Query 019868
Match_columns 334
No_of_seqs 321 out of 2286
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:10:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019868.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019868hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03026 histidinol-phosphate 100.0 4.6E-47 9.9E-52 363.3 28.2 285 45-333 6-290 (380)
2 COG0079 HisC Histidinol-phosph 100.0 2E-47 4.4E-52 360.1 24.2 255 68-333 3-262 (356)
3 PRK01533 histidinol-phosphate 100.0 8.1E-45 1.8E-49 346.0 26.3 262 68-333 4-272 (366)
4 COG0436 Aspartate/tyrosine/aro 100.0 1.5E-44 3.2E-49 345.9 25.0 234 95-329 28-285 (393)
5 PRK14809 histidinol-phosphate 100.0 2.3E-43 5.1E-48 335.0 27.4 261 71-333 6-272 (357)
6 PRK01688 histidinol-phosphate 100.0 2.2E-42 4.8E-47 327.7 24.2 249 65-329 7-259 (351)
7 PRK03158 histidinol-phosphate 100.0 4E-42 8.6E-47 326.7 25.4 261 69-333 5-272 (359)
8 PRK09105 putative aminotransfe 100.0 2.4E-41 5.2E-46 322.6 24.3 236 95-333 43-282 (370)
9 PRK02610 histidinol-phosphate 100.0 3.7E-41 8E-46 321.9 24.9 234 96-330 29-281 (374)
10 PRK07392 threonine-phosphate d 100.0 9.6E-41 2.1E-45 317.4 26.4 251 80-333 7-266 (360)
11 PRK05166 histidinol-phosphate 100.0 9.9E-41 2.1E-45 318.6 26.4 264 67-333 10-282 (371)
12 PRK08153 histidinol-phosphate 100.0 8.7E-41 1.9E-45 318.8 25.4 237 96-333 33-273 (369)
13 PRK03967 histidinol-phosphate 100.0 1.3E-40 2.8E-45 313.9 25.8 234 95-333 18-254 (337)
14 PRK00950 histidinol-phosphate 100.0 1.8E-40 3.8E-45 315.4 26.7 265 67-333 6-273 (361)
15 PRK03317 histidinol-phosphate 100.0 7.8E-41 1.7E-45 318.9 23.3 235 96-330 27-275 (368)
16 PRK14807 histidinol-phosphate 100.0 4.5E-40 9.8E-45 311.8 27.3 251 66-329 5-259 (351)
17 PRK04870 histidinol-phosphate 100.0 2.1E-40 4.5E-45 314.6 24.7 237 94-332 25-266 (356)
18 KOG0257 Kynurenine aminotransf 100.0 1E-40 2.2E-45 307.4 20.0 230 100-330 36-294 (420)
19 PRK06358 threonine-phosphate d 100.0 5.4E-40 1.2E-44 311.6 25.4 249 80-332 4-263 (354)
20 PRK07681 aspartate aminotransf 100.0 4.7E-40 1E-44 316.8 24.9 242 90-332 27-291 (399)
21 PRK09147 succinyldiaminopimela 100.0 5.3E-40 1.2E-44 316.1 24.7 240 93-333 27-297 (396)
22 PRK04635 histidinol-phosphate 100.0 4.6E-40 1E-44 312.1 23.9 247 66-329 11-260 (354)
23 PRK02731 histidinol-phosphate 100.0 1E-39 2.2E-44 311.0 25.7 263 67-333 6-275 (367)
24 PRK05387 histidinol-phosphate 100.0 5.2E-40 1.1E-44 311.3 23.5 233 95-333 24-263 (353)
25 PRK08056 threonine-phosphate d 100.0 8.1E-40 1.8E-44 310.7 24.5 251 79-333 4-263 (356)
26 PLN02368 alanine transaminase 100.0 3.7E-40 8.1E-45 317.2 22.4 262 67-329 11-342 (407)
27 PRK06290 aspartate aminotransf 100.0 1.1E-39 2.3E-44 315.1 25.4 240 93-333 42-303 (410)
28 PRK04781 histidinol-phosphate 100.0 1.5E-39 3.2E-44 309.7 25.9 229 96-330 32-267 (364)
29 PRK13355 bifunctional HTH-doma 100.0 1.8E-39 3.8E-44 322.4 25.8 261 67-329 119-406 (517)
30 PRK14808 histidinol-phosphate 100.0 1.6E-39 3.4E-44 306.3 23.8 229 93-332 17-251 (335)
31 PRK08960 hypothetical protein; 100.0 2.2E-39 4.7E-44 311.0 24.8 259 68-328 6-281 (387)
32 PRK07366 succinyldiaminopimela 100.0 1.9E-39 4E-44 311.6 24.1 244 89-333 24-292 (388)
33 PRK06959 putative threonine-ph 100.0 2.3E-39 4.9E-44 305.6 23.3 238 77-333 6-248 (339)
34 TIGR03538 DapC_gpp succinyldia 100.0 3.8E-39 8.3E-44 309.9 23.2 240 93-333 26-296 (393)
35 PRK06348 aspartate aminotransf 100.0 1E-38 2.2E-43 306.1 26.0 234 95-329 29-282 (384)
36 PLN00175 aminotransferase fami 100.0 1.8E-38 3.8E-43 307.1 27.8 259 67-332 32-311 (413)
37 PRK03321 putative aminotransfe 100.0 5.7E-39 1.2E-43 304.2 23.0 234 95-329 22-262 (352)
38 PRK09276 LL-diaminopimelate am 100.0 1.4E-38 3.1E-43 305.1 25.3 262 69-332 6-291 (385)
39 PRK05839 hypothetical protein; 100.0 8.5E-39 1.8E-43 305.6 23.4 248 82-333 10-284 (374)
40 KOG0633 Histidinol phosphate a 100.0 1.1E-39 2.4E-44 282.7 15.4 260 61-329 10-273 (375)
41 PRK08068 transaminase; Reviewe 100.0 1.5E-38 3.2E-43 305.4 24.7 239 93-332 30-292 (389)
42 PLN00143 tyrosine/nicotianamin 100.0 2.1E-38 4.5E-43 306.3 24.8 239 93-332 30-302 (409)
43 PLN02187 rooty/superroot1 100.0 3.8E-38 8.2E-43 308.4 25.6 240 93-333 64-337 (462)
44 PRK06207 aspartate aminotransf 100.0 7E-38 1.5E-42 302.3 25.5 238 94-332 38-303 (405)
45 PRK07324 transaminase; Validat 100.0 2.9E-38 6.3E-43 301.8 21.6 239 89-329 20-270 (373)
46 PRK07337 aminotransferase; Val 100.0 1.1E-37 2.4E-42 299.2 25.4 243 86-329 21-280 (388)
47 PTZ00377 alanine aminotransfer 100.0 5.1E-38 1.1E-42 309.4 23.0 261 67-328 10-349 (481)
48 PLN02450 1-aminocyclopropane-1 100.0 3.1E-38 6.6E-43 309.5 21.0 237 94-331 37-321 (468)
49 PRK05942 aspartate aminotransf 100.0 1.2E-37 2.7E-42 299.5 24.7 242 86-328 26-290 (394)
50 PRK09148 aminotransferase; Val 100.0 1.3E-37 2.8E-42 300.4 24.8 240 92-332 27-290 (405)
51 PLN02656 tyrosine transaminase 100.0 1.4E-37 3.1E-42 300.5 24.9 235 93-328 29-295 (409)
52 PRK12414 putative aminotransfe 100.0 1.3E-37 2.9E-42 298.3 24.2 236 95-331 29-285 (384)
53 TIGR03540 DapC_direct LL-diami 100.0 1.8E-37 3.9E-42 297.3 24.6 239 93-332 27-289 (383)
54 TIGR01141 hisC histidinol-phos 100.0 2.1E-37 4.6E-42 292.6 24.5 238 94-332 18-259 (346)
55 PLN00145 tyrosine/nicotianamin 100.0 4.7E-37 1E-41 298.4 25.7 234 94-328 51-316 (430)
56 PTZ00433 tyrosine aminotransfe 100.0 3.3E-37 7.1E-42 298.3 24.5 235 93-328 31-301 (412)
57 PRK08636 aspartate aminotransf 100.0 4.8E-37 1E-41 296.3 25.3 248 85-332 23-300 (403)
58 PRK07682 hypothetical protein; 100.0 4E-37 8.8E-42 294.3 23.9 234 95-329 20-274 (378)
59 TIGR01264 tyr_amTase_E tyrosin 100.0 4.3E-37 9.4E-42 296.4 24.3 239 93-332 29-298 (401)
60 TIGR03537 DapC succinyldiamino 100.0 5.4E-37 1.2E-41 290.6 24.2 236 97-333 2-258 (350)
61 PRK06425 histidinol-phosphate 100.0 4.8E-37 1E-41 289.0 23.7 210 96-322 17-232 (332)
62 PRK05664 threonine-phosphate d 100.0 4.1E-37 9E-42 289.2 23.1 231 81-332 6-241 (330)
63 PRK15481 transcriptional regul 100.0 2.4E-37 5.3E-42 300.9 20.9 234 95-331 85-331 (431)
64 PRK09265 aminotransferase AlaT 100.0 1.9E-36 4.1E-41 292.3 26.4 247 83-330 21-294 (404)
65 PLN02376 1-aminocyclopropane-1 100.0 2.6E-37 5.7E-42 304.3 20.0 240 93-332 44-329 (496)
66 PRK06108 aspartate aminotransf 100.0 1.7E-36 3.7E-41 290.1 24.5 237 95-332 24-284 (382)
67 PRK05957 aspartate aminotransf 100.0 2.5E-36 5.4E-41 290.0 25.2 238 95-333 27-286 (389)
68 PRK08363 alanine aminotransfer 100.0 2.1E-36 4.6E-41 291.3 24.4 243 89-332 24-294 (398)
69 PRK07908 hypothetical protein; 100.0 2.2E-36 4.7E-41 286.3 24.0 226 94-328 21-249 (349)
70 PRK07550 hypothetical protein; 100.0 2E-36 4.3E-41 290.4 24.0 245 87-332 21-288 (386)
71 PRK06855 aminotransferase; Val 100.0 3.4E-36 7.4E-41 292.8 25.4 242 88-330 25-299 (433)
72 PRK08912 hypothetical protein; 100.0 6.4E-36 1.4E-40 286.9 26.0 237 95-332 26-284 (387)
73 PRK07590 L,L-diaminopimelate a 100.0 1.6E-36 3.5E-41 293.2 22.0 227 94-328 33-308 (409)
74 PRK07865 N-succinyldiaminopime 100.0 2.4E-36 5.2E-41 287.6 22.8 239 83-332 15-274 (364)
75 PRK08361 aspartate aminotransf 100.0 5E-36 1.1E-40 288.1 24.9 235 95-330 33-286 (391)
76 PRK07683 aminotransferase A; V 100.0 7.1E-36 1.5E-40 286.7 25.1 234 95-329 28-281 (387)
77 PRK09082 methionine aminotrans 100.0 6.1E-36 1.3E-40 287.0 24.0 237 95-332 30-288 (386)
78 PRK07568 aspartate aminotransf 100.0 1.1E-35 2.3E-40 286.1 25.4 235 94-329 29-283 (397)
79 TIGR03539 DapC_actino succinyl 100.0 3.7E-36 8.1E-41 285.6 21.5 239 83-332 9-268 (357)
80 PRK07309 aromatic amino acid a 100.0 1.5E-35 3.3E-40 284.7 25.7 236 95-330 30-286 (391)
81 PTZ00376 aspartate aminotransf 100.0 7.1E-36 1.5E-40 288.2 23.0 237 95-331 29-308 (404)
82 PRK06107 aspartate aminotransf 100.0 1.9E-35 4.1E-40 285.1 25.7 239 93-332 31-293 (402)
83 PRK05764 aspartate aminotransf 100.0 1.6E-35 3.5E-40 284.5 25.2 258 68-327 5-284 (393)
84 PLN02607 1-aminocyclopropane-1 100.0 7E-36 1.5E-40 291.0 20.8 239 93-332 45-329 (447)
85 TIGR03542 DAPAT_plant LL-diami 100.0 6.7E-36 1.5E-40 288.3 20.5 231 94-331 32-304 (402)
86 TIGR01140 L_thr_O3P_dcar L-thr 100.0 2.3E-35 5E-40 277.4 23.6 238 80-332 2-243 (330)
87 PRK08354 putative aminotransfe 100.0 2.3E-35 5E-40 275.1 22.7 215 93-329 6-225 (311)
88 PRK09275 aspartate aminotransf 100.0 1.1E-35 2.5E-40 291.6 21.2 202 96-300 101-328 (527)
89 PRK09257 aromatic amino acid a 100.0 3.9E-35 8.4E-40 282.4 24.2 236 95-330 26-302 (396)
90 PRK06225 aspartate aminotransf 100.0 1.5E-34 3.4E-39 276.7 24.6 233 94-328 27-271 (380)
91 TIGR01265 tyr_nico_aTase tyros 100.0 8.9E-35 1.9E-39 280.5 23.0 235 93-328 29-294 (403)
92 PLN02397 aspartate transaminas 100.0 1.8E-34 3.9E-39 279.9 22.8 236 94-330 47-325 (423)
93 PLN02231 alanine transaminase 100.0 3.1E-34 6.8E-39 284.2 24.8 232 96-328 130-401 (534)
94 PRK08175 aminotransferase; Val 100.0 6.1E-34 1.3E-38 274.0 25.3 236 92-328 26-284 (395)
95 PF00155 Aminotran_1_2: Aminot 100.0 6.2E-35 1.3E-39 277.2 18.0 235 96-330 2-268 (363)
96 PRK07777 aminotransferase; Val 100.0 6.3E-34 1.4E-38 273.1 24.8 237 95-332 24-284 (387)
97 PRK06836 aspartate aminotransf 100.0 1.8E-33 3.9E-38 270.7 25.3 234 95-329 33-299 (394)
98 COG1168 MalY Bifunctional PLP- 100.0 6.9E-34 1.5E-38 259.9 21.0 238 95-333 25-287 (388)
99 TIGR03801 asp_4_decarbox aspar 100.0 1.4E-33 3E-38 276.6 21.3 202 96-300 95-327 (521)
100 COG1167 ARO8 Transcriptional r 100.0 3.3E-33 7.1E-38 273.0 22.8 235 95-331 89-348 (459)
101 PRK09440 avtA valine--pyruvate 100.0 2.5E-33 5.4E-38 271.5 21.7 234 95-332 30-299 (416)
102 KOG0259 Tyrosine aminotransfer 100.0 3.8E-33 8.2E-38 253.5 21.3 237 95-332 61-331 (447)
103 PLN02672 methionine S-methyltr 100.0 4.7E-33 1E-37 288.6 24.4 234 93-326 695-957 (1082)
104 PRK08637 hypothetical protein; 100.0 1.2E-32 2.5E-37 264.5 22.5 222 111-332 23-288 (388)
105 KOG0256 1-aminocyclopropane-1- 100.0 4.9E-30 1.1E-34 235.2 16.4 241 93-333 71-354 (471)
106 cd00609 AAT_like Aspartate ami 99.9 2.5E-26 5.3E-31 215.8 21.9 231 98-329 1-253 (350)
107 PRK07049 methionine gamma-lyas 99.9 1.5E-25 3.2E-30 217.3 20.7 194 124-328 78-289 (427)
108 PRK10534 L-threonine aldolase; 99.9 1.3E-25 2.8E-30 211.2 15.7 222 97-328 1-244 (333)
109 COG1448 TyrB Aspartate/tyrosin 99.9 5.9E-25 1.3E-29 201.5 19.5 260 73-333 4-305 (396)
110 PRK13238 tnaA tryptophanase/L- 99.9 1E-24 2.3E-29 212.9 22.0 249 74-328 16-311 (460)
111 cd06502 TA_like Low-specificit 99.9 1.5E-24 3.2E-29 203.9 18.0 221 103-331 4-246 (338)
112 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 1.4E-23 3.1E-28 199.6 21.3 202 105-313 9-230 (361)
113 TIGR01822 2am3keto_CoA 2-amino 99.9 3.2E-23 6.9E-28 199.2 23.8 226 93-327 36-286 (393)
114 PRK10874 cysteine sulfinate de 99.9 3.8E-23 8.3E-28 199.3 24.0 203 96-306 19-243 (401)
115 TIGR03392 FeS_syn_CsdA cystein 99.9 7E-23 1.5E-27 197.3 23.7 203 96-306 16-240 (398)
116 TIGR03576 pyridox_MJ0158 pyrid 99.9 2.8E-23 6E-28 196.3 20.4 207 107-328 32-249 (346)
117 TIGR00858 bioF 8-amino-7-oxono 99.9 5.5E-23 1.2E-27 194.6 21.8 224 93-327 14-262 (360)
118 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.5E-23 5.5E-28 198.6 18.5 191 131-328 53-262 (370)
119 PLN02242 methionine gamma-lyas 99.9 3.7E-23 8E-28 199.9 19.4 189 126-327 73-272 (418)
120 PRK06234 methionine gamma-lyas 99.9 7.6E-23 1.7E-27 197.0 21.4 192 124-328 59-262 (400)
121 PRK06939 2-amino-3-ketobutyrat 99.9 6E-22 1.3E-26 190.3 22.1 225 93-326 40-289 (397)
122 TIGR01979 sufS cysteine desulf 99.9 6.7E-22 1.5E-26 190.7 22.1 205 94-306 16-242 (403)
123 TIGR02080 O_succ_thio_ly O-suc 99.9 3.3E-22 7.1E-27 191.4 19.3 211 98-327 26-245 (382)
124 PRK06460 hypothetical protein; 99.9 2.5E-22 5.5E-27 191.9 18.2 175 127-314 43-223 (376)
125 PRK09295 bifunctional cysteine 99.9 7.6E-22 1.7E-26 190.6 21.8 202 96-305 23-246 (406)
126 PRK02948 cysteine desulfurase; 99.9 2.7E-22 5.9E-27 192.0 17.8 223 98-328 2-250 (381)
127 TIGR00707 argD acetylornithine 99.9 2.9E-22 6.3E-27 191.5 17.9 228 93-327 25-284 (379)
128 cd06451 AGAT_like Alanine-glyo 99.9 1.4E-21 3E-26 185.3 22.3 198 105-307 6-209 (356)
129 PRK08045 cystathionine gamma-s 99.9 8.2E-22 1.8E-26 188.8 20.4 192 124-328 47-247 (386)
130 PLN02721 threonine aldolase 99.9 4.7E-22 1E-26 188.0 18.3 209 95-311 5-234 (353)
131 PLN02855 Bifunctional selenocy 99.9 1.3E-21 2.8E-26 190.1 21.1 204 95-306 31-256 (424)
132 PRK05958 8-amino-7-oxononanoat 99.9 3.3E-21 7.2E-26 184.2 23.4 225 93-327 37-284 (385)
133 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.3E-21 5.1E-26 186.1 21.7 209 94-309 17-245 (387)
134 KOG0634 Aromatic amino acid am 99.9 7.5E-22 1.6E-26 182.8 17.3 203 124-328 94-341 (472)
135 TIGR01825 gly_Cac_T_rel pyrido 99.9 4.3E-21 9.3E-26 183.8 23.1 225 93-327 31-278 (385)
136 PRK13392 5-aminolevulinate syn 99.9 1.2E-21 2.7E-26 189.4 19.4 224 95-328 46-294 (410)
137 cd00617 Tnase_like Tryptophana 99.9 2.8E-21 6E-26 186.7 20.3 213 91-308 7-259 (431)
138 PRK08249 cystathionine gamma-s 99.9 2.3E-21 5.1E-26 186.4 19.7 191 125-328 60-258 (398)
139 PRK07503 methionine gamma-lyas 99.9 2.9E-21 6.3E-26 186.2 20.1 192 124-328 60-261 (403)
140 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.3E-21 9.3E-26 184.6 21.1 204 97-309 18-241 (397)
141 cd06454 KBL_like KBL_like; thi 99.9 8.2E-21 1.8E-25 179.2 21.8 222 97-328 3-248 (349)
142 PRK07504 O-succinylhomoserine 99.9 2.7E-21 5.9E-26 186.1 18.7 192 124-328 60-260 (398)
143 PRK08133 O-succinylhomoserine 99.9 4E-21 8.7E-26 184.5 19.7 188 126-326 58-253 (390)
144 PLN02822 serine palmitoyltrans 99.9 1.4E-20 2.9E-25 185.3 23.4 225 93-327 107-361 (481)
145 TIGR01328 met_gam_lyase methio 99.9 5.4E-21 1.2E-25 183.6 19.0 192 124-328 54-255 (391)
146 PRK08247 cystathionine gamma-s 99.9 4.8E-21 1E-25 182.6 18.4 190 124-327 47-245 (366)
147 TIGR01325 O_suc_HS_sulf O-succ 99.9 8.8E-21 1.9E-25 181.6 20.3 191 124-327 49-247 (380)
148 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 2.1E-21 4.5E-26 188.1 15.2 163 124-299 52-219 (418)
149 PRK08861 cystathionine gamma-s 99.9 1.3E-20 2.8E-25 180.4 20.1 192 124-328 48-248 (388)
150 PRK08776 cystathionine gamma-s 99.9 1.3E-20 2.8E-25 181.6 20.1 192 124-328 55-255 (405)
151 PRK07810 O-succinylhomoserine 99.9 1E-20 2.2E-25 182.3 19.2 192 124-328 65-265 (403)
152 cd06453 SufS_like Cysteine des 99.9 1.7E-20 3.7E-25 179.0 20.3 171 131-308 45-224 (373)
153 PRK06767 methionine gamma-lyas 99.9 1.5E-20 3.3E-25 180.4 19.1 192 124-328 56-256 (386)
154 PRK03244 argD acetylornithine 99.9 8E-21 1.7E-25 183.0 16.9 226 92-327 40-297 (398)
155 PRK07050 cystathionine beta-ly 99.9 2.2E-20 4.8E-25 179.5 18.9 192 124-328 60-260 (394)
156 PRK02627 acetylornithine amino 99.9 7.6E-21 1.6E-25 182.9 15.8 229 92-327 36-296 (396)
157 PRK13479 2-aminoethylphosphona 99.9 4.7E-20 1E-24 175.8 20.8 198 104-308 11-217 (368)
158 PRK07179 hypothetical protein; 99.9 1.2E-19 2.5E-24 175.5 23.8 209 93-311 52-276 (407)
159 cd00613 GDC-P Glycine cleavage 99.9 5.1E-20 1.1E-24 177.1 21.0 203 96-305 21-246 (398)
160 PRK07811 cystathionine gamma-s 99.9 4.8E-20 1E-24 176.9 20.3 192 124-328 56-256 (388)
161 PRK07582 cystathionine gamma-l 99.9 3.2E-20 6.9E-25 176.9 18.8 188 124-328 46-242 (366)
162 TIGR01977 am_tr_V_EF2568 cyste 99.9 2.6E-20 5.7E-25 177.7 17.8 196 99-300 2-215 (376)
163 PLN02409 serine--glyoxylate am 99.8 1.2E-19 2.6E-24 175.1 21.9 199 104-307 15-224 (401)
164 cd00614 CGS_like CGS_like: Cys 99.8 6.4E-20 1.4E-24 175.1 19.6 190 126-328 37-235 (369)
165 PLN02483 serine palmitoyltrans 99.8 8.9E-20 1.9E-24 179.8 20.5 223 94-326 99-355 (489)
166 PRK00451 glycine dehydrogenase 99.8 8.7E-20 1.9E-24 178.5 20.2 201 96-305 69-290 (447)
167 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 1.2E-19 2.7E-24 171.4 20.6 194 106-306 7-209 (355)
168 TIGR01437 selA_rel uncharacter 99.8 1.5E-19 3.2E-24 172.2 19.9 185 109-307 25-231 (363)
169 cd00610 OAT_like Acetyl ornith 99.8 5E-20 1.1E-24 178.0 17.0 234 92-327 33-307 (413)
170 cd00615 Orn_deC_like Ornithine 99.8 1.7E-19 3.8E-24 166.9 19.3 169 124-296 54-231 (294)
171 PRK08574 cystathionine gamma-s 99.8 1.7E-19 3.6E-24 172.9 19.5 191 125-328 49-247 (385)
172 TIGR01821 5aminolev_synth 5-am 99.8 4.7E-19 1E-23 171.0 22.5 224 95-328 45-293 (402)
173 cd00378 SHMT Serine-glycine hy 99.8 2.5E-19 5.5E-24 172.7 19.5 207 96-311 20-251 (402)
174 COG3977 Alanine-alpha-ketoisov 99.8 1.4E-19 3E-24 160.7 16.0 231 95-333 30-300 (417)
175 KOG0258 Alanine aminotransfera 99.8 3.6E-20 7.9E-25 169.4 12.6 200 124-323 107-341 (475)
176 PRK09064 5-aminolevulinate syn 99.8 1E-18 2.2E-23 168.8 23.3 223 95-327 46-293 (407)
177 PRK09028 cystathionine beta-ly 99.8 6.9E-19 1.5E-23 168.5 20.6 211 105-328 33-255 (394)
178 COG0520 csdA Selenocysteine ly 99.8 7.8E-19 1.7E-23 168.6 20.3 204 94-305 20-245 (405)
179 TIGR02006 IscS cysteine desulf 99.8 4.9E-19 1.1E-23 170.9 18.4 197 98-302 5-221 (402)
180 PRK08064 cystathionine beta-ly 99.8 5.3E-19 1.2E-23 169.8 18.4 174 128-315 53-233 (390)
181 TIGR03403 nifS_epsilon cystein 99.8 3.9E-19 8.4E-24 170.4 17.2 212 109-327 11-251 (382)
182 PRK01278 argD acetylornithine 99.8 4E-19 8.7E-24 170.7 17.4 229 92-327 28-289 (389)
183 PRK00011 glyA serine hydroxyme 99.8 7.4E-19 1.6E-23 170.3 19.3 208 95-311 25-255 (416)
184 TIGR03235 DNA_S_dndA cysteine 99.8 1E-18 2.2E-23 165.6 19.4 165 131-302 44-217 (353)
185 KOG1412 Aspartate aminotransfe 99.8 9.2E-19 2E-23 156.1 17.6 247 86-333 20-312 (410)
186 PRK14012 cysteine desulfurase; 99.8 7.9E-19 1.7E-23 169.5 18.8 196 98-301 5-222 (404)
187 KOG1411 Aspartate aminotransfe 99.8 4.6E-19 1E-23 160.0 14.7 250 82-332 38-331 (427)
188 cd01494 AAT_I Aspartate aminot 99.8 1E-18 2.2E-23 147.0 15.9 165 131-298 2-170 (170)
189 PRK08248 O-acetylhomoserine am 99.8 1.2E-18 2.7E-23 169.0 18.7 158 127-297 62-224 (431)
190 TIGR01324 cysta_beta_ly_B cyst 99.8 2.3E-18 4.9E-23 164.5 19.9 188 127-327 48-243 (377)
191 PRK11658 UDP-4-amino-4-deoxy-L 99.8 1.8E-18 3.9E-23 165.7 19.0 187 112-309 15-207 (379)
192 TIGR03812 tyr_de_CO2_Arch tyro 99.8 3.2E-18 6.8E-23 163.2 20.3 173 131-306 61-248 (373)
193 TIGR02326 transamin_PhnW 2-ami 99.8 3.2E-18 6.9E-23 162.9 20.2 194 106-306 11-213 (363)
194 TIGR02379 ECA_wecE TDP-4-keto- 99.8 2.2E-18 4.7E-23 164.8 19.0 188 111-309 11-207 (376)
195 PRK06702 O-acetylhomoserine am 99.8 3.7E-18 8.1E-23 164.9 19.7 189 128-328 60-288 (432)
196 PRK13393 5-aminolevulinate syn 99.8 9E-18 1.9E-22 162.3 22.2 224 95-328 45-293 (406)
197 PLN02651 cysteine desulfurase 99.8 3.5E-18 7.6E-23 162.8 19.1 212 108-326 10-250 (364)
198 PRK07671 cystathionine beta-ly 99.8 5.3E-18 1.1E-22 162.2 19.8 187 124-324 45-240 (377)
199 TIGR01329 cysta_beta_ly_E cyst 99.8 6.1E-18 1.3E-22 161.9 19.7 185 128-326 46-239 (378)
200 PRK13520 L-tyrosine decarboxyl 99.8 8.5E-18 1.8E-22 160.1 20.6 197 108-306 31-243 (371)
201 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 7.7E-18 1.7E-22 161.1 20.4 185 114-309 14-206 (375)
202 PRK05939 hypothetical protein; 99.8 4.6E-18 1E-22 163.5 18.8 158 128-298 46-207 (397)
203 TIGR03402 FeS_nifS cysteine de 99.8 4.1E-18 8.9E-23 163.1 18.1 186 108-300 10-213 (379)
204 PRK07269 cystathionine gamma-s 99.8 3.3E-18 7.2E-23 162.7 16.7 192 124-328 49-246 (364)
205 PRK05968 hypothetical protein; 99.8 1.1E-17 2.4E-22 160.6 20.5 190 125-328 59-257 (389)
206 PLN03227 serine palmitoyltrans 99.8 4E-17 8.6E-22 157.0 21.8 221 99-327 2-255 (392)
207 TIGR00713 hemL glutamate-1-sem 99.8 1.3E-17 2.8E-22 162.1 18.1 231 91-327 44-311 (423)
208 PRK07505 hypothetical protein; 99.8 4.2E-17 9.2E-22 157.4 21.3 224 92-327 43-297 (402)
209 PRK06084 O-acetylhomoserine am 99.8 8.9E-18 1.9E-22 162.8 16.6 160 126-298 55-219 (425)
210 PRK04073 rocD ornithine--oxo-a 99.8 1.7E-17 3.7E-22 159.9 18.1 228 91-327 36-301 (396)
211 COG0156 BioF 7-keto-8-aminopel 99.8 9.7E-17 2.1E-21 151.9 21.1 224 94-327 38-287 (388)
212 PRK06176 cystathionine gamma-s 99.8 6.9E-17 1.5E-21 154.6 19.3 174 124-311 45-225 (380)
213 cd06450 DOPA_deC_like DOPA dec 99.8 2.4E-17 5.1E-22 155.5 15.8 174 124-298 28-230 (345)
214 KOG1549 Cysteine desulfurase N 99.7 4.1E-17 8.9E-22 153.1 16.8 199 93-299 40-257 (428)
215 PRK05967 cystathionine beta-ly 99.7 7E-17 1.5E-21 154.5 18.3 191 124-327 56-257 (395)
216 PLN02509 cystathionine beta-ly 99.7 3E-16 6.5E-21 153.0 19.1 191 124-328 125-327 (464)
217 cd00616 AHBA_syn 3-amino-5-hyd 99.7 8.3E-16 1.8E-20 145.3 20.8 170 127-308 16-192 (352)
218 PRK15407 lipopolysaccharide bi 99.7 7.9E-16 1.7E-20 149.8 20.9 198 98-307 26-244 (438)
219 PRK00854 rocD ornithine--oxo-a 99.7 4.5E-16 9.8E-21 150.1 18.9 227 92-328 38-303 (401)
220 PRK05994 O-acetylhomoserine am 99.7 3.1E-16 6.7E-21 152.3 17.7 158 127-297 61-223 (427)
221 TIGR03588 PseC UDP-4-keto-6-de 99.7 7E-16 1.5E-20 147.8 19.6 173 127-308 27-209 (380)
222 PRK04260 acetylornithine amino 99.7 5E-16 1.1E-20 148.6 18.5 230 92-328 26-280 (375)
223 PRK02936 argD acetylornithine 99.7 7.6E-16 1.6E-20 147.3 19.1 232 92-328 26-282 (377)
224 PRK05093 argD bifunctional N-s 99.7 7.1E-16 1.5E-20 149.0 18.8 225 92-327 37-298 (403)
225 PLN02955 8-amino-7-oxononanoat 99.7 2.3E-15 5E-20 145.8 21.7 208 94-311 101-344 (476)
226 PF12897 Aminotran_MocR: Alani 99.7 7.7E-16 1.7E-20 142.1 17.4 205 124-330 62-302 (425)
227 PRK08134 O-acetylhomoserine am 99.7 1E-15 2.2E-20 148.7 18.4 158 127-297 62-224 (433)
228 PRK04366 glycine dehydrogenase 99.7 1.1E-15 2.3E-20 150.7 18.9 202 99-305 72-297 (481)
229 PF00266 Aminotran_5: Aminotra 99.7 1E-15 2.3E-20 146.1 16.9 172 131-309 45-225 (371)
230 PRK05937 8-amino-7-oxononanoat 99.7 8E-15 1.7E-19 140.1 22.7 223 94-326 3-256 (370)
231 PTZ00125 ornithine aminotransf 99.7 3E-15 6.4E-20 144.3 19.4 232 92-327 28-293 (400)
232 PRK07812 O-acetylhomoserine am 99.7 6.3E-15 1.4E-19 143.1 20.5 158 128-297 68-230 (436)
233 COG0399 WecE Predicted pyridox 99.7 3.2E-15 7E-20 140.7 17.6 169 128-308 33-208 (374)
234 PRK08114 cystathionine beta-ly 99.7 5.8E-15 1.3E-19 141.3 19.5 188 127-327 60-257 (395)
235 PRK12381 bifunctional succinyl 99.6 7.6E-15 1.6E-19 141.9 18.2 229 91-327 35-297 (406)
236 COG1104 NifS Cysteine sulfinat 99.6 8.1E-15 1.8E-19 137.1 15.6 195 98-300 3-218 (386)
237 TIGR03246 arg_catab_astC succi 99.6 3.1E-14 6.8E-19 137.2 19.1 227 91-327 31-293 (397)
238 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 1.8E-14 3.9E-19 137.6 16.9 189 127-328 53-252 (386)
239 TIGR03531 selenium_SpcS O-phos 99.6 8.7E-14 1.9E-18 134.7 20.8 193 132-328 108-318 (444)
240 TIGR01814 kynureninase kynuren 99.6 4.4E-14 9.5E-19 136.6 18.6 197 95-300 26-248 (406)
241 PRK08088 4-aminobutyrate amino 99.6 2.6E-14 5.7E-19 139.0 16.9 235 91-328 37-314 (425)
242 KOG0053 Cystathionine beta-lya 99.6 1E-13 2.2E-18 130.1 17.5 189 126-327 74-271 (409)
243 PRK05613 O-acetylhomoserine am 99.6 5.9E-14 1.3E-18 136.4 15.9 158 128-297 68-230 (437)
244 PF01041 DegT_DnrJ_EryC1: DegT 99.6 8.6E-14 1.9E-18 132.6 16.2 188 129-328 25-238 (363)
245 PLN02624 ornithine-delta-amino 99.6 2.6E-13 5.7E-18 133.6 20.0 227 91-327 71-339 (474)
246 PRK00062 glutamate-1-semialdeh 99.6 2E-13 4.3E-18 132.9 18.8 231 92-327 47-313 (426)
247 TIGR01885 Orn_aminotrans ornit 99.6 1.7E-13 3.6E-18 132.4 18.0 228 92-328 34-302 (401)
248 COG0626 MetC Cystathionine bet 99.6 3.5E-13 7.6E-18 127.7 19.3 189 127-327 61-259 (396)
249 PRK08360 4-aminobutyrate amino 99.5 5.2E-13 1.1E-17 130.4 19.4 234 91-328 37-319 (443)
250 PRK04612 argD acetylornithine 99.5 5.1E-13 1.1E-17 129.1 19.2 234 91-328 36-302 (408)
251 PF06838 Met_gamma_lyase: Meth 99.5 5E-13 1.1E-17 122.9 17.9 180 123-310 48-250 (403)
252 PRK04311 selenocysteine syntha 99.5 3.2E-12 7E-17 124.9 21.9 191 109-307 98-315 (464)
253 PTZ00094 serine hydroxymethylt 99.5 1.1E-12 2.3E-17 128.7 18.5 204 95-305 34-265 (452)
254 PLN00144 acetylornithine trans 99.5 5.8E-13 1.3E-17 127.8 16.2 230 92-332 12-289 (382)
255 PRK06434 cystathionine gamma-l 99.5 1.2E-12 2.7E-17 125.1 17.7 186 127-328 62-256 (384)
