=0.037 Sum_probs=217.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHH
Q 019865 2 GASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCC 81 (334)
Q Consensus 2 ~~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 81 (334)
+.+++.++++++++|+.++.+.|.+.+ +.||..+.++|+++++++++++... ++ ++.++++++.....|++...
T Consensus 10 ~~~~~~~~~la~~~~~~~~~~~K~~~~-~~~~~~~~~~R~~~a~l~l~~~~~~--~~---~~~~~~~~~~~~~~g~~~~~ 83 (293)
T PRK10532 10 VWLPILLLLIAMASIQSGASLAKSLFP-LVGAPGVTALRLALGTLILIAIFKP--WR---LRFAKEQRLPLLFYGVSLGG 83 (293)
T ss_pred cchHHHHHHHHHHHHHhhHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHHhH--Hh---ccCCHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999664 6999999999999999888776422 11 12345566677788887777
Q ss_pred HHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcc
Q 019865 82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNK 161 (334)
Q Consensus 82 ~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~ 161 (334)
.+.+++++++|+|++.++++.++.|+++.+++ +|+++ +..++.++++|+.++. ..+..
T Consensus 84 ~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--------~~~~~~i~~~Gv~li~-~~~~~--------- 141 (293)
T PRK10532 84 MNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--------DFVWVVLAVLGLWFLL-PLGQD--------- 141 (293)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--------HHHHHHHHHHHHheee-ecCCC---------
Confidence 78899999999999999999999999998876 35443 3455778899998873 11110
Q ss_pred cccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCch
Q 019865 162 LINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIE 241 (334)
Q Consensus 162 ~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~ 241 (334)
.++....|+++.++++++|+.|++..|+..++.+ +... .++.+++++...+.....+.. ..++ ...
T Consensus 142 --------~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~-~~~~---~~~ 207 (293)
T PRK10532 142 --------VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE-ALWH---WSI 207 (293)
T ss_pred --------cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc-ccCC---HHH
Confidence 1122357999999999999999999999987776 6665 456677777777776544321 1111 124
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 242 ~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
+..++|.|+++++++|.+|++++++.++++++.+.++||+++.+++++++||++++.+++|+++|+.|+......
T Consensus 208 ~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 208 LPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 556679999999999999999999999999999999999999999999999999999999999999988877643
No 8
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.97 E-value=2.1e-28 Score=222.50 Aligned_cols=273 Identities=14% Similarity=0.107 Sum_probs=201.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFY-RKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (334)
Q Consensus 6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (334)
+...+.++++|+..++..|... ++.++ ..+++...+++.+.|+...+. ++.+ ++.+++.+......+..+..++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~-~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHA-DKEPD--FLWWALLAHSVLLTPYGLWYLAQVGW-SRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcC-CchhH--HHHHHHHHHHHHHHHHHHHhcccCCC-CCcchhhHHHHHHHHHHHHHHHH
Confidence 4567889999999999999633 33344 357777778777877765432 2222 22233333344444444499999
Q ss_pred HHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCccccc
Q 019865 85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN 164 (334)
Q Consensus 85 ~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~ 164 (334)
++++|++++++++++.+.++.|+++.+++++++|||++++ +++|+.+++.|+.++.. ++
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~-------------- 137 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SR-------------- 137 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-cc--------------
Confidence 9999999999999999999999999999999999999999 99999999999998732 11
Q ss_pred ccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchH----HHHHHHHHHHHHHHHHHHHhccCCCCcccccCCc
Q 019865 165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAEL----MVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDI 240 (334)
Q Consensus 165 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~----~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~ 240 (334)
..+....|+.+++.++++|+.|++..|+..++.+ +. ..+.+++...+....+.....+..+ .. .++.
T Consensus 138 -----~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 208 (281)
T TIGR03340 138 -----FAQHRRKAYAWALAAALGTAIYSLSDKAAALGVP-AFYSALGYLGIGFLAMGWPFLLLYLKRHGRS--MF-PYAR 208 (281)
T ss_pred -----ccccchhHHHHHHHHHHHHHHhhhhccccccchh-cccccHHHHHHHHHHHHHHHHHHHHHHhccc--hh-hhHH
Confidence 0111246888999999999999999887654443 22 1223333332222222221112111 11 1122
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865 241 ELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR 312 (334)
Q Consensus 241 ~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l 312 (334)
.+...++.+.+.+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++
T Consensus 209 ~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 209 QILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 455677888889999999999999999999999999999999999999999999999999999999999875
No 9
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=1.6e-28 Score=225.72 Aligned_cols=269 Identities=12% Similarity=0.088 Sum_probs=210.4
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhh
Q 019865 20 NTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALAS 99 (334)
Q Consensus 20 ~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~ 99 (334)
.+.-|.++++--+|..+.++|+..+.+.+.+... .+.+++ ++.+++++++....|++++.++.+.+++++|+++++++
T Consensus 18 ~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~s~s~~~ 95 (302)
T TIGR00817 18 NIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKR-LKISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTH 95 (302)
T ss_pred HHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3567886643367999999999999877655521 122222 45677888899999999988899999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHH
Q 019865 100 AMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGI 179 (334)
Q Consensus 100 ~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 179 (334)
++.++.|+++.+++++++|||++++ ++.|++++++|+.+.. .. +.+....|++
T Consensus 96 li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~---~~------------------~~~~~~~G~~ 148 (302)
T TIGR00817 96 TIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS---DT------------------ELSFNWAGFL 148 (302)
T ss_pred HHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc---CC------------------cccccHHHHH
Confidence 9999999999999999999999999 9999999999998652 10 1122357999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--hCCchHHHHHHHHHHHHHHHHHHHHhccCCCC---cccc----cCC-chhhHHHHHH
Q 019865 180 FLAAHSVILAIYYIVQAWIVR--DYPAELMVTLICSIFVTILSSAVSLVAEKNPN---AWRL----RPD-IELMAIGYSA 249 (334)
Q Consensus 180 ~~l~aa~~~a~~~v~~~~~~~--~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~---~~~~----~~~-~~~~~ll~~g 249 (334)
++++++++|++|++..||..+ +++ +...+.++...+++.+.|.....|+.+. ++.. ... ..+...++.+
T Consensus 149 ~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (302)
T TIGR00817 149 SAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAA 227 (302)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHH
Confidence 999999999999999999887 676 8999999999999999998876654211 1110 000 0111122222
Q ss_pred HHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 250 IFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 250 i~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
+......+.++++++++.+|++.+...+++|++++++|++++||++++.+++|+++++.|+++.++.|+
T Consensus 228 ~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 228 MGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 222222224556899999999999999999999999999999999999999999999999999887654
No 10
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.96 E-value=3.9e-27 Score=211.41 Aligned_cols=250 Identities=10% Similarity=0.042 Sum_probs=185.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCC-cHHHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKR----TPPQL-TWSIVCRIFLLGL 77 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~----~~~~~-~~~~~~~~~~~g~ 77 (334)
.|++..++.++++||.++++.|. .. ++||.++.++|++++++++.++...+++++ +.++. +++.+..+...|+
T Consensus 1 ~~g~~~~i~a~~~wg~~~~~~k~-~~-~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 1 FKGIIVSLLASFLFGYMYYYSKL-LK-PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHH-hc-cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 36899999999999999999998 44 699999999999999988877765433211 10111 1222344667777
Q ss_pred HHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCC
Q 019865 78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAP 157 (334)
Q Consensus 78 ~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~ 157 (334)
+.+.++.++++|++++++++++++.++.|+++++++++++|||++++ ++++++++++|+.++...
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~--------- 143 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVL--------- 143 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHH---------
Confidence 77999999999999999999999999999999999999999999999 999999999999987321
Q ss_pred CCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCccccc
Q 019865 158 SKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLR 237 (334)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~ 237 (334)
.++. ..+++.++++|+.|.+..|+..++ + ....... .+...+...+.... ++++......
T Consensus 144 ------------~~~~----~~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~ 203 (256)
T TIGR00688 144 ------------KGSL----PWEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLLQ-TDFATVQQTN 203 (256)
T ss_pred ------------cCCc----hHHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHHH-hccCcccccC
Confidence 0111 135788999999999999887543 2 2222111 12222222222111 1111111111
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHH
Q 019865 238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF 290 (334)
Q Consensus 238 ~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~ 290 (334)
+..+|..+++.|+. +.++|.+|++++++.++++++++.|++|+++.+++.++
T Consensus 204 ~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 204 PFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred chhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 12367888888875 88999999999999999999999999999999999764
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.95 E-value=1.7e-25 Score=208.99 Aligned_cols=269 Identities=14% Similarity=0.118 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019865 17 VGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQL--TWSIVCRIFLLGLLSCCGQMFHYFGIENG 93 (334)
Q Consensus 17 g~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~al~~~ 93 (334)
.......|.++ +++| |..+..+|++++.++..++... +.+++ ++. .+++++.....|+++.......+.|++++
T Consensus 62 ~~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~-~~~~~-~~~~~~~~~~~~llp~gl~~~~~~~~~~~sl~~~ 138 (350)
T PTZ00343 62 VLYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWAT-GFRKI-PRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLG 138 (350)
T ss_pred HHHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34456678755 5699 9999999999998875555332 22222 333 23466788899999944456677999999
Q ss_pred CchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcc
Q 019865 94 SPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSN 173 (334)
Q Consensus 94 ~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (334)
+++.+.++..+.|+++++++++++|||++++ ++.++++++.|+.+.+. + +.+.
T Consensus 139 svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~-------------------~~~~ 191 (350)
T PTZ00343 139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K-------------------ELHF 191 (350)
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c-------------------cchh
Confidence 9999999999999999999999999999999 99999999999999731 1 1122
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhCC------chHHHHHHHHHHHHHHHHHHHHhccCCC--Ccc----cccCCch
Q 019865 174 WTIGGIFLAAHSVILAIYYIVQAWIVRDYP------AELMVTLICSIFVTILSSAVSLVAEKNP--NAW----RLRPDIE 241 (334)
Q Consensus 174 ~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~------~~~~~~~~~~l~~~i~~~~~~l~~~~~~--~~~----~~~~~~~ 241 (334)
...|++++++++++|+.|++..|+..++.+ ++.....++...++++..|+....|... ..+ .......
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 367999999999999999999999876532 2555666678899999999887665421 111 0001112
Q ss_pred hhHHHHHHHHHHHHHHHHHHH----HhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 242 LMAIGYSAIFAVSVRSVFHTW----ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 242 ~~~ll~~gi~~t~~~~~l~~~----al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
+..+++. ++.+++.|.+|+. ++++.+|.+.+...++.|+++++++++++||++++.+++|+++++.|+++.+..
T Consensus 272 ~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 272 KGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 3344454 5577999999995 999999999999999999999999999999999999999999999999988754
No 12
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=1.7e-24 Score=196.88 Aligned_cols=278 Identities=21% Similarity=0.242 Sum_probs=212.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-H
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRG-ASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-C 80 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~-~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~ 80 (334)
.+.....++..+.|+.+....|... ++ .++....+.|...+.+...+.....+...+ +...+ +++....+.++ .
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~ 81 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR-PALRP--WLLLLLLALLGLA 81 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHhhccccc-ccccc--hHHHHHHHHHHHH
Confidence 3456777888899999999999954 44 677777788999998874433321110011 11111 34556666666 9
Q ss_pred HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHH-HHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019865 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAI-IFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSK 159 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~-~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~ 159 (334)
.++.+++.++++++++.++.+.++.|+++.+++. +++|||++++ ++.++++++.|++++.. .+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~-~~~-------- 146 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL-GGG-------- 146 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec-CCC--------
Confidence 9999999999999999999999999999999997 6779999999 99999999999999832 110
Q ss_pred cccccccccCCCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHHhccCCCCccccc
Q 019865 160 NKLINELVQLPLSN-WTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL-ICSIFVTILSSAVSLVAEKNPNAWRLR 237 (334)
Q Consensus 160 ~~~~~~~~~~~~~~-~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~l~~~~~~~~~~~~ 237 (334)
.+.. ...|+.+++.++++|+.+.+..|+.. +.+ +..... +++........+.. ..+.+ ...
T Consensus 147 ----------~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~ 209 (292)
T COG0697 147 ----------GGGILSLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFF-LSGFG----API 209 (292)
T ss_pred ----------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHH-hcccc----ccC
Confidence 0111 46899999999999999999999887 554 555554 44442222222222 11111 111
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 238 PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 238 ~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
....+..+.+.|+++++++|.+|.+++++.++++++++.+++|+++.+++++++||++++.+++|+.+++.|+.+..++
T Consensus 210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 210 LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 1236888889999999999999999999999999999999999999999999999999999999999999999988876
No 13
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.93 E-value=7.1e-24 Score=194.02 Aligned_cols=284 Identities=15% Similarity=0.159 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Q 019865 12 LEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGI 90 (334)
Q Consensus 12 ~~~~wg~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al 90 (334)
.+++=..+.+.+....+++.+ |..-.++-+..-.++..++..+++++++..+..++++++.++.|++...++.+...|+
T Consensus 21 lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~ 100 (334)
T PF06027_consen 21 LSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAY 100 (334)
T ss_pred HHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 344445555555542334444 5555555555555555555554433211122234556788889999999999999999
Q ss_pred hccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCC
Q 019865 91 ENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLP 170 (334)
Q Consensus 91 ~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (334)
+||+.+.+.++..++-+++++++++++|||.++. |++|+++++.|+.++...+.... +++.+
T Consensus 101 ~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~------------~~~~~ 162 (334)
T PF06027_consen 101 QYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSG------------SDSSS 162 (334)
T ss_pred hcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccc------------ccCCC
Confidence 9999999999999999999999999999999999 99999999999998854321110 01123
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCC-CcccccCCchhhHHHHHH
Q 019865 171 LSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP-NAWRLRPDIELMAIGYSA 249 (334)
Q Consensus 171 ~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~-~~~~~~~~~~~~~ll~~g 249 (334)
.++..+||++++.+++.||+++++.++..|+.+ ......+..+++.++..+...+.|.+. ...+ ++..........
T Consensus 163 ~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~--w~~~~~~~~v~~ 239 (334)
T PF06027_consen 163 GSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIH--WTSQVIGLLVGY 239 (334)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccC--CChhhHHHHHHH
Confidence 455689999999999999999999999999987 888999999999999998887777642 1121 222222232223
Q ss_pred HHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 250 IFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 250 i~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
.++...-|.+....++..+|+..++......+++++++++++||++++.+++|.++|+.|+++.+..
T Consensus 240 ~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 240 ALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 3466677888899999999999999999999999999999999999999999999999999988743
No 14
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.91 E-value=1.4e-22 Score=184.71 Aligned_cols=273 Identities=15% Similarity=0.126 Sum_probs=206.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (334)
+++..++++++||++.+..|. .. +.++.++. |..++.+++..+....+++++ ..++.+...++.|.+...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~-~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~---~~~~~~~~g~l~G~~w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVK-IG-GGPYSQTL--GTTFGALILSIAIAIFVLPEF---WALSIFLVGLLSGAFWALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhc-cC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc---cccHHHHHHHHHHHHHHhhhh
Confidence 577889999999999999998 44 78888775 788888877766555432111 124444456666666688999
Q ss_pred HHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccch----hhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019865 85 FHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAK----SFGTVLLIGGALIVTLYKGLPITSAPSK 159 (334)
Q Consensus 85 ~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~----~~g~~l~l~Gv~ll~~~~~~~~~~~~~~ 159 (334)
+++.++++++.+.+..+.+ ++|++..+++.+++|||.+++ + .+|+++.++|+.++...+++
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~-------- 140 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDK-------- 140 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEecccc--------
Confidence 9999999999999999988 888999999999999999999 8 99999999998887321100
Q ss_pred cccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH---HHHHHHHHHHHHHHHhccCCCCcccc
Q 019865 160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL---ICSIFVTILSSAVSLVAEKNPNAWRL 236 (334)
Q Consensus 160 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~---~~~l~~~i~~~~~~l~~~~~~~~~~~ 236 (334)
...+.+..+..+|.++.+.++++|+.|.+..|+. +++ |.+.++ +.++.++.+..+.. . ...+ +.
T Consensus 141 -----~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~--~~- 207 (290)
T TIGR00776 141 -----SAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGH-I-LAKP--LK- 207 (290)
T ss_pred -----ccccccccchhhHHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHH-h-cccc--hH-
Confidence 0000000234679999999999999999999976 455 777743 33444444333322 1 1111 11
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEeccchHHHHHHHHHHHHhCCcccchhh----hhhHHHHhhHH
Q 019865 237 RPDIELMAIGYSAIFAVSVRSVFHTWALR-KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRC----VCMILRGLQFL 311 (334)
Q Consensus 237 ~~~~~~~~ll~~gi~~t~~~~~l~~~al~-~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~----iG~~lIi~g~~ 311 (334)
++..+..++ .|++ ..+++.+|..+.+ +.++++.+.+.+++|+.+.+++++++||+.++.++ +|+++|+.|+.
T Consensus 208 -~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~ 284 (290)
T TIGR00776 208 -KYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAAN 284 (290)
T ss_pred -HHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHH
Confidence 122344444 8887 7999999999999 99999999999999999999999999999999999 99999999988
Q ss_pred hhh
Q 019865 312 RIN 314 (334)
Q Consensus 312 l~~ 314 (334)
+..
T Consensus 285 l~~ 287 (290)
T TIGR00776 285 ILG 287 (290)
T ss_pred HHh
Confidence 764
No 15
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.89 E-value=2.1e-21 Score=165.59 Aligned_cols=273 Identities=14% Similarity=0.064 Sum_probs=215.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (334)
|+.+++.+.+.-=....+.|. +-+..+|...+.+|..++++.+.++.. ..+ .+.+++++......|...+..|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~-LFP~vG~~g~t~lRl~~aaLIll~l~R----Pwr-~r~~~~~~~~~~~yGvsLg~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKS-LFPLVGAAGVTALRLAIAALILLALFR----PWR-RRLSKPQRLALLAYGVSLGGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHH-HccccChhhHHHHHHHHHHHHHHHHhh----HHH-hccChhhhHHHHHHHHHHHHHHH
Confidence 577777777766666777887 557899999999999999998887742 222 35667777899999998888899
Q ss_pred HHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCccccc
Q 019865 85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLIN 164 (334)
Q Consensus 85 ~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~ 164 (334)
+||.++++.|.+.+..+.++-|+...+++. +| .+ +.+-+.+.+.|+.++. ..++.
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~------d~vwvaLAvlGi~lL~-p~~~~------------ 141 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LR------DFVWVALAVLGIWLLL-PLGQS------------ 141 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hh------hHHHHHHHHHHHHhhe-eccCC------------
Confidence 999999999999999999999998887753 22 23 6666778888988882 21111
Q ss_pred ccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhH
Q 019865 165 ELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMA 244 (334)
Q Consensus 165 ~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ 244 (334)
.......|..+.+.++.+|+.|.+..+|..+..+ ....+...+.+++++..|+.....++ .-++ +.-...
T Consensus 142 -----~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~-~l~~---p~ll~l 211 (292)
T COG5006 142 -----VWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP-ALFS---PSLLPL 211 (292)
T ss_pred -----cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch-hhcC---hHHHHH
Confidence 1223478999999999999999999999876554 67778889999999999998643332 1121 123444
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHH---hhhhhhH
Q 019865 245 IGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFL---RINKVEI 318 (334)
Q Consensus 245 ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~---l~~~~~~ 318 (334)
-+..+++++.+.|.+=..+++|.++...+.+..+||.++.+.+++++||.+|+.|++|...|+.+.. +..|++.
T Consensus 212 aLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~ 288 (292)
T COG5006 212 ALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA 288 (292)
T ss_pred HHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence 5678999999999999999999999999999999999999999999999999999999998886543 4444443
No 16
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.89 E-value=1.2e-20 Score=165.06 Aligned_cols=276 Identities=12% Similarity=0.077 Sum_probs=219.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC--CCcHHHHHHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP--QLTWSIVCRIFLLGLLSC 80 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~ 80 (334)
.|+++..+.+.++||..+...|. + ++.|+.++...|..-+..++..+....++++... ..+++.+....+.+.+-+
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kl-l-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~ 83 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKL-L-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG 83 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-H-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 58999999999999999999999 4 4799999999999999988877766654432201 123444555656666669
Q ss_pred HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCc
Q 019865 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKN 160 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~ 160 (334)
.++..|.||.++-..-++++=++.+|++.++++.+++|||+++- |++++.++.+||.......|
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g---------- 147 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLG---------- 147 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcC----------
Confidence 99999999999999999999999999999999999999999999 99999999999999854322
Q ss_pred ccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccc-cCC
Q 019865 161 KLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRL-RPD 239 (334)
Q Consensus 161 ~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~-~~~ 239 (334)
+-. ...+.-+++|+.|-...|+. +.+ +.+..+...+.-.+......+..+..++ ... ...
