BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019868
(334 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GET|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
pdb|3GET|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Np_281508.1) From Campylobacter Jejuni
At 2.01 A Resolution
Length = 365
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 133/255 (52%), Gaps = 17/255 (6%)
Query: 71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP 129
L L Y+P EV++ + G K +++K+ +NENP+G PP+ E L Q ++YPD
Sbjct: 8 LNNLSNYEPGKDIEVIAKEYGVK--EVIKLASNENPFGTPPKAIECLRQNANKAHLYPDD 65
Query: 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV 189
L++ LA+ +++++I++G G+D++I+ + L+ + + TF YE A
Sbjct: 66 SXIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSKLNSKNAFLQAGVTFAXYEIYAKQ 125
Query: 190 NGAAVVKVPRKSDFSLNVELIADAVEREKP--KCIFLTSPNNPDGSIINDED---LLKIL 244
GA K + + N++ E K K IFL PNNP G ++ + +K +
Sbjct: 126 CGA---KCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEATEFIKGV 182
Query: 245 EMPILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298
LVV+D AY EF+ + E +K+ DN++ L TFS GL GLR+GYG
Sbjct: 183 NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSXLYGLGGLRIGYGIAN 242
Query: 299 LSIIEYLWRAKQPYN 313
+II ++ + P+N
Sbjct: 243 ANIISAFYKLRAPFN 257
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 127/252 (50%), Gaps = 9/252 (3%)
Query: 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY-IY 126
+ L L Y+P E + +LG I K+ +NENP G +V IY
Sbjct: 7 KKSLAGLSSYKPGKREEEVXAELGLTK--ITKLSSNENPLGTSKKVAAIQANSSVETEIY 64
Query: 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
PD + LR +A LE + ++ G DELI+L+ R +LD V PTF Y +
Sbjct: 65 PDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQN 124
Query: 187 AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILE- 245
A + GA V ++P D ++E +A++ EK +++ +PNNP G+ I D+ L+
Sbjct: 125 ALIEGAEVREIPLLQDGEHDLEGXLNAID-EKTTIVWICNPNNPTGNYIELADIQAFLDR 183
Query: 246 --MPILVVLDEAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
+LVVLDEAY E+ E + V+ + NLI+ RTFSK GLA RVGYG I
Sbjct: 184 VPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEI 243
Query: 302 IEYLWRAKQPYN 313
I L + P+N
Sbjct: 244 IRQLNIVRPPFN 255
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 20/256 (7%)
Query: 61 LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
+T R ++R L PYQ + +LG + V ++ANE P V L Q
Sbjct: 4 VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
YP+ + + + A+ +G++ + +LV GADE I+L++R +PG D I+ CPPT
Sbjct: 51 TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
+ MY A G VP ++ L+++ I+D ++ K +++ SPNNP G +IN +D
Sbjct: 110 YGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
+LE+ +VV DEAY EF S W+ ++ +L +LRT SK LAGLR G+
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPY 312
+I L + PY
Sbjct: 228 ANEEVINLLMKVIAPY 243
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 20/256 (7%)
Query: 61 LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL 120
+T R ++R L PYQ + +LG + V ++ANE P V L Q
Sbjct: 4 VTITDLARENVRNLTPYQS-------ARRLGGNGD--VWLNANEYPTA----VEFQLTQQ 50
Query: 121 KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPT 179
YP+ + + + A+ +G++ + +LV GADE I+L++R +PG D I+ CPPT
Sbjct: 51 TLNR-YPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT 109
Query: 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239
+ Y A G VP ++ L+++ I+D ++ K +++ SPNNP G +IN +D
Sbjct: 110 YGXYSVSAETIGVECRTVPTLDNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQD 167
Query: 240 LLKILEMP---ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
+LE+ +VV DEAY EF S W+ ++ +L +LRT SK LAGLR G+
Sbjct: 168 FRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTL 227
Query: 297 FPLSIIEYLWRAKQPY 312
+I L + PY
Sbjct: 228 ANEEVINLLXKVIAPY 243
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 115/228 (50%), Gaps = 14/228 (6%)
Query: 97 IVKIDANENPYGPPPEVREAL----GQLKFPYIYPDPESRRLRAALAKDSGLESD-HILV 151
+VK+DA ENPY PP +R L G++ YP P S LRA L + + + +L+
Sbjct: 32 LVKLDAXENPYRLPPALRSELAARLGEVALNR-YPVPSSEALRAKLKEVXQVPAGXEVLL 90
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
G G+DE+I + PG K+ P F Y A G V VP ++DF+L+
Sbjct: 91 GNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLEFVGVPLRADFTLDRGAXL 150
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP------ILVVLDEAYTEFSGLESR 265
A +P ++L PNNP G++ + D I+ LVV+DEAY F+ ES
Sbjct: 151 AAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQPFAQ-ESW 209
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
+ NL+V RT SK GLAG+R+GY A +E L + + PYN
Sbjct: 210 XSRLTDFGNLLVXRTVSKL-GLAGIRLGYVAGDPQWLEQLDKVRPPYN 256
>pdb|3HDO|A Chain A, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
pdb|3HDO|B Chain B, Crystal Structure Of A Histidinol-Phosphate
Aminotransferase From Geobacter Metallireducens
Length = 360
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 123/251 (49%), Gaps = 15/251 (5%)
Query: 91 GRKPEDI---VKIDANENPYGPPPEVREALGQLKFP-----YIYPDPESRRLRAALAKDS 142
G +P DI +K++ NENPY P PEV +A+ + P IYP S++LR +
Sbjct: 19 GYQPPDIASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELY 78
Query: 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202
G + I+ G+DE+++ ++R G++I P+++ Y A V GA V D
Sbjct: 79 GFDPSWIIXANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGD 138
Query: 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYTEFSG 261
F IA ER + K FLT+PN P G E + ++ +VLDE Y EF+
Sbjct: 139 FR-----IAGFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGXLVLDETYAEFAE 193
Query: 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNXXXXXXXX 321
+ +E V++H+N++V RT SK LAG R+G +I L + + YN
Sbjct: 194 -SNALELVRRHENVVVTRTLSKSYSLAGXRIGLAIARPEVIAALDKIRDHYNLDRLAQAA 252
Query: 322 XXXXLQNPIYL 332
L++ YL
Sbjct: 253 CVAALRDQAYL 263
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 17/217 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
NENP+ P ++ + + + L+ Y PD E + L +++ VG GAD
Sbjct: 27 NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
E+I ++M D+ V PPT++ Y A GA ++VP D + V
Sbjct: 87 EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 136
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
+ +F+ +PNNP G + E++ +IL+ V LDEAY EF G ES ++++KK++NL
Sbjct: 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
V+RTFSK LA RVGY I+ R + P+N
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN 232
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 17/217 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
NENP+ P ++ + + + L+ Y PD E + L +++ VG GAD
Sbjct: 39 NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 98
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
E+I ++M D+ V PPT++ Y A GA ++VP D + V
Sbjct: 99 EIIYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 148
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
+ +F+ +PNNP G + E++ +IL+ V LDEAY EF G ES ++++KK++NL
Sbjct: 149 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 207
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
V+RTFSK LA RVGY I+ R + P+N
Sbjct: 208 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN 244
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 103 NENPYGPPPEVREALGQ------LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
NENP+ P ++ + + + L+ Y PD E + L +++ VG GAD
Sbjct: 27 NENPFPFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGAD 86
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
E+I + D+ V PPT++ Y A GA ++VP D + V
Sbjct: 87 EIIYVXXLXF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRI------PEVNV 136
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLI 276
+ +F+ +PNNP G + E++ +IL+ V LDEAY EF G ES ++++KK++NL