256 PRK08117 4-aminobutyrate amino 99.5 1.8E-12 3.9E-17 126.4 18.1 235 91-327 39-321 (433)
257 PRK13034 serine hydroxymethylt 99.5 3.2E-12 7E-17 123.9 19.8 205 95-309 28-256 (416)
258 TIGR00700 GABAtrnsam 4-aminobu 99.5 1.8E-12 4E-17 125.9 17.9 235 91-327 29-311 (420)
259 TIGR00474 selA seryl-tRNA(sec) 99.5 5.8E-12 1.3E-16 122.7 20.1 190 109-306 93-309 (454)
260 PLN02414 glycine dehydrogenase 99.5 7.2E-13 1.6E-17 138.5 14.6 169 132-305 571-755 (993)
261 PRK02769 histidine decarboxyla 99.5 1.7E-12 3.8E-17 124.1 15.9 171 132-305 68-252 (380)
262 PLN02724 Molybdenum cofactor s 99.5 3.1E-12 6.7E-17 133.5 19.0 205 97-306 35-284 (805)
263 PRK09792 4-aminobutyrate trans 99.4 4.4E-12 9.6E-17 123.2 17.4 233 91-327 36-312 (421)
264 COG0075 Serine-pyruvate aminot 99.4 1.6E-11 3.4E-16 115.8 19.5 199 105-308 12-217 (383)
265 PF01212 Beta_elim_lyase: Beta 99.4 7.6E-13 1.6E-17 121.9 10.3 195 109-308 7-218 (290)
266 PRK06777 4-aminobutyrate amino 99.4 5.1E-12 1.1E-16 122.8 16.6 233 91-327 36-312 (421)
267 COG2873 MET17 O-acetylhomoseri 99.4 5.3E-12 1.2E-16 116.0 15.1 164 122-298 52-223 (426)
268 PRK07495 4-aminobutyrate amino 99.4 8E-12 1.7E-16 121.4 17.0 234 91-327 36-312 (425)
269 PF01276 OKR_DC_1: Orn/Lys/Arg 99.4 2.5E-12 5.4E-17 122.9 13.2 167 127-297 64-253 (417)
270 PLN03032 serine decarboxylase; 99.4 6.3E-12 1.4E-16 119.7 15.9 173 131-306 68-256 (374)
271 TIGR02618 tyr_phenol_ly tyrosi 99.4 2.8E-11 6E-16 116.3 20.3 203 97-310 40-279 (450)
272 COG2008 GLY1 Threonine aldolas 99.4 6.8E-12 1.5E-16 115.4 15.4 224 103-332 6-251 (342)
273 PRK06918 4-aminobutyrate amino 99.4 1.3E-11 2.8E-16 121.0 17.2 234 91-327 50-333 (451)
274 cd00611 PSAT_like Phosphoserin 99.4 6.8E-12 1.5E-16 119.3 13.9 187 105-306 6-214 (355)
275 PF04864 Alliinase_C: Allinase 99.4 1.3E-12 2.9E-17 119.3 8.0 180 131-327 45-241 (363)
276 KOG1368 Threonine aldolase [Am 99.4 1.3E-11 2.8E-16 110.2 13.0 225 97-328 23-272 (384)
277 PRK05964 adenosylmethionine--8 99.3 7.3E-11 1.6E-15 114.8 17.1 236 91-327 38-321 (423)
278 PRK06058 4-aminobutyrate amino 99.3 2.1E-10 4.5E-15 112.2 19.7 232 91-327 52-333 (443)
279 COG1103 Archaea-specific pyrid 99.3 3.1E-10 6.7E-15 100.3 18.6 194 109-309 29-243 (382)
280 PRK13580 serine hydroxymethylt 99.3 3.3E-10 7.1E-15 110.4 20.5 208 95-309 49-310 (493)
281 TIGR01788 Glu-decarb-GAD gluta 99.3 4.8E-11 1.1E-15 115.8 14.1 191 108-300 52-277 (431)
282 PRK03080 phosphoserine aminotr 99.3 7.2E-11 1.6E-15 113.2 14.8 188 105-307 19-217 (378)
283 PRK15029 arginine decarboxylas 99.3 2.9E-10 6.3E-15 116.2 19.3 167 127-297 203-399 (755)
284 COG0112 GlyA Glycine/serine hy 99.3 1.2E-10 2.5E-15 108.1 14.4 208 96-312 27-257 (413)
285 COG4992 ArgD Ornithine/acetylo 99.3 8.1E-11 1.7E-15 110.4 13.1 234 90-327 37-298 (404)
286 PRK03715 argD acetylornithine 99.2 2.3E-10 5E-15 110.3 16.5 230 92-327 33-292 (395)
287 PRK13237 tyrosine phenol-lyase 99.2 9.9E-10 2.1E-14 105.9 20.6 181 124-310 72-286 (460)
288 KOG1360 5-aminolevulinate synt 99.2 8.1E-10 1.8E-14 102.3 18.2 255 62-326 128-417 (570)
289 PLN02271 serine hydroxymethylt 99.2 1.1E-09 2.4E-14 107.4 20.2 196 95-299 148-375 (586)
290 PRK06541 hypothetical protein; 99.2 9.1E-10 2E-14 108.1 19.6 233 91-327 48-340 (460)
291 COG4100 Cystathionine beta-lya 99.2 5.9E-10 1.3E-14 99.8 15.4 176 124-306 60-257 (416)
292 TIGR03372 putres_am_tran putre 99.2 1.1E-09 2.4E-14 106.8 18.6 228 91-327 71-341 (442)
293 PF00464 SHMT: Serine hydroxym 99.2 3E-10 6.6E-15 108.2 13.9 207 97-312 22-273 (399)
294 PLN03226 serine hydroxymethylt 99.2 1.9E-09 4.2E-14 106.0 19.9 200 96-302 35-263 (475)
295 KOG1359 Glycine C-acetyltransf 99.2 3.3E-10 7.2E-15 101.1 12.4 204 95-311 67-289 (417)
296 PRK08593 4-aminobutyrate amino 99.2 1.8E-09 4E-14 105.6 18.9 233 91-327 38-321 (445)
297 PRK13578 ornithine decarboxyla 99.2 1.9E-09 4E-14 109.4 18.6 167 127-297 172-368 (720)
298 TIGR00709 dat 2,4-diaminobutyr 99.2 2.3E-09 5E-14 104.8 18.5 232 91-327 35-319 (442)
299 TIGR01364 serC_1 phosphoserine 99.2 7.1E-10 1.5E-14 105.1 14.4 158 131-305 39-205 (349)
300 TIGR00461 gcvP glycine dehydro 99.1 1.1E-09 2.3E-14 113.8 16.6 168 131-304 532-716 (939)
301 COG0076 GadB Glutamate decarbo 99.1 2.4E-09 5.2E-14 104.5 17.8 183 124-307 94-300 (460)
302 PRK12389 glutamate-1-semialdeh 99.1 5.3E-09 1.1E-13 101.9 20.3 232 91-327 49-316 (428)
303 PRK11522 putrescine--2-oxoglut 99.1 3.3E-09 7.1E-14 104.0 18.7 233 91-327 78-348 (459)
304 PRK05355 3-phosphoserine/phosp 99.1 1E-09 2.2E-14 104.6 14.6 210 104-327 9-252 (360)
305 PRK04013 argD acetylornithine/ 99.1 1.5E-09 3.1E-14 103.4 15.0 221 92-327 21-271 (364)
306 PRK05769 4-aminobutyrate amino 99.1 4.2E-09 9.2E-14 102.9 18.6 233 91-327 50-334 (441)
307 PRK00615 glutamate-1-semialdeh 99.1 3.4E-09 7.3E-14 103.2 17.1 232 91-327 49-317 (433)
308 PRK12403 putative aminotransfe 99.1 1.1E-08 2.3E-13 100.6 20.0 233 91-327 50-341 (460)
309 PLN02994 1-aminocyclopropane-1 99.1 4.1E-10 8.9E-15 93.9 8.3 86 93-181 41-152 (153)
310 PLN02760 4-aminobutyrate:pyruv 99.1 8E-09 1.7E-13 102.4 18.8 235 91-327 85-382 (504)
311 PRK15399 lysine decarboxylase 99.1 1.1E-08 2.3E-13 103.8 19.9 165 127-297 193-380 (713)
312 PLN02263 serine decarboxylase 99.1 6.4E-09 1.4E-13 101.1 17.3 172 133-305 137-322 (470)
313 PRK07046 aminotransferase; Val 99.1 2E-08 4.4E-13 98.4 21.0 225 91-327 71-339 (453)
314 PLN02482 glutamate-1-semialdeh 99.1 9.3E-09 2E-13 101.1 18.4 227 91-327 95-362 (474)
315 PRK15400 lysine decarboxylase 99.1 1E-08 2.2E-13 104.1 18.9 161 127-292 193-374 (714)
316 PRK06062 hypothetical protein; 99.1 1.5E-08 3.2E-13 99.4 19.3 233 91-327 49-331 (451)
317 COG1982 LdcC Arginine/lysine/o 99.0 1.3E-08 2.9E-13 99.6 18.4 168 127-298 68-246 (557)
318 PRK06105 aminotransferase; Pro 99.0 1.4E-08 3.1E-13 99.7 17.9 233 91-327 44-340 (460)
319 TIGR02407 ectoine_ectB diamino 99.0 1.2E-08 2.5E-13 99.1 16.8 233 91-326 31-307 (412)
320 PRK09264 diaminobutyrate--2-ox 99.0 1.1E-08 2.4E-13 99.6 16.4 232 91-326 35-311 (425)
321 KOG2862 Alanine-glyoxylate ami 99.0 2.5E-08 5.5E-13 89.9 17.1 199 106-310 25-231 (385)
322 PRK13360 omega amino acid--pyr 99.0 2.9E-08 6.4E-13 97.0 18.8 233 91-327 42-337 (442)
323 PRK06149 hypothetical protein; 99.0 2.4E-08 5.2E-13 106.4 19.4 234 91-327 581-860 (972)
324 TIGR01366 serC_3 phosphoserine 99.0 2.4E-08 5.2E-13 95.2 16.9 184 106-306 11-207 (361)
325 PRK05367 glycine dehydrogenase 99.0 4.9E-08 1.1E-12 102.9 20.1 168 132-304 545-728 (954)
326 PRK07678 aminotransferase; Val 98.9 4.7E-08 1E-12 95.8 17.8 232 91-327 43-334 (451)
327 PRK09221 beta alanine--pyruvat 98.9 5.8E-08 1.3E-12 95.0 18.2 233 91-327 45-340 (445)
328 PRK07482 hypothetical protein; 98.9 7.7E-08 1.7E-12 94.6 19.0 233 91-327 46-342 (461)
329 COG0160 GabT 4-aminobutyrate a 98.9 7.6E-08 1.7E-12 92.8 17.0 233 91-327 52-335 (447)
330 PRK06148 hypothetical protein; 98.9 6.3E-08 1.4E-12 103.4 18.1 236 91-327 620-900 (1013)
331 PRK07986 adenosylmethionine--8 98.9 1.1E-07 2.4E-12 92.6 18.2 233 91-327 39-325 (428)
332 COG0001 HemL Glutamate-1-semia 98.9 1.2E-07 2.7E-12 90.1 17.7 228 90-327 48-316 (432)
333 PRK07036 hypothetical protein; 98.9 7.8E-08 1.7E-12 94.7 17.0 233 91-327 47-343 (466)
334 PRK05965 hypothetical protein; 98.9 1.6E-07 3.5E-12 92.2 18.9 234 91-327 42-337 (459)
335 PRK06943 adenosylmethionine--8 98.9 1.3E-07 2.9E-12 92.7 18.0 233 91-327 50-343 (453)
336 KOG1357 Serine palmitoyltransf 98.9 3E-08 6.5E-13 93.4 12.5 193 108-310 155-371 (519)
337 PRK07480 putative aminotransfe 98.9 9.4E-08 2E-12 93.8 16.6 233 91-327 46-338 (456)
338 PRK06082 4-aminobutyrate amino 98.9 2.1E-07 4.5E-12 91.5 18.8 233 91-327 68-343 (459)
339 PRK06173 adenosylmethionine--8 98.8 2.9E-07 6.2E-12 89.7 19.4 233 91-327 40-327 (429)
340 PRK05639 4-aminobutyrate amino 98.8 3.4E-07 7.3E-12 89.9 20.0 233 91-327 49-335 (457)
341 PRK07481 hypothetical protein; 98.8 2.4E-07 5.2E-12 90.8 18.1 232 92-327 39-335 (449)
342 PRK05630 adenosylmethionine--8 98.8 3.5E-07 7.7E-12 88.9 18.9 233 91-327 36-322 (422)
343 PRK07030 adenosylmethionine--8 98.8 2.4E-07 5.2E-12 91.2 17.9 233 91-327 43-337 (466)
344 TIGR03799 NOD_PanD_pyr putativ 98.8 1.1E-07 2.3E-12 94.6 15.4 156 149-305 162-355 (522)
345 PRK06916 adenosylmethionine--8 98.8 2.9E-07 6.3E-12 90.5 18.1 233 91-327 52-346 (460)
346 PRK06917 hypothetical protein; 98.8 6.4E-07 1.4E-11 87.8 20.4 233 91-327 27-319 (447)
347 PRK07483 hypothetical protein; 98.8 6.9E-07 1.5E-11 87.4 20.3 233 91-327 26-319 (443)
348 PRK12566 glycine dehydrogenase 98.8 1.5E-07 3.3E-12 97.6 16.1 173 131-306 545-731 (954)
349 TIGR00508 bioA adenosylmethion 98.8 3.9E-07 8.5E-12 88.8 18.3 232 92-327 42-328 (427)
350 COG1921 SelA Selenocysteine sy 98.8 5.5E-07 1.2E-11 84.8 18.0 212 110-327 40-267 (395)
351 PRK08742 adenosylmethionine--8 98.7 6.4E-07 1.4E-11 88.3 18.1 233 91-327 60-358 (472)
352 PLN02880 tyrosine decarboxylas 98.7 1.1E-07 2.4E-12 94.0 12.7 166 133-299 126-322 (490)
353 PRK05367 glycine dehydrogenase 98.7 4E-07 8.6E-12 96.1 17.1 191 99-305 80-292 (954)
354 PRK06209 glutamate-1-semialdeh 98.7 3E-07 6.5E-12 89.8 14.6 224 91-327 44-304 (431)
355 TIGR01365 serC_2 phosphoserine 98.7 4.7E-07 1E-11 86.5 15.4 179 113-306 19-207 (374)
356 PF00202 Aminotran_3: Aminotra 98.7 4.1E-07 8.8E-12 86.0 13.3 231 93-327 14-291 (339)
357 PF00282 Pyridoxal_deC: Pyrido 98.7 3.2E-07 6.9E-12 87.8 12.7 166 133-299 83-277 (373)
358 PLN02590 probable tyrosine dec 98.6 6E-07 1.3E-11 89.4 14.7 166 133-299 174-370 (539)
359 KOG1404 Alanine-glyoxylate ami 98.6 6.7E-07 1.5E-11 83.1 13.8 235 91-327 46-327 (442)
360 PLN02414 glycine dehydrogenase 98.6 1.2E-06 2.5E-11 92.5 16.4 191 100-305 108-320 (993)
361 TIGR02617 tnaA_trp_ase tryptop 98.6 3.4E-06 7.3E-11 81.1 17.4 224 97-328 43-320 (467)
362 PRK06938 diaminobutyrate--2-ox 98.5 4E-06 8.7E-11 82.5 15.6 232 91-327 59-344 (464)
363 PLN02452 phosphoserine transam 98.5 3.3E-06 7.1E-11 80.5 14.4 192 97-306 8-221 (365)
364 PRK06931 diaminobutyrate--2-ox 98.5 8.3E-06 1.8E-10 80.2 17.7 232 91-327 54-338 (459)
365 COG3844 Kynureninase [Amino ac 98.5 3.7E-06 8E-11 76.7 13.2 163 132-305 79-250 (407)
366 TIGR00699 GABAtrns_euk 4-amino 98.4 4.9E-06 1.1E-10 81.7 13.8 230 91-327 54-363 (464)
367 PRK12462 phosphoserine aminotr 98.4 1.8E-05 4E-10 75.0 16.9 184 106-306 12-219 (364)
368 TIGR03811 tyr_de_CO2_Ent tyros 98.3 2.2E-05 4.9E-10 79.2 16.7 89 172-260 224-326 (608)
369 PF02347 GDC-P: Glycine cleava 98.2 1.4E-05 3.1E-10 76.9 11.7 189 100-303 70-281 (429)
370 COG1003 GcvP Glycine cleavage 98.2 2.5E-05 5.4E-10 73.9 12.3 177 121-302 93-290 (496)
371 PRK08297 L-lysine aminotransfe 98.2 0.00016 3.4E-09 70.9 18.1 227 93-327 43-340 (443)
372 PLN02974 adenosylmethionine-8- 98.1 9.6E-05 2.1E-09 77.1 17.0 229 96-327 366-706 (817)
373 COG0161 BioA Adenosylmethionin 98.1 8.9E-05 1.9E-09 71.5 15.6 233 93-327 42-335 (449)
374 KOG1358 Serine palmitoyltransf 98.1 2.4E-05 5.2E-10 73.0 10.8 200 93-302 92-320 (467)
375 TIGR00461 gcvP glycine dehydro 98.1 0.00012 2.6E-09 76.9 16.2 190 99-305 68-280 (939)
376 KOG1401 Acetylornithine aminot 97.9 0.0004 8.6E-09 65.4 15.0 240 90-333 51-332 (433)
377 TIGR03251 LAT_fam L-lysine 6-t 97.9 0.00065 1.4E-08 66.4 17.4 228 93-327 36-333 (431)
378 PF03841 SelA: L-seryl-tRNA se 97.9 1.3E-05 2.8E-10 75.0 4.7 187 133-327 51-257 (367)
379 KOG1402 Ornithine aminotransfe 97.8 0.00018 4E-09 65.9 10.1 226 90-327 54-322 (427)
380 COG0403 GcvP Glycine cleavage 97.7 0.0022 4.9E-08 60.9 16.6 193 99-303 79-295 (450)
381 KOG2467 Glycine/serine hydroxy 97.7 0.00025 5.4E-09 65.9 9.5 191 98-297 43-264 (477)
382 KOG1383 Glutamate decarboxylas 97.5 0.00062 1.3E-08 65.1 9.7 163 133-297 124-302 (491)
383 PF05889 SLA_LP_auto_ag: Solub 96.6 0.025 5.4E-07 53.8 11.4 165 141-308 68-248 (389)
384 KOG1403 Predicted alanine-glyo 96.6 0.0029 6.4E-08 57.5 4.9 101 226-327 217-326 (452)
385 PRK12566 glycine dehydrogenase 96.5 0.12 2.6E-06 54.8 16.3 190 98-304 82-293 (954)
386 COG3033 TnaA Tryptophanase [Am 96.2 0.037 8.1E-07 51.7 9.4 130 124-255 73-227 (471)
387 KOG0629 Glutamate decarboxylas 96.1 0.093 2E-06 50.1 11.9 165 135-300 147-337 (510)
388 KOG0628 Aromatic-L-amino-acid/ 95.1 0.24 5.2E-06 47.8 10.8 133 127-260 107-278 (511)
389 PLN02672 methionine S-methyltr 94.2 0.5 1.1E-05 51.1 11.7 182 127-321 424-641 (1082)
390 KOG2040 Glycine dehydrogenase 93.4 1.2 2.5E-05 45.1 11.7 153 130-288 579-748 (1001)
391 KOG3846 L-kynurenine hydrolase 93.1 0.29 6.3E-06 45.0 6.5 165 130-299 112-292 (465)
392 COG1932 SerC Phosphoserine ami 92.6 1.5 3.2E-05 41.4 10.7 164 131-308 52-223 (365)
393 KOG3843 Predicted serine hydro 84.0 4.9 0.00011 36.4 7.4 119 188-310 121-252 (432)
394 TIGR03590 PseG pseudaminic aci 79.7 17 0.00036 33.2 9.7 84 166-255 27-112 (279)
395 KOG2040 Glycine dehydrogenase 79.6 30 0.00065 35.5 11.7 186 101-303 124-331 (1001)
396 COG0031 CysK Cysteine synthase 74.4 23 0.00049 32.9 8.8 98 144-243 59-165 (300)
397 PRK08265 short chain dehydroge 68.8 67 0.0014 28.5 10.7 96 147-245 7-108 (261)
398 PF08247 ENOD40: ENOD40 protei 68.8 2 4.4E-05 19.4 0.3 10 12-21 3-12 (12)
399 COG2102 Predicted ATPases of P 66.3 94 0.002 27.5 11.1 154 148-316 3-176 (223)
400 TIGR00715 precor6x_red precorr 66.1 1E+02 0.0022 27.9 11.5 61 184-245 190-252 (256)
401 PF05368 NmrA: NmrA-like famil 60.0 59 0.0013 28.3 8.4 74 149-229 1-75 (233)
402 COG0373 HemA Glutamyl-tRNA red 59.3 95 0.002 30.3 10.1 58 140-198 171-230 (414)
403 KOG1405 4-aminobutyrate aminot 58.5 29 0.00064 32.9 6.2 84 207-296 255-351 (484)
404 PF02571 CbiJ: Precorrin-6x re 57.2 1.5E+02 0.0032 26.7 11.0 111 133-245 117-248 (249)
405 COG1088 RfbB dTDP-D-glucose 4, 56.0 23 0.00049 32.9 5.0 139 148-289 2-174 (340)
406 TIGR00262 trpA tryptophan synt 55.9 1.6E+02 0.0034 26.6 14.5 142 87-234 30-179 (256)
407 COG0505 CarA Carbamoylphosphat 53.4 70 0.0015 30.4 7.8 71 168-246 177-249 (368)
408 PRK06935 2-deoxy-D-gluconate 3 52.2 1.4E+02 0.0031 26.2 9.7 106 136-245 5-120 (258)
409 KOG1201 Hydroxysteroid 17-beta 51.1 43 0.00094 31.0 6.0 138 144-289 36-182 (300)
410 KOG2790 Phosphoserine aminotra 49.7 2.2E+02 0.0047 26.5 11.3 162 131-306 54-226 (370)
411 KOG1546 Metacaspase involved i 49.4 1.4E+02 0.003 28.1 8.9 104 132-259 88-208 (362)
412 PF01282 Ribosomal_S24e: Ribos 49.0 20 0.00044 26.5 3.0 26 127-152 11-36 (84)
413 PRK09189 uroporphyrinogen-III 48.7 1.5E+02 0.0032 26.1 9.1 86 141-228 91-180 (240)
414 PLN02591 tryptophan synthase 48.1 2.1E+02 0.0045 25.8 14.6 149 86-242 21-179 (250)
415 COG0816 Predicted endonuclease 47.6 38 0.00081 27.8 4.6 53 205-257 40-99 (141)
416 PRK06194 hypothetical protein; 46.5 2.1E+02 0.0047 25.4 10.3 96 147-245 7-112 (287)
417 CHL00200 trpA tryptophan synth 45.8 2.3E+02 0.0051 25.7 14.6 159 86-252 34-207 (263)
418 PRK07424 bifunctional sterol d 44.3 2.4E+02 0.0053 27.3 10.4 96 144-245 176-271 (406)
419 PRK06500 short chain dehydroge 43.7 1.7E+02 0.0038 25.2 8.8 53 147-199 7-59 (249)
420 PRK05872 short chain dehydroge 43.4 2.5E+02 0.0055 25.4 10.1 97 146-245 9-114 (296)
421 PF00290 Trp_syntA: Tryptophan 43.1 2.6E+02 0.0056 25.4 10.1 152 86-245 29-191 (259)
422 PRK07097 gluconate 5-dehydroge 41.7 2.5E+02 0.0053 24.8 10.0 100 143-245 7-116 (265)
423 KOG4589 Cell division protein 41.2 1.6E+02 0.0034 25.6 7.4 38 208-245 126-164 (232)
424 COG0514 RecQ Superfamily II DN 40.0 95 0.0021 31.7 7.0 96 149-257 38-142 (590)
425 COG1587 HemD Uroporphyrinogen- 39.6 2.5E+02 0.0054 24.9 9.2 79 149-227 102-184 (248)
426 PF00106 adh_short: short chai 39.1 2E+02 0.0044 23.0 9.1 138 149-299 3-153 (167)
427 COG2004 RPS24A Ribosomal prote 38.8 39 0.00085 26.2 3.2 26 127-152 30-55 (107)
428 cd05013 SIS_RpiR RpiR-like pro 38.7 1.8E+02 0.0039 22.4 7.7 16 149-164 17-32 (139)
429 PRK12481 2-deoxy-D-gluconate 3 37.6 2.8E+02 0.0061 24.3 10.2 97 147-246 9-113 (251)
430 PRK06139 short chain dehydroge 37.6 2.3E+02 0.005 26.4 9.0 96 147-245 8-113 (330)
431 PRK07067 sorbitol dehydrogenas 37.1 2.8E+02 0.0062 24.1 10.3 76 147-225 7-87 (257)
432 PLN02556 cysteine synthase/L-3 37.0 1.5E+02 0.0033 28.3 7.7 83 148-232 113-197 (368)
433 PRK07024 short chain dehydroge 37.0 2.9E+02 0.0062 24.2 10.2 33 148-180 4-36 (257)
434 cd06578 HemD Uroporphyrinogen- 36.6 2E+02 0.0043 24.7 8.0 77 153-229 105-184 (239)
435 PRK12936 3-ketoacyl-(acyl-carr 36.5 2.7E+02 0.006 23.8 10.5 77 147-226 7-88 (245)
436 cd06448 L-Ser-dehyd Serine deh 35.8 2.9E+02 0.0063 25.6 9.3 84 147-232 52-136 (316)
437 PF12846 AAA_10: AAA-like doma 35.8 1E+02 0.0022 27.6 6.1 49 152-201 11-59 (304)
438 PRK07231 fabG 3-ketoacyl-(acyl 35.5 2.9E+02 0.0063 23.8 9.4 78 147-227 6-90 (251)
439 TIGR03089 conserved hypothetic 35.4 1.4E+02 0.0031 26.1 6.8 65 148-218 154-225 (227)
440 PLN03013 cysteine synthase 34.8 2E+02 0.0043 28.2 8.1 83 148-231 177-260 (429)
441 TIGR00290 MJ0570_dom MJ0570-re 34.4 3.3E+02 0.0071 24.1 9.2 148 149-312 4-171 (223)
442 PRK06482 short chain dehydroge 33.9 3.3E+02 0.0072 24.0 9.7 75 148-225 4-83 (276)
443 PRK08339 short chain dehydroge 33.8 3.4E+02 0.0073 24.0 9.6 32 148-179 10-41 (263)
444 PF05127 Helicase_RecD: Helica 33.6 22 0.00048 30.3 1.2 118 152-283 7-125 (177)
445 PRK08263 short chain dehydroge 33.5 3.4E+02 0.0074 24.0 9.8 75 148-225 5-84 (275)
446 PRK08589 short chain dehydroge 33.3 3.5E+02 0.0075 24.0 10.2 94 147-244 7-111 (272)
447 PRK08057 cobalt-precorrin-6x r 32.9 3.7E+02 0.0079 24.2 10.9 96 147-245 128-244 (248)
448 PRK05928 hemD uroporphyrinogen 32.9 2.3E+02 0.005 24.6 7.8 87 142-229 98-188 (249)
449 PRK06114 short chain dehydroge 32.5 3.4E+02 0.0073 23.7 10.2 100 143-245 5-115 (254)
450 PF13552 DUF4127: Protein of u 32.4 4.7E+02 0.01 26.2 10.5 33 133-167 216-248 (497)
451 TIGR03325 BphB_TodD cis-2,3-di 32.1 2.5E+02 0.0055 24.6 8.0 52 147-198 6-57 (262)
452 PRK00109 Holliday junction res 32.0 1.4E+02 0.0029 24.3 5.6 54 204-257 40-100 (138)
453 CHL00197 carA carbamoyl-phosph 31.9 2.2E+02 0.0048 27.4 7.9 67 170-244 192-260 (382)
454 cd05014 SIS_Kpsf KpsF-like pro 31.7 2.2E+02 0.0048 21.9 6.8 16 150-165 5-20 (128)
455 PRK06484 short chain dehydroge 31.7 3.5E+02 0.0075 26.7 9.7 96 148-246 271-374 (520)
456 PRK08057 cobalt-precorrin-6x r 31.6 1.4E+02 0.0031 26.8 6.2 67 147-224 3-71 (248)
457 PRK08197 threonine synthase; V 31.3 4.8E+02 0.01 25.0 10.8 103 97-199 72-181 (394)
458 PRK06079 enoyl-(acyl carrier p 31.0 3.3E+02 0.0071 23.9 8.5 31 147-177 8-40 (252)
459 PRK01178 rps24e 30S ribosomal 31.0 61 0.0013 24.8 3.1 26 127-152 29-54 (99)
460 PRK06182 short chain dehydroge 31.0 3.7E+02 0.0081 23.7 9.4 74 148-227 5-83 (273)
461 PRK07239 bifunctional uroporph 30.9 2.5E+02 0.0053 26.8 8.1 87 142-229 115-212 (381)
462 cd00758 MoCF_BD MoCF_BD: molyb 30.6 1.9E+02 0.0041 22.9 6.3 62 180-244 21-84 (133)
463 PRK11337 DNA-binding transcrip 30.1 3.1E+02 0.0067 24.9 8.4 13 150-162 145-157 (292)
464 PLN02565 cysteine synthase 30.1 2.6E+02 0.0056 26.1 7.9 51 149-199 70-121 (322)
465 PRK12564 carbamoyl phosphate s 30.1 2.9E+02 0.0063 26.4 8.3 56 170-233 177-234 (360)
466 PRK06841 short chain dehydroge 30.0 3.7E+02 0.008 23.3 9.9 79 144-225 13-96 (255)
467 KOG3424 40S ribosomal protein 29.9 69 0.0015 25.3 3.3 25 127-151 33-57 (132)
468 PRK05867 short chain dehydroge 29.6 3.8E+02 0.0082 23.3 10.2 97 146-245 9-115 (253)
469 PRK07063 short chain dehydroge 29.3 3.9E+02 0.0083 23.3 10.8 96 147-245 8-115 (260)
470 PRK08862 short chain dehydroge 29.2 2.2E+02 0.0048 24.7 7.0 65 147-214 6-73 (227)
471 PRK06484 short chain dehydroge 29.1 4.4E+02 0.0096 26.0 9.9 75 148-225 7-86 (520)
472 PF02571 CbiJ: Precorrin-6x re 29.0 1.7E+02 0.0037 26.4 6.2 79 148-239 2-85 (249)
473 COG1087 GalE UDP-glucose 4-epi 27.9 2.2E+02 0.0048 26.7 6.7 71 148-223 2-72 (329)
474 TIGR00715 precor6x_red precorr 27.2 2E+02 0.0043 26.0 6.4 70 148-225 2-72 (256)
475 PLN00011 cysteine synthase 27.1 2.9E+02 0.0062 25.7 7.7 53 147-199 70-123 (323)
476 cd06409 PB1_MUG70 The MUG70 pr 27.1 1.1E+02 0.0024 22.7 3.9 62 127-197 19-81 (86)
477 PF07179 SseB: SseB protein N- 27.1 1.5E+02 0.0032 22.7 5.0 65 169-243 60-124 (124)
478 PRK08063 enoyl-(acyl carrier p 26.9 3.3E+02 0.0071 23.5 7.8 76 148-226 6-90 (250)
479 PRK07523 gluconate 5-dehydroge 26.8 4.2E+02 0.0092 23.0 10.7 78 145-225 9-94 (255)
480 KOG1200 Mitochondrial/plastidi 26.7 3E+02 0.0065 24.2 6.8 98 149-246 17-120 (256)
481 cd00954 NAL N-Acetylneuraminic 26.6 4.1E+02 0.0089 24.2 8.5 36 219-255 129-165 (288)
482 PRK10892 D-arabinose 5-phospha 26.6 3.9E+02 0.0084 24.7 8.5 16 217-232 120-136 (326)
483 PF01408 GFO_IDH_MocA: Oxidore 26.6 2.8E+02 0.0061 20.9 9.0 90 150-256 5-95 (120)
484 PRK06483 dihydromonapterin red 26.5 4.1E+02 0.0089 22.7 10.0 93 148-245 4-103 (236)
485 COG0552 FtsY Signal recognitio 26.5 3.1E+02 0.0068 25.9 7.5 101 152-257 149-270 (340)
486 PRK11557 putative DNA-binding 26.5 4.7E+02 0.01 23.4 9.5 17 148-164 130-147 (278)
487 cd01561 CBS_like CBS_like: Thi 26.3 3.2E+02 0.0069 24.8 7.7 53 147-199 54-107 (291)
488 PRK05717 oxidoreductase; Valid 26.2 4.4E+02 0.0094 22.9 10.7 76 147-225 11-91 (255)
489 TIGR00683 nanA N-acetylneurami 26.2 3.9E+02 0.0085 24.4 8.3 36 218-254 128-164 (290)
490 PRK05876 short chain dehydroge 25.9 4.8E+02 0.01 23.3 9.8 96 147-245 7-112 (275)
491 PRK11889 flhF flagellar biosyn 25.8 3.3E+02 0.0072 26.7 7.8 99 152-257 251-363 (436)
492 TIGR00250 RNAse_H_YqgF RNAse H 25.7 1.8E+02 0.0039 23.3 5.2 54 204-257 34-94 (130)
493 cd00640 Trp-synth-beta_II Tryp 25.4 3.1E+02 0.0066 24.1 7.3 52 147-199 51-104 (244)
494 PRK07666 fabG 3-ketoacyl-(acyl 25.3 4.3E+02 0.0094 22.6 10.2 80 148-230 9-96 (239)
495 cd01563 Thr-synth_1 Threonine 25.1 5.5E+02 0.012 23.7 11.4 54 146-199 70-124 (324)
496 cd08073 MPN_NLPC_P60 Mpr1p, Pa 25.0 2.2E+02 0.0048 21.9 5.5 51 201-253 43-94 (108)
497 cd00886 MogA_MoaB MogA_MoaB fa 24.9 2.9E+02 0.0064 22.5 6.5 62 182-246 24-89 (152)
498 PF13460 NAD_binding_10: NADH( 24.9 3.6E+02 0.0079 22.0 7.3 70 149-228 1-70 (183)
499 PRK08278 short chain dehydroge 24.8 4.9E+02 0.011 23.0 10.1 76 147-225 7-97 (273)
500 PRK06128 oxidoreductase; Provi 24.3 5.1E+02 0.011 23.4 8.8 96 147-245 56-164 (300)
No 1
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-47 Score=363.31 Aligned_cols=285 Identities=81% Similarity=1.304 Sum_probs=251.1
Q ss_pred hcCcccccchhhhhccCCCChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCC
Q 019868 45 SSTLPVEQQVNEGQRRLTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPY 124 (334)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~ 124 (334)
.++++|... +..++..+++++.+.++.++.+...+...+++++..+.++|+|+.|+|+++++|.+.+++.+....+
T Consensus 6 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~n~~p~~~~~~v~~a~~~~~~~~ 81 (380)
T PLN03026 6 SSATAMSEV----KQSTSGDSFIRKHILQLAPYQPILPFEVLSAQLGRKPEDIVKLDANENPYGPPPEVLEALGNMKFPY 81 (380)
T ss_pred cchhhhhhc----cccccHhHHhhHHhhcCCCCCCCCChHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHhhHhhc
Confidence 344454443 2345677788999999999877777888888888777889999999999999999999987643346
Q ss_pred CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCC
Q 019868 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (334)
Q Consensus 125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~ 204 (334)
.||+++..+||+++|+++++++++|++|+|+++++..++..++++||+|++++|+|+.|...++..|++++.++.+++|.
T Consensus 82 ~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 161 (380)
T PLN03026 82 VYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFS 161 (380)
T ss_pred cCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCC
Confidence 68988889999999999999999999999999999999999999999999999999999999999999999999777789
Q ss_pred CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh
Q 019868 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (334)
Q Consensus 205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (334)
+|++++++.+..+++++|++|+||||||.+++.+++++|++..+++|+||+|.+|.+.++....+...+|+++++||||.