T Consensus 148 ----------~lp-----wval~la~sf~~Ygl~RK~~--~v~-a~~g~~lE~l~l~p~al~yl~~l~~~~~-~~~~~~~ 208 (293)
T COG2962 148 ----------SLP-----WVALALALSFGLYGLLRKKL--KVD-ALTGLTLETLLLLPVALIYLLFLADSGQ-FLQQNAN 208 (293)
T ss_pred ----------CCc-----HHHHHHHHHHHHHHHHHHhc--CCc-hHHhHHHHHHHHhHHHHHHHHHHhcCch-hhhcCCc
Confidence 122 24555678999999776654 333 5566666666666655555555544332 111 123
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 240 IELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 240 ~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
..+..+...|. .|+++..+|..+-|+++-+..+.++|++|..-.+++.+++||+++..+....+.|-.|+.+..-+
T Consensus 209 ~~~~LLv~aG~-vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d 284 (293)
T COG2962 209 SLWLLLVLAGL-VTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID 284 (293)
T ss_pred hHHHHHHHhhH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35666777787 78899999999999999999999999999999999999999999999999999999998887644
No 17
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.86 E-value=2.3e-22 Score=172.55 Aligned_cols=287 Identities=14% Similarity=0.133 Sum_probs=208.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHH
Q 019865 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMF 85 (334)
Q Consensus 6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 85 (334)
.....+. ..+....+..+... +.+|.+..-.|++.-.+.-.|...+.+....-|+ ..| .++.++|+.|..+..+
T Consensus 40 l~l~~vs-~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~-g~R--~~LiLRg~mG~tgvml 113 (346)
T KOG4510|consen 40 LLLLTVS-YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPE-GKR--KWLILRGFMGFTGVML 113 (346)
T ss_pred ceehhhH-HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEEEeeeeecCC-CcE--EEEEeehhhhhhHHHH
Confidence 3334444 45555555555523 5899999999966555544444333222221122 222 3677899999888889
Q ss_pred HHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccc
Q 019865 86 HYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINE 165 (334)
Q Consensus 86 ~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~ 165 (334)
.||+++|.|.+.|.++..++|+++.+++|.++||+.++. ..++..+.+.|+++++ .+ +..-++++
T Consensus 114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv---RP------pFlFG~~t 178 (346)
T KOG4510|consen 114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV---RP------PFLFGDTT 178 (346)
T ss_pred HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe---cC------CcccCCCc
Confidence 999999999999999999999999999999999999999 9999999999999983 11 11111111
Q ss_pred c--ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccC-Cchh
Q 019865 166 L--VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP-DIEL 242 (334)
Q Consensus 166 ~--~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~-~~~~ 242 (334)
. ..+..+....|...++.+++..|--.++.|+..|+.+ ......+..+++.+...+.-...+ ++..+. ..++
T Consensus 179 ~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig----~~~lP~cgkdr 253 (346)
T KOG4510|consen 179 EGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG----AVQLPHCGKDR 253 (346)
T ss_pred cccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc----ceecCccccce
Confidence 1 1111233456788888888888888889999988886 544455555666655544433322 122211 2366
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHH
Q 019865 243 MAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIM 319 (334)
Q Consensus 243 ~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~ 319 (334)
+.++.+|++ ..+++.+...++|+-.+..+++..+.+.+++.+|..+++||.|+++.+.|+++|+++.+.+..+|..
T Consensus 254 ~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa 329 (346)
T KOG4510|consen 254 WLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWA 329 (346)
T ss_pred EEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHh
Confidence 677778884 4678999999999999999999999999999999999999999999999999999988877766654
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.78 E-value=3.5e-18 Score=153.62 Aligned_cols=229 Identities=16% Similarity=0.183 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcC
Q 019865 71 RIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKG 150 (334)
Q Consensus 71 ~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~ 150 (334)
..+....+...+++++..|+++++++...++.+++.+|+..++.++..||++.. |.++.++++.|+++++..+
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~~~- 233 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTMGD- 233 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEecc-
Confidence 344444455999999999999999999999999999999999999999999999 9999999999999985321
Q ss_pred CCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC---chHHHHHHHHHHHHHHHHHHHHhc
Q 019865 151 LPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP---AELMVTLICSIFVTILSSAVSLVA 227 (334)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~l~~ 227 (334)
... ..+........|+++++++|+.||+|+++.||...+.+ |....-.+..++..++++|...+.
T Consensus 234 s~~------------~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL 301 (416)
T KOG2765|consen 234 SKQ------------NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIIL 301 (416)
T ss_pred ccc------------cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 110 01112334588999999999999999999999877653 233344455566666677655544
Q ss_pred cC-CCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHH
Q 019865 228 EK-NPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILR 306 (334)
Q Consensus 228 ~~-~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lI 306 (334)
.. ..+.++.+.......++..++++++++-++|.+|+--.+|..++.-..++.+.+++.+.++=|..+++.+++|.+.|
T Consensus 302 ~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~I 381 (416)
T KOG2765|consen 302 DFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPI 381 (416)
T ss_pred HHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHH
Confidence 32 12344555555677788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhHHhhhhhhH
Q 019865 307 GLQFLRINKVEI 318 (334)
Q Consensus 307 i~g~~l~~~~~~ 318 (334)
++|.+.++...+
T Consensus 382 fv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 382 FVGFVIVNISSE 393 (416)
T ss_pred HHHHhheecccc
Confidence 999999886544
No 19
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.75 E-value=9.2e-16 Score=141.00 Aligned_cols=265 Identities=11% Similarity=0.099 Sum_probs=203.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHH
Q 019865 33 HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFIL 112 (334)
Q Consensus 33 p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~ll 112 (334)
|..+++..+....+.-.+.....+++. .++..+++....+.+..++..+-+.+++|.|...-.++-++.|+.++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~ 107 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKFPK----SRKIPLKKYAILSFLFFLASVLSNAALKYISYPTQIVFKSSKPIPVMIL 107 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccC----CCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence 888999999988877666654433111 1222335667778888899999999999999999999999999999999
Q ss_pred HHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHH
Q 019865 113 AIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYY 192 (334)
Q Consensus 113 a~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~ 192 (334)
+.+++|+|.+++ +++++++..+|+.+....+..... ..+....++..|+++.+.+.++.+...
T Consensus 108 ~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~-----------~~~~~~~~~~~G~~ll~~sl~~~a~~~ 170 (303)
T PF08449_consen 108 GVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSS-----------SSNSSSFSSALGIILLLLSLLLDAFTG 170 (303)
T ss_pred HHHhcCccccHH------HHHHHHHHHhhHheeeeccccccc-----------ccccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999998543211110 011112223449999999999999999
Q ss_pred HHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHh--ccCCCCccc--ccCCchhhHHHHHHHHHHHHHHHHHHHHhccC
Q 019865 193 IVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLV--AEKNPNAWR--LRPDIELMAIGYSAIFAVSVRSVFHTWALRKK 267 (334)
Q Consensus 193 v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~--~~~~~~~~~--~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~ 267 (334)
+.+++..++++ ++.+.+++..+++.+...+.... .++..+.++ ...+..+..++... +...+++....+..++.
T Consensus 171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s-~~~~~g~~~i~~~~~~~ 249 (303)
T PF08449_consen 171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFS-LTGALGQFFIFYLIKKF 249 (303)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHhc
Confidence 99999987654 37888899999999888877766 332211111 11122333343333 36667788888899999
Q ss_pred CceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHH
Q 019865 268 GPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIM 319 (334)
Q Consensus 268 ~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~ 319 (334)
+|...+....+.-+.+++++.+++|+++++.++.|.++++.|..+....|++
T Consensus 250 ~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k 301 (303)
T PF08449_consen 250 SALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK 301 (303)
T ss_pred CchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999888766554
No 20
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.64 E-value=2.5e-15 Score=115.48 Aligned_cols=135 Identities=14% Similarity=0.172 Sum_probs=121.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (334)
...++.+++++.||...++.|... ++.||...++.|..+..+++..+....++.+.....+.+.+..+.+.|+.+++.+
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glsw 81 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHH
Confidence 456788999999999999999965 6899999999999999999999988777655433456777788889998889999
Q ss_pred HHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 84 ~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
++||.|++...++....+..++|+++.+++++++|||++.+ +|+|+.+..+|++++
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailv 137 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeE
Confidence 99999999999999999999999999999999999999999 999999999999886
No 21
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.60 E-value=2.5e-14 Score=110.00 Aligned_cols=136 Identities=18% Similarity=0.149 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHH
Q 019865 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR 256 (334)
Q Consensus 177 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~ 256 (334)
-.++++++++.+++..+..|-..++.| |..-+..+..+..+....+....++.... ....+..|..++..|+ .++++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHH-HHHHH
Confidence 368899999999999999999988887 98899999999888888877666653211 1123558888999995 99999
Q ss_pred HHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 257 SVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 257 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
..+|++|+++.+++++.++....|+++.+++++++||++|..+++|+++|.+|.++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999987764
No 22
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.59 E-value=5.9e-16 Score=132.46 Aligned_cols=276 Identities=12% Similarity=0.080 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Q 019865 17 VGLNTVTKAAMSRGA-SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSP 95 (334)
Q Consensus 17 g~~~~~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~ 95 (334)
+......-.+ ..+. .|..-.|.-..+-++.-.+++.++++ . -+.+ |++.+++|+...-++++...|.|||+.
T Consensus 32 ~~a~tss~la-~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~-~--~~~~---~~hYilla~~DVEaNy~vV~AyQyTsm 104 (336)
T KOG2766|consen 32 STAFTSSELA-RKGINAPTSQTFLNYVLLALVYGPIMLFRRK-Y--IKAK---WRHYILLAFVDVEANYFVVKAYQYTSM 104 (336)
T ss_pred cchhhhHHHH-hccCCCccHHHHHHHHHHHHHHhhHHHhhhH-H--HHHH---HHHhhheeEEeecccEEEeeehhhcch
Confidence 3334444442 3333 46677788888888888888876442 1 1223 346788888888888889999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchh
Q 019865 96 ALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWT 175 (334)
Q Consensus 96 ~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (334)
..+.++..-.-+.+.+++|+++|.|.++. |+.|.++|+.|+.++++. +.++++..++.+-.
T Consensus 105 tSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~s-------------DV~agd~aggsnp~ 165 (336)
T KOG2766|consen 105 TSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFS-------------DVHAGDRAGGSNPV 165 (336)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEe-------------eeccccccCCCCCc
Confidence 99999999998999999999999999999 999999999999998542 22232333456668
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHH
Q 019865 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV 255 (334)
Q Consensus 176 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~ 255 (334)
+||++.+++|.+||+.++....+.|+.+ ..+.+....++|+++..+- .+.+.+. ..+..++..... .....++..+
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ-~i~~~~~-~~tl~w~~~i~~-yl~f~L~MFl 241 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQ-FIFERHH-VSTLHWDSAIFL-YLRFALTMFL 241 (336)
T ss_pred cCcEEEEecceeeeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHH-Hhhhccc-eeeEeehHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999999997 8889999999999988887 4555432 112212212222 2224456666
Q ss_pred HHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHHhhhhh
Q 019865 256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVC 324 (334)
Q Consensus 256 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~~~~~~ 324 (334)
=|.+.-..+|..+++..+........+++++ -.||-..+|...+....+..|+.+...|++..|+.+
T Consensus 242 lYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~r 308 (336)
T KOG2766|consen 242 LYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEELR 308 (336)
T ss_pred HHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhhc
Confidence 6777778899999999999999999999999 567888999999999999999988875554444433
No 23
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.57 E-value=1.7e-14 Score=114.43 Aligned_cols=123 Identities=22% Similarity=0.312 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhc
Q 019865 14 FLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIEN 92 (334)
Q Consensus 14 ~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~ 92 (334)
++||...+..|... ++.||....++|+..+.+ +.+.....+++.. ++.+.+++......|.++ ..++.++++++++
T Consensus 1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLILGRKPF-KNLSPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhhccccc-cCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 47999999999954 569999999999999997 6666555554432 455667777888899997 9999999999999
Q ss_pred cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 93 GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 93 ~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
++++.++.+.++.|+++.+++++++||+++++ +++|+++.+.|++++
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLI 124 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999999987
No 24
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.48 E-value=8.3e-14 Score=110.37 Aligned_cols=125 Identities=18% Similarity=0.270 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhc
Q 019865 186 VILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALR 265 (334)
Q Consensus 186 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~ 265 (334)
++|+.+.+..|+..++.+ +...+.+++..+++ ..+.....+..+ ....+...+....+.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 468899999999999987 99999999999998 666665555432 11122346777888888889999999999999
Q ss_pred cCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 266 KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 266 ~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
+.++++++.+.+++|+++.++++++++|++++.+++|+++++.|+++++
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764
No 25
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.46 E-value=7.3e-12 Score=111.02 Aligned_cols=230 Identities=11% Similarity=0.129 Sum_probs=164.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHH
Q 019865 65 TWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (334)
Q Consensus 65 ~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l 144 (334)
++++..+..+-+++.++.+.+.|.++++.+++.-.++.++-.+++++++.+++|+|++++ ||+++.+.++|+.+
T Consensus 13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~l 86 (244)
T PF04142_consen 13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVVL 86 (244)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHhe
Confidence 456678899999999999999999999999999999999999999999999999999999 99999999999998
Q ss_pred HHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHH
Q 019865 145 VTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAV 223 (334)
Q Consensus 145 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~ 223 (334)
+....... .+....+....+.++.+...|.++.+.++++-++..++..|..|+.+. ....+....+.|.++..+.
T Consensus 87 v~~~~~~~----~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~ 162 (244)
T PF04142_consen 87 VQLSSSQS----SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLA 162 (244)
T ss_pred eecCCccc----cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHH
Confidence 73211110 000000001011123456889999999999999999999999888642 4555566667777766666
Q ss_pred HHhccCCC-CcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhh
Q 019865 224 SLVAEKNP-NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVC 302 (334)
Q Consensus 224 ~l~~~~~~-~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG 302 (334)
....+... .+...- ..+-...+..++...++=.+....+|+.+...=+....+..+.+.+.+++++|.+++...++|
T Consensus 163 ~~~~~~~~~~~~g~f--~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg 240 (244)
T PF04142_consen 163 LLLSDGSAISESGFF--HGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG 240 (244)
T ss_pred HhcccccccccCCch--hhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence 54443321 111100 111112222333344444455566788888777888888999999999999999999999999
Q ss_pred hHHH
Q 019865 303 MILR 306 (334)
Q Consensus 303 ~~lI 306 (334)
+.++
T Consensus 241 ~~~V 244 (244)
T PF04142_consen 241 AALV 244 (244)
T ss_pred eecC
Confidence 8754
No 26
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.45 E-value=7.1e-13 Score=120.33 Aligned_cols=272 Identities=11% Similarity=0.086 Sum_probs=204.1
Q ss_pred HHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhh
Q 019865 22 VTKAAMS--RGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALAS 99 (334)
Q Consensus 22 ~~k~~~~--~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~ 99 (334)
..|..+. +---|..++..+...+.+.+.....++..+.. +..++..+...+-+|++.+++..+-..++.+.|++...
T Consensus 35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~-~~~~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q 113 (316)
T KOG1441|consen 35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPS-KISSKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQ 113 (316)
T ss_pred eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCC-ccccccchHHHHHHHHHHHHHHHhcchhhhccchhHHH
Confidence 3455444 22347788888888887776666555443332 22233455677788888899999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHH
Q 019865 100 AMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGI 179 (334)
Q Consensus 100 ~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 179 (334)
.+=.+.|+++.++++++.+|+.+.+ .++.++....|+.+-+. ++.+-+..|.+
T Consensus 114 ~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~---------------------~e~~fn~~G~i 166 (316)
T KOG1441|consen 114 TIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV---------------------TELSFNLFGFI 166 (316)
T ss_pred HHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee---------------------ccccccHHHHH
Confidence 9999999999999999999999999 89888888888887631 12334578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh--hCC-chHHHHHHHHHHHHHHHH-HHHHhccCCCCc-ccc-cCCchhhHHHHHHHHHH
Q 019865 180 FLAAHSVILAIYYIVQAWIVR--DYP-AELMVTLICSIFVTILSS-AVSLVAEKNPNA-WRL-RPDIELMAIGYSAIFAV 253 (334)
Q Consensus 180 ~~l~aa~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~l~~~i~~~-~~~l~~~~~~~~-~~~-~~~~~~~~ll~~gi~~t 253 (334)
.++++.+..+..+++.++..+ +.+ +++....++.-.+.+.++ |.....|++... +.. .++......++.. +..
T Consensus 167 ~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~ 245 (316)
T KOG1441|consen 167 SAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLA 245 (316)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHH
Confidence 999999999999999999984 221 388888888888888888 877665553220 010 1122233333333 222
Q ss_pred HHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHHhhh
Q 019865 254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNF 322 (334)
Q Consensus 254 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~~~~ 322 (334)
..-....++.+++.+|.+.++.+.+--++.++.++++++|+.++.+..|+++-+.|+++.++-|.+.++
T Consensus 246 f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 246 FLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 233345567889999999999999999999999999999999999999999999999999987776443
No 27
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.5e-10 Score=104.76 Aligned_cols=297 Identities=12% Similarity=0.085 Sum_probs=206.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHHHHHHhhcc--CC-CCCC------cHHHHHHHH
Q 019865 6 TAAMVTLEFLDVGLNTVTKAAMSRG---ASHFILVVYSNTLAIFLLVPSSFIFYRK--RT-PPQL------TWSIVCRIF 73 (334)
Q Consensus 6 ~~~~l~~~~~wg~~~~~~k~~~~~~---~~p~~~~~~R~~~a~l~l~~~~~~~~~~--~~-~~~~------~~~~~~~~~ 73 (334)
+..+++..+-++......|.+...+ +.|...++.--.+-.++.....+...|+ ++ .+++ .+++..+..
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~ 96 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS 96 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence 5567777888999999999865555 6677888777777776666665554322 11 0111 244567888
Q ss_pred HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCC
Q 019865 74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPI 153 (334)
Q Consensus 74 ~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~ 153 (334)
+-+++.++.+-++|.++.+.+++.-.+..++--+.|+++..+++++|++++ ||.++++..+|+.++-....+..
T Consensus 97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCCCCC
Confidence 889999888889999999999999999999999999999999999999999 99999999999999831111100
Q ss_pred CCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 019865 154 TSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPN 232 (334)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~~~~~ 232 (334)
++.......+...|....+.++..-++..++..+..|+-+. .+..+.-..++|.++.+...+..+....
T Consensus 171 ----------~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i 240 (345)
T KOG2234|consen 171 ----------GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAI 240 (345)
T ss_pred ----------CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 01112234566889999999999999999999999887543 3444555556666655555544433211
Q ss_pred cccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865 233 AWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR 312 (334)
Q Consensus 233 ~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l 312 (334)
.|. .--..+-...+..++..+++=.+-..-+|+.+-..=+....+..+++.+.++.++|-+||...++|..+++.++.+
T Consensus 241 ~~~-gff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~l 319 (345)
T KOG2234|consen 241 NEY-GFFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFL 319 (345)
T ss_pred ccC-CccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHH
Confidence 111 0011222222333333333333333444555555445556678899999999999999999999999999999999
Q ss_pred hhhhhHH
Q 019865 313 INKVEIM 319 (334)
Q Consensus 313 ~~~~~~~ 319 (334)
.+..+..
T Consensus 320 Y~~~P~~ 326 (345)
T KOG2234|consen 320 YSLYPAR 326 (345)
T ss_pred hhcCCcc
Confidence 9854443
No 28
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.31 E-value=5.3e-11 Score=106.80 Aligned_cols=130 Identities=17% Similarity=0.171 Sum_probs=110.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASH--FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS- 79 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p--~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 79 (334)
.+++...+.++++|+......|.. .++.+| .....+|+.++.+.+.++....+++ +..+.+++......+.++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRL-VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPN---PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHH-hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHH
Confidence 457888999999999999999994 445664 4555688999999888887654332 223556666778888888
Q ss_pred HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHH
Q 019865 80 CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGA 142 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv 142 (334)
..++.++++++++.+++.++.+.++.|+++.++++++++|+++.+ ++.|+.+.+.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999 999999999886
No 29
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.25 E-value=3.1e-11 Score=94.44 Aligned_cols=102 Identities=23% Similarity=0.398 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccCC-CCCCcHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHH
Q 019865 38 VYSNTLAIFLLVPSSFIFYRKRT-PPQLTWSIVCRIFLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAII 115 (334)
Q Consensus 38 ~~R~~~a~l~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~ 115 (334)
.+|++.+.+++..+...+++.+. .+..+.+.+.+....|.++ ..++.++++|+++.+ +.++.+.+++|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 58999999998888777543211 0122334445667778888 699999999999999 58889999999999999999
Q ss_pred HhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 116 FRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 116 ~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
++|||++++ ++.+++++++|++++.