Sbjct: 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHG-ESYVDFLKKYENLA 195
Query: 277 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
V+RTFSK LA RVGY I+ R + P+N
Sbjct: 196 VIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFN 232
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 122/230 (53%), Gaps = 15/230 (6%)
Query: 98 VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGL--E 145
++++ NENPY PP E A I YP+ ++ LR LA K +G+
Sbjct: 33 IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
D++ G++E++ +++ PG + P+++M+ A + V R +DF +
Sbjct: 92 RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
++++ + + ++P +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
++K+ L+V RT SK AG R+GY + I+ + + PY+
Sbjct: 212 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYH 261
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 122/230 (53%), Gaps = 15/230 (6%)
Query: 98 VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGL--E 145
++++ NENPY PP E A I YP+ ++ LR LA K +G+
Sbjct: 30 IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 88
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
D++ G++E++ +++ PG + P+++M+ A + V R +DF +
Sbjct: 89 RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 148
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
++++ + + ++P +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS S
Sbjct: 149 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 208
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
++K+ L+V RT SK AG R+GY + I+ + + PY+
Sbjct: 209 ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYH 258
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 121/230 (52%), Gaps = 15/230 (6%)
Query: 98 VKIDANENPYGPPPEVREALGQLKFPYI------YPDPESRRLRAALA----KDSGL--E 145
++++ NENPY PP E A I YP+ ++ LR LA K +G+
Sbjct: 33 IRLNTNENPY-PPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVT 91
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
D++ G++E++ +++ PG + P+++M+ A + V R +DF +
Sbjct: 92 RDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRI 151
Query: 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLES 264
++++ + + ++P +F+T+PNNP G + + +D+ +I+ + P +V++DEAY EFS S
Sbjct: 152 DMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPS 211
Query: 265 RMEWVKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
++K+ L+V RT S AG R+GY + I+ + + PY+
Sbjct: 212 ATTLLEKYPTKLVVSRTMSXAFDFAGGRLGYFVANPAFIDAVMLVRLPYH 261
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 120/249 (48%), Gaps = 14/249 (5%)
Query: 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILV 151
K +++ +N NP G P + + +K +YPD RRL ++ L+ I++
Sbjct: 24 KGRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDVNYRRLNKSIENYLKLKDIGIVL 83
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIA 211
G GA E+I+L + +KI+ P++ YE +A +G +VV + ++ E I
Sbjct: 84 GNGASEIIELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYEDII 139
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAYTEFSG--LESR 265
+ + + + +PNNP+G +IN E + +L E +++DEA+ EF+G S
Sbjct: 140 SKI--DDVDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSF 197
Query: 266 MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNXXXXXXXXXXX 324
+ +K + L ++R +K + G+R GYG I +AKQ P+N
Sbjct: 198 VGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNPWNINCFAEMAAIN 257
Query: 325 XLQNPIYLE 333
L++ Y+E
Sbjct: 258 CLKDTNYIE 266
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84 EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
++ I G K D++ + E + P ++E + + P+ LR A+A
Sbjct: 16 KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 73
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
K +G+E+D I+V GA++ + + L G++++ P F Y + G
Sbjct: 74 KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 133
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
V+VP + +F LNV+ + V +K + + + SP NP G+++ +DL +I +E
Sbjct: 134 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 192
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
++V+ DE Y F ++R + D + I + FSK + G R+G+ A P IIE
Sbjct: 193 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 252
Query: 304 YLWRAKQPYN 313
+ + Q YN
Sbjct: 253 RMVKF-QMYN 261
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 24/250 (9%)
Query: 84 EVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIYPDPESRRLRAALA- 139
++ I G K D++ + E + P ++E + + P+ LR A+A
Sbjct: 17 KLFDIAAGMK--DVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAE 74
Query: 140 ---KDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
K +G+E+D I+V GA++ + + L G++++ P F Y + G
Sbjct: 75 KLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGK 134
Query: 194 VVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMP 247
V+VP + +F LNV+ + V +K + + + SP NP G+++ +DL +I +E
Sbjct: 135 PVEVPTYEEDEFRLNVDELKKYV-TDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHD 193
Query: 248 ILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
++V+ DE Y F ++R + D + I + FSK + G R+G+ A P IIE
Sbjct: 194 LIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIE 253
Query: 304 YLWRAKQPYN 313
+ + Q YN
Sbjct: 254 RMVKF-QMYN 262
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 12/213 (5%)
Query: 90 LGRKPEDIVKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDH 148
LG P+ ++ AN NP G P V+ AL L YPD + L ALA+ + +
Sbjct: 19 LGISPDQLLDFSANINPLGMPVSVKRALIDNLDCIERYPDADYFHLHQALARHHQVPASW 78
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-RKSDFSLNV 207
IL G G E I + L P ++ P F Y A +G + + R++D
Sbjct: 79 ILAGNGETESI-FTVASGLKPRRAMI-VTPGFAEYGRALAQSGCEIRRWSLREADGWQLT 136
Query: 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL-----EMPILVVLDEAYTEFSGL 262
+ I +A+ + C+FL +PNNP G ++ + LL+ + + I ++LDEA+ +F
Sbjct: 137 DAILEALTPDL-DCLFLCTPNNPTG-LLPERPLLQAIADRCKSLNINLILDEAFIDFIPH 194
Query: 263 ESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
E+ + +K + ++ VLR+ +K + GLR+GY
Sbjct: 195 ETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGY 227
>pdb|3LY1|A Chain A, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|B Chain B, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|C Chain C, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
pdb|3LY1|D Chain D, Crystal Structure Of Putative Histidinol-Phosphate
Aminotransferase (Yp_050345.1) From Erwinia Carotovora
Atroseptica Scri1043 At 1.80 A Resolution
Length = 354
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 98 VKIDANENPYGPPPEVREAL-GQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGAD 156
++I+ NENP G P+ + A + Y E L LA +E+ IL+ G+
Sbjct: 19 IRINFNENPLGXSPKAQAAARDAVVKANRYAKNEILXLGNKLAAHHQVEAPSILLTAGSS 78
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216
E I + ++V T+ E A + G V KV +++ ++E + AV
Sbjct: 79 EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGXKVTKVKXLDNWAFDIEGLKAAVAA 138
Query: 217 -EKPKCIFLTSPNNPDGSIINDEDLLK--ILEMP--ILVVLDEAYTEFSGLESRMEWV-- 269
P ++L +PNNP G+I D+++ I P ++DEAY EF + R +
Sbjct: 139 YSGPSIVYLVNPNNPTGTI-TPADVIEPWIASKPANTXFIVDEAYAEFVN-DPRFRSISP 196
Query: 270 ---KKHDNLIVLRTFSKRAGLAGLRVGYG 295
+ +N+I+L+TFSK AG RVGY
Sbjct: 197 XITQGAENIILLKTFSKIHAXAGXRVGYA 225
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 25/240 (10%)
Query: 76 PYQPILPFEVLSIQLGRKPEDIVKIDANENPY-GPPPEVREALGQLKFPYI-YPDPES-R 132
P + + + L +K ED++ + A E + P P V EA+ L+ + Y DP
Sbjct: 22 PISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAVRFLQKGEVKYTDPRGIY 81
Query: 133 RLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY--E 184
LR +AK G + D ++V GA + + +LDPGD+++ P + Y +
Sbjct: 82 ELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQ 141