T Consensus 162 ~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~ 241 (380)
T PLN03026 162 LDVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKR 241 (380)
T ss_pred cCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHh
Confidence 99999999984468999999999999999999999999998778999999999998655444555567899999999999
Q ss_pred hcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 285 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 285 ~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
||++|+|+||+++++++++.+.+.+.+++++.++|.++.++|++.+|++
T Consensus 242 ~glaGlRiGy~~~~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~ 290 (380)
T PLN03026 242 AGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLE 290 (380)
T ss_pred hcCccccceeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHH
Confidence 9999999999999999999999998889999999999999999877754
No 2
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-47 Score=360.08 Aligned_cols=255 Identities=50% Similarity=0.795 Sum_probs=230.8
Q ss_pred HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcC-CC
Q 019868 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSG-LE 145 (334)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~-~~ 145 (334)
++.+.++.+|.++ ++++|.+ ++++|+.|+||+++|+.+.++++. +...++||++...+++++++++++ ++
T Consensus 3 ~~~i~~l~~y~~~------~~~~g~~--~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~~~~~l~~a~a~~~~~~~ 74 (356)
T COG0079 3 RPLVRDLPPYVPG------ARQYGLP--GIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDPDYRELRAALAEYYGVVD 74 (356)
T ss_pred chhhhhccCCCCc------ccccCCc--cceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCCCC
Confidence 4566777777653 2333333 689999999999999999998876 455689999999999999999999 88
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
+++|++++|++++|..++++++.+||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+. +++++|++|
T Consensus 75 ~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~-~~~~lv~i~ 152 (356)
T COG0079 75 PENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIR-DKTKLVFLC 152 (356)
T ss_pred cceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHHHHHHhhh-cCCCEEEEe
Confidence 89999999999999999999999999999999999999999999999999999877 9999999999998 489999999
Q ss_pred CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
|||||||..++.++++++++. +.+||+||+|.+|.. ++....+..++|+++++||||.||++|+|+||++++++++
T Consensus 153 nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~-~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 153 NPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP-ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC-chhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence 999999999999999999986 789999999999997 4555555567889999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 303 EYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 303 ~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
+.+.+.+.+|++|.++++++.++|++.+|++
T Consensus 232 ~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~ 262 (356)
T COG0079 232 AALNKVRPPFNVSSPALAAAIAALRDADYLE 262 (356)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHcccHHHHH
Confidence 9999999999999999999999999988765
No 3
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=8.1e-45 Score=346.00 Aligned_cols=262 Identities=35% Similarity=0.588 Sum_probs=225.5
Q ss_pred HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCC
Q 019868 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLES 146 (334)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~ 146 (334)
+..+..+.+|.+......+.+.++ ..++|+|+.|+|++++++.+++++.+ +.....||+.|..+||+++|+++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~g~~~Lr~aia~~~~~~~ 81 (366)
T PRK01533 4 KDQLSSLQPYKPGKSPEQMKEVYG--DHSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDGGATTLRQTIANKLHVKM 81 (366)
T ss_pred hhhhhcCCCCCCCCChHHHHHhcC--CCceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCCCHHHHHHHHHHHhCCCc
Confidence 345566666655444433444433 35789999999999999999998875 333456898899999999999999999
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~ 226 (334)
++|++|+|+++++..++.+++++||+|++++|+|+.|...++..|++++.++.+ ++.+|+++++++++ ++++++++|+
T Consensus 82 ~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~-~~~~~v~i~~ 159 (366)
T PRK01533 82 EQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NGVYDLDEISSVVD-NDTKIVWICN 159 (366)
T ss_pred ceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhC-cCCcEEEEeC
Confidence 999999999999999999999999999999999999999999999999999974 45799999999886 5789999999
Q ss_pred CCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC---CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 227 PNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 227 p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
||||||.+++.+++++|++. +.++|+||+|.+|.+.. +....+...+++++++||||.||++|+|+||++++++
T Consensus 160 P~NPTG~~~~~~~l~~l~~~~~~~~~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~ 239 (366)
T PRK01533 160 PNNPTGTYVNDRKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEE 239 (366)
T ss_pred CCCCCCCCcCHHHHHHHHHhCCCCCEEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHH
Confidence 99999999999999999985 56788999999887543 2334445578999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 301 IIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 301 ~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
+++.+.+.+..+++|.++|.++.++|++++|.+
T Consensus 240 ~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~ 272 (366)
T PRK01533 240 LIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIE 272 (366)
T ss_pred HHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHH
Confidence 999999988889999999999999999887764
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-44 Score=345.85 Aligned_cols=234 Identities=31% Similarity=0.491 Sum_probs=207.9
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhc----C--CCCCC-EEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDS----G--LESDH-ILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~----~--~~~~~-I~~t~G~~~~i~~~~~ 164 (334)
.++|+|++|++++++|+.+++++.+ +..+ ++||..|.++||+++|+++ + +++++ |++|+|+++++..++.
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~ 107 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFL 107 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHH
Confidence 6899999999999999999988776 4433 3347889999999999986 3 56665 9999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
++++|||+|++++|.|+.|...+..+|++++.++.. ++|.+|++.++++++ +++|+|+||+||||||.++++++++
T Consensus 108 a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~-~ktk~i~ln~P~NPTGav~~~~~l~ 186 (393)
T COG0436 108 ALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAIT-PKTKAIILNSPNNPTGAVYSKEELK 186 (393)
T ss_pred HhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcC-ccceEEEEeCCCCCcCcCCCHHHHH
Confidence 999999999999999999999999999999999953 489999999999998 4999999999999999999999999
Q ss_pred HHHhC----CCeEEEccCCcCccCCCC-chhhh--c-CCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC-
Q 019868 242 KILEM----PILVVLDEAYTEFSGLES-RMEWV--K-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP- 311 (334)
Q Consensus 242 ~l~~~----~~~lIvDeay~~~~~~~~-~~~~~--~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~- 311 (334)
+|++. +++||+||+|.++.+++. ..... . ..+++|+++||||.|+|+|||+||++++ +++++.+.+++..
T Consensus 187 ~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~ 266 (393)
T COG0436 187 AIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYL 266 (393)
T ss_pred HHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhc
Confidence 99986 999999999999998763 33222 2 2478999999999999999999999998 8899998877766
Q ss_pred -CCCcHHHHHHHHHHhcCc
Q 019868 312 -YNVSVAAEVAACAALQNP 329 (334)
Q Consensus 312 -~~~~~~~q~aa~~~L~~~ 329 (334)
++++.+.|.++.++|+++
T Consensus 267 ~~~~~~~~Q~aa~~aL~~~ 285 (393)
T COG0436 267 TSCAPTPAQYAAIAALNGP 285 (393)
T ss_pred ccCCCHHHHHHHHHHhcCc
Confidence 589999999999999986
No 5
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-43 Score=334.97 Aligned_cols=261 Identities=35% Similarity=0.544 Sum_probs=227.0
Q ss_pred hhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCE
Q 019868 71 LRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHI 149 (334)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I 149 (334)
+....++.++..+..++++++..+.++|+|+.|++++++++.+.+++.+ ......||+.+..+||+++|+++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I 85 (357)
T PRK14809 6 LSDHVAYRAGRGIEEVARELGLDPDDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKASHADLTAALADRWDVSPEQV 85 (357)
T ss_pred hhcCCCcCCCCCHHHHHHHhCCCccceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHHhCCCcceE
Confidence 4444555456667778888887778899999999999999999888875 334467888889999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 150 ~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
++|+|+++++..++++++++||+|++++|+|..|...+...|++++.++. ++++.+|++++++... ++|+|++|||
T Consensus 86 ~it~G~~~al~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~--~~k~i~l~~p 163 (357)
T PRK14809 86 WLANGGDGALDYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD--GERIVYLTSP 163 (357)
T ss_pred EECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc--CCcEEEEeCC
Confidence 99999999999999999999999999999999999888889999998885 3467888888877653 5799999999
Q ss_pred CCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868 228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (334)
Q Consensus 228 ~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~ 304 (334)
|||||.+++.+++++|++. +++||+||+|.+|.+.++........+++++++||||.||++|+|+||+++++++++.
T Consensus 164 ~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~ 243 (357)
T PRK14809 164 HNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADA 243 (357)
T ss_pred CCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHH
Confidence 9999999999999999986 7899999999999875544444455689999999999999999999999999999999
Q ss_pred HHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 305 LWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 305 l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
+.+...+++++.++|.++.++|++++|++
T Consensus 244 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 272 (357)
T PRK14809 244 YARVNTPFAASELACRAGLAALDDDEHVE 272 (357)
T ss_pred HHHhCCCCCCCHHHHHHHHHHhCCHHHHH
Confidence 99988888999999999999998877654
No 6
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-42 Score=327.67 Aligned_cols=249 Identities=34% Similarity=0.580 Sum_probs=216.8
Q ss_pred hHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCC
Q 019868 65 SFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGL 144 (334)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~ 144 (334)
...+..+..+.+|.+.... .+...++|+.|+|++++++.+ .....++||+....+|++++++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~Nenp~~~~~~~-----~~~~~~~Yp~~~~~~l~~~~a~~~g~ 72 (351)
T PRK01688 7 DLARENVRALTPYQSARRL---------GGNGDVWLNANEYPTAVEFQL-----TQQTLNRYPECQPKAVIENYAAYAGV 72 (351)
T ss_pred HHhhHHhhcCCCCCCCCcc---------CCCCceEecCCCCCCCCChhh-----cccccccCCCCChHHHHHHHHHHhCC
Confidence 4456677777777542211 123469999999999998764 11234779998889999999999999
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868 145 ESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (334)
Q Consensus 145 ~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~ 223 (334)
++++|++|+|+++++.+++++++++| |+|++++|+|..|...++..|++++.++.+++|.+|++++++++ .++++|+
T Consensus 73 ~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~~--~~~~lv~ 150 (351)
T PRK01688 73 KPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLDLPAIADNL--DGVKVVY 150 (351)
T ss_pred CHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHHhc--cCCcEEE
Confidence 99999999999999999999999997 99999999999999999999999999998777999999999987 3789999
Q ss_pred EeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 224 LTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+||||||||.+++.+++++|++. +.+||+||+|.+|....+....+..++|+++++||||.||++|+|+||++++++
T Consensus 151 l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~ 230 (351)
T PRK01688 151 VCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEE 230 (351)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHH
Confidence 99999999999999999999975 689999999999985545555566678999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868 301 IIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (334)
Q Consensus 301 ~i~~l~~~~~~~~~~~~~q~aa~~~L~~~ 329 (334)
+++.+.+...+|+++.++|.++.++|++.
T Consensus 231 ~i~~l~~~~~~~~v~~~~~~~a~~~L~~~ 259 (351)
T PRK01688 231 VINLLLKVIAPYPLSTPVADIAAQALSPQ 259 (351)
T ss_pred HHHHHHhccCCCCCCHHHHHHHHHHHhcc
Confidence 99999999989999999999999999874
No 7
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-42 Score=326.66 Aligned_cols=261 Identities=43% Similarity=0.711 Sum_probs=225.6
Q ss_pred HHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCC
Q 019868 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD 147 (334)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~ 147 (334)
+++..+.++.+.......+++++.+ ++++|+.|++++++++.+.+++.+ +.....||+.|..++|+++|++++++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~g~~~lr~~ia~~~~~~~~ 82 (359)
T PRK03158 5 EQLNQLSAYQPGKSIEEVKREYGLE--KIVKLASNENPYGPSPKVKEAIAAHLDELALYPDGYAPELRTKVAKHLGVDEE 82 (359)
T ss_pred hhhhccCCCCCCCCHHHHHHhcCCC--ceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCCCHH
Confidence 4455566665544455556666543 789999999999999999998876 3333456888999999999999999999
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
+|++|+|+++++..++++++++||+|++++|+|+.|...+...|++++.++.+ ++.+|++.+++.++ ++++++++++|
T Consensus 83 ~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~-~~~~~v~i~~p 160 (359)
T PRK03158 83 QLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-DGGHDLEAMLKAID-EQTKIVWICNP 160 (359)
T ss_pred HEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcC-CCCCEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999975 67899999999886 58899999999
Q ss_pred CCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC---CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 228 NNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 228 ~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
|||||.+++.+++.++++. ++++|+||+|.+|.+++ ......+..+++++++||||.||++|+|+||+++++++
T Consensus 161 ~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~ 240 (359)
T PRK03158 161 NNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEEL 240 (359)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHH
Confidence 9999999999999999975 89999999999987543 22344456789999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 302 IEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 302 i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
++.+.+....+++|.++|.++.++|++.+|++
T Consensus 241 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 272 (359)
T PRK03158 241 IEKLNIARPPFNTTRIAQYAAIAALEDQAFLK 272 (359)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHH
Confidence 99999988889999999999999999877754
No 8
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=2.4e-41 Score=322.65 Aligned_cols=236 Identities=31% Similarity=0.471 Sum_probs=209.3
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V 173 (334)
++.++|+.|++++++|+.+.+++.+ ......||..+..+||+++++++++++++|++|+|+++++..++..++++||+|
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~V 122 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSGRYDLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGL 122 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEE
Confidence 5679999999999999999998875 333356887778999999999999999999999999999999999999999999
Q ss_pred EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeE
Q 019868 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV 250 (334)
Q Consensus 174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~l 250 (334)
++++|+|+.|...++..|++++.++.++++.+|++++++.. ++++++++||||||||.+++.++++++++. ++++
T Consensus 123 li~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~l 200 (370)
T PRK09105 123 VTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKAMLAAD--PNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVL 200 (370)
T ss_pred EEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHHHHhcC--CCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEE
Confidence 99999999999999999999999997777889999998863 468999999999999999999999999875 7999
Q ss_pred EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~ 330 (334)
|+||+|.+|....+.....+..+++++++||||.||++|+|+||+++++++++.+.+. ..++++.++|.++.++|++++
T Consensus 201 IvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~~~~~~~~~~aa~~~L~~~~ 279 (370)
T PRK09105 201 LVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GHNPLPVPAAAAGLASLRDPK 279 (370)
T ss_pred EEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-CCCCcCHHHHHHHHHHHhCHH
Confidence 9999998886543334444457899999999999999999999999999999999877 556789999999999999877
Q ss_pred hhc
Q 019868 331 YLE 333 (334)
Q Consensus 331 ~~~ 333 (334)
|++
T Consensus 280 ~~~ 282 (370)
T PRK09105 280 LVP 282 (370)
T ss_pred HHH
Confidence 754
No 9
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-41 Score=321.90 Aligned_cols=234 Identities=33% Similarity=0.534 Sum_probs=206.9
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhc-CcC---CCCCCCcChHHHHHHHHHhcC--------CCCCCEEEeCCHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQ-LKF---PYIYPDPESRRLRAALAKDSG--------LESDHILVGCGADELIDLIM 163 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~---~~~Yp~~g~~~lr~~lA~~~~--------~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+++|+.|++++++|+.+.+++.+ +.. ..+||+.|..+||+++|++++ +++++|++|+|+++++..++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~ 108 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLL 108 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHH
Confidence 479999999999999999999875 222 256888899999999999986 78899999999999999888
Q ss_pred HHhcCCCC-EEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868 164 RCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 164 ~~l~~~gd-~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
.+++.+|| +|++++|+|..|...++..|++++.++.++ ++++|++++++++++ .++|+|++|+||||||.+++.+
T Consensus 109 ~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~ 188 (374)
T PRK02610 109 IATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAA 188 (374)
T ss_pred HHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHH
Confidence 88888886 899999999999999999999999999644 589999999998864 5899999999999999999999
Q ss_pred HHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcH
Q 019868 239 DLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSV 316 (334)
Q Consensus 239 ~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~ 316 (334)
+++++++. +++||+||+|.+|.+. .....+...+++++++||||.||++|+|+||+++++++++.+.+.+..++++.
T Consensus 189 ~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~ 267 (374)
T PRK02610 189 ELEWLRSLPEDILVVIDEAYFEFSQT-TLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPS 267 (374)
T ss_pred HHHHHHhccCCcEEEEeccccccCcc-chHHHHhcCCCEEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCH
Confidence 99999876 7999999999998753 22333445678999999999999999999999999999999999887889999
Q ss_pred HHHHHHHHHhcCch
Q 019868 317 AAEVAACAALQNPI 330 (334)
Q Consensus 317 ~~q~aa~~~L~~~~ 330 (334)
++|.++..+|++.+
T Consensus 268 ~~q~a~~~~l~~~~ 281 (374)
T PRK02610 268 FSQLAAQLALEHRQ 281 (374)
T ss_pred HHHHHHHHHhcCHH
Confidence 99999999998853
No 10
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=9.6e-41 Score=317.43 Aligned_cols=251 Identities=30% Similarity=0.434 Sum_probs=213.1
Q ss_pred CCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHH
Q 019868 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158 (334)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~ 158 (334)
+..+...+...+....++|+|+.|+|++++|+.+.+++.+ +.....||+++..+||+++|+++++++++|++|+|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~ 86 (360)
T PRK07392 7 GGNLAWAAAIAGCPPDAILDFSASINPLGPPESVIAAIQSALSALRHYPDPDYRELRLALAQHHQLPPEWILPGNGAAEL 86 (360)
T ss_pred CccHHHHHHHcCCCcccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCcCHHHHHHHHHHHhCcChhhEEECCCHHHH
Confidence 4455555666777777899999999999999999998875 334567887777899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCC-----CCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS-----LNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~-----~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
|.++++++ .+||+|++++|+|..|...++..|++++.++.+.+.. .|++.+++.. .++++++++|||||||.
T Consensus 87 i~~~~~~l-~~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~nP~NPTG~ 163 (360)
T PRK07392 87 LTWAGREL-AQLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL--TPNDGLLLNNPHNPTGK 163 (360)
T ss_pred HHHHHHHh-CCCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc--cCCCEEEEeCCCCCCCC
Confidence 99999975 4789999999999999999999999999999654332 4677776654 36799999999999999
Q ss_pred CCcHHHHHHHHhCCCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868 234 IINDEDLLKILEMPILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 234 ~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~ 310 (334)
+++++++.++++...++|+||+|.+|.+++. ....+...+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus 164 ~~~~~~l~~l~~~~~~~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~ 243 (360)
T PRK07392 164 LWSREAILPLLEQFALVVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRD 243 (360)
T ss_pred CcCHHHHHHHHHHCCEEEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCC
Confidence 9999999999988335777999999986432 2334455689999999999999999999999999999999988887
Q ss_pred CCCCcHHHHHHHHHHhcCchhhc
Q 019868 311 PYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 311 ~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
.++++.++|.++.++|++.+|.+
T Consensus 244 ~~~~s~~~q~~~~~~l~~~~~~~ 266 (360)
T PRK07392 244 PWPVNGLAAAAAIAALADRDFQQ 266 (360)
T ss_pred CCCCCHHHHHHHHHHhccHHHHH
Confidence 78999999999999999876653
No 11
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-41 Score=318.61 Aligned_cols=264 Identities=38% Similarity=0.674 Sum_probs=224.1
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCcChHHHHHHHHHhcCCC
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLE 145 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~g~~~lr~~lA~~~~~~ 145 (334)
++..+..+.++.+.....+.+.+++ +.++|+|+.|+|++++++.+.+++.+. .....||+....+||+++|++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~~g~~lr~~ia~~~~~~ 87 (371)
T PRK05166 10 ARAEVRPLPPYNAGLTIEEVRARYG--VPRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDPQGRALREAIAARTGVP 87 (371)
T ss_pred hhHHHhcCCCCCCCCCHHHHHHhcC--CcceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHhCcC
Confidence 4456666777766665555555554 457899999999999999999988763 3346787764359999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
+++|++|+|+++++..++.+++++||+|+++.|+|+.+...++..|++++.++.++++++|++++++.++ +++++++++
T Consensus 88 ~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~ 166 (371)
T PRK05166 88 ADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLDALCAAVA-RAPRMLMFS 166 (371)
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhh-cCCCEEEEe
Confidence 9999999999999999999999999999999999999999999999999999987778999999999886 578999999
Q ss_pred CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEc-
Q 019868 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF- 297 (334)
Q Consensus 226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~- 297 (334)
|||||||.+++.+++++|++. ++++|+||+|.+|.++.. ...... ..+++++++||||.||++|+|+||+++
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~ 246 (371)
T PRK05166 167 NPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVS 246 (371)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecC
Confidence 999999999999999999986 789999999999985432 222232 346899999999999999999999876
Q ss_pred CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 298 PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 298 ~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
++++++.+.+.+..++++.++|.++.++|.+.+|++
T Consensus 247 ~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 282 (371)
T PRK05166 247 DPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLA 282 (371)
T ss_pred CHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHH
Confidence 788999988888788999999999999998877654
No 12
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.7e-41 Score=318.80 Aligned_cols=237 Identities=35% Similarity=0.554 Sum_probs=210.2
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl 174 (334)
..++|+.|++++++++.+.+++.+ ......||+++..+||+++|+++++++++|++|+|+++++..++..++++||.|+
T Consensus 33 ~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vl 112 (369)
T PRK08153 33 FRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVV 112 (369)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEE
Confidence 347999999999999999998875 3333678877789999999999999999999999999999999999999999999
Q ss_pred EcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEE
Q 019868 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVV 251 (334)
Q Consensus 175 ~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lI 251 (334)
+++|+|+.|...+...|++++.+|.+++ .+|++++++.+...++++|++++||||||.+++.++++++++. +++||
T Consensus 113 v~~p~y~~~~~~~~~~g~~~~~vp~~~~-~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI 191 (369)
T PRK08153 113 TSLGAYPTFNYHVAGFGGRLVTVPYRDD-REDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLV 191 (369)
T ss_pred ECCCcchHHHHHHHHcCCeEEEeeCCCC-CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEE
Confidence 9999999999888899999999997444 6899999887765689999999999999999999999999975 78999
Q ss_pred EccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (334)
Q Consensus 252 vDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~ 331 (334)
+||+|.+|.+++.........+++++++||||.||++|+|+||+++++++++.+.+.+..++++.++|.++.++|++++|
T Consensus 192 ~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~ 271 (369)
T PRK08153 192 LDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAY 271 (369)
T ss_pred EeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHH
Confidence 99999999865433333334678999999999999999999999999999999998888899999999999999998777
Q ss_pred hc
Q 019868 332 LE 333 (334)
Q Consensus 332 ~~ 333 (334)
++
T Consensus 272 ~~ 273 (369)
T PRK08153 272 LA 273 (369)
T ss_pred HH
Confidence 64
No 13
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=313.86 Aligned_cols=234 Identities=42% Similarity=0.662 Sum_probs=207.6
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd 171 (334)
.+.|+|+.|++++++++.+.+++.+ +. ...+||+.|.++||+++|+++++++++|++|+|+++++..++..+ +||
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~gd 95 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF--EGK 95 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh--CCC
Confidence 3679999999999999999888765 32 236788889999999999999999999999999999999988865 799
Q ss_pred EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEE
Q 019868 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (334)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lI 251 (334)
+|+++.|+|+.|...++..|++++.++.++++.+|++.+++.+ .+++++++++||||||.+++.+++.++++.++++|
T Consensus 96 ~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~--~~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii 173 (337)
T PRK03967 96 HIVITPPTFGMYSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA--KNASAVFICSPNNPTGNLQPEEEILKVLETGKPVV 173 (337)
T ss_pred eEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc--cCCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEE
Confidence 9999999999999988999999999998777899999998875 46889999999999999999999999997799999
Q ss_pred EccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868 252 LDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (334)
Q Consensus 252 vDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~ 331 (334)
+||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|++.++
T Consensus 174 ~De~y~~~~~~-~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 252 (337)
T PRK03967 174 LDEAYAEFSGK-SLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDL 252 (337)
T ss_pred EECchhhhccc-chHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHH
Confidence 99999998642 33344445678999999999999999999999999999999999888899999999999999998765
Q ss_pred hc
Q 019868 332 LE 333 (334)
Q Consensus 332 ~~ 333 (334)
+.
T Consensus 253 ~~ 254 (337)
T PRK03967 253 IE 254 (337)
T ss_pred HH
Confidence 53
No 14
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.8e-40 Score=315.42 Aligned_cols=265 Identities=45% Similarity=0.748 Sum_probs=232.1
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE 145 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~ 145 (334)
+.+++..+.++.+.......+++++.++.++|+|+.|+++++++|.+++++.+ ......||++..+++|+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~ 85 (361)
T PRK00950 6 IRAEVKEIKPYVPGKSKEEIAREYGIDPESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEPDAPELREALSKYTGVP 85 (361)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHhCCCccceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCC
Confidence 45677777888666666667788888777899999999999999999888765 33346788777799999999999999
Q ss_pred CCCEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868 146 SDHILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (334)
Q Consensus 146 ~~~I~~-t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l 224 (334)
+++|++ |+|+++++..+++.++++||+|++++|+|..|...++..|++++.++.+++|.+|++++++.++ .+++++++
T Consensus 86 ~~~i~~~~~Ga~~~i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~~ 164 (361)
T PRK00950 86 VENIIVGGDGMDEVIDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDVDSVLNAIT-EKTKVIFL 164 (361)
T ss_pred HHHEEEeCCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhc-cCCCEEEE
Confidence 999999 7999999999999889999999999999999998889999999999977778999999999886 57899999
Q ss_pred eCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
++||||||.+++.+++.++++. ++++|+||+|.+|.. ..........+++++++||||.||++|+|+||+++++++++
T Consensus 165 ~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~~-~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~ 243 (361)
T PRK00950 165 CTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFAE-YDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLID 243 (361)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhCc-cchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHH
Confidence 9999999999999999999987 999999999998873 23333444567899999999999999999999999999999
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 304 YLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 304 ~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
.+.+...+++++.++|.++..+|++.+|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 273 (361)
T PRK00950 244 YYMRAKTPFSLTRLSQAAAIAALSDKEYIE 273 (361)
T ss_pred HHHHhcCCCCCCHHHHHHHHHHhcCHHHHH
Confidence 999988888999999999999999877653
No 15
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.8e-41 Score=318.94 Aligned_cols=235 Identities=33% Similarity=0.533 Sum_probs=209.8
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcC-c----CCCCCCCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQL-K----FPYIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Yp~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..++|+.|+|++++++.+++++.+. . ...+||+.|.++||+++|+++ ++++++|++|+|+++++..+++
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQ 106 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHH
Confidence 4699999999999999999988752 1 336788888999999999998 5788999999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 244 (334)
+++++||.|+++.|+|..|...++..|.+++.++.++++++|++++++++++.++++|++++||||||.+++.+++++|+
T Consensus 107 ~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 186 (368)
T PRK03317 107 AFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAIL 186 (368)
T ss_pred HhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999987677899999999998756789999999999999999999999999
Q ss_pred hC-CCeEEEccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHH
Q 019868 245 EM-PILVVLDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVA 321 (334)
Q Consensus 245 ~~-~~~lIvDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~a 321 (334)
+. ++++|+||+|.+|.+.+ ......+..+++++++||||.||++|+|+||+++++++++.+.+.+..+++++++|.+
T Consensus 187 ~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a 266 (368)
T PRK03317 187 DAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAA 266 (368)
T ss_pred HHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHH
Confidence 97 89999999999987543 2233334456899999999999999999999999999999998888788999999999
Q ss_pred HHHHhcCch
Q 019868 322 ACAALQNPI 330 (334)
Q Consensus 322 a~~~L~~~~ 330 (334)
+.++|++.+
T Consensus 267 ~~~~l~~~~ 275 (368)
T PRK03317 267 ARAALRHAD 275 (368)
T ss_pred HHHHhhCHH
Confidence 999998744
No 16
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-40 Score=311.83 Aligned_cols=251 Identities=39% Similarity=0.649 Sum_probs=217.2
Q ss_pred HHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhc
Q 019868 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDS 142 (334)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~ 142 (334)
+.+..+..+.+|... .....++|+.|++++++|+.+.+++.+ +. ...+|++.+..+||+++|+++
T Consensus 5 ~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~ 72 (351)
T PRK14807 5 LVREEIKGFKNYEVH------------SIPYKYKMDANETPFELPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYC 72 (351)
T ss_pred HHHHHHhhcCCCCCC------------CCCceeEccCCCCCCCCCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHh
Confidence 445666666666211 112359999999999999999999876 32 336787777899999999999
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (334)
Q Consensus 143 ~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i 222 (334)
++++++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.++.++++.+|++++++++++.++|+|
T Consensus 73 ~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v 152 (351)
T PRK14807 73 SVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLV 152 (351)
T ss_pred CCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999877789999999999975589999
Q ss_pred EEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 223 FLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
++++||||||.+++.+++.++++. +.++|+||+|.+|. +..........+++++++||||.||++|+|+||+++++++
T Consensus 153 ~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~ 231 (351)
T PRK14807 153 FLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENI 231 (351)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHH
Confidence 999999999999999999999987 78899999998875 3333333445689999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868 302 IEYLWRAKQPYNVSVAAEVAACAALQNP 329 (334)
Q Consensus 302 i~~l~~~~~~~~~~~~~q~aa~~~L~~~ 329 (334)
++.+.+.+..++++.++|.++.++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 259 (351)
T PRK14807 232 LKYLNLVKSPYNINSLSQVIALKVLRTG 259 (351)
T ss_pred HHHHHHccCCCCcCHHHHHHHHHHHhHH
Confidence 9999988888899999999999999874
No 17
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-40 Score=314.60 Aligned_cols=237 Identities=41% Similarity=0.666 Sum_probs=211.6
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCC
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDP 169 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~ 169 (334)
+.++|+|+.|+|++++|+++++++.+ +. ....||+++..+||+++|+++++++ ++|++|+|+++++..++.+++++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~ 104 (356)
T PRK04870 25 ATGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKP 104 (356)
T ss_pred CCCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCC
Confidence 35789999999999999999999876 32 2367888888999999999999875 48999999999999999999999
Q ss_pred CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CC
Q 019868 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PI 248 (334)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~ 248 (334)
||+|++++|+|..|...++..|++++.++.++++++|++.+++.+.+.++++|++++||||||.+++.+++++|++. +.
T Consensus 105 gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~ 184 (356)
T PRK04870 105 GATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPG 184 (356)
T ss_pred CCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCC
Confidence 99999999999999999999999999999877789999999999875689999999999999999999999999988 88
Q ss_pred eEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (334)
Q Consensus 249 ~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~ 328 (334)
++|+||+|.+|.+. .....+...+++++++|||| ++++|+|+||+++++++++.+.+.+..++++.++|.++..+|++
T Consensus 185 ~ii~De~y~~~~~~-~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~ 262 (356)
T PRK04870 185 LVVVDEAYQPFAGD-SWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEH 262 (356)
T ss_pred EEEEECCchhhcCc-chHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhC
Confidence 99999999988753 22233455678999999999 99999999999999999999988887789999999999999987
Q ss_pred chhh
Q 019868 329 PIYL 332 (334)
Q Consensus 329 ~~~~ 332 (334)
.+++
T Consensus 263 ~~~~ 266 (356)
T PRK04870 263 VDVL 266 (356)
T ss_pred HHHH
Confidence 6554
No 18
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-40 Score=307.36 Aligned_cols=230 Identities=30% Similarity=0.438 Sum_probs=202.9
Q ss_pred cCCCCCCCCCCHHHHHHHhcC-cC--CCCC-CCcChHHHHHHHHHhc----C---CCCCCEEEeCCHHHHHHHHHHHhcC
Q 019868 100 IDANENPYGPPPEVREALGQL-KF--PYIY-PDPESRRLRAALAKDS----G---LESDHILVGCGADELIDLIMRCVLD 168 (334)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~~-~~--~~~Y-p~~g~~~lr~~lA~~~----~---~~~~~I~~t~G~~~~i~~~~~~l~~ 168 (334)
|+.|.+++++|+.+.+++++. .. .++| +..|.++|+++|++.+ | ...++|++|.|+.++|...+..+++
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~ 115 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN 115 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC
Confidence 999999999999999998873 22 3666 6778888888888765 3 2456899999999999999999999
Q ss_pred CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--------CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (334)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--------~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (334)
+||+|++.+|.|..|...+.++|.+++.++.. .+|.+|.++++.++. +++|+|++|+||||||.++++++|
T Consensus 116 ~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t-~kTk~Ii~ntPhNPtGkvfsReeL 194 (420)
T KOG0257|consen 116 PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKIT-EKTKAIILNTPHNPTGKVFSREEL 194 (420)
T ss_pred CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhcc-CCccEEEEeCCCCCcCcccCHHHH
Confidence 99999999999999999999999999999843 578999999999998 799999999999999999999999
Q ss_pred HHHHhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC-
Q 019868 241 LKILEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 311 (334)
Q Consensus 241 ~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~- 311 (334)
++|+++ |+++|.||+|..+.+++. ...+.+++++++.++||||+||++|||+||+++++.++..+..+++.
T Consensus 195 e~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~ 274 (420)
T KOG0257|consen 195 ERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF 274 (420)
T ss_pred HHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHhhcc
Confidence 999986 999999999999987663 23345679999999999999999999999999999999999988887
Q ss_pred -CCCcHHHHHHHHHHhcCch
Q 019868 312 -YNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 312 -~~~~~~~q~aa~~~L~~~~ 330 (334)
+.++++.|.|..+++..+.
T Consensus 275 ~~~~~Tp~q~A~a~a~~~~~ 294 (420)
T KOG0257|consen 275 VFTCPTPIQEASAAAFALEL 294 (420)
T ss_pred ccccCcHHHHHHHHHHhhhh
Confidence 5688999999888887644
No 19
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=5.4e-40 Score=311.64 Aligned_cols=249 Identities=29% Similarity=0.536 Sum_probs=214.1
Q ss_pred CCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHH
Q 019868 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADEL 158 (334)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~ 158 (334)
+..+..++++.|....++++|+.|++++++|+.+.+++.+ +....+||+++..+||+++|+++++++++|++|+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~ 83 (354)
T PRK06358 4 GGNINEIAREKGLTKNMILDFSANINPLGVPESLKQAITENLDKLVEYPDPDYLELRKRIASFEQLDLENVILGNGATEL 83 (354)
T ss_pred CccHHHHHHHhCCCccceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHhCCChhhEEECCCHHHH
Confidence 3445667788888777789999999999999999998876 344567988888999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
+..+++++ .+ +.|++++|+|+.|...++..|++++.++.+ ++|.+| +++++.+. .+++++++++||||||.+++
T Consensus 84 l~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~-~~~~~v~~~~P~NPtG~~~~ 159 (354)
T PRK06358 84 IFNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIK-EEIDLVFLCNPNNPTGQLIS 159 (354)
T ss_pred HHHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhc-cCCCEEEEeCCCCCCCCccC
Confidence 99999975 44 689999999999999999999999999864 357889 66666665 57899999999999999999
Q ss_pred HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHh
Q 019868 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRA 308 (334)
Q Consensus 237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~ 308 (334)
.+++++|++. ++++|+||+|.+|.+++. .....+..+++++++||||.||++|+|+||++++ +.+++.+.+.
T Consensus 160 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~ 239 (354)
T PRK06358 160 KEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQM 239 (354)
T ss_pred HHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHh
Confidence 9999998864 899999999999986542 2233445689999999999999999999999984 7888999998
Q ss_pred cCCCCCcHHHHHHHHHHhcCchhh
Q 019868 309 KQPYNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 309 ~~~~~~~~~~q~aa~~~L~~~~~~ 332 (334)
...++++.++|.++.++|++.+|+
T Consensus 240 ~~~~~~~~~~q~~~~~~l~~~~~~ 263 (354)
T PRK06358 240 REPWSINTFADLAGQTLLDDKEYI 263 (354)
T ss_pred CCCCcchHHHHHHHHHHhccHHHH
Confidence 888999999999999999887664
No 20
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-40 Score=316.84 Aligned_cols=242 Identities=25% Similarity=0.355 Sum_probs=206.6
Q ss_pred hCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcC------CCC-CCEEEeCCHHHHH
Q 019868 90 LGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG------LES-DHILVGCGADELI 159 (334)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~------~~~-~~I~~t~G~~~~i 159 (334)
....+.++++|+.|++++++++.+.+++.+ +. ..+.|+..|..+||+++|++++ +++ ++|++|+|+++++
T Consensus 27 ~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 27 KIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred hhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 333456789999999999999999988876 22 2355666789999999999873 677 7999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
..++.+++++||+|++++|+|+.|...++..|++++.++.+ ++|.+|++++++++. .++++|++++||||||.+++.