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~ 105 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIA 105 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHh
Confidence 999999999 9999999999999994
No 30
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.25 E-value=2.2e-09 Score=95.26 Aligned_cols=226 Identities=16% Similarity=0.128 Sum_probs=154.7
Q ss_pred CCCcH--HHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHH
Q 019865 62 PQLTW--SIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLL 138 (334)
Q Consensus 62 ~~~~~--~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~ 138 (334)
|..+. +.+...++.|++...++...|.++++.+.+.+..+.. .+-+.+.+++.++++|.-+.+.+. .-.+++++.
T Consensus 36 p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~--~G~~Al~li 113 (269)
T PF06800_consen 36 PAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKI--IGFLALVLI 113 (269)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHH--HHHHHHHHH
Confidence 44543 7778888999999999999999999999999999975 667788899999999998877111 123477777
Q ss_pred HHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH
Q 019865 139 IGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTI 218 (334)
Q Consensus 139 l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i 218 (334)
++|+.+.+..+.+ .+..++.++...|....+++.+.|..|.+..|.. +.+ +.....=+.+--.+
T Consensus 114 iiGv~lts~~~~~-------------~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~--~~~-~~~~~lPqaiGm~i 177 (269)
T PF06800_consen 114 IIGVILTSYQDKK-------------SDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF--HVS-GWSAFLPQAIGMLI 177 (269)
T ss_pred HHHHHHhcccccc-------------ccccccccchhhHHHHHHHHHHHHHHHHHHHHhc--CCC-hhHhHHHHHHHHHH
Confidence 8888776332111 1111124556789999999999999999997763 343 55554433333222
Q ss_pred HHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccch
Q 019865 219 LSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLG 298 (334)
Q Consensus 219 ~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~ 298 (334)
...++....+....+ +..+..+ ..|+ .=.++=.++..+.++.|.+..-.+.-+.++++.+.+.+++||+-+..
T Consensus 178 ~a~i~~~~~~~~~~~-----k~~~~ni-l~G~-~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 178 GAFIFNLFSKKPFFE-----KKSWKNI-LTGL-IWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHhhcccccccc-----cchHHhh-HHHH-HHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 223333222221111 1122222 2232 22346677888999999999999999999999999999999998865
Q ss_pred ----hhhhhHHHHhhHHh
Q 019865 299 ----RCVCMILRGLQFLR 312 (334)
Q Consensus 299 ----~~iG~~lIi~g~~l 312 (334)
.++|.++++.|.++
T Consensus 251 e~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 251 EMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHHHHHHHHHHHHhhhc
Confidence 45677777777654
No 31
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1e-09 Score=93.44 Aligned_cols=220 Identities=12% Similarity=0.100 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCC
Q 019865 72 IFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL 151 (334)
Q Consensus 72 ~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~ 151 (334)
...+..-..+++..-..|+|+.|=-...+--+.-|+=+++++..+.+++.+++ +..-.++.++|+.+. .++.+
T Consensus 88 YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~------kY~cVL~IV~GValF-mYK~~ 160 (337)
T KOG1580|consen 88 YAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWR------KYCCVLMIVVGVALF-MYKEN 160 (337)
T ss_pred HHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHH------HHHHHHHHHHHHHHh-hcccc
Confidence 33444444777788889999998777777777889999999999999999999 999999999999987 55432
Q ss_pred CCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCC
Q 019865 152 PITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKN 230 (334)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~ 230 (334)
--. ..++++...|.++.+++-.--++....+.|..+.+. ....++....+++.+.+..-.++++..
T Consensus 161 Kv~-------------g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGEl 227 (337)
T KOG1580|consen 161 KVG-------------GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGEL 227 (337)
T ss_pred ccC-------------CCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhH
Confidence 211 123456688999999887777777778888776654 256778888899998777766666543
Q ss_pred C--CcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHh
Q 019865 231 P--NAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGL 308 (334)
Q Consensus 231 ~--~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~ 308 (334)
+ ..+....+..|.-+...++ ++++++++.+.-+...||-.-|+++...-.++++.+.++++.+++..|++|.+++++
T Consensus 228 weF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~ 306 (337)
T KOG1580|consen 228 WEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFS 306 (337)
T ss_pred HHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHH
Confidence 2 1222233445666667776 888999999999999999999999999999999999999999999999999999998
Q ss_pred hHHh
Q 019865 309 QFLR 312 (334)
Q Consensus 309 g~~l 312 (334)
++..
T Consensus 307 aL~~ 310 (337)
T KOG1580|consen 307 ALTA 310 (337)
T ss_pred Hhhh
Confidence 8764
No 32
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.10 E-value=3.1e-09 Score=97.22 Aligned_cols=134 Identities=13% Similarity=0.007 Sum_probs=111.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (334)
.+.++.+.++++|+......|. .. ..++.....+++..+++.+.++....+.... ...+.+.+......+.++ ..+
T Consensus 150 ~G~l~~l~a~~~~a~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 150 WGAILILIASASWAFGSVWSSR-LP-LPVGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cC-CCcchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHHH
Confidence 4778889999999999999998 33 3345667788999998888777654332211 112445667778888888 899
Q ss_pred HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
+.+|++++++.+++.++.+.++.|++++++++++++|+++.. +++|+++.+.|+++..
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 9999999999999874
No 33
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.10 E-value=7.3e-10 Score=101.55 Aligned_cols=140 Identities=14% Similarity=0.080 Sum_probs=110.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcc-cccCCchhhHHHHHHHH
Q 019865 173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAW-RLRPDIELMAIGYSAIF 251 (334)
Q Consensus 173 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~-~~~~~~~~~~ll~~gi~ 251 (334)
+..+|.++.+.++++|+...+..|.. .+.+ |.+.++++++++.+++.+......+.+... ...+...+ .....+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKI-FMLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHH-HHHHHHHH
Confidence 44689999999999999999999765 5676 999999999999987776654332211100 00011122 22335566
Q ss_pred HHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 252 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
..+..+.++++++++.+++.++.+.+..|++..++++++++|+++..+++|.++.+.|+.+...
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 7778899999999999999999999999999999999999999999999999999999988763
No 34
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.07 E-value=5.1e-09 Score=95.82 Aligned_cols=133 Identities=15% Similarity=0.135 Sum_probs=108.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (334)
.+.+..+.++++|+...+..|.. .++.+|....... .++++.+.++...... . ...++..+......|++. .++
T Consensus 148 ~G~ll~l~aa~~~a~~~v~~r~~-~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~-~--~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 148 TGAALALGAGACWAIYILSGQRA-GAEHGPATVAIGS-LIAALIFVPIGALQAG-E--ALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hccCCchHHHHHH-HHHHHHHHHHHHHccC-c--ccCCHHHHHHHHHHHHHHHHHH
Confidence 36778899999999999999984 5568888775554 5566666666554322 1 223444444556788888 899
Q ss_pred HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (334)
Q Consensus 83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~ 147 (334)
+.++++++++.+++.++.+.++.|+++.++++++++|+++.. +++|..+.+.|++....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 99999999999998854
No 35
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.07 E-value=1.5e-08 Score=89.72 Aligned_cols=264 Identities=11% Similarity=0.075 Sum_probs=187.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHH
Q 019865 32 SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFI 111 (334)
Q Consensus 32 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~l 111 (334)
+|..+++..-+.+.+.-...... ++.. . .....+++....++.......|-|.|++|.+==.-.+-=++--+=+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~--~k~~-~-~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKW--WKKE-L-SGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhc--cccc-C-CCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 47778888878877665444332 2222 1 112223456666776788889999999998754433333333444567
Q ss_pred HHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHH
Q 019865 112 LAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIY 191 (334)
Q Consensus 112 la~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~ 191 (334)
++.++.|.|.+.+ +.+-.++.-.|+.+..+.+.+.. .....+++...|..++...-+.=++-
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s------------~~~~g~~ns~~G~~Ll~~~L~fDgfT 187 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDS------------SSKSGRENSPIGILLLFGYLLFDGFT 187 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCC------------ccccCCCCchHhHHHHHHHHHHHhhH
Confidence 8899999999999 99999999899988755432211 01224456689999999998888889
Q ss_pred HHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCCCc--ccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCC
Q 019865 192 YIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNA--WRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKG 268 (334)
Q Consensus 192 ~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~--~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~ 268 (334)
+..++++-+++. ++..+++...+++++.-....+-.+...+. +....+..+.-++.... +..++|.+-++-+++-|
T Consensus 188 n~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FG 266 (327)
T KOG1581|consen 188 NATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFG 266 (327)
T ss_pred HhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcc
Confidence 999999887643 378888888888888766664332222221 21122223444444444 56689999999999999
Q ss_pred ceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 269 PVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 269 a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
+-..+.++...=++++.++.+.+|.++++.|+.|..+++.|+.+-...++
T Consensus 267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~ 316 (327)
T KOG1581|consen 267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK 316 (327)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999886554333
No 36
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.03 E-value=2.4e-07 Score=83.06 Aligned_cols=288 Identities=9% Similarity=0.025 Sum_probs=204.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCChHH--HHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFI--LVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (334)
Q Consensus 6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~--~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (334)
....+.=++.--.+.+.-|.++...=-|.. +...+++.+.+.+...-.. +--+. ++++++..++.+-..++..+..
T Consensus 14 l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~lv~~-~~l~~~~~kk~~P~~~lf~~~i 91 (314)
T KOG1444|consen 14 LLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-GLVNF-RPLDLRTAKKWFPVSLLFVGML 91 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-ceeec-CCcChHHHHHHccHHHHHHHHH
Confidence 444444444455566677775543222333 3458888887766555322 21222 5677887788888888877777
Q ss_pred HHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccc
Q 019865 84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLI 163 (334)
Q Consensus 84 ~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~ 163 (334)
..-..+++|.+...-.++=+..|+++++....++|.|++.+ .+.++....+|.......
T Consensus 92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~--------------- 150 (314)
T KOG1444|consen 92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT--------------- 150 (314)
T ss_pred HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc---------------
Confidence 78889999999999999999999999999999999888888 999999888887766221
Q ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCC---Cccc-ccC
Q 019865 164 NELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNP---NAWR-LRP 238 (334)
Q Consensus 164 ~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~---~~~~-~~~ 238 (334)
+......|..+++...++-+.+.+..|+..+..+ .....+++..+.+.........++++.+ .+.+ ...
T Consensus 151 ------d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~ 224 (314)
T KOG1444|consen 151 ------DLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD 224 (314)
T ss_pred ------cceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc
Confidence 1112244899999999999999999998755322 2566778888888887777776666421 1111 111
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 239 ~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
...+..+...++++-++.|.. .+..+..++++.++....+-....+-..++.|++.++..++|..+=+.|-++.+..+.
T Consensus 225 ~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~ 303 (314)
T KOG1444|consen 225 SSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF 303 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence 234667777788777776654 4667778888899999777788888888888999999999998887766666665544
Q ss_pred Hhhhh
Q 019865 319 MMNFV 323 (334)
Q Consensus 319 ~~~~~ 323 (334)
+.++.
T Consensus 304 ~~k~~ 308 (314)
T KOG1444|consen 304 RKKKQ 308 (314)
T ss_pred hhccC
Confidence 44433
No 37
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.03 E-value=2.5e-09 Score=97.34 Aligned_cols=134 Identities=12% Similarity=0.065 Sum_probs=102.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHH
Q 019865 178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRS 257 (334)
Q Consensus 178 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~ 257 (334)
.++.+.++++||.+.+..|+..++.+ +. ..+....++++..|....... ...|...+ ..+...+..+.......+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 46788999999999999998877644 42 455556666677776654211 12233222 233334444445777889
Q ss_pred HHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 258 VFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 258 ~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
.++.+++++.+++.++++.+.+|+++.+++++++||++++.+++|..+++.|+++...+
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999887644
No 38
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.02 E-value=9.2e-09 Score=94.23 Aligned_cols=130 Identities=18% Similarity=0.202 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (334)
+.++++.++++|+...+..|. ..++.+|..... ..+.+.+.+.....+.. . ...+.+.+......+....+++.
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~-~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~-~-~~~~~~~~~~l~~~~~~t~~~~~ 230 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRK-YARGKNGITLFF---ILTALALWIKYFLSPQP-A-MVFSLPAIIKLLLAAAAMGFGYA 230 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-ccCCCCchhHHH---HHHHHHHHHHHHHhcCc-c-ccCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999 455678776532 33333444433332211 1 23455556666666643388999
Q ss_pred HHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 85 FHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 85 ~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
++++++++.+++.++.+.++.|++..++++++++|+++.. +++|+++.+.|+.+..
T Consensus 231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHh
Confidence 9999999999999999999999999999999999999999 9999999999998873
No 39
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.99 E-value=2.1e-08 Score=93.99 Aligned_cols=135 Identities=10% Similarity=0.097 Sum_probs=101.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHHHHHHHhhccCC---CCCCcHHHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHF-ILVVYSNTLAIFLLVPSSFIFYRKRT---PPQLTWSIVCRIFLLGLLSC 80 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~-~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~ 80 (334)
+.+.++.++++|+...+..|... ++++|. ...++...++.+.+.+......+... ....+.. .......+....
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~-~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~t~ 267 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIM-SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAIITS 267 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHHHH
Confidence 45678889999999999999844 456554 66777777777766555554332111 0111222 122333443336
Q ss_pred HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~ 147 (334)
+++.++++++++.+++.+++..++.|++++++++++++|+++.. +++|.++.+.|+.+...
T Consensus 268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 78889999999999999999999999999999999999999999 99999999999999854
No 40
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.95 E-value=5.5e-09 Score=93.69 Aligned_cols=137 Identities=12% Similarity=0.133 Sum_probs=108.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCC---CcccccCCch-hhHHHHHHHH
Q 019865 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNP---NAWRLRPDIE-LMAIGYSAIF 251 (334)
Q Consensus 176 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~---~~~~~~~~~~-~~~ll~~gi~ 251 (334)
+|.++.++++++|+...+..|. ..+.+ |.+.++++++++++++.+......+.. ..++...... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999997 45676 999999999999887766554332210 0111111112 3345555654
Q ss_pred HHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 252 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
.+..+.++++++++.+++.++.+.+..|+++.+++++++||+++..+++|.++.+.|+.+...
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 667899999999999999999999999999999999999999999999999999999887653
No 41
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.94 E-value=5.6e-09 Score=83.16 Aligned_cols=122 Identities=12% Similarity=0.096 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHH
Q 019865 176 IGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSV 255 (334)
Q Consensus 176 ~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~ 255 (334)
.|.++.+.+.++-+..+++.|+-.++.+ +.+.... . . ..... .. .-...++.|+++.++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~-~~-------------~p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLA-FG-------------LALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHH-Hh-------------ccHHHHHHHHHHHHH
Confidence 4678888888888999999999887765 3221111 0 0 00011 00 111245788889999
Q ss_pred HHHHHHHHhccCCceEEEeccchHHHHHHHHHHH--HhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIA--FLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 256 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l--~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
++.+|.+++++.+.+.+.++..+.++...+.++. ++||++|+.+++|..+|+.|+++++++++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888888885 89999999999999999999999886554
No 42
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.91 E-value=8.3e-07 Score=81.94 Aligned_cols=295 Identities=11% Similarity=0.031 Sum_probs=173.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHH--HHhhccCC--CCCCcHHHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSS--FIFYRKRT--PPQLTWSIVCRIFLLGLLS 79 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~--~~~~~~~~--~~~~~~~~~~~~~~~g~~~ 79 (334)
.+++..+++.++||..+.-.|. . ++.+=..+-..-..++.+ +.|.. .+.-+... ....+.+.+...++.|++.
T Consensus 7 ~G~~~~~i~~~~~GS~~~p~K~-~-k~w~wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G~~W 83 (345)
T PRK13499 7 LGIIWHLIGGASSGSFYAPFKK-V-KKWSWETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFGALW 83 (345)
T ss_pred HHHHHHHHHHHHhhcccccccc-c-CCCchhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4788999999999999999998 3 334422220001111111 11100 00001000 0224566677788888888
Q ss_pred HHHHHHHHHHhhccCchhhhhhh-hhhhHHHHHHHHHHhhccc---eeeeccccchhhHHHHHHHHHHHHHHhcCCCCCC
Q 019865 80 CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKL---ELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITS 155 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~---~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~ 155 (334)
..++..++.++++.+.+.+..+. .++-+...++..++++|-. +..+ ...-.+|+++.++|+.+......-
T Consensus 84 ~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~--g~~~~~gv~liliGi~l~s~Ag~~---- 157 (345)
T PRK13499 84 GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNG--GRMTLLGVLVALIGVAIVGRAGQL---- 157 (345)
T ss_pred HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccch--HHHHHHHHHHHHHHHHHHHHhhhh----
Confidence 99999999999999999999884 4888999999999988765 3331 112678889999999988542211
Q ss_pred CCCCccccccccc-CCCcchhhHHHHHHHHHHHHHHHH-------HHHHHHH-hhCCchHHHHHH---HHHHHHHHHHH-
Q 019865 156 APSKNKLINELVQ-LPLSNWTIGGIFLAAHSVILAIYY-------IVQAWIV-RDYPAELMVTLI---CSIFVTILSSA- 222 (334)
Q Consensus 156 ~~~~~~~~~~~~~-~~~~~~~~G~~~~l~aa~~~a~~~-------v~~~~~~-~~~~~~~~~~~~---~~l~~~i~~~~- 222 (334)
++++..++ .++.+..+|.+.++++.+.++.|+ ...+... .+.+ +.....- .++.+..+.-.
T Consensus 158 -----k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~-~~~~~lp~~~~~~~G~~~~n~~ 231 (345)
T PRK13499 158 -----KERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVD-PLYAALPSYVVIMGGGAITNLG 231 (345)
T ss_pred -----cccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCC-chHHHHHHHHHHHHHHHHHHHH
Confidence 11111110 234567899999999999999999 3333211 1222 3222222 22234433322
Q ss_pred HHHh---ccCCC---CcccccC---CchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEe---cc-chHHHHHHHHHHH
Q 019865 223 VSLV---AEKNP---NAWRLRP---DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSM---FK-PLGMVVALVFGIA 289 (334)
Q Consensus 223 ~~l~---~~~~~---~~~~~~~---~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~---~~-~l~Pv~a~~~~~l 289 (334)
.-.. .+++. .+..... .......+..|+ .=.++..+|..+-++.+...... +. -+..+++.+++.
T Consensus 232 ~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi- 309 (345)
T PRK13499 232 FCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL- 309 (345)
T ss_pred HHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-
Confidence 1111 21211 1111100 011111123333 33456777778877776654433 33 666799999999
Q ss_pred HhCCccc------chhhhhhHHHHhhHHhhhh
Q 019865 290 FLGDTLY------LGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 290 ~l~E~l~------~~~~iG~~lIi~g~~l~~~ 315 (334)
++||.=+ ...++|.++++.|..+...
T Consensus 310 ~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 310 VLKEWKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 4999877 5668899998888877653
No 43
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=98.87 E-value=6.4e-08 Score=84.69 Aligned_cols=279 Identities=15% Similarity=0.148 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHh---CCCC----hHHHHHHHHHHHHHHHHHHHHHhhccCCC----------CCC--cHHHHHHHHHHH
Q 019865 16 DVGLNTVTKAAMS---RGAS----HFILVVYSNTLAIFLLVPSSFIFYRKRTP----------PQL--TWSIVCRIFLLG 76 (334)
Q Consensus 16 wg~~~~~~k~~~~---~~~~----p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----------~~~--~~~~~~~~~~~g 76 (334)
-+.+.+..|.+-+ ++-| |+.....-++-=.++++.+.+.+.+..++ ++. +.+ ....+.-+
T Consensus 15 Gs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~Pa 93 (372)
T KOG3912|consen 15 GSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPPA 93 (372)
T ss_pred ccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecChH
Confidence 3456777776422 2222 55555555555556667766665443221 000 111 12233466
Q ss_pred HHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCC
Q 019865 77 LLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSA 156 (334)
Q Consensus 77 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~ 156 (334)
++...+..+.|.|+.+|+++.-..+-...-+|+.+++..+++++++.+ ||+|+.....|++.+... .....
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~-d~~~~-- 164 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL-DVHLV-- 164 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee-ecccc--
Confidence 677888899999999999999999999999999999999999999999 999999999999988221 00000
Q ss_pred CCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccC----CC
Q 019865 157 PSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEK----NP 231 (334)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~----~~ 231 (334)
.+...+.++...|+++.+.+-+.-|...+.-.|..++.+ +|...+.|..++|.++...++..... ++
T Consensus 165 --------~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~s 236 (372)
T KOG3912|consen 165 --------TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDS 236 (372)
T ss_pred --------cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCc
Confidence 011112345688999999999999999999888877644 58999999999996655544433221 11
Q ss_pred C---------ccc----ccCCchhhHHHHHHHHHHHHHHHHHH---H-HhccCCceEEEeccchHHHHHHHHHHHHhCCc
Q 019865 232 N---------AWR----LRPDIELMAIGYSAIFAVSVRSVFHT---W-ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDT 294 (334)
Q Consensus 232 ~---------~~~----~~~~~~~~~ll~~gi~~t~~~~~l~~---~-al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~ 294 (334)
. +|. -......+.+...|. .++-.+++ . --|..++++=.....+...+-=+++.....|.