Query: 185 FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244
A VV+ +F ++E + + + K K + + SPNNP G + E L ++
Sbjct: 142 IILAGGTVNVVETFMSKNFQPSLEEV-EGLLVGKTKAVLINSPNNPTGVVYRREFLEGLV 200
Query: 245 EMP----ILVVLDEAY------TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
+ ++ DE Y EF+ + ++ + D ++ + FSK + G RVGY
Sbjct: 201 RLAKKRNFYIISDEVYDSLVYTDEFTSI---LDVSEGFDRIVYINGFSKSHSMTGWRVGY 257
>pdb|3FKD|A Chain A, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|B Chain B, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|C Chain C, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
pdb|3FKD|D Chain D, The Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Porphyromonas Gingivalis
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF 185
YP+P++ LR LAK + ++++ ILV G I + G + + P+F YE
Sbjct: 47 YPEPDAGTLRQXLAKRNSVDNNAILVTNGPTAAFYQIAQAF--RGSRSLIAIPSFAEYED 104
Query: 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL- 244
V P D I +A C +L +PNNPDG ++ ++L++L
Sbjct: 105 ACRXYEHEVCFYPSNED-------IGEADFSNXDFC-WLCNPNNPDGRLLQRTEILRLLN 156
Query: 245 EMP-ILVVLDEAYTEFSGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
+ P VLD++Y F+ E R +K NL+ + +FS G+ GLR+GY
Sbjct: 157 DHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVXVYSFSHAYGIPGLRIGY 208
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 67 IRSHLRKLKPYQPILPFEV--LSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
+R R+++ +P P V +++L R+ D+V + A E + P V+EA L Q
Sbjct: 1 MRGLSRRVQAMKPDAPVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
K Y P PE LR ALA +++GL + +V G + + + + +LDPGD+
Sbjct: 61 KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
++ P + Y G VV+V + F + E + A+ + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
G++ E L + +E +V DE Y + G V L V +K
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
+ G R+GY P +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 27/261 (10%)
Query: 67 IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
+R R+++ +P ++ +++L R+ D+V + A E + P V+EA L Q
Sbjct: 1 MRGLSRRVQAMKPDAVVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
K Y P PE LR ALA +++GL + +V G + + + + +LDPGD+
Sbjct: 61 KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
++ P + Y G VV+V + F + E + A+ + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
G++ E L + +E +V DE Y + G V L V +K
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
+ G R+GY P +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 135 RAALAK------DSGLESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDA 187
RAA+A+ + +D++ GA + + R + D D+ + P F Y+
Sbjct: 82 RAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFV 141
Query: 188 AVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246
GA +V+VP ++ F ++ + + + + + + + SPNNP G++ ++E + K+ ++
Sbjct: 142 NAAGARLVEVPADTEHFQIDFDALEERINAH-TRGVIINSPNNPSGTVYSEETIKKLSDL 200
Query: 247 ----------PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGY 294
PI ++ DE Y E ++ +V K +DN +V ++SK L G R+GY
Sbjct: 201 LEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGY 259
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67 IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
+R R+++ +P + +++L R+ D+V + A E + P V+EA L Q
Sbjct: 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
K Y P PE LR ALA +++GL + +V G + + + + +LDPGD+
Sbjct: 61 KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
++ P + Y G VV+V + F + E + A+ + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
G++ E L + + + +V DE Y + G V L V +K
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
+ G R+GY P +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67 IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
+R R+++ +P + +++L R+ D+V + A E + P V+EA L Q
Sbjct: 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
K Y P PE LR ALA +++GL + +V G + + + + +LDPGD+
Sbjct: 61 KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
++ P + Y G VV+V + F + E + A+ + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
G++ E L + + + +V DE Y + G V L V +K
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
+ G R+GY P +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 106 PYGPPP-----EVREALG---QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157
P PPP VR ALG Q P P LR ALA++ +E + ++V GA E
Sbjct: 35 PSNPPPPFLLEAVRRALGRQDQYAPPAGLPA-----LREALAEEFAVEPESVVVTSGATE 89
Query: 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP---RKSDFSLNVELIADAV 214
+ ++++ ++ PGD++V P F +Y DA + GA V F L++ + A+
Sbjct: 90 ALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEKAL 149
Query: 215 EREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE-FSGLESRMEWV 269
+ + + L +P NP G + + +L I + + ++ DE Y E + G R
Sbjct: 150 T-PRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLRE 208
Query: 270 KKHDNLIVLRTFSKRAGLAGLRVGY 294
+ + + KR G RVG+
Sbjct: 209 FAPERTFTVGSAGKRLEATGYRVGW 233
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 27/261 (10%)
Query: 67 IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
+R R+++ +P + +++L R+ D+V + A E + P V+EA L Q
Sbjct: 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
K Y P PE LR ALA +++GL + +V G + + + + +LDPGD+
Sbjct: 61 KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
++ P + Y G VV+V + F + E + A+ + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKILEMPI----LVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
G++ E L + + + +V DE Y + G V L V +K
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAKA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
+ G R+GY P +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 92 RKPEDIVKIDANENPYGPPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLES 146
R V + NENP P V+ A+ ++P+ D E R R LA+
Sbjct: 13 RAAAQAVCLAFNENPEAVEPRVQAAIAAAAARINRYPF---DAEPRVXRK-LAEHFSCPE 68
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
D++ + G DE D I + V P F Y AV+G ++ D L+
Sbjct: 69 DNLXLVRGIDECFDRI--SAEFSSXRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLD 126
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRM 266
+A + C+ L +P+NP G ++ +L ++ + +++DE Y ++S +R
Sbjct: 127 PNDLAQV---SRDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRAR- 182
Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVG 293
+ +N +V R+FSK GLAGLR+G
Sbjct: 183 -GLAYGENELVFRSFSKSYGLAGLRLG 208
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 27/261 (10%)
Query: 67 IRSHLRKLKPYQP--ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----LGQL 120
+R R+++ +P + +++L R+ D+V + A E + P V+EA L Q
Sbjct: 1 MRGLSRRVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPDFDTPEHVKEAARRALAQG 60
Query: 121 KFPYIYPD--PESRRLRAALA----KDSGLES--DHILVGCGADELIDLIMRCVLDPGDK 172
K Y P PE LR ALA +++GL + +V G + + + + +LDPGD+
Sbjct: 61 KTKYAPPAGIPE---LREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDE 117
Query: 173 IVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNP 230
++ P + Y G VV+V + F + E + A+ + K + + SPNNP
Sbjct: 118 VIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAIT-PRTKALVVNSPNNP 176
Query: 231 DGSIINDEDLLKI----LEMPILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKR 284
G++ E L + +E +V DE Y + G V L V +
Sbjct: 177 TGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTV-NGAAXA 235
Query: 285 AGLAGLRVGYGAFPLSIIEYL 305
+ G R+GY P +I+ +
Sbjct: 236 FAMTGWRIGYACGPKEVIKAM 256
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 96 DIVKIDANENPYGPPPEVREA----LGQLKFPYIYPDPESRRLRAALA----KDSGL--E 145
D+ A E + P + EA L Q K Y P RLR A+A +D+GL
Sbjct: 31 DVCSFSAGEPDFNTPKHIVEAAKAALEQGKTRY-GPAAGEPRLREAIAQKLQRDNGLCYG 89
