Query 019867
Match_columns 334
No_of_seqs 147 out of 1534
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 08:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 7.2E-80 2.5E-84 624.1 22.5 330 2-334 145-514 (546)
2 1kp8_A Groel protein; chaperon 100.0 5.8E-79 2E-83 618.5 27.4 332 2-334 145-516 (547)
3 1iok_A Chaperonin 60; chaperon 100.0 9E-79 3.1E-83 617.2 25.1 334 1-334 145-518 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 1.2E-77 4E-82 609.1 30.2 332 2-334 145-518 (543)
5 3p9d_C T-complex protein 1 sub 100.0 1.5E-65 5.2E-70 523.9 18.1 308 9-334 166-579 (590)
6 3iyg_B T-complex protein 1 sub 100.0 2E-61 6.7E-66 488.1 27.1 279 9-334 161-504 (513)
7 3p9d_A T-complex protein 1 sub 100.0 9.5E-62 3.3E-66 494.5 22.2 291 2-334 158-541 (559)
8 3aq1_B Thermosome subunit; gro 100.0 2.5E-61 8.6E-66 485.9 24.5 282 6-334 116-469 (500)
9 3ruv_A Chaperonin, CPN; double 100.0 3.2E-61 1.1E-65 489.4 24.4 286 2-334 152-512 (543)
10 3iyg_D T-complex protein 1 sub 100.0 1.8E-60 6.1E-65 481.6 27.6 287 2-334 144-511 (518)
11 3iyg_H T-complex protein 1 sub 100.0 1.2E-60 4.1E-65 482.4 25.8 280 8-334 160-507 (515)
12 1q3q_A Thermosome alpha subuni 100.0 7.7E-61 2.6E-65 487.0 24.5 282 6-334 166-518 (548)
13 3ko1_A Chaperonin; 9-fold symm 100.0 4.7E-61 1.6E-65 488.6 22.9 286 2-334 163-526 (553)
14 1a6d_A Thermosome (alpha subun 100.0 6.1E-61 2.1E-65 487.5 23.7 282 6-334 163-515 (545)
15 1a6d_B Thermosome (beta subuni 100.0 1.5E-60 5.1E-65 484.6 23.3 282 6-334 164-516 (543)
16 3iyg_Q T-complex protein 1 sub 100.0 7.3E-60 2.5E-64 476.7 26.3 287 2-334 146-505 (512)
17 3iyg_E T-complex protein 1 sub 100.0 1.4E-59 4.8E-64 474.9 25.6 263 25-334 205-508 (515)
18 3iyg_A T-complex protein 1 sub 100.0 1E-59 3.5E-64 477.1 23.9 291 2-334 144-521 (529)
19 3p9d_D T-complex protein 1 sub 100.0 2E-60 6.8E-65 482.1 18.5 289 2-334 152-521 (528)
20 3p9d_B T-complex protein 1 sub 100.0 7.8E-61 2.7E-65 485.3 13.6 286 2-334 155-511 (527)
21 3iyg_Z T-complex protein 1 sub 100.0 1.4E-58 4.7E-63 467.5 23.7 262 25-334 201-510 (517)
22 3iyg_G T-complex protein 1 sub 100.0 3.9E-58 1.3E-62 464.2 25.7 263 25-334 205-507 (515)
23 3p9d_G T-complex protein 1 sub 100.0 2.6E-59 9E-64 475.7 14.7 286 2-334 160-520 (550)
24 3p9d_E T-complex protein 1 sub 100.0 1.9E-58 6.5E-63 470.5 21.0 263 25-334 242-551 (562)
25 3p9d_F T-complex protein 1 sub 100.0 4.1E-59 1.4E-63 474.3 13.5 263 25-334 212-530 (546)
26 3p9d_H T-complex protein 1 sub 100.0 2.3E-59 7.8E-64 477.8 5.8 288 2-334 161-541 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 3.3E-49 1.1E-53 344.5 11.0 172 25-196 7-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 9.1E-49 3.1E-53 342.5 11.3 171 25-195 14-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 2.6E-39 9E-44 270.1 10.5 132 25-156 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.8 1.6E-19 5.6E-24 158.2 8.9 133 25-204 9-174 (178)
31 1ass_A Thermosome; chaperonin, 99.7 1.5E-17 5E-22 143.2 9.2 119 25-159 3-153 (159)
32 4fn4_A Short chain dehydrogena 36.5 1.2E+02 0.004 26.8 8.0 59 2-77 8-67 (254)
33 3dmp_A Uracil phosphoribosyltr 36.4 35 0.0012 29.8 4.4 73 32-105 124-208 (217)
34 4g81_D Putative hexonate dehyd 33.8 1E+02 0.0035 27.2 7.2 23 2-25 10-33 (255)
35 1g6h_A High-affinity branched- 32.6 34 0.0012 30.2 3.8 46 32-77 165-215 (257)
36 2lnd_A De novo designed protei 30.8 38 0.0013 25.0 3.1 33 49-81 35-67 (112)
37 1sgw_A Putative ABC transporte 30.6 42 0.0014 28.8 4.0 45 32-76 145-194 (214)
38 2buf_A Acetylglutamate kinase; 30.1 64 0.0022 29.2 5.3 59 165-236 9-71 (300)
39 2rd5_A Acetylglutamate kinase- 28.0 57 0.002 29.4 4.6 59 165-236 19-81 (298)
40 2bty_A Acetylglutamate kinase; 27.7 1.2E+02 0.004 27.0 6.6 49 184-236 14-66 (282)
41 2ki0_A DS119; beta-alpha-beta, 27.5 30 0.001 20.7 1.6 22 190-212 2-23 (36)
42 1ji0_A ABC transporter; ATP bi 27.5 40 0.0014 29.4 3.3 45 32-76 151-200 (240)
43 3ibs_A Conserved hypothetical 26.9 91 0.0031 25.8 5.4 19 105-123 176-194 (218)
44 2v5h_A Acetylglutamate kinase; 26.3 61 0.0021 29.7 4.5 49 184-236 42-94 (321)
45 2pcj_A ABC transporter, lipopr 26.2 43 0.0015 28.8 3.2 45 32-76 152-201 (224)
46 1b0u_A Histidine permease; ABC 26.0 42 0.0014 29.7 3.2 45 32-76 165-214 (262)
47 1vpl_A ABC transporter, ATP-bi 25.7 44 0.0015 29.6 3.2 45 32-76 158-207 (256)
48 2olj_A Amino acid ABC transpor 25.4 43 0.0015 29.8 3.1 46 32-77 171-221 (263)
49 3tif_A Uncharacterized ABC tra 25.3 45 0.0016 28.9 3.2 45 32-76 157-207 (235)
50 2yz2_A Putative ABC transporte 24.8 58 0.002 28.8 3.9 46 32-77 150-200 (266)
51 3gfo_A Cobalt import ATP-bindi 24.7 61 0.0021 29.0 4.0 46 32-77 155-206 (275)
52 1rq8_A Conserved hypothetical 23.1 59 0.002 25.0 3.1 67 56-124 8-76 (104)
53 2ap9_A NAG kinase, acetylgluta 23.1 1.3E+02 0.0045 26.9 6.0 60 164-236 7-70 (299)
54 1jo0_A Hypothetical protein HI 22.7 66 0.0022 24.4 3.2 67 56-124 9-77 (98)
55 2nq2_C Hypothetical ABC transp 22.3 59 0.002 28.6 3.3 46 32-77 140-191 (253)
56 2d2e_A SUFC protein; ABC-ATPas 21.2 43 0.0015 29.4 2.2 44 33-76 156-204 (250)
57 1vm6_A DHPR, dihydrodipicolina 20.8 1E+02 0.0035 27.1 4.5 99 12-117 22-128 (228)
58 2ihy_A ABC transporter, ATP-bi 20.5 69 0.0024 28.7 3.5 46 32-77 173-225 (279)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=7.2e-80 Score=624.13 Aligned_cols=330 Identities=35% Similarity=0.528 Sum_probs=319.1
Q ss_pred cEEEeecCCChhHhHHHHHHHhh-----------------------cceee-------ee-----eEEeecCeEEEeecc
Q 019867 2 KVGTTAANGDGEIGELIAKVFEK-----------------------GWEND-------LI-----TIFVLDGALVLIYDT 46 (334)
Q Consensus 2 ~va~isan~d~~~g~lia~a~~~-----------------------G~~~~-------~~-----~~~~l~~p~Ill~d~ 46 (334)
+||++|+| |+.+|++|++|+.+ ||.|| |+ |+++++|||||++|+
T Consensus 145 ~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~ 223 (546)
T 3rtk_A 145 ATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSS 223 (546)
T ss_dssp HHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSS
T ss_pred hHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECC
Confidence 68889998 89999999999987 88888 43 789999999999999
Q ss_pred CCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCC
Q 019867 47 KISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGS 126 (334)
Q Consensus 47 ~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~ 126 (334)
+|+++++++|+|+++.++|+||||++++|+++||++|+.|+++|++++++||+|+||+.|+++|+|||++|||+++++++
T Consensus 224 kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~ 303 (546)
T 3rtk_A 224 KVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEV 303 (546)
T ss_dssp EECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSS
T ss_pred ccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccch----hHHHHHhhhcCCeEEEEEccCC
Q 019867 127 GMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLKVCGHG 202 (334)
Q Consensus 127 ~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~----~l~eR~~~lsg~~~tI~vgG~t 202 (334)
|++++++++++||+|++|++++++++++++|++++.+..|+++|++++++++++ +|+||+++|+|++|||+|||+|
T Consensus 304 ~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~t 383 (546)
T 3rtk_A 304 GLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAAT 383 (546)
T ss_dssp SCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCS
T ss_pred cCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 999999999999999999999999999999999999999999999999999888 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCccccccHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-
Q 019867 203 KAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSV- 281 (334)
Q Consensus 203 ~~~~~E~~~~i~DAl~~~r~a~~~gvVpGGGaael~~s~~L~~~~~~~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~- 281 (334)
+.+++|+||+++||||++|+++++|+|||||++|++++..|++++ .++++|+|+++|++||+.||++||+|||+|+.+
T Consensus 384 e~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~v 462 (546)
T 3rtk_A 384 EVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVV 462 (546)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 999999999999999999999999999999999999999999887 688999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 282 IDKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 282 ~~kl~~~~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+.+|++. ..++|||+.+|+|+||++.|||||++||+++|++|+|+|++||||
T Consensus 463 v~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 463 AEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp HHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999986 455999999999999999999999999999999999999999986
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5.8e-79 Score=618.47 Aligned_cols=332 Identities=38% Similarity=0.563 Sum_probs=321.4
Q ss_pred cEEEeecCCChhHhHHHHHHHhh-----------------------cceee-------ee-----eEEeecCeEEEeecc
Q 019867 2 KVGTTAANGDGEIGELIAKVFEK-----------------------GWEND-------LI-----TIFVLDGALVLIYDT 46 (334)
Q Consensus 2 ~va~isan~d~~~g~lia~a~~~-----------------------G~~~~-------~~-----~~~~l~~p~Ill~d~ 46 (334)
+||++|+|+|+.+|+||++|+.+ ||.|| |+ |+++++|||||++|+
T Consensus 145 ~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~ 224 (547)
T 1kp8_A 145 QVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADK 224 (547)
T ss_dssp HHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEES
T ss_pred HHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcC
Confidence 67899999999999999999998 88888 43 788999999999999
Q ss_pred CCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCC
Q 019867 47 KISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGS 126 (334)
Q Consensus 47 ~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~ 126 (334)
+|+++++++|+|+++.++|+||||++++|+++||++|+.|+++|+++|+|||+|+||+.|+++|+|||++|||++++++.
T Consensus 225 ~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~ 304 (547)
T 1kp8_A 225 KISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEI 304 (547)
T ss_dssp EECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGG
T ss_pred cCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccch----hHHHHHhhhcCCeEEEEEccCC
Q 019867 127 GMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLKVCGHG 202 (334)
Q Consensus 127 ~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~----~l~eR~~~lsg~~~tI~vgG~t 202 (334)
|++++++++++||+|++|++++++++++++|++++.++.|+++|+.+++.++++ +|+||+++|+|++|||+|||+|
T Consensus 305 g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~t 384 (547)
T 1kp8_A 305 GMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAAT 384 (547)
T ss_dssp TCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSS
T ss_pred cCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCc
Confidence 999999999999999999999999999999999999999999999999999887 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCccccccHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-
Q 019867 203 KAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSV- 281 (334)
Q Consensus 203 ~~~~~E~~~~i~DAl~~~r~a~~~gvVpGGGaael~~s~~L~~~~~~~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~- 281 (334)
+.+++|+||+++||||++|+++++|+|||||++|++++..|++++..++++|+|+++|++||+.||++||+|||+|+.+
T Consensus 385 e~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~v 464 (547)
T 1kp8_A 385 EVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVV 464 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999999999999999999999999999999999999999998866678999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 282 IDKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 282 ~~kl~~~~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+.+|++. +.++|||+.+|+|+||++.|||||++||+++|++|+|+|++||||
T Consensus 465 v~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~i 516 (547)
T 1kp8_A 465 ANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITT 516 (547)
T ss_dssp HHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhH
Confidence 9999976 578999999999999999999999999999999999999999986
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=9e-79 Score=617.20 Aligned_cols=334 Identities=39% Similarity=0.591 Sum_probs=279.6
Q ss_pred CcEEEeecCCChhHhHHHHHHHhh-----------------------cceee-------ee-----eEEeecCeEEEeec
Q 019867 1 MKVGTTAANGDGEIGELIAKVFEK-----------------------GWEND-------LI-----TIFVLDGALVLIYD 45 (334)
Q Consensus 1 ~~va~isan~d~~~g~lia~a~~~-----------------------G~~~~-------~~-----~~~~l~~p~Ill~d 45 (334)
.+||++|+|+|+.+|++|++|+.+ ||.|| |+ |+++++|||||++|
T Consensus 145 ~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d 224 (545)
T 1iok_A 145 AQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHE 224 (545)
T ss_dssp THHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECS
T ss_pred HHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEc
Confidence 368899999999999999999998 88888 43 78899999999999
Q ss_pred cCCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCC
Q 019867 46 TKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGG 125 (334)
Q Consensus 46 ~~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~ 125 (334)
++|+++++++|+|+++.++|+||||++++|+++||++|+.|+++|+++|+|||+|+||+.|+++|+|||++|||++++++
T Consensus 225 ~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~ 304 (545)
T 1iok_A 225 KKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISED 304 (545)
T ss_dssp SCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC------
T ss_pred CCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccch----hHHHHHhhhcCCeEEEEEccC
Q 019867 126 SGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLKVCGH 201 (334)
Q Consensus 126 ~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~----~l~eR~~~lsg~~~tI~vgG~ 201 (334)
+|++++++++++||+|++|++++++++++++|++++.+++|++|++.+++.++++ +|+||+++|+|++|||+|||+
T Consensus 305 ~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~ 384 (545)
T 1iok_A 305 LGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGM 384 (545)
T ss_dssp ---------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCS
T ss_pred ccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCC
Confidence 9999999999999999999999999999999999999999999999999999887 999999999999999999999
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhcCccccccHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 019867 202 GKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSV 281 (334)
Q Consensus 202 t~~~~~E~~~~i~DAl~~~r~a~~~gvVpGGGaael~~s~~L~~~~~~~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~ 281 (334)
|+.+++|+||+++||||++|+++++|+|||||++|++++..|++++..++++|+|+++|++||+.||++||+|||+|+.+
T Consensus 385 te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~ 464 (545)
T 1iok_A 385 TEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAV 464 (545)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999998866678999999999999999999999999999999
Q ss_pred -HHHHHhcCCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 282 -IDKLLEQDSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 282 -~~kl~~~~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+.+|++..++++|||+.+|+|+||++.|||||++||+++|++|+++|++||||
T Consensus 465 vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~i 518 (545)
T 1iok_A 465 VAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITT 518 (545)
T ss_dssp HHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhH
Confidence 99998764578999999999999999999999999999999999999999986
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.2e-77 Score=609.14 Aligned_cols=332 Identities=38% Similarity=0.588 Sum_probs=320.7
Q ss_pred cEEEeecCCChhHhHHHHHHHhh-----------------------cceee-------ee-----eEEeecCeEEEeecc
Q 019867 2 KVGTTAANGDGEIGELIAKVFEK-----------------------GWEND-------LI-----TIFVLDGALVLIYDT 46 (334)
Q Consensus 2 ~va~isan~d~~~g~lia~a~~~-----------------------G~~~~-------~~-----~~~~l~~p~Ill~d~ 46 (334)
+||++|+| |+.+|+||++|+.+ ||.|| |+ |+++++|||||++|+
T Consensus 145 ~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~ 223 (543)
T 1we3_A 145 EVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEK 223 (543)
T ss_dssp HHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESS
T ss_pred HhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECC
Confidence 68889998 99999999999998 88888 43 778899999999999
Q ss_pred CCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCC
Q 019867 47 KISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGS 126 (334)
Q Consensus 47 ~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~ 126 (334)
+|+++++++|+|+++.++|+||||++++|+++||++|+.|+++|.++|+|||+|+||+.|+++|+|||++|||++++++.