T Consensus 237 fS~~~~g~~eD~~~~~~~~~e~p~l~val~~~---~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~ 313 (372)
T KOG3912|consen 237 FSCNPRGVLEDWGDAFAALQESPSLAVALIGF---TVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEY 313 (372)
T ss_pred CcCCCCcchhhHHHHHHHhcCCchhHHHHhhh---hhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHH
Confidence 0 110 000111222333333 33333332 1 22345555556666677777777777888899
Q ss_pred ccchhhhhhHHHHhhHHhhhh
Q 019865 295 LYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 295 l~~~~~iG~~lIi~g~~l~~~ 315 (334)
.+..|+.|..+.+.|+.+.+.
T Consensus 314 f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 314 FHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988763
No 44
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.85 E-value=2.6e-08 Score=81.90 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh------CCchHHHHHHHHHHHHHHHHHHHHhccCCCC---ccccc------CCch
Q 019865 177 GGIFLAAHSVILAIYYIVQAWIVRD------YPAELMVTLICSIFVTILSSAVSLVAEKNPN---AWRLR------PDIE 241 (334)
Q Consensus 177 G~~~~l~aa~~~a~~~v~~~~~~~~------~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~---~~~~~------~~~~ 241 (334)
|.++++.+.++.+++.++.|+..++ ..++.....+....+.+...|.....|.+.. ..... .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6788999999999999999998665 2258899999999999999999888877431 11110 1123
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 242 LMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 242 ~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
+..++..|++ ...-....++.+++.+|...++...+..+..++.+++++||++++.++.|.++.+.|.++.+
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 4445555553 34557777889999999999999999999999999999999999999999999999988754
No 45
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=98.82 E-value=2e-07 Score=82.63 Aligned_cols=254 Identities=15% Similarity=0.161 Sum_probs=168.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCC--CCCCcHHHH-HHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHH
Q 019865 33 HFILVVYSNTLAIFLLVPSSFIFYRKRT--PPQLTWSIV-CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFT 109 (334)
Q Consensus 33 p~~~~~~R~~~a~l~l~~~~~~~~~~~~--~~~~~~~~~-~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~ 109 (334)
|..++...+++=.++-.......+++.. +...+|++. ++....|+..+..-.+-.++++|++.+.=+..=+++++|+
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FI 124 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFI 124 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHH
Confidence 6677766665554433333222221111 134556554 4556677777888889999999999999999999999999
Q ss_pred HHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHH
Q 019865 110 FILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILA 189 (334)
Q Consensus 110 ~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a 189 (334)
.+++.++.-||.++. -..-..+..+|+.+.+. + +++-...|..+...++.+-+
T Consensus 125 llFs~if~lEk~~w~------L~l~v~lI~~Glflft~-K--------------------sTqf~i~Gf~lv~~aS~~sG 177 (349)
T KOG1443|consen 125 LLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-K--------------------STQFNIEGFFLVLAASLLSG 177 (349)
T ss_pred HHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-c--------------------ccceeehhHHHHHHHHHhhh
Confidence 999999999999988 66666666677766532 1 12334667777766666544
Q ss_pred HHHHHHHHHHhhC----CchHHHHHHHHHHHHHHHHHHHHhccCCCC-----cccccCCc-hhhHHHHHHHHHHHHHHHH
Q 019865 190 IYYIVQAWIVRDY----PAELMVTLICSIFVTILSSAVSLVAEKNPN-----AWRLRPDI-ELMAIGYSAIFAVSVRSVF 259 (334)
Q Consensus 190 ~~~v~~~~~~~~~----~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~-----~~~~~~~~-~~~~ll~~gi~~t~~~~~l 259 (334)
+--...+++.++- ++|........-...+.+.|..+..|+... .+...... .+..+.+.+. +..+++.+
T Consensus 178 lRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l 256 (349)
T KOG1443|consen 178 LRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLL 256 (349)
T ss_pred hhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHH
Confidence 4444444433332 247777777677777778888888887421 22222111 2222222222 33333333
Q ss_pred HH---HHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 260 HT---WALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 260 ~~---~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
-. -.+.+.+..+.++..-.--+-..++|....+|+++-..+.|..+...|+.+-.
T Consensus 257 ~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 257 EFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 22 34567888888999999999999999999999999999999999999998873
No 46
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.80 E-value=1.8e-07 Score=85.85 Aligned_cols=135 Identities=17% Similarity=0.140 Sum_probs=102.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCCh---HHHHHHHHHHHHHHHHHHHHHhhccCC----CCCCcHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASH---FILVVYSNTLAIFLLVPSSFIFYRKRT----PPQLTWSIVCRIFLLG 76 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p---~~~~~~R~~~a~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~g 76 (334)
.+.++.+.++++|+...+..|.. .++.++ .....+-..++.+.+.......+.... ....+.+.+......|
T Consensus 143 ~G~~l~l~aal~~a~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 143 LGFMLTLAAAFSWACGNIFNKKI-MSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 46778899999999999999983 333332 334444455544433333222221110 0134556677788889
Q ss_pred HHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 77 LLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 77 ~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
.+. ..++.++++++++.+++.++.+..+.|++..++++++++|+++.. +++|..+.++|+.+.
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~ 285 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYIN 285 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHH
Confidence 888 899999999999999999999999999999999999999999999 999999999999876
No 47
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.79 E-value=2.3e-08 Score=83.11 Aligned_cols=214 Identities=15% Similarity=0.133 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCC
Q 019865 79 SCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPS 158 (334)
Q Consensus 79 ~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~ 158 (334)
....++.|..+++..+++.++.+.....-|+.+++++.+|||...- ++++.++++.|++++.-. +
T Consensus 63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~-D-------- 127 (290)
T KOG4314|consen 63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYA-D-------- 127 (290)
T ss_pred EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEec-c--------
Confidence 3678899999999999999999999999999999999999999999 999999999999988321 1
Q ss_pred CcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC--chHHHHHHHHHHHHHHHHHHHH---hccC-CCC
Q 019865 159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP--AELMVTLICSIFVTILSSAVSL---VAEK-NPN 232 (334)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~--~~~~~~~~~~l~~~i~~~~~~l---~~~~-~~~ 232 (334)
.+..+...|..++..++.--++|-++.|+.....+ |.-..+.--.++-.++...-++ +++- +.+
T Consensus 128 ----------N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~q 197 (290)
T KOG4314|consen 128 ----------NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQ 197 (290)
T ss_pred ----------chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHH
Confidence 13455688999999999999999999999876543 2222221111222222221111 1211 122
Q ss_pred cccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865 233 AWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR 312 (334)
Q Consensus 233 ~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l 312 (334)
++.. ..|..+...+.+.... -.+-+.++....|-..|.-.....+....++.++=+-..+...+.|..+|+.|..+
T Consensus 198 sFA~---~PWG~l~G~A~L~lAF-N~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiL 273 (290)
T KOG4314|consen 198 SFAA---APWGCLCGAAGLSLAF-NFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFIL 273 (290)
T ss_pred HHhh---CCchhhhhHHHHHHHH-hhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 2221 2455555444433333 23344666777888888888888888899998876767788899999999999887
Q ss_pred hhhhhHHhh
Q 019865 313 INKVEIMMN 321 (334)
Q Consensus 313 ~~~~~~~~~ 321 (334)
....++.+|
T Consensus 274 iiiP~d~~e 282 (290)
T KOG4314|consen 274 IIIPEDKDE 282 (290)
T ss_pred eecccchhh
Confidence 775554443
No 48
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.72 E-value=9e-08 Score=87.95 Aligned_cols=136 Identities=18% Similarity=0.206 Sum_probs=104.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhC--CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC-C-------CcHHHHHH-H
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSR--GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP-Q-------LTWSIVCR-I 72 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~--~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~-~-------~~~~~~~~-~ 72 (334)
.+.+..+.++++|+...+..|.. .+ ++||..+..+-+..+.+.+.|+....+.....+ + ........ .
T Consensus 145 ~G~~~~l~a~~~~a~~~v~~k~~-~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 145 AGFLSAMISNITFVSRNIFSKKA-MTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 47778899999999999999984 44 689999999999999999999876543211000 0 01011111 2
Q ss_pred HHHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 73 FLLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 73 ~~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
...+... ...+.+++.+++++++..+++.....|+++.++++++++|+++.+ +++|..+.+.|+.+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHH
Confidence 2223222 344467778999999999999999999999999999999999999 9999999999999874
No 49
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.72 E-value=2.5e-08 Score=77.97 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHH
Q 019865 211 ICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAF 290 (334)
Q Consensus 211 ~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~ 290 (334)
+...++.+..........+..+.+.......+...+..|+++...++.+|.+++++.++ .++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 44556666555555443332111221122355566666777777899999999999995 88899999999999999999
Q ss_pred hCCcccchhhhhhHHHHhhHHhhhhhhHH
Q 019865 291 LGDTLYLGRCVCMILRGLQFLRINKVEIM 319 (334)
Q Consensus 291 l~E~l~~~~~iG~~lIi~g~~l~~~~~~~ 319 (334)
++|++++.++.|.+++..|+.++...+..
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999988766543
No 50
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.69 E-value=7e-07 Score=73.36 Aligned_cols=134 Identities=19% Similarity=0.288 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC--------CC--cHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP--------QL--TWSI 68 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~--------~~--~~~~ 68 (334)
|+...+.+.++-+...+..|..+++ +.+|.++..+-...+.+++.|.....++....+ +. ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4677889999999999999986665 689999999999999999999987765433100 00 2244
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHH
Q 019865 69 VCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (334)
Q Consensus 69 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l 144 (334)
+......|+++...+...+..++++++-..++....-.+.+.++++++++|+++.+ ++.|+.+++.|..+
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 45566667777899999999999999999999999999999999999999999999 99999999999875
No 51
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.65 E-value=2.3e-07 Score=84.83 Aligned_cols=229 Identities=16% Similarity=0.238 Sum_probs=127.9
Q ss_pred HHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCC
Q 019865 74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP 152 (334)
Q Consensus 74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~ 152 (334)
+.|... ..+..+-+.|+.+.|.+..+.+..+.-++..+++..++|||++++ .+.|+.+++.|..++.... +.
T Consensus 54 ~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~-~~ 126 (300)
T PF05653_consen 54 WIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA-PK 126 (300)
T ss_pred HHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC-CC
Confidence 445555 777788899999999999999999999999999999999999999 9999999999999875432 21
Q ss_pred CCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHH-------HHHHHHH
Q 019865 153 ITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTI-------LSSAVSL 225 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i-------~~~~~~l 225 (334)
.+. .+ +.++-........+. -.. .+...+...+.....+|..++ + .........+.|+. +...+..
T Consensus 127 ~~~--~~-t~~~l~~~~~~~~fl-~y~-~~~~~~~~~L~~~~~~r~g~~-~-i~vyi~i~sl~Gs~tvl~~K~i~~~i~~ 199 (300)
T PF05653_consen 127 EEP--IH-TLDELIALLSQPGFL-VYF-ILVLVLILILIFFIKPRYGRR-N-ILVYISICSLIGSFTVLSAKAISILIKL 199 (300)
T ss_pred CCC--cC-CHHHHHHHhcCccee-hhH-HHHHHHHHHHHHhhcchhccc-c-eEEEEEEeccccchhhhHHHHHHHHHHH
Confidence 111 00 000000000111111 111 111111222222222221111 1 11011111111111 1111111
Q ss_pred hccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHH-HHHHHHHHhCCc--ccc----h
Q 019865 226 VAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVV-ALVFGIAFLGDT--LYL----G 298 (334)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~-a~~~~~l~l~E~--l~~----~ 298 (334)
..+++ +.+. .+..|..++. -+.+...-....++|+++.+++.+.+..+..-.. +++-+.++++|. .++ .
T Consensus 200 ~~~g~-~~f~--~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~ 275 (300)
T PF05653_consen 200 TFSGD-NQFT--YPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIG 275 (300)
T ss_pred HhcCc-hhhh--hhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHH
Confidence 11111 1121 1223333322 2334455566677999999999998888776554 455566677874 444 4
Q ss_pred hhhhhHHHHhhHHhhhhhhHHh
Q 019865 299 RCVCMILRGLQFLRINKVEIMM 320 (334)
Q Consensus 299 ~~iG~~lIi~g~~l~~~~~~~~ 320 (334)
...|+.+++.|+++.+++|+.+
T Consensus 276 ~~~G~~~ii~GV~lL~~~~~~~ 297 (300)
T PF05653_consen 276 FLCGFLIIIIGVFLLSSSKDKE 297 (300)
T ss_pred HHHHHHHHHHhhheeeccCchh
Confidence 4567788889999998777653
No 52
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.54 E-value=4.5e-07 Score=79.56 Aligned_cols=202 Identities=11% Similarity=0.014 Sum_probs=123.0
Q ss_pred hhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCC-----------CCCCCCCccccccc
Q 019865 98 ASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP-----------ITSAPSKNKLINEL 166 (334)
Q Consensus 98 a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~-----------~~~~~~~~~~~~~~ 166 (334)
....-+..|+++++..+...+||.+.. |+++.++...|++.-.+.+.+. ... .+ ...+
T Consensus 7 ~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~-~~----~~~~ 75 (222)
T TIGR00803 7 HIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQ-MV----QSSA 75 (222)
T ss_pred hHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeee-cC----CCCc
Confidence 345566788899999998889998888 9999999998887532211100 000 00 0000
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCch-HHHHHHHHHHHHHHHHHHHHhccCC-CCcccccCCchhhH
Q 019865 167 VQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAE-LMVTLICSIFVTILSSAVSLVAEKN-PNAWRLRPDIELMA 244 (334)
Q Consensus 167 ~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~~l~~~~~-~~~~~~~~~~~~~~ 244 (334)
......+...|....+.+.++-+...+.+++..|+.+.. ........+.+.+.........+.. ...+... ..+..
T Consensus 76 ~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 153 (222)
T TIGR00803 76 KTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFF--IGYPT 153 (222)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcc--cCCch
Confidence 001112446677777777777777777777765543311 1112222222222211111111111 0011100 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHh
Q 019865 245 IGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLR 312 (334)
Q Consensus 245 ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l 312 (334)
..+.-++....++.+..+.+++.++...+....++++++.+++.+++||++++.++.|+.+++.|+++
T Consensus 154 ~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 154 AVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 12222335566788889999999999999999999999999999999999999999999999988764
No 53
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.54 E-value=1.8e-06 Score=78.88 Aligned_cols=128 Identities=17% Similarity=0.147 Sum_probs=102.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHH---HHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNT---LAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS 79 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~---~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 79 (334)
.|++.+.+++.+.++......|. . ++||....+.... +++.++.+.. + + .+ +. +.+..+...+.|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~-~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~-~-~~-~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKA-F--GVDGLSVLLPQAIGMVIGGIIFNLGH--I-L-AK-PL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-c--CCCcceehhHHHHHHHHHHHHHHHHH--h-c-cc-ch-HHHHHHHHHHHHHHH
Confidence 67999999999999999999998 3 4899988555544 3443333322 1 1 12 22 334445566688887
Q ss_pred HHHHHHHHHHhh-ccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchh----hHHHHHHHHHHHH
Q 019865 80 CCGQMFHYFGIE-NGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKS----FGTVLLIGGALIV 145 (334)
Q Consensus 80 ~~~~~~~~~al~-~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~----~g~~l~l~Gv~ll 145 (334)
..++.+|+.+.+ +.+++.++.+.+..|+...+++++++||+.+++ ++ +|.++.+.|+.++
T Consensus 222 ~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 222 GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHH
Confidence 888999999999 999999999999999999999999999999999 99 9999999999887
No 54
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.51 E-value=2.6e-07 Score=71.78 Aligned_cols=67 Identities=7% Similarity=0.004 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 249 gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
++.+.++++.++.+++++.+.+++-+...+.|+++.++|++++||++++.+++|..+++.|+.++..
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3456778999999999999999999999999999999999999999999999999999999987654
No 55
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.50 E-value=4.2e-06 Score=78.52 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=99.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHHHHHHhhccCCC----------CCCcHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSR------GASHFILVVYSNTLAIFLLVPSSFIFYRKRTP----------PQLTWS 67 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~------~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----------~~~~~~ 67 (334)
.+.+..+.++++|+...+..|..+++ +.++.....+-...+++++.|+....+..... ....+.
T Consensus 194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~ 273 (350)
T PTZ00343 194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKG 273 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchH
Confidence 47788999999999999999985442 25677777777888998888887643211000 011111
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 68 IVCRIF-LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 68 ~~~~~~-~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
...... ..++...+.+.+-|++++++++...++..++.|+++.++++++++|+++.. +++|.++.+.|+++.
T Consensus 274 ~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 274 IIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHHH
Confidence 111122 222222455555557999999999999999999999999999999999999 999999999999876
No 56
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.50 E-value=5e-06 Score=75.18 Aligned_cols=130 Identities=18% Similarity=0.193 Sum_probs=103.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVV-YSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CC 81 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~-~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 81 (334)
.+..+.+.++++|+...+..|.. . +.++..... +.+........+... ..++ .....+.+......|+++ ..
T Consensus 154 ~g~~~~l~a~~~~a~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 154 LGLLLALAAALLWALYTALVKRL-S-RLGPVTLALLLQLLLALLLLLLFFL-SGFG---APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-c-CCChHHHHHHHHHHHHHHHHHHHHh-cccc---ccCCHHHHHHHHHHHHHHHHH
Confidence 57788899999999999999973 3 677777776 554422222223221 1111 133456667788888888 67
Q ss_pred HHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 82 ~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
++.++++++++.+++.++.+..+.|++..++++++++|+++.+ +++|+++.+.|+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~ 285 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLA 285 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 999999999999987
No 57
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.49 E-value=2e-06 Score=66.83 Aligned_cols=66 Identities=21% Similarity=0.295 Sum_probs=61.2
Q ss_pred HHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
..+.++ ...+.++..++++.|.+.+..+.++.|+++.+++++++|||++.+ |++|+.+.++|++++
T Consensus 41 ~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 41 GLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence 344455 889999999999999999999999999999999999999999999 999999999999987
No 58
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.45 E-value=2.4e-08 Score=85.78 Aligned_cols=273 Identities=15% Similarity=0.150 Sum_probs=176.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (334)
..++..++-++.||+....... .+=+|.+-..-- .++++.+..+.++..+ |..+.+.+...++.|++...++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k---~GG~p~qQ~lGt-T~GALifaiiv~~~~~----p~~T~~~~iv~~isG~~Ws~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANK---FGGKPYQQTLGT-TLGALIFAIIVFLFVS----PELTLTIFIVGFISGAFWSFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeee---cCCChhHhhhhc-cHHHHHHHHHHheeec----CccchhhHHHHHHhhhHhhhhh
Confidence 3567788899999999988766 245666555443 3444444444443322 5667777777888888889999
Q ss_pred HHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchh----hHHHHHHHHHHHHHHhcCCCCCCCCC
Q 019865 84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKS----FGTVLLIGGALIVTLYKGLPITSAPS 158 (334)
Q Consensus 84 ~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~----~g~~l~l~Gv~ll~~~~~~~~~~~~~ 158 (334)
...+.++++.+++.+..+.+ ++-+-+.+++.+.++|.-+.. +. +++++.+.|+.+-+.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~------~~IlG~iAliliviG~~lTs~----------- 136 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT------QIILGFIALILIVIGIYLTSK----------- 136 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcch------hHHHHHHHHHHHHHhheEeee-----------
Confidence 99999999999999999966 777888899999999987776 43 344444555544311
Q ss_pred CcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccC
Q 019865 159 KNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP 238 (334)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~ 238 (334)
.+++...+++.++.-+|....+.+.+.|-.|.++.+...-+.-+...-....+..+++.+... .+... . .
T Consensus 137 --~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v~g~saiLPqAiGMv~~ali~~~~---~~~~~--~---~ 206 (288)
T COG4975 137 --QDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFDVDGLSAILPQAIGMVIGALILGFF---KMEKR--F---N 206 (288)
T ss_pred --eccccccccChHhhhhheeeeeeeccceeeeEeeeccccccchhhhhHHHHHHHHHHHHHhhc---ccccc--h---H
Confidence 111112223445567899999999999999998877654221112222233344443322221 11111 1 1
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhh----hhhHHHHhhHHhh
Q 019865 239 DIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRC----VCMILRGLQFLRI 313 (334)
Q Consensus 239 ~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~----iG~~lIi~g~~l~ 313 (334)
+..|..++ .|+ .=+.+-..+..+-++.|.++.=.+.-+..+.+.+=+.++++|+-|..++ +|.++++.|..+.