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFDAAVNGAAVV-KVPRKSDF 203
+D+ILV G + I +M +++PGD+++ P + Y E G V+ ++ F
Sbjct: 90 ADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQF 149
Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTEF 259
++ E I A+ K K + +P+NP G + +++ I +E + V+ DE Y +
Sbjct: 150 KVSPEQIRQAI-TPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKI 208
Query: 260 -----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303
L + ++ +V F+K + G RVG+ A P+ +++
Sbjct: 209 LYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVK 257
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206
+++LV G E I + +PGD+I+ P + Y A + G ++ V R+ +
Sbjct: 103 ENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRXEEGFA 162
Query: 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE--FS 260
+ ++ E+ K I L++P NP G + ++ ++E+ + +++DE Y+E F
Sbjct: 163 IPQNLESFINERTKGIVLSNPCNPTGVVYGKDEXRYLVEIAERHGLFLIVDEVYSEIVFR 222
Query: 261 GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
G E + D ++V+ + S + G RVG
Sbjct: 223 G-EFASALSIESDKVVVIDSVSXKFSACGARVG 254
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 134 LRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA 193
LRA +A+ G+ + +L+ G+ + +DL+ + LD G ++ P++ + G
Sbjct: 79 LRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPR 138
Query: 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSII----NDEDLLKILEMPI 248
+ VP + +++ + + ++RE+P+ ++L S NP G + L ++E +
Sbjct: 139 FLTVPAGEE-GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGL 197
Query: 249 LVVLDEAYTEFSGLESRM----EWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
+VV D+AY E E+R+ E ++ + +I L +FSK GLRV + +
Sbjct: 198 VVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPEAL 256
Query: 303 EYLWRAKQ 310
+ L +AKQ
Sbjct: 257 QKLVQAKQ 264
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 27/268 (10%)
Query: 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGP-PPEVREAL---GQLKFPY 124
+ + +L PY + E L + R+ EDI+ + NP GP PP + E L Q + +
Sbjct: 12 ARIDRLPPYVFNITAE-LKMAARRRGEDIIDLSMG-NPDGPTPPHIVEKLCTVAQREDTH 69
Query: 125 IYPDPESR-RLRAALAK------DSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIVDC 176
Y RLR A++ D ++ +V G+ E + +M LD GD I+
Sbjct: 70 GYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVP 129
Query: 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE---KPKCIFLTSPNNPDGS 233
P++ ++ + A + GA V VP EL + RE KP+ + L P+NP
Sbjct: 130 NPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNEL--ERAIRESIPKPRMMILGFPSNPTAQ 187
Query: 234 IINDEDLLKILEMP----ILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFSKRA 285
+ + +++ + ++VV D AY + + G + S M+ D + T SK
Sbjct: 188 CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY 247
Query: 286 GLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
+AG R+G+ ++ L R K ++
Sbjct: 248 NMAGWRIGFMVGNPELVSALARIKSYHD 275
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 117/259 (45%), Gaps = 39/259 (15%)
Query: 71 LRKLKPYQPILPFEVL--SIQLGRKPE--DIVKIDANENPYGPPPEVREALGQL-----K 121
L++LKPY PF L + Q PE + V + E + P + +AL K
Sbjct: 6 LKQLKPY----PFARLHEAXQGISAPEGXEAVPLHIGEPKHPTPKVITDALTASLHELEK 61
Query: 122 FPYIYPDPESRRLRAALAKD--SGLESD---HILVGCGADELIDLIMRCVLDP---GDK- 172
+P PE R+ A K GL D IL G+ E + ++ VL+P G K
Sbjct: 62 YPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKP 121
Query: 173 -IVDCPPTFTMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNN 229
IV P + +YE + G + P S F+ + I++ V + + K +F+ SPNN
Sbjct: 122 AIVSPNPFYQIYEGATLLGGGEIHFANCPAPS-FNPDWRSISEEVWK-RTKLVFVCSPNN 179
Query: 230 PDGSIINDEDLLKILEMP----ILVVLDEAYTE--FSG------LESRMEWVKKHDNLIV 277
P GS+++ + ++ ++ ++ DE Y+E F G L++ + + L+
Sbjct: 180 PSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLX 239
Query: 278 LRTFSKRAGLAGLRVGYGA 296
+ S R+ + GLR G+ A
Sbjct: 240 FTSLSXRSNVPGLRSGFVA 258
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
P L L K G+ D+ I++ G+ + +DLI R L+PGD +V PT F
Sbjct: 122 PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 181
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
YE +++P D + VE++ + ++ K + + T P NP G
Sbjct: 182 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 233
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
+N++ +LE+ +VV D+ Y E +SG E +++ + +I L TFSK
Sbjct: 234 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 292
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
G R+G+ II + AKQ
Sbjct: 293 PGFRIGWMVGDPGIIRKMEIAKQ 315
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 132 RRLRAALAKDS----GLESDH---ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE 184
+ LR A+A+ + G + D I V GA E + + ++ GD+++ P++ Y
Sbjct: 70 QALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA 129
Query: 185 FDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243
A++G V ++ + F ++ + A A+ E+ + + L +P+NP ++ D +
Sbjct: 130 PAIALSGGIVKRMALQPPHFRVDWQEFA-ALLSERTRLVILNTPHNPSATVWQQADFAAL 188
Query: 244 LEM----PILVVLDEAYTEFSGLESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYG 295
+ I V+ DE Y + + V H L + + +F K + G +VGY
Sbjct: 189 WQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYC 248
Query: 296 AFPLSI 301
P I
Sbjct: 249 VAPAPI 254
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 129 PESRRLRAALAKDSGLESDH-ILVGCGADELIDLIMRCVLDPGDKIVDCPPT-------F 180
P L L K G+ D+ I++ G+ + +DLI R L+PGD +V PT F
Sbjct: 77 PLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAF 136
Query: 181 TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKC----IFLTSPN--NPDGSI 234
YE +++P D + VE++ + ++ K + + T P NP G
Sbjct: 137 NFYE-------PQYIQIPL-DDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT 188
Query: 235 INDEDLLKILEMP----ILVVLDEAYTE--FSGL-ESRMEWVKKHDNLIVLRTFSKRAGL 287
+N++ +LE+ +VV D+ Y E +SG E +++ + +I L TFSK
Sbjct: 189 MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA- 247
Query: 288 AGLRVGYGAFPLSIIEYLWRAKQ 310
G R+G+ II + AKQ
Sbjct: 248 PGFRIGWMVGDPGIIRKMEIAKQ 270
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 12/173 (6%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
+LV GA E I + +++PG +++ P + Y A+ GA V VP D
Sbjct: 89 VLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPD-GRGFA 147
Query: 209 LIADAVERE---KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSG 261
L ADA+ R + + + + SP+NP G++++ +L I E+ ++V+ DE Y
Sbjct: 148 LDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVF 207
Query: 262 LESRMEWVKKHDNL----IVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
+R + D + I + + + G ++G+ P +I + AKQ
Sbjct: 208 DHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGWACGPAELIAGVRAAKQ 260
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSDFS 204
D + V E + LI +LDPGD+I+ P++ Y G V + + D+
Sbjct: 102 DDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQ 161
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL----EMPILVVLDEAY--TE 258
+++ I + ++ K I + +PNNP G++ + + L +IL E I V+ DE Y
Sbjct: 162 PDIDDIRKKI-TDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMT 220
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297
+ G + K +IV+ SK G R+GY F
Sbjct: 221 YEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 107 YGPPP-EVREALGQLKFPYIYPDPESR---RLRAALAK------DSGLESDHILVGCGAD 156
Y PP ++EA L P + +R L +L K ++ L+++++ V GA+
Sbjct: 69 YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128
Query: 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP------------RKSDFS 204
E I + +L+ GD+++ P F Y + + G VV VP R +++
Sbjct: 129 EGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI----LEMPILVVLDEAYTE-- 258
++ E A+ K K + + +P+NP G + E+L + ++ ++++ DE Y
Sbjct: 189 IDFEQFEKAI-TSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLY 247