T Consensus 107 ~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s~ 185 (399)
T PRK07681 107 VHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA-DKAKMMILNFPGNPVPAMAHE 185 (399)
T ss_pred HHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhcc-ccceEEEEeCCCCCcCcCCCH
Confidence 99999999999999999999999999999999999999964 347789999999886 589999999999999999999
Q ss_pred HHHHHHHhC----CCeEEEccCCcCccCCCC-chh---hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868 238 EDLLKILEM----PILVVLDEAYTEFSGLES-RME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~---~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
+++++|++. +++||+||+|.+|.+++. ... .....+++++++||||.||++|+|+||+++++++++.+.+.+
T Consensus 186 ~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~ 265 (399)
T PRK07681 186 DFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFK 265 (399)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHH
Confidence 999988764 899999999999986432 112 112347899999999999999999999999999999998876
Q ss_pred C--CCCCcHHHHHHHHHHhcCc-hhh
Q 019868 310 Q--PYNVSVAAEVAACAALQNP-IYL 332 (334)
Q Consensus 310 ~--~~~~~~~~q~aa~~~L~~~-~~~ 332 (334)
. .++++.+.|.++.++|++. +|+
T Consensus 266 ~~~~~~~s~~~q~~~~~~l~~~~~~~ 291 (399)
T PRK07681 266 SNTDYGVFLPIQKAACAALRNGAAFC 291 (399)
T ss_pred hhcccCCCHHHHHHHHHHHhCcHHHH
Confidence 5 4789999999999999884 454
No 21
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=5.3e-40 Score=316.15 Aligned_cols=240 Identities=23% Similarity=0.346 Sum_probs=205.4
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C---CCCC-CEEEeCCHHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G---LESD-HILVGCGADELIDLI 162 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~---~~~~-~I~~t~G~~~~i~~~ 162 (334)
.+.++|+|+.|++++++++.+.+++.+ +.....|++. |..+||+++|+++ | ++++ +|++|+|+++++..+
T Consensus 27 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~ 106 (396)
T PRK09147 27 ADLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAF 106 (396)
T ss_pred cCCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHH
Confidence 467899999999999999999998876 3444779654 7899999999976 5 5664 899999999999999
Q ss_pred HHHhcCC---CCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 163 MRCVLDP---GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 163 ~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
+++++++ ||+|++++|+|..|...++..|++++.+|.+ ++|.+|++++++.+. +++|++++||||||||.+++.
T Consensus 107 ~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~~~s~ 185 (396)
T PRK09147 107 AQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVW-ARTQLLFVCSPGNPTGAVLPL 185 (396)
T ss_pred HHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHh-hccEEEEEcCCCCCcCccCCH
Confidence 9999999 8999999999999999999999999999964 457899999998875 589999999999999999999
Q ss_pred HHHHHHHhC----CCeEEEccCCcCccCCCC--chhh------h--cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 238 EDLLKILEM----PILVVLDEAYTEFSGLES--RMEW------V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~------~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
+++++|++. +++||+||+|.++.+++. .... . +..+|+++++||||.|+++|+|+||+++++++++
T Consensus 186 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~ 265 (396)
T PRK09147 186 DDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLK 265 (396)
T ss_pred HHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHH
Confidence 999999874 899999999999876432 1111 1 1357999999999999999999999999999999
Q ss_pred HHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868 304 YLWRAKQP--YNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
.+.+.+.. ++++.+.|.++.+++.+.+|++
T Consensus 266 ~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~ 297 (396)
T PRK09147 266 KFLLYRTYHGCAMPPAVQAASIAAWNDEAHVR 297 (396)
T ss_pred HHHHHhhhcccCCCHHHHHHHHHHhcchhHHH
Confidence 88877653 6789999999999887766553
No 22
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-40 Score=312.11 Aligned_cols=247 Identities=34% Similarity=0.539 Sum_probs=210.5
Q ss_pred HHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868 66 FIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE 145 (334)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~ 145 (334)
..+..+..+.++.+.. +..+.+.++|+.|+|++++++.+ ......+||+.+..+||+++|++++++
T Consensus 11 ~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~~~~Lr~aia~~~~~~ 76 (354)
T PRK04635 11 LARPELLALTPYQSAR---------RIGGRGDIWINANESPFNNEYKL-----DLARLNRYPECQPPELINAYSAYAGVA 76 (354)
T ss_pred HhhHHhhcCCCCCCCC---------CcCCCCcEEeeCCCCCCCCChhh-----hhHHhccCCCCCHHHHHHHHHHHhCcC
Confidence 3455566666664321 11234569999999999998754 111236799888899999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEE
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFL 224 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l 224 (334)
+++|++|+|++++|..++.+++++| |+|++++|+|..|...++..|++++.+|.++++.+|++.++. + .++|+|++
T Consensus 77 ~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~l~~-~--~~~~li~i 153 (354)
T PRK04635 77 PEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDYIEQ-L--DGAKLVFI 153 (354)
T ss_pred HHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHHHHh-c--cCCCEEEE
Confidence 9999999999999999999999998 999999999999999999999999999987678999998873 3 47999999
Q ss_pred eCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 225 TSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
||||||||.+++.+++++|++. +++||+||+|.+|....+........+++++++||||.||++|+|+||++++++++
T Consensus 154 ~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~ 233 (354)
T PRK04635 154 CNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI 233 (354)
T ss_pred eCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH
Confidence 9999999999999999999986 78999999999987544444445567899999999999999999999999999999
Q ss_pred HHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868 303 EYLWRAKQPYNVSVAAEVAACAALQNP 329 (334)
Q Consensus 303 ~~l~~~~~~~~~~~~~q~aa~~~L~~~ 329 (334)
+.+.+...+++++.+.|.++.++|++.
T Consensus 234 ~~l~~~~~~~~~~~~~~~~a~~~l~~~ 260 (354)
T PRK04635 234 EILMRVIAPYPVPLPVSEIATQALSEA 260 (354)
T ss_pred HHHHhhcCCCCCCHHHHHHHHHHHhcc
Confidence 999888878999999999999999764
No 23
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1e-39 Score=311.00 Aligned_cols=263 Identities=39% Similarity=0.655 Sum_probs=226.8
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCC
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLE 145 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~ 145 (334)
.++++.++.++.+...+..++++. .+.++++|+.|++++++++.+++++.+ ......||+.+..+||+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~ 83 (367)
T PRK02731 6 PNPGILDIAPYVPGKPIEELVREY--GIADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGSGFELKAALAEKFGVD 83 (367)
T ss_pred chhhhcccCCcCCCCCHHHHHHhc--CCCceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHHhCcC
Confidence 356676777776555656566655 567799999999999999999888876 33346788776789999999999999
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
+++|++|+|+++++..++..++++||+|++++|+|..|...++..|++++.++. +++.+|++.+++.++ +++++|+++
T Consensus 84 ~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~l~ 161 (367)
T PRK02731 84 PERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVT-PRTRLVFIA 161 (367)
T ss_pred HHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhC-CCCcEEEEe
Confidence 999999999999999999999999999999999999999888889999999987 567899999999997 689999999
Q ss_pred CCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCC---CchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868 226 SPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLE---SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 226 ~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~---~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
+||||||.+++.++++++++. ++++|+||+|.++.+.+ ......+..+++++++||||.||++|+|+||+++++
T Consensus 162 ~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~ 241 (367)
T PRK02731 162 NPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP 241 (367)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH
Confidence 999999999999999999986 79999999999887532 222334456789999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 300 SIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 300 ~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
++++.+.+...+++.+.++|.++.++|++.++++
T Consensus 242 ~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~ 275 (367)
T PRK02731 242 EIIDALNRVRQPFNVNSLALAAAVAALDDDAFVE 275 (367)
T ss_pred HHHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHH
Confidence 9999999888888999999999999999876643
No 24
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-40 Score=311.30 Aligned_cols=233 Identities=34% Similarity=0.568 Sum_probs=205.3
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~ 172 (334)
+++|+|+.|++++++++.+.+++.+ +. ....||+.+..+||+++|+++++++++|++|+|++++|.+++++++++||+
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~ 103 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRP 103 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 5689999999999999999999876 22 246788878899999999999999999999999999999999999999999
Q ss_pred EEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCeE
Q 019868 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILV 250 (334)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~l 250 (334)
|++++|+|+.|...++..|++++.++.++++.+|++++++ +.++++++|||||||.+++.+++++|++. ++++
T Consensus 104 vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~l 178 (353)
T PRK05387 104 LLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVEDYLR-----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVV 178 (353)
T ss_pred EEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHHHHHh-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEE
Confidence 9999999999999999999999999987778999999863 35789999999999999999999999986 8999
Q ss_pred EEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhc
Q 019868 251 VLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQ 327 (334)
Q Consensus 251 IvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~~L~ 327 (334)
|+||+|.+|... +........+++++++||||.||++|+|+||+++++++++.+.+.... ++++.++|.++.++|+
T Consensus 179 ivDe~y~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~ 257 (353)
T PRK05387 179 VIDEAYVDFGGE-SAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIE 257 (353)
T ss_pred EEeCcccccCCc-chHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhc
Confidence 999999887532 333344456889999999999999999999999999999999887643 5789999999999998
Q ss_pred Cchhhc
Q 019868 328 NPIYLE 333 (334)
Q Consensus 328 ~~~~~~ 333 (334)
+.+|++
T Consensus 258 ~~~~~~ 263 (353)
T PRK05387 258 DEAYFE 263 (353)
T ss_pred CHHHHH
Confidence 876653
No 25
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=8.1e-40 Score=310.66 Aligned_cols=251 Identities=27% Similarity=0.433 Sum_probs=212.4
Q ss_pred CCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHH
Q 019868 79 PILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADE 157 (334)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~ 157 (334)
++......+++++.++.++++|+.|+|++++|+.+++++.+ +.....||+.+..+||+++|+++++++++|++|+|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~ 83 (356)
T PRK08056 4 HGGNIREAATVLGISPDQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPDVEYRHLHQALARHHQVPASWILAGNGETE 83 (356)
T ss_pred CCccHHHHHHHhCCChhhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcCccHHHHHHHHHHHhCcChhhEEECCCHHH
Confidence 45566667788888888899999999999999999998875 33335788878899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
++..+++.+ .+|+ +++++|+|..|...++..|++++.++.+ +++.+| +++++.+. +++|+|++++||||||.++
T Consensus 84 ~l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p~NPTG~~~ 159 (356)
T PRK08056 84 SIFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT-PDLDCLFLCTPNNPTGLLP 159 (356)
T ss_pred HHHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc-CCCCEEEEeCCcCCCCCCC
Confidence 999999976 6776 6778999999999999999999999864 345666 45566665 6899999999999999999
Q ss_pred cHHHHHHHHhC----CCeEEEccCCcCccCCC-CchhhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc
Q 019868 236 NDEDLLKILEM----PILVVLDEAYTEFSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK 309 (334)
Q Consensus 236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~ 309 (334)
+.+++++|++. ++++|+||+|.+|.+.. .....+...+++++++||||.||++|+|+||+++ ++++++.+.+..
T Consensus 160 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~ 239 (356)
T PRK08056 160 ERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQ 239 (356)
T ss_pred CHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhC
Confidence 98888887764 89999999999988543 2233344567999999999999999999999998 568888898887
Q ss_pred CCCCCcHHHHHHHHHHhcCchhhc
Q 019868 310 QPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 310 ~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
..++++.++|.++..+|++++|.+
T Consensus 240 ~~~~~~~~~~~~a~~~l~~~~~~~ 263 (356)
T PRK08056 240 MPWSINAFAALAGEVILQDRAYQQ 263 (356)
T ss_pred CCCchhHHHHHHHHHHhCCHHHHH
Confidence 788999999999999998877653
No 26
>PLN02368 alanine transaminase
Probab=100.00 E-value=3.7e-40 Score=317.21 Aligned_cols=262 Identities=18% Similarity=0.292 Sum_probs=214.1
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCC--------C----------------------CCCHHHHHH
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENP--------Y----------------------GPPPEVREA 116 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~--------~----------------------~~~~~v~~a 116 (334)
+++++..+.++ ....+...+.+....+.++|+|++|+++ | .+++.+.++
T Consensus 11 ~~~~~~~~~~~-~~~~~~~~a~~~~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a 89 (407)
T PLN02368 11 LNENVKKCQYA-VRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARA 89 (407)
T ss_pred cCHHHHhhhhh-cCCHHHHHHHHHHHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHH
Confidence 45666666666 3455666777776677789999999986 3 155556666
Q ss_pred HhcC---c-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHH
Q 019868 117 LGQL---K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYE 184 (334)
Q Consensus 117 l~~~---~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~ 184 (334)
+..+ . ....|++ .|.++||+++|+++ | +++++|++|+|+++++..++.+++ ++||+|++++|+|+.|.
T Consensus 90 ~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~ 169 (407)
T PLN02368 90 KHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS 169 (407)
T ss_pred HHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH
Confidence 5543 1 2357855 58899999999987 5 578999999999999999999887 79999999999999999
Q ss_pred HHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEc
Q 019868 185 FDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLD 253 (334)
Q Consensus 185 ~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvD 253 (334)
..++..|++++.++.+ ++|++|++.+++.+++ .++|+++++|||||||.+++.+++++|++. +++||+|
T Consensus 170 ~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D 249 (407)
T PLN02368 170 ATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD 249 (407)
T ss_pred HHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999999854 4589999999998862 168999999999999999999999999875 8999999
Q ss_pred cCCcCccCCC--Cchh---hh---c----CCCcEEEEcCCchhh-cccccchheeE---cCHHHHHHHHHhc-CCCCCcH
Q 019868 254 EAYTEFSGLE--SRME---WV---K----KHDNLIVLRTFSKRA-GLAGLRVGYGA---FPLSIIEYLWRAK-QPYNVSV 316 (334)
Q Consensus 254 eay~~~~~~~--~~~~---~~---~----~~~~~i~i~S~SK~~-gl~G~R~G~l~---~~~~~i~~l~~~~-~~~~~~~ 316 (334)
|+|.++.+++ .... .+ . ..+++++++||||.| |++|||+||++ +++++++.+.+.. ..++++.
T Consensus 250 E~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~~~~~~~ 329 (407)
T PLN02368 250 EVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASIALSPNV 329 (407)
T ss_pred ccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcccCCCCc
Confidence 9999998643 1111 11 1 245899999999998 89999999999 4889999998875 3478999
Q ss_pred HHHHHHHHHhcCc
Q 019868 317 AAEVAACAALQNP 329 (334)
Q Consensus 317 ~~q~aa~~~L~~~ 329 (334)
++|.++.++|+++
T Consensus 330 ~~Q~aa~~~l~~~ 342 (407)
T PLN02368 330 SGQIFMGLMVNPP 342 (407)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999864
No 27
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-39 Score=315.08 Aligned_cols=240 Identities=20% Similarity=0.321 Sum_probs=205.5
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhc----C---CCCC-CEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDS----G---LESD-HILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~----~---~~~~-~I~~t~G~~~~i~~ 161 (334)
++.++++|+.|++++++++.+.+++.+ +. ...+||+.|..+||+++|+++ | ++++ +|++|+|++++|..
T Consensus 42 ~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~ 121 (410)
T PRK06290 42 PDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAM 121 (410)
T ss_pred CCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHH
Confidence 456799999999999999998888765 22 235688789999999999996 4 5676 79999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
++.+++++||.|+++.|+|+.|...++..|++++.++.+ .++.+|++++++.+. .++++|++++||||||.+++.++
T Consensus 122 ~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~nP~NPTG~v~s~e~ 200 (410)
T PRK06290 122 LPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIK-EKAKLLYLNYPNNPTGAVATKEF 200 (410)
T ss_pred HHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhc-ccceEEEEECCCCCCCcCCCHHH
Confidence 999999999999999999999999999999999999964 357789999999886 58999999999999999999999
Q ss_pred HHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC
Q 019868 240 LLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY 312 (334)
Q Consensus 240 l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~ 312 (334)
+++|++. +++||+||+|.++.+++.. .......+++++++||||.||++|+|+||+++++++++.+.+.+..+
T Consensus 201 l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~ 280 (410)
T PRK06290 201 YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNN 280 (410)
T ss_pred HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcc
Confidence 9988764 8999999999998764321 12222346789999999999999999999999999999998887764
Q ss_pred --CCcHHHHHHHHHHhcCchhhc
Q 019868 313 --NVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 313 --~~~~~~q~aa~~~L~~~~~~~ 333 (334)
+.+.++|.++..+|++++|++
T Consensus 281 ~~~~~~~~q~aa~~~l~~~~~~~ 303 (410)
T PRK06290 281 DSGQFIAIQKAGIYALDHPEITE 303 (410)
T ss_pred ccCCcHHHHHHHHHHhhCcHHHH
Confidence 456789999999999877654
No 28
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-39 Score=309.73 Aligned_cols=229 Identities=38% Similarity=0.561 Sum_probs=202.5
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEE
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG-DKIV 174 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl 174 (334)
..++++.|++++++++.. .....+||+++..+||+++|+++++++++|++|+|+++++.+++.+++++| |+|+
T Consensus 32 ~~~~~~~ne~~~~~~~~~------~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vl 105 (364)
T PRK04781 32 GDVWLNANESAWANPADP------DASTRRYPDPQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVL 105 (364)
T ss_pred CCEEeeCCCCCCCCChhh------cchhccCCCCCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEE
Confidence 468999999999987642 112367888888999999999999999999999999999999999999998 7999
Q ss_pred EcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CC
Q 019868 175 DCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PI 248 (334)
Q Consensus 175 ~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~ 248 (334)
+++|+|..|...++..|++++.++.+ +++.+|++++++.+...++++|++++||||||.+++.++++++++. ++
T Consensus 106 v~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~ 185 (364)
T PRK04781 106 VTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKA 185 (364)
T ss_pred EcCCChHHHHHHHHHcCCEEEEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc
Confidence 99999999999889999999999852 3467899998766544689999999999999999999999999985 78
Q ss_pred eEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868 249 LVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (334)
Q Consensus 249 ~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~ 328 (334)
+||+||+|.+|.+.++.....+..+|+++++||||.||++|+|+||+++++++++.+.+.+.+++++.++|.++.++|++
T Consensus 186 ~iI~Deay~~f~~~~~~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~ 265 (364)
T PRK04781 186 LVVVDEAYGEFSDVPSAVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSA 265 (364)
T ss_pred EEEEeCcchhhcCCcchHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhc
Confidence 99999999999865545555566789999999999999999999999999999999999999999999999999999988
Q ss_pred ch
Q 019868 329 PI 330 (334)
Q Consensus 329 ~~ 330 (334)
++
T Consensus 266 ~~ 267 (364)
T PRK04781 266 PA 267 (364)
T ss_pred cc
Confidence 63
No 29
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=1.8e-39 Score=322.39 Aligned_cols=261 Identities=22% Similarity=0.297 Sum_probs=211.3
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHh
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKD 141 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~ 141 (334)
.++++.++.++ ....+...+++....+.++|+|+.|++ ++++|+++.+++.+ +.....|++. |..+||++||++
T Consensus 119 ~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~ 197 (517)
T PRK13355 119 KSHKLDNVLYD-VRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQY 197 (517)
T ss_pred hhHHhhccCcc-HHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHH
Confidence 57777776665 233344556666666778999999877 46678888888765 4444679655 899999999999
Q ss_pred c------CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHh
Q 019868 142 S------GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADA 213 (334)
Q Consensus 142 ~------~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~ 213 (334)
+ ++++++|++|+|+++++.+++.+++++||+|++++|+|+.|...++..|++++.++.+ .+|.+|+++++++
T Consensus 198 ~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 277 (517)
T PRK13355 198 AQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSK 277 (517)
T ss_pred HHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHh
Confidence 8 6889999999999999999999999999999999999999999999999999999853 4689999999999
Q ss_pred cccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-chh--hhcCCCcEEEEcCCchhhc
Q 019868 214 VEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-RME--WVKKHDNLIVLRTFSKRAG 286 (334)
Q Consensus 214 l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~~~~~~i~i~S~SK~~g 286 (334)
++ +++|+|+++|||||||.+++.+++++|++. +++||+||+|.+|.+++. ... .......+++++||||.|+
T Consensus 278 ~~-~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~ 356 (517)
T PRK13355 278 IT-SRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHM 356 (517)
T ss_pred cC-cCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhcc
Confidence 86 689999999999999999999999888764 899999999999986532 222 2222234677899999999
Q ss_pred ccccchheeEcC--HH----HHHHHHHhcCC-CCCcHHHHHHHHHHhcCc
Q 019868 287 LAGLRVGYGAFP--LS----IIEYLWRAKQP-YNVSVAAEVAACAALQNP 329 (334)
Q Consensus 287 l~G~R~G~l~~~--~~----~i~~l~~~~~~-~~~~~~~q~aa~~~L~~~ 329 (334)
++|||+||++++ ++ +++.+...... ++++.++|.++.++|++.
T Consensus 357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~ 406 (517)
T PRK13355 357 IAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGH 406 (517)
T ss_pred CcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCC
Confidence 999999999953 44 44445444433 678999999999999763
No 30
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-39 Score=306.26 Aligned_cols=229 Identities=34% Similarity=0.513 Sum_probs=199.3
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCcChHHHHHHHHHhcC---CCCCCEEEeCCHHHHHHHHHHHh
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDPESRRLRAALAKDSG---LESDHILVGCGADELIDLIMRCV 166 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~g~~~lr~~lA~~~~---~~~~~I~~t~G~~~~i~~~~~~l 166 (334)
.+.++|+|+.|+|++++|+.+++++.+ +. ....||+++..+||+++|++++ +++++|++|+|++++|..++..+
T Consensus 17 ~~~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~ 96 (335)
T PRK14808 17 EKRDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF 96 (335)
T ss_pred CCCceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh
Confidence 346789999999999999999998865 32 2245887789999999999998 88999999999999999999976
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (334)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 246 (334)
|.|++++|+|+.|...++..|++++.+|.++++.++... + .++++++++|||||||.+++.+++++|++.
T Consensus 97 ----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~----~--~~~~~i~i~nP~NPTG~~~s~~~l~~l~~~ 166 (335)
T PRK14808 97 ----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDLRIPEVN----V--GEGDVVFIPNPNNPTGHVFEREEIERILKT 166 (335)
T ss_pred ----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcCCCChhH----c--cCCCEEEEeCCCCCCCCCcCHHHHHHHHhc
Confidence 679999999999999999999999999977666665332 2 246899999999999999999999999987
Q ss_pred CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHh
Q 019868 247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAAL 326 (334)
Q Consensus 247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L 326 (334)
+++||+||+|.+|.. .+....+...+++++++||||.||++|+|+||+++++++++.+.+.+..++++.++|.++.++|
T Consensus 167 ~~~ii~DE~Y~~f~~-~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l 245 (335)
T PRK14808 167 GAFVALDEAYYEFHG-ESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVAL 245 (335)
T ss_pred CCEEEEECchhhhcC-CchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 999999999999863 2333444566899999999999999999999999999999999988878999999999999999
Q ss_pred cCchhh
Q 019868 327 QNPIYL 332 (334)
Q Consensus 327 ~~~~~~ 332 (334)
++.++.
T Consensus 246 ~~~~~~ 251 (335)
T PRK14808 246 DHREIF 251 (335)
T ss_pred hCHHHH
Confidence 886554
No 31
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=311.03 Aligned_cols=259 Identities=21% Similarity=0.305 Sum_probs=212.8
Q ss_pred HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc--
Q 019868 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS-- 142 (334)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~-- 142 (334)
++++.++.++. ...+...+++....+.++++|+.|++++++|+.+.+++.+ +. ....| +..|.+++|+++|+++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 84 (387)
T PRK08960 6 SRRSRDIEPFH-VMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQ 84 (387)
T ss_pred hhHHHhCCchH-HHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHH
Confidence 34444444442 2222223333333456789999999999999999998876 32 22457 6678999999999997
Q ss_pred ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc
Q 019868 143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER 216 (334)
Q Consensus 143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~ 216 (334)
++++++|++|+|+++++..++..++++||+|++++|+|+.+...+...|++++.++.+ .+|.+|++.+++.++
T Consensus 85 ~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~- 163 (387)
T PRK08960 85 RYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWN- 163 (387)
T ss_pred HhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhC-
Confidence 3788999999999999999999999999999999999999999999999999998854 357899999999887
Q ss_pred CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccch
Q 019868 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRV 292 (334)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~ 292 (334)
++++++++++||||||.+++.+++++|++. ++++|+||+|.++.+++.........+++++++||||.||++|+|+
T Consensus 164 ~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRi 243 (387)
T PRK08960 164 ADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRL 243 (387)
T ss_pred ccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEE
Confidence 578899999999999999999999998764 8999999999998765433333444678999999999999999999
Q ss_pred heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 293 GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 293 G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
||+++++++++.+.+.... ++++.+.|.++.++|++
T Consensus 244 G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 281 (387)
T PRK08960 244 GWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEP 281 (387)
T ss_pred EEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhc
Confidence 9999999999999887764 46799999999999975
No 32
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.9e-39 Score=311.55 Aligned_cols=244 Identities=20% Similarity=0.232 Sum_probs=199.7
Q ss_pred HhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCC-CcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHH
Q 019868 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYP-DPESRRLRAALAKDS----G--LESD-HILVGCGADE 157 (334)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp-~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~ 157 (334)
.....+.++|+|+.|++++++++.+.+++.+ +. ....|+ ..|.++||+++|+++ | ++++ +|++|+|+++
T Consensus 24 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~ 103 (388)
T PRK07366 24 QARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE 103 (388)
T ss_pred HHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence 3344566789999999999999999988875 22 235685 468999999999987 3 6787 6999999999
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
++..++.+++++||+|++++|+|+.|...++..|++++.++.+ .++.+|++++++.+. .++|+|++|+||||||.++
T Consensus 104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPTG~~~ 182 (388)
T PRK07366 104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVL-AQARLMVLSYPHNPTTAIA 182 (388)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhc-ccceEEEEeCCCCCCCccC
Confidence 9999999999999999999999999999999999999999964 347789999988775 5789999999999999999
Q ss_pred cHHHHHHHHhC----CCeEEEccCCcCccCCCC--chhh--h-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 236 NDEDLLKILEM----PILVVLDEAYTEFSGLES--RMEW--V-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~~--~~~~--~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
+.+++++|++. +++||+||+|.+|.+++. .... . ...+++++++||||.||++|+|+||+++++++++.+.
T Consensus 183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~ 262 (388)
T PRK07366 183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALR 262 (388)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHH
Confidence 99999998764 899999999999986432 1111 2 1235789999999999999999999999999999999
Q ss_pred HhcCCCCC--cHHHHHHHHHHhc-Cchhhc
Q 019868 307 RAKQPYNV--SVAAEVAACAALQ-NPIYLE 333 (334)
Q Consensus 307 ~~~~~~~~--~~~~q~aa~~~L~-~~~~~~ 333 (334)
+.+..++. ....+.++.++|. +++|++
T Consensus 263 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~ 292 (388)
T PRK07366 263 QVKAVVDFNQYRGILNGAIAALTGPQATVQ 292 (388)
T ss_pred HHHhhcccCCCHHHHHHHHHHHhCcHHHHH
Confidence 88876543 2334455556654 455543
No 33
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.3e-39 Score=305.59 Aligned_cols=238 Identities=22% Similarity=0.268 Sum_probs=197.5
Q ss_pred CCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCH
Q 019868 77 YQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGA 155 (334)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~ 155 (334)
..++.....++..+|.++.++++|+.|+||+++|+..... ....+||++. .+||+++|+++|+. +++|++|+|+
T Consensus 6 ~~hg~~~~~~~~~~~~~~~~~i~ls~Nenp~~~~~~~~~~----~~~~~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs 80 (339)
T PRK06959 6 IAHGGNLHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA----DAWRRLPEDD-DGLAACAARYYGAPDAAHVLPVAGS 80 (339)
T ss_pred cCCCchHHHHHHHcCCChhhhceeccCCCCCCCCCCCCCH----HHHHhCCCch-HHHHHHHHHHhCCCCcccEEECcCH
Confidence 3456667777788887777899999999999887322211 1125599876 99999999999996 5899999999
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 156 ~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
+++|..+.. ++++|| |++++|+|+.|...++..|++++.++.++ +. +. ...+++++||||||||.++
T Consensus 81 ~e~i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------~~----~~-~~~~~v~l~nPnNPTG~~~ 147 (339)
T PRK06959 81 QAAIRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------DT----LP-AALTHLIVVNPNNPTAERL 147 (339)
T ss_pred HHHHHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------hh----cc-ccCCEEEEeCCCCCCCCCC
Confidence 999997765 578877 88899999999999999999999987532 22 22 2467999999999999999
Q ss_pred cHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 236 NDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
+.++++++++. +.++|+||+|.+|....+..... ..+++++++||||.||++|+|+||+++++++++.+.+.+.+
T Consensus 148 s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~ 226 (339)
T PRK06959 148 PAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGA 226 (339)
T ss_pred CHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhcc-CCCCEEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCC
Confidence 99999998752 88999999999987543333222 45789999999999999999999999999999999999989
Q ss_pred CCCcHHHHHHHHHHhcCchhhc
Q 019868 312 YNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 312 ~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
|+++.++|.++.++|++++|.+
T Consensus 227 ~~vs~~~q~a~~~~L~~~~~~~ 248 (339)
T PRK06959 227 WTVSGPARHAVRAAFADAAWQA 248 (339)
T ss_pred CCCcHHHHHHHHHHhCcHHHHH
Confidence 9999999999999999987754
No 34
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.8e-39 Score=309.93 Aligned_cols=240 Identities=25% Similarity=0.381 Sum_probs=205.0
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC-cChHHHHHHHHHhc--------CCCCC-CEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-PESRRLRAALAKDS--------GLESD-HILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~-~g~~~lr~~lA~~~--------~~~~~-~I~~t~G~~~~i~~ 161 (334)
.+.+.++|+.|++++++++.+++++.+ ......|++ .|.++||+++|+++ +++++ +|++|+|+++++..
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~ 105 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFA 105 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHH
Confidence 356789999999999999999999886 344467865 47999999999997 36774 89999999999999
Q ss_pred HHHHhcCCCCE--EEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 162 IMRCVLDPGDK--IVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 162 ~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
++++++++||+ |++++|+|..|...++..|++++.++.+ ++|.+|++++++++. .++|+|++++||||||.+++.
T Consensus 106 ~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~p~NPtG~~~s~ 184 (393)
T TIGR03538 106 FAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVW-RRCQLLFVCSPGNPTGAVLSL 184 (393)
T ss_pred HHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHh-hcceEEEEeCCCCCcCcccCH
Confidence 99999999986 9999999999999999999999999963 357899999998886 589999999999999999999
Q ss_pred HHHHHHHhC----CCeEEEccCCcCccCCC--Cchh---h---h--cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 238 EDLLKILEM----PILVVLDEAYTEFSGLE--SRME---W---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 238 ~~l~~l~~~----~~~lIvDeay~~~~~~~--~~~~---~---~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
+++++|++. +++||+||+|.++.+++ .... . . ...+++++++||||.|+++|+|+||+++++++++
T Consensus 185 ~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~ 264 (393)
T TIGR03538 185 DTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILK 264 (393)
T ss_pred HHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHH
Confidence 999998864 89999999999987642 1111 1 1 1357899999999999999999999999999999
Q ss_pred HHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868 304 YLWRAKQP--YNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
.+.+.... ++++.+.|.++.+.+.+.++++
T Consensus 265 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 296 (393)
T TIGR03538 265 AFLRYRTYHGCAMPIPTQLASIAAWNDEQHVR 296 (393)
T ss_pred HHHHHHHhhccCcCHHHHHHHHHHhcChHHHH
Confidence 98887753 5789999999999998766553
No 35
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-38 Score=306.11 Aligned_cols=234 Identities=26% Similarity=0.391 Sum_probs=201.0
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHh-cC-cCCCCCCCc-ChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALG-QL-KFPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~-~~-~~~~~Yp~~-g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
.++++|+.|++++++++.+.+++. .. .....|+++ |.++||+++|+++ ++++++|++|+|+++++..++.+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~ 108 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQS 108 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHH
Confidence 458999999999998888876543 32 234678654 7899999999987 47889999999999999999999
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
++++||+|++++|+|..|...++..|++++.++. +++|.+|++++++.++ +++++|++++||||||.+++.+++++|
T Consensus 109 ~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~l 187 (384)
T PRK06348 109 ILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALIT-SKTKAIILNSPNNPTGAVFSKETLEEI 187 (384)
T ss_pred hcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhC-cCccEEEEeCCCCCCCcCCCHHHHHHH
Confidence 9999999999999999999999999999999984 3567899999999886 688999999999999999999999998
Q ss_pred HhC----CCeEEEccCCcCccCCCC--chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCCC
Q 019868 244 LEM----PILVVLDEAYTEFSGLES--RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNV 314 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~--~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~ 314 (334)
++. +++||+||+|.+|.++.. ...... ..+++++++||||.||++|+|+||+++++++++.+.+... .+++
T Consensus 188 ~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~ 267 (384)
T PRK06348 188 AKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSA 267 (384)
T ss_pred HHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCC
Confidence 764 899999999999986432 222222 2579999999999999999999999999999999887765 3788
Q ss_pred cHHHHHHHHHHhcCc
Q 019868 315 SVAAEVAACAALQNP 329 (334)
Q Consensus 315 ~~~~q~aa~~~L~~~ 329 (334)
+.++|.++..+|++.
T Consensus 268 ~~~~q~~~~~~l~~~ 282 (384)
T PRK06348 268 PTISQRAAIYALKHR 282 (384)
T ss_pred CHHHHHHHHHHHhCc
Confidence 999999999999773
No 36
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=307.08 Aligned_cols=259 Identities=22% Similarity=0.381 Sum_probs=213.0
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc-
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS- 142 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~- 142 (334)
+.+++..+..+ .+..+..... ..++|+|+.|++++++++.+.+++.+ +. ....|++ .|.++||+++++++
T Consensus 32 ~~~~~~~~~~~----~~~~~~~~~~--~~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~ 105 (413)
T PLN00175 32 VAKRLEKFKTT----IFTQMSSLAI--KHGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFK 105 (413)
T ss_pred hhHHhhcCCCC----HHHHHHHHhh--cCCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHH
Confidence 35555554444 2333333322 24689999999999989988888765 32 2367854 58999999999987
Q ss_pred ---C--CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcc
Q 019868 143 ---G--LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVE 215 (334)
Q Consensus 143 ---~--~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~ 215 (334)
+ ++++ +|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.+.
T Consensus 106 ~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~ 185 (413)
T PLN00175 106 KDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFT 185 (413)
T ss_pred HHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcC
Confidence 3 5676 79999999999999999999999999999999999999999999999999964 458999999999987
Q ss_pred cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhh-cCCCcEEEEcCCchhhccc
Q 019868 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWV-KKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~-~~~~~~i~i~S~SK~~gl~ 288 (334)
.++|+|++++||||||.+++.+++++|++. +++||+||+|.++.+++.. ...+ ...+++++++||||.|+++
T Consensus 186 -~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~ 264 (413)
T PLN00175 186 -SKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLT 264 (413)
T ss_pred -cCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCc
Confidence 579999999999999999999999888764 8999999999998864322 1222 2358899999999999999
Q ss_pred ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcCc-hhh
Q 019868 289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQNP-IYL 332 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~~-~~~ 332 (334)
|+|+||+++++++++.+.+... .++++.+.|.++.++|+++ .|+
T Consensus 265 G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~ 311 (413)
T PLN00175 265 GWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYY 311 (413)
T ss_pred chheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999988775 3789999999999999874 443
No 37
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=5.7e-39 Score=304.24 Aligned_cols=234 Identities=37% Similarity=0.647 Sum_probs=208.7
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V 173 (334)
.++|+|+.|++++++++.+.+++.+ ......||+.|..++|+++|+++++++++|++|+|+++++..++..++++||+|
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~V 101 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEV 101 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 3589999999999999999998875 333466888899999999999999999999999999999999999999999999
Q ss_pred EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeE
Q 019868 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILV 250 (334)
Q Consensus 174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~l 250 (334)
+++.|+|..|...++..|++++.++.++++++|++.+++.++ .+++++++++||||||.+++.+++.++++. ++++
T Consensus 102 li~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~i 180 (352)
T PRK03321 102 IFAWRSFEAYPILVQVAGATPVQVPLTPDHTHDLDAMAAAIT-DRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLV 180 (352)
T ss_pred EeCCCCHHHHHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhc-cCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEE
Confidence 999999999998889999999999976568899999999997 589999999999999999999999999985 8999
Q ss_pred EEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868 251 VLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 251 IvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~ 327 (334)
|+||+|.+|.+++. ........+++++++||||.||++|+|+||+++++++++.+.+....++++.++|.++.++|+
T Consensus 181 i~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~ 260 (352)
T PRK03321 181 VLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLA 260 (352)
T ss_pred EEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhc
Confidence 99999999886442 223334567999999999999999999999999999999999887778999999999999997
Q ss_pred Cc
Q 019868 328 NP 329 (334)
Q Consensus 328 ~~ 329 (334)
+.