T Consensus 207 K~t~~nii-~G~-~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 207 KYTWLNII-PGL-IWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred HHHHHHHh-hHH-HHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 11333322 222 1234566777788888988888888888999999999999999998654 5666666665543
No 59
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.33 E-value=3.3e-06 Score=74.85 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCccc-ccCCchhhHHHHHHHHHH
Q 019865 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWR-LRPDIELMAIGYSAIFAV 253 (334)
Q Consensus 175 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~-~~~~~~~~~ll~~gi~~t 253 (334)
..|.++++.+-+.|+.-..+.|-+ +..+ +.++..++.+++.+..........+..+-++ ...+..+......+.+.
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li- 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI- 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-
Confidence 579999999999999888777654 4555 8899999999999988776655544322222 22344666666666643
Q ss_pred HHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 254 SVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 254 ~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
..-...|.||.++.....+|.-.+++|.+.++.|.++++|+++..|++..++-.+|+....
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~ 143 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT 143 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999999999999888887544
No 60
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.30 E-value=4e-06 Score=73.39 Aligned_cols=262 Identities=15% Similarity=0.094 Sum_probs=172.8
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhccCC---CCC--CcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhh
Q 019865 32 SHFILVVYSNTLAIFLLVPSSFIFYRKRT---PPQ--LTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTP 106 (334)
Q Consensus 32 ~p~~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~--~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P 106 (334)
.|..+.+++.++...+-+.+.....+... .|+ ++.+..+...-+.....+.-.+=.++++|.+++.=-+=-++..
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLtt 139 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTT 139 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhh
Confidence 37778888888776655554433222111 022 2223223333333332333333467888999888777778889
Q ss_pred HHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHH
Q 019865 107 GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSV 186 (334)
Q Consensus 107 ~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~ 186 (334)
+|+.++.+.++|+|-+.. -..++.+.+.|..+ |...+. ..+.-...|.++...+++
T Consensus 140 vFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~l-----GvdqE~-------------~~~~ls~~GvifGVlaSl 195 (347)
T KOG1442|consen 140 VFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGL-----GVDQEG-------------STGTLSWIGVIFGVLASL 195 (347)
T ss_pred hHHHHhHHhhcccccccc------cceeehhheehhee-----cccccc-------------ccCccchhhhHHHHHHHH
Confidence 999999999999999988 66666666555333 211110 012234689999999999
Q ss_pred HHHHHHHHHHHHHhhCCc-hHHHHHHHHHHHHHHHHHHHHhccCCCCccc--ccC-CchhhHHHHHHHHHHHHHHHHHHH
Q 019865 187 ILAIYYIVQAWIVRDYPA-ELMVTLICSIFVTILSSAVSLVAEKNPNAWR--LRP-DIELMAIGYSAIFAVSVRSVFHTW 262 (334)
Q Consensus 187 ~~a~~~v~~~~~~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~--~~~-~~~~~~ll~~gi~~t~~~~~l~~~ 262 (334)
+-|+..+..|+.....+| -+..+.+....+.++++|...+.+.-...+. ..+ .+.|..+...|+++-.++|. -.+
T Consensus 196 ~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyv-Tg~ 274 (347)
T KOG1442|consen 196 AVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYV-TGW 274 (347)
T ss_pred HHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhhe-eeE
Confidence 999999999987665443 5777888899999988888866544222222 222 23566667777766555543 124
Q ss_pred HhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 263 ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 263 al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
=+|-.+|.+-.+....--..=.+++..+++|..+..-+-+-++|+.|-......|+
T Consensus 275 QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 275 QIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred EEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence 45566777777777777777799999999999999999998888887777665544
No 61
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=98.21 E-value=1.9e-05 Score=67.22 Aligned_cols=252 Identities=12% Similarity=0.118 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHH
Q 019865 34 FILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILA 113 (334)
Q Consensus 34 ~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla 113 (334)
+.+.+.+.+.+.+.+...-..+--+.|..+.++ .+...++....-+.--.+++|.+...-+++-++.-+..+...
T Consensus 38 flll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~-----WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE 112 (309)
T COG5070 38 FLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKK-----WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE 112 (309)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhheehhhhhh-----hcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence 456677777777766655433322222122222 222233333344455689999999999999999999999999
Q ss_pred HHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHH
Q 019865 114 IIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYI 193 (334)
Q Consensus 114 ~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v 193 (334)
..++|.|++.. .....++.+..-+.-.. ++... .....+..+.|.+++...+++-+.|-.
T Consensus 113 vl~Fgg~vtsl------~l~SFilMvlSS~va~w--~D~q~------------~~~~~~~lN~GY~Wm~~NclssaafVL 172 (309)
T COG5070 113 VLFFGGRVTSL------ELLSFILMVLSSVVATW--GDQQA------------SAFKAQILNPGYLWMFTNCLSSAAFVL 172 (309)
T ss_pred HHHhcCccchh------hHHHHHHHHHHHHHhcc--chhhH------------HHHHhcccCCceEEEehhhHhHHHHHH
Confidence 99999999988 88887776665444311 11100 001122445688899999999999988
Q ss_pred HHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCC-CCccccc-CCchhhHHHHHHHHHHHHHHHHHHHHhccCCce
Q 019865 194 VQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKN-PNAWRLR-PDIELMAIGYSAIFAVSVRSVFHTWALRKKGPV 270 (334)
Q Consensus 194 ~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~-~~~~~~~-~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~ 270 (334)
..|+..+--+ .....+++.-+.+..++..+...+|+. +.+.... +...+.++...|+.+. .--++-.|.++-.+.+
T Consensus 173 ~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv-giSy~saWcvrVtSST 251 (309)
T COG5070 173 IMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV-GISYCSAWCVRVTSST 251 (309)
T ss_pred HHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh-hhhhccceeEeehhhh
Confidence 8887654221 257788999999999999999888763 2221111 1224556666776444 4455678899999999
Q ss_pred EEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHH-hhHH
Q 019865 271 YVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRG-LQFL 311 (334)
Q Consensus 271 ~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi-~g~~ 311 (334)
..++..-++-.-..+-|.+++||+.+...+....+=. +|++
T Consensus 252 tySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 252 TYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred HHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988887766543 4443
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.21 E-value=4.1e-05 Score=60.99 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=88.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (334)
++++.+++..++-+...++.|.++. +.++....... ...+ ... . .+ ......|+.. .++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~-~~g~~~~~~~~--~~~~----~~~---~----~p------~~~i~lgl~~~~la 61 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMS-RLPLLSHAWDF--IAAL----LAF---G----LA------LRAVLLGLAGYALS 61 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHh-hCCCccchhHH--HHHH----HHH---h----cc------HHHHHHHHHHHHHH
Confidence 5788888888888999999999754 34433322211 0000 000 0 11 1245677777 999
Q ss_pred HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHH--HhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAII--FRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~--~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
+.++.+++++.+.+.+..+.+..+.++.+.++. ++||+++.+ +++|+++.++|++++
T Consensus 62 ~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv 120 (129)
T PRK02971 62 MLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLI 120 (129)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 999999999999999999999999888888875 799999999 999999999999998
No 63
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.18 E-value=4.4e-05 Score=67.11 Aligned_cols=218 Identities=15% Similarity=0.112 Sum_probs=146.0
Q ss_pred HHHHHHHHHhhc-cCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 019865 81 CGQMFHYFGIEN-GSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSK 159 (334)
Q Consensus 81 ~~~~~~~~al~~-~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~ 159 (334)
..+.+=.+++++ .+.-.=.++-+-.++-++.+++++.|+|.+.+ |..+.++.-+|+++-++.+..+.... .+
T Consensus 76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~~-~~ 148 (330)
T KOG1583|consen 76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRSK-LS 148 (330)
T ss_pred eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhhh-hc
Confidence 334444566766 35445556667788999999999999999999 99999999999998866543322110 00
Q ss_pred cccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCC-CCcc---
Q 019865 160 NKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKN-PNAW--- 234 (334)
Q Consensus 160 ~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~-~~~~--- 234 (334)
..++...+.....|..|..+...+-+.-|...+.+...-+|+. ++-+.+++.-+.+.+.++.. .++ -++|
T Consensus 149 -~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~----~~div~~~~~~ 223 (330)
T KOG1583|consen 149 -GLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFM----GDDIVSHWRLA 223 (330)
T ss_pred -ccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHh----cchHHHHHHHH
Confidence 0011111223345788988888877777777777777766653 57777777777665544332 221 0011
Q ss_pred -----------cccCCchhhHHHHHHHHHHHHHHHHHHHHhc----cCCceEEEeccchHHHHHHHHHHHHhCCcccchh
Q 019865 235 -----------RLRPDIELMAIGYSAIFAVSVRSVFHTWALR----KKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGR 299 (334)
Q Consensus 235 -----------~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~----~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~ 299 (334)
...-+..|.. ++..++.|+.=.++.. +.++-++++...+.-.++.+++.+.|+.+.++..
T Consensus 224 ~~se~~~~p~~g~~vP~~~~y-----Ll~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h 298 (330)
T KOG1583|consen 224 FKSESYLIPLLGFKVPSMWVY-----LLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWH 298 (330)
T ss_pred hcCcceeccccCccccHHHHH-----HHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHH
Confidence 1111223333 3344556666555544 4566688999999999999999999999999999
Q ss_pred hhhhHHHHhhHHhhhh
Q 019865 300 CVCMILRGLQFLRINK 315 (334)
Q Consensus 300 ~iG~~lIi~g~~l~~~ 315 (334)
++|+.+++.|-.+...
T Consensus 299 ~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 299 WLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887763
No 64
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.03 E-value=0.0001 Score=64.15 Aligned_cols=131 Identities=13% Similarity=0.070 Sum_probs=108.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CC 81 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~ 81 (334)
..+..+.+.+..||+..-+..|.+- +..+.-.=+..-+.+++++.+|+-.-.... .-.+++.+...+..|.+. .+
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~~ag~---~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAAQAGP---ALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhhhcch---hhcChHHHHHHHHHHHHhccc
Confidence 3467788899999999999999853 356666777888999999999986543221 224556566677888999 99
Q ss_pred HHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHH
Q 019865 82 GQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL 143 (334)
Q Consensus 82 ~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ 143 (334)
.+.+-..++++.|...-++++++.|.+.++.++++++|+++.. ||+++...+++..
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsa 278 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASA 278 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999 9999988777655
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.97 E-value=0.00017 Score=66.66 Aligned_cols=137 Identities=12% Similarity=0.020 Sum_probs=102.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCC--CcHHHHHHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQ--LTWSIVCRIFLLGLLSC 80 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~ 80 (334)
.++-+.++.+++++|..++..+. ..++.|+.++...=-+.+.++..+.....+++.. .+ .+++........++...
T Consensus 167 i~GDll~l~~a~lya~~nV~~E~-~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i-~~~~w~~~~~~~~v~~~~~lf 244 (334)
T PF06027_consen 167 ILGDLLALLGAILYAVSNVLEEK-LVKKAPRVEFLGMLGLFGFIISGIQLAILERSGI-ESIHWTSQVIGLLVGYALCLF 244 (334)
T ss_pred chhHHHHHHHHHHHHHHHHHHHH-hcccCCHHHHHHHHHHHHHHHHHHHHHheehhhh-hccCCChhhHHHHHHHHHHHH
Confidence 45778899999999999999998 4567888887777667777776666655554433 22 33333222222222225
Q ss_pred HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHH
Q 019865 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTL 147 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~ 147 (334)
..+.+.-..++++++....+=.-++.++..++..+++++++++. ..+|.++.++|.++...
T Consensus 245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~ 305 (334)
T PF06027_consen 245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNL 305 (334)
T ss_pred HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEc
Confidence 55556677899999988888788889999999999999999999 99999999999998743
No 66
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.93 E-value=1.1e-05 Score=72.52 Aligned_cols=227 Identities=17% Similarity=0.161 Sum_probs=129.0
Q ss_pred HHHHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCC
Q 019865 74 LLGLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLP 152 (334)
Q Consensus 74 ~~g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~ 152 (334)
..|.+. ..+...=|.|+.+.|++..+.+..++-+..++++..++|||++.. ..+|+.++++|-.+++... |.
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~ha-P~ 140 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVIHA-PK 140 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEEec-Cc
Confidence 346666 677777788889999999999999999999999999999999999 9999999999999885422 21
Q ss_pred CCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCC--chHHHHHHHHHHHHHH-------HHHH
Q 019865 153 ITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYP--AELMVTLICSIFVTIL-------SSAV 223 (334)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~--~~~~~~~~~~l~~~i~-------~~~~ 223 (334)
.+.. .+..+..+...+..+. +++..--+...+-....| +++. +.+.......+.|..- ...+
T Consensus 141 e~~i---~t~~el~~~~~~~~Fl---iy~~~iil~~~il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~ai 211 (335)
T KOG2922|consen 141 EQEI---ESVEEVWELATEPGFL---VYVIIIILIVLILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAI 211 (335)
T ss_pred cccc---ccHHHHHHHhcCccHH---HHHHHHHHHHHHHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHH
Confidence 1100 0000000001111111 111111111111111111 1221 1233333333332110 0011
Q ss_pred HHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHHHhccCCceEEEeccchH-HHHHHHHHHHHhCCccc--c---
Q 019865 224 SLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTWALRKKGPVYVSMFKPLG-MVVALVFGIAFLGDTLY--L--- 297 (334)
Q Consensus 224 ~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~-Pv~a~~~~~l~l~E~l~--~--- 297 (334)
-+...+..+ .. .+..|..++.... +...-....++|++..+++.++++.++. ..+++.-+.++++|--. .
T Consensus 212 klt~~g~~q-l~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i 287 (335)
T KOG2922|consen 212 KLTFSGNNQ-LF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDI 287 (335)
T ss_pred HHHhcCCcc-cc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 111222221 11 1124444433332 4444555667999999999998887754 55667778888887433 2
Q ss_pred -hhhhhhHHHHhhHHhhhhhhHHh
Q 019865 298 -GRCVCMILRGLQFLRINKVEIMM 320 (334)
Q Consensus 298 -~~~iG~~lIi~g~~l~~~~~~~~ 320 (334)
..+.|+..++.|+++..+.|+..
T Consensus 288 ~~~~~Gf~ti~~G~flL~~~kd~~ 311 (335)
T KOG2922|consen 288 AGELCGFVTIFLGIFLLHRTKDME 311 (335)
T ss_pred HHHHHhHHHhhheeeEeeeecccc
Confidence 45678888999999987666543
No 67
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.91 E-value=5.5e-05 Score=66.33 Aligned_cols=259 Identities=12% Similarity=0.068 Sum_probs=157.7
Q ss_pred CCCChH--HHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhh
Q 019865 29 RGASHF--ILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTP 106 (334)
Q Consensus 29 ~~~~p~--~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P 106 (334)
+++.|+ .+++.++++=..+-+..+...+.++ +..+|| ....++.+....+.+-.-++.|.+=- +.++..+.-
T Consensus 69 ~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~--r~iP~r---tY~~la~~t~gtmGLsn~SlgYLNYP-tQviFKccK 142 (367)
T KOG1582|consen 69 EGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKR--RVIPWR---TYVILAFLTVGTMGLSNGSLGYLNYP-TQVIFKCCK 142 (367)
T ss_pred ccCcccchHHHHHHHHHHHhhhheEEEeecccc--eecchh---HhhhhHhhhhhccccCcCccccccCc-HHHHHHhhh
Confidence 456654 4666666554333222222112111 223444 34444544433333334444443222 233443332
Q ss_pred -HHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHH
Q 019865 107 -GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHS 185 (334)
Q Consensus 107 -~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa 185 (334)
+=+++.+.++-+.|.... ...++.+...|.++.++.+.. ..++-+..|..+.-.+-
T Consensus 143 liPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~-----------------~sPNF~~~Gv~mIsgAL 199 (367)
T KOG1582|consen 143 LIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ-----------------TSPNFNLIGVMMISGAL 199 (367)
T ss_pred hhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc-----------------cCCCcceeeHHHHHHHH
Confidence 223445677777888888 999999999999998664321 12223367776655555
Q ss_pred HHHHHHHHHHHHHHhhCC-chHHHHHHHHHHHHHHHHHHHHhccCCCCcccccC--CchhhHHHHHHHHHHHHHHHHHHH
Q 019865 186 VILAIYYIVQAWIVRDYP-AELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRP--DIELMAIGYSAIFAVSVRSVFHTW 262 (334)
Q Consensus 186 ~~~a~~~v~~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~--~~~~~~ll~~gi~~t~~~~~l~~~ 262 (334)
++-|+--.++.+..+..+ +..+++++...+|.+.+......++.-.+.|+.-. +......++.--..+.++...-.-
T Consensus 200 l~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLa 279 (367)
T KOG1582|consen 200 LADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLA 279 (367)
T ss_pred HHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHH
Confidence 556665566666666544 25667778888888877776666666544444321 111222222222244555666666
Q ss_pred HhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhh
Q 019865 263 ALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKV 316 (334)
Q Consensus 263 al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~ 316 (334)
.++..|+..++.++...--+++++++++|..++|....-|..+|+.|+++-...
T Consensus 280 lI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ys 333 (367)
T KOG1582|consen 280 LIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYS 333 (367)
T ss_pred HHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhccc
Confidence 778889999999999999999999999999999999999999999999976543
No 68
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.89 E-value=0.00016 Score=64.56 Aligned_cols=114 Identities=14% Similarity=0.070 Sum_probs=86.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCG 82 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (334)
.|++..++.+.+.+.....+.|. .+.||....+=. .++.++-..+.....+ ++.+.+..++-.+.|++...+
T Consensus 137 ~kgi~~Ll~stigy~~Y~~~~~~---~~~~~~~~~lPq-aiGm~i~a~i~~~~~~----~~~~~k~~~~nil~G~~w~ig 208 (269)
T PF06800_consen 137 KKGILALLISTIGYWIYSVIPKA---FHVSGWSAFLPQ-AIGMLIGAFIFNLFSK----KPFFEKKSWKNILTGLIWGIG 208 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh---cCCChhHhHHHH-HHHHHHHHHHHhhccc----ccccccchHHhhHHHHHHHHH
Confidence 56889999999999888888887 368887777644 4443333333222111 112223335677889999999
Q ss_pred HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceee
Q 019865 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR 124 (334)
Q Consensus 83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~ 124 (334)
+.+++.+.+..+.+.+-.+.++.++...+.+.+++||+-++|
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 999999999999999999999999999999999999998888
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.69 E-value=0.00014 Score=57.01 Aligned_cols=66 Identities=14% Similarity=0.313 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 250 i~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
+...+++++++.+++++.+.+.+ +...-+.-+...+.+++++||++|+.+++|..+|+.|++..+.
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 44556799999999999998876 3445577788899999999999999999999999999988764
No 70
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.69 E-value=0.00052 Score=55.42 Aligned_cols=131 Identities=10% Similarity=0.072 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHH
Q 019865 178 GIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRS 257 (334)
Q Consensus 178 ~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~ 257 (334)
.++.+.+...-+.....+.++.++..+|...+...+..+.+.+..+....++. +.+...+..|+..+ -|+++. +--
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG~-~~V 78 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLGV-FFV 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHHH-HHH
Confidence 46788888999999999999999887799999999999999888888777653 22212222333322 455443 346
Q ss_pred HHHHHHhccCCceEEE-eccchHHHHHHHHHHH----HhCCcccchhhhhhHHHHhhHHh
Q 019865 258 VFHTWALRKKGPVYVS-MFKPLGMVVALVFGIA----FLGDTLYLGRCVCMILRGLQFLR 312 (334)
Q Consensus 258 ~l~~~al~~~~a~~~s-~~~~l~Pv~a~~~~~l----~l~E~l~~~~~iG~~lIi~g~~l 312 (334)
....+..++.|++... ....-+-+.+++++.+ .-++++++.+++|.++++.|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 6777888999998664 4445567777888875 34578999999999999999864
No 71
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.67 E-value=0.00025 Score=54.55 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865 252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI 313 (334)
Q Consensus 252 ~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~ 313 (334)
..+++|++...++|+.|.+.+ +...-+--+...+.+++++||++++.+++|..+|+.|++..
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 456789999999999998865 66666777888999999999999999999999999999875
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.65 E-value=0.00017 Score=55.70 Aligned_cols=66 Identities=20% Similarity=0.226 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 250 i~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
+...++++.++..++++.+.+.+ +...-+.-+...+++++++||++++.+++|+.+|+.|++..+.