Query: 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLA--GLRVGY 294
F+ +R+ + + L S A G R+G+
Sbjct: 248 FTDSFTRIATLSPEIGQLTLTVGSAGXSFAATGWRIGW 285
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 24/245 (9%)
Query: 83 FEVLSI-----QLGRKPEDIVKIDANENPYGPP-PEVREALGQLKFPYI-YPDP----ES 131
FEV+ I +L + + ++ ++ E + P P V E + LK Y D E
Sbjct: 12 FEVMDILALAQKLESEGKKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTDSRGILEL 71
Query: 132 RRLRAALAKD---SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA 188
R + L KD + + D+I++ G+ + + ++D GD+++ P + Y+
Sbjct: 72 REKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIR 131
Query: 189 VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI 248
GA P DF+ VE + +A+ +K K I + SP+NP G +I+ E E
Sbjct: 132 FLGAK----PVFCDFT--VESLEEAL-SDKTKAIIINSPSNPLGEVIDREIYEFAYENIP 184
Query: 249 LVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305
++ DE Y S +E+ + + I++ FS + G R+GY IIE +
Sbjct: 185 YIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGWRIGYVISNDEIIEAI 244
Query: 306 WRAKQ 310
+ +Q
Sbjct: 245 LKLQQ 249
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 109/235 (46%), Gaps = 36/235 (15%)
Query: 109 PPPEV--REALGQLKFPYIYPDPES-------------RRLRAALAKDSGLES--DHILV 151
P PE+ R LG++ + +P+S L A L K LE ++I++
Sbjct: 44 PDPELIPRAVLGEIAKEVLEKEPKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVI 103
Query: 152 GCGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSDFSLNVEL 209
G +DL+ R ++DPGD ++ P++ T+ F+ GA + VP +D + V+L
Sbjct: 104 TIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQL--GAKIEGVPVDND-GMRVDL 160
Query: 210 IADAVER-----EKPKCIF-LTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF 259
+ + ++ +K K I+ + + NP G ++ E +LE+ +L++ D AY
Sbjct: 161 LEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFM 220
Query: 260 SGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311
+ +K DN +IV T SK G G R+G+ I++ + KQP
Sbjct: 221 RYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIGWIIAEGEILKKVLMQKQP 274
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV---KVPRK 200
LE+ +++ G + IDL + + +PG I+ P F++Y+ A G V +P K
Sbjct: 116 LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEK 175
Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
S + ++++ + ++ EK C+ + +P+NP GS+ + L KIL + + ++ DE Y
Sbjct: 176 S-WEIDLKQLEYLID-EKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIY 233
Query: 257 TEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
+ + + E + ++ +KR + G R+G+
Sbjct: 234 GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGW 274
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 119 QLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP 178
+L + +I P ++ + L +G++ + IL GA L++ +++PGD ++ P
Sbjct: 56 KLNYGWIEGSPAFKKSVSQLY--TGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYP 113
Query: 179 TF-TMYEFDAAVNGAAV--VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235
T+ +Y+ ++ GA V ++ ++ + ++E + + R K I + + NNP G++
Sbjct: 114 TYQQLYDIPKSL-GAEVDLWQIEEENGWLPDLEKLRQLI-RPTTKXICINNANNPTGAVX 171
Query: 236 ND---EDLLKIL-EMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291
+ E+L++I E+ ++ DE Y FS L+ ++ +D I + + S L G+R
Sbjct: 172 DRTYLEELVEIASEVGAYILSDEVYRSFSELDVP-SIIEVYDKGIAVNSLSXTYSLPGIR 230
Query: 292 VGYGA 296
+G+ A
Sbjct: 231 IGWVA 235
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 127 PDPESRRLRAALAKD---SGLESDHILVGCGADELIDLI-MRCVLDPGDKIVDCPPTFTM 182
PD LR L++D +++ I + GA +DL + P + P++
Sbjct: 73 PDFGLPALRQKLSEDFYRGFVDAKEIFISDGAK--VDLFRLLSFFGPNQTVAIQDPSYPA 130
Query: 183 YEFDAAVNGAA-VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241
Y A + GA ++ +P + + E D + L SPNNP G+++N + L
Sbjct: 131 YLDIARLTGAKEIIALPCLQENAFFPEFPEDT----HIDILCLCSPNNPTGTVLNKDQLR 186
Query: 242 KI----LEMPILVVLDEAYTEF----SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
I +E IL++ D AY+ F S +S E I + +FSK G AG+R+G
Sbjct: 187 AIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246
Query: 294 YGAFP 298
+ P
Sbjct: 247 WTVIP 251
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 40/220 (18%)
Query: 99 KIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158
K AN Y PE R+A+ + R+R + + +++ GA
Sbjct: 74 KAIANFQDYHGLPEFRKAIAKF-----MEKTRGGRVR--------FDPERVVMAGGATGA 120
Query: 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE- 217
+ I+ C+ DPGD + P + + D V +P + S N ++ + AV+
Sbjct: 121 NETIIFCLADPGDAFLVPSPYYPAFNRDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAY 179
Query: 218 --------KPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYT-------E 258
K K + LT+P+NP G+ ++ + L +L I +V DE Y +
Sbjct: 180 ENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQ 239
Query: 259 FSGL-----ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
F + E M + K D + ++ + SK GL G RVG
Sbjct: 240 FVSIAEILDEQEMTYCNK-DLVHIVYSLSKDMGLPGFRVG 278
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 22/188 (11%)
Query: 131 SRRLRAALA----KDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD 186
++ LR A+A +D ++S+ + V GA I ++ +L I PTF Y D
Sbjct: 114 NKTLRKAIAETFYRDLHVKSNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAY-ID 171
Query: 187 AAVNGAAVVKVPRKSDFSLNV---------ELIADAVEREKPKCIFLTSPNNPDGSIIND 237
++V K+ NV D + IF SPNNP G + +
Sbjct: 172 SSVIIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDLAMTPRTDVIFFCSPNNPTGYVASR 231
Query: 238 EDLLKILEMP----ILVVLDEAYTEF---SGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290
+ L ++++ +++ D AY F S E + I + +FSK AG G+
Sbjct: 232 KQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFTGV 291
Query: 291 RVGYGAFP 298
R+G+ P
Sbjct: 292 RLGWSIIP 299
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRK 200
LE+ +++ G + I+L + + +PG I+ P F++Y A G V +P K
Sbjct: 93 LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEK 152
Query: 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY 256
S + ++++ + ++ EK C+ + +P+NP GS+ + L KIL + + ++ DE Y
Sbjct: 153 S-WEIDLKQLESLID-EKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIY 210
Query: 257 TEFSGLESRME-WVKKHDNLIVLRT--FSKRAGLAGLRVGY 294
+ + + E N+ +L + R + G R+G+
Sbjct: 211 GDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGW 251
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 9/177 (5%)
Query: 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204
+ D + + G + + CV++PGD ++ P +T Y + V + +
Sbjct: 108 KEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHY 167
Query: 205 LNVELIADAVEREKPKCIFLTSPNNPDGSI----INDEDLLKILEMPILVVLDEAYTEFS 260
L D+ +K K I+LT PNNP GS + DE + K +V D AY F
Sbjct: 168 LPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAF- 226
Query: 261 GLESRMEWVKKHDN----LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
G +++ + +N I + + SK +G RVG+ I+ L + + N
Sbjct: 227 GFDAKNPSILASENGKDVAIEIYSLSKGYNXSGFRVGFAVGNKDXIQALKKYQTHTN 283
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 84/169 (49%), Gaps = 20/169 (11%)
Query: 144 LESDHILVGCGADE-LIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAVNGAAVVKVP--R 199
L+ + ++ G+ E L + + D + + P P + +YE A A + P +
Sbjct: 80 LKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLXPLTK 139
Query: 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEA 255
++DF+ ++ + E ++ + L SPNNP G ++ E+L+ +++ + +++ DE
Sbjct: 140 ENDFTPSL----NEKELQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDEC 195
Query: 256 YTEF-------SGLES-RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296
Y+E S LE+ + + N++V+ + SKR+ GLR G+ A
Sbjct: 196 YSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIA 244