T Consensus 224 ~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~ 303 (543)
T 1we3_A 224 KVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEEL 303 (543)
T ss_dssp CBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTT
T ss_pred CcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccch----hHHHHHhhhcCCeEEEEEccCC
Q 019867 127 GMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD----KLKDRLAKLSGGYAVLKVCGHG 202 (334)
Q Consensus 127 ~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~----~l~eR~~~lsg~~~tI~vgG~t 202 (334)
|++++++++++||+|++|++++++++++++|++++.++.|+++|+.+++.++++ +|+||+++|+|++|||+|||+|
T Consensus 304 g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~t 383 (543)
T 1we3_A 304 GFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAAT 383 (543)
T ss_dssp TCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred cCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCC
Confidence 999999999999999999999999999999999999999999999999999887 9999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhcCccccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Q 019867 203 KAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV 281 (334)
Q Consensus 203 ~~~~~E~~~~i~DAl~~~r~a~~~gvVpGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~ 281 (334)
+.+++|+||+++||||++|+++++|+|||||++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+|+.+
T Consensus 384 e~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~ 463 (543)
T 1we3_A 384 ETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSV 463 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Confidence 99999999999999999999999999999999999999999999876 89999999999999999999999999999999
Q ss_pred -HHHHHhc-CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 282 -IDKLLEQ-DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 282 -~~kl~~~-~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+.+|++. ++.++|||+.+|+|+||++.|||||++||+++|++|+|+|++||||
T Consensus 464 vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (543)
T 1we3_A 464 IVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTT 518 (543)
T ss_dssp HHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred HHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999974 4578999999999999999999999999999999999999999986
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.5e-65 Score=523.87 Aligned_cols=308 Identities=16% Similarity=0.174 Sum_probs=250.2
Q ss_pred CCChhHhHHHHHHHhh----------------------------------------cceee--ee---eEEeecCeEEEe
Q 019867 9 NGDGEIGELIAKVFEK----------------------------------------GWEND--LI---TIFVLDGALVLI 43 (334)
Q Consensus 9 n~d~~~g~lia~a~~~----------------------------------------G~~~~--~~---~~~~l~~p~Ill 43 (334)
++|+.+|+|+++|+.+ ||.|| +. |+.+++|||||+
T Consensus 166 ~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~en~kIll 245 (590)
T 3p9d_C 166 HWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVL 245 (590)
T ss_dssp GGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCEESCCEEC
T ss_pred ccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcceeeeeEEEE
Confidence 5689999999999875 33343 22 799999999999
Q ss_pred eccC-------------CCChHHHHHHh-----------hHHHHhCCcEEEEec-cccccchhhhhhcccCCcceEEEEe
Q 019867 44 YDTK-------------ISNSNVIRQAS-----------LPCMMQGQSLLVVAE-DVENEVLGDIATDFTCTTEKVCIIK 98 (334)
Q Consensus 44 ~d~~-------------i~~~~~i~~~l-----------e~i~~~~~~llIia~-~i~~~aL~~L~~n~~~g~~~v~aVk 98 (334)
+|++ |++++++.+++ +++.++| |+||+++ +|+++|+++|+.|++
T Consensus 246 ~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g-~~vII~e~~I~d~Al~~L~k~~I---------- 314 (590)
T 3p9d_C 246 LDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVR-PTLVITEKGVSDLAQHYLLKGGC---------- 314 (590)
T ss_dssp CCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTC-CSEECCSSCCCTHHHHHHHHTTC----------
T ss_pred EcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEecCCcCHHHHHHHHhccc----------
Confidence 9993 56778888876 5788887 6566655 699999999998753
Q ss_pred ccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCcee-eeEEE---EecceEEEEcCCCChhh------------
Q 019867 99 AAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVI---ATMDNVVIIGGSGELVD------------ 162 (334)
Q Consensus 99 ~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~---v~~~~~~~i~~~~~~~~------------ 162 (334)
+.+++.++++|+|||++|||+++++ ++++++++||+ |++|+ +++++|+++.+|++++.
T Consensus 315 -~av~~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~ 388 (590)
T 3p9d_C 315 -SVLRRVKKSDNNRIARVTGATIVNR-----VEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKG 388 (590)
T ss_dssp -CCCCCCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBCCCSEEECCEETTEECEEECC------------------
T ss_pred -eeeccCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccc
Confidence 3477889999999999999999998 99999999999 99996 67899999999999888
Q ss_pred --------------HHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhc-C
Q 019867 163 --------------IQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-G 227 (334)
Q Consensus 163 --------------i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~-g 227 (334)
|+.|+++++.+++.++++.. +++++|+|++|||+|||+|+.+++|+||+++||||++|+++++ |
T Consensus 389 ~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~-~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~ 467 (590)
T 3p9d_C 389 SGKRRWKKNFIAVSAANRFKKISSSGALGSGHHH-HHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPS 467 (590)
T ss_dssp ----------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred cchhhhhcchhhHHHHHHHHHHHHHHhccCCHHH-HHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999888743 4579999999999999999999999999999999999999987 7
Q ss_pred ccccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCce
Q 019867 228 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNY 302 (334)
Q Consensus 228 vVpGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~ 302 (334)
+|||||++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+||.+ +.+|++. +++++|||+.+|+|
T Consensus 468 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~ 547 (590)
T 3p9d_C 468 LSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKI 547 (590)
T ss_dssp EECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSC
T ss_pred EEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeE
Confidence 9999999999999999998655 88999999999999999999999999999999 9999874 56789999999999
Q ss_pred eccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 303 VDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 303 ~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+||++.|||||++||+++|++|+|+|++||||
T Consensus 548 ~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 579 (590)
T 3p9d_C 548 VDMVSYGIWEPEVIKQQSVKTAIESACLLLRV 579 (590)
T ss_dssp BCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSE
T ss_pred eehHHcCCeEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999986
No 6
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=2e-61 Score=488.10 Aligned_cols=279 Identities=18% Similarity=0.249 Sum_probs=257.6
Q ss_pred CCChhHhHHHHHHHhh---------------------------cceee--ee--eEEeecCeEEEeecc-----------
Q 019867 9 NGDGEIGELIAKVFEK---------------------------GWEND--LI--TIFVLDGALVLIYDT----------- 46 (334)
Q Consensus 9 n~d~~~g~lia~a~~~---------------------------G~~~~--~~--~~~~l~~p~Ill~d~----------- 46 (334)
++++.+|+|+++|+.+ ||.|| +. |+.+++|||||++|+
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~k~e~~~ 240 (513)
T 3iyg_B 161 HHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFG 240 (513)
T ss_pred cchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCcccccccccC
Confidence 4678999999999986 77887 54 899999999999999
Q ss_pred ---CCCChHHHHH-----------HhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHH
Q 019867 47 ---KISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMED 112 (334)
Q Consensus 47 ---~i~~~~~i~~-----------~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Led 112 (334)
+|++++++.+ +++++.++|+||||++++|+++|+++|.. .+|+|||.|+ +.+|+|
T Consensus 241 ~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~------~~I~av~~~~-----~~~le~ 309 (513)
T 3iyg_B 241 SRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGA------AGVMAIEHAD-----FVGVER 309 (513)
T ss_pred CceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHH------cCceEEecCC-----HHHHHH
Confidence 5788888766 68899999999999999999999999986 4789999987 467999
Q ss_pred HHhHcCcEEeeCCCCCcccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhh
Q 019867 113 LAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKL 189 (334)
Q Consensus 113 ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~l 189 (334)
||++|||+++++ ++++++++||+|++|+ +++++++++.+|++
T Consensus 310 ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------------------ 354 (513)
T 3iyg_B 310 LALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL------------------------------ 354 (513)
T ss_pred HHHHhCCEEecc-----cccCCHhHCCcccEEEEEEECCeEEEEEecCCC------------------------------
Confidence 999999999998 9999999999999998 67788899988752
Q ss_pred cCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhc-CccccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHH
Q 019867 190 SGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMA 267 (334)
Q Consensus 190 sg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~-gvVpGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p 267 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++ |+|||||++|++++..|++++.. ++++|+|+++|++||+.|
T Consensus 355 -~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~i 433 (513)
T 3iyg_B 355 -GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRML 433 (513)
T ss_pred -CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999975 99999999999999999999876 899999999999999999
Q ss_pred HHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 268 AYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 268 ~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
|++||+|||+|+.+ +.+|++. ++.++|||+.+|+|.||++.|||||++||+++|++|+|+|++||||
T Consensus 434 p~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 504 (513)
T 3iyg_B 434 PTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRV 504 (513)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 9999874 5678999999999999999999999999999999999999999986
No 7
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=9.5e-62 Score=494.51 Aligned_cols=291 Identities=18% Similarity=0.281 Sum_probs=263.2
Q ss_pred cEEEeecCC------ChhHhHHHHHHHhh----------------------------------cceee--ee---eEEee
Q 019867 2 KVGTTAANG------DGEIGELIAKVFEK----------------------------------GWEND--LI---TIFVL 36 (334)
Q Consensus 2 ~va~isan~------d~~~g~lia~a~~~----------------------------------G~~~~--~~---~~~~l 36 (334)
+||++|.|+ |+.+|+|+++|+.+ ||.|| +. |+.++
T Consensus 158 ~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~i 237 (559)
T 3p9d_A 158 NIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRI 237 (559)
T ss_dssp HHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEE
T ss_pred HHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceee
Confidence 577788776 89999999999874 55555 33 88999
Q ss_pred c--CeEEEeeccCC-------------CChHH-----------HHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCC
Q 019867 37 D--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 90 (334)
Q Consensus 37 ~--~p~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g 90 (334)
+ ||||+++|++| +++++ +.|+++++.++|+||||++++|+++||++|+.|+
T Consensus 238 e~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~--- 314 (559)
T 3p9d_A 238 AGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK--- 314 (559)
T ss_dssp CSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT---
T ss_pred ccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC---
Confidence 9 99999999986 45555 7888999999999999999999999999999986
Q ss_pred cceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcc-cCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHH
Q 019867 91 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQER 166 (334)
Q Consensus 91 ~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l-~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~r 166 (334)
+++|+ +.++++|+|||++|||+++++..++.+ +++++++||+|++|+ +++++++++.+|++
T Consensus 315 ---I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------- 379 (559)
T 3p9d_A 315 ---IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK------- 379 (559)
T ss_dssp ---CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS-------
T ss_pred ---CceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC-------
Confidence 35555 677999999999999999999777765 899999999999998 67899999998763
Q ss_pred HHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHH
Q 019867 167 CEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDK 245 (334)
Q Consensus 167 i~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~ 245 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++
T Consensus 380 ------------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 435 (559)
T 3p9d_A 380 ------------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDN 435 (559)
T ss_dssp ------------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHH
T ss_pred ------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999987 999999999999999999
Q ss_pred HcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCC------------CeeEecCCCceeccccC
Q 019867 246 LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSS------------DLGYNPARGNYVDMFKC 308 (334)
Q Consensus 246 ~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~------------~~G~d~~~g~~~dm~~~ 308 (334)
++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++. ++|||+.+|+|+||++.