T Consensus 261 ~~ 262 (352)
T PRK03321 261 AE 262 (352)
T ss_pred CH
Confidence 63
No 38
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-38 Score=305.07 Aligned_cols=262 Identities=23% Similarity=0.351 Sum_probs=211.4
Q ss_pred HHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhc--
Q 019868 69 SHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS-- 142 (334)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~-- 142 (334)
+++..+.++. ...+..++++.+..+.++++|+.|++++++++.+.+++.+ +. ....|++. |.++||+++++++
T Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 84 (385)
T PRK09276 6 DRIKNLPPYL-FAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKR 84 (385)
T ss_pred hHhhhCCccH-HHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHH
Confidence 3444445442 2223334455555567799999999999999999888876 22 23678654 7899999999987
Q ss_pred --C--CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcc
Q 019868 143 --G--LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVE 215 (334)
Q Consensus 143 --~--~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~ 215 (334)
| ++++ +|++|+|+++++..++..++++||+|++++|+|+.|...++..|++++.++.+ +++.+|++++++.+.
T Consensus 85 ~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~ 164 (385)
T PRK09276 85 RFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVA 164 (385)
T ss_pred HhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhcc
Confidence 4 4566 59999999999999999999999999999999999999999999999999864 357789999998886
Q ss_pred cCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-c--hhhhc-CCCcEEEEcCCchhhcc
Q 019868 216 REKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-R--MEWVK-KHDNLIVLRTFSKRAGL 287 (334)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~--~~~~~-~~~~~i~i~S~SK~~gl 287 (334)
.++++|++++||||||.+++.+++++|++. +++||+||+|.+|.+++. . ....+ ..+++++++||||.||+
T Consensus 165 -~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~ 243 (385)
T PRK09276 165 -KKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNM 243 (385)
T ss_pred -ccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCC
Confidence 589999999999999999999999888764 899999999999876432 1 11122 24678999999999999
Q ss_pred cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868 288 AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 288 ~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
+|+|+||+++++++++.+.+.+.. .+++.+.|.++..+|++ ..|+
T Consensus 244 ~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 291 (385)
T PRK09276 244 TGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVV 291 (385)
T ss_pred cchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHH
Confidence 999999999999999999887664 35677899999999976 4444
No 39
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=8.5e-39 Score=305.62 Aligned_cols=248 Identities=22% Similarity=0.312 Sum_probs=203.8
Q ss_pred cHHHHHHHhCCC-CCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C--CCCCCEEEe
Q 019868 82 PFEVLSIQLGRK-PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESDHILVG 152 (334)
Q Consensus 82 ~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~--~~~~~I~~t 152 (334)
.+..+......+ +.++++|+.|++++++++.+.+++.+ ......|+++ |..+||+++|+++ | +++++|++|
T Consensus 10 ~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it 89 (374)
T PRK05839 10 KLRELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPT 89 (374)
T ss_pred HHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEe
Confidence 344455555555 55899999999999999999998875 3445778655 8899999998875 5 689999999
Q ss_pred CCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868 153 CGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 153 ~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
+|+++++..++..++ ++||.|+++.|+|+.|...++..|++++.++.+ ++|.+|+++.+ + .++|+|+++|||
T Consensus 90 ~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~ 165 (374)
T PRK05839 90 FGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L--QEVDLVILNSPN 165 (374)
T ss_pred cCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h--ccccEEEEeCCC
Confidence 999999999988765 578999999999999999999999999999964 34667665432 3 368999999999
Q ss_pred CccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh--------cCCCcEEEEcCCchhhcccccchheeE
Q 019868 229 NPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV--------KKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 229 NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~--------~~~~~~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
||||.+++.+++++|++. +++||+||+|.++.+........ ..++++++++||||.|+++|+|+||++
T Consensus 166 NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii 245 (374)
T PRK05839 166 NPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIA 245 (374)
T ss_pred CCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEe
Confidence 999999999999999875 89999999999987533221111 235799999999999999999999999
Q ss_pred cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868 297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 297 ~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
+++++++.+.+.+.. ++++.+.|.++.++|.+++|++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 284 (374)
T PRK05839 246 GDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAE 284 (374)
T ss_pred cCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHH
Confidence 999999998877653 6789999999998888776653
No 40
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=282.70 Aligned_cols=260 Identities=62% Similarity=0.956 Sum_probs=240.4
Q ss_pred CCCChHHHHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHH
Q 019868 61 LTGDSFIRSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAK 140 (334)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~ 140 (334)
.+..++++++......++.+..++.....+|+ +++.++.++++..|+|+- +...+.||++...+++.+++.
T Consensus 10 r~~i~~l~Pyrcarddf~eg~lldane~a~G~---~iv~ld~~e~~ryPdP~q------~efk~~~~d~rnk~ls~a~~~ 80 (375)
T KOG0633|consen 10 RMGISFLRPYRCARDDFQEGLLLDANEAALGR---DIVKLDANENPRYPDPEQ------MEFKYVYPDPRNKRLSDALAQ 80 (375)
T ss_pred cccccccChhhhhhhhccccceecchhhhcCC---CceEeccccCCCCcCHHH------cccccccCCcccchhhhhccc
Confidence 34667788888888899888888888887776 579999999998887764 345577899989999999999
Q ss_pred hcCCCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-C
Q 019868 141 DSGLESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-K 218 (334)
Q Consensus 141 ~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-~ 218 (334)
.-++++|+|+++.|+.+.|+.++++.|.|| ++|++..|+|.+|...+...+++|+.+|.+.+|.+|.|++.+.++.+ +
T Consensus 81 dkpLt~dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~ 160 (375)
T KOG0633|consen 81 DKPLTSDNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSK 160 (375)
T ss_pred CCCCCccceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhcccc
Confidence 989999999999999999999999999999 99999999999999999999999999999899999999999998754 7
Q ss_pred ceEEEEeCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868 219 PKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
+|++++++|+||||..+..+++.+|.+. +.+|++||+|.+|....+.+.++.+++|++++++|||.||++|+|+||..
T Consensus 161 iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~ 240 (375)
T KOG0633|consen 161 IKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGA 240 (375)
T ss_pred ceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeeccc
Confidence 9999999999999999999999999997 89999999999999888999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868 297 FPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (334)
Q Consensus 297 ~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~ 329 (334)
.+.++++.+++.+.+||+|.++..+|.++|.+.
T Consensus 241 ~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~ 273 (375)
T KOG0633|consen 241 FPLSIAEILNRAKAPYNISVAGSVAALAALSDS 273 (375)
T ss_pred ccHHHHHHHHhccCCccccchhHHHHHHhcCcc
Confidence 999999999999999999999999999999953
No 41
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.5e-38 Score=305.44 Aligned_cols=239 Identities=25% Similarity=0.300 Sum_probs=200.3
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~ 161 (334)
.+.++|+|+.|++++++++.+.+++.+ +. ....| |..|..+||+++|+++ | ++++ +|++|+|+++++..
T Consensus 30 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~ 109 (389)
T PRK08068 30 EGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVE 109 (389)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHH
Confidence 345689999999888888888888765 22 23679 5678999999999997 4 6777 89999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
++..++++||+|++++|+|..|...++..|++++.++.+ .++.+|++++++.+. +++++|++|+||||||.+++.++
T Consensus 110 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPTG~~~s~~~ 188 (389)
T PRK08068 110 LPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVA-EKAKLMYLNYPNNPTGAVATKAF 188 (389)
T ss_pred HHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhcc-ccceEEEEECCCCCCCCcCCHHH
Confidence 999999999999999999999999999999999999964 357889999999886 57999999999999999999999
Q ss_pred HHHHHhC----CCeEEEccCCcCccCCC-Cc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 240 LLKILEM----PILVVLDEAYTEFSGLE-SR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 240 l~~l~~~----~~~lIvDeay~~~~~~~-~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
+++|++. +++||+||+|.++.+++ .. ....+..+++++++||||.||++|+|+||+++++++++.+.+....
T Consensus 189 ~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~ 268 (389)
T PRK08068 189 FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDH 268 (389)
T ss_pred HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhh
Confidence 9998764 89999999999887643 22 1222335689999999999999999999999999999999888776
Q ss_pred C--CCcHHHHHHHHHHhcC-chhh
Q 019868 312 Y--NVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 312 ~--~~~~~~q~aa~~~L~~-~~~~ 332 (334)
+ +.+++.|.++..+|.+ .+++
T Consensus 269 ~~~~~~~~~q~~~~~~l~~~~~~~ 292 (389)
T PRK08068 269 LFVSLFGAIQDAAIEALLSDQSCV 292 (389)
T ss_pred ccCCCChHHHHHHHHHHhCcHHHH
Confidence 4 4455678888877753 4443
No 42
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.1e-38 Score=306.32 Aligned_cols=239 Identities=19% Similarity=0.244 Sum_probs=200.1
Q ss_pred CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (334)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~ 158 (334)
.++++|+|+.|+++ +++|+.+.+++.+ +. ....| |..|.++||+++|+++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 30 DHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 35789999999998 8999999888775 33 22568 6779999999999997 4688999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
+..++.+++++||+|++++|+|+.|...++..|++++.++. +++|.+|+++++++++ .++++++++|||||||.+++
T Consensus 110 l~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 110 AEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIAD-ENTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred HHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcc-cCCEEEEEECCCCCCCCccC
Confidence 99999999999999999999999999999999999999985 3568899999999886 67899999999999999999
Q ss_pred HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-H-HH------
Q 019868 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-SI------ 301 (334)
Q Consensus 237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~-~~------ 301 (334)
.+++++|++. +++||+||+|.+|.+++. ....+...+++++++||||.|+++|+|+||++++ + .+
T Consensus 189 ~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~ 268 (409)
T PLN00143 189 YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEI 268 (409)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHH
Confidence 9999998865 899999999999986432 2233445678999999999999999999999983 3 33
Q ss_pred HHHHHHhcCC-CCCcHHHHHHHHHHhcC--chhh
Q 019868 302 IEYLWRAKQP-YNVSVAAEVAACAALQN--PIYL 332 (334)
Q Consensus 302 i~~l~~~~~~-~~~~~~~q~aa~~~L~~--~~~~ 332 (334)
++.+.+.... ...+.++|.++.++|++ .+|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~ 302 (409)
T PLN00143 269 ADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFF 302 (409)
T ss_pred HHHHHHHHhccCCCCchHHHHHHHHHhcChHHHH
Confidence 4445444433 23588999999999975 3454
No 43
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3.8e-38 Score=308.38 Aligned_cols=240 Identities=22% Similarity=0.317 Sum_probs=198.7
Q ss_pred CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (334)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~ 158 (334)
.++++|+|+.|+++ +.+++++.+++.+ +. ..+.| |..|..+||+++|+++ ++++++|++|+|++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~a 143 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQG 143 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHH
Confidence 35679999999887 5567788877765 22 23678 6779999999999997 4789999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
|..++.++++|||+|++++|+|+.|...++..|++++.++. +++|.+|+++++++++ .++++++++|||||||.+++
T Consensus 144 l~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~-~~~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 144 IEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD-ENTVAMVVINPNNPCGNVYS 222 (462)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC-CCcEEEEEeCCCCCCCCccC
Confidence 99999999999999999999999999999999999999985 3568999999999886 67899999999999999999
Q ss_pred HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC-H-H---HHHH
Q 019868 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-L-S---IIEY 304 (334)
Q Consensus 237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~-~---~i~~ 304 (334)
.+++++|++. +++||+||+|.++.+++. ....+....++++++||||.|+++|||+||++++ + . +++.
T Consensus 223 ~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~ 302 (462)
T PLN02187 223 HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKV 302 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHH
Confidence 9999998874 899999999999886432 2222333357999999999999999999999983 3 2 3456
Q ss_pred HHHhcCCC----CCcHHHHHHHHHHhcC--chhhc
Q 019868 305 LWRAKQPY----NVSVAAEVAACAALQN--PIYLE 333 (334)
Q Consensus 305 l~~~~~~~----~~~~~~q~aa~~~L~~--~~~~~ 333 (334)
+.+.+..+ +++.+.|.++.++|++ .+|++
T Consensus 303 ~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~ 337 (462)
T PLN02187 303 LQSIKQNLDVTPDPATIIQAALPAILEKADKNFFA 337 (462)
T ss_pred HHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHH
Confidence 66666554 3489999999999974 34543
No 44
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7e-38 Score=302.26 Aligned_cols=238 Identities=18% Similarity=0.287 Sum_probs=200.8
Q ss_pred CCCeeecCCCCCC-CCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCC-CCEEEeCCHHHHHHH
Q 019868 94 PEDIVKIDANENP-YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LES-DHILVGCGADELIDL 161 (334)
Q Consensus 94 ~~~~i~l~~~~~~-~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~-~~I~~t~G~~~~i~~ 161 (334)
+.+.++|+.|+++ +++++.+.+++.+ +. ...+|++ .|.++||+++++++ | +++ ++|++|+|+++++..
T Consensus 38 ~~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~ 117 (405)
T PRK06207 38 PGRPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFL 117 (405)
T ss_pred CCCceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHH
Confidence 4678999998876 5677777777654 32 2357864 58999999999886 6 567 899999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-----CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-----SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-----~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
++.+++++||+|++++|+|+.|...++..|++++.++.+ +++++|+++++++++ .++++|++++||||||.+++
T Consensus 118 ~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~P~NPTG~~~s 196 (405)
T PRK06207 118 AVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFK-AGVRVFLFSNPNNPAGVVYS 196 (405)
T ss_pred HHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhh-hcCeEEEECCCCCCCCcCCC
Confidence 999999999999999999999999999999999999853 368899999999986 57899999999999999999
Q ss_pred HHHHHHHHhC----CCeEEEccCCcCccCCCC-c--h-hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868 237 DEDLLKILEM----PILVVLDEAYTEFSGLES-R--M-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~--~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
.+++++|++. +++||+||+|.+|.+++. . . ......+++++++||||.|+++|+|+||+++++++++.+.+.
T Consensus 197 ~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~ 276 (405)
T PRK06207 197 AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKL 276 (405)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHH
Confidence 9999888764 899999999999886432 1 1 111246899999999999999999999999999999999887
Q ss_pred cCC--CCCcHHHHHHHHHHhcCc-hhh
Q 019868 309 KQP--YNVSVAAEVAACAALQNP-IYL 332 (334)
Q Consensus 309 ~~~--~~~~~~~q~aa~~~L~~~-~~~ 332 (334)
... .+.+.+.|.++..+|+++ .|+
T Consensus 277 ~~~~~~~~~~~~q~a~~~~l~~~~~~~ 303 (405)
T PRK06207 277 QAIVSLRAAGYSQAVLRTWFSEPDGWM 303 (405)
T ss_pred HhHhccCCCHHHHHHHHHHHhCcHHHH
Confidence 765 457889999999999864 444
No 45
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.9e-38 Score=301.81 Aligned_cols=239 Identities=23% Similarity=0.246 Sum_probs=204.7
Q ss_pred HhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHHHHHHHH
Q 019868 89 QLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS-GLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 89 ~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
+++..+.++++|+.|++++.+|+.+ +++.+ +. ....| +..|.++||+++|+++ ++++++|++|+|+++++.+++.
T Consensus 20 ~~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~ 98 (373)
T PRK07324 20 TYDIAESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQNVKPENILQTNGATGANFLVLY 98 (373)
T ss_pred ccccccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHH
Confidence 4556678899999999999888777 55433 32 23578 4568999999999988 4789999999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (334)
+++++||+|+++.|+|..|...++..|++++.++.+ ++|.+|++++++.++ +++|+|++++||||||.+++.+++++
T Consensus 99 ~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~-~~~kli~i~~p~NPtG~~~~~~~l~~ 177 (373)
T PRK07324 99 ALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVR-PNTKLICINNANNPTGALMDRAYLEE 177 (373)
T ss_pred HhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCC-CCCcEEEEeCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999954 457789999999886 68999999999999999999888877
Q ss_pred HHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcH
Q 019868 243 ILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSV 316 (334)
Q Consensus 243 l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~ 316 (334)
|++. ++++|+||+|.++.+++.........+++++++||||.||++|+|+||+++++++++.+.+.+.. ++.+.
T Consensus 178 i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~ 257 (373)
T PRK07324 178 IVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAGV 257 (373)
T ss_pred HHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCCh
Confidence 7653 99999999999988754333333446789999999999999999999999999999999998875 57889
Q ss_pred HHHHHHHHHhcCc
Q 019868 317 AAEVAACAALQNP 329 (334)
Q Consensus 317 ~~q~aa~~~L~~~ 329 (334)
+.|.++..+|++.
T Consensus 258 ~~q~~a~~~l~~~ 270 (373)
T PRK07324 258 FDDMLASLALEHR 270 (373)
T ss_pred HHHHHHHHHHcCH
Confidence 9999999999863
No 46
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.1e-37 Score=299.24 Aligned_cols=243 Identities=25% Similarity=0.357 Sum_probs=206.4
Q ss_pred HHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHH
Q 019868 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGAD 156 (334)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~ 156 (334)
...+....+.++++|+.|++++++++.+.+++.+ +. ....|++ .|.++||+++|+++ + +++++|++|+|++
T Consensus 21 ~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 100 (388)
T PRK07337 21 EAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGAS 100 (388)
T ss_pred HHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcH
Confidence 3334444556789999999999888988888875 32 3356854 48999999999986 3 5889999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+++..++..++++||+|++++|+|+.+...++..|++++.++.+ ++|.+|++++++.+. +++++|++++||||||.+
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~ 179 (388)
T PRK07337 101 AALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWG-ERTRGVLLASPSNPTGTS 179 (388)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcC-ccceEEEEECCCCCCCcC
Confidence 99999999999999999999999999999888999999999864 357999999999987 688999999999999999
Q ss_pred CcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868 235 INDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~ 310 (334)
++.+++++|++. ++++|+||+|.++.+.+.........+++++++||||.||++|+|+||+++++++++.+.+...
T Consensus 180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~ 259 (388)
T PRK07337 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQ 259 (388)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHH
Confidence 999999888764 8999999999998765433233334578999999999999999999999999999999888776
Q ss_pred C--CCCcHHHHHHHHHHhcCc
Q 019868 311 P--YNVSVAAEVAACAALQNP 329 (334)
Q Consensus 311 ~--~~~~~~~q~aa~~~L~~~ 329 (334)
. .+++.++|.++..++++.
T Consensus 260 ~~~~~~s~~~q~~~~~~l~~~ 280 (388)
T PRK07337 260 NLFICASALAQHAALACFEPD 280 (388)
T ss_pred HhccCCChHHHHHHHHHhccC
Confidence 5 468999999999999754
No 47
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.1e-38 Score=309.45 Aligned_cols=261 Identities=18% Similarity=0.254 Sum_probs=207.6
Q ss_pred HHHHhhhhCCCCCCCcHHHHHHHhCC---------CCCCeeecCCCCCC----------------CCC------------
Q 019868 67 IRSHLRKLKPYQPILPFEVLSIQLGR---------KPEDIVKIDANENP----------------YGP------------ 109 (334)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~i~l~~~~~~----------------~~~------------ 109 (334)
+++++..++++. ...+...+.++.. ++.++|+|++|+|+ +..
T Consensus 10 ~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~ 88 (481)
T PTZ00377 10 INPRVVAAEYAV-RGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSL 88 (481)
T ss_pred cCHHHhhhhhhc-CChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCcccccc
Confidence 355566666653 3444444444422 45789999999995 655
Q ss_pred -CHHHHHHHhc----Cc-CCCCCC-CcChHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEE
Q 019868 110 -PPEVREALGQ----LK-FPYIYP-DPESRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVL-DPGDKIVD 175 (334)
Q Consensus 110 -~~~v~~al~~----~~-~~~~Yp-~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~ 175 (334)
|..+.+++.+ .. ....|+ ..|.++||+++|++++ +++++|++|+|+++++..++++++ ++||+|++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv 168 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMI 168 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEE
Confidence 3366665542 11 235685 4589999999999973 678999999999999999999998 79999999
Q ss_pred cCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC--
Q 019868 176 CPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-- 246 (334)
Q Consensus 176 ~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-- 246 (334)
++|+|+.|...++..|++++.++.+ ++|.+|++++++++++ .++|+|+++|||||||.+++.+++++|+++
T Consensus 169 ~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~ 248 (481)
T PTZ00377 169 PIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCY 248 (481)
T ss_pred CCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 9999999999999999999999854 4588999999998863 178999999999999999999999988875
Q ss_pred --CCeEEEccCCcCccCCC--Cchh---h---hcC----CCcEEEEcCCchh-hcccccchheeEc---CHHHHHHHHHh
Q 019868 247 --PILVVLDEAYTEFSGLE--SRME---W---VKK----HDNLIVLRTFSKR-AGLAGLRVGYGAF---PLSIIEYLWRA 308 (334)
Q Consensus 247 --~~~lIvDeay~~~~~~~--~~~~---~---~~~----~~~~i~i~S~SK~-~gl~G~R~G~l~~---~~~~i~~l~~~ 308 (334)
+++||+||+|.++.+++ .... . +.. ..++++++||||. ++++|||+||+++ ++++++.+.+.
T Consensus 249 ~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~ 328 (481)
T PTZ00377 249 EKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL 328 (481)
T ss_pred HCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH
Confidence 89999999999987632 2111 1 111 1379999999997 6999999999986 89999999887
Q ss_pred cCC-CCCcHHHHHHHHHHhcC
Q 019868 309 KQP-YNVSVAAEVAACAALQN 328 (334)
Q Consensus 309 ~~~-~~~~~~~q~aa~~~L~~ 328 (334)
+.. ++++.++|.++..+|++
T Consensus 329 ~~~~~~~~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 329 ASINLCSNVVGQLMTGLMCNP 349 (481)
T ss_pred hheecCCChHHHHHHHHHhCC
Confidence 754 58999999999999975
No 48
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=3.1e-38 Score=309.49 Aligned_cols=237 Identities=20% Similarity=0.301 Sum_probs=197.3
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcC-c-------------CCCCCCCc-ChHHHHHHHHHhcC--------CCCCCEE
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPDP-ESRRLRAALAKDSG--------LESDHIL 150 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~Yp~~-g~~~lr~~lA~~~~--------~~~~~I~ 150 (334)
+..+|+|+++||++.. +.+.+.++.. . ....|++. |.++||+++|++++ +++++|+
T Consensus 37 p~g~i~L~~~En~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Ii 115 (468)
T PLN02450 37 PSGIIQMGLAENQLSF-DLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLV 115 (468)
T ss_pred CCeeEEeehhHhHhhH-HHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeE
Confidence 4578999999999877 6666666542 1 12448765 88999999999983 6889999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeC--CCCCCCCHHHHHHhccc-----CCceEE
Q 019868 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPR--KSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~--~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
+|+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.++. +++|.+|++++++++++ .++|+|
T Consensus 116 it~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v 195 (468)
T PLN02450 116 LTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGV 195 (468)
T ss_pred EccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999999999999999988877 58999999995 46788899999988753 378999
Q ss_pred EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-Cc---hhhh--------cCCCcEEEEcCCchhhc
Q 019868 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SR---MEWV--------KKHDNLIVLRTFSKRAG 286 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~---~~~~--------~~~~~~i~i~S~SK~~g 286 (334)
++||||||||.+++.+++++|++. +++||+||+|.++.+.+ .. .... +..+++++++||||.||
T Consensus 196 ~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~ 275 (468)
T PLN02450 196 LITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLG 275 (468)
T ss_pred EEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCC
Confidence 999999999999999999999875 89999999999876543 21 2221 13579999999999999
Q ss_pred ccccchheeEcCH-HHHHHHHHhcCCCCCcHHHHHHHHHHhcCchh
Q 019868 287 LAGLRVGYGAFPL-SIIEYLWRAKQPYNVSVAAEVAACAALQNPIY 331 (334)
Q Consensus 287 l~G~R~G~l~~~~-~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~ 331 (334)
++|+|+||+++++ .+++.+.+.....+++.++|.++..+|+|++|
T Consensus 276 l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~ 321 (468)
T PLN02450 276 LPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKF 321 (468)
T ss_pred CCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchh
Confidence 9999999999975 46777777654556899999999999999754
No 49
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-37 Score=299.53 Aligned_cols=242 Identities=24% Similarity=0.304 Sum_probs=199.7
Q ss_pred HHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCC
Q 019868 86 LSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCG 154 (334)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G 154 (334)
++.+.+..+.++++|+.|.++.++|+.+.+++.+ +. ....|++ .|.++||+++|+++ + ++++ +|++|+|
T Consensus 26 ~~~~~~~~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G 105 (394)
T PRK05942 26 LKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLG 105 (394)
T ss_pred HHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccC
Confidence 3333444456789999998777767666665443 32 2367865 48899999999987 4 5677 4899999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (334)
Q Consensus 155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG 232 (334)
+++++..++.+++++||+|++++|+|+.+...+...|++++.++.+ ++|.+|++++++.+. +++|+|+++|||||||
T Consensus 106 ~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~i~l~~P~NPtG 184 (394)
T PRK05942 106 SKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVA-QQAKILYFNYPSNPTT 184 (394)
T ss_pred hHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhcc-ccceEEEEcCCCCCCC
Confidence 9999999999999999999999999999998888899999999864 457899999999886 6899999999999999
Q ss_pred cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHH
Q 019868 233 SIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 304 (334)
Q Consensus 233 ~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~ 304 (334)
.+++.+++++|++. +++||+||+|.++.+++. ....+. ..+++++++||||.||++|+|+||+++++++++.
T Consensus 185 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~ 264 (394)
T PRK05942 185 ATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQG 264 (394)
T ss_pred CcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHH
Confidence 99999998888764 899999999999886432 122222 2456799999999999999999999999999999
Q ss_pred HHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868 305 LWRAKQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 305 l~~~~~--~~~~~~~~q~aa~~~L~~ 328 (334)
+.+.+. .++++.++|.++.++|++
T Consensus 265 l~~~~~~~~~~~~~~~q~~~~~~l~~ 290 (394)
T PRK05942 265 LRTLKTNLDYGIFSALQKAAETALQL 290 (394)
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHhC
Confidence 988776 467889999999999975
No 50
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=1.3e-37 Score=300.41 Aligned_cols=240 Identities=23% Similarity=0.316 Sum_probs=197.0
Q ss_pred CCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHH
Q 019868 92 RKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELID 160 (334)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~ 160 (334)
..+.++|+|+.|++++++++.+.+++.+ +. ...+|++ .|..+||+++|+++ | ++++ +|++|+|+++++.
T Consensus 27 ~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 106 (405)
T PRK09148 27 AAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFA 106 (405)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 3456789999999999988888888765 22 2367865 48999999999987 4 5677 8999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC--CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
.++..++++||+|++++|+|+.|...+...|++++.++.+.+ +..++++..+... +++++|++++||||||.+++.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~ 185 (405)
T PRK09148 107 NMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLD 185 (405)
T ss_pred HHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999999999999999999986432 4344555444333 5789999999999999999999
Q ss_pred HHHHHHhC----CCeEEEccCCcCccCCCCch---hhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868 239 DLLKILEM----PILVVLDEAYTEFSGLESRM---EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~~---~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~ 310 (334)
++++|++. +++||+||+|.+|.+++... .... ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus 186 ~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~ 265 (405)
T PRK09148 186 FYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKS 265 (405)
T ss_pred HHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHH
Confidence 98888764 89999999999987643221 1122 2457889999999999999999999999999999988776
Q ss_pred C--CCCcHHHHHHHHHHhcC-chhh
Q 019868 311 P--YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 311 ~--~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
. ++++.+.|.++..+|++ .+|+
T Consensus 266 ~~~~~~~~~~q~~~~~~L~~~~~~~ 290 (405)
T PRK09148 266 YLDYGAFTPIQVAATAALNGPQDCI 290 (405)
T ss_pred HhccCCChHHHHHHHHHHhCcHHHH
Confidence 3 67889999999999986 3444
No 51
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=1.4e-37 Score=300.52 Aligned_cols=235 Identities=21% Similarity=0.299 Sum_probs=202.2
Q ss_pred CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADEL 158 (334)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~ 158 (334)
.+.++|+|++|+++ +++|+.+++++.+ +. ....| |..|.++||+++++++ ++++++|++|+|++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a 108 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQA 108 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHH
Confidence 46789999999997 8889999998876 33 23678 6679999999999997 3678999999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
+..++.+++++||+|++++|+|+.|...+...|++++.++.. ++|.+|++.+++.++ .+++++++++||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 109 IDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALAD-QNTVALVIINPGNPCGNVYS 187 (409)
T ss_pred HHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhc-cCceEEEEECCCCCCCCCCC
Confidence 999999999999999999999999998888899999999853 467899999999886 57899999999999999999
Q ss_pred HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC--------HHH
Q 019868 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSI 301 (334)
Q Consensus 237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~--------~~~ 301 (334)
.+++++|++. +++||+||+|.+|.+++. ....+...+++++++||||.|+++|+|+||++++ +++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~ 267 (409)
T PLN02656 188 YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKI 267 (409)
T ss_pred HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHH
Confidence 9999888775 899999999999986542 2222345578999999999999999999999983 578
Q ss_pred HHHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868 302 IEYLWRAKQP-YNVSVAAEVAACAALQN 328 (334)
Q Consensus 302 i~~l~~~~~~-~~~~~~~q~aa~~~L~~ 328 (334)
++.+.+.... .+++.++|.++..+|++
T Consensus 268 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 295 (409)
T PLN02656 268 VERIKKYFDILGGPATFIQAAVPTILEQ 295 (409)
T ss_pred HHHHHHHHhhhcCCCHHHHHHHHHHHhc
Confidence 8888877654 36889999999999974
No 52
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.3e-37 Score=298.33 Aligned_cols=236 Identities=23% Similarity=0.433 Sum_probs=202.4
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc----CCC--C-CCEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS----GLE--S-DHILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~----~~~--~-~~I~~t~G~~~~i~~~~~ 164 (334)
.++|+|+.|++++++++.+.+++.+ +. ....| |..|..+||+++++++ |++ + ++|++|+|+++++..+++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~ 108 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAIS 108 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHH
Confidence 4689999999999999999888765 22 23678 5668999999999874 653 4 689999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++.+++.++ +++++|++++||||||.+++.+++++|
T Consensus 109 ~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p~NPTG~~~s~~~~~~i 187 (384)
T PRK12414 109 ALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAIT-PRTRMIIVNTPHNPSATVFSAADLARL 187 (384)
T ss_pred HhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcC-cccEEEEEcCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999965 467899999999997 689999999999999999999999888
Q ss_pred HhC----CCeEEEccCCcCccCCCCc---hhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCC
Q 019868 244 LEM----PILVVLDEAYTEFSGLESR---MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~~---~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~ 313 (334)
++. ++++|+||+|.++.+++.. .... ...+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 188 ~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~ 267 (384)
T PRK12414 188 AQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFS 267 (384)
T ss_pred HHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhheecC
Confidence 764 8999999999998764321 1111 22568999999999999999999999999999999988774 478
Q ss_pred CcHHHHHHHHHHhcCchh
Q 019868 314 VSVAAEVAACAALQNPIY 331 (334)
Q Consensus 314 ~~~~~q~aa~~~L~~~~~ 331 (334)
++.+.|.++..+|+++++
T Consensus 268 ~s~~~q~a~~~~l~~~~~ 285 (384)
T PRK12414 268 ADTPMQHAFAEALAEPAS 285 (384)
T ss_pred CCcHHHHHHHHHhcCChH
Confidence 999999999999988654
No 53
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.8e-37 Score=297.26 Aligned_cols=239 Identities=25% Similarity=0.344 Sum_probs=201.0
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~ 161 (334)
.+.++++|+.|++++++++.+.+++.+ +. ...+|+++ |.++||+++|+++ + ++++ +|++|+|+++++..
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~ 106 (383)
T TIGR03540 27 EGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAH 106 (383)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHH
Confidence 456789999999999989988888765 22 23678664 7899999999986 3 3555 69999999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
++..++++||+|++++|+|+.|...++..|++++.++.+ +++.+|++++++.+. .++++|++++||||||.+++.++
T Consensus 107 ~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~-~~~~~v~i~~P~NPtG~~~~~~~ 185 (383)
T TIGR03540 107 IPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA-KKAKLMFINYPNNPTGAVAPLKF 185 (383)
T ss_pred HHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhcc-ccceEEEEeCCCCCcCccCCHHH
Confidence 999999999999999999999999999999999999964 357789999999886 68999999999999999999988
Q ss_pred HHHHHhC----CCeEEEccCCcCccCCCC-chh--hhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 240 LLKILEM----PILVVLDEAYTEFSGLES-RME--WVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 240 l~~l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
+++|++. ++++|+||+|.++.+.+. ... ... ..+++++++||||.||++|+|+||+++++++++.+.+.+..
T Consensus 186 ~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~ 265 (383)
T TIGR03540 186 FKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTN 265 (383)
T ss_pred HHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHh
Confidence 8888764 899999999998876431 111 122 24678999999999999999999999999999998877654
Q ss_pred --CCCcHHHHHHHHHHhcC-chhh
Q 019868 312 --YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 312 --~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
.+++.+.|.++..+|++ .+|+
T Consensus 266 ~~~~~~~~~q~~~~~~l~~~~~~~ 289 (383)
T TIGR03540 266 VDSGVFQAIQYAAIAALNGPQDVV 289 (383)
T ss_pred cccCCChHHHHHHHHHHhCCHHHH
Confidence 46788999999999987 4554
No 54
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=2.1e-37 Score=292.61 Aligned_cols=238 Identities=45% Similarity=0.778 Sum_probs=210.6
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCE
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDK 172 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~ 172 (334)
+.++|+|++|++++++||++++++.+. .....|+++..+++|+++|+++++++++|++|+|+++++..++.+++++||+
T Consensus 18 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~ 97 (346)
T TIGR01141 18 GKEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDPDPAELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDA 97 (346)
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCCCHHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCE
Confidence 357999999999999999999998863 3346787776699999999999999999999999999999999999999999
Q ss_pred EEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCe
Q 019868 173 IVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PIL 249 (334)
Q Consensus 173 Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~ 249 (334)
|++++|+|+.|...++..|++++.++.++++.+|++++++.+. +++++|++++|+||||.+++.+++.++++. +++
T Consensus 98 v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ 176 (346)
T TIGR01141 98 VLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLEDILVAID-DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDAL 176 (346)
T ss_pred EEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcC-CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcE
Confidence 9999999999998889999999999977677899999999875 689999999999999999999999999986 799
Q ss_pred EEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCc
Q 019868 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQNP 329 (334)
Q Consensus 250 lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~ 329 (334)
+|+||+|.++.............+++++++|+||.||++|+|+||+++++++++.+.+....++++.++|.++.+++++.