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 38/193 (19%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
++ ILV GA + ++ ++DPGD+++ P + YE + GA V +P +S +
Sbjct: 85 NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
++ + D E E K K I L +P+NP G + ++L I ++ + L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV--KKHDNL------------IVLRTFSKRAGLAGLRVGYGAF 297
DE Y EW+ H ++ I + + K + G ++G+
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQ 310
P +I++L +Q
Sbjct: 255 PAHLIKHLQTVQQ 267
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
IF SPNNP G+ E L +++E ++V D AY + + S E +
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
+FSK AG G+R+G+ P ++
Sbjct: 262 AXETASFSKYAGFTGVRLGWTVIPKKLL 289
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
IF SPNNP G+ E L +++E ++V D AY + + S E +
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
+ +FSK AG G+R+G+ P ++
Sbjct: 262 AMETASFSKYAGFTGVRLGWTVIPKKLL 289
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 83/193 (43%), Gaps = 38/193 (19%)
Query: 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL 205
++ ILV GA + ++ ++DPGD+++ P + YE + GA V +P +S +
Sbjct: 85 NEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTD 144
Query: 206 NVELIA-----DAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEMPI----LVV 251
++ + D E E K K I L +P+NP G + ++L I ++ + L +
Sbjct: 145 GMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCI 204
Query: 252 LDEAYTEFSGLESRMEWV----KKHDNLIVLRTFSKRA----------GLAGLRVGYGAF 297
DE Y EW+ H + L +R + G ++G+
Sbjct: 205 SDEVY----------EWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSIG 254
Query: 298 PLSIIEYLWRAKQ 310
P +I++L +Q
Sbjct: 255 PAHLIKHLQTVQQ 267
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSL 205
+H+++ GA + + C+ DPG+ ++ P + ++ D G +V + S
Sbjct: 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 171
Query: 206 NV------ELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254
+ E +A +R + K + +T+P+NP G+ + +L +L I ++ DE
Sbjct: 172 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 231
Query: 255 AY--TEFS--GLESRMEWVKKHD---------NLIVLRTFSKRAGLAGLRVG 293
Y T FS S ME +K + + V+ + SK GL G RVG
Sbjct: 232 IYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-------- 200
+LV GA E + ++ +D GD+++ P F YE G +P K
Sbjct: 104 VLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTI 163
Query: 201 --SDFSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLD 253
+D+ L N EL +A+ EK K I + +P+NP G +++ +L + + +L V D
Sbjct: 164 SSADWVLDNNEL--EALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSD 221
Query: 254 EAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307
E Y + E ++ + I + + K L G ++G+ P ++++ L
Sbjct: 222 EVYEHM--VFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM 279
Query: 308 AKQ 310
Q
Sbjct: 280 VHQ 282
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
IF SPNNP G+ E L +++E ++V D AY + + S E +
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
+ +FS+ AG G+R+G+ P ++
Sbjct: 262 AMETASFSQYAGFTGVRLGWTVIPKKLL 289
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSL 205
+H+++ GA + + C+ DPG+ ++ P + ++ D G +V + S
Sbjct: 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 171
Query: 206 NV------ELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254
+ E +A +R + K + +T+P+NP G+ + +L +L I ++ DE
Sbjct: 172 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 231
Query: 255 AY--TEFS--GLESRMEWVKKHD---------NLIVLRTFSKRAGLAGLRVG 293
Y T FS S ME +K + + V+ + SK GL G RVG
Sbjct: 232 IYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 283
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSL 205
+H+++ GA + + C+ DPG+ ++ P + ++ D G +V + S
Sbjct: 95 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 154
Query: 206 NV------ELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254
+ E +A +R + K + +T+P+NP G+ + +L +L I ++ DE
Sbjct: 155 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 214
Query: 255 AY--TEFS--GLESRME------WVKKHDNLIVLRTFSKRAGLAGLRVG 293
Y T FS S ME W + H +V K GL G RVG
Sbjct: 215 IYSGTAFSSPSFISVMEVLKDEVWQRVH---VVYSLSXKDLGLPGFRVG 260
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVPRKSDFSL 205
+H+++ GA + + C+ DPG+ ++ P + ++ D G +V + S
Sbjct: 110 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGF 169
Query: 206 NV------ELIADAVERE-KPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDE 254
+ E +A +R + K + +T+P+NP G+ + +L +L I ++ DE
Sbjct: 170 QITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDE 229
Query: 255 AY--TEFS--GLESRMEWVKKHD---------NLIVLRTFSKRAGLAGLRVG 293
Y T FS S ME +K + + V+ + SK GL G RVG
Sbjct: 230 IYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVG 281
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGLE---SRMEWVKKHDN 274
IF SPNNP G+ E L +++E ++V D AY + + S E +
Sbjct: 202 IFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEV 261
Query: 275 LIVLRTFSKRAGLAGLRVGYGAFPLSII 302
+ +FS AG G+R+G+ P ++
Sbjct: 262 AMETASFSNYAGFTGVRLGWTVIPKKLL 289
>pdb|3BWN|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWN|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWN|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWN|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWN|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDK----IVDCPPTFTMYEFDAAVNGAAVVK 196
++ E +I+VG G+ +L + + +V P ++ Y + + + K
Sbjct: 86 NAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYK 145
Query: 197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI----IN--DEDLLKILEMPILV 250
E A +++ P +TSPNNPDG+I +N D+D K++
Sbjct: 146 W----------EGDAWGFDKKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIH----- 190
Query: 251 VLDEAYT--EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
D AY ++ + ++ D+ I+L TFSK G AG R+G+
Sbjct: 191 --DFAYYWPHYTPI------TRRQDHDIMLFTFSKITGHAGSRIGWA 229
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-------- 200
+LV GA E + ++ +D GD+++ P F YE G +P K
Sbjct: 104 VLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTI 163
Query: 201 --SDFSL-NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLD 253
+D+ L N EL +A+ EK K I + +P+NP G +++ +L + + +L V D
Sbjct: 164 SSADWVLDNNEL--EALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSD 221
Query: 254 EAY 256
E Y
Sbjct: 222 EVY 224
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 42/268 (15%)
Query: 77 YQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----------LGQLKFPYIY 126
Y P + F L+ + D+V + + PP EA L Q + Y
Sbjct: 15 YNPWVEFVKLASE-----HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGY 69
Query: 127 PDPESRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
P P ++ L + + G E D ++LV G + + ++D GD+++ P F Y
Sbjct: 70 P-PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCY 128
Query: 184 EFDAAVNGAAVVKVPRK------------SDFSLN-VELIADAVEREKPKCIFLTSPNNP 230
E + G V V K S++ L+ +EL R K + L +PNNP
Sbjct: 129 EPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTK--ALVLNTPNNP 186
Query: 231 DGSIINDEDLLKILEM----PILVVLDEAYTE--FSGLE--SRMEWVKKHDNLIVLRTFS 282
G + + E+L + + ++ + DE Y + G + S + + + +
Sbjct: 187 LGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAG 246
Query: 283 KRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
K G +VG+ P I+++L Q
Sbjct: 247 KTFSATGWKVGWVLGPDHIMKHLRTVHQ 274
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 134 LRAALAK------DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA 187
LR ALA+ D + I+ G+ + +DLI R L+PGD IV PT+
Sbjct: 88 LRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEAPTYLAAIQAF 147
Query: 188 AVNGAAVVKVPRKSDFSLNVELIADAV-----EREKPKCIFLTSP-NNPDGSIINDEDLL 241
+ +P D + V+L+ + + + ++ K ++ S NP G ++ +