T Consensus 436 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~ 515 (559)
T 3p9d_A 436 FATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHA 515 (559)
T ss_dssp HHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTS
T ss_pred HhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhc
Confidence 9876 89999999999999999999999999999999 9999864 333 79999999999999999
Q ss_pred CcccccccHHHHHHHHHHHHHHHhcC
Q 019867 309 GDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 309 GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
|||||++||+++|++|+|+|++||||
T Consensus 516 gI~dp~~vk~~al~~A~e~a~~iL~i 541 (559)
T 3p9d_A 516 GVLEPTISKVKSLKSALEACVAILRI 541 (559)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999986
No 8
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.5e-61 Score=485.94 Aligned_cols=282 Identities=18% Similarity=0.261 Sum_probs=254.8
Q ss_pred eecCCChhHhHHHHHHHhh----------------------------------cceee--ee---eEEeecCeEEEeecc
Q 019867 6 TAANGDGEIGELIAKVFEK----------------------------------GWEND--LI---TIFVLDGALVLIYDT 46 (334)
Q Consensus 6 isan~d~~~g~lia~a~~~----------------------------------G~~~~--~~---~~~~l~~p~Ill~d~ 46 (334)
+++++|+.+|+|+++|+.+ ||.|| +. |+.+++|||||++|+
T Consensus 116 i~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~ 195 (500)
T 3aq1_B 116 GAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSC 195 (500)
T ss_dssp STTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESS
T ss_pred cccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeC
Confidence 5688899999999999975 55555 33 899999999999999
Q ss_pred C-------------CCChHHH-----------HHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCc
Q 019867 47 K-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGL 102 (334)
Q Consensus 47 ~-------------i~~~~~i-----------~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~ 102 (334)
+ |++++++ .++++++.++|+||||++++|+++||++|+.|+ |+||+
T Consensus 196 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~---- 265 (500)
T 3aq1_B 196 PVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR---- 265 (500)
T ss_dssp CBCC-------------------------CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC----
T ss_pred CccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE----
Confidence 8 8888886 899999999999999999999999999999874 67775
Q ss_pred ccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccc
Q 019867 103 AEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTS 179 (334)
Q Consensus 103 g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~ 179 (334)
+.++++|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|++
T Consensus 266 -~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-------------------- 319 (500)
T 3aq1_B 266 -RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQN-------------------- 319 (500)
T ss_dssp -SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEEECSSSEEEEEEEETT--------------------
T ss_pred -eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEEEecCeEEEEEECCCC--------------------
Confidence 778999999999999999998 999999999999999976 789999999763
Q ss_pred hhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHHHHH
Q 019867 180 DKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGV 257 (334)
Q Consensus 180 ~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~~g~ 257 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++++|+|+
T Consensus 320 -----------~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i 388 (500)
T 3aq1_B 320 -----------SKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAV 388 (500)
T ss_dssp -----------CCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHH
T ss_pred -----------CceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHH
Confidence 4689999999999999999999999999999999988 9999999999999999999865 88999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhc
Q 019867 258 QIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNA 333 (334)
Q Consensus 258 ~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~ 333 (334)
++|++||+.||++||+|||+|+.+ +.+|++. +..++|||+.+|+++||++.|||||++||+++|++|+++|++|||
T Consensus 389 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 468 (500)
T 3aq1_B 389 SKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILR 468 (500)
T ss_dssp HHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999864 446899999999999999999999999999999999999999999
Q ss_pred C
Q 019867 334 I 334 (334)
Q Consensus 334 i 334 (334)
|
T Consensus 469 i 469 (500)
T 3aq1_B 469 I 469 (500)
T ss_dssp C
T ss_pred H
Confidence 7
No 9
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=3.2e-61 Score=489.38 Aligned_cols=286 Identities=20% Similarity=0.284 Sum_probs=259.0
Q ss_pred cEEEeecCC------ChhHhHHHHHHHhh------------------------------cceee--ee---eEEeecCeE
Q 019867 2 KVGTTAANG------DGEIGELIAKVFEK------------------------------GWEND--LI---TIFVLDGAL 40 (334)
Q Consensus 2 ~va~isan~------d~~~g~lia~a~~~------------------------------G~~~~--~~---~~~~l~~p~ 40 (334)
+||++|.|+ |+.+|+|+++|+.+ ||.|| ++ |+.+++|||
T Consensus 152 ~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~k 231 (543)
T 3ruv_A 152 KIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAK 231 (543)
T ss_dssp HHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEE
T ss_pred HHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcE
Confidence 466777653 88999999999886 56665 43 899999999
Q ss_pred EEeecc-------------CCCChHH-----------HHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEE
Q 019867 41 VLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCI 96 (334)
Q Consensus 41 Ill~d~-------------~i~~~~~-----------i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~a 96 (334)
||++|+ +|+++++ +.++++++.++|+||||++++|+++|+++|..+ ++++
T Consensus 232 Ill~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~ 305 (543)
T 3ruv_A 232 IALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVA 305 (543)
T ss_dssp EEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEE
T ss_pred EEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEE
Confidence 999999 4788877 566778999999999999999999999999853 3566
Q ss_pred EeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHH
Q 019867 97 IKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRST 173 (334)
Q Consensus 97 Vk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~ 173 (334)
|+ +.++++|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|+++
T Consensus 306 v~-----~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------- 362 (543)
T 3ruv_A 306 AR-----RVKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------- 362 (543)
T ss_dssp EC-----SCCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC-------------
T ss_pred Ee-----eCCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCCceEEEEECCCCC-------------
Confidence 66 456899999999999999998 999999999999999876 7889999998753
Q ss_pred hhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-Ch
Q 019867 174 IKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NS 251 (334)
Q Consensus 174 ~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~ 251 (334)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++
T Consensus 363 ------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 424 (543)
T 3ruv_A 363 ------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISG 424 (543)
T ss_dssp ------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCT
T ss_pred ------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCCh
Confidence 379999999999999999999999999999999988 9999999999999999999866 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc----CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHH
Q 019867 252 DQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ----DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATS 326 (334)
Q Consensus 252 ~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~----~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~ 326 (334)
++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+|.||++.|||||++||+++|++|++
T Consensus 425 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 504 (543)
T 3ruv_A 425 REQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAE 504 (543)
T ss_dssp THHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 9999863 35789999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 019867 327 MISLKNAI 334 (334)
Q Consensus 327 ~a~~iL~i 334 (334)
+|++||||
T Consensus 505 ~a~~iL~i 512 (543)
T 3ruv_A 505 STEMLLRI 512 (543)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhH
Confidence 99999997
No 10
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-60 Score=481.61 Aligned_cols=287 Identities=17% Similarity=0.213 Sum_probs=260.4
Q ss_pred cEEEeecCCC------hhHhHHHHHHHhh--------------------------------cceee--ee--eEEeecCe
Q 019867 2 KVGTTAANGD------GEIGELIAKVFEK--------------------------------GWEND--LI--TIFVLDGA 39 (334)
Q Consensus 2 ~va~isan~d------~~~g~lia~a~~~--------------------------------G~~~~--~~--~~~~l~~p 39 (334)
+||++|.|++ +.+|+|+++|+.+ ||.|| +. ||..++||
T Consensus 144 ~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~ 223 (518)
T 3iyg_D 144 NSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKA 223 (518)
T ss_pred HHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCc
Confidence 6899999875 7899999999875 66666 44 68999999
Q ss_pred EEEeeccCC-------------CChH-----------HHHHHhhHHHHhCCcEEEE-----eccccccchhhhhhcccCC
Q 019867 40 LVLIYDTKI-------------SNSN-----------VIRQASLPCMMQGQSLLVV-----AEDVENEVLGDIATDFTCT 90 (334)
Q Consensus 40 ~Ill~d~~i-------------~~~~-----------~i~~~le~i~~~~~~llIi-----a~~i~~~aL~~L~~n~~~g 90 (334)
+|+++++++ ++++ ++.|+++++.++|+||||+ +++|+++||++|+.|
T Consensus 224 kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~---- 299 (518)
T 3iyg_D 224 KIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM---- 299 (518)
T ss_pred eEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc----
Confidence 999999964 4554 4788899999999999999 899999999999976
Q ss_pred cceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---c-ceEEEEcCCCChhhHHHH
Q 019867 91 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M-DNVVIIGGSGELVDIQER 166 (334)
Q Consensus 91 ~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~-~~~~~i~~~~~~~~i~~r 166 (334)
+|+||+.|+ +.+|+|||++|||+++++ ++++++++||+|++|++. + ++++++.+|..
T Consensus 300 --~I~av~~~~-----~~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~------- 360 (518)
T 3iyg_D 300 --KIMVVKDIE-----REDIEFICKTIGTKPVAH-----VDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS------- 360 (518)
T ss_pred --CcEEEecCC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC-------
Confidence 589999987 567999999999999999 999999999999999864 3 46788998742
Q ss_pred HHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHH
Q 019867 167 CEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDK 245 (334)
Q Consensus 167 i~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~ 245 (334)
++++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++
T Consensus 361 -----------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~ 417 (518)
T 3iyg_D 361 -----------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTE 417 (518)
T ss_pred -----------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999887 999999999999999999
Q ss_pred HcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHH
Q 019867 246 LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSE 320 (334)
Q Consensus 246 ~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~a 320 (334)
++.. ++++|+|+++|++||+.||++||+|||+||.+ +.+|++. ++.++|||+.+|+|.||++.|||||++||+++
T Consensus 418 ~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~a 497 (518)
T 3iyg_D 418 YSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSA 497 (518)
T ss_pred HhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHH
Confidence 9776 89999999999999999999999999999999 9999873 56689999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC
Q 019867 321 FAKATSMISLKNAI 334 (334)
Q Consensus 321 l~~A~~~a~~iL~i 334 (334)
|++|+|+|++||||
T Consensus 498 l~~A~e~a~~iL~i 511 (518)
T 3iyg_D 498 LTLATETVRSILKI 511 (518)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999997
No 11
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-60 Score=482.37 Aligned_cols=280 Identities=14% Similarity=0.164 Sum_probs=253.9
Q ss_pred cCCChhHhHHHHHHHhh---------------------------cceee-------ee-eEEeecCeEEEeecc------
Q 019867 8 ANGDGEIGELIAKVFEK---------------------------GWEND-------LI-TIFVLDGALVLIYDT------ 46 (334)
Q Consensus 8 an~d~~~g~lia~a~~~---------------------------G~~~~-------~~-~~~~l~~p~Ill~d~------ 46 (334)
+++|+.+|+|+++|+.+ ||.|| |+ ||.+++|||||++|+
T Consensus 160 s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k 239 (515)
T 3iyg_H 160 SQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKA 239 (515)
T ss_pred cccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccc
Confidence 34688999999999986 88888 43 688999999999999
Q ss_pred -------CCCChHHH-----------HHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcccchhh
Q 019867 47 -------KISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKA 108 (334)
Q Consensus 47 -------~i~~~~~i-----------~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~ 108 (334)
+|++++++ .++++++.++|+||||++++|++.++++|..+ | +.+ +++.+++
T Consensus 240 ~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---g---I~~-----v~~~~k~ 308 (515)
T 3iyg_H 240 EKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---D---MFC-----AGRVPEE 308 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---C---Ccc-----cccccHH
Confidence 58888887 56689999999999999999999999998643 2 333 3477899
Q ss_pred HHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccchhHHHH
Q 019867 109 IMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDR 185 (334)
Q Consensus 109 ~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR 185 (334)
+|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|+++
T Consensus 309 ~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------------- 358 (515)
T 3iyg_H 309 DLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA------------------------- 358 (515)
T ss_pred HHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-------------------------
Confidence 9999999999999999 999999999999999865 6889999998642
Q ss_pred HhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhc-CccccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHH
Q 019867 186 LAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNA 263 (334)
Q Consensus 186 ~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~-gvVpGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~A 263 (334)
+.|||++||+|+.+++|+||+++||||++|+++++ |+|||||++|++++..|++++.. ++++|+|+++|++|
T Consensus 359 ------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 432 (515)
T 3iyg_H 359 ------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKA 432 (515)
T ss_pred ------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 47999999999999999999999999999999975 89999999999999999998766 89999999999999
Q ss_pred HHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 264 LKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 264 L~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
|+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+|+||++.|||||++||+++|++|+|+|++||||
T Consensus 433 Le~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 433 LEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 9999874 4567999999999999999999999999999999999999999986
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=7.7e-61 Score=487.02 Aligned_cols=282 Identities=18% Similarity=0.298 Sum_probs=261.3
Q ss_pred eecCCChhHhHHHHHHHhh---------------------------------cceee--ee---eEEeecCeEEEeeccC
Q 019867 6 TAANGDGEIGELIAKVFEK---------------------------------GWEND--LI---TIFVLDGALVLIYDTK 47 (334)
Q Consensus 6 isan~d~~~g~lia~a~~~---------------------------------G~~~~--~~---~~~~l~~p~Ill~d~~ 47 (334)
+++++|+.+|+|+++|+.+ ||.|| |. |+.+++|||||++|++
T Consensus 166 i~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 245 (548)
T 1q3q_A 166 NAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALINEA 245 (548)
T ss_dssp TTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEECSC
T ss_pred ccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEecC
Confidence 6688899999999999976 55565 44 7999999999999998
Q ss_pred -------------CCChHHH-----------HHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcc
Q 019867 48 -------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLA 103 (334)
Q Consensus 48 -------------i~~~~~i-----------~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g 103 (334)
|++++++ .++++++.++|+||||++++|+++||++|+.|+ |+||+
T Consensus 246 Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~----- 314 (548)
T 1q3q_A 246 LEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR----- 314 (548)
T ss_dssp BSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----
T ss_pred cCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc-----
Confidence 8889886 889999999999999999999999999999874 67775
Q ss_pred cchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccch
Q 019867 104 EDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD 180 (334)
Q Consensus 104 ~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~ 180 (334)
+.++++|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|++
T Consensus 315 ~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~--------------------- 368 (548)
T 1q3q_A 315 RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN--------------------- 368 (548)
T ss_dssp SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEEETTEEEEEEECCSS---------------------
T ss_pred cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCC---------------------
Confidence 778999999999999999998 999999999999999875 889999999863
Q ss_pred hHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHHHHHH
Q 019867 181 KLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQ 258 (334)
Q Consensus 181 ~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~~g~~ 258 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++++|+|++
T Consensus 369 ----------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~ 438 (548)
T 1q3q_A 369 ----------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIE 438 (548)
T ss_dssp ----------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred ----------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHH
Confidence 4589999999999999999999999999999999998 9999999999999999999865 889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 259 IVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 259 ~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++.||++.|||||++||+++|++|+++|++||||
T Consensus 439 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 518 (548)
T 1q3q_A 439 NFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRI 518 (548)
T ss_dssp HHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999864 4468999999999999999999999999999999999999999997
No 13
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.7e-61 Score=488.62 Aligned_cols=286 Identities=21% Similarity=0.308 Sum_probs=259.3
Q ss_pred cEEEeecCC------ChhHhHHHHHHHhh---------------------------------cceee--ee---eEEeec
Q 019867 2 KVGTTAANG------DGEIGELIAKVFEK---------------------------------GWEND--LI---TIFVLD 37 (334)
Q Consensus 2 ~va~isan~------d~~~g~lia~a~~~---------------------------------G~~~~--~~---~~~~l~ 37 (334)
+||++|.|+ |+.+|+|+++|+.+ ||.|| +. |+.+++
T Consensus 163 ~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ie 242 (553)
T 3ko1_A 163 KIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLE 242 (553)
T ss_dssp HHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCB
T ss_pred HHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccc
Confidence 567777765 88999999999876 55555 43 899999
Q ss_pred CeEEEeecc-------------CCCChHH-----------HHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcce
Q 019867 38 GALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEK 93 (334)
Q Consensus 38 ~p~Ill~d~-------------~i~~~~~-----------i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~ 93 (334)
|||||++|+ +|+++++ +.++++++.++|+||||++++|+++|+++|..+ +
T Consensus 243 n~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------g 316 (553)
T 3ko1_A 243 NAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------G 316 (553)
T ss_dssp SCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------T
T ss_pred cceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------c
Confidence 999999999 5788887 566778999999999999999999999999854 3
Q ss_pred EEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHH
Q 019867 94 VCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQL 170 (334)
Q Consensus 94 v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l 170 (334)
+++|+ +.++++|+|||++|||+++++ ++++++++||+|++|++. +++++|+.+|+++
T Consensus 317 I~~v~-----~v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~---------- 376 (553)
T 3ko1_A 317 VLAVR-----RAKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP---------- 376 (553)
T ss_dssp CEEEC-----CCCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS----------
T ss_pred hhhhh-----hhhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhhcCcceEEEeccCCCC----------
Confidence 56666 456899999999999999998 999999999999999975 8889999998753
Q ss_pred HHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC
Q 019867 171 RSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT 249 (334)
Q Consensus 171 ~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~ 249 (334)
..+||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++..