T Consensus 177 ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 256 (346)
T TIGR01141 177 VVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDD 256 (346)
T ss_pred EEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCH
Confidence 99999999877543333334445689999999999999999999999999999999888878899999999999999886
Q ss_pred hhh
Q 019868 330 IYL 332 (334)
Q Consensus 330 ~~~ 332 (334)
+++
T Consensus 257 ~~~ 259 (346)
T TIGR01141 257 DFI 259 (346)
T ss_pred HHH
Confidence 543
No 55
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=4.7e-37 Score=298.43 Aligned_cols=234 Identities=24% Similarity=0.370 Sum_probs=195.4
Q ss_pred CCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc------CCCCCCEEEeCCHHHHH
Q 019868 94 PEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS------GLESDHILVGCGADELI 159 (334)
Q Consensus 94 ~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i 159 (334)
+.++|+|+.|++. +++++++.+++.+ +. ....|++ .|.++||+++|+++ ++++++|++|+|++++|
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 5689999999984 7788899888775 32 2357854 58999999999997 35789999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
.+++..++++||+|++++|+|+.|...+...|++++.++. +++|.+|++.+++.++ +++++++++|||||||.+++.
T Consensus 131 ~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~P~NPtG~v~~~ 209 (430)
T PLN00145 131 EIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALAD-ENTVAMVIINPNNPCGSVYSY 209 (430)
T ss_pred HHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhC-cCceEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999874 4568999999999886 689999999999999999999
Q ss_pred HHHHHHHhC----CCeEEEccCCcCccCCC-C--chhhhcCCCcEEEEcCCchhhcccccchheeEc--CHHHH------
Q 019868 238 EDLLKILEM----PILVVLDEAYTEFSGLE-S--RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSII------ 302 (334)
Q Consensus 238 ~~l~~l~~~----~~~lIvDeay~~~~~~~-~--~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--~~~~i------ 302 (334)
+++++|++. +++||+||+|.+|.++. . ....+...+++++++||||.|+++|||+||+++ ++.++
T Consensus 210 ~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~ 289 (430)
T PLN00145 210 EHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVV 289 (430)
T ss_pred HHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHH
Confidence 988888764 99999999999988643 2 222234567899999999999999999999997 44443
Q ss_pred HHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868 303 EYLWRAKQP-YNVSVAAEVAACAALQN 328 (334)
Q Consensus 303 ~~l~~~~~~-~~~~~~~q~aa~~~L~~ 328 (334)
+.+.+.... .+++.+.|.++..+|++
T Consensus 290 ~~~~~~~~~~~~~~~~~Q~a~~~~l~~ 316 (430)
T PLN00145 290 DSIRNYLNISTDPATFVQGAIPQIIAN 316 (430)
T ss_pred HHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence 344444433 35788999999999986
No 56
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=3.3e-37 Score=298.26 Aligned_cols=235 Identities=20% Similarity=0.292 Sum_probs=199.3
Q ss_pred CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCCCCc-ChHHHHHHHHHhcC------------CCCCCEEEe
Q 019868 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIYPDP-ESRRLRAALAKDSG------------LESDHILVG 152 (334)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Yp~~-g~~~lr~~lA~~~~------------~~~~~I~~t 152 (334)
.+.++|+|+.|+++ +.+++.+.+++.+ +. ....|+++ |..+||+++|++++ +++++|++|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it 110 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence 45788999999986 5678888888876 32 24679765 89999999999875 678999999
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868 153 CGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (334)
Q Consensus 153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP 230 (334)
+|+++++.+++..++++||+|+++.|+|..|...++..|++++.++.+ +++++|++++++.++ .++++|+++|||||
T Consensus 111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~-~~~~~i~~~~p~NP 189 (412)
T PTZ00433 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVD-DRTKALIMTNPSNP 189 (412)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhc-cCceEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999999853 468999999999886 57999999999999
Q ss_pred cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEc------
Q 019868 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF------ 297 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~------ 297 (334)
||.+++.+++++|++. +++||+||+|.+|.+++.. ........++++++||||.||++|+|+||+++
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 9999999999888764 8999999999998864321 12222334689999999999999999999997
Q ss_pred CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868 298 PLSIIEYLWRAKQP-YNVSVAAEVAACAALQN 328 (334)
Q Consensus 298 ~~~~i~~l~~~~~~-~~~~~~~q~aa~~~L~~ 328 (334)
++++++.+.+.... ++++.+.|.++..+|.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 270 GGDFLDGMKRLGMLVCGPCSVVQAALGEALLN 301 (412)
T ss_pred HHHHHHHHHHHhhccCCCChHHHHHHHHHHhc
Confidence 24688888776553 68999999999999975
No 57
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-37 Score=296.34 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=201.2
Q ss_pred HHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc--CCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeC
Q 019868 85 VLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK--FPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGC 153 (334)
Q Consensus 85 ~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~--~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~ 153 (334)
..+......+.++++|+.|+++.+.++.+.+++.+ .. ....|++ .|..+||+++|+++ + ++++ +|++|+
T Consensus 23 ~~~~~~~~~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~ 102 (403)
T PRK08636 23 ELKMAARRAGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATM 102 (403)
T ss_pred HHHHHHHhcCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECC
Confidence 34444445567789999998887777766666543 32 2467965 58999999999987 5 5677 799999
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHH----HHhccc--CCceEEEEe
Q 019868 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELI----ADAVER--EKPKCIFLT 225 (334)
Q Consensus 154 G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l----~~~l~~--~~~~~i~l~ 225 (334)
|+++++..++.+++++||.|++++|+|+.|...++..|++++.++. ++++++|++.+ ++++++ .++++++++
T Consensus 103 G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~ 182 (403)
T PRK08636 103 GSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVN 182 (403)
T ss_pred ChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEe
Confidence 9999999999999999999999999999999999999999999985 35588998754 555532 478999999
Q ss_pred CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcC-CCcEEEEcCCchhhcccccchheeEc
Q 019868 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAF 297 (334)
Q Consensus 226 ~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~ 297 (334)
+||||||.+++.+++++|++. +++||+||+|.++.+++. ....++. .+++++++||||.||++|+|+||+++
T Consensus 183 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~ 262 (403)
T PRK08636 183 FPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG 262 (403)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeC
Confidence 999999999999999999875 899999999999886532 1222222 35778899999999999999999999
Q ss_pred CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868 298 PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 298 ~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
++++++.+.+.... ++++.+.|.++..++++ .+|+
T Consensus 263 ~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~ 300 (403)
T PRK08636 263 NKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCV 300 (403)
T ss_pred CHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHH
Confidence 99999998887653 67788899999888864 3443
No 58
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=4e-37 Score=294.32 Aligned_cols=234 Identities=29% Similarity=0.446 Sum_probs=200.5
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCC-CcChHHHHHHHHHhcC------CCCC-CEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYP-DPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp-~~g~~~lr~~lA~~~~------~~~~-~I~~t~G~~~~i~~~~~ 164 (334)
.++|+|+.|++++++++.+.+++.+ +. ....|+ ..|.++||+++|++++ ++++ +|++|+|+++++.+++.
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMR 99 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 4679999999999988888877765 22 235684 5789999999999973 4565 79999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (334)
+++++||+|++++|+|+.|...++..|++++.++.+ +++++|++++++++. ++++++++++||||||.+++.+++++
T Consensus 100 ~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~s~~~~~~ 178 (378)
T PRK07682 100 AIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAIT-AKTKAILLCSPNNPTGAVLNKSELEE 178 (378)
T ss_pred HhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcC-cccEEEEEECCCCCcCcCcCHHHHHH
Confidence 999999999999999999999999999999999853 468999999999986 58999999999999999999999988
Q ss_pred HHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868 243 ILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (334)
Q Consensus 243 l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~ 313 (334)
|++. ++++|+||+|.++.+++.. ....+..+++++++||||.||++|+|+||+++++++++.+.+.... ++
T Consensus 179 l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~ 258 (378)
T PRK07682 179 IAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMC 258 (378)
T ss_pred HHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccC
Confidence 8764 8999999999999875432 1222235789999999999999999999999999999998876653 57
Q ss_pred CcHHHHHHHHHHhcCc
Q 019868 314 VSVAAEVAACAALQNP 329 (334)
Q Consensus 314 ~~~~~q~aa~~~L~~~ 329 (334)
++.++|.++.++|++.
T Consensus 259 ~~~~~q~a~~~~l~~~ 274 (378)
T PRK07682 259 APTMAQFAALEALRAG 274 (378)
T ss_pred CCHHHHHHHHHHHhCC
Confidence 8999999999999874
No 59
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=4.3e-37 Score=296.42 Aligned_cols=239 Identities=20% Similarity=0.296 Sum_probs=199.8
Q ss_pred CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhcC-----CCCCCEEEeCCHHHHH
Q 019868 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG-----LESDHILVGCGADELI 159 (334)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~~-----~~~~~I~~t~G~~~~i 159 (334)
+++++++|+.|+++ +++++.+.+++.+ +. ....| |..|..+||+++|++++ +++++|++|+|+++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 29 PEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred cCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 34678999999884 7888999888875 22 22568 67799999999999986 7889999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
.+++.+++++||+|++++|+|..|...++..|++++.++.+ +++++|++.+++.++ .+++++++++||||||.+++.
T Consensus 109 ~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~ 187 (401)
T TIGR01264 109 EMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLID-EKTAALIVNNPSNPCGSVFSR 187 (401)
T ss_pred HHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhc-cCceEEEEcCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999998753 458999999999886 578999999999999999999
Q ss_pred HHHHHHHhC----CCeEEEccCCcCccCCCC-chh--hhcCCCcEEEEcCCchhhcccccchheeEcCH------HHHHH
Q 019868 238 EDLLKILEM----PILVVLDEAYTEFSGLES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL------SIIEY 304 (334)
Q Consensus 238 ~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~------~~i~~ 304 (334)
+++++|++. +++||+||+|.+|.+++. ... ......++++++||||.|+++|+|+||+++++ ++++.
T Consensus 188 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~ 267 (401)
T TIGR01264 188 QHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDG 267 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHH
Confidence 999988874 899999999999986432 222 22223469999999999999999999999864 46666
Q ss_pred HHHhcC-CCCCcHHHHHHHHHHhcC--chhh
Q 019868 305 LWRAKQ-PYNVSVAAEVAACAALQN--PIYL 332 (334)
Q Consensus 305 l~~~~~-~~~~~~~~q~aa~~~L~~--~~~~ 332 (334)
+.+... .++++.++|.++..+|++ .+|+
T Consensus 268 ~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l 298 (401)
T TIGR01264 268 LVKLSQRILGPCTIVQGALPSILLRTPQEYF 298 (401)
T ss_pred HHHHhhccCCCCcHHHHHHHHHHHhCcHHHH
Confidence 666554 467899999999999976 3444
No 60
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=5.4e-37 Score=290.61 Aligned_cols=236 Identities=25% Similarity=0.382 Sum_probs=200.2
Q ss_pred eeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHHHhc
Q 019868 97 IVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~~l~ 167 (334)
+++|+.|++++++++++.+++++ ......|+++ |..+||+++++++ | ++++ +|++|+|+++++..++..++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHc
Confidence 58999999999999999999886 3344679765 7899999999986 5 5677 99999999999999999999
Q ss_pred CCC---CEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868 168 DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (334)
Q Consensus 168 ~~g---d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (334)
++| |+|+++.|+|+.|...++..|++++.++.+ +++.+|++++++++. .++|++++++||||||.+++.+++++
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~~~i~i~~p~NPtG~~~~~~~~~~ 160 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSIL-EETKIVWINYPHNPTGATAPRSYLKE 160 (350)
T ss_pred CCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhh-hccEEEEEeCCCCCcCcccCHHHHHH
Confidence 887 699999999999999999999999999964 457789999999986 58999999999999999999888888
Q ss_pred HHhC----CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC--CCc
Q 019868 243 ILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVS 315 (334)
Q Consensus 243 l~~~----~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~--~~~ 315 (334)
|++. ++++|+||+|.++.++....... .+.+++++++||||.||++|+|+||+++++++++.+.+.+..+ +.+
T Consensus 161 l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~ 240 (350)
T TIGR03537 161 TIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP 240 (350)
T ss_pred HHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCC
Confidence 8764 89999999999876543222111 1357999999999999999999999999999999998877654 455
Q ss_pred HHHHHHHHHHhcCchhhc
Q 019868 316 VAAEVAACAALQNPIYLE 333 (334)
Q Consensus 316 ~~~q~aa~~~L~~~~~~~ 333 (334)
.+.|.++.++|.+.+|++
T Consensus 241 ~~~q~~~~~~l~~~~~~~ 258 (350)
T TIGR03537 241 DFVQAAAKAAWSDDNHVL 258 (350)
T ss_pred HHHHHHHHHHhCCcHHHH
Confidence 578898888888766653
No 61
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.8e-37 Score=289.01 Aligned_cols=210 Identities=24% Similarity=0.357 Sum_probs=178.7
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEE
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVD 175 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~ 175 (334)
++|+|+.|+||++.. ....+||++...+||+++|+++++++++|++|+|+++++..++. ++++|+ |++
T Consensus 17 ~~i~l~~Nenp~~~~----------~~~~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~~~~~-vv~ 84 (332)
T PRK06425 17 RIIDFSANINDFMDI----------GDISIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YINVGN-III 84 (332)
T ss_pred CEEEeccccCCCcCh----------hhcccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-HhCCCc-EEE
Confidence 589999999999522 22367999989999999999999999999999999999999997 567764 667
Q ss_pred cCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEE
Q 019868 176 CPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVV 251 (334)
Q Consensus 176 ~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lI 251 (334)
++|+|+.|...++..|++++.+|.++ +.+|.+.+++ .++|+|++||||||||.+++.+++++|++. +++||
T Consensus 85 ~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI 159 (332)
T PRK06425 85 VEPNFNEYKGYAFTHGIRISALPFNL-INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLF 159 (332)
T ss_pred eCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEE
Confidence 79999999999999999999999753 4566555542 478999999999999999999999998864 89999
Q ss_pred EccCCcCccCCC--CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHH
Q 019868 252 LDEAYTEFSGLE--SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAA 322 (334)
Q Consensus 252 vDeay~~~~~~~--~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa 322 (334)
+||+|.+|.++. +........+++++++||||.||++|+|+||+++++++++.+.+...+++++.+++.++
T Consensus 160 ~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l 232 (332)
T PRK06425 160 IDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPWSVCDPAIDFI 232 (332)
T ss_pred EecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCCCccCHHHHHHH
Confidence 999999998643 23334445689999999999999999999999999999999999888888877766544
No 62
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=4.1e-37 Score=289.21 Aligned_cols=231 Identities=22% Similarity=0.275 Sum_probs=190.1
Q ss_pred CcHHHHHHHhCCCCCCeeecCCCCCCCCCCH-HHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHH
Q 019868 81 LPFEVLSIQLGRKPEDIVKIDANENPYGPPP-EVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI 159 (334)
Q Consensus 81 ~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~-~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i 159 (334)
.....++..+|.+..++|+|+.|++|+++++ .+.+. . ...||+.. .+||++++++++. ++|++|+|++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~i~l~~ne~p~~~~~~~~~~~--~---~~~yp~~~-~~Lr~~ia~~~~~--~~I~it~Gs~~al 77 (330)
T PRK05664 6 GRLRRAAQRYGIPLADWLDLSTGIAPWPWPVPAIPAD--A---WARLPETD-DGLEAAARAYYGA--PQLLPVAGSQAAI 77 (330)
T ss_pred chHHHHHHHcCCCHHHheeecCCcCCCCCCCcccCHH--H---HHhCCCCh-HHHHHHHHHHhCC--CCEEECcCHHHHH
Confidence 3344556666665567899999999988763 22211 1 14488754 8999999999985 6999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
.+++. +.+||+|++++|+|+.|...++..|++++.++. +++++.++ +++++++++||||||.+++.++
T Consensus 78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~--------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~ 145 (330)
T PRK05664 78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDE--------AEVEAALD--SLDVLVVVNPNNPTGRRFDPAR 145 (330)
T ss_pred HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEech--------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHH
Confidence 98864 589999999999999999999999999999874 23455553 5789999999999999999999
Q ss_pred HHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCc
Q 019868 240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS 315 (334)
Q Consensus 240 l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~ 315 (334)
+++|++. +++||+||+|.++....+... ....+++++++||||.||++|+|+||+++++++++.+.+...+++++
T Consensus 146 l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~-~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~~~~ 224 (330)
T PRK05664 146 LLAWHARLAARGGWLVVDEAFMDNTPQHSLAA-CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPWTVS 224 (330)
T ss_pred HHHHHHHHHhcCCEEEEECCcccCCCcccccc-cccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCCCCC
Confidence 9999753 899999999988764333222 33467899999999999999999999999999999999988888999
Q ss_pred HHHHHHHHHHhcCchhh
Q 019868 316 VAAEVAACAALQNPIYL 332 (334)
Q Consensus 316 ~~~q~aa~~~L~~~~~~ 332 (334)
.++|.++.++|++.++.
T Consensus 225 ~~~~~~~~~~L~~~~~~ 241 (330)
T PRK05664 225 GPTRWLAQAALADTPWQ 241 (330)
T ss_pred HHHHHHHHHHHhChHHH
Confidence 99999999999986654
No 63
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2.4e-37 Score=300.86 Aligned_cols=234 Identities=20% Similarity=0.251 Sum_probs=196.8
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCCc-ChHHHHHHHHHhcC--CC-CCCEEEeCCHHHHHHHHHHHhcCC
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-KFPYIYPDP-ESRRLRAALAKDSG--LE-SDHILVGCGADELIDLIMRCVLDP 169 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~~-g~~~lr~~lA~~~~--~~-~~~I~~t~G~~~~i~~~~~~l~~~ 169 (334)
..+++|+.|.++.+++|.+.+++.+. .....|+++ |..+||++++++++ +. +++|++|+|++++|..++.++++|
T Consensus 85 ~~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~p 164 (431)
T PRK15481 85 TPLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLP 164 (431)
T ss_pred chhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCC
Confidence 45789999988877777788887763 333568654 78999999999986 33 469999999999999999999999
Q ss_pred CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC--
Q 019868 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-- 246 (334)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~-- 246 (334)
||.|++++|+|+.|...++..|++++.++.+++ ++|++.++++++ .++|+++++ +||||||.+++.+++++|+++
T Consensus 165 gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-g~~~~~l~~~~~-~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~ 242 (431)
T PRK15481 165 GDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE-GMQPEKLERALA-QGARAVILTPRAHNPTGCSLSARRAAALRNLLA 242 (431)
T ss_pred CCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC-CCCHHHHHHHHh-cCCCEEEECCCCCCCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999997544 689999999986 578999998 999999999999977766553
Q ss_pred ---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHH
Q 019868 247 ---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVA 321 (334)
Q Consensus 247 ---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~a 321 (334)
+++||+||+|.+|.+.+.........+++++++||||.|| +|+|+||+++++++++.+.+.... +++|.++|.+
T Consensus 243 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a 321 (431)
T PRK15481 243 RYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALG-PDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDL 321 (431)
T ss_pred hcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHH
Confidence 7899999999999754321111124579999999999999 999999999999999998766554 5689999999
Q ss_pred HHHHhcCchh
Q 019868 322 ACAALQNPIY 331 (334)
Q Consensus 322 a~~~L~~~~~ 331 (334)
+.++|++++|
T Consensus 322 ~~~~l~~~~~ 331 (431)
T PRK15481 322 VYACLTDPEY 331 (431)
T ss_pred HHHHHhCccH
Confidence 9999998765
No 64
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=1.9e-36 Score=292.28 Aligned_cols=247 Identities=22% Similarity=0.329 Sum_probs=198.0
Q ss_pred HHHHHHHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhc------CCCCCCEEE
Q 019868 83 FEVLSIQLGRKPEDIVKIDANEN---PYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDS------GLESDHILV 151 (334)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~------~~~~~~I~~ 151 (334)
+...+.+....+.++++|+.|++ ++++++.+.+++.+ +.....|+++ |.++||+++|+++ ++++++|++
T Consensus 21 ~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~ 100 (404)
T PRK09265 21 VLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYI 100 (404)
T ss_pred HHHHHHHHHHcCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEE
Confidence 33344444445568899999866 56688888887764 3344678655 7899999999998 688999999
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNN 229 (334)
Q Consensus 152 t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~N 229 (334)
|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.++ .++++|++++|||
T Consensus 101 t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~P~N 179 (404)
T PRK09265 101 GNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT-PRTKAIVIINPNN 179 (404)
T ss_pred eCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhcc-ccceEEEEECCCC
Confidence 9999999999999999999999999999999999999999999988743 357899999999886 6799999999999
Q ss_pred ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEc--CHH
Q 019868 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLS 300 (334)
Q Consensus 230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--~~~ 300 (334)
|||.+++.+++++|++. ++++|+||+|.++.+++. .........++++++||||.||++|+|+||+++ +++
T Consensus 180 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~ 259 (404)
T PRK09265 180 PTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKK 259 (404)
T ss_pred CCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchH
Confidence 99999998888777654 899999999999876432 122222334789999999999999999999996 443
Q ss_pred ----HHHHHHHhcC-CCCCcHHHHHHHHHHhcCch
Q 019868 301 ----IIEYLWRAKQ-PYNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 301 ----~i~~l~~~~~-~~~~~~~~q~aa~~~L~~~~ 330 (334)
+++.+..... .+++|.++|.++.++|.+.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 294 (404)
T PRK09265 260 HAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQ 294 (404)
T ss_pred HHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCch
Confidence 4444443322 36789999999999998643
No 65
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.6e-37 Score=304.30 Aligned_cols=240 Identities=24% Similarity=0.377 Sum_probs=193.3
Q ss_pred CCCCeeecCCCCCCC--CC-CHHHHHHHhc-------C---cCCCCCCC-cChHHHHHHHHHhcC--------CCCCCEE
Q 019868 93 KPEDIVKIDANENPY--GP-PPEVREALGQ-------L---KFPYIYPD-PESRRLRAALAKDSG--------LESDHIL 150 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~--~~-~~~v~~al~~-------~---~~~~~Yp~-~g~~~lr~~lA~~~~--------~~~~~I~ 150 (334)
.+..+|+|+.+||++ .. ++.+++.... + .....|++ .|.++||+++|++++ +++++|+
T Consensus 44 np~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Iv 123 (496)
T PLN02376 44 NPHGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVV 123 (496)
T ss_pred CCCceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEE
Confidence 345789999999988 43 4455543321 1 11234643 488999999999874 7899999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeCC--CCCCCCHHHHHHhcc-----cCCceEE
Q 019868 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVE-----REKPKCI 222 (334)
Q Consensus 151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~~--~~~~~d~~~l~~~l~-----~~~~~~i 222 (334)
+|+|+++++..++.++++|||.|++++|+|+.|...+. ..|++++.++.+ ++|++|++.++++++ ..++|+|
T Consensus 124 it~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l 203 (496)
T PLN02376 124 MSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGL 203 (496)
T ss_pred EccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEE
Confidence 99999999999999999999999999999999998777 589999999963 568999999986642 1478999
Q ss_pred EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-Cchh---hhcC-------CCcEEEEcCCchhhcc
Q 019868 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-SRME---WVKK-------HDNLIVLRTFSKRAGL 287 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~~~~---~~~~-------~~~~i~i~S~SK~~gl 287 (334)
+++|||||||.+++.+++++|++. +++||+||+|.++.+.+ .... .... .+++++++||||.||+
T Consensus 204 ~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~gl 283 (496)
T PLN02376 204 ILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGL 283 (496)
T ss_pred EEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCC
Confidence 999999999999999999998875 89999999999987543 2211 2111 1467889999999999
Q ss_pred cccchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868 288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 288 ~G~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~ 332 (334)
+|+|+||+++ ++.+.+.+.+....+.++.++|.++.++|++++|+
T Consensus 284 pGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~ 329 (496)
T PLN02376 284 PGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFV 329 (496)
T ss_pred CcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHH
Confidence 9999999999 56676766666655678999999999999998774
No 66
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-36 Score=290.05 Aligned_cols=237 Identities=25% Similarity=0.391 Sum_probs=202.3
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCCC-cChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
.++++|+.|++++++++.+.+++.+. . ....|++ .|.++||+++++++ | +++++|++|+|+++++..++..
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~ 103 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQA 103 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHH
Confidence 46899999999999999999998763 2 2245854 58999999999986 5 7889999999999999999999
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (334)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (334)
++++||+|++++|+|..|...++..|++++.++.+ .+|.+|++++++.++ .++++|++++||||||.+++.+++++
T Consensus 104 l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~i~l~~p~NPtG~~~~~~~~~~ 182 (382)
T PRK06108 104 LVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAIT-PRTRALFINSPNNPTGWTASRDDLRA 182 (382)
T ss_pred hcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcC-ccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999864 357799999999886 58999999999999999999999888
Q ss_pred HHhC----CCeEEEccCCcCccCC-CCc----hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--C
Q 019868 243 ILEM----PILVVLDEAYTEFSGL-ESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (334)
Q Consensus 243 l~~~----~~~lIvDeay~~~~~~-~~~----~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~ 311 (334)
|++. ++++|+||+|.++.++ +.. .......+++++++||||.||++|+|+||+++++++++.+.+... .
T Consensus 183 l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~ 262 (382)
T PRK06108 183 ILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT 262 (382)
T ss_pred HHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc
Confidence 8764 8999999999998764 211 122233578999999999999999999999999999998887654 3
Q ss_pred CCCcHHHHHHHHHHhcCc-hhh
Q 019868 312 YNVSVAAEVAACAALQNP-IYL 332 (334)
Q Consensus 312 ~~~~~~~q~aa~~~L~~~-~~~ 332 (334)
++++.+.|.++..+|++. +++
T Consensus 263 ~~~~~~~q~a~~~~l~~~~~~~ 284 (382)
T PRK06108 263 SCVAQFVQRAAVAALDEGEDFV 284 (382)
T ss_pred cCCChHHHHHHHHHHhCChHHH
Confidence 568999999999999874 443
No 67
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-36 Score=290.04 Aligned_cols=238 Identities=26% Similarity=0.386 Sum_probs=201.4
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c--CCCCCC-CcChHHHHHHHHHhc----CC--C-CCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP-DPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Yp-~~g~~~lr~~lA~~~----~~--~-~~~I~~t~G~~~~i~~~~ 163 (334)
.++++|+.|++++++++.+.+++.+. . ....|+ ..|.+++|+++++++ |+ + +++|++|+|+++++..++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~ 106 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAI 106 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHH
Confidence 35799999999999999999988752 2 224684 558888888888765 65 3 678999999999999999
Q ss_pred HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
..++++||+|++++|+|..+...++..|++++.++.++++.+|++++++.++ +++|+|++++||||||.+++.+++++|
T Consensus 107 ~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~klv~~~~p~NPtG~~~~~~~~~~i 185 (389)
T PRK05957 107 LAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTDDNYQLQPEAIEQAIT-PKTRAIVTISPNNPTGVVYPEALLRAV 185 (389)
T ss_pred HHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCCCCcCHHHHHHhcC-cCceEEEEeCCCCCCCcCcCHHHHHHH
Confidence 9899999999999999999988888899999999987788999999999997 689999999999999999998887777
Q ss_pred HhC----CCeEEEccCCcCccCCCC----chhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868 244 LEM----PILVVLDEAYTEFSGLES----RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~----~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~ 313 (334)
++. ++++|+||+|.+|.++.. .....+..+++++++||||.||++|+|+||+++++++++++.+.... .+
T Consensus 186 ~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~ 265 (389)
T PRK05957 186 NQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILIC 265 (389)
T ss_pred HHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccC
Confidence 654 899999999999986531 11222445789999999999999999999999999999999887765 46
Q ss_pred CcHHHHHHHHHHhcCc-hhhc
Q 019868 314 VSVAAEVAACAALQNP-IYLE 333 (334)
Q Consensus 314 ~~~~~q~aa~~~L~~~-~~~~ 333 (334)
++.+.|.++..+|+++ +|++
T Consensus 266 ~~~~~q~~~~~~l~~~~~~~~ 286 (389)
T PRK05957 266 PPVVSQYAALGALQVGKSYCQ 286 (389)
T ss_pred CCcHHHHHHHHHHhCChHHHH
Confidence 7889999999999874 4543
No 68
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.1e-36 Score=291.31 Aligned_cols=243 Identities=26% Similarity=0.385 Sum_probs=200.9
Q ss_pred HhCCCCCCeeecCCCCC---CCCCCHHHHHHHhcC-c-CCCCCC-CcChHHHHHHHHHhc------CCCCCCEEEeCCHH
Q 019868 89 QLGRKPEDIVKIDANEN---PYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGAD 156 (334)
Q Consensus 89 ~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~-~-~~~~Yp-~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~ 156 (334)
+.+..+.++|+|+.|++ ++++++.+.+++.+. . ....|+ ..|..+||+++++++ ++++++|++|+|++
T Consensus 24 ~~~~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~ 103 (398)
T PRK08363 24 ELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVT 103 (398)
T ss_pred HHHhcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 33445678999999998 788899999888762 2 235684 668999999999997 36889999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee-C-CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP-R-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~-~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+++..++.+++++||.|++++|+|..|...++..|++++.++ . ++++.+|++++++.++ +++++|++++||||||.+
T Consensus 104 ~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~ 182 (398)
T PRK08363 104 EALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKIT-EKTKAIAVINPNNPTGAL 182 (398)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCC-cceEEEEEECCCCCCCcC
Confidence 999999999999999999999999999999999999998884 3 3457899999999986 578999999999999999
Q ss_pred CcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchhhcccccchheeEc--CHHHHHHHH
Q 019868 235 INDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLW 306 (334)
Q Consensus 235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~--~~~~i~~l~ 306 (334)
++.+++++|++. ++++|+||+|.++.+++.. ...+...+++++++||||.|+++|+|+||+++ ++++++.+.
T Consensus 183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~ 262 (398)
T PRK08363 183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVR 262 (398)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHH
Confidence 998888887764 8999999999998764422 22333456899999999999999999999997 777766655
Q ss_pred HhcC-----CCCCcHHHHHHHHHHhcC-chhh
Q 019868 307 RAKQ-----PYNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 307 ~~~~-----~~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
+... .++++.++|.++.++|.+ .+|+
T Consensus 263 ~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l 294 (398)
T PRK08363 263 EAIDKLARIRLCPNTPAQFAAIAGLTGPMDYL 294 (398)
T ss_pred HHHHHHhcccccCChHHHHHHHHHHhCChHHH
Confidence 4321 367899999999999975 4554
No 69
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-36 Score=286.32 Aligned_cols=226 Identities=27% Similarity=0.379 Sum_probs=194.7
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd 171 (334)
..+++||+.|+|++++|+.+++++.+ +.....||+. |..+||+++|+++++++++|++|+|+++++..+++ +++|
T Consensus 21 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l~~~- 97 (349)
T PRK07908 21 GPGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPSTEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--LRPR- 97 (349)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCCccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--cCCC-
Confidence 45789999999999999999999876 3344678764 89999999999999999999999999999999988 4664
Q ss_pred EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEE
Q 019868 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVV 251 (334)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lI 251 (334)
.++++.|+|..+...++..|++++.++.++++.+|++.+ + .++++++++|||||||.+++.+++.++++.+.++|
T Consensus 98 ~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~-~~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iI 172 (349)
T PRK07908 98 RAAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV----P-DDADLVVIGNPTNPTSVLHPAEQLLALRRPGRILV 172 (349)
T ss_pred eEEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh----c-cCCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEE
Confidence 567789999999999999999999999766688998854 2 46889999999999999999999999998788999
Q ss_pred EccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868 252 LDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (334)
Q Consensus 252 vDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~ 328 (334)
+||+|.++.... ..... ...+++++++||||.||++|+|+||+++++++++.+.+....++++++.|.++.+++++
T Consensus 173 vDe~y~~~~~~~-~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 249 (349)
T PRK07908 173 VDEAFADAVPGE-PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAP 249 (349)
T ss_pred EECcchhhccCC-ccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcc
Confidence 999999886432 11111 24568999999999999999999999999999999998888888999999988888874
No 70
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=2e-36 Score=290.37 Aligned_cols=245 Identities=21% Similarity=0.296 Sum_probs=205.5
Q ss_pred HHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhcC------CCCCCEEEeCCHH
Q 019868 87 SIQLGRKPEDIVKIDANENPYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGAD 156 (334)
Q Consensus 87 ~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~ 156 (334)
..+....+.+.++|+.|++++.+++.+.+++.+. .....| +..|.++||++++++++ +++++|++|+|++
T Consensus 21 ~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 100 (386)
T PRK07550 21 LAGYDGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCN 100 (386)
T ss_pred HHHHhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcH
Confidence 3444445667899999999998888888887752 233568 56699999999999873 6789999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+++..++.+++++||+|+++.|+|..+...++..|++++.++.+ +++.+|++++++.++ .++++|++++||||||.+
T Consensus 101 ~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~~~~P~NPtG~~ 179 (386)
T PRK07550 101 QAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALIT-PRTRAIALVTPNNPTGVV 179 (386)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhc-ccCcEEEEeCCCCCCCcc
Confidence 99999999999999999999999999999999999999999964 457789999999997 578999999999999999
Q ss_pred CcHHHHHHHHhC----CCeEEEccCCcCccCCCC-chhhh---cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 235 INDEDLLKILEM----PILVVLDEAYTEFSGLES-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 235 ~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~~~~~---~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
++.+++++|++. +++||+||+|.+|.+... ..... +..+++++++||||.||++|+|+||+++++++++.+.
T Consensus 180 ~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~ 259 (386)
T PRK07550 180 YPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIE 259 (386)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHH
Confidence 998888887764 999999999999875321 11121 2356899999999999999999999999999999888
Q ss_pred HhcCC--CCCcHHHHHHHHHHhcC-chhh
Q 019868 307 RAKQP--YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 307 ~~~~~--~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
+.... .+++.++|.++..+|++ .+|+
T Consensus 260 ~~~~~~~~~~s~~~q~~~~~~l~~~~~~~ 288 (386)
T PRK07550 260 KFMDTVAICAPRIGQIAVAWGLPNLADWR 288 (386)
T ss_pred HHHhhcccCCCcHHHHHHHHHhccHHHHH
Confidence 87764 46789999999999987 4554
No 71
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=3.4e-36 Score=292.81 Aligned_cols=242 Identities=19% Similarity=0.247 Sum_probs=192.1
Q ss_pred HHhCCCCCCeeecCCCCC---CCCCCHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCC
Q 019868 88 IQLGRKPEDIVKIDANEN---PYGPPPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS------GLESDHILVGCG 154 (334)
Q Consensus 88 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G 154 (334)
++....+.++++++.|++ ++++|+.+.+++.+. .....| |..|.++||+++|+++ .+++++|++|+|
T Consensus 25 ~~~~~~g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G 104 (433)
T PRK06855 25 KKLEKLGVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNG 104 (433)
T ss_pred HHHHhccccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCc
Confidence 334344567899999998 678999988887763 233568 5679999999999987 367899999999
Q ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-HHCCCeEEEeeCC--CCCCCCHHHHHHhccc-CCceEEEEeCCCCc
Q 019868 155 ADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-AVNGAAVVKVPRK--SDFSLNVELIADAVER-EKPKCIFLTSPNNP 230 (334)
Q Consensus 155 ~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NP 230 (334)
+++++..++. ++++||+|++++|+|+.|.... ...|++++.++.+ ++|.+|++++++.++. .+++++++++||||
T Consensus 105 ~~~al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NP 183 (433)
T PRK06855 105 LGDAIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNP 183 (433)
T ss_pred HHHHHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCC
Confidence 9999999986 7899999999999999887553 3468998888853 4588999999999863 36799999999999
Q ss_pred cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC-c--hhhhcCCCcEEEEcCCchhhcccccchheeEcC-----
Q 019868 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES-R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP----- 298 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~-~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~----- 298 (334)
||.+++.+++++|++. +++||+||+|.++.+++. . ...+....++|+++||||.|+++|||+||++++
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence 9999999999999864 999999999999986432 1 222222246899999999999999999999973
Q ss_pred H---HHHHHHHHhcC-CCCCcHHHHHHHHHHhcCch
Q 019868 299 L---SIIEYLWRAKQ-PYNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 299 ~---~~i~~l~~~~~-~~~~~~~~q~aa~~~L~~~~ 330 (334)
+ .+++.+..... ..+++.+.|.++.++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~ 299 (433)
T PRK06855 264 EVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPE 299 (433)
T ss_pred hHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCc
Confidence 2 23344433332 24678999999999998753
No 72
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-36 Score=286.95 Aligned_cols=237 Identities=21% Similarity=0.320 Sum_probs=199.4
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-C-cCCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-L-KFPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~-~~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~ 164 (334)
.++++|+.|.++.+.|+.+.+++.+ + .....|++ .|.++||+++++++ | ++++ +|++|+|+++++..++.