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34556789999999999888866 4445567777899999999999999999999999999998754
No 73
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.57 E-value=0.00026 Score=54.20 Aligned_cols=65 Identities=20% Similarity=0.336 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 250 IFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 250 i~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
+.+.+.+|++...++|+.+.+.+ +...-+.-+.+.+.+++++||++|+.+++|..+|+.|++..+
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 33556789999999999988865 666667788889999999999999999999999999998764
No 74
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.47 E-value=0.00029 Score=53.42 Aligned_cols=64 Identities=14% Similarity=0.224 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 252 ~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
+..++|.+...++|+.+...+ +...-+-.+...+.++++|||++++.+++|..++++|+...+.
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 445789999999999888765 6666777788899999999999999999999999999987654
No 75
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.45 E-value=0.0033 Score=57.80 Aligned_cols=136 Identities=19% Similarity=0.253 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHHH--hhccCCCC---CCcHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAM-SRGASHFILVVYSNTLAIFLLVPSSFI--FYRKRTPP---QLTWSIVCRIFLLGLL 78 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~--~~~~~~~~---~~~~~~~~~~~~~g~~ 78 (334)
|+..++.+.++-|......+... ..+.++.+..++-...+.+..++.... .+...... ....+.+..+....+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 78889999999999999999754 356889999999999999888777765 22111100 0112234555666666
Q ss_pred HHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 79 SCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 79 ~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
+..++.+.+.-.++.++-..+++..+.-+.+.+++.++++++++.. +|.|+.+.+.|..+-.
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~------~~~G~~lv~~g~~~~~ 296 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPL------QWIGIVLVFAGIFLYS 296 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChH------HHHHHHHhHHHHHHHH
Confidence 6888888889999999999999999999999999999999999999 9999999999988763
No 76
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.34 E-value=0.00075 Score=52.08 Aligned_cols=108 Identities=17% Similarity=0.214 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHHHHHHHH
Q 019865 10 VTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCGQMFHYF 88 (334)
Q Consensus 10 l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~ 88 (334)
++..++||.+++++|.+. .+.++..-.. |..-.... ++ .+++ .. ..+.. -.+...|++
T Consensus 2 l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~~-----Ll---------~n~~----y~-ipf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIKF-----LL---------LNPK----YI-IPFLLNQSGSVLFFL 60 (113)
T ss_pred eeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHHH-----HH---------HhHH----HH-HHHHHHHHHHHHHHH
Confidence 456789999999999964 3455443331 31111111 10 0121 22 23333 778889999
Q ss_pred HhhccCchhhhhhh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHH
Q 019865 89 GIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (334)
Q Consensus 89 al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l 144 (334)
.+...+.+.+..+. +++=++|.+.++++.+|..+++ .++|+.+.+.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeee
Confidence 99999999999996 5777888888988888888888 99999999999865
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.25 E-value=0.0063 Score=46.85 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=54.7
Q ss_pred HHHHHHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 80 CCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
...+.+...++|+.|.+.+-.+-. ..-+.+.+.+.+++||+++.. |++|+.+.+.|++.+
T Consensus 46 ~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 46 LAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 788889999999999999987744 777889999999999999999 999999999999986
No 78
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.19 E-value=0.00065 Score=62.23 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=86.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHH
Q 019865 172 SNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIF 251 (334)
Q Consensus 172 ~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~ 251 (334)
.++..|..+++.++++.+....++|+...|.+ ....-.- ++....+. +..| +.|+.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~-~~~~~~~----------------~~~~~~l~---~~~W----~~G~~ 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLP-RGSLRAG----------------SGGRSYLR---RPLW----WIGLL 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccccccc----------------chhhHHHh---hHHH----HHHHH
Confidence 45688999999999999999999999876654 1000000 00000000 0112 23333
Q ss_pred HHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 252 AVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 252 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
..+++..+...|+...+++.++++..+.-+++.+++..+++|+++..++.|+.+++.|..+..
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 445567777788889999999999999999999999999999999999999999999876543
No 79
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.15 E-value=0.00036 Score=61.25 Aligned_cols=134 Identities=13% Similarity=0.193 Sum_probs=106.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (334)
++..+.+..++.-+..++..|. +.++.+....+.+-.+++.+.-++.+...+.... |+ .+++++....+|.+|.+++
T Consensus 191 ~gt~aai~s~lf~asvyIilR~-iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l-P~-cgkdr~l~~~lGvfgfigQ 267 (346)
T KOG4510|consen 191 PGTVAAISSVLFGASVYIILRY-IGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQL-PH-CGKDRWLFVNLGVFGFIGQ 267 (346)
T ss_pred CchHHHHHhHhhhhhHHHHHHH-hhccccEEEEehHHHHHHHHHHHHHHhhccceec-Cc-cccceEEEEEehhhhhHHH
Confidence 4456667777777778888888 6677888877777777777665555544444343 33 4455567788999999999
Q ss_pred HHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 84 MFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 84 ~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
.+...|+|..-++-.+++.++.-+++.++-.++++|.++.. .|.|+++.+...+...
T Consensus 268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~w------s~~Ga~~vvsS~v~~a 324 (346)
T KOG4510|consen 268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIW------SWVGAVMVVSSTVWVA 324 (346)
T ss_pred HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHH------HhhceeeeehhHHHHH
Confidence 99999999999999999999999999999999999999999 9999887776666653
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.11 E-value=0.0029 Score=48.92 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=58.0
Q ss_pred HHHHH-HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 75 LGLLS-CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 75 ~g~~~-~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
..+.+ .+.+.++..++++.|.+.+-.+ ....-+.+.+.+++++||+++.. +++|+.+.++|++.+
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l 101 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVI 101 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence 34445 8888889999999999999888 55788889999999999999999 999999999999998
No 81
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.10 E-value=0.0097 Score=48.02 Aligned_cols=127 Identities=16% Similarity=0.157 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Q 019865 9 MVTLEFLDVGLNTVTKAAMSRGAS-HFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFHY 87 (334)
Q Consensus 9 ~l~~~~~wg~~~~~~k~~~~~~~~-p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 87 (334)
.+.+..+-+....+--. +.+... |+.-.++-+..+.+.+..+....+++.. ++.+. ..++...-|.+|...-.+..
T Consensus 6 a~~aG~~i~~q~~~N~~-L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~-~~~~~-~p~w~~lGG~lG~~~V~~~~ 82 (138)
T PF04657_consen 6 ALLAGALIALQAAFNGQ-LGKALGSPLVASFISFGVGFILLLIILLITGRPSL-ASLSS-VPWWAYLGGLLGVFFVLSNI 82 (138)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHHhccccc-chhcc-CChHHhccHHHHHHHHHHHH
Confidence 34444444444444443 334454 9999999999999998888877665422 22221 12455568888888888999
Q ss_pred HHhhccCchhhhhhhhhh-hHHHHHHHHH----HhhccceeeeccccchhhHHHHHHHHHHH
Q 019865 88 FGIENGSPALASAMIDLT-PGFTFILAII----FRMEKLELRVQSSQAKSFGTVLLIGGALI 144 (334)
Q Consensus 88 ~al~~~~~~~a~~i~~~~-P~~~~lla~~----~~~e~~~~~~~~~~~~~~g~~l~l~Gv~l 144 (334)
+..++.+++.+..+.-.. -+...++..+ ..|++++.+ |.+|+++.++|+.+
T Consensus 83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 999999999988776544 4555566664 456788888 99999999999864
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.09 E-value=0.0025 Score=49.96 Aligned_cols=65 Identities=20% Similarity=0.299 Sum_probs=58.3
Q ss_pred HHHH-HHHHHHHHHHhhccCchhhhhhh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 76 GLLS-CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 76 g~~~-~~~~~~~~~al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
.+.. +..++++..++++.|.+.+-.+- ...-+.+.+.+.++++|+++.. +++|+.+.++|++.+-
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence 3444 88889999999999999999885 5888999999999999999999 9999999999999883
No 83
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.06 E-value=0.0067 Score=49.19 Aligned_cols=140 Identities=13% Similarity=0.117 Sum_probs=97.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHH
Q 019865 175 TIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVS 254 (334)
Q Consensus 175 ~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~ 254 (334)
....+..+.+..+-....-...|+.+..++|..-....+.+|.+.+..+.+..+.++. +....+..|+..+ -|+++..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~-GG~lGa~ 81 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWI-GGLLGAI 81 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHH-ccchhhh
Confidence 4567888899999999999999999888779999999999999999888877655432 2222222333322 2232222
Q ss_pred HHHHHHHHHhccCCce-EEEeccchHHHHHHHHHHHHhC----CcccchhhhhhHHHHhhHHhhhhhh
Q 019865 255 VRSVFHTWALRKKGPV-YVSMFKPLGMVVALVFGIAFLG----DTLYLGRCVCMILRGLQFLRINKVE 317 (334)
Q Consensus 255 ~~~~l~~~al~~~~a~-~~s~~~~l~Pv~a~~~~~l~l~----E~l~~~~~iG~~lIi~g~~l~~~~~ 317 (334)
+ -..-.....|.|++ .......-+-+.+++++.+=+. .++++..++|..++++|+++..+++
T Consensus 82 ~-vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 82 F-VTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred h-hhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 2 33344566777777 4456666677778888776544 5788999999999999966655443
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.99 E-value=0.0023 Score=47.99 Aligned_cols=55 Identities=24% Similarity=0.372 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhCCcccchhhhhhHHH
Q 019865 252 AVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILR 306 (334)
Q Consensus 252 ~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lI 306 (334)
..+++++++.+++|+.+.+.+ ....-+..+...+.+.+++||++|+.++.|..+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 556789999999999999887 4455688889999999999999999999998875
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.99 E-value=0.0032 Score=47.82 Aligned_cols=60 Identities=17% Similarity=0.180 Sum_probs=55.1
Q ss_pred HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 80 CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
...+.+.-.++|+.|.+.+-.+ ...--+.+.+.+++++||+++.. +++|+.+.++|++.+
T Consensus 41 ~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~L 101 (106)
T COG2076 41 GLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHh
Confidence 7888899999999999999877 45778899999999999999999 999999999999987
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.90 E-value=0.0058 Score=46.74 Aligned_cols=60 Identities=12% Similarity=0.094 Sum_probs=55.3
Q ss_pred HHHHHHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 80 CCGQMFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
...+++...++|+.|.+.+-.+-. ..-+.+.+.+.+++||+++.. +++|+.+.++|++.+
T Consensus 40 ~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l 100 (105)
T PRK11431 40 IVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhh
Confidence 888889999999999999987744 778899999999999999999 999999999999987
No 87
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.80 E-value=0.0043 Score=56.90 Aligned_cols=137 Identities=10% Similarity=0.090 Sum_probs=107.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHH---hCCCChHHHHHHHHHHHHHHHH-HHHHHhhccCC---CC-CCcHHHHHHHH
Q 019865 2 GASVTAAMVTLEFLDVGLNTVTKAAM---SRGASHFILVVYSNTLAIFLLV-PSSFIFYRKRT---PP-QLTWSIVCRIF 73 (334)
Q Consensus 2 ~~~~~~~~l~~~~~wg~~~~~~k~~~---~~~~~p~~~~~~R~~~a~l~l~-~~~~~~~~~~~---~~-~~~~~~~~~~~ 73 (334)
+..|+.....+.+..+.-.++.|..+ ..+.++..+..+-.-++...++ |.......+.. .. ..+...+...
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL- 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH-
Confidence 35678888999999999999999866 3468999999999899998888 88766443221 11 3333333333
Q ss_pred HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 74 ~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
....+..+.+..-|..++++|+-.=++....=-.++...++++++|+++.. +..|..+++.|+.+-
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y 305 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLY 305 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHH
Confidence 333555778889999999999988888887777777888999999999999 999999999999986
No 88
>PRK13499 rhamnose-proton symporter; Provisional
Probab=96.45 E-value=0.12 Score=48.04 Aligned_cols=143 Identities=15% Similarity=0.041 Sum_probs=90.9
Q ss_pred cchhHHHHHHHHHHHHHH-------HHHHHHHhCCCChHHHHHHHHH---HHHHHH-HHHHHHh--hccCC----CCCCc
Q 019865 3 ASVTAAMVTLEFLDVGLN-------TVTKAAMSRGASHFILVVYSNT---LAIFLL-VPSSFIF--YRKRT----PPQLT 65 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~-------~~~k~~~~~~~~p~~~~~~R~~---~a~l~l-~~~~~~~--~~~~~----~~~~~ 65 (334)
.|++..++++.+..+..+ +.-+.+...+.+|.....-.+. ++..+. +.++.++ ++++. ..+.+
T Consensus 173 ~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~ 252 (345)
T PRK13499 173 KKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAKNKDLSLKADFSLA 252 (345)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchhcccc
Confidence 678888888888877777 5555544456777765555544 444433 3333322 11111 01112
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhh---hh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHH
Q 019865 66 ----WSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASA---MI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVL 137 (334)
Q Consensus 66 ----~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~---i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l 137 (334)
.++.....+-|++....+.+|..+-+..+.+.+.. +. ++.-++..+.+. ++||+-+-.|+....-++|+++
T Consensus 253 ~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vl 331 (345)
T PRK13499 253 KPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVV 331 (345)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHH
Confidence 23333346666666888889999888886665555 55 555577777777 5999988555566668899999
Q ss_pred HHHHHHHHH
Q 019865 138 LIGGALIVT 146 (334)
Q Consensus 138 ~l~Gv~ll~ 146 (334)
.+.|..++.
T Consensus 332 iI~g~~lig 340 (345)
T PRK13499 332 IILAANIVG 340 (345)
T ss_pred HHHHHHHHh
Confidence 999988873
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.28 E-value=0.045 Score=40.91 Aligned_cols=52 Identities=21% Similarity=0.152 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhhccCchhhhhhh-hhhhHHHHHHHHHHhhccceeeeccccchhhHHHH
Q 019865 80 CCGQMFHYFGIENGSPALASAMI-DLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVL 137 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i~-~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l 137 (334)
+..+.++..++++.|.+.+-.+. ....+.+.+.+.+++||+++.+ |+.|+.+
T Consensus 40 ~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 40 GLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 88889999999999999997664 5889999999999999999999 9999865
No 90
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.87 E-value=0.023 Score=43.92 Aligned_cols=109 Identities=8% Similarity=-0.082 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHHHH
Q 019865 183 AHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFHTW 262 (334)
Q Consensus 183 ~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~~~ 262 (334)
+-++.|+..+-+.||..++.++...-+ +..-... . +.. +|. .+. .+.....+..+|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~--~~~~~~~-~----Ll~-----n~~-----y~i-----pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKASL--QLLQEIK-F----LLL-----NPK-----YII-----PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccchH--HHHHHHH-H----HHH-----hHH-----HHH-----HHHHHHHHHHHHHH
Confidence 346788999999999887655222211 2111111 1 111 111 111 22334457788899
Q ss_pred HhccCCceEEEecc-chHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865 263 ALRKKGPVYVSMFK-PLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI 313 (334)
Q Consensus 263 al~~~~a~~~s~~~-~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~ 313 (334)
.+++.+-+.+.++. .+.=+++.+.++++.+|..++..++|+++|+.|+.+.
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999995 8899999999988888888889999999999998653
No 91
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.64 E-value=0.0052 Score=53.47 Aligned_cols=132 Identities=11% Similarity=0.010 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHH
Q 019865 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVR 256 (334)
Q Consensus 177 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~ 256 (334)
+.+.+++=++.|+..-....+.-. +|..-+....+ ++++......++-.+...+. .++.-...|++ =.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG---~p~qQ~lGtT~-GALifaiiv~~~~~p~~T~~-----~~iv~~isG~~-Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG---KPYQQTLGTTL-GALIFAIIVFLFVSPELTLT-----IFIVGFISGAF-WSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC---ChhHhhhhccH-HHHHHHHHHheeecCccchh-----hHHHHHHhhhH-hhhh
Confidence 456677778888776655443322 25544443333 33333333323222211111 23333344443 3368
Q ss_pred HHHHHHHhccCCceEEEeccc-hHHHHHHHHHHHHhCCcccchhh-h---hhHHHHhhHHhhhhhhH
Q 019865 257 SVFHTWALRKKGPVYVSMFKP-LGMVVALVFGIAFLGDTLYLGRC-V---CMILRGLQFLRINKVEI 318 (334)
Q Consensus 257 ~~l~~~al~~~~a~~~s~~~~-l~Pv~a~~~~~l~l~E~l~~~~~-i---G~~lIi~g~~l~~~~~~ 318 (334)
+..++++++..|.+++.++.. .+-+-+.+++.+.|||..++.++ + +.++++.|+++.+++|+
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 999999999999999998765 56777899999999999998754 3 45678899999998776
No 92
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.62 E-value=1.9 Score=39.92 Aligned_cols=296 Identities=15% Similarity=0.068 Sum_probs=162.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhc-cCC---CCCCcHHHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYR-KRT---PPQLTWSIVCRIFLLGLLS 79 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~-~~~---~~~~~~~~~~~~~~~g~~~ 79 (334)
.+++...+..++-|..++-.|. . ++.+=...-.....++-+ +.|.....-. +.. ....+...+.+..+.|++.
T Consensus 7 ~Gii~h~iGg~~~~sfy~P~kk-v-k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~lW 83 (344)
T PF06379_consen 7 LGIIFHAIGGFASGSFYVPFKK-V-KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLFGVLW 83 (344)
T ss_pred HHHHHHHHHHHHhhhhccchhh-c-CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHHHH
Confidence 3567778888889999999998 3 355544444444444443 4444322111 000 0123445667778889888
Q ss_pred HHHHHHHHHHhhccCchhhhhh-hhhhhHHHHHHHHHHhhccce-eeeccccchhhHHHHHHHHHHHHHHhcCCCCCCCC
Q 019865 80 CCGQMFHYFGIENGSPALASAM-IDLTPGFTFILAIIFRMEKLE-LRVQSSQAKSFGTVLLIGGALIVTLYKGLPITSAP 157 (334)
Q Consensus 80 ~~~~~~~~~al~~~~~~~a~~i-~~~~P~~~~lla~~~~~e~~~-~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~~~~~~~ 157 (334)
..+.+.|=.+++|...+...-+ ..+.-.+-.++-.++.++--. ......+...+|++++++|+.+..-. |.
T Consensus 84 GIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G~------ 156 (344)
T PF06379_consen 84 GIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA-GS------ 156 (344)
T ss_pred hcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH-HH------
Confidence 8888999999999988877644 446666666665555432100 11122345899999999999998432 21
Q ss_pred CCcccccccccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHH-------hhCCchH----HHHHHHHHHHHHHHHHHHHh
Q 019865 158 SKNKLINELVQLPLSNWTIGGIFLAAHSVILAIYYIVQAWIV-------RDYPAEL----MVTLICSIFVTILSSAVSLV 226 (334)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~-------~~~~~~~----~~~~~~~l~~~i~~~~~~l~ 226 (334)
.++.+...+.++.+..+|.+.++.+.+.-|..++-...-. +.-.++. ......+.-+.+.-....++
T Consensus 157 --~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~ 234 (344)
T PF06379_consen 157 --MKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLI 234 (344)
T ss_pred --hhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHH
Confidence 1111112223455678999999999887777765432210 1000121 11223333444444444433
Q ss_pred c---cCCCC---cccccCC---chhhHHHHHHHHHHHHHHHHHHHHhccCCce--E--EEeccchHHHHHHHHHHHHhCC
Q 019865 227 A---EKNPN---AWRLRPD---IELMAIGYSAIFAVSVRSVFHTWALRKKGPV--Y--VSMFKPLGMVVALVFGIAFLGD 293 (334)
Q Consensus 227 ~---~~~~~---~~~~~~~---~~~~~ll~~gi~~t~~~~~l~~~al~~~~a~--~--~s~~~~l~Pv~a~~~~~l~l~E 293 (334)
. .++.+ +++...+ ......+..|+ -=...+.+|-++-.+.++. . -.+...+..+++-+++.+ ++|
T Consensus 235 ~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkE 312 (344)
T PF06379_consen 235 LLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKE 312 (344)
T ss_pred HHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 2 12211 1211111 12222333343 2234566666777777754 2 244556677778888865 677
Q ss_pred ccc------chhhhhhHHHHhhHHhh
Q 019865 294 TLY------LGRCVCMILRGLQFLRI 313 (334)
Q Consensus 294 ~l~------~~~~iG~~lIi~g~~l~ 313 (334)
--. ...++|+.+++.++.++
T Consensus 313 WKg~s~kt~~vl~~G~~vlI~s~~iv 338 (344)
T PF06379_consen 313 WKGASKKTIRVLVLGIAVLILSVVIV 338 (344)
T ss_pred hccCCcccHHHHHHHHHHHHHHHHHH
Confidence 322 33567777776666554
No 93
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.37 E-value=0.081 Score=46.14 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHH
Q 019865 74 LLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL 143 (334)
Q Consensus 74 ~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ 143 (334)
...+..+....+..+.++|.++..-+....+.++++.+++.++++|+++.. +++|+.+.+.|+.