T Consensus 377 ---------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~ 435 (553)
T 3ko1_A 377 ---------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQ 435 (553)
T ss_dssp ---------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHH
T ss_pred ---------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccc
Confidence 379999999999999999999999999999999988 9999999999999999998866
Q ss_pred -ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CC-CCeeEecCCCceeccccCCcccccccHHHHHHH
Q 019867 250 -NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DS-SDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAK 323 (334)
Q Consensus 250 -~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~-~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~ 323 (334)
++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++ .++|||+.+|+|.||++.|||||++||+++|++
T Consensus 436 ~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 515 (553)
T 3ko1_A 436 VGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKA 515 (553)
T ss_dssp HCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHH
T ss_pred cCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhh
Confidence 89999999999999999999999999999999 9999875 23 679999999999999999999999999999999
Q ss_pred HHHHHHHHhcC
Q 019867 324 ATSMISLKNAI 334 (334)
Q Consensus 324 A~~~a~~iL~i 334 (334)
|+++|++||||
T Consensus 516 A~e~a~~iL~i 526 (553)
T 3ko1_A 516 ATEAATLVLRI 526 (553)
T ss_dssp HHHHHHHHHHE
T ss_pred cchhheEEEeh
Confidence 99999999986
No 14
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=6.1e-61 Score=487.45 Aligned_cols=282 Identities=21% Similarity=0.286 Sum_probs=261.1
Q ss_pred eecCCChhHhHHHHHHHhh---------------------------------cceee--ee---eEEeecCeEEEeeccC
Q 019867 6 TAANGDGEIGELIAKVFEK---------------------------------GWEND--LI---TIFVLDGALVLIYDTK 47 (334)
Q Consensus 6 isan~d~~~g~lia~a~~~---------------------------------G~~~~--~~---~~~~l~~p~Ill~d~~ 47 (334)
+++++|+.+|+|+++|+.+ ||.|| |. |+.+++|||||++|++
T Consensus 163 i~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 242 (545)
T 1a6d_A 163 NTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSA 242 (545)
T ss_dssp SCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEECSC
T ss_pred cccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEecC
Confidence 6788899999999999976 55665 44 7999999999999998
Q ss_pred -------------CCChHHH-----------HHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcc
Q 019867 48 -------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLA 103 (334)
Q Consensus 48 -------------i~~~~~i-----------~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g 103 (334)
|++++++ .++++++.++|+||||++++|+++||++|+.|+ |+||+
T Consensus 243 Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~----- 311 (545)
T 1a6d_A 243 LEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR----- 311 (545)
T ss_dssp BSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-----
T ss_pred CCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-----
Confidence 8888886 889999999999999999999999999999874 67776
Q ss_pred cchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccch
Q 019867 104 EDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD 180 (334)
Q Consensus 104 ~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~ 180 (334)
+.++++|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|++
T Consensus 312 ~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~--------------------- 365 (545)
T 1a6d_A 312 RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN--------------------- 365 (545)
T ss_dssp SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC---------------------
T ss_pred cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCC---------------------
Confidence 678999999999999999998 999999999999999875 688999999763
Q ss_pred hHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHHHHHH
Q 019867 181 KLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQ 258 (334)
Q Consensus 181 ~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~~g~~ 258 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++++|+|++
T Consensus 366 ----------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~ 435 (545)
T 1a6d_A 366 ----------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIE 435 (545)
T ss_dssp ----------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred ----------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHH
Confidence 4589999999999999999999999999999999988 9999999999999999999865 899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 259 IVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 259 ~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|++.||++.|||||++||+++|++|+++|++||||
T Consensus 436 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 515 (545)
T 1a6d_A 436 AFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRI 515 (545)
T ss_dssp HHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999864 4568999999999999999999999999999999999999999997
No 15
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.5e-60 Score=484.60 Aligned_cols=282 Identities=21% Similarity=0.286 Sum_probs=260.1
Q ss_pred eecCCChhHhHHHHHHHhh---------------------------------cceee--ee---eEEeecCeEEEeeccC
Q 019867 6 TAANGDGEIGELIAKVFEK---------------------------------GWEND--LI---TIFVLDGALVLIYDTK 47 (334)
Q Consensus 6 isan~d~~~g~lia~a~~~---------------------------------G~~~~--~~---~~~~l~~p~Ill~d~~ 47 (334)
+++++|+.+|+|+++|+.+ ||.|| +. |+.+++|||||++|++
T Consensus 164 i~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~ 243 (543)
T 1a6d_B 164 SASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAP 243 (543)
T ss_dssp GGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSC
T ss_pred cccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEecc
Confidence 6788899999999999976 45555 33 7899999999999998
Q ss_pred -------------CCChHHH-----------HHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEeccCcc
Q 019867 48 -------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLA 103 (334)
Q Consensus 48 -------------i~~~~~i-----------~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g 103 (334)
|++++++ .++++++.++|+||||++++|+++||++|+.|+ |+||+
T Consensus 244 Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~----- 312 (543)
T 1a6d_B 244 LEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR----- 312 (543)
T ss_dssp BSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----
T ss_pred cccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec-----
Confidence 8888886 889999999999999999999999999999874 67776
Q ss_pred cchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhhccch
Q 019867 104 EDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSD 180 (334)
Q Consensus 104 ~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~ 180 (334)
+.++++|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|++
T Consensus 313 ~v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~--------------------- 366 (543)
T 1a6d_B 313 RVKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN--------------------- 366 (543)
T ss_dssp SCCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS---------------------
T ss_pred cCCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEEecCceEEEEecCCC---------------------
Confidence 678999999999999999998 999999999999999875 888999999763
Q ss_pred hHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHHHHHH
Q 019867 181 KLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQ 258 (334)
Q Consensus 181 ~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~~g~~ 258 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++++|+|++
T Consensus 367 ----------~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~ 436 (543)
T 1a6d_B 367 ----------PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIE 436 (543)
T ss_dssp ----------SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHH
T ss_pred ----------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHH
Confidence 4589999999999999999999999999999999988 9999999999999999999765 889999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 259 IVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 259 ~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+++||++.|||||++||+++|++|+++|++||||
T Consensus 437 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 516 (543)
T 1a6d_B 437 KFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRI 516 (543)
T ss_dssp HHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999864 4568999999999999999999999999999999999999999986
No 16
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.3e-60 Score=476.65 Aligned_cols=287 Identities=16% Similarity=0.205 Sum_probs=259.5
Q ss_pred cEEEeecCC-----ChhHhHHHHHHHhh------------------------------cceee--ee-eEEeecCeEEEe
Q 019867 2 KVGTTAANG-----DGEIGELIAKVFEK------------------------------GWEND--LI-TIFVLDGALVLI 43 (334)
Q Consensus 2 ~va~isan~-----d~~~g~lia~a~~~------------------------------G~~~~--~~-~~~~l~~p~Ill 43 (334)
+||++|.|+ |+.+|+||++|+.+ ||.|| +. |+..++||+|++
T Consensus 146 ~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~~~~~~~n~kI~l 225 (512)
T 3iyg_Q 146 SLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEGDVTSVKDAKIAV 225 (512)
T ss_pred HHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccceEEeeEEEecCcCCCCcccccCceEE
Confidence 578888876 88999999999976 67777 44 788889999999
Q ss_pred eccC-------------CCChHHHHHH-------hh----HHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEec
Q 019867 44 YDTK-------------ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKA 99 (334)
Q Consensus 44 ~d~~-------------i~~~~~i~~~-------le----~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~ 99 (334)
++++ |++++++.|+ |+ ++.++|+||||++++|++.++++|.. .+|+|||.
T Consensus 226 l~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k------~~I~av~~ 299 (512)
T 3iyg_Q 226 YSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANK------YNIMLVRL 299 (512)
T ss_pred EecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHH------CCeEEEEe
Confidence 8873 6778898887 66 88899999999999999999999874 57999998
Q ss_pred cCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHHHHHHHHHhhh
Q 019867 100 AGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQERCEQLRSTIKL 176 (334)
Q Consensus 100 p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~ri~~l~~~~~~ 176 (334)
|+ +.+|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|.
T Consensus 300 ~~-----~~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~------------------ 351 (512)
T 3iyg_Q 300 NS-----KWDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEK------------------ 351 (512)
T ss_pred CC-----HHHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEEEccc------------------
Confidence 87 567999999999999998 999999999999999875 34678888762
Q ss_pred ccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHH
Q 019867 177 STSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQK 254 (334)
Q Consensus 177 ~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~ 254 (334)
++|++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++++|
T Consensus 352 ------------~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 419 (512)
T 3iyg_Q 352 ------------EDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQ 419 (512)
T ss_pred ------------CCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHH
Confidence 357899999999999999999999999999999999988 9999999999999999999876 88999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCC--ceeccccCCcccccccHHHHHHHHHHHH
Q 019867 255 IGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARG--NYVDMFKCGDVDPLKHVPSEFAKATSMI 328 (334)
Q Consensus 255 ~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g--~~~dm~~~GIiDp~~v~~~al~~A~~~a 328 (334)
+|+++|++||+.||++||+|||+||.+ +.+|++. +++++|||+.+| +|+||++.|||||++||+++|++|+|+|
T Consensus 420 ~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a 499 (512)
T 3iyg_Q 420 YAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAA 499 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999864 567899999965 9999999999999999999999999999
Q ss_pred HHHhcC
Q 019867 329 SLKNAI 334 (334)
Q Consensus 329 ~~iL~i 334 (334)
++||||
T Consensus 500 ~~iL~i 505 (512)
T 3iyg_Q 500 VTVLRV 505 (512)
T ss_pred HHHHhH
Confidence 999986
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-59 Score=474.87 Aligned_cols=263 Identities=17% Similarity=0.190 Sum_probs=240.0
Q ss_pred cceee--ee---eEEeecCeEEEeeccC-------------CCChHHH-----------HHHhhHHHHhCCcEEEEeccc
Q 019867 25 GWEND--LI---TIFVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 75 (334)
Q Consensus 25 G~~~~--~~---~~~~l~~p~Ill~d~~-------------i~~~~~i-----------~~~le~i~~~~~~llIia~~i 75 (334)
||.|| +. |+..++||+|++++++ |++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 67777 44 8888999999998873 6777776 678999999999999999999
Q ss_pred cccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEE-----ecce
Q 019867 76 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 150 (334)
Q Consensus 76 ~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v-----~~~~ 150 (334)
+++|+++|+.|++ .+|+.+ ++++|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~I------~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQNDL------PAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 9999999999865 355544 3889999999999999998 99999999999999987 5688
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-cc
Q 019867 151 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 229 (334)
Q Consensus 151 ~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vV 229 (334)
++++.+|+++ +.+||+|||+|+.+++|+||+++||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNS-------------------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCC-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 9999998743 378999999999999999999999999999999988 99
Q ss_pred ccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc----CCCCeeEecCCCcee
Q 019867 230 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ----DSSDLGYNPARGNYV 303 (334)
Q Consensus 230 pGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~----~~~~~G~d~~~g~~~ 303 (334)
||||++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+|+
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999876 89999999999999999999999999999999 9999863 456899999999999
Q ss_pred ccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 304 DMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 304 dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
||++.|||||++||+++|++|+|+|++||||
T Consensus 478 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 508 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQQISLATQMVRMILKI 508 (515)
T ss_pred chHhccCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986
No 18
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-59 Score=477.13 Aligned_cols=291 Identities=16% Similarity=0.191 Sum_probs=257.4
Q ss_pred cEEEeec------CCChhHhHHHHHHHhh----------------------------------cceee--ee---eEEee
Q 019867 2 KVGTTAA------NGDGEIGELIAKVFEK----------------------------------GWEND--LI---TIFVL 36 (334)
Q Consensus 2 ~va~isa------n~d~~~g~lia~a~~~----------------------------------G~~~~--~~---~~~~l 36 (334)
+||++|. ++|+.+|+|+++|+.+ ||.|| +. |+.++
T Consensus 144 ~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~i 223 (529)
T 3iyg_A 144 NAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRI 223 (529)
T ss_pred HHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCccc
Confidence 4565553 5689999999999864 55665 44 88999
Q ss_pred cCeEEEeeccCC-------------CChHH-----------HHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcc
Q 019867 37 DGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 92 (334)
Q Consensus 37 ~~p~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~ 92 (334)
+||+|+++|+++ +++++ +.++++++.++|+||||++++|+++|+++|+.|+
T Consensus 224 en~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g----- 298 (529)
T 3iyg_A 224 VNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG----- 298 (529)
T ss_pred CCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC-----
Confidence 999999999954 34433 6677889999999999999999999999999874
Q ss_pred eEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCc-ccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHH
Q 019867 93 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCE 168 (334)
Q Consensus 93 ~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~-l~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~ 168 (334)
|++|+ +.++++|+|||++|||+++++..+++ .+++++++||+|+.|+ +++++++++.+|+++
T Consensus 299 -I~av~-----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~-------- 364 (529)
T 3iyg_A 299 -AMAVR-----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR-------- 364 (529)
T ss_pred -Cceec-----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC--------
Confidence 67777 56789999999999999999955554 3556788999999998 788999999998642
Q ss_pred HHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHc
Q 019867 169 QLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQ 247 (334)
Q Consensus 169 ~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~ 247 (334)
++|||+|||+|+.+++|.||+++||||++|+++++| +|||||++|++++..|++++
T Consensus 365 -----------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~ 421 (529)
T 3iyg_A 365 -----------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYA 421 (529)
T ss_pred -----------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHh
Confidence 489999999999999999999999999999999887 99999999999999999998
Q ss_pred CC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CC--------CCeeEecCCCceeccccCCccccc
Q 019867 248 TT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DS--------SDLGYNPARGNYVDMFKCGDVDPL 314 (334)
Q Consensus 248 ~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~--------~~~G~d~~~g~~~dm~~~GIiDp~ 314 (334)
.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. +. .++|||+.+|++.||++.|||||+
T Consensus 422 ~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~ 501 (529)
T 3iyg_A 422 TSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPT 501 (529)
T ss_pred hhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecH
Confidence 76 89999999999999999999999999999999 9999864 22 579999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHhcC
Q 019867 315 KHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 315 ~v~~~al~~A~~~a~~iL~i 334 (334)
.||+++|++|+++|++||||
T Consensus 502 ~vk~~al~~A~e~a~~iL~i 521 (529)
T 3iyg_A 502 IVKVKSLKFATEAAITILRI 521 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999996
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2e-60 Score=482.07 Aligned_cols=289 Identities=16% Similarity=0.158 Sum_probs=259.5
Q ss_pred cEEEeecCC------ChhHhHHHHHHHhh-------------------------------cceee--ee----eEEeecC
Q 019867 2 KVGTTAANG------DGEIGELIAKVFEK-------------------------------GWEND--LI----TIFVLDG 38 (334)
Q Consensus 2 ~va~isan~------d~~~g~lia~a~~~-------------------------------G~~~~--~~----~~~~l~~ 38 (334)
+||++|.|+ ++.+|+|+++|+.+ ||.|| +. |+.+++|
T Consensus 152 ~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien 231 (528)
T 3p9d_D 152 RAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEK 231 (528)
T ss_dssp HHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESS
T ss_pred HHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccC
Confidence 577778765 78899999999875 77887 43 8999999
Q ss_pred eEEEeeccCCC-------------ChHH-----------HHHHhhHHHHhCCcEEEEeccc-----cccchhhhhhcccC
Q 019867 39 ALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQSLLVVAEDV-----ENEVLGDIATDFTC 89 (334)
Q Consensus 39 p~Ill~d~~i~-------------~~~~-----------i~~~le~i~~~~~~llIia~~i-----~~~aL~~L~~n~~~ 89 (334)
|+||++|++++ ++++ +.++++++.++|+||||++++| +++++++|..|+
T Consensus 232 ~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~-- 309 (528)
T 3p9d_D 232 AKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN-- 309 (528)
T ss_dssp EEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS--
T ss_pred ceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC--
Confidence 99999999875 5544 7889999999999999999999 999999999764
Q ss_pred CcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEe---cceEEEEcCCCChhhHHHH
Q 019867 90 TTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---MDNVVIIGGSGELVDIQER 166 (334)
Q Consensus 90 g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~---~~~~~~i~~~~~~~~i~~r 166 (334)
|++|+ +.++++|+|||++|||+++++ ++++++++||+|++|++. +++++++.+|.+.