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 105 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALL 105 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHH
Confidence 4679999999998878888777654 2 23367865 48999999999986 3 5777 99999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
.++++||+|++++|+|+.|...++..|++++.++.+ +++.+|++++++.+. .++++|++++||||||.+++.+++++|
T Consensus 106 ~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~~i 184 (387)
T PRK08912 106 ALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFS-PRTKAVLLNNPLNPAGKVFPREELALL 184 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhC-ccceEEEEeCCCCCcCcccCHHHHHHH
Confidence 999999999999999999999999999999999864 468999999999886 588999999999999999999998888
Q ss_pred HhC----CCeEEEccCCcCccCCCC-c--hhhh-cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868 244 LEM----PILVVLDEAYTEFSGLES-R--MEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~-~--~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~ 313 (334)
++. ++++|+||+|.++.+++. . .... ...+++++++||||.||++|+|+||+++++++++.+.+.... ++
T Consensus 185 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~ 264 (387)
T PRK08912 185 AEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFT 264 (387)
T ss_pred HHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccc
Confidence 764 899999999998876431 1 1122 225789999999999999999999999999999998877654 67
Q ss_pred CcHHHHHHHHHHhcC-chhh
Q 019868 314 VSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 314 ~~~~~q~aa~~~L~~-~~~~ 332 (334)
.++..|.++.++|.+ .+|+
T Consensus 265 ~~~~~q~~~~~~l~~~~~~~ 284 (387)
T PRK08912 265 TPPNLQAAVAYGLGKPDDYF 284 (387)
T ss_pred CChHHHHHHHHHHhCCHHHH
Confidence 788888888888754 4554
No 73
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.6e-36 Score=293.18 Aligned_cols=227 Identities=26% Similarity=0.406 Sum_probs=184.7
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHH
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELI 159 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i 159 (334)
+.++++|+.|++++++++.+.+++.+ +. ....| |..|.++||+++|+++ ++++++|++|+|+++++
T Consensus 33 ~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al 112 (409)
T PRK07590 33 EAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDT 112 (409)
T ss_pred CCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHH
Confidence 45689999999999999988887765 21 23568 6779999999999986 67899999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCe-----------EEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeC
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-----------VVKVPRKS--DFSLNVELIADAVEREKPKCIFLTS 226 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~-----------v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~ 226 (334)
.+++. ++++||+|++++|+|+.|...++..|++ ++.++.+. ++.+|++ .+++|+|++|+
T Consensus 113 ~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~-------~~~~k~i~l~n 184 (409)
T PRK07590 113 GNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP-------EEKVDIIYLCF 184 (409)
T ss_pred HHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc-------ccCceEEEEeC
Confidence 98764 6789999999999999999999999987 88888642 3444432 25789999999
Q ss_pred CCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcC-CCcEEEEcCCchhhcccccchheeEcC
Q 019868 227 PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 227 p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~ 298 (334)
||||||.+++.+++++|++. +++||+||+|.+|.+++.. ....+. .+++|+++||||.||++|+|+||++++
T Consensus 185 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~ 264 (409)
T PRK07590 185 PNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVP 264 (409)
T ss_pred CCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcC
Confidence 99999999999999999864 8999999999998864422 222222 357999999999999999999999999
Q ss_pred HHHHHHH------------HH-hcCC-CCCcHHHHHHHHHHhcC
Q 019868 299 LSIIEYL------------WR-AKQP-YNVSVAAEVAACAALQN 328 (334)
Q Consensus 299 ~~~i~~l------------~~-~~~~-~~~~~~~q~aa~~~L~~ 328 (334)
+++++.+ .. .... .+++.++|.++.++|++
T Consensus 265 ~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 265 KELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred HHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 9998721 11 1222 36899999999999975
No 74
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=2.4e-36 Score=287.61 Aligned_cols=239 Identities=26% Similarity=0.406 Sum_probs=195.0
Q ss_pred HHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCC-cChHHHHHHHHHhc----C---CCCCCEEEeCC
Q 019868 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G---LESDHILVGCG 154 (334)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~-~g~~~lr~~lA~~~----~---~~~~~I~~t~G 154 (334)
+..++......+.++++|+.|++..+.++.+.+++.+.....+|++ .|.++||+++|+++ + +++++|++|+|
T Consensus 15 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G 94 (364)
T PRK07865 15 LAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADAPGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIG 94 (364)
T ss_pred HHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhhCCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccC
Confidence 3334444444556789999998777777888888876433357865 48899999999997 3 66899999999
Q ss_pred HHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 155 ~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
+++++..++..+ +++||.|++++|+|+.|...++..|++++.++. +++++ ..++++|++++||||||.
T Consensus 95 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-------~~~l~----~~~~~~v~~~~p~NPtG~ 163 (364)
T PRK07865 95 SKELVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRADS-------LTELG----PQRPALIWLNSPSNPTGR 163 (364)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecCC-------hhhCC----cccceEEEEcCCCCCCCc
Confidence 999999988887 799999999999999999999999999988752 23322 257899999999999999
Q ss_pred CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh------cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV------KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 234 ~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~------~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
+++.+++++|++. +++||+||+|.++.+++...... ...+++++++||||.||++|+|+||+++++++++
T Consensus 164 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~ 243 (364)
T PRK07865 164 VLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVA 243 (364)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHH
Confidence 9999999988764 89999999999988654322211 1347899999999999999999999999999999
Q ss_pred HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868 304 YLWRAKQP--YNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~ 332 (334)
.+.+.+.. ++++.+.|.++.++|++.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 274 (364)
T PRK07865 244 ELLEVRKHAGMMVPAPVQAAMVAALGDDAHV 274 (364)
T ss_pred HHHHHHHhcCCCcCHHHHHHHHHHhCCHHHH
Confidence 98876643 678999999999999986654
No 75
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-36 Score=288.12 Aligned_cols=235 Identities=25% Similarity=0.429 Sum_probs=201.0
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
.++|+|+.|++++++++.+.+++.+. . ....| |..|.++||+++|+++ ++++++|++|+|+++++..++..
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~ 112 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFES 112 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHH
Confidence 46899999999999889888888763 2 22457 7779999999999987 46789999999999999999999
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
++++||+|++++|+|..+...++..|++++.++.+. +|.+|++++++.++ .+++++++++||||||.+++.+++++|
T Consensus 113 l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~~~v~i~~p~NPtG~~~~~~~~~~l 191 (391)
T PRK08361 113 LLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELIT-KRTRMIVINYPNNPTGATLDKEVAKAI 191 (391)
T ss_pred hcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcc-cccEEEEEeCCCCCCCcCcCHHHHHHH
Confidence 999999999999999999999999999999998643 57899999999997 578999999999999999998887777
Q ss_pred HhC----CCeEEEccCCcCccCCC-Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCc
Q 019868 244 LEM----PILVVLDEAYTEFSGLE-SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVS 315 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~-~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~ 315 (334)
++. ++++|+||+|.+|.+++ ....... ..+++++++||||.||++|+|+||+++++++++.+.+.... ++++
T Consensus 192 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
T PRK08361 192 ADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVA 271 (391)
T ss_pred HHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCC
Confidence 653 89999999999987532 2222221 34789999999999999999999999999999988776543 6889
Q ss_pred HHHHHHHHHHhcCch
Q 019868 316 VAAEVAACAALQNPI 330 (334)
Q Consensus 316 ~~~q~aa~~~L~~~~ 330 (334)
.+.|.++..+|++++
T Consensus 272 ~~~q~~~~~~l~~~~ 286 (391)
T PRK08361 272 SFVQIAGIEALRSKE 286 (391)
T ss_pred hHHHHHHHHHhcCCc
Confidence 999999999998864
No 76
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=7.1e-36 Score=286.71 Aligned_cols=234 Identities=26% Similarity=0.432 Sum_probs=199.9
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCC-CCcChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIY-PDPESRRLRAALAKDS----G--LESD-HILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~~~~~ 164 (334)
+.+|+|+.|.+.+++++.+.+++.+. . ....| |..|..+||+++|+++ | ++++ +|++|+|+++++.+++.
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~ 107 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFR 107 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 46799999999888888888888763 2 33568 4678999999999987 4 4777 99999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
.++++||+|++++|+|..|...++..|++++.++.+ +++.+|.+++++.++ .+++++++++||||||.+++.+++++|
T Consensus 108 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~i~i~~p~NPtG~~~s~~~~~~l 186 (387)
T PRK07683 108 TILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAIT-EKTRCVVLPYPSNPTGVTLSKEELQDI 186 (387)
T ss_pred HhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcC-cCceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999864 567789999999886 578999999999999999999999888
Q ss_pred HhC----CCeEEEccCCcCccCCCCchh---hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCC
Q 019868 244 LEM----PILVVLDEAYTEFSGLESRME---WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNV 314 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~~~~---~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~ 314 (334)
++. ++++|+||+|.++.+.+.... ..+..+++++++||||.||++|+|+||+++++++++.+.+.... .++
T Consensus 187 ~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~ 266 (387)
T PRK07683 187 ADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCA 266 (387)
T ss_pred HHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCC
Confidence 774 899999999999876432222 22345789999999999999999999999999999998876543 456
Q ss_pred cHHHHHHHHHHhcCc
Q 019868 315 SVAAEVAACAALQNP 329 (334)
Q Consensus 315 ~~~~q~aa~~~L~~~ 329 (334)
+.++|.++..+|+++
T Consensus 267 ~~~~q~~~~~~l~~~ 281 (387)
T PRK07683 267 SSISQYAALEALTAG 281 (387)
T ss_pred ChHHHHHHHHHHhCC
Confidence 889999999999764
No 77
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=6.1e-36 Score=287.03 Aligned_cols=237 Identities=24% Similarity=0.418 Sum_probs=201.8
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCC-CcChHHHHHHHHHhc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K-FPYIYP-DPESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp-~~g~~~lr~~lA~~~----~~--~~~-~I~~t~G~~~~i~~~~~ 164 (334)
.++|+|+.|++++++++.+.+++.+. . ....|+ ..|.++||+++++++ ++ +++ +|++|+|+++++..++.
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~ 109 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAIL 109 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHH
Confidence 46799999999999888888888763 2 235684 558999999999864 54 344 89999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
.++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.++ +++++|++++||||||.+++.+++++|
T Consensus 110 ~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~~i 188 (386)
T PRK09082 110 ALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIS-PRTRLIILNTPHNPSGTVWSAADMRAL 188 (386)
T ss_pred HHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcC-ccceEEEEeCCCCCCCcCCCHHHHHHH
Confidence 999999999999999999999999999999999964 468999999999997 579999999999999999999999888
Q ss_pred HhC----CCeEEEccCCcCccCCCC---ch-hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCC
Q 019868 244 LEM----PILVVLDEAYTEFSGLES---RM-EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYN 313 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~---~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~ 313 (334)
++. ++++|+||+|.++.+++. .. ......+++++++||||.||++|+|+||+++++++++.+.+... .++
T Consensus 189 ~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~ 268 (386)
T PRK09082 189 WQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFT 268 (386)
T ss_pred HHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCC
Confidence 764 899999999999886432 11 12223579999999999999999999999999999999988774 478
Q ss_pred CcHHHHHHHHHHhc-Cchhh
Q 019868 314 VSVAAEVAACAALQ-NPIYL 332 (334)
Q Consensus 314 ~~~~~q~aa~~~L~-~~~~~ 332 (334)
++.+.|.++..+|+ +++++
T Consensus 269 ~~~~~q~~~~~~l~~~~~~~ 288 (386)
T PRK09082 269 VNTPAQLALADYLRAEPEHY 288 (386)
T ss_pred CChHHHHHHHHHHhCChHHH
Confidence 99999999999997 55554
No 78
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-35 Score=286.13 Aligned_cols=235 Identities=26% Similarity=0.368 Sum_probs=198.1
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCC-CcChHHHHHHHHHhc-----CCCCCCEEEeCCHHHHHHHHHHHh
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYP-DPESRRLRAALAKDS-----GLESDHILVGCGADELIDLIMRCV 166 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp-~~g~~~lr~~lA~~~-----~~~~~~I~~t~G~~~~i~~~~~~l 166 (334)
+.++++|+.|++++++++.+.+++.+. .....|+ ..|.+++|+++++++ ++++++|++|+|+++++..++..+
T Consensus 29 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l 108 (397)
T PRK07568 29 GIKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAI 108 (397)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHh
Confidence 356899999999999999999988763 3345685 458999999999997 578899999999999999999999
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCC-CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFS-LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~-~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
+++||+|++++|+|..|...++..|++++.++.+ +++. .|+++++++++ +++++|++++||||||.+++.+++++|
T Consensus 109 ~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~i 187 (397)
T PRK07568 109 CDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLIT-PKTKAILISNPGNPTGVVYTKEELEML 187 (397)
T ss_pred cCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcC-ccceEEEEECCCCCCCccCCHHHHHHH
Confidence 9999999999999999998888999999999863 3344 36899999886 688999999999999999999888888
Q ss_pred HhC----CCeEEEccCCcCccCCCC-c--hhhhc-CCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC-CC
Q 019868 244 LEM----PILVVLDEAYTEFSGLES-R--MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP-YN 313 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~-~--~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~-~~ 313 (334)
++. ++++|+||+|.+|.+++. . ..... ..+++++++||||.||++|+|+||++++ +++++.+.+.... ++
T Consensus 188 ~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~ 267 (397)
T PRK07568 188 AEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLS 267 (397)
T ss_pred HHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCC
Confidence 764 899999999999976432 1 11222 3679999999999999999999999984 7888877665543 78
Q ss_pred CcHHHHHHHHHHhcCc
Q 019868 314 VSVAAEVAACAALQNP 329 (334)
Q Consensus 314 ~~~~~q~aa~~~L~~~ 329 (334)
++.+.|.++..+|++.
T Consensus 268 ~s~~~q~~~~~~l~~~ 283 (397)
T PRK07568 268 PPTLEQIGAAALLDTP 283 (397)
T ss_pred CCcHHHHHHHHHhhCC
Confidence 8999999999999863
No 79
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=3.7e-36 Score=285.64 Aligned_cols=239 Identities=26% Similarity=0.394 Sum_probs=196.6
Q ss_pred HHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCc-ChHHHHHHHHHhc-------CCCCCCEEEeCC
Q 019868 83 FEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDS-------GLESDHILVGCG 154 (334)
Q Consensus 83 ~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~-g~~~lr~~lA~~~-------~~~~~~I~~t~G 154 (334)
+-.++.+....+.++++|+.|++..++++.+.+++++......|+++ |.++||+++++++ ++++++|++|+|
T Consensus 9 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G 88 (357)
T TIGR03539 9 LAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADAPGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIG 88 (357)
T ss_pred HHHHHHHhhhCCCCeEEccCCCCCCCCCHHHHHHHHHHHhhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccC
Confidence 33445555556678899999988888888888888764344678654 7899999999987 477899999999
Q ss_pred HHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 155 ADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 155 ~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
+++++..++..+ +++||.|++++|+|+.|...++..|++++.++ |++.+ ...++++|++++|+||||.
T Consensus 89 ~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~-------~~~~l----~~~~~~~v~~~~p~NPtG~ 157 (357)
T TIGR03539 89 TKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------DPTEL----DPVGPDLIWLNSPGNPTGR 157 (357)
T ss_pred hHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC-------Chhhc----CccCccEEEEeCCCCCcCc
Confidence 999999998877 69999999999999999999999999988874 22322 2257899999999999999
Q ss_pred CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhc------CCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 234 IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVK------KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 234 ~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~------~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
+++.+++++|++. ++++|+||+|.+|.+.+.....+. ..+++++++||||.|+++|+|+||+++++++++
T Consensus 158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~ 237 (357)
T TIGR03539 158 VLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVA 237 (357)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHH
Confidence 9999998888764 899999999998876443222221 346899999999999999999999999999999
Q ss_pred HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868 304 YLWRAKQP--YNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 304 ~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~ 332 (334)
.+.+.+.. ++++.++|.++.++|++..++
T Consensus 238 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 268 (357)
T TIGR03539 238 ELLTVRKHAGLMVPAPVQAAMVAALGDDGHV 268 (357)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHcCCHHHH
Confidence 88877643 678999999999999885544
No 80
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.5e-35 Score=284.74 Aligned_cols=236 Identities=28% Similarity=0.413 Sum_probs=199.6
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc----CC--C-CCCEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS----GL--E-SDHILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~----~~--~-~~~I~~t~G~~~~i~~~~~ 164 (334)
.++|+|+.|++++++++.+.+++.+ +. ....| |..|.++||+++++++ ++ + +++|++|+|+++++.+++.
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~ 109 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLT 109 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHH
Confidence 4689999999999999988888775 32 22468 5568999999999987 33 3 4789999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
.++++||+|++++|+|..|...++..|++++.++.+. ++.+|++.+++++++ +++++|++++||||||.+++.++++
T Consensus 110 ~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~ 189 (391)
T PRK07309 110 AILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIK 189 (391)
T ss_pred HhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999999999999999999999999998643 578999999998863 3689999999999999999988888
Q ss_pred HHHhC----CCeEEEccCCcCccCCC-Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CC
Q 019868 242 KILEM----PILVVLDEAYTEFSGLE-SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YN 313 (334)
Q Consensus 242 ~l~~~----~~~lIvDeay~~~~~~~-~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~ 313 (334)
+|++. ++++|+||+|.++.+++ ....... ..+++++++||||.||++|+|+||+++++++++.+.+.... .+
T Consensus 190 ~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~ 269 (391)
T PRK07309 190 ALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTA 269 (391)
T ss_pred HHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccC
Confidence 88764 99999999999998643 2222211 34789999999999999999999999999999998876543 56
Q ss_pred CcHHHHHHHHHHhcCch
Q 019868 314 VSVAAEVAACAALQNPI 330 (334)
Q Consensus 314 ~~~~~q~aa~~~L~~~~ 330 (334)
++.++|.++..+|++..
T Consensus 270 ~~~~~q~~~~~~l~~~~ 286 (391)
T PRK07309 270 ATTMAQFAAVEALTNGK 286 (391)
T ss_pred CChHHHHHHHHHHhCCh
Confidence 89999999999998753
No 81
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.1e-36 Score=288.24 Aligned_cols=237 Identities=18% Similarity=0.197 Sum_probs=186.3
Q ss_pred CCeeecCCCCC-CCCCCH----HHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc---C---CCCCCEE--EeCCHHH
Q 019868 95 EDIVKIDANEN-PYGPPP----EVREALGQL---KFPYIY-PDPESRRLRAALAKDS---G---LESDHIL--VGCGADE 157 (334)
Q Consensus 95 ~~~i~l~~~~~-~~~~~~----~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~---~---~~~~~I~--~t~G~~~ 157 (334)
+++++|+.|.+ +++++. .+.+++... ....+| |..|.++||+++|+++ + +++++|+ .|.|+++
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~ 108 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTG 108 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcch
Confidence 57799999986 355443 344454332 123678 5669999999999986 2 4778998 4889999
Q ss_pred HHHHHHH---HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC-C-CCCCCCHHHHHHhccc--CCceEEEEeCCCCc
Q 019868 158 LIDLIMR---CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR-K-SDFSLNVELIADAVER--EKPKCIFLTSPNNP 230 (334)
Q Consensus 158 ~i~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~-~-~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NP 230 (334)
++..++. .++++||+|++++|+|+.|...++..|++++.++. + +++++|++.+++.+++ ++++++++++||||
T Consensus 109 al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NP 188 (404)
T PTZ00376 109 ALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNP 188 (404)
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 9888864 56899999999999999999999999999999996 2 4589999999998853 34577778999999
Q ss_pred cccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC---Cc--hhh-hcCCCcEEEEcCCchhhcccccchhee---Ec
Q 019868 231 DGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---SR--MEW-VKKHDNLIVLRTFSKRAGLAGLRVGYG---AF 297 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~---~~--~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l---~~ 297 (334)
||.+++.+++++|++. +++||+||+|.+|.+++ .. ... ....+++++++||||.|+++|||+||+ ++
T Consensus 189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~ 268 (404)
T PTZ00376 189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA 268 (404)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence 9999999999999874 89999999999998743 11 111 223468999999999999999999999 56
Q ss_pred CHHHHHH----HHHhc-CCC-CCcHHHHHHHHHHhcCchh
Q 019868 298 PLSIIEY----LWRAK-QPY-NVSVAAEVAACAALQNPIY 331 (334)
Q Consensus 298 ~~~~i~~----l~~~~-~~~-~~~~~~q~aa~~~L~~~~~ 331 (334)
++++++. +.+.. ..+ +.+.++|.++..+|++++|
T Consensus 269 ~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 308 (404)
T PTZ00376 269 NKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPEL 308 (404)
T ss_pred CHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHH
Confidence 8775554 33332 233 5688999999999998643
No 82
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-35 Score=285.13 Aligned_cols=239 Identities=24% Similarity=0.364 Sum_probs=201.3
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhcC-c-CCCCCCC-cChHHHHHHHHHhc----CC--CCCCEEEeCCHHHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-FPYIYPD-PESRRLRAALAKDS----GL--ESDHILVGCGADELIDLIM 163 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-~~~~Yp~-~g~~~lr~~lA~~~----~~--~~~~I~~t~G~~~~i~~~~ 163 (334)
.+.++++|+.|.+++++++.+.+++.+. . ...+|++ .|.++||+++++++ |+ ++++|++|+|+++++..++
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~ 110 (402)
T PRK06107 31 AGRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLAL 110 (402)
T ss_pred ccCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHH
Confidence 3567899999999999889888887763 2 3356855 58999999999875 44 6889999999999999999
Q ss_pred HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
.+++++||+|++++|+|..|...+...|.+++.++.+ ++|.+|++++++.+. +++++|++++||||||.+++.++++
T Consensus 111 ~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~v~l~~p~NPtG~~~s~~~~~ 189 (402)
T PRK06107 111 MATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAIT-PRTRWLILNAPSNPTGAVYSRAELR 189 (402)
T ss_pred HHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcC-cCceEEEEECCCCCCCcCcCHHHHH
Confidence 9999999999999999999998888889988888753 457899999999986 6889999999999999999999998
Q ss_pred HHHhC-----CCeEEEccCCcCccCCCCc-h--hhh-c-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 242 KILEM-----PILVVLDEAYTEFSGLESR-M--EWV-K-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 242 ~l~~~-----~~~lIvDeay~~~~~~~~~-~--~~~-~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
++++. ++++|+||+|.++.+.+.. . ... . ..+++++++||||.||++|+|+||+++++++++.+.+.+..
T Consensus 190 ~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~ 269 (402)
T PRK06107 190 ALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQ 269 (402)
T ss_pred HHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHh
Confidence 88763 6899999999988754321 1 111 1 24689999999999999999999999999999999888764
Q ss_pred --CCCcHHHHHHHHHHhcC-chhh
Q 019868 312 --YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 312 --~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
++++.+.|.++..+|++ ..|+
T Consensus 270 ~~~~~s~~~q~~~~~~l~~~~~~~ 293 (402)
T PRK06107 270 SSSCPSSISQAAAAAALNGDQSFV 293 (402)
T ss_pred cccCCChHHHHHHHHHhcCChHHH
Confidence 67999999999999974 4443
No 83
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-35 Score=284.53 Aligned_cols=258 Identities=27% Similarity=0.425 Sum_probs=211.4
Q ss_pred HHHhhhhCCCCCCCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhc--
Q 019868 68 RSHLRKLKPYQPILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQ-LK-FPYIY-PDPESRRLRAALAKDS-- 142 (334)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~-- 142 (334)
++++..+.++. +..+...+.+....+.++++|+.|++++++++.+.+++.+ +. ....| +..|..+||+++|+++
T Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 83 (393)
T PRK05764 5 SKRVSRVTPSA-TLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKR 83 (393)
T ss_pred hhhhhhcCchH-HHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHH
Confidence 44454444442 2333334444444456789999999999988999888775 32 33458 4568999999999987
Q ss_pred ----CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc
Q 019868 143 ----GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER 216 (334)
Q Consensus 143 ----~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~ 216 (334)
++++++|++|+|+++++..++.+++++||+|++++|+|..|...++..|++++.++.+ +++.+|++++++.++
T Consensus 84 ~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~- 162 (393)
T PRK05764 84 DNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAIT- 162 (393)
T ss_pred HhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhC-
Confidence 4678899999999999999999999999999999999999999999999999999964 457899999999986
Q ss_pred CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC---chhh--hcCCCcEEEEcCCchhhcc
Q 019868 217 EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGL 287 (334)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~gl 287 (334)
+++++|++++||||||.+++.+++++|++. ++++|+||+|.++.+++. .... .+..+++++++||||.||+
T Consensus 163 ~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~ 242 (393)
T PRK05764 163 PKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAM 242 (393)
T ss_pred ccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccC
Confidence 688999999999999999998888888764 899999999999876432 1222 2335789999999999999
Q ss_pred cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 288 AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 288 ~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
+|+|+||+++++++++.+.+.... ++++.++|.++..+|+
T Consensus 243 ~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~ 284 (393)
T PRK05764 243 TGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALN 284 (393)
T ss_pred ccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHc
Confidence 999999999999999999877654 5789999999999997
No 84
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=7e-36 Score=290.96 Aligned_cols=239 Identities=22% Similarity=0.316 Sum_probs=195.2
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhcC-c-------------CCCCCCC-cChHHHHHHHHHhcC--------CCCCCE
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQL-K-------------FPYIYPD-PESRRLRAALAKDSG--------LESDHI 149 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~-~-------------~~~~Yp~-~g~~~lr~~lA~~~~--------~~~~~I 149 (334)
.+..+|+|++.||.+-- +.+.+.++.. . ....|.+ .|.++||+++|++++ +++++|
T Consensus 45 np~g~i~l~~aeN~l~~-d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 45 NPSGVIQMGLAENQVSF-DLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred CCCceEEEechhhhhhH-HHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 45679999999997642 4445544431 1 1133644 489999999999872 688999
Q ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH-HCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceE
Q 019868 150 LVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA-VNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKC 221 (334)
Q Consensus 150 ~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~ 221 (334)
++|+|+++++.+++.++++|||.|+++.|+|+.|...+. ..|+++++|+.+ ++|.+|++++++++++ .++|+
T Consensus 124 vit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~ 203 (447)
T PLN02607 124 VLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRG 203 (447)
T ss_pred EEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeE
Confidence 999999999999999999999999999999999988776 479999999854 4578999999998863 47899
Q ss_pred EEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCC----chhhh------cCCCcEEEEcCCchhhcc
Q 019868 222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLES----RMEWV------KKHDNLIVLRTFSKRAGL 287 (334)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~----~~~~~------~~~~~~i~i~S~SK~~gl 287 (334)
|+++|||||||.+++.+++++|++. ++++|+||+|.++.++.. ..... +..+++++++||||.||+
T Consensus 204 lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~ 283 (447)
T PLN02607 204 VLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGL 283 (447)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCC
Confidence 9999999999999999999998875 899999999998765432 11111 115789999999999999
Q ss_pred cccchheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhh
Q 019868 288 AGLRVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 288 ~G~R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~ 332 (334)
+|+|+||+++ ++++++.+.+......+|.++|.++..+|+|++|.
T Consensus 284 ~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~ 329 (447)
T PLN02607 284 PGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFT 329 (447)
T ss_pred CcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhH
Confidence 9999999998 77888888777655578999999999999998765
No 85
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=6.7e-36 Score=288.25 Aligned_cols=231 Identities=23% Similarity=0.375 Sum_probs=186.3
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhc-Cc------CCCCC-CCcChHHHHHHHHHhc---CCCCCCEEEeCCHHHHHHHH
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQ-LK------FPYIY-PDPESRRLRAALAKDS---GLESDHILVGCGADELIDLI 162 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~-~~------~~~~Y-p~~g~~~lr~~lA~~~---~~~~~~I~~t~G~~~~i~~~ 162 (334)
+.++++|+.|++++++++.+.+++.+ +. ....| |..|.++||+++|+++ ++++++|++|+|+++++..+
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al~~l 111 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDVFRL 111 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHHHHH
Confidence 46789999999999999988887764 21 12458 7779999999999986 78999999999999999987
Q ss_pred HHHhcCCCCEEEEcCCCChhHHHHHHHCCC-----------eEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-----------AVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPNN 229 (334)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~-----------~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~N 229 (334)
+. ++.+||+|++++|+|..|...++..|+ +++.++.+ +++.+|++. ..++++|+++||||
T Consensus 112 ~~-l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------~~~~~~i~l~nP~N 184 (402)
T TIGR03542 112 QS-LFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE------EPKIDIIYLCSPNN 184 (402)
T ss_pred HH-hcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc------cCCceEEEEeCCCC
Confidence 54 678999999999999999999999999 99988854 245555321 14789999999999
Q ss_pred ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcC-CCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
|||.+++.+++++|++. +++||+||+|.+|.+++.. ....+. .+++++++||||.||++|+|+||+++++++
T Consensus 185 PTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l 264 (402)
T TIGR03542 185 PTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKEL 264 (402)
T ss_pred CCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHH
Confidence 99999999999998874 8999999999999864421 112222 468999999999999999999999999987
Q ss_pred H--------HHHHH-hcCC-CCCcHHHHHHHHHHhcCchh
Q 019868 302 I--------EYLWR-AKQP-YNVSVAAEVAACAALQNPIY 331 (334)
Q Consensus 302 i--------~~l~~-~~~~-~~~~~~~q~aa~~~L~~~~~ 331 (334)
+ +.+.+ .... .+++.++|.++..+|++..+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~ 304 (402)
T TIGR03542 265 TYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGL 304 (402)
T ss_pred hhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcch
Confidence 7 22222 2222 46899999999999987543
No 86
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=2.3e-35 Score=277.36 Aligned_cols=238 Identities=33% Similarity=0.478 Sum_probs=204.2
Q ss_pred CCcHHHHHHHhCCCCCCeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHH
Q 019868 80 ILPFEVLSIQLGRKPEDIVKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELI 159 (334)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i 159 (334)
+.+++..++++|.+++++++|+.|+|++++| ..+. ......+||++..+++|+++++++++++++|++|+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i 77 (330)
T TIGR01140 2 GGNLRRAAARYGIPPEDWLDFSTGINPLGPP--VPPI--PASAWARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAI 77 (330)
T ss_pred CccHHHHHHHcCCChhheeEccccCCCCCCC--hhhc--chHHHhhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHH
Confidence 5678888999999888999999999999876 2111 11223668877669999999999999999999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
..+... +.+| .|++++|+|..|...++..|++++.++ |++++++.++ +++++++++||||||.+++.++
T Consensus 78 ~~~~~~-l~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~ 146 (330)
T TIGR01140 78 YLLPRL-LAPG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPET 146 (330)
T ss_pred HHHHHH-hCCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHH
Confidence 998775 5777 699999999999999999999999987 7899998884 5789999999999999999999
Q ss_pred HHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCc
Q 019868 240 LLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVS 315 (334)
Q Consensus 240 l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~ 315 (334)
+++|++. ++++|+||+|.++....+.....+..+++++++||||.||++|+|+||+++++++++.+......++++
T Consensus 147 ~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s 226 (330)
T TIGR01140 147 LLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVN 226 (330)
T ss_pred HHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCch
Confidence 9988764 899999999998886433333333468899999999999999999999999999999999888788999
Q ss_pred HHHHHHHHHHhcCchhh
Q 019868 316 VAAEVAACAALQNPIYL 332 (334)
Q Consensus 316 ~~~q~aa~~~L~~~~~~ 332 (334)
.++|.++..++++++|.
T Consensus 227 ~~~q~~~~~~l~~~~~~ 243 (330)
T TIGR01140 227 GPARAAGRAALADTAWQ 243 (330)
T ss_pred HHHHHHHHHHHhchHHH
Confidence 99999999999988774
No 87
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=2.3e-35 Score=275.14 Aligned_cols=215 Identities=27% Similarity=0.418 Sum_probs=182.9
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD 171 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd 171 (334)
.+.++|+|+.|+|+++ |+.+.+++.+ ......||. ...+|++++++++ ++|++|+|+++++..++. ++.+||
T Consensus 6 ~~~~~i~l~~~~np~~-p~~~~~a~~~~~~~~~~yp~--~~~l~~~ia~~~~---~~I~vt~G~~~al~~~~~-~~~~gd 78 (311)
T PRK08354 6 REEGLIDFSASVNPYP-PEWLDEMFERAKEISGRYTY--YEWLEEEFSKLFG---EPIVITAGITEALYLIGI-LALRDR 78 (311)
T ss_pred CccceeEecCCCCCCC-CHHHHHHHHHHHHHhhcCCC--hHHHHHHHHHHHC---CCEEECCCHHHHHHHHHH-hhCCCC
Confidence 4567899999999996 5788888865 333356875 5789999999998 479999999999998886 445899
Q ss_pred EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868 172 KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (334)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~ 247 (334)
+|++++|+|+.|...++..|++++.++ +|++.+++.++ +++++++++||||||.+++.+++++|++. +
T Consensus 79 ~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~l~~~~~--~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~ 150 (311)
T PRK08354 79 KVIIPRHTYGEYERVARFFAARIIKGP------NDPEKLEELVE--RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRN 150 (311)
T ss_pred eEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHHHHHhhc--CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcC
Confidence 999999999999999999999997753 57899988875 56789999999999999999999999875 8
Q ss_pred CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~ 327 (334)
+++|+||+|.+|.+++... ..+++++++||||.||++|+|+||+++ .++.+.+.+.++.++.+++.++.++++
T Consensus 151 ~~li~De~y~~f~~~~~~~----~~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~l~~~~~~~~~~~~~~~~~~~~~~ 223 (311)
T PRK08354 151 ALLILDEAFIDFVKKPESP----EGENIIKLRTFTKSYGLPGIRVGYVKG---FEEAFRSVRMPWSIGSTGYAFLEFLIE 223 (311)
T ss_pred cEEEEeCcchhcccccccc----CCCcEEEEeccHhhcCCccceeeeeee---hHHHHHHcCCCccCCHHHHHHHHHHHH
Confidence 9999999999998754221 267999999999999999999999998 667777778888899999999988887
Q ss_pred Cc
Q 019868 328 NP 329 (334)
Q Consensus 328 ~~ 329 (334)
+.
T Consensus 224 ~~ 225 (311)
T PRK08354 224 DD 225 (311)
T ss_pred hH
Confidence 53
No 88
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-35 Score=291.61 Aligned_cols=202 Identities=23% Similarity=0.305 Sum_probs=166.5
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCCC-cChHHHHHHHHHhc------C-C-C--CCCEEEeCCHHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS------G-L-E--SDHILVGCGADELIDLIMR 164 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~-~g~~~lr~~lA~~~------~-~-~--~~~I~~t~G~~~~i~~~~~ 164 (334)
++|+|+.|++++++|+.+.++...+. +..||. .|..++|+++++++ + . . .++|++|+|+++++..++.