T Consensus 157 ~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~ 220 (222)
T TIGR00803 157 IVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF 220 (222)
T ss_pred HHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence 444445778888999999999999999999999999999999999999999 9999999888764
No 94
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.14 E-value=0.3 Score=44.07 Aligned_cols=134 Identities=14% Similarity=0.160 Sum_probs=102.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHH-hCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCC-----CcHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAM-SRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQ-----LTWSIVCRIFLLGL 77 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~-~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~ 77 (334)
.+++.+..--+.-|.++...+... ..++++..+.+.-++..++.-.......+. .+ +. .+.+.++-+++..+
T Consensus 172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~-~~-~av~F~~~hp~~~~Di~l~s~ 249 (327)
T KOG1581|consen 172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGH-LL-PAVSFIKEHPDVAFDILLYST 249 (327)
T ss_pred HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCC-Cc-hHHHHHHcChhHHHHHHHHHH
Confidence 456666666667777777766523 246899999999999888876666433221 11 21 23444566788888
Q ss_pred HHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 78 LSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 78 ~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
+++.++.+.|+-++.-++-.-+.++.+-=++..+++.+.++++++.. ||+|+.+-+.|+.+=
T Consensus 250 ~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 250 CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLE 311 (327)
T ss_pred hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHH
Confidence 89999999999999988888888888999999999999999999999 999999988887764
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.08 E-value=0.51 Score=42.06 Aligned_cols=136 Identities=13% Similarity=0.015 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQM 84 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 84 (334)
++++.+++.+++|++++-.|. . +.-|++.+-++-.....+.-+......+ . ++.. .+.++-|.+.+.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~-~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~---~-p~f~----p~amlgG~lW~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKK-F-DTGDGFFFQWVMCSGIFLVGLVVNLILG---F-PPFY----PWAMLGGALWATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEe-c-cCCCcHHHHHHHHHHHHHHHHHHHHhcC---C-Ccce----eHHHhhhhhhhcCce
Confidence 467889999999999999998 3 3567866655544333333233332221 1 3322 345666777788999
Q ss_pred HHHHHhhccCchhhhhhhhhhhHHHH-HHHHH-HhhccceeeeccccchhhHHHHHHHHHHHHHHhcCC
Q 019865 85 FHYFGIENGSPALASAMIDLTPGFTF-ILAII-FRMEKLELRVQSSQAKSFGTVLLIGGALIVTLYKGL 151 (334)
Q Consensus 85 ~~~~al~~~~~~~a~~i~~~~P~~~~-lla~~-~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~~~~~~ 151 (334)
+-.-.++..+.+.+..+-++.-+.+- ..+.+ +++++...- .......+|++++++|..+..+.+.+
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCC
Confidence 99999999999999988776544443 33333 344333221 11223788999999998887554433
No 96
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.98 E-value=0.46 Score=38.60 Aligned_cols=130 Identities=15% Similarity=0.077 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 019865 8 AMVTLEFLDVGLNTVTKAAMSRGA-SHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQMFH 86 (334)
Q Consensus 8 ~~l~~~~~wg~~~~~~k~~~~~~~-~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 86 (334)
..+++..+-.....+--. +.+.. +|+...++.+..+...+..+.+.+.++.. .....+..+|...-|.+|..+-..-
T Consensus 9 ~~i~aG~~l~~Q~~iN~q-L~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~-~a~~~~~pwW~~~GG~lGa~~vt~s 86 (150)
T COG3238 9 FAILAGALLPLQAAINGR-LARYLGSPLLASLISFLVGTVLLLILLLIKQGHPG-LAAVASAPWWAWIGGLLGAIFVTSS 86 (150)
T ss_pred HHHHHhhhhhhHHHHHHH-HHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhhccCCchHHHHccchhhhhhhhh
Confidence 334444444444333333 22233 59999999999999998888877433222 2222333356666777776666666
Q ss_pred HHHhhccCchhhhhh-hhhhhHHHHHHHHH-Hh---hccceeeeccccchhhHHHHHHHHHHHH
Q 019865 87 YFGIENGSPALASAM-IDLTPGFTFILAII-FR---MEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 87 ~~al~~~~~~~a~~i-~~~~P~~~~lla~~-~~---~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
........++....+ ..-+-+...++..+ ++ +++++.. +++|+++.++|++++
T Consensus 87 ~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 87 ILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred HHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 666677766666554 33445555555544 22 3556666 999999999995554
No 97
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.85 E-value=0.24 Score=46.02 Aligned_cols=136 Identities=12% Similarity=0.123 Sum_probs=100.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCCcHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMSRG----ASHFILVVYSNTLAIFLLVPSSFIFY---RKRTPPQLTWSIVCRIFLL 75 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~~~----~~p~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 75 (334)
..+-++.++++++.|...++.|. -..+ .|--.+-.+=-++..++++|..+... .++. +-.+..+...+++.
T Consensus 246 llG~llaL~sA~~YavY~vllk~-~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F-~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 246 LLGNLLALLSALLYAVYTVLLKR-KIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF-ELPSSTQFSLVVFN 323 (416)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-hcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc-cCCCCceeEeeeHh
Confidence 34677889999999999999997 2222 33333333333555666665544432 2222 11223334557788
Q ss_pred HHHH-HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 76 GLLS-CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 76 g~~~-~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
++++ ....++|-+|.-.+++-.+++=++++-...++...++.+.+++.. .++|.+..++|.+.+.
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVN 389 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhhee
Confidence 8999 999999999999999999999999888888888899988899999 9999999999988873
No 98
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.51 E-value=0.023 Score=51.44 Aligned_cols=119 Identities=15% Similarity=0.159 Sum_probs=90.4
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHh-ccCCCCcccccCCchhhHHHHH
Q 019865 170 PLSNWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLV-AEKNPNAWRLRPDIELMAIGYS 248 (334)
Q Consensus 170 ~~~~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~-~~~~~~~~~~~~~~~~~~ll~~ 248 (334)
.+.++.+|..+.+.+++..+...++.|+..+|.. .. ..- .+++..... + ..-|.
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~~-----------------~~ra~~gg~~yl~-----~--~~Ww~ 69 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-AS-----------------GLRAGEGGYGYLK-----E--PLWWA 69 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHHHh-hh-----------------cccccCCCcchhh-----h--HHHHH
Confidence 3556688999999999999999999888776643 10 000 111111111 1 12256
Q ss_pred HHHHHHHHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865 249 AIFAVSVRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI 313 (334)
Q Consensus 249 gi~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~ 313 (334)
|++...++-.+.+.++...+++.++++..+.-+.+.+++..+++|++++...+|+.+.++|-.+.
T Consensus 70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~i 134 (335)
T KOG2922|consen 70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTI 134 (335)
T ss_pred HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEE
Confidence 77777888888888888999999999999999999999999999999999999999988775544
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.31 E-value=1 Score=41.03 Aligned_cols=138 Identities=13% Similarity=0.119 Sum_probs=100.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhccC----CCCCC-cHHHHHHHHHHH
Q 019865 3 ASVTAAMVTLEFLDVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRKR----TPPQL-TWSIVCRIFLLG 76 (334)
Q Consensus 3 ~~~~~~~l~~~~~wg~~~~~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~----~~~~~-~~~~~~~~~~~g 76 (334)
..+|.++....+.=+......|...+ .+.+-+.+.++-.+.+...+....++.+... ..+.. ....+....+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 34788888888888888888887433 3466778899999999887777765554311 00111 123345666777
Q ss_pred HHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 77 LLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 77 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
+++..-+++-+++.+..|+..-++.....-..+.+...++.+++.++. ..+|+.+++.|-++-.
T Consensus 236 v~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 236 VMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHh
Confidence 777777789999999999988888885555555566666778889999 9999999999988763
No 100
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.05 E-value=0.037 Score=46.65 Aligned_cols=63 Identities=17% Similarity=0.128 Sum_probs=57.7
Q ss_pred HHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhH
Q 019865 256 RSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEI 318 (334)
Q Consensus 256 ~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~ 318 (334)
+-++|..++++++|+.++.+..-+-.+..+++++++||++....++..++-+.|+++....+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN 128 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN 128 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence 467889999999999999999999999999999999999999999999999999998875543
No 101
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=92.76 E-value=0.12 Score=46.04 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=56.9
Q ss_pred HHHHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhh
Q 019865 255 VRSVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVE 317 (334)
Q Consensus 255 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~ 317 (334)
+.-.+.+.++++.+|+..-+......+++.++++++++.+++..|+.+..+...|+.++....
T Consensus 29 ~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 29 IQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 445677789999999999999999999999999999999999999999999999999876443
No 102
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=91.75 E-value=4.3 Score=36.94 Aligned_cols=136 Identities=17% Similarity=0.116 Sum_probs=83.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCC----CChHHHHHHHHHHHHHHHHHHHHHhhccCCC---C---CC----cHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRG----ASHFILVVYSNTLAIFLLVPSSFIFYRKRTP---P---QL----TWSIV 69 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~----~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~---~---~~----~~~~~ 69 (334)
.+++....+.++-|.=+.+.+..++++ -+|+...+.-.-.-.+.+.|..+..+..... + .. ..+..
T Consensus 164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~ 243 (349)
T KOG1443|consen 164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVI 243 (349)
T ss_pred hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHH
Confidence 467778888888888888888755532 2466666555555555566665544332110 0 01 11222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 70 CRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 70 ~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
..+...|.+...--..-|.=+..|++-..++..-.-=+.+.+++..+.+|+++.. .|.|..++..|+.+=
T Consensus 244 g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l------N~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 244 GLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL------NWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh------HHHHHHHHHHHHHHh
Confidence 2222222222222222233345555555555555667888999999999999999 999999999998875
No 103
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.74 E-value=0.44 Score=41.47 Aligned_cols=129 Identities=18% Similarity=0.206 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC--CChHHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCcHHHHHHHHHHHHHHHHH
Q 019865 9 MVTLEFLDVGLNTVTKAAMSRG--ASHFILVVYSNTLAIFLLVPSSFIFYRKRTP----PQLTWSIVCRIFLLGLLSCCG 82 (334)
Q Consensus 9 ~l~~~~~wg~~~~~~k~~~~~~--~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~ 82 (334)
+++.-..-|.+...... ...+ -+.-.+.++-++-+.+.+..-+++.+. .+. .......++.+...|+.++++
T Consensus 177 L~lSL~mDGlTg~~Qdr-ira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGE-lweF~yF~~RhP~~~~~l~l~ai~s~LG 254 (337)
T KOG1580|consen 177 LILSLAMDGLTGSIQDR-IRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGE-LWEFFYFVQRHPYVFWDLTLLAIASCLG 254 (337)
T ss_pred HHHHHHhcccchhHHHH-HHHhhccCchhhHHHHHHHHHHHhhhhheehhh-HHHHHHHHHhccHHHHHHHHHHHHHHhh
Confidence 34444455555555443 1212 234456666666666655544443321 000 001123344566778888999
Q ss_pred HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
+.+.|.-..+-++-.-+++..+--.|+.+.+.++++..++.| ||+|..+.+.|...=
T Consensus 255 Q~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 255 QWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTAD 311 (337)
T ss_pred hHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhH
Confidence 999999999999999999999999999999999999999999 999999999887654
No 104
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=90.40 E-value=1.9 Score=37.35 Aligned_cols=136 Identities=16% Similarity=0.140 Sum_probs=98.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHHHHHHHHHHhhccCC---CCCCcHHHHHHHHHHHHHHH
Q 019865 5 VTAAMVTLEFLDVGLNTVTKAAMS-RGASHFILVVYSNTLAIFLLVPSSFIFYRKRT---PPQLTWSIVCRIFLLGLLSC 80 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~~~~-~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~ 80 (334)
+|+++..-++.=+..-..+|.-.. .+..-++-.++..+++...+..+.++.+.+.. ...++...+.+.++.|+...
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 455555544444444444554111 34556788899999999888888776554322 12344555567888888886
Q ss_pred HHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHHH
Q 019865 81 CGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIVT 146 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll~ 146 (334)
.-.++--|..+-+++..-+.+..++-.-..+-+.++++|+.+.. .+.++.+++....+-.
T Consensus 236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa 295 (309)
T COG5070 236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA 295 (309)
T ss_pred hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence 66678889999999999899988888888888999999999999 9999999987766653
No 105
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=89.46 E-value=7.7 Score=29.41 Aligned_cols=116 Identities=22% Similarity=0.249 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCCChHHH--HHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHHHHHH
Q 019865 6 TAAMVTLEFLDVGLNTVTKAAMSRGASHFIL--VVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLSCCGQ 83 (334)
Q Consensus 6 ~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~--~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 83 (334)
...++...++||.++++.|.+ +.+++..-- .-+|.++ +.-+. --.+++. .+--.++-.+.
T Consensus 5 ~~~lvaVgllWG~Tnplirrg-s~g~~~v~~~~~k~~~~l-----------qe~~t--l~l~w~Y----~iPFllNqcgS 66 (125)
T KOG4831|consen 5 MDKLVAVGLLWGATNPLIRRG-SLGWDKVKSSSRKIMIAL-----------QEMKT--LFLNWEY----LIPFLLNQCGS 66 (125)
T ss_pred HHHHHHHHHHHccccHHHHHH-HhhHhhccCchHHHHHHH-----------HHHHH--HHHhHHH----HHHHHHHHhhH
Confidence 456788899999999999984 323322110 1122110 01000 1122332 22333445566
Q ss_pred HHHHHHhhccCchhhhhhhh-hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 84 MFHYFGIENGSPALASAMID-LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 84 ~~~~~al~~~~~~~a~~i~~-~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
.+||.-+++++-+.+..+.+ +.-.|+.+.+..+..|...++ ..+|..+.++|+.+.
T Consensus 67 aly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 67 ALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhe
Confidence 78999999999999998866 556788888887766667777 889999888887764
No 106
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=83.84 E-value=0.89 Score=34.35 Aligned_cols=32 Identities=16% Similarity=0.126 Sum_probs=27.2
Q ss_pred HHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 284 LVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 284 ~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
..++.++++|++++.++.|..+++.+++.+.|
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fiFr 108 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFIFR 108 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhheeeC
Confidence 45677899999999999999999988876543
No 107
>PRK02237 hypothetical protein; Provisional
Probab=81.94 E-value=4 Score=31.10 Aligned_cols=42 Identities=7% Similarity=-0.099 Sum_probs=34.9
Q ss_pred EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 273 SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 273 s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
+.+.-+-.+.++++++.+-|++|+..+++|..+.+.|+.++.
T Consensus 63 AAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 63 AAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred HHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 344455677889999999999999999999999999886653
No 108
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=79.68 E-value=0.98 Score=40.34 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=62.8
Q ss_pred HHHHHHHhccCCceEEEeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhhhhHHhhhhhhhhhhh
Q 019865 257 SVFHTWALRKKGPVYVSMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRINKVEIMMNFVCACAVLL 330 (334)
Q Consensus 257 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~~~~~~~~~~~~~~~~ 330 (334)
-.+.+..++..|.+..-+--.+..++++++.+++++++=+..-+.+|.+|+.|..+-..+|...+-+.-.|++.
T Consensus 116 I~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~Gvif 189 (347)
T KOG1442|consen 116 ISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIF 189 (347)
T ss_pred hhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHH
Confidence 45677889999999999999999999999999999999999999999999999988888776555555555544
No 109
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=78.97 E-value=5.5 Score=30.17 Aligned_cols=58 Identities=14% Similarity=-0.036 Sum_probs=45.4
Q ss_pred HHHHHHHHhccCCceEEEeccc-hHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhh
Q 019865 256 RSVFHTWALRKKGPVYVSMFKP-LGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRI 313 (334)
Q Consensus 256 ~~~l~~~al~~~~a~~~s~~~~-l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~ 313 (334)
+..+|++-+++.+-+.+.++.+ +.-.++.+.+..+-.|...-..++|..++++|+.+.
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 4567788889999998877765 466677888887555666677899999999998864
No 110
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=74.97 E-value=16 Score=33.85 Aligned_cols=138 Identities=14% Similarity=0.060 Sum_probs=76.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHH-HHHHHHHHHHHHHHH--hccCCC-CcccccCCchhhHHHHH
Q 019865 173 NWTIGGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTL-ICSIFVTILSSAVSL--VAEKNP-NAWRLRPDIELMAIGYS 248 (334)
Q Consensus 173 ~~~~G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~-~~~l~~~i~~~~~~l--~~~~~~-~~~~~~~~~~~~~ll~~ 248 (334)
+...|.++-.+++++-+.+.+=.||. |+.+ .+... .+.+++-+ ..|... ..-++. +.....+..++....+.
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws--WEs~Wlv~gi~swl-i~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS--WESYWLVQGIFSWL-IVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc--HHHHHHHHHHHHHH-HHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 45789999999999999998877764 4543 33332 23333333 233222 221221 11121222344444444
Q ss_pred HHHHHHHHHHHHHHHhccCCceEE-EeccchHHHHHHHHHHHHhC-------CcccchhhhhhHHHHhhHHhhhh
Q 019865 249 AIFAVSVRSVFHTWALRKKGPVYV-SMFKPLGMVVALVFGIAFLG-------DTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 249 gi~~t~~~~~l~~~al~~~~a~~~-s~~~~l~Pv~a~~~~~l~l~-------E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
|+ -=+++-..|-.++|++|.+.. ++..-+.-+++.++--++.| ++-....++|..+.+.|+.+..+
T Consensus 80 G~-lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~ 153 (344)
T PF06379_consen 80 GV-LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK 153 (344)
T ss_pred HH-HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence 44 234566777788888887743 33333444444444334433 22234678888888999988874
No 111
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.91 E-value=5 Score=29.91 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCcccchhhhhhHHHHhhHHhhhh
Q 019865 282 VALVFGIAFLGDTLYLGRCVCMILRGLQFLRINK 315 (334)
Q Consensus 282 ~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~~ 315 (334)
+-..++.+.++|++.+.++.|..++..|++++.|
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiFr 115 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIFR 115 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhcc
Confidence 3456788999999999999999999999988765
No 112
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=73.81 E-value=34 Score=30.87 Aligned_cols=111 Identities=15% Similarity=0.165 Sum_probs=80.5
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHhhccCCC----CCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhhhhhhhh
Q 019865 29 RGASHFILVVYSNTLAIFLLVPSSFIFYRKRTP----PQLTWSIVCRIFLLGLLSCCGQMFHYFGIENGSPALASAMIDL 104 (334)
Q Consensus 29 ~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~a~~i~~~ 104 (334)
+.-+..+++++...++..+++..+...+.-... .+-+++...+.++.++.+.++......=++.-++..++.+...
T Consensus 216 ~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTa 295 (367)
T KOG1582|consen 216 NPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTA 295 (367)
T ss_pred CCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHh
Confidence 345677889999999998888777665431110 0123455566666666665555555555556677777777777
Q ss_pred hhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 105 TPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 105 ~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
---.+.+++++++.++++-+ ...+..+.+.|+.+=
T Consensus 296 RKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln 330 (367)
T KOG1582|consen 296 RKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLN 330 (367)
T ss_pred HhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhh
Confidence 88899999999999999999 999999999998875
No 113
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=72.50 E-value=8 Score=29.41 Aligned_cols=42 Identities=12% Similarity=0.007 Sum_probs=35.0
Q ss_pred EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 273 SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 273 s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
+.+.-+-.+.++++++.+-|++|+..+++|..+.+.|+.++.
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 344455677889999999999999999999999999887654
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=63.10 E-value=1.1e+02 Score=27.86 Aligned_cols=135 Identities=12% Similarity=0.117 Sum_probs=86.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHHHHHHHHHHH----HHHHHHhhc-cCC-CCCCcHHHHHH------
Q 019865 5 VTAAMVTLEFLDVGLNTVTKA-AMSRGASHFILVVYSNTLAIFLL----VPSSFIFYR-KRT-PPQLTWSIVCR------ 71 (334)
Q Consensus 5 ~~~~~l~~~~~wg~~~~~~k~-~~~~~~~p~~~~~~R~~~a~l~l----~~~~~~~~~-~~~-~~~~~~~~~~~------ 71 (334)
+.++.+.+.++-+.-.+.=.+ .-..+++|.+.+.|.-+.+..++ .|+.+..-. ... -++-.+.++..