T Consensus 310 ----I~av~-----~~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------ 369 (528)
T 3p9d_D 310 ----IMVVK-----DIEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNN------ 369 (528)
T ss_dssp ----CCEEE-----CCCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEECCEETTEECCBCTTBCCG------
T ss_pred ----cEEEE-----eCCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEEEEEECCEEEEEEEccccc------
Confidence 67777 456889999999999999999 899999999999999854 5567777776420
Q ss_pred HHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHH
Q 019867 167 CEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDK 245 (334)
Q Consensus 167 i~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~ 245 (334)
-.+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++
T Consensus 370 ----------------------~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~ 427 (528)
T 3p9d_D 370 ----------------------NARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSK 427 (528)
T ss_dssp ----------------------GGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHH
T ss_pred ----------------------CCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHH
Confidence 026799999999999999999999999999999999887 999999999999999999
Q ss_pred HcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHH
Q 019867 246 LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSE 320 (334)
Q Consensus 246 ~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~a 320 (334)
++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+|+||++.|||||++||+++
T Consensus 428 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~a 507 (528)
T 3p9d_D 428 EARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSA 507 (528)
T ss_dssp CCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHH
T ss_pred HhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHH
Confidence 8776 89999999999999999999999999999999 9999874 45789999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC
Q 019867 321 FAKATSMISLKNAI 334 (334)
Q Consensus 321 l~~A~~~a~~iL~i 334 (334)
|++|+|+|++||||
T Consensus 508 l~~A~e~a~~iL~i 521 (528)
T 3p9d_D 508 ITLASECVKSILRI 521 (528)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999987
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=7.8e-61 Score=485.28 Aligned_cols=286 Identities=20% Similarity=0.245 Sum_probs=259.5
Q ss_pred cEEEeecCC------ChhHhHHHHHHHhh---------------------------cceee--ee--eEEeecCeEEEee
Q 019867 2 KVGTTAANG------DGEIGELIAKVFEK---------------------------GWEND--LI--TIFVLDGALVLIY 44 (334)
Q Consensus 2 ~va~isan~------d~~~g~lia~a~~~---------------------------G~~~~--~~--~~~~l~~p~Ill~ 44 (334)
+||++|+|+ |+.+|+||++|+.+ ||.|| +. +|.+++||+||++
T Consensus 155 ~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll 234 (527)
T 3p9d_B 155 HIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIA 234 (527)
T ss_dssp HHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEE
T ss_pred HHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEe
Confidence 678888886 78999999999987 77777 44 4778999999998
Q ss_pred ccC--------------CCChHHH-----------HHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEEEEec
Q 019867 45 DTK--------------ISNSNVI-----------RQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKA 99 (334)
Q Consensus 45 d~~--------------i~~~~~i-----------~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~aVk~ 99 (334)
|++ |++++++ .++++++.++|+||||++++|++.++++|..|+ +++|+.
T Consensus 235 ~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~ 308 (527)
T 3p9d_B 235 NTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEH 308 (527)
T ss_dssp CSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCC
T ss_pred ccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEec
Confidence 874 4556665 678899999999999999999999999999874 678887
Q ss_pred cCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhh
Q 019867 100 AGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKL 176 (334)
Q Consensus 100 p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~ 176 (334)
|+ +.+|+|||++|||+++++ ++++++++||+|+.|+ +++++++++.+|+
T Consensus 309 ~~-----~~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~------------------ 360 (527)
T 3p9d_B 309 AD-----FEGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCK------------------ 360 (527)
T ss_dssp CH-----HHHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSC------------------
T ss_pred CC-----HHHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEecceEEEEEECCC------------------
Confidence 65 567999999999999999 8999999999999998 5678888888875
Q ss_pred ccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHH
Q 019867 177 STSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQK 254 (334)
Q Consensus 177 ~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~ 254 (334)
++++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. ++++|
T Consensus 361 -------------~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 427 (527)
T 3p9d_B 361 -------------AGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKS 427 (527)
T ss_dssp -------------CSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHH
T ss_pred -------------CCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHH
Confidence 24699999999999999999999999999999999988 9999999999999999998766 89999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHH
Q 019867 255 IGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISL 330 (334)
Q Consensus 255 ~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~ 330 (334)
+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+|+||++.|||||++||+++|++|+|+|++
T Consensus 428 ~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~ 507 (527)
T 3p9d_B 428 LAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEV 507 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 9999874 567899999999999999999999999999999999999999
Q ss_pred HhcC
Q 019867 331 KNAI 334 (334)
Q Consensus 331 iL~i 334 (334)
||||
T Consensus 508 iL~i 511 (527)
T 3p9d_B 508 LLRV 511 (527)
T ss_dssp HHHC
T ss_pred HHhH
Confidence 9986
No 21
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-58 Score=467.52 Aligned_cols=262 Identities=19% Similarity=0.248 Sum_probs=230.5
Q ss_pred cceee--ee---eEEeecCeEEEeeccCC-------------CChHHHHH------------------HhhHHH-HhCCc
Q 019867 25 GWEND--LI---TIFVLDGALVLIYDTKI-------------SNSNVIRQ------------------ASLPCM-MQGQS 67 (334)
Q Consensus 25 G~~~~--~~---~~~~l~~p~Ill~d~~i-------------~~~~~i~~------------------~le~i~-~~~~~ 67 (334)
||.|| +. |+.+++||+||++|+++ ++++++.+ +.+.++ +.++|
T Consensus 201 G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~ 280 (517)
T 3iyg_Z 201 GLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKG 280 (517)
T ss_pred eEEEeccCCCCCccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCc
Confidence 77777 44 89999999999999975 33333333 222222 24678
Q ss_pred EEEEe-ccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCC-ceeeeEE-
Q 019867 68 LLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCKRV- 144 (334)
Q Consensus 68 llIia-~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~-LG~a~~v- 144 (334)
+||++ ++|++.|+++|..+ ++++|+. .++++|+|||++|||+++++ ++++++++ ||+|+ |
T Consensus 281 lvIi~~~~I~d~al~~L~~~------gI~~v~~-----v~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~-v~ 343 (517)
T 3iyg_Z 281 FVVINQKGIDPFSLDALAKE------GIIALRR-----AKRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG-VY 343 (517)
T ss_pred eEEEecccCCHHHHHHHHHC------CCEEEEe-----cCHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce-EE
Confidence 87776 89999999999975 3566664 34789999999999999998 99999999 99999 9
Q ss_pred --EEecceEEEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHH
Q 019867 145 --IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 222 (334)
Q Consensus 145 --~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~ 222 (334)
.+++++++++.+|+++. .|||+|||+|+.+++|.||+++||||++|+
T Consensus 344 e~~ig~~~~~~~~g~~~~~-------------------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~ 392 (517)
T 3iyg_Z 344 EYTLGEEKFTFIEKCNNPR-------------------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKN 392 (517)
T ss_pred EEEEcCceEEEEeCCCCch-------------------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999987533 689999999999999999999999999999
Q ss_pred HhhcC-ccccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEe
Q 019867 223 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYN 296 (334)
Q Consensus 223 a~~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d 296 (334)
++++| +|||||++|++++..|++++.. ++++|+|+++|++||+.+|++||+|||+|+.+ +.+|++. ++.++|||
T Consensus 393 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d 472 (517)
T 3iyg_Z 393 AIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVD 472 (517)
T ss_pred HHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEe
Confidence 99988 9999999999999999999876 89999999999999999999999999999999 9999874 46789999
Q ss_pred cCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 297 PARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 297 ~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
+.+|+|.||++.|||||++||+++|++|+++|++||||
T Consensus 473 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 473 LNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred CCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986
No 22
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-58 Score=464.23 Aligned_cols=263 Identities=14% Similarity=0.200 Sum_probs=239.1
Q ss_pred cceee--ee---eEEeecCeEEEeecc-------------CCCChHHHHHHhh-----------HHHHhCCcEEEEeccc
Q 019867 25 GWEND--LI---TIFVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQSLLVVAEDV 75 (334)
Q Consensus 25 G~~~~--~~---~~~~l~~p~Ill~d~-------------~i~~~~~i~~~le-----------~i~~~~~~llIia~~i 75 (334)
||.|| +. |+.+++|||||++|+ +|++++++.|+++ ++.+.|..++|+.++|
T Consensus 205 G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I 284 (515)
T 3iyg_G 205 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGI 284 (515)
T ss_pred eEEEeCCCCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 66666 44 899999999999999 7899999999988 8888886677777799
Q ss_pred cccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCcee-eeEEEEec---ceE
Q 019867 76 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIATM---DNV 151 (334)
Q Consensus 76 ~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~v~~---~~~ 151 (334)
++.++++|..+ +|++| ++.++++|+|||++|||+++++ ++++++++||+ |+.|++.+ +++
T Consensus 285 ~~~al~~L~~~------~I~av-----~~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~~~~g~~~~ 348 (515)
T 3iyg_G 285 SDLAQHYLMRA------NITAI-----RRVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEIKKIGDEYF 348 (515)
T ss_pred CHHHHHHHHHC------Cceee-----ccCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEEEEECCceE
Confidence 99999999864 45655 5778999999999999999999 99999999999 99998654 579
Q ss_pred EEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHh-hcCccc
Q 019867 152 VIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK-EEGIVP 230 (334)
Q Consensus 152 ~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~-~~gvVp 230 (334)
+|+.+|+++ ++|||+|||+|+++++|+||+++||||++|+++ ++++||
T Consensus 349 ~~i~g~~~~-------------------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivp 397 (515)
T 3iyg_G 349 TFITECKDP-------------------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVP 397 (515)
T ss_pred EEEeCCCCC-------------------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence 999998753 379999999999999999999999999999999 679999
Q ss_pred cccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc----CCCCeeEecCCCceec
Q 019867 231 GSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ----DSSDLGYNPARGNYVD 304 (334)
Q Consensus 231 GGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~----~~~~~G~d~~~g~~~d 304 (334)
|||++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+||.+ +.+|++. ++.++|||+.+|++.|
T Consensus 398 GGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d 477 (515)
T 3iyg_G 398 GGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVD 477 (515)
T ss_pred CCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccc
Confidence 9999999999999998766 89999999999999999999999999999999 9999864 2457999999999999
Q ss_pred cccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 305 MFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 305 m~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
|++.|||||++||+++|++|+|+|++||||
T Consensus 478 ~~~~gi~dp~~vk~~al~~A~e~a~~iL~i 507 (515)
T 3iyg_G 478 MKELGIWEPLAVKLQTYKTAVETAVLLLRI 507 (515)
T ss_pred cHHcCCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999986
No 23
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2.6e-59 Score=475.72 Aligned_cols=286 Identities=16% Similarity=0.162 Sum_probs=256.8
Q ss_pred cEEEee------cCCChhHhHHHHHHHhh----------------------------cceee-------ee-eEEeecCe
Q 019867 2 KVGTTA------ANGDGEIGELIAKVFEK----------------------------GWEND-------LI-TIFVLDGA 39 (334)
Q Consensus 2 ~va~is------an~d~~~g~lia~a~~~----------------------------G~~~~-------~~-~~~~l~~p 39 (334)
+||++| +.+|+.+|+||++|+.+ ||.|| |. |+..++||
T Consensus 160 ~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~ 239 (550)
T 3p9d_G 160 RCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNP 239 (550)
T ss_dssp HHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSC
T ss_pred HHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCc
Confidence 456655 34588999999999986 88888 44 88899999
Q ss_pred EEEeeccC-------------CCChHHHHH-----------HhhHHHHhCCcEEEEeccccccchhhhhhcccCCcceEE
Q 019867 40 LVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVC 95 (334)
Q Consensus 40 ~Ill~d~~-------------i~~~~~i~~-----------~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~~v~ 95 (334)
|||++|++ |++++++.+ +++++.++|.+|||++++|++.++++|..++ +.