Sbjct: 148 KYYDPEFISIPL-DDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNPAGVTMSVDRRK 206
Query: 242 KILEMP----ILVVLDEAYTEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAGLRVGY 294
K+LE+ L+V D Y+E +K D+ +I L TFSK G R+G+
Sbjct: 207 KLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILA-PGFRIGW 265
Query: 295 GAFPLSIIEYLWRAKQ 310
A +I + AKQ
Sbjct: 266 VAAHPHLIRKMEIAKQ 281
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 77 YQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----------LGQLKFPYIY 126
Y P + F L+ + D+V + + PP EA L Q + Y
Sbjct: 15 YNPWVEFVKLASE-----HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGY 69
Query: 127 PDPESRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
P P ++ L + + G E D ++LV G + + ++D GD+++ P F Y
Sbjct: 70 P-PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCY 128
Query: 184 EFDAAVNGAAVVKVPRK------------SDFSLN-VELIADAVEREKPKCIFLTSPNNP 230
E + G V V K S++ L+ +EL R K + L +PNNP
Sbjct: 129 EPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTK--ALVLNTPNNP 186
Query: 231 DGSIINDEDLLKILEM----PILVVLDEAY 256
G + + E+L + + ++ + DE Y
Sbjct: 187 LGKVFSREELELVASLCQQHDVVCITDEVY 216
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 77 YQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREA----------LGQLKFPYIY 126
Y P + F L+ + D+V + + PP EA L Q + Y
Sbjct: 15 YNPWVEFVKLASE-----HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKTFGY 69
Query: 127 PDPESRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY 183
P P ++ L + + G E D ++LV G + + ++D GD+++ P F Y
Sbjct: 70 P-PLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCY 128
Query: 184 EFDAAVNGAAVVKVPRK------------SDFSLN-VELIADAVEREKPKCIFLTSPNNP 230
E + G V V K S++ L+ +EL R K + L +PNNP
Sbjct: 129 EPMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTK--ALVLNTPNNP 186
Query: 231 DGSIINDEDLLKILEM----PILVVLDEAY 256
G + + E+L + + ++ + DE Y
Sbjct: 187 LGKVFSREELELVASLCQQHDVVCITDEVY 216
>pdb|3BWN|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|A Chain A, L-Tryptophan Aminotransferase
pdb|3BWO|B Chain B, L-Tryptophan Aminotransferase
pdb|3BWO|C Chain C, L-Tryptophan Aminotransferase
pdb|3BWO|D Chain D, L-Tryptophan Aminotransferase
pdb|3BWO|E Chain E, L-Tryptophan Aminotransferase
pdb|3BWO|F Chain F, L-Tryptophan Aminotransferase
Length = 391
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 35/167 (20%)
Query: 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDK----IVDCPPTFTMYEFDAAVNGAAVVK 196
++ E +I+VG G+ +L + + +V P ++ Y + + + K
Sbjct: 86 NAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYK 145
Query: 197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI----IN--DEDLLKILEMPILV 250
E A +++ P +TSPNNPDG+I +N D+D K++
Sbjct: 146 W----------EGDAWGFDKKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIH----- 190
Query: 251 VLDEAYT--EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295
D AY ++ + ++ D+ I+L TFS G AG R+G+
Sbjct: 191 --DFAYYWPHYTPI------TRRQDHDIMLFTFSXITGHAGSRIGWA 229
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 109 PPPEVREALGQLK----FPYIYPDPESRRLRAALAK---DSGLESDHILVGCGADELIDL 161
P PE++EA+ F Y Y + + + + D + + IL G I +
Sbjct: 75 PVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISI 134
Query: 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREK 218
++ + GD ++ P + + +N +V+ + F ++ E + +
Sbjct: 135 ALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNN 194
Query: 219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKK--- 271
K L SP+NP G + +++DL+KI E+ +++V DE + + + + +
Sbjct: 195 VKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDA 254
Query: 272 --HDNLIVLRTFSKRAGLAGLRVGYG 295
D I+L + +K +AG + +
Sbjct: 255 SYKDFTIILSSATKTFNIAGTKNSFA 280
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAY-TEFSGL---ESRMEW 268
E+ I ++ P NP G++I DE+L K+ + I +V+D AY F G+ E+R W
Sbjct: 179 EETGXICVSRPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLW 238
Query: 269 VKKHDNLIVLRTFSKRAGLAGLRVG 293
+ N+I+ + SK GL G R G
Sbjct: 239 ---NPNIILCXSLSK-LGLPGSRCG 259
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213
G+ E + ++ + +P D ++ + Y A V +P + D +++ + +
Sbjct: 95 GSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPLREDGLADLKAVPEG 154
Query: 214 VEREKPKCIFLTSPNNPDGSIIN----DEDLLKILEMPILVVLDEAYTE--FSG-LESRM 266
V RE K + L PNNP G++ + +E L + + ++ D Y + + G S +
Sbjct: 155 VWREA-KVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPL 213
Query: 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGY 294
+ ++ L + SK LAG R+G+
Sbjct: 214 ALPGAKERVVELFSLSKSYNLAGFRLGF 241
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 212 DAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEFSGL----E 263
D + ++ IF SPNNP G+ L +++ ++V D AY + +
Sbjct: 203 DLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPK 262
Query: 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301
+ E + I +FSK AG G+R+G+ P ++
Sbjct: 263 TIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKAL 300
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 82/180 (45%), Gaps = 27/180 (15%)
Query: 146 SDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV--KVPRKSD 202
+D I + GA + L+M+ ++ + D I+ P + +Y A++G A+V + +
Sbjct: 157 ADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTG 216
Query: 203 FSLNVELIADAVEREKPKCI-----FLTSPNNPDGSIINDE---DLLKILEMPILVVL-D 253
+ L + +E + + I + +P NP G ++ +E D++K + LV+L D
Sbjct: 217 WGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLAD 276
Query: 254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313
E Y E ++++ K H ++R+ +GYG L ++ Y +K Y
Sbjct: 277 EVYQENIYVDNK----KFHSFKKIVRS-----------LGYGEEDLPLVSYQSVSKGYYG 321
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP- 219
L + +L GDK+ P FT Y + A+ +V +D SLN + +++ K
Sbjct: 185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP 244
Query: 220 --KCIFLTSPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKK 271
K F +P+NP ++ L ++ + ++++ D+ Y F+ + + +
Sbjct: 245 AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFAD-DFQSLFAIC 303
Query: 272 HDNLIVLRTFSKRAGLAGLRVG 293
+N +++ +FSK G G R+G
Sbjct: 304 PENTLLVYSFSKYFGATGWRLG 325
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP- 219
L + +L GDK+ P FT Y + A+ +V +D SLN + +++ K
Sbjct: 185 LKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDP 244
Query: 220 --KCIFLTSPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKK 271
K F +P+NP ++ L ++ + ++++ D+ Y F+ + + +
Sbjct: 245 AIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFAD-DFQSLFAIC 303
Query: 272 HDNLIVLRTFSKRAGLAGLRVG 293
+N +++ +FSK G G R+G
Sbjct: 304 PENTLLVYSFSKYFGATGWRLG 325
>pdb|2CH1|A Chain A, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH1|B Chain B, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH1|C Chain C, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH1|D Chain D, Structure Of Anopheles Gambiae 3-Hydroxykynurenine
Transaminase
pdb|2CH2|A Chain A, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
pdb|2CH2|B Chain B, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
pdb|2CH2|C Chain C, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
pdb|2CH2|D Chain D, Structure Of The Anopheles Gambiae 3-Hydroxykynurenine
Transaminase In Complex With Inhibitor
Length = 396
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%)
Query: 191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILV 250
GA V + D ++E +A A+E +PKC+FLT ++ G + E + +I +
Sbjct: 116 GADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCL 175
Query: 251 VLDEAYTEFSGLESRME 267
++ +A G+ M+
Sbjct: 176 LIVDAVASLCGVPFYMD 192
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVK---VPRKSDF 203