T Consensus 177 GdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~ 256 (372)
T KOG3912|consen 177 GDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQ 256 (372)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhc
Confidence 456778888888888877553 22357999999999877774332 333222111 110 02222333322
Q ss_pred ------HHHHHHHH--HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHH
Q 019865 72 ------IFLLGLLS--CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL 143 (334)
Q Consensus 72 ------~~~~g~~~--~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ 143 (334)
....|..- +.++..-.+-.++.|+++=.++...-..+.-+++..+..|++... |++|.++-..|++
T Consensus 257 e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~ll------qilGFliLi~Gi~ 330 (372)
T KOG3912|consen 257 ESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLL------QILGFLILIMGII 330 (372)
T ss_pred CCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 22222222 222222223346678888888888888888899999999999999 9999999999998
Q ss_pred HH
Q 019865 144 IV 145 (334)
Q Consensus 144 ll 145 (334)
+-
T Consensus 331 lY 332 (372)
T KOG3912|consen 331 LY 332 (372)
T ss_pred HH
Confidence 75
No 115
>PRK02237 hypothetical protein; Provisional
Probab=58.95 E-value=12 Score=28.48 Aligned_cols=35 Identities=6% Similarity=0.080 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 105 TPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 105 ~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
.-+...+..+..-|+|+++. .++|..++++|+.++
T Consensus 69 yI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI 103 (109)
T PRK02237 69 YVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVI 103 (109)
T ss_pred HHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHh
Confidence 34445577888899999999 999999999999887
No 116
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.20 E-value=10 Score=28.85 Aligned_cols=36 Identities=8% Similarity=0.105 Sum_probs=30.7
Q ss_pred hhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 104 LTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 104 ~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
..-+...+..+.+-|+|+++. .++|..++++|+.++
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAII 101 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHhe
Confidence 344556677888899999999 999999999999988
No 117
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=56.76 E-value=69 Score=26.43 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=52.0
Q ss_pred HHHHhhccceeeeccccchhhHHHH-------HHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHH
Q 019865 113 AIIFRMEKLELRVQSSQAKSFGTVL-------LIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHS 185 (334)
Q Consensus 113 a~~~~~e~~~~~~~~~~~~~~g~~l-------~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa 185 (334)
...+.|..++.. +.+|+.+ ++.|+.++.. .++.+......+.+.++
T Consensus 89 Em~v~KtsP~LY------r~LGIfLPLITTNCaVLgvaLln~---------------------~~~~~f~qsv~~gf~a~ 141 (193)
T COG4657 89 EMVVRKTSPTLY------RLLGIFLPLITTNCAVLGVALLNI---------------------NEGHNFLQSVVYGFGAA 141 (193)
T ss_pred HHHHHccCHHHH------HHHHHhhhhHhhchHHHHHHHHHh---------------------hhhhhHHHHHHHHhhhH
Confidence 344556666666 7777775 4457777622 12344566788999999
Q ss_pred HHHHHHHHHHHHHHhh-----CCchHHHHHHHHHHHHHHHHHH
Q 019865 186 VILAIYYIVQAWIVRD-----YPAELMVTLICSIFVTILSSAV 223 (334)
Q Consensus 186 ~~~a~~~v~~~~~~~~-----~~~~~~~~~~~~l~~~i~~~~~ 223 (334)
+.|++..++..-.++| .|.|..-..+.++.+++++..+
T Consensus 142 lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 142 LGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 9999988877665543 3345544555555555544443
No 118
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=46.87 E-value=11 Score=34.38 Aligned_cols=112 Identities=14% Similarity=0.016 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHh----hc--cCC------CCCCcHHHHHHHHHHH
Q 019865 9 MVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIF----YR--KRT------PPQLTWSIVCRIFLLG 76 (334)
Q Consensus 9 ~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~----~~--~~~------~~~~~~~~~~~~~~~g 76 (334)
|+++.+|||+.....|++ .+.....+...|-+.++.++...+.-+. ++ ... ...-+++.+...+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~-~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLA-ERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHH-HhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 467889999999999995 4444444456666666666555544332 11 011 0122455555555566
Q ss_pred HHHHHHHHHHHHHhhccCchhhhhhhhhhh-HHHHHHHHHHhhccce
Q 019865 77 LLSCCGQMFHYFGIENGSPALASAMIDLTP-GFTFILAIIFRMEKLE 122 (334)
Q Consensus 77 ~~~~~~~~~~~~al~~~~~~~a~~i~~~~P-~~~~lla~~~~~e~~~ 122 (334)
.+..+++++..+|+.+.+.+.+-.+..... +.-+.+-+ ++..|.+
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NY-fld~~~n 125 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNY-FLDPKIN 125 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeee-eccCCCC
Confidence 666888999999999998888777754332 33333333 3345554
No 119
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=39.54 E-value=2.3e+02 Score=23.71 Aligned_cols=26 Identities=23% Similarity=0.087 Sum_probs=13.2
Q ss_pred hhhhhhhhhhHHHH-HHHHHHhhccce
Q 019865 97 LASAMIDLTPGFTF-ILAIIFRMEKLE 122 (334)
Q Consensus 97 ~a~~i~~~~P~~~~-lla~~~~~e~~~ 122 (334)
......+..|+... ++...+.++|..
T Consensus 59 ~~~~~~~~~P~a~~~~l~~~l~~~~~a 85 (194)
T PF07698_consen 59 DISYFPYLIPVAAAAMLLTILIDPRLA 85 (194)
T ss_pred cchhhhhhhHHHHHHHHHHHHhcchHH
Confidence 44555666664443 344455555444
No 120
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=38.28 E-value=3.4e+02 Score=25.42 Aligned_cols=133 Identities=13% Similarity=0.059 Sum_probs=82.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCC---CC-cHHHHHHHHHHHHHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPP---QL-TWSIVCRIFLLGLLS 79 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~---~~-~~~~~~~~~~~g~~~ 79 (334)
.++.+.+.++++-|...+-....+.++-.+..+=-.|+-.-++++.....+.....+.. -+ .+. +..+.-.+.
T Consensus 183 ~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s---~~vw~vVl~ 259 (345)
T KOG2234|consen 183 LGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYS---SIVWLVVLL 259 (345)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccc---HHHHHHHHH
Confidence 35667777777777777766664655445555555555444444433333222211100 00 111 112222222
Q ss_pred -HHHHHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 80 -CCGQMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 80 -~~~~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
+.+-++.-.-++|.+--.=....+.+-+++.+.++.+++.+++.. ..+|+.+.+..+.+-
T Consensus 260 ~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~------F~lG~~lVi~Si~lY 320 (345)
T KOG2234|consen 260 NAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLY------FLLGALLVILSIFLY 320 (345)
T ss_pred HhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHH------HHHHHHHHHHHHHHh
Confidence 444555566678887777777777888999999999999999999 999999888887776
No 121
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=37.41 E-value=1.9e+02 Score=22.11 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=41.7
Q ss_pred HHHHHHHHH-HHHHHHHHH-----HhhccCchhhhhhhhhhh-HHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHH
Q 019865 71 RIFLLGLLS-CCGQMFHYF-----GIENGSPALASAMIDLTP-GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGAL 143 (334)
Q Consensus 71 ~~~~~g~~~-~~~~~~~~~-----al~~~~~~~a~~i~~~~P-~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ 143 (334)
+..++..-+ +..-+++.. |.+.-|.++--+++-... ..-+.++.+++||++++. +..|.+..+.++.
T Consensus 31 ~~ail~SWgIAffEY~l~VPANRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~ 104 (108)
T PF04342_consen 31 WIAILISWGIAFFEYCLQVPANRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWN------YLWAFLCILGAVY 104 (108)
T ss_pred HHHHHHHHHHHHHHHHHhCcchhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHH------HHHHHHHHHHhhh
Confidence 344444455 555555553 444445555555544332 333466788999999999 9998877766655
Q ss_pred H
Q 019865 144 I 144 (334)
Q Consensus 144 l 144 (334)
.
T Consensus 105 f 105 (108)
T PF04342_consen 105 F 105 (108)
T ss_pred e
Confidence 4
No 122
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=37.01 E-value=3.5e+02 Score=25.22 Aligned_cols=23 Identities=0% Similarity=-0.286 Sum_probs=12.7
Q ss_pred chhhhhhHHHHhhHHhhhhhhHH
Q 019865 297 LGRCVCMILRGLQFLRINKVEIM 319 (334)
Q Consensus 297 ~~~~iG~~lIi~g~~l~~~~~~~ 319 (334)
....+++.+.+.++++..+.++.
T Consensus 370 ~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 370 GFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 33555666666666665544433
No 123
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=34.82 E-value=61 Score=24.59 Aligned_cols=42 Identities=7% Similarity=-0.120 Sum_probs=33.8
Q ss_pred EeccchHHHHHHHHHHHHhCCcccchhhhhhHHHHhhHHhhh
Q 019865 273 SMFKPLGMVVALVFGIAFLGDTLYLGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 273 s~~~~l~Pv~a~~~~~l~l~E~l~~~~~iG~~lIi~g~~l~~ 314 (334)
+.+.-+-.+.++.+.+++-|.+|+..+++|..+-++|+.++.
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil 103 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVIL 103 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeE
Confidence 445556678899999999999999999999887778865543
No 124
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=34.35 E-value=1.2e+02 Score=27.03 Aligned_cols=50 Identities=8% Similarity=0.082 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhcc
Q 019865 177 GGIFLAAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVAE 228 (334)
Q Consensus 177 G~~~~l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~ 228 (334)
|.+.++.|+++|+...+=.||.... |++-.-..+.....+......+..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~ 50 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILG 50 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4567888888888888777765433 3554444433333334444444433
No 125
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=34.30 E-value=5.8e+02 Score=26.87 Aligned_cols=44 Identities=18% Similarity=0.138 Sum_probs=30.5
Q ss_pred hhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 96 ALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 96 ~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
+.+.++..++|.-.+.++.....+|.+.+ .+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 56677888999999988888766665444 556555555665544
No 126
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=29.79 E-value=32 Score=26.03 Aligned_cols=33 Identities=6% Similarity=0.159 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 107 GFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 107 ~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
....+..+..-+.++++. .+.|..+|++|+.++
T Consensus 70 ~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vi 102 (109)
T COG1742 70 AASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVI 102 (109)
T ss_pred HHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeee
Confidence 344455677788899999 999999999998877
No 127
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=28.51 E-value=65 Score=29.54 Aligned_cols=130 Identities=8% Similarity=-0.045 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHHHHHHHHHHHhc-cC-------CCCcccccCCchhhHH---HHHHH
Q 019865 182 AAHSVILAIYYIVQAWIVRDYPAELMVTLICSIFVTILSSAVSLVA-EK-------NPNAWRLRPDIELMAI---GYSAI 250 (334)
Q Consensus 182 l~aa~~~a~~~v~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~l~~-~~-------~~~~~~~~~~~~~~~l---l~~gi 250 (334)
+++.+||+.+-..+|-..++...| ..+.|=+.++-++..++..++ +. .++-++-.....|-.+ ..-|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 456789999998888887654312 224444444443333222221 11 0111111111122222 22233
Q ss_pred HHHHHHHHHHHHHhccCCceEEEecc-chHHHHHHHHHHHHhCCccc--chhhhhhHHHHhhHHhhh
Q 019865 251 FAVSVRSVFHTWALRKKGPVYVSMFK-PLGMVVALVFGIAFLGDTLY--LGRCVCMILRGLQFLRIN 314 (334)
Q Consensus 251 ~~t~~~~~l~~~al~~~~a~~~s~~~-~l~Pv~a~~~~~l~l~E~l~--~~~~iG~~lIi~g~~l~~ 314 (334)
.--++-.+..+++...|-+.+-++. .+.-+.++.+-|+ ++++.+ ..-+.|..+++.++++-.
T Consensus 81 -vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 81 -VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred -hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 3334566667777777777664443 2334445666664 455554 255667777777766543
No 128
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=27.79 E-value=20 Score=32.31 Aligned_cols=36 Identities=8% Similarity=0.210 Sum_probs=0.0
Q ss_pred HHHHhhccCchhhhhhhhhhhHHHHHHHH-HHhhccc
Q 019865 86 HYFGIENGSPALASAMIDLTPGFTFILAI-IFRMEKL 121 (334)
Q Consensus 86 ~~~al~~~~~~~a~~i~~~~P~~~~lla~-~~~~e~~ 121 (334)
+|.-++-.+-+...++.+.+-++++++-+ +++|+|+
T Consensus 40 ~~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrL 76 (381)
T PF05297_consen 40 FFIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRL 76 (381)
T ss_dssp -------------------------------------
T ss_pred HHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33444555556666777777666555543 4455553
No 129
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=27.41 E-value=32 Score=27.72 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=14.9
Q ss_pred cCCceEEEeccchHHHHHHHHHHHH
Q 019865 266 KKGPVYVSMFKPLGMVVALVFGIAF 290 (334)
Q Consensus 266 ~~~a~~~s~~~~l~Pv~a~~~~~l~ 290 (334)
..+.-+.+.+.|+.|.++++.+.++
T Consensus 71 EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 71 EKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445556667777776666544
No 130
>PF11139 DUF2910: Protein of unknown function (DUF2910); InterPro: IPR021315 Some members in this bacterial family annotate the proteins as cytochrome C biogenesis proteins however this cannot be confirmed. Currently no function for this family is known.
Probab=27.28 E-value=3.9e+02 Score=22.78 Aligned_cols=65 Identities=22% Similarity=0.216 Sum_probs=40.9
Q ss_pred HHHHHHHHHhhccCchhhh-----------hhhhhhhHHHHHHHHHHhhcccee-------eeccccchhhHHHHHHHHH
Q 019865 81 CGQMFHYFGIENGSPALAS-----------AMIDLTPGFTFILAIIFRMEKLEL-------RVQSSQAKSFGTVLLIGGA 142 (334)
Q Consensus 81 ~~~~~~~~al~~~~~~~a~-----------~i~~~~P~~~~lla~~~~~e~~~~-------~~~~~~~~~~g~~l~l~Gv 142 (334)
-....|..+......+..+ ....+.|....++.....+||... +...+..+..+.++.++|+
T Consensus 127 ~~~~~~laa~~~I~~~~~~~~~~~~~l~~y~~i~~~~~~~pll~~~~~~~r~~~~l~r~~~wl~~~~~~i~~~i~~i~G~ 206 (214)
T PF11139_consen 127 KTMLPYLAAIAIIAASGLSPGTQVVALVVYCLIASLPALLPLLAYLVAPERAEPWLERLRSWLRRHSRQILAVILLIVGA 206 (214)
T ss_pred ccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 4446666666554443322 223466788888888877766532 2233444788889999999
Q ss_pred HHH
Q 019865 143 LIV 145 (334)
Q Consensus 143 ~ll 145 (334)
.++
T Consensus 207 ~l~ 209 (214)
T PF11139_consen 207 LLL 209 (214)
T ss_pred HHH
Confidence 887
No 131
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=24.78 E-value=99 Score=25.28 Aligned_cols=29 Identities=24% Similarity=0.356 Sum_probs=19.9
Q ss_pred HhhccCchhhhhhhhhhhHHHHHHHHHHh
Q 019865 89 GIENGSPALASAMIDLTPGFTFILAIIFR 117 (334)
Q Consensus 89 al~~~~~~~a~~i~~~~P~~~~lla~~~~ 117 (334)
++...+.-.++.+.|..|++..+.+..+.
T Consensus 68 ~i~e~~llkaa~lvYllPLl~li~ga~l~ 96 (154)
T PRK10862 68 GIAEGSLLRSALLVYMTPLVGLFLGAALF 96 (154)
T ss_pred ecchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555678888889988888765553
No 132
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=24.48 E-value=50 Score=18.96 Aligned_cols=22 Identities=27% Similarity=0.197 Sum_probs=11.4
Q ss_pred cchhhhhhHHHHhhHHhhhhhh
Q 019865 296 YLGRCVCMILRGLQFLRINKVE 317 (334)
Q Consensus 296 ~~~~~iG~~lIi~g~~l~~~~~ 317 (334)
++..++|..++..+.++..+++
T Consensus 11 ~~~~~~G~~l~~~~~~~~~~rk 32 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLLLRKRK 32 (34)
T ss_pred HHHHHHHHHHHHHHHHHheecc
Confidence 3455666655555544444443
No 133
>COG1575 MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]
Probab=23.93 E-value=5.7e+02 Score=23.51 Aligned_cols=47 Identities=9% Similarity=-0.148 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhccCCCCcccccCCchhhHHHHHHHHHHHHHHHHH
Q 019865 213 SIFVTILSSAVSLVAEKNPNAWRLRPDIELMAIGYSAIFAVSVRSVFH 260 (334)
Q Consensus 213 ~l~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~ll~~gi~~t~~~~~l~ 260 (334)
...|.++...-...++++ ......+--+....++.|.+....+|+.+
T Consensus 124 l~lG~l~~~~g~~YTgGp-~PlgY~gLGEi~~~vffG~l~v~g~~yiq 170 (303)
T COG1575 124 LLLGLLCIAAGILYTGGP-FPLGYMGLGEIFVGVFFGPLIVLGAYYIQ 170 (303)
T ss_pred HHHHHHHHHheeeeccCC-cCcccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555555444455543 22333333477778888888777777766
No 134
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=23.34 E-value=4.9e+02 Score=23.68 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=39.4
Q ss_pred hhhHHHHHHHHHHHHHHhcCCCCCCCCCCcccccccccCCCcchhhHHHHHHHHHHHHHH----HH---HH-HHHHHhhC
Q 019865 131 KSFGTVLLIGGALIVTLYKGLPITSAPSKNKLINELVQLPLSNWTIGGIFLAAHSVILAI----YY---IV-QAWIVRDY 202 (334)
Q Consensus 131 ~~~g~~l~l~Gv~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~a~----~~---v~-~~~~~~~~ 202 (334)
.+.|..++..|+..+ +..-+. ..+.....|..+..++.+.|.. +. +. -|+..+|.
T Consensus 6 ~~f~~~mGtg~l~~~-~~~~~~----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~el 68 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNL-LYLLPY----------------HFGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAFKAEL 68 (330)
T ss_dssp GGGHHHHHHHHHHHH-HHTTTT----------------TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHH----------------hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 688999999998887 321110 1233345677777777776666 22 11 22233344
Q ss_pred CchHHHHHHHHHHHHHHH
Q 019865 203 PAELMVTLICSIFVTILS 220 (334)
Q Consensus 203 ~~~~~~~~~~~l~~~i~~ 220 (334)
.||....++.....+...
T Consensus 69 ~~p~~~~f~~t~~m~~~~ 86 (330)
T PF03595_consen 69 RHPVRSSFFPTFPMALML 86 (330)
T ss_dssp HSTTGGGGGGHHHHHHHH
T ss_pred cCCcccchHHHHHHHHHH
Confidence 446655554444444433
No 135
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=22.64 E-value=1.4e+02 Score=24.16 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=24.3
Q ss_pred HhhccCchhhhhhhhhhhHHHHHHHHHHhhccceee
Q 019865 89 GIENGSPALASAMIDLTPGFTFILAIIFRMEKLELR 124 (334)
Q Consensus 89 al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~ 124 (334)
++..-+.-.++.+.|+.|++..+++.++. +++...
T Consensus 68 Gi~EkslL~sA~LvYi~PL~~l~v~~~La-~~L~~~ 102 (150)
T COG3086 68 GIEEKSLLKSALLVYIFPLVGLFLGAILA-QYLFFS 102 (150)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHH-HHHhhh
Confidence 44455666788899999999988877663 344444
No 136
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=21.20 E-value=1.8e+02 Score=26.16 Aligned_cols=131 Identities=11% Similarity=0.067 Sum_probs=71.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCcHHHHHHHHHHHHHH-HHH
Q 019865 4 SVTAAMVTLEFLDVGLNTVTKAAMSRGASHFILVVYSNTLAIFLLVPSSFIFYRKRTPPQLTWSIVCRIFLLGLLS-CCG 82 (334)
Q Consensus 4 ~~~~~~l~~~~~wg~~~~~~k~~~~~~~~p~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~ 82 (334)
|+-+.++..+-+.+.+++.-.. +..+.|-.++...--+.+++.-.+-.. ..++.. ..+.|..-....+...+. ++.
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEf-lvkn~d~~elm~~lgLfGaIIsaIQ~i-~~~~~~-~tl~w~~~i~~yl~f~L~MFll 242 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEF-LVKNADRVELMGFLGLFGAIISAIQFI-FERHHV-STLHWDSAIFLYLRFALTMFLL 242 (336)
T ss_pred cCcEEEEecceeeeeccccHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHh-hhccce-eeEeehHHHHHHHHHHHHHHHH
Confidence 4455566777788888888887 456788888777777777776555433 333322 333332112222222222 222
Q ss_pred HHHHHHHhhccCchhhhhhhhhhhHHHHHHHHHHhhccceeeeccccchhhHHHHHHHHHHHH
Q 019865 83 QMFHYFGIENGSPALASAMIDLTPGFTFILAIIFRMEKLELRVQSSQAKSFGTVLLIGGALIV 145 (334)
Q Consensus 83 ~~~~~~al~~~~~~~a~~i~~~~P~~~~lla~~~~~e~~~~~~~~~~~~~~g~~l~l~Gv~ll 145 (334)
+.+.-.=++..+++.-.+=.-++-.+..++ ..++-++++. -.++......|.++-
T Consensus 243 Ysl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL------Y~laF~~i~~GliiY 297 (336)
T KOG2766|consen 243 YSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL------YFLAFATIATGLIIY 297 (336)
T ss_pred HHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh------hHHHHHHHHHhhEEe
Confidence 222223344444443333333344444444 3445568888 788888888887765
Done!