T Consensus 240 kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~ 313 (550)
T 3p9d_G 240 KILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IF 313 (550)
T ss_dssp CEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CE
T ss_pred eEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Cc
Confidence 99999997 678877776 5678899999999999999999999988543 34
Q ss_pred EEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHH
Q 019867 96 IIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVIIGGSGELVDIQERCEQLRS 172 (334)
Q Consensus 96 aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v---~~~~~~~i~~~~~~~~i~~ri~~l~~ 172 (334)
++ ++.++++|+|||++|||+++++ ++++++++||+|+.|++ ++++++++.+|++
T Consensus 314 ~v-----~~v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~------------- 370 (550)
T 3p9d_G 314 CA-----GRVSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQ------------- 370 (550)
T ss_dssp EE-----ECCCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTT-------------
T ss_pred cc-----cCcCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEeCCeEEEEEecCCC-------------
Confidence 44 4677899999999999999998 99999999999999986 5678888988753
Q ss_pred HhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHHHHcCC-C
Q 019867 173 TIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSGVALLYASKELDKLQTT-N 250 (334)
Q Consensus 173 ~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g-vVpGGGaael~~s~~L~~~~~~-~ 250 (334)
+++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++..|++++.. +
T Consensus 371 ------------------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~ 432 (550)
T 3p9d_G 371 ------------------AKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIA 432 (550)
T ss_dssp ------------------CCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCC
T ss_pred ------------------CceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCC
Confidence 3589999999999999999999999999999999987 9999999999999999998766 8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc---CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHH
Q 019867 251 SDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ---DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATS 326 (334)
Q Consensus 251 ~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~---~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~ 326 (334)
+++|+|+++|++||+.||++||+|||+|+.+ +.+|++. +++++|||+.+|+|+||++.|||||++||+++|++|+|
T Consensus 433 g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 512 (550)
T 3p9d_G 433 GKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATE 512 (550)
T ss_dssp STTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999864 56789999999999999999999999999999999999
Q ss_pred HHHHHhcC
Q 019867 327 MISLKNAI 334 (334)
Q Consensus 327 ~a~~iL~i 334 (334)
+|++||||
T Consensus 513 ~a~~iL~i 520 (550)
T 3p9d_G 513 ATNLILSV 520 (550)
T ss_dssp HHHHHHTE
T ss_pred HHHHHHhH
Confidence 99999986
No 24
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.9e-58 Score=470.47 Aligned_cols=263 Identities=21% Similarity=0.209 Sum_probs=238.7
Q ss_pred cceee--ee---eEEee------cCeEEEeeccC-------------CCChHH-----------HHHHhhHHHHhCCcEE
Q 019867 25 GWEND--LI---TIFVL------DGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLL 69 (334)
Q Consensus 25 G~~~~--~~---~~~~l------~~p~Ill~d~~-------------i~~~~~-----------i~~~le~i~~~~~~ll 69 (334)
||.|| +. |+..+ +||+|++++++ |+++++ +.++++++.++|+|||
T Consensus 242 Gmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vv 321 (562)
T 3p9d_E 242 GVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVV 321 (562)
T ss_dssp SEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCC
T ss_pred eEEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 77787 54 77777 89999999873 566666 6789999999999999
Q ss_pred EEeccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEE---
Q 019867 70 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 146 (334)
Q Consensus 70 Iia~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v--- 146 (334)
|++++|+++|+++|+.|++. +|+.+ ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 322 I~~~~I~~~Al~~L~~~~I~------~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~~~i 385 (562)
T 3p9d_E 322 ICQWGFDDEANHLLLQNDLP------AVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYEQEF 385 (562)
T ss_dssp EECSSCCSHHHHHHHTTTCC------CEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEEECC
T ss_pred EEeCCCCHHHHHHHHHCCCE------EEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEe
Confidence 99999999999999998765 45544 4788999999999999999 99999999999999998
Q ss_pred --ecceEEEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHh
Q 019867 147 --TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 224 (334)
Q Consensus 147 --~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~ 224 (334)
++++++++.+|+++ +.|||+|||+|+.+++|+||+++||||++|+++
T Consensus 386 g~~~~~~~~i~g~~~~-------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av 434 (562)
T 3p9d_E 386 GTTKDRMLIIEQSKET-------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLV 434 (562)
T ss_dssp SSSSCCEEEECCCSCC-------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEecCCCC-------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999998742 478999999999999999999999999999999
Q ss_pred hcC-ccccccHHHHHHHHHHHHHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc----CCCCeeEec
Q 019867 225 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ----DSSDLGYNP 297 (334)
Q Consensus 225 ~~g-vVpGGGaael~~s~~L~~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~----~~~~~G~d~ 297 (334)
++| +|||||++|++++..|++++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+
T Consensus 435 ~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~ 514 (562)
T 3p9d_E 435 KDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDC 514 (562)
T ss_dssp HSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBT
T ss_pred hCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEec
Confidence 988 9999999999999999999776 88999999999999999999999999999999 9999863 457899999
Q ss_pred CCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 298 ARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 298 ~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
.+|+|+||++.|||||++||+++|++|+|+|++||||
T Consensus 515 ~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 551 (562)
T 3p9d_E 515 LGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKI 551 (562)
T ss_dssp TTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=4.1e-59 Score=474.34 Aligned_cols=263 Identities=17% Similarity=0.221 Sum_probs=225.3
Q ss_pred cceee--ee---eEEeecCeEEEeeccCCC-------------ChH------------------HHHHHhhHHHH--hCC
Q 019867 25 GWEND--LI---TIFVLDGALVLIYDTKIS-------------NSN------------------VIRQASLPCMM--QGQ 66 (334)
Q Consensus 25 G~~~~--~~---~~~~l~~p~Ill~d~~i~-------------~~~------------------~i~~~le~i~~--~~~ 66 (334)
||.|| +. |+.+++|||||++|+++. +++ +|.|+++.+.+ +|+
T Consensus 212 G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~ 291 (546)
T 3p9d_F 212 GLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDK 291 (546)
T ss_dssp SCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred eEEEecccccccCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 77777 44 899999999999998642 222 22333333333 678
Q ss_pred cEEEEe-ccccccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEE-
Q 019867 67 SLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV- 144 (334)
Q Consensus 67 ~llIia-~~i~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v- 144 (334)
|+||++ ++|+++|+++|+.|+ +++|+. .++.+|+|||++|||+++++ ++++++++||+|++|
T Consensus 292 ~~vIi~~k~I~~~Al~~L~~~g------I~~vr~-----v~~~~leria~~tGa~ii~~-----l~~l~~~~LG~a~~v~ 355 (546)
T 3p9d_F 292 GFVIINQKGIDPMSLDVFAKHN------ILALRR-----AKRRNMERLQLVTGGEAQNS-----VEDLSPQILGFSGLVY 355 (546)
T ss_dssp -CEEEESSCCCHHHHHHHTTTT------CEEECC-----CCHHHHHHHHHTTTBCCCCC-----CSSCSTTCCBCCCCBC
T ss_pred ceEEEecCcCcHHHHHHHHHCC------CeeEec-----CCHHHHHHHHHHhCCEEecc-----hhhCCHhHCCcccEEE
Confidence 877776 599999999999885 466764 45789999999999999998 999999999999999
Q ss_pred --EEecceEEEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHH
Q 019867 145 --IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 222 (334)
Q Consensus 145 --~v~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~ 222 (334)
.+++++++|+.+|+++ ..|||+|||+|+.+++|+||+++||||++|+
T Consensus 356 ~~~ig~~~~~~i~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~ 404 (546)
T 3p9d_F 356 QETIGEEKFTYVTENTDP-------------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVAN 404 (546)
T ss_dssp BCCCSSCCCEECSSCSCC-------------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCceEEEEecCCCC-------------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999998753 3799999999999999999999999999999
Q ss_pred HhhcC-ccccccHHHHHHHHHHHH---HcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc--------
Q 019867 223 AKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ-------- 288 (334)
Q Consensus 223 a~~~g-vVpGGGaael~~s~~L~~---~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~-------- 288 (334)
++++| +|||||++|++++..|++ ++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++.
T Consensus 405 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 484 (546)
T 3p9d_F 405 VLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSD 484 (546)
T ss_dssp HTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTST
T ss_pred HhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhccc
Confidence 99887 999999999999999998 4555 89999999999999999999999999999999 9999863
Q ss_pred CCCCeeEecCCCceeccccCCcccccccHHHHHHHHHHHHHHHhcC
Q 019867 289 DSSDLGYNPARGNYVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 289 ~~~~~G~d~~~g~~~dm~~~GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
++.++|||+.+|+|+||++.|||||++||+++|++|+|+|++||||
T Consensus 485 ~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~i 530 (546)
T 3p9d_F 485 ETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLC 530 (546)
T ss_dssp TSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTE
T ss_pred CCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999999999999999999999999999999999999986
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2.3e-59 Score=477.81 Aligned_cols=288 Identities=15% Similarity=0.161 Sum_probs=255.6
Q ss_pred cEEEeec-----CCChhHhHHHHHHHhh------------------------------------cceee--ee-eEEeec
Q 019867 2 KVGTTAA-----NGDGEIGELIAKVFEK------------------------------------GWEND--LI-TIFVLD 37 (334)
Q Consensus 2 ~va~isa-----n~d~~~g~lia~a~~~------------------------------------G~~~~--~~-~~~~l~ 37 (334)
+||++|. ++|+.+|+||++|+.+ ||.|+ +. |+.+++
T Consensus 161 ~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~~m~~~i~ 240 (568)
T 3p9d_H 161 KMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPEGHVKSLS 240 (568)
T ss_dssp HHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBSSGGGSCC
T ss_pred HHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecccCCcEEEe
Confidence 4566553 3568899999999864 44444 33 788999
Q ss_pred ---CeEEEeeccC-------------CCChHHHHH-----------HhhHHHHhCCcEEEEeccccccchhhhhhcccCC
Q 019867 38 ---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 90 (334)
Q Consensus 38 ---~p~Ill~d~~-------------i~~~~~i~~-----------~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g 90 (334)
||+|+++|++ |++++++.+ +++++.++|+||||++++|++.|+++|..|
T Consensus 241 ~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~---- 316 (568)
T 3p9d_H 241 EDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY---- 316 (568)
T ss_dssp CCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH----
T ss_pred cCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC----
Confidence 9999999997 788888876 678899999999999999999999999975
Q ss_pred cceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEec---ceEEEEcCCCChhhHHHHH
Q 019867 91 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATM---DNVVIIGGSGELVDIQERC 167 (334)
Q Consensus 91 ~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~~---~~~~~i~~~~~~~~i~~ri 167 (334)
+|++|+.|+ +.+|+|||++|||+++++ ++++++++||+|+.|++.+ ++++++.+|+
T Consensus 317 --gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~--------- 375 (568)
T 3p9d_H 317 --GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQ--------- 375 (568)
T ss_dssp --TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEECSCCCCCEETTEECBCCCCCS---------
T ss_pred --CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEEEEecCceEEEEecCC---------
Confidence 589999886 778999999999999999 9999999999999997554 8899999875
Q ss_pred HHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhh---cCccccccHHHHHHHHHHH
Q 019867 168 EQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE---EGIVPGSGVALLYASKELD 244 (334)
Q Consensus 168 ~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~---~gvVpGGGaael~~s~~L~ 244 (334)
.+++++|||+|||+|+.+++|.||+++||||++|++++ +++|||||++|++++..|+
T Consensus 376 --------------------~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~ 435 (568)
T 3p9d_H 376 --------------------GEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRIT 435 (568)
T ss_dssp --------------------SSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHH
T ss_pred --------------------CCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHH
Confidence 13467999999999999999999999999999999999 7899999999999999999
Q ss_pred HHcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHhc-----------CCCCeeEecCCCc---eeccccC
Q 019867 245 KLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSV-IDKLLEQ-----------DSSDLGYNPARGN---YVDMFKC 308 (334)
Q Consensus 245 ~~~~~-~~~~~~g~~~~~~AL~~p~~~La~NaG~d~~~-~~kl~~~-----------~~~~~G~d~~~g~---~~dm~~~ 308 (334)
+++.. ++++|+|+++|++||+.||++||+|||+|+.+ +.+|++. ++.++|||+.+|+ |.||++.