D + G I +R PGD+I+ P + + NG V+ + S +
Sbjct: 86 DWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEGNGRRVISSDLIYENSKY 145
Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEF 259
S+N + + + + +P+NP G ++E++ +I E+ +L++ DE + +
Sbjct: 146 SVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDL 205
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 100 IDANE-NPYGP---PPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCG 154
ID+ E N Y P PE REA+ + +++ + L++ + KD+ +++ G
Sbjct: 63 IDSQECNGYFPTVGSPEAREAVATWWRNSFVHKE----ELKSTIVKDN------VVLCSG 112
Query: 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAV 214
I + + + D GD + P F YE G + + + +L D +
Sbjct: 113 GSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADL--DEI 170
Query: 215 ER---EKPKCIFLTSPNNPDGSIIND---EDLLKILE 245
R +K K + +T+P+NP GS + ED++++ E
Sbjct: 171 RRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAE 207
>pdb|3UWC|A Chain A, Structure Of An Aminotransferase (Degt-Dnrj-Eryc1-Strs
Family) From Coxiella Burnetii In Complex With Pmp
Length = 374
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208
I VG G D L + GD+++ C TF GA V V ++ + ++ E
Sbjct: 57 IGVGTGTDALAXSFKXLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVIDPE 116
Query: 209 LIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEA 255
I A+ +K K I P + G+I + L KI + L ++++A
Sbjct: 117 KIEAAI-TDKTKAI---XPVHYTGNIADXPALAKIAKKHNLHIVEDA 159
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 111 PEVREALG----QLKFPYIYPDPESRRLRAALAKDSG-----LESDHILVGCGADELIDL 161
PEV++A+ QL + Y Y E L+A L + + + I+ G I +
Sbjct: 47 PEVKQAIHDYAEQLVYGYTYASDE--LLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104
Query: 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREK 218
++ G+ ++ P + + +N +V K + F ++ E + + +
Sbjct: 105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEND 164
Query: 219 PKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAY---TEFSGLESRMEWVKK 271
K L +P+NP G + E L +I + +++V DE + T F V
Sbjct: 165 VKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSP 224
Query: 272 --HDNLIVLRTFSKRAGLAGLRVGYG 295
D +VL + +K +AG + Y
Sbjct: 225 DFKDFALVLSSATKTFNIAGTKNSYA 250
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 31.2 bits (69), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 140 KDSGL--ESDHILVGCGADELIDLIMRCVLDPGDK----IVDCPPTFTMYEFDAAVNGAA 193
+D G+ + D+I + GA + I I++ ++ G K ++ P + +Y A ++
Sbjct: 145 RDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLY--SAVISELD 202
Query: 194 VVKVPRKSD----FSLNVELIADAVEREK----PKCIFLTSPNNPDGSIIND---EDLLK 242
++V D ++LNV + AV+ K PK + + +P NP G + + ED++
Sbjct: 203 AIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIH 262
Query: 243 I-LEMPILVVLDEAYTE 258
E + ++ DE Y +
Sbjct: 263 FAWEEKLFLLADEVYQD 279
>pdb|1VP4|A Chain A, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
pdb|1VP4|B Chain B, Crystal Structure Of A Putative Aminotransferase (Tm1131)
From Thermotoga Maritima Msb8 At 1.82 A Resolution
Length = 425
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNG-----AAVVK 196
+GL+ D+++ G+ + +DLI + LD V P + A+N A V
Sbjct: 105 TGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYL-----GAINAFRQYLANFVV 159
Query: 197 VPRKSD-FSLNV------ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP-- 247
VP + D LNV E + ++ +++ +NP G + E ++E+
Sbjct: 160 VPLEDDGXDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEK 219
Query: 248 --ILVVLDEAYTEFSGLESRMEWVKKH---DNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302
+ +V D+ Y ++ + K + +++L TFSK GLR+G A I
Sbjct: 220 YDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGLRIGXVAGSKEFI 278
Query: 303 EYLWRAKQ 310
+ +AKQ
Sbjct: 279 RKIVQAKQ 286
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Query: 213 AVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTE-FSGL---ES 264
A++ + I + P NP G+++ DE+ + E+ I +++D AY F + ++
Sbjct: 201 ALKEGRIGAICCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAYGXPFPNIIYSDA 260
Query: 265 RMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293
+ W DN +L + GL G R G
Sbjct: 261 HLNW----DNNTILCFSLSKIGLPGXRTG 285
>pdb|3RQ1|A Chain A, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|B Chain B, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|C Chain C, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
pdb|3RQ1|D Chain D, Crystal Structure Of Aminotransferase Class I And Ii From
Veillonella Parvula
Length = 418
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 23/163 (14%)
Query: 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-LNVELIAD 212
G I ++ +PGD+++ + Y + G +V + + N E +
Sbjct: 110 GGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEHNNFNHEAFQN 169
Query: 213 AVEREKPK-----CIFLTSPNNPDGSIINDEDLLKILEM----------PILVVLDEAYT 257
V K IF T NNP G I D+D IL +++ +D AY
Sbjct: 170 RVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYL 229
Query: 258 EFSGLESRME-WVKKHDNL------IVLRTFSKRAGLAGLRVG 293
++SG + + + K +L V + SK G RVG
Sbjct: 230 DYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTXYGQRVG 272
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 222 IFLTSPNNPDGSIINDEDLLKILEMPI----LVVLDEAYTEFS-GLESRMEWVKK----H 272
+F S +NP G E + ++ + L + D AY F+ GLE E ++ H
Sbjct: 176 LFHGSCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMH 235
Query: 273 DNLIVLRTFSKRAGLAGLRVG 293
LIV ++SK GL RVG
Sbjct: 236 KELIVASSYSKNFGLYNERVG 256
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 223 FLTSPNNPDGSIINDEDLLKI-LEMPILVVLDEAYTEFS-GLESRMEWVKK----HDNLI 276
F +P D ++ + L ++ +E L + D AY F+ GLE E ++ H LI
Sbjct: 180 FCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELI 239
Query: 277 VLRTFSKRAGLAGLRVG 293
V ++SK GL RVG
Sbjct: 240 VASSYSKNFGLYNERVG 256
>pdb|1SEN|A Chain A, Endoplasmic Reticulum Protein Rp19 O95881
Length = 164
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 24 FVVPNRTVCPF----QGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHL 71
F+ P+ V P GN S V Q + E Q RLTGD+F + HL
Sbjct: 109 FLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGDAFRKKHL 160
>pdb|2K8V|A Chain A, Solution Structure Of Oxidised Erp18
Length = 157
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Query: 24 FVVPNRTVCPF----QGNQRRVIAMSSTLPVEQQVNEGQRRLTGDSFIRSHL 71
F+ P+ V P GN S V Q + E Q RLTGD+F + HL
Sbjct: 102 FLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGDAFRKKHL 153
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 6/171 (3%)
Query: 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203
L+ +++ G+ L + D GD++ P + Y G V +P +
Sbjct: 89 LDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPEN 148
Query: 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMP----ILVVLDEAYTEF 259
L + AD + + + SP NP G+ ++ ++E + DE Y
Sbjct: 149 RLQ-PVPADFAGLDL-AGLXVASPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGI 206
Query: 260 SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310
+ ++ D V+ +FSK G RVG+ P + + R Q
Sbjct: 207 EYEAKAVTALELTDECYVINSFSKYFSXTGWRVGWXVVPEDQVRVVERIAQ 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,820,364
Number of Sequences: 62578
Number of extensions: 418660
Number of successful extensions: 1307
Number of sequences better than 100.0: 90
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 1157
Number of HSP's gapped (non-prelim): 90
length of query: 334
length of database: 14,973,337
effective HSP length: 99
effective length of query: 235
effective length of database: 8,778,115
effective search space: 2062857025
effective search space used: 2062857025
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)