T Consensus 436 ~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~ 515 (568)
T 3p9d_H 436 KYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREE 515 (568)
T ss_dssp HHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHH
T ss_pred HHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHc
Confidence 99766 89999999999999999999999999999999 9999875 3457999999997 9999999
Q ss_pred CcccccccHHHHHHHHHHHHHHHhcC
Q 019867 309 GDVDPLKHVPSEFAKATSMISLKNAI 334 (334)
Q Consensus 309 GIiDp~~v~~~al~~A~~~a~~iL~i 334 (334)
|||||++||+++|++|+|+|++||||
T Consensus 516 gI~dp~~vk~~al~~A~e~a~~iL~i 541 (568)
T 3p9d_H 516 NIYDMLATKKFAINVATEAATTVLSI 541 (568)
T ss_dssp HHHHHHHHHHHHHHCCEECBCCC---
T ss_pred cCEEcHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999986
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-49 Score=344.47 Aligned_cols=172 Identities=38% Similarity=0.529 Sum_probs=168.5
Q ss_pred cceee-------ee-----eEEeecCeEEEeeccCCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcc
Q 019867 25 GWEND-------LI-----TIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 92 (334)
Q Consensus 25 G~~~~-------~~-----~~~~l~~p~Ill~d~~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~ 92 (334)
||+|| |+ |.++|+|||||++|+||+++++++|+||.+.++|+||||||+||+++||++|+.|+++|++
T Consensus 7 GmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNklrg~l 86 (194)
T 3m6c_A 7 GIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTL 86 (194)
T ss_dssp SEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHHTSS
T ss_pred eeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhhccceE
Confidence 99999 66 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHH
Q 019867 93 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRS 172 (334)
Q Consensus 93 ~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~i~~ri~~l~~ 172 (334)
+|||||+|+||++||+.|+|||++|||++++++.|+++++++.++||+|++|.+++|+|++++|.|++++|++||+||++
T Consensus 87 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv~qIr~ 166 (194)
T 3m6c_A 87 KAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRAKHLRA 166 (194)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhccch----hHHHHHhhhcCCeEEE
Q 019867 173 TIKLSTSD----KLKDRLAKLSGGYAVL 196 (334)
Q Consensus 173 ~~~~~~~~----~l~eR~~~lsg~~~tI 196 (334)
+++.++|+ +|+||+++|+||+|+|
T Consensus 167 ~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 167 EIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 99999987 9999999999999865
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=9.1e-49 Score=342.49 Aligned_cols=171 Identities=36% Similarity=0.507 Sum_probs=167.4
Q ss_pred cceee-------ee-----eEEeecCeEEEeeccCCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcc
Q 019867 25 GWEND-------LI-----TIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 92 (334)
Q Consensus 25 G~~~~-------~~-----~~~~l~~p~Ill~d~~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~ 92 (334)
||+|| |+ |.++|+|||||++|+||+++++++|+||.+.++|+||||||+||+++||++|+.|+++|++
T Consensus 14 ~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l 93 (201)
T 3osx_A 14 GMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIV 93 (201)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSC
T ss_pred ccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccceE
Confidence 99999 66 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHH
Q 019867 93 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRS 172 (334)
Q Consensus 93 ~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~~~~~~~i~~ri~~l~~ 172 (334)
+|||||+|+||++||..|+|||++|||++++++.|+++++++.++||+|++|++++|+|++++|.|++++|++||+||++
T Consensus 94 ~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qIr~ 173 (201)
T 3osx_A 94 KVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQIRQ 173 (201)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhccch----hHHHHHhhhcCCeEE
Q 019867 173 TIKLSTSD----KLKDRLAKLSGGYAV 195 (334)
Q Consensus 173 ~~~~~~~~----~l~eR~~~lsg~~~t 195 (334)
+++.++|+ +|+||+++|+||+|+
T Consensus 174 qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 174 QIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999987 999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=2.6e-39 Score=270.10 Aligned_cols=132 Identities=33% Similarity=0.504 Sum_probs=129.4
Q ss_pred cceee-------ee-----eEEeecCeEEEeeccCCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhcccCCcc
Q 019867 25 GWEND-------LI-----TIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 92 (334)
Q Consensus 25 G~~~~-------~~-----~~~~l~~p~Ill~d~~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n~~~g~~ 92 (334)
||+|| |+ |.++|+|||||++|+||+++++++|+||++.++|+||||||+||+++||++|+.|+++|++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999 66 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEEEecceEEEEcC
Q 019867 93 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 156 (334)
Q Consensus 93 ~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~v~~~~~~~i~~ 156 (334)
++||||+|+||++||+.|+|||++|||++++++.|+++++++.++||+|++|++++|+|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.79 E-value=1.6e-19 Score=158.24 Aligned_cols=133 Identities=10% Similarity=0.128 Sum_probs=107.2
Q ss_pred cceee--ee---eEEeecCeEEEeeccCC-------------CChHH-----------HHHHhhHHHHhCCcEEEEeccc
Q 019867 25 GWEND--LI---TIFVLDGALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQGQSLLVVAEDV 75 (334)
Q Consensus 25 G~~~~--~~---~~~~l~~p~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~~~~llIia~~i 75 (334)
|+.|+ +. ||..++||+|+++|+++ +++++ +..+++++.++|.++|+++++|
T Consensus 9 Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I 88 (178)
T 1gml_A 9 GVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGI 88 (178)
T ss_dssp EEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCB
T ss_pred EEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEECCcc
Confidence 77887 44 89999999999999954 33333 3445678999999999999999
Q ss_pred cccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCcee-eeEEE---EecceE
Q 019867 76 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVI---ATMDNV 151 (334)
Q Consensus 76 ~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~---v~~~~~ 151 (334)
++.|+++|..+ +|.+|+ +.++++|++||++|||+++++ ++++++++||+ |+.|+ ++++++
T Consensus 89 ~d~a~~~l~k~------gI~~vr-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~~v~~~~ig~~~~ 152 (178)
T 1gml_A 89 SDLAQHYLMRA------NVTAIR-----RVRKTDNNRIARACGARIVSR-----PEELREDDVGTGAGLLEIKKIGDEYF 152 (178)
T ss_dssp CHHHHHHHHHT------TCEEEC-----CCCHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCCEEEEEEEEETTEEE
T ss_pred cHHHHHHHHHC------CCEEEe-----cCCHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCcccEEEEEEECCeEE
Confidence 99999999975 466777 456899999999999999999 99999999999 99997 456789
Q ss_pred EEEcCCCChhhHHHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHh
Q 019867 152 VIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 204 (334)
Q Consensus 152 ~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~ 204 (334)
+++.||.. +++|||++||++.+
T Consensus 153 ~~~~gc~~-------------------------------~~~~TIllRG~~~~ 174 (178)
T 1gml_A 153 TFITDCKD-------------------------------PKACTILLRGASHH 174 (178)
T ss_dssp EEEEEESS-------------------------------TTSCEEEEEC----
T ss_pred EEEECCCC-------------------------------CCEEEEEEECCCcc
Confidence 99999864 24799999999854
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.71 E-value=1.5e-17 Score=143.21 Aligned_cols=119 Identities=20% Similarity=0.293 Sum_probs=100.9
Q ss_pred cceee--ee---eEEeecCeEEEeeccCC-------------CChHHH-----------HHHhhHHHHhCCcEEEEeccc
Q 019867 25 GWEND--LI---TIFVLDGALVLIYDTKI-------------SNSNVI-----------RQASLPCMMQGQSLLVVAEDV 75 (334)
Q Consensus 25 G~~~~--~~---~~~~l~~p~Ill~d~~i-------------~~~~~i-----------~~~le~i~~~~~~llIia~~i 75 (334)
|+.|+ +. ||..++||+|+++|+++ ++++++ ...++++.++|.++||++++|
T Consensus 3 Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k~I 82 (159)
T 1ass_A 3 GIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGI 82 (159)
T ss_dssp CEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESSCB
T ss_pred eEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECCcc
Confidence 77787 55 89999999999999954 455554 445678999999999999999
Q ss_pred cccchhhhhhcccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeCCCCCcccCCCCCCceeeeEEE---EecceEE
Q 019867 76 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---ATMDNVV 152 (334)
Q Consensus 76 ~~~aL~~L~~n~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---v~~~~~~ 152 (334)
++.|+++|..+ +|.+|+ +.++++|++||++|||+++++ ++++++++||+|+.|+ +++++++
T Consensus 83 ~d~a~~~l~k~------gI~~v~-----~v~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e~~ig~~~~~ 146 (159)
T 1ass_A 83 DDVAQHYLAKE------GIYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKIGDDRMT 146 (159)
T ss_dssp CHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEEEEETTEEEE
T ss_pred CHHHHHHHHHC------CCEEEc-----cCCHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEEEEECCeEEE
Confidence 99999999975 467777 456899999999999999999 9999999999999997 4578899
Q ss_pred EEcCCCC
Q 019867 153 IIGGSGE 159 (334)
Q Consensus 153 ~i~~~~~ 159 (334)
++.+|.+
T Consensus 147 ~~~g~~~ 153 (159)
T 1ass_A 147 FVMGCKN 153 (159)
T ss_dssp EEESCC-
T ss_pred EEECCCC
Confidence 9999864
No 32
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=36.47 E-value=1.2e+02 Score=26.82 Aligned_cols=59 Identities=25% Similarity=0.278 Sum_probs=35.7
Q ss_pred cEEEeecCCChhHhHHHHHHHhh-cceeeeeeEEeecCeEEEeeccCCCChHHHHHHhhHHHHhCCcEEEEeccccc
Q 019867 2 KVGTTAANGDGEIGELIAKVFEK-GWENDLITIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVEN 77 (334)
Q Consensus 2 ~va~isan~d~~~g~lia~a~~~-G~~~~~~~~~~l~~p~Ill~d~~i~~~~~i~~~le~i~~~~~~llIia~~i~~ 77 (334)
+||.|+.. -+.||+-||+.+.+ | +.|.++|. +.+.+....+.+.+.|...+.+.-|+++
T Consensus 8 KvalVTGa-s~GIG~aiA~~la~~G-------------a~Vv~~~~---~~~~~~~~~~~i~~~g~~~~~~~~Dvt~ 67 (254)
T 4fn4_A 8 KVVIVTGA-GSGIGRAIAKKFALND-------------SIVVAVEL---LEDRLNQIVQELRGMGKEVLGVKADVSK 67 (254)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTT-------------CEEEEEES---CHHHHHHHHHHHHHTTCCEEEEECCTTS
T ss_pred CEEEEeCC-CCHHHHHHHHHHHHcC-------------CEEEEEEC---CHHHHHHHHHHHHhcCCcEEEEEccCCC
Confidence 58888875 68899999999986 5 44555554 2333444444444555555544444443
No 33
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=36.35 E-value=35 Score=29.79 Aligned_cols=73 Identities=14% Similarity=0.117 Sum_probs=51.0
Q ss_pred eEEeecCeEEEeeccCCCChHHHHHHhhHHHHhCCc---EEEEeccccccchhhhhhcccCCcceEEEEe---------c
Q 019867 32 TIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQS---LLVVAEDVENEVLGDIATDFTCTTEKVCIIK---------A 99 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~~i~~~le~i~~~~~~---llIia~~i~~~aL~~L~~n~~~g~~~v~aVk---------~ 99 (334)
.| .+++-.+++.|--+.+=..+..+++.+++.|+| +.+++-=.+++.+..|...+-.-.+.+.+|. .
T Consensus 124 lP-~i~~~~VilvD~~laTG~T~~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~~~~P~v~i~ta~iD~~Lne~~yIv 202 (217)
T 3dmp_A 124 LP-DLEDRIFILCDPMVATGYSAAHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQDAHPDVKLYVASLDSHLDDHAYIV 202 (217)
T ss_dssp CC-CCTTCEEEEECSEESSSHHHHHHHHHHHTTTCCGGGEEEECSEECHHHHHHHHHHCTTCEEEESEECCEECTTSCEE
T ss_pred CC-CCCCCEEEEEcCcccccHHHHHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHHHHCCCCEEEEEEecCCcCCCCCcc
Confidence 35 677788999999898888999999999999975 5555444467777777765543334444443 4
Q ss_pred cCcccc
Q 019867 100 AGLAED 105 (334)
Q Consensus 100 p~~g~~ 105 (334)
||+||.
T Consensus 203 PGlGDa 208 (217)
T 3dmp_A 203 PGLGDA 208 (217)
T ss_dssp SSCSCH
T ss_pred CCCCCH
Confidence 677765
No 34
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=33.82 E-value=1e+02 Score=27.18 Aligned_cols=23 Identities=17% Similarity=0.211 Sum_probs=19.2
Q ss_pred cEEEeecCCChhHhHHHHHHHhh-c
Q 019867 2 KVGTTAANGDGEIGELIAKVFEK-G 25 (334)
Q Consensus 2 ~va~isan~d~~~g~lia~a~~~-G 25 (334)
+||.|+.. -+.||+-||+.+.+ |
T Consensus 10 KvalVTGa-s~GIG~aia~~la~~G 33 (255)
T 4g81_D 10 KTALVTGS-ARGLGFAYAEGLAAAG 33 (255)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTT
T ss_pred CEEEEeCC-CcHHHHHHHHHHHHCC
Confidence 58888775 68899999999987 6
No 35
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=32.63 E-value=34 Score=30.16 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=34.3
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEeccccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVEN 77 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~~ 77 (334)
...-+.+|.++++|.+.+..+ ++..++....+.|..++++.-+.+.
T Consensus 165 AraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~~ 215 (257)
T 1g6h_A 165 GRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDI 215 (257)
T ss_dssp HHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCST
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHH
Confidence 345678999999999876653 5677777776668888888776554
No 36
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.80 E-value=38 Score=25.03 Aligned_cols=33 Identities=18% Similarity=0.236 Sum_probs=25.4
Q ss_pred CChHHHHHHhhHHHHhCCcEEEEeccccccchh
Q 019867 49 SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLG 81 (334)
Q Consensus 49 ~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~ 81 (334)
++.+++..++...+..|+||+++-.+-+..-..
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvn 67 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVN 67 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHH
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHH
Confidence 567889999999999999998886665544333
No 37
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=30.63 E-value=42 Score=28.85 Aligned_cols=45 Identities=9% Similarity=0.141 Sum_probs=33.5
Q ss_pred eEEeecCeEEEeeccCCCCh-----HHHHHHhhHHHHhCCcEEEEecccc
Q 019867 32 TIFVLDGALVLIYDTKISNS-----NVIRQASLPCMMQGQSLLVVAEDVE 76 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~-----~~i~~~le~i~~~~~~llIia~~i~ 76 (334)
...-+.+|.++++|.+.+.. ..+..++....+.|..++++.-+.+
T Consensus 145 araL~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~ 194 (214)
T 1sgw_A 145 ASTLLVNAEIYVLDDPVVAIDEDSKHKVLKSILEILKEKGIVIISSREEL 194 (214)
T ss_dssp HHHTTSCCSEEEEESTTTTSCTTTHHHHHHHHHHHHHHHSEEEEEESSCC
T ss_pred HHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 35567899999999986543 4677788877766888888876654
No 38
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=30.08 E-value=64 Score=29.19 Aligned_cols=59 Identities=20% Similarity=0.294 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC----ccccccHHH
Q 019867 165 ERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG----IVPGSGVAL 236 (334)
Q Consensus 165 ~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g----vVpGGGaae 236 (334)
.+++.|++.+ -.+.+|.++..+|++||..-.. ++ .++.....+....+.| +|.|||..-
T Consensus 9 ~~~~~~~~a~---------pyi~~~~~k~iVIKlGGs~l~~-~~---~~~~~~~~i~~l~~~G~~vVlVhGgG~~i 71 (300)
T 2buf_A 9 QVAKVLSEAL---------PYIRRFVGKTLVIKYGGNAMES-EE---LKAGFARDVVLMKAVGINPVVVHGGGPQI 71 (300)
T ss_dssp HHHHHHHHHH---------HHHHHHTTCEEEEEECCTTTTS-SH---HHHHHHHHHHHHHHTTCEEEEEECCCHHH
T ss_pred HHHHHHHHHh---------HHHHHhcCCeEEEEECchhhCC-ch---HHHHHHHHHHHHHHCCCeEEEEECCcHHH
Confidence 4555665543 3566788899999999986432 12 2233333333333334 789998753
No 39
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=28.02 E-value=57 Score=29.44 Aligned_cols=59 Identities=20% Similarity=0.252 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC----ccccccHHH
Q 019867 165 ERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG----IVPGSGVAL 236 (334)
Q Consensus 165 ~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g----vVpGGGaae 236 (334)
.+++.|++.+ -.+.+|.++..+|++||++-.. +..++.....+....+.| +|.|||..-
T Consensus 19 ~~~~~~~~a~---------pyi~~~~~k~iVIKlGGs~l~~----~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i 81 (298)
T 2rd5_A 19 YRVEILSESL---------PFIQKFRGKTIVVKYGGAAMTS----PELKSSVVSDLVLLACVGLRPILVHGGGPDI 81 (298)
T ss_dssp HHHHHHHHTH---------HHHHHTTTCEEEEEECTHHHHC----HHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred HHHHHHHHHH---------HHHHHhcCCEEEEEECchhhCC----hhHHHHHHHHHHHHHHCCCCEEEEECCcHHH
Confidence 4666666544 3566788899999999975321 123333444443333444 789988753
No 40
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=27.72 E-value=1.2e+02 Score=26.97 Aligned_cols=49 Identities=22% Similarity=0.293 Sum_probs=29.2
Q ss_pred HHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC----ccccccHHH
Q 019867 184 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG----IVPGSGVAL 236 (334)
Q Consensus 184 eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g----vVpGGGaae 236 (334)
-.+.+|.++..+|++||++-.. +.+++.....+....+.| +|.|||..-
T Consensus 14 pyi~~~~~~~iViKlGGs~l~~----~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i 66 (282)
T 2bty_A 14 PYIKEFYGKTFVIKFGGSAMKQ----ENAKKAFIQDIILLKYTGIKPIIVHGGGPAI 66 (282)
T ss_dssp HHHHHHTTCEEEEEECSHHHHS----HHHHHHHHHHHHHHHHTTCEEEEEECCSHHH
T ss_pred HHHHHhcCCeEEEEECchhhCC----hhHHHHHHHHHHHHHHCCCcEEEEECCcHHH
Confidence 3566788889999999975321 123333333333333334 789988754
No 41
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=27.53 E-value=30 Score=20.67 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=14.7
Q ss_pred cCCeEEEEEccCCHhHHHHHHHH
Q 019867 190 SGGYAVLKVCGHGKAEVREKKLK 212 (334)
Q Consensus 190 sg~~~tI~vgG~t~~~~~E~~~~ 212 (334)
||.+-||-||| |+.|++..+..
T Consensus 2 sgqvrtiwvgg-tpeelkklkee 23 (36)
T 2ki0_A 2 SGQVRTIWVGG-TPEELKKLKEE 23 (36)
T ss_dssp CCSCCCCCBCC-CHHHHHHHHHH
T ss_pred CceeEEEEecC-CHHHHHHHHHH
Confidence 35567888887 66777665543
No 42
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=27.52 E-value=40 Score=29.39 Aligned_cols=45 Identities=11% Similarity=0.130 Sum_probs=33.2
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEecccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVE 76 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~ 76 (334)
...-+.+|.++++|.+.+..+ .+..+|....+.|+.++++.-+.+
T Consensus 151 AraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~~~~~g~tvi~vtHd~~ 200 (240)
T 1ji0_A 151 GRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNAL 200 (240)
T ss_dssp HHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH
Confidence 345677999999999876653 466677777667888888876653
No 43
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=26.86 E-value=91 Score=25.79 Aligned_cols=19 Identities=11% Similarity=0.109 Sum_probs=15.2
Q ss_pred chhhHHHHHHhHcCcEEee
Q 019867 105 DRKAIMEDLAILTGGQVLT 123 (334)
Q Consensus 105 ~r~~~Ledia~~tG~~ii~ 123 (334)
.....|+.||..|||+.+.
T Consensus 176 ~~~~~L~~iA~~~gG~~~~ 194 (218)
T 3ibs_A 176 LNEGMCQEIAKDGKGIYVR 194 (218)
T ss_dssp CCHHHHHHHHHHTEEEEEE
T ss_pred CCHHHHHHHHHhcCCEEEE
Confidence 3467899999999998764
No 44
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=26.34 E-value=61 Score=29.74 Aligned_cols=49 Identities=18% Similarity=0.257 Sum_probs=29.5
Q ss_pred HHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC----ccccccHHH
Q 019867 184 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG----IVPGSGVAL 236 (334)
Q Consensus 184 eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g----vVpGGGaae 236 (334)
-.+.+|.++..+|++||+.-.. +..++.....+....+.| +|.|||..-
T Consensus 42 pyi~~~~~k~iVIKlGGs~l~~----~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i 94 (321)
T 2v5h_A 42 PYLQQFAGRTVVVKYGGAAMKQ----EELKEAVMRDIVFLACVGMRPVVVHGGGPEI 94 (321)
T ss_dssp HHHHHTTTCEEEEEECTHHHHS----HHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred HHHHHhCCCeEEEEECchhhCC----chHHHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 3667788899999999975221 123333333333333434 789998743
No 45
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=26.19 E-value=43 Score=28.82 Aligned_cols=45 Identities=18% Similarity=0.230 Sum_probs=33.2
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEecccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVE 76 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~ 76 (334)
...-+.+|.++++|.+.+..+ .+..++....+.|..++++.-+.+
T Consensus 152 aral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 201 (224)
T 2pcj_A 152 ARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEGGTSIVMVTHERE 201 (224)
T ss_dssp HHHTTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 345678999999999876653 466677777666888888876654
No 46
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=25.99 E-value=42 Score=29.73 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=33.1
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEecccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVE 76 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~ 76 (334)
...-+.+|.++++|.+.+..+ .+..++..+.+.|..+|++.-+.+
T Consensus 165 AraL~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~ 214 (262)
T 1b0u_A 165 ARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG 214 (262)
T ss_dssp HHHHHTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 345677999999999876653 466677777666888888866544
No 47
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=25.69 E-value=44 Score=29.57 Aligned_cols=45 Identities=16% Similarity=0.202 Sum_probs=33.3
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEecccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVE 76 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~ 76 (334)
...-+.+|.++++|.+.+..+ .+..+|....+.|..++++.-+.+
T Consensus 158 AraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~ 207 (256)
T 1vpl_A 158 ARALMVNPRLAILDEPTSGLDVLNAREVRKILKQASQEGLTILVSSHNML 207 (256)
T ss_dssp HHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred HHHHHcCCCEEEEeCCccccCHHHHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 355678999999999876653 466677777666888888876654
No 48
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=25.45 E-value=43 Score=29.82 Aligned_cols=46 Identities=11% Similarity=0.168 Sum_probs=33.9
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEeccccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVEN 77 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~~ 77 (334)
...-+.+|.++++|.+.+..+ ++..+|..+.+.|..++++.-+.+.
T Consensus 171 AraL~~~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~tvi~vtHd~~~ 221 (263)
T 2olj_A 171 ARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGF 221 (263)
T ss_dssp HHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred HHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCCHHH
Confidence 355678999999999876653 4666777776668888888766543
No 49
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=25.30 E-value=45 Score=28.93 Aligned_cols=45 Identities=16% Similarity=0.199 Sum_probs=33.6
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHh-CCcEEEEecccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQ-GQSLLVVAEDVE 76 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~-~~~llIia~~i~ 76 (334)
.+.-+.+|.+|++|.+.+..+ ++..++..+.+. |..++++.-+++
T Consensus 157 Aral~~~p~llllDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHd~~ 207 (235)
T 3tif_A 157 ARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN 207 (235)
T ss_dssp HHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEECSCHH
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 355677999999999876643 566677776554 889998887765
No 50
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=24.80 E-value=58 Score=28.82 Aligned_cols=46 Identities=13% Similarity=0.284 Sum_probs=33.8
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEeccccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVEN 77 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~~ 77 (334)
...-+.+|.++++|.+.+..+ .+..+|....+.|..++++.-+.+.
T Consensus 150 AraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tii~vtHd~~~ 200 (266)
T 2yz2_A 150 ASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKWKTLGKTVILISHDIET 200 (266)
T ss_dssp HHHHTTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHTTCEEEEECSCCTT
T ss_pred HHHHHcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence 355678999999999876653 4666777776668888888766544
No 51
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=24.73 E-value=61 Score=29.02 Aligned_cols=46 Identities=15% Similarity=0.210 Sum_probs=34.0
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHH-HhCCcEEEEeccccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCM-MQGQSLLVVAEDVEN 77 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~-~~~~~llIia~~i~~ 77 (334)
...-+.+|.+|++|.+.+..+ ++..++..+. +.|..++++.-+.+.
T Consensus 155 AraL~~~P~lLlLDEPts~LD~~~~~~i~~~l~~l~~~~g~tvi~vtHdl~~ 206 (275)
T 3gfo_A 155 AGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDI 206 (275)
T ss_dssp HHHHTTCCSEEEEECTTTTCCHHHHHHHHHHHHHHHHHHCCEEEEEESCCSS
T ss_pred HHHHHcCCCEEEEECccccCCHHHHHHHHHHHHHHHhhCCCEEEEEecCHHH
Confidence 344677999999999876643 5677777776 568888888776654
No 52
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=23.12 E-value=59 Score=25.03 Aligned_cols=67 Identities=12% Similarity=0.165 Sum_probs=43.5
Q ss_pred HHhhHHHHhCCcEEEEec-cccccchhhhhhc-ccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeC
Q 019867 56 QASLPCMMQGQSLLVVAE-DVENEVLGDIATD-FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTG 124 (334)
Q Consensus 56 ~~le~i~~~~~~llIia~-~i~~~aL~~L~~n-~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~ 124 (334)
..|......-.|+|-|.+ ++++.++..+-.. .-+..++|-..+. .++.+++..+.||..|||.++..
T Consensus 8 ~~LR~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELIKVkvl~~--~~~d~~e~a~~la~~t~a~vVq~ 76 (104)
T 1rq8_A 8 RYLRSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQN--NFDDKKELAETLSEATRSELVQV 76 (104)
T ss_dssp HHHHHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEEEEECCC--CHHHHHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEEEEEeCC--CHHHHHHHHHHHHHHhCCEEEEE
Confidence 344544444479999976 9999888764311 1233344444332 24567888999999999998865
No 53
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=23.07 E-value=1.3e+02 Score=26.94 Aligned_cols=60 Identities=18% Similarity=0.279 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhhhccchhHHHHHhhhcCCeEEEEEccCCHhHHHHHHHHHHHHHHHHHHHhhcC----ccccccHHH
Q 019867 164 QERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG----IVPGSGVAL 236 (334)
Q Consensus 164 ~~ri~~l~~~~~~~~~~~l~eR~~~lsg~~~tI~vgG~t~~~~~E~~~~i~DAl~~~r~a~~~g----vVpGGGaae 236 (334)
..+++.|++.+ -.+.+|.++..+|++||++-.. +..++.....+....+.| +|.|||..-
T Consensus 7 ~~~~~~~~~a~---------pyi~~~~~k~iViKlGGs~l~~----~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i 70 (299)
T 2ap9_A 7 HIKAQVLAEAL---------PWLKQLHGKVVVVKYGGNAMTD----DTLRRAFAADMAFLRNCGIHPVVVHGGGPQI 70 (299)
T ss_dssp HHHHHHHHHHH---------HHHHHHTTCEEEEEECTHHHHS----HHHHHHHHHHHHHHHTTTCEEEEEECCSHHH
T ss_pred hhHHHHHHHHH---------HHHHHhCCCeEEEEECchhhCC----chHHHHHHHHHHHHHHCCCcEEEEECCcHHH
Confidence 34555565543 3566788899999999965221 123333444444433444 789988753
No 54
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=22.73 E-value=66 Score=24.44 Aligned_cols=67 Identities=13% Similarity=0.086 Sum_probs=42.7
Q ss_pred HHhhHHHHhCCcEEEEec-cccccchhhhhhc-ccCCcceEEEEeccCcccchhhHHHHHHhHcCcEEeeC
Q 019867 56 QASLPCMMQGQSLLVVAE-DVENEVLGDIATD-FTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTG 124 (334)
Q Consensus 56 ~~le~i~~~~~~llIia~-~i~~~aL~~L~~n-~~~g~~~v~aVk~p~~g~~r~~~Ledia~~tG~~ii~~ 124 (334)
..|.....+-.|+|-|.+ ++++.++..+-.. .-+..++|-+.+ ...+.+++..+.||..|||.++..
T Consensus 9 ~~Lr~~ah~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~--~~~~~~~e~a~~la~~t~a~~Vq~ 77 (98)
T 1jo0_A 9 QFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAG--ADRETKQLIINAIVRETKAAQVQT 77 (98)
T ss_dssp HHHHHHHTTBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETT--CCHHHHHHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCeEEEEEeC--CCHHHHHHHHHHHHHHhCCEEEEE
Confidence 345555555579999976 9999888764311 112233333322 123556788899999999998865
No 55
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=22.25 E-value=59 Score=28.62 Aligned_cols=46 Identities=4% Similarity=0.111 Sum_probs=33.5
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHh-CCcEEEEeccccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQ-GQSLLVVAEDVEN 77 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~-~~~llIia~~i~~ 77 (334)
...-+.+|.++++|.+.+..+ .+..++....+. |..++++.-+.+.
T Consensus 140 AraL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~ 191 (253)
T 2nq2_C 140 ARAIASECKLILLDEPTSALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQ 191 (253)
T ss_dssp HHHHHTTCSEEEESSSSTTSCHHHHHHHHHHHHHHHHTSCCEEEEEESCHHH
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH
Confidence 455678999999999877653 466677766665 7888888766543
No 56
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=21.23 E-value=43 Score=29.36 Aligned_cols=44 Identities=11% Similarity=0.039 Sum_probs=31.1
Q ss_pred EEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcEEEEecccc
Q 019867 33 IFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSLLVVAEDVE 76 (334)
Q Consensus 33 ~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~llIia~~i~ 76 (334)
..-+.+|.++++|.+.+..+ .+..+|....+.|..++++.-+.+
T Consensus 156 raL~~~p~lllLDEPts~LD~~~~~~l~~~l~~l~~~g~tvi~vtHd~~ 204 (250)
T 2d2e_A 156 QLLVLEPTYAVLDETDSGLDIDALKVVARGVNAMRGPNFGALVITHYQR 204 (250)
T ss_dssp HHHHHCCSEEEEECGGGTTCHHHHHHHHHHHHHHCSTTCEEEEECSSSG
T ss_pred HHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhcCCEEEEEecCHH
Confidence 44567899999999876653 455666665555778888876654
No 57
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=20.78 E-value=1e+02 Score=27.09 Aligned_cols=99 Identities=20% Similarity=0.259 Sum_probs=63.6
Q ss_pred hhHhHHHHHHHhh-cceee--ee--eEEeecCeEEEeeccCCCChHHHHHHhhHHHHhCCcEEEEeccccccchhhhhhc
Q 019867 12 GEIGELIAKVFEK-GWEND--LI--TIFVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATD 86 (334)
Q Consensus 12 ~~~g~lia~a~~~-G~~~~--~~--~~~~l~~p~Ill~d~~i~~~~~i~~~le~i~~~~~~llIia~~i~~~aL~~L~~n 86 (334)
-.+|+.|.++.+. |+++= +- ....+.+|- .+.|+ +.++.....++.+.+.|.|+||-+-+++++-+..+..-
T Consensus 22 GrMG~~i~~~~~~~~~elv~~id~~~~~~l~~~D-VvIDF--T~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~ 98 (228)
T 1vm6_A 22 GRMGQEIQKVFSEKGHELVLKVDVNGVEELDSPD-VVIDF--SSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLREL 98 (228)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEETTEEEECSCCS-EEEEC--SCGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCEEEEEEcCCCcccccCCC-EEEEC--CCHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHH
Confidence 4699988887644 65443 11 112334555 44455 56677888899999999999999989998876665532
Q ss_pred ccCCcceEEEEeccCcccc---hhhHHHHHHhHc
Q 019867 87 FTCTTEKVCIIKAAGLAED---RKAIMEDLAILT 117 (334)
Q Consensus 87 ~~~g~~~v~aVk~p~~g~~---r~~~Ledia~~t 117 (334)
. . ++-+|.+|-|+-- -...++..|...
T Consensus 99 a--~--~~~vv~apNfSlGvnll~~l~~~aA~~l 128 (228)
T 1vm6_A 99 S--K--EVPVVQAYNFSIGINVLKRFLSELVKVL 128 (228)
T ss_dssp T--T--TSEEEECSCCCHHHHHHHHHHHHHHHHT
T ss_pred H--h--hCCEEEeccccHHHHHHHHHHHHHHHhc
Confidence 1 1 2566788866542 123456666666
No 58
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=20.47 E-value=69 Score=28.65 Aligned_cols=46 Identities=15% Similarity=0.093 Sum_probs=34.0
Q ss_pred eEEeecCeEEEeeccCCCChH-----HHHHHhhHHHHhCCcE--EEEeccccc
Q 019867 32 TIFVLDGALVLIYDTKISNSN-----VIRQASLPCMMQGQSL--LVVAEDVEN 77 (334)
Q Consensus 32 ~~~~l~~p~Ill~d~~i~~~~-----~i~~~le~i~~~~~~l--lIia~~i~~ 77 (334)
.+.-+.+|.+|++|.+.+..+ .+..+|....+.|..+ +++.-+.+.
T Consensus 173 AraL~~~p~lLlLDEPts~LD~~~~~~l~~~l~~l~~~g~tv~~iivtHd~~~ 225 (279)
T 2ihy_A 173 ARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEE 225 (279)
T ss_dssp HHHHHTCCSEEEEESTTTTCCHHHHHHHHHHHHHHHHHCTTCEEEEEESCGGG
T ss_pred HHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHHHCCCEEEEEEEecCHHH
Confidence 355678999999999876653 4666777776668888 888776543
Done!