T Consensus 101 ~~i~l~~g~p~~~~~~~v~e~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 101 DAVSYVRDQLGFDADEFVYELVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 56999999999999988888665543 245965 58999999999843 1 1 2 2489999999999999988
Q ss_pred H-----hcCCCCEEEEcCCCChhHHHHHHHCC--CeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVNG--AAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~G--~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
+ +++|||+|++++|+|+.|...++..| ++++.++. +++|.+|+++++++++ +++|+|+|+|||||||.++
T Consensus 180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~-~~tkai~l~nP~NPTG~v~ 258 (527)
T PRK09275 180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD-PSIKALFLVNPSNPPSVAM 258 (527)
T ss_pred HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC-CCCCEEEEeCCcCCcCCCC
Confidence 6 68999999999999999999888765 55566653 3568999999999886 7899999999999999999
Q ss_pred cHHHHHHHHhC------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 236 NDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 236 ~~~~l~~l~~~------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+.+++++|++. +++||+||+|.+|.+........ ..+++++++||||.||++|||+||++++++
T Consensus 259 s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~-~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 259 SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAV-LPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHh-CCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 99999888642 79999999999987532211111 347999999999999999999999999876
No 89
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=3.9e-35 Score=282.39 Aligned_cols=236 Identities=19% Similarity=0.224 Sum_probs=186.0
Q ss_pred CCeeecCCCC---CCCCCC--HHHHHHHhcC-c--CCCCC-CCcChHHHHHHHHHhc---C---CCCCCE--EEeCCHHH
Q 019868 95 EDIVKIDANE---NPYGPP--PEVREALGQL-K--FPYIY-PDPESRRLRAALAKDS---G---LESDHI--LVGCGADE 157 (334)
Q Consensus 95 ~~~i~l~~~~---~~~~~~--~~v~~al~~~-~--~~~~Y-p~~g~~~lr~~lA~~~---~---~~~~~I--~~t~G~~~ 157 (334)
.++|+|+.|. +++.+| +.+.+++.+. . ....| |..|.++||+++++++ + +++++| ++|+|+++
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~ 105 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTG 105 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccH
Confidence 4679999995 334444 6788887763 2 23468 5569999999999986 2 368887 99999999
Q ss_pred HHHHHHHHh--cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCCcc
Q 019868 158 LIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNNPD 231 (334)
Q Consensus 158 ~i~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPt 231 (334)
++..+++.+ ++|||+|++++|+|+.|...++..|++++.++. .+++++|++.+++.++. .+.+++++++|||||
T Consensus 106 al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPT 185 (396)
T PRK09257 106 ALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPT 185 (396)
T ss_pred HHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCC
Confidence 999998766 489999999999999999999999999999985 35689999999998753 234566668999999
Q ss_pred ccCCcHHHHHHHHhC----CCeEEEccCCcCccCC-CC-ch--hh-hcCCCcEEEEcCCchhhcccccchheeEc---CH
Q 019868 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGL-ES-RM--EW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAF---PL 299 (334)
Q Consensus 232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~-~~-~~--~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l~~---~~ 299 (334)
|.+++.+++++|++. ++++|+||+|.+|.++ +. .. .. ....+++++++||||.|+++|+|+||+++ ++
T Consensus 186 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~ 265 (396)
T PRK09257 186 GADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDA 265 (396)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCH
Confidence 999999999999875 8999999999999864 11 11 11 22357899999999999999999999973 44
Q ss_pred H----HHHHHHHhcC-C-CCCcHHHHHHHHHHhcCch
Q 019868 300 S----IIEYLWRAKQ-P-YNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 300 ~----~i~~l~~~~~-~-~~~~~~~q~aa~~~L~~~~ 330 (334)
+ +++.+.+... . ++++.+.|.++.++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~ 302 (396)
T PRK09257 266 EEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPE 302 (396)
T ss_pred HHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHH
Confidence 4 3344433322 2 4578999999999998864
No 90
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-34 Score=276.72 Aligned_cols=233 Identities=30% Similarity=0.459 Sum_probs=200.4
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcC-c--CCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCC
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQL-K--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDP 169 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~ 169 (334)
+.++|+|+.|++++++++.+.+++.+. . ....|+++ |..+||+++|+++++++++|++|+|+++++..++.+++.+
T Consensus 27 ~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~ 106 (380)
T PRK06225 27 DKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSP 106 (380)
T ss_pred cCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCC
Confidence 356899999999999999999988763 2 23567554 7899999999999999999999999999999999999999
Q ss_pred CCEEEEcCCCChhHHHHHHHCCCeEEEeeCC---CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK---SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (334)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 246 (334)
||+|++++|+|..+...++..|++++.++.+ +++.+|++.+++.++ +++++|++++||||||.+++.+++++|++.
T Consensus 107 gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NptG~~~~~~~~~~i~~~ 185 (380)
T PRK06225 107 GDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMD-ENTRLIYLIDPLNPLGSSYTEEEIKEFAEI 185 (380)
T ss_pred CCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcC-CCceEEEEeCCCCCCCcCCCHHHHHHHHHH
Confidence 9999999999999988889999999999852 257899999999987 679999999999999999998888888764
Q ss_pred ----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC-CCCCcHHHHHH
Q 019868 247 ----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ-PYNVSVAAEVA 321 (334)
Q Consensus 247 ----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~-~~~~~~~~q~a 321 (334)
++++|+||+|.+|..+....... ..+++++++||||.||++|+|+||+++++++++.+..... .++.+.++|.+
T Consensus 186 a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~ 264 (380)
T PRK06225 186 ARDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEA 264 (380)
T ss_pred HHHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHH
Confidence 89999999998876533222211 3478999999999999999999999999999999887653 47889999999
Q ss_pred HHHHhcC
Q 019868 322 ACAALQN 328 (334)
Q Consensus 322 a~~~L~~ 328 (334)
+.++|+.
T Consensus 265 a~~~l~~ 271 (380)
T PRK06225 265 AIAGLKV 271 (380)
T ss_pred HHHHHhc
Confidence 9888865
No 91
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=8.9e-35 Score=280.52 Aligned_cols=235 Identities=23% Similarity=0.346 Sum_probs=195.0
Q ss_pred CCCCeeecCCCCCC----CCCCHHHHHHHhc-Cc--CCCCC-CCcChHHHHHHHHHhcC------CCCCCEEEeCCHHHH
Q 019868 93 KPEDIVKIDANENP----YGPPPEVREALGQ-LK--FPYIY-PDPESRRLRAALAKDSG------LESDHILVGCGADEL 158 (334)
Q Consensus 93 ~~~~~i~l~~~~~~----~~~~~~v~~al~~-~~--~~~~Y-p~~g~~~lr~~lA~~~~------~~~~~I~~t~G~~~~ 158 (334)
++.++++|+.|++. +++++.+.+++.+ +. ....| +..|..++|++++++++ +++++|++|+|++++
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 45789999999874 6788888888875 32 22568 66689999999999986 367899999999999
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
+.+++.+++++||+|++++|+|..|...++..|++++.++. ++++.+|++.+++.+. .+++++++++||||||.+++
T Consensus 109 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~i~~p~NPtG~~~~ 187 (403)
T TIGR01265 109 IEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALAD-EKTVAIVVINPSNPCGSVFS 187 (403)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhC-cCccEEEEecCCCCCCCCCC
Confidence 99999999999999999999999999999999999999875 3467899999999886 57899999999999999999
Q ss_pred HHHHHHHHhC----CCeEEEccCCcCccCCCC---chhhhcCCCcEEEEcCCchhhcccccchheeEcC--HH-----HH
Q 019868 237 DEDLLKILEM----PILVVLDEAYTEFSGLES---RMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--LS-----II 302 (334)
Q Consensus 237 ~~~l~~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~--~~-----~i 302 (334)
.+++++|++. ++++|+||+|.+|.+++. ....+....++++++||||.|+++|+|+||++++ ++ ++
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~ 267 (403)
T TIGR01265 188 RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVL 267 (403)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHH
Confidence 8888887764 999999999999986532 2222333457999999999999999999999983 22 45
Q ss_pred HHHHHhcC-CCCCcHHHHHHHHHHhcC
Q 019868 303 EYLWRAKQ-PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 303 ~~l~~~~~-~~~~~~~~q~aa~~~L~~ 328 (334)
+.+.+... .++++.++|.++.++|++
T Consensus 268 ~~~~~~~~~~~~~~~~~q~~~~~~l~~ 294 (403)
T TIGR01265 268 QGLKNLLQRILGPATIVQGALPDILEN 294 (403)
T ss_pred HHHHHHhhhhcCCChHHHHHHHHHHHh
Confidence 55555543 367899999999999975
No 92
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.8e-34 Score=279.89 Aligned_cols=236 Identities=19% Similarity=0.228 Sum_probs=174.3
Q ss_pred CCCeeecCCCC-CCCCCCH----HHHHHHhcC-c--CCCCC-CCcChHHHHHHHHHhc-CCC-----CCC-----EEEeC
Q 019868 94 PEDIVKIDANE-NPYGPPP----EVREALGQL-K--FPYIY-PDPESRRLRAALAKDS-GLE-----SDH-----ILVGC 153 (334)
Q Consensus 94 ~~~~i~l~~~~-~~~~~~~----~v~~al~~~-~--~~~~Y-p~~g~~~lr~~lA~~~-~~~-----~~~-----I~~t~ 153 (334)
....++|+.+. ++...+| .+.++...+ . ....| |..|.++||+++++++ +.. +++ |+.++
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~ 126 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGT 126 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccch
Confidence 34568888885 3433333 455554332 2 23468 6679999999999987 221 123 33455
Q ss_pred CHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc--CCceEEEEeCCCC
Q 019868 154 GADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER--EKPKCIFLTSPNN 229 (334)
Q Consensus 154 G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~N 229 (334)
|+.+.+..++ .++.|||+|++++|+|+.|...++..|++++.++. .+++++|++.+++.+.+ .+++++++++|||
T Consensus 127 Ga~~l~~~~~-~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~N 205 (423)
T PLN02397 127 GSLRLGAEFL-ARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHN 205 (423)
T ss_pred HHHHHHHHHH-HHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCC
Confidence 5544333333 35579999999999999999999999999999985 34589999988887752 4678888899999
Q ss_pred ccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC---C--chhhh-cCCCcEEEEcCCchhhcccccchheeE--c
Q 019868 230 PDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE---S--RMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGA--F 297 (334)
Q Consensus 230 PtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~---~--~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~--~ 297 (334)
|||.+++.+++++|++. +++||+||+|.+|.+++ . ..... ...+++++++||||+|+++|||+||++ +
T Consensus 206 PTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~ 285 (423)
T PLN02397 206 PTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVC 285 (423)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEe
Confidence 99999999999999874 89999999999998743 1 11122 234679999999999999999999985 4
Q ss_pred -CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhcCch
Q 019868 298 -PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 298 -~~~~i~----~l~~~~~~--~~~~~~~q~aa~~~L~~~~ 330 (334)
++++++ .+.+.... ++++.++|.++..+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~ 325 (423)
T PLN02397 286 KSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPE 325 (423)
T ss_pred CCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHH
Confidence 555544 44444432 4678899999999999864
No 93
>PLN02231 alanine transaminase
Probab=100.00 E-value=3.1e-34 Score=284.24 Aligned_cols=232 Identities=19% Similarity=0.355 Sum_probs=185.7
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCc-----CCCCC-CCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLK-----FPYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIM 163 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~-----~~~~Y-p~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~ 163 (334)
++|+|..+.+.|+. ..+.++...+. ....| +..|.++||+++|+++ | +++++|++|+|+++++..++
T Consensus 130 ~~i~~~~~~~~fp~-~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~ 208 (534)
T PLN02231 130 SLLDKSETHGLFSA-DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMM 208 (534)
T ss_pred ccCCCCCccccCCH-HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHH
Confidence 45666655555554 33333332221 23568 5669999999999987 3 57899999999999999999
Q ss_pred HHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCC
Q 019868 164 RCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 164 ~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~ 235 (334)
+.++ .+||.|+++.|+|+.|...++..|++++.++.+ ++|++|++++++.++. .++|+|+++|||||||.++
T Consensus 209 ~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vl 288 (534)
T PLN02231 209 QLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVL 288 (534)
T ss_pred HHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCC
Confidence 9988 479999999999999999999999999999864 3589999999998863 1689999999999999999
Q ss_pred cHHHHHHHHhC----CCeEEEccCCcCccCC-C-Cc--hhhhc-------CCCcEEEEcCCchhh-cccccchheeEc--
Q 019868 236 NDEDLLKILEM----PILVVLDEAYTEFSGL-E-SR--MEWVK-------KHDNLIVLRTFSKRA-GLAGLRVGYGAF-- 297 (334)
Q Consensus 236 ~~~~l~~l~~~----~~~lIvDeay~~~~~~-~-~~--~~~~~-------~~~~~i~i~S~SK~~-gl~G~R~G~l~~-- 297 (334)
+.+++++|+++ +++||+||+|.++.++ + .. ...+. ...++++++||||.| |++|+|+||+++
T Consensus 289 s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~ 368 (534)
T PLN02231 289 AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTG 368 (534)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEec
Confidence 99999999875 9999999999999873 2 21 11111 123699999999975 899999999986
Q ss_pred -CHHHHHHHHHhcCC-CCCcHHHHHHHHHHhcC
Q 019868 298 -PLSIIEYLWRAKQP-YNVSVAAEVAACAALQN 328 (334)
Q Consensus 298 -~~~~i~~l~~~~~~-~~~~~~~q~aa~~~L~~ 328 (334)
++++++.+.+.... .+.+.+.|.++..++++
T Consensus 369 ~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~ 401 (534)
T PLN02231 369 FTSDVREQIYKVASVNLCSNISGQILASLVMSP 401 (534)
T ss_pred CCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCC
Confidence 68999988877653 46688999999999975
No 94
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=6.1e-34 Score=274.00 Aligned_cols=236 Identities=27% Similarity=0.352 Sum_probs=193.5
Q ss_pred CCCCCeeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCC-cChHHHHHHHHHhc----C--CCCC-CEEEeCCHHHHHH
Q 019868 92 RKPEDIVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD-PESRRLRAALAKDS----G--LESD-HILVGCGADELID 160 (334)
Q Consensus 92 ~~~~~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~-~g~~~lr~~lA~~~----~--~~~~-~I~~t~G~~~~i~ 160 (334)
..+.++++|+.|.++..+++.+.+++.+ . .....|++ .|.++||+++++++ | ++++ +|++|+|+++++.
T Consensus 26 ~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~ 105 (395)
T PRK08175 26 RRGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLA 105 (395)
T ss_pred hcCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHH
Confidence 3456789999998888777777666554 2 23367854 58999999999986 3 4666 8999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHH
Q 019868 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
.++..++++||+|++++|+|+.+...++..|++++.++.+++ ..+.++++++++. .++++|++++||||||.+++.+
T Consensus 106 ~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~ 184 (395)
T PRK08175 106 HLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG-VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELE 184 (395)
T ss_pred HHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC-CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999888899999999986543 3347888887753 3789999999999999999998
Q ss_pred HHHHHHhC----CCeEEEccCCcCccCCCCch---hhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868 239 DLLKILEM----PILVVLDEAYTEFSGLESRM---EWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~~---~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~ 310 (334)
++++|++. ++++|+||+|.++.+++... .... ..+++++++||||.||++|+|+||+++++++++.+.+.+.
T Consensus 185 ~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~ 264 (395)
T PRK08175 185 FFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKS 264 (395)
T ss_pred HHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHh
Confidence 88888764 89999999999988643221 1122 2467899999999999999999999999999999988775
Q ss_pred C--CCCcHHHHHHHHHHhcC
Q 019868 311 P--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 311 ~--~~~~~~~q~aa~~~L~~ 328 (334)
. ++++.+.|.++..+|++
T Consensus 265 ~~~~~~~~~~q~~~~~~l~~ 284 (395)
T PRK08175 265 YHDYGTFTPLQVAAIAALEG 284 (395)
T ss_pred hcccCCCcHHHHHHHHHHhC
Confidence 3 67788899999999975
No 95
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=6.2e-35 Score=277.22 Aligned_cols=235 Identities=34% Similarity=0.554 Sum_probs=202.2
Q ss_pred CeeecCCCCCCCC----CCHHHHHHHhc----CcCCCCCCCc-ChHHHHHHHHHhcC------CCCC-CEEEeCCHHHHH
Q 019868 96 DIVKIDANENPYG----PPPEVREALGQ----LKFPYIYPDP-ESRRLRAALAKDSG------LESD-HILVGCGADELI 159 (334)
Q Consensus 96 ~~i~l~~~~~~~~----~~~~v~~al~~----~~~~~~Yp~~-g~~~lr~~lA~~~~------~~~~-~I~~t~G~~~~i 159 (334)
++|+|+.|+++.. +++++.+++.+ ......|++. |.++||+++|++++ ++++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5899999999887 55666655543 2344788654 79999999999997 7888 999999999999
Q ss_pred HHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhcccC-----CceEEEEeCCCCcc
Q 019868 160 DLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVERE-----KPKCIFLTSPNNPD 231 (334)
Q Consensus 160 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPt 231 (334)
..++..+ .++||+|++++|+|+.|...++..|++++.++. ++++.+|++++++.+++. ++++|++++|||||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999988 789999999999999999999999999999993 467899999999998742 57899999999999
Q ss_pred ccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc----hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 232 GSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR----MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 232 G~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~----~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
|.+++.+++++|++. ++++|+||+|.++.++... ...+....++++++||||.||++|+|+||+++++++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~ 241 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIE 241 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHH
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchhhhhh
Confidence 999999999999654 9999999999999976432 34455666799999999999999999999999999999
Q ss_pred HHHHhcCCCCCcHHHHHHHHHHhcCch
Q 019868 304 YLWRAKQPYNVSVAAEVAACAALQNPI 330 (334)
Q Consensus 304 ~l~~~~~~~~~~~~~q~aa~~~L~~~~ 330 (334)
.+.+....+..+.+.|.++.++|.+..
T Consensus 242 ~l~~~~~~~~~~~~~~~~~~~~l~~~~ 268 (363)
T PF00155_consen 242 RLRRFQRSGLSSSPMQAAAAAALSDPE 268 (363)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHHHH
T ss_pred hhhhccccccccchhhHHHHHhhhccc
Confidence 999988887779999999999998865
No 96
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=6.3e-34 Score=273.12 Aligned_cols=237 Identities=27% Similarity=0.448 Sum_probs=196.1
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc-CCCCCCC-cChHHHHHHHHHhc----CC--CCC-CEEEeCCHHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK-FPYIYPD-PESRRLRAALAKDS----GL--ESD-HILVGCGADELIDLIMR 164 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Yp~-~g~~~lr~~lA~~~----~~--~~~-~I~~t~G~~~~i~~~~~ 164 (334)
.++++|+.|.++.+.++.+.+++.+ +. ....|++ .|..+||+++++++ ++ +++ +|++|+|+++++..++.
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~ 103 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVL 103 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHH
Confidence 3679999999988877777776655 22 2356854 58999999999873 54 455 79999999999999999
Q ss_pred HhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC---CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 165 CVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS---DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 165 ~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~---~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
.++++||+|+++.|+|..|...++..|++++.++.++ +|.+|++++++.+. +++++|++++||||||.+++.++++
T Consensus 104 ~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~l~~p~NPtG~~~~~~~~~ 182 (387)
T PRK07777 104 GLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVT-PRTRALIVNSPHNPTGTVLTAAELA 182 (387)
T ss_pred HhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcC-cccEEEEEcCCCCCCCccCCHHHHH
Confidence 9999999999999999999999999999999988532 46799999999886 5789999999999999999988888
Q ss_pred HHHhC----CCeEEEccCCcCccCCCC---chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--C
Q 019868 242 KILEM----PILVVLDEAYTEFSGLES---RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--P 311 (334)
Q Consensus 242 ~l~~~----~~~lIvDeay~~~~~~~~---~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~ 311 (334)
+|++. ++++|+||+|.++.+.+. ...... ..+++++++||||.||++|+|+||+++++++++.+.+... .
T Consensus 183 ~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~ 262 (387)
T PRK07777 183 AIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT 262 (387)
T ss_pred HHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc
Confidence 88764 899999999999886432 122222 2568999999999999999999999999999998887765 3
Q ss_pred CCCcHHHHHHHHHHhcC-chhh
Q 019868 312 YNVSVAAEVAACAALQN-PIYL 332 (334)
Q Consensus 312 ~~~~~~~q~aa~~~L~~-~~~~ 332 (334)
++.+.+.|.++..+|.+ ..|+
T Consensus 263 ~~~~~~~q~~~~~~l~~~~~~~ 284 (387)
T PRK07777 263 YVGGAPFQPAVAHALDHEDAWV 284 (387)
T ss_pred cCCCCHHHHHHHHHHhCCcHHH
Confidence 66788899998888875 3443
No 97
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-33 Score=270.69 Aligned_cols=234 Identities=29% Similarity=0.491 Sum_probs=194.8
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c----CCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K----FPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLI 162 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~----~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~ 162 (334)
.++++|+.|.+++++++.+.+++.+. . ...+| +..|..++|+++++++ ++++++|++|+|+++++..+
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVA 112 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHH
Confidence 46799999988888888888887652 1 13668 5668999999999987 36789999999999999999
Q ss_pred HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
+..++++||.|++++|+|..|...++..|++++.++.+++ +++|+++++++++ +++++|++++||||||.+++.++++
T Consensus 113 ~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~-~~~~~v~~~~p~NPtG~~~~~~~~~ 191 (394)
T PRK06836 113 LKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAIT-PKTKAVIINSPNNPTGVVYSEETLK 191 (394)
T ss_pred HHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcC-cCceEEEEeCCCCCCCcCCCHHHHH
Confidence 9999999999999999999999999999999999996544 7899999999996 6899999999999999999999998
Q ss_pred HHHhC----------CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHH------
Q 019868 242 KILEM----------PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY------ 304 (334)
Q Consensus 242 ~l~~~----------~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~------ 304 (334)
+|++. ++++|+||+|.++.+++.. .......+++++++||||.||++|+|+||+++++++.+.
T Consensus 192 ~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~ 271 (394)
T PRK06836 192 ALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAA 271 (394)
T ss_pred HHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHH
Confidence 88642 6899999999999865422 222334678999999999999999999999998876432
Q ss_pred HHHhc---CCCCCcHHHHHHHHHHhcCc
Q 019868 305 LWRAK---QPYNVSVAAEVAACAALQNP 329 (334)
Q Consensus 305 l~~~~---~~~~~~~~~q~aa~~~L~~~ 329 (334)
+.... ..++++.+.|.++..++++.
T Consensus 272 ~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 299 (394)
T PRK06836 272 LVFANRILGFVNAPALMQRVVAKCLDAT 299 (394)
T ss_pred HHHHhhccccccCCHHHHHHHHHHhCCh
Confidence 21111 22578899999999999874
No 98
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-34 Score=259.87 Aligned_cols=238 Identities=26% Similarity=0.371 Sum_probs=201.6
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-CcCC-CCCCCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHHh
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LKFP-YIYPDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCV 166 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~-~~Yp~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~l 166 (334)
.|++.|.+.+.+|+.||++++|+++ ++++ ++|| .+..++-+++++|+ .+.++.|++++|...++..+++.|
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~-~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~ 103 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP-YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRAL 103 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHh
Confidence 7899999999999999999999987 5554 7888 45667777777764 578899999999999999999999
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
.++||.|++..|.|+++.......|.+++..|+ +..|.+|+++|++++...++|+++|||||||||.+++.++|++|
T Consensus 104 T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i 183 (388)
T COG1168 104 TKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKI 183 (388)
T ss_pred CcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHH
Confidence 999999999999999999999999999999984 34467899999999987778999999999999999999999998
Q ss_pred HhC----CCeEEEccCCcCccCCC-Cchhh--hc--CCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc---C
Q 019868 244 LEM----PILVVLDEAYTEFSGLE-SRMEW--VK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK---Q 310 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~-~~~~~--~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~---~ 310 (334)
+++ |+.||+||+|+++...+ .+... +. ..++.+++.|.||+|+++|+++++++. ++++.++..+.. .
T Consensus 184 ~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~ 263 (388)
T COG1168 184 AELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNG 263 (388)
T ss_pred HHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhc
Confidence 876 99999999999999755 32222 22 258899999999999999999999987 455544443332 2
Q ss_pred CCCCcHHHHHHHHHHhcC-chhhc
Q 019868 311 PYNVSVAAEVAACAALQN-PIYLE 333 (334)
Q Consensus 311 ~~~~~~~~q~aa~~~L~~-~~~~~ 333 (334)
..++|.++..|..+++++ .+|++
T Consensus 264 ~~~~n~lg~~A~~aAY~~G~~WLd 287 (388)
T COG1168 264 LHGPSALGIIATEAAYNQGEPWLD 287 (388)
T ss_pred CCCCchHHHHHHHHHHHhchHHHH
Confidence 357999999999999998 45554
No 99
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=1.4e-33 Score=276.60 Aligned_cols=202 Identities=20% Similarity=0.277 Sum_probs=159.4
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCcCCCCCC-CcChHHHHHHHH-Hhc----C---CCCC--CEEEeCCHHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLKFPYIYP-DPESRRLRAALA-KDS----G---LESD--HILVGCGADELIDLIMR 164 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp-~~g~~~lr~~lA-~~~----~---~~~~--~I~~t~G~~~~i~~~~~ 164 (334)
++|+|+.|++++++++.+.+....+. +..|| ..|...++++++ +++ + .+++ +|++|+|+++++..++.
T Consensus 95 ~~i~l~~g~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 95 DIISYVIDQLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HHHhhcCCCCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 46999999999997655544444432 23575 346666676666 443 1 2333 89999999999999988
Q ss_pred H-----hcCCCCEEEEcCCCChhHHHHHHHC--CCeEEEeeCC--CC-----CCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868 165 C-----VLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRK--SD-----FSLNVELIADAVEREKPKCIFLTSPNNP 230 (334)
Q Consensus 165 ~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--G~~v~~v~~~--~~-----~~~d~~~l~~~l~~~~~~~i~l~~p~NP 230 (334)
+ +++|||+|++++|+|+.|...+... |++++.++.+ ++ |.+|.++++++++ +++|+|+|+|||||
T Consensus 174 ~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~-~~~kai~l~nP~NP 252 (521)
T TIGR03801 174 SLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD-PSIKALFVVNPSNP 252 (521)
T ss_pred HHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC-CCCcEEEEeCCCCC
Confidence 7 6899999999999999999987775 7788887743 22 8899999998876 68999999999999
Q ss_pred cccCCcHHHHHHHHhC------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 231 DGSIINDEDLLKILEM------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
||.+++.+++++|+++ +++||+||+|.+|.+........ ..+|+++++||||.||++|||+||++++++
T Consensus 253 TG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 253 PSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhh-CCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 9999999999888652 69999999999988532211111 346999999999999999999999999764
No 100
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-33 Score=272.96 Aligned_cols=235 Identities=29% Similarity=0.438 Sum_probs=199.0
Q ss_pred CCeeecCCCCCCCC--CCHHHHHHHhcC----c-C-CCCC-CCcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHH
Q 019868 95 EDIVKIDANENPYG--PPPEVREALGQL----K-F-PYIY-PDPESRRLRAALAKDS----G--LESDHILVGCGADELI 159 (334)
Q Consensus 95 ~~~i~l~~~~~~~~--~~~~v~~al~~~----~-~-~~~Y-p~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i 159 (334)
..+++|+.|.++.. +-..+.+++... . . ...| +..|..+||+++++++ | +++++|++|+|+++++
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CceecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHH
Confidence 56799988875443 223444444331 1 1 3556 4479999999999987 3 5788999999999999
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHH
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDE 238 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~ 238 (334)
+++++.+++|||.|++++|+|......++..|++++.||.+ +.++|++++++.+++.++|++|++ +.+||||.+++.+
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d-~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~ 247 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVD-EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLE 247 (459)
T ss_pred HHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC-CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHH
Confidence 99999999999999999999999999999999999999986 458999999999987789999998 7899999999999
Q ss_pred HHHHHHhC----CCeEEEccCCcCccCCCCc---hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 239 DLLKILEM----PILVVLDEAYTEFSGLESR---MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~---~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
+.++|+++ +++||+||.|++|.+++.+ ....+..+++++++||||.+. ||+|+||+++|+++++.+.+.+..
T Consensus 248 rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~~~k~~ 326 (459)
T COG1167 248 RRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLLRLKQA 326 (459)
T ss_pred HHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcc-cccceeeeeCCHHHHHHHHHHHHH
Confidence 99998876 9999999999999976433 355566799999999999986 999999999999999998877765
Q ss_pred --CCCcHHHHHHHHHHhcCchh
Q 019868 312 --YNVSVAAEVAACAALQNPIY 331 (334)
Q Consensus 312 --~~~~~~~q~aa~~~L~~~~~ 331 (334)
..++.+.|.+....+.++.|
T Consensus 327 ~~~~~s~~~Q~~la~~l~~G~~ 348 (459)
T COG1167 327 ADLGPSSLSQAALAAFLLSGHY 348 (459)
T ss_pred hcCCCChHHHHHHHHHHHcCCH
Confidence 67899999999988886544
No 101
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=2.5e-33 Score=271.47 Aligned_cols=234 Identities=21% Similarity=0.246 Sum_probs=182.1
Q ss_pred CCeeecCCCCCCCCCC--HHHHHHHhc-Cc------CCCCCCCc-ChHHHHHHHHHhc------CCCCCCEEEeCCHHHH
Q 019868 95 EDIVKIDANENPYGPP--PEVREALGQ-LK------FPYIYPDP-ESRRLRAALAKDS------GLESDHILVGCGADEL 158 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~--~~v~~al~~-~~------~~~~Yp~~-g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~ 158 (334)
.++|+|+.|.++..++ +.+.+++.. +. ....|++. |..+||++||+++ ++++++|++|+|++++
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~a 109 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSA 109 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHH
Confidence 4679999998875443 345566554 21 12469654 7999999999987 4788999999999999
Q ss_pred HHHHHHHhcC-----CCCEEEE-cCCCChhHHHHHHHCCC------eEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEe
Q 019868 159 IDLIMRCVLD-----PGDKIVD-CPPTFTMYEFDAAVNGA------AVVKVPRKS-DFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 159 i~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~G~------~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
+.+++.++++ +||.|++ ++|+|+.|...+...|. .++.++.+. ++.+|+++++ +. .++++++++
T Consensus 110 l~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~i~l~ 186 (416)
T PRK09440 110 FFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID-EDTGAICVS 186 (416)
T ss_pred HHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC-CCceEEEEe
Confidence 9999999885 6899999 69999999886654332 222232211 3689999987 33 578999999
Q ss_pred CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 226 SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 226 ~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+||||||.+++.+++++|++. +++||+||+|.++.......... ...+++|+++||||. +++|+|+||++++++
T Consensus 187 ~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 187 RPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCGIVIADEE 265 (416)
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEEEEeCCHH
Confidence 999999999999999998875 89999999998654221111111 125799999999995 999999999999999
Q ss_pred HHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868 301 IIEYLWRAKQP--YNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 301 ~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~ 332 (334)
+++.+.+.... ++++.+.|.++.++|++++|.
T Consensus 266 l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~ 299 (416)
T PRK09440 266 IIEALSNMNGIISLAPGRLGPAIAAEMIESGDLL 299 (416)
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHhccchHH
Confidence 99999887765 467999999999999987764
No 102
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-33 Score=253.53 Aligned_cols=237 Identities=22% Similarity=0.313 Sum_probs=201.0
Q ss_pred CCeeecCCCCCC----CCCCHHHHHHHhc-C--cCCCCC-CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHH
Q 019868 95 EDIVKIDANENP----YGPPPEVREALGQ-L--KFPYIY-PDPESRRLRAALAKDS------GLESDHILVGCGADELID 160 (334)
Q Consensus 95 ~~~i~l~~~~~~----~~~~~~v~~al~~-~--~~~~~Y-p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~ 160 (334)
+.+|.|+.|++. +++.++..+|+.+ + ...++| |..|....|+++|+++ .+++++|++|+|..++|+
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 478999999863 4567777777665 3 234789 8889999999999995 367899999999999999
Q ss_pred HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
.++.+|.+||..|++|.|+|+.|...+...|++++.++ .+.+|.+|++.++..++ ++|.+++++||+||.|.+++.+
T Consensus 141 ~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D-ENT~AivviNP~NPcGnVys~~ 219 (447)
T KOG0259|consen 141 LAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD-ENTVAIVVINPNNPCGNVYSED 219 (447)
T ss_pred HHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc-cCeeEEEEeCCCCCCcccccHH
Confidence 99999999999999999999999999999999999998 46789999999999997 7999999999999999999999
Q ss_pred HHHHHHhC----CCeEEEccCCcCccCCCCch---hhhcCCCcEEEEcCCchhhcccccchheeEcC--------HHHHH
Q 019868 239 DLLKILEM----PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSIIE 303 (334)
Q Consensus 239 ~l~~l~~~----~~~lIvDeay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~--------~~~i~ 303 (334)
-|++|++. +++||.||+|.++.++..+. ..+...-.++.++|+||.|-.||||+||++.. ..+++
T Consensus 220 HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q 299 (447)
T KOG0259|consen 220 HLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQ 299 (447)
T ss_pred HHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHHH
Confidence 99999875 99999999999999865432 22333456899999999999999999999873 33456
Q ss_pred HHHHhcCC-CCCcHHHHHHHHHHhcC--chhh
Q 019868 304 YLWRAKQP-YNVSVAAEVAACAALQN--PIYL 332 (334)
Q Consensus 304 ~l~~~~~~-~~~~~~~q~aa~~~L~~--~~~~ 332 (334)
.+.+..+- ..++++.|.|.-.+|+. ++|+
T Consensus 300 ~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF 331 (447)
T KOG0259|consen 300 GIKNFLDIIPGPATIIQGALPDILEKTPEEFF 331 (447)
T ss_pred HHHHHHhccCCccHhHHHHhHHHHHhChHHHH
Confidence 66666554 57889999999999986 4544
No 103
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=4.7e-33 Score=288.59 Aligned_cols=234 Identities=16% Similarity=0.242 Sum_probs=183.9
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhc-CcCCCC-CCCc-ChHHHHHHHHHhcCCCCC---CEEEeCCHHHHHHHHHHHh
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQ-LKFPYI-YPDP-ESRRLRAALAKDSGLESD---HILVGCGADELIDLIMRCV 166 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~-Yp~~-g~~~lr~~lA~~~~~~~~---~I~~t~G~~~~i~~~~~~l 166 (334)
.+.++|+|+.|+|++++|+.+++++.+ +..... ++.+ ....+++.+++++|++.+ +|++|+|+++++..++.++
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL 774 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC 774 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH
Confidence 456899999999999999999999876 322111 1222 145566666666777554 8999999999999999999
Q ss_pred cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhcccCCceEEEEeCCC-CccccCCcHHHHHHH
Q 019868 167 LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVEREKPKCIFLTSPN-NPDGSIINDEDLLKI 243 (334)
Q Consensus 167 ~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~-NPtG~~~~~~~l~~l 243 (334)
+++||+|+++.|+|+.|...++..|++++.+|.+ ++|.+|++.+++++++.+.++|++++|| ||||.+++.+++++|
T Consensus 775 l~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~L 854 (1082)
T PLN02672 775 VQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEI 854 (1082)
T ss_pred cCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHH
Confidence 9999999999999999999999999999999964 4689999999999864345689999997 999999999999999
Q ss_pred HhC----CCeEEEccCCcCccCCCCc------hhhh---cC---CCcEEEEcCCchhhcccccchheeEcCH-HHHHHHH
Q 019868 244 LEM----PILVVLDEAYTEFSGLESR------MEWV---KK---HDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLW 306 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~~~~~~------~~~~---~~---~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~ 306 (334)
++. +++||+||+|.++.+.+.. .... .. ..++++++||||.|+++|+|+||+++++ ++++.+.
T Consensus 855 lela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~ 934 (1082)
T PLN02672 855 LSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFH 934 (1082)
T ss_pred HHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHH
Confidence 875 8999999999988764321 1111 11 2379999999999999999999999964 5889888
Q ss_pred HhcCCCCC---cHHHHHHHHHHh
Q 019868 307 RAKQPYNV---SVAAEVAACAAL 326 (334)
Q Consensus 307 ~~~~~~~~---~~~~q~aa~~~L 326 (334)
+......+ +..++.++.+++
T Consensus 935 ~~~~~s~~~~~~q~Aaaaalall 957 (1082)
T PLN02672 935 SAPGLSRPHSTLKYTIKKLLGLK 957 (1082)
T ss_pred HhhhhcCCCcHHHHHHHHHHHHH
Confidence 76443333 344444444444
No 104
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=264.55 Aligned_cols=222 Identities=21% Similarity=0.294 Sum_probs=174.6
Q ss_pred HHHHHHHhcC--cCCCCCC-CcChHHHHHHHHHhc-----CCCC---CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868 111 PEVREALGQL--KFPYIYP-DPESRRLRAALAKDS-----GLES---DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (334)
Q Consensus 111 ~~v~~al~~~--~~~~~Yp-~~g~~~lr~~lA~~~-----~~~~---~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~ 179 (334)
+.+.+++.+. .....|+ ..|.++||+++++++ ...+ ++|++|+|+++++.+++..++++||+|++++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~ 102 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHN 102 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 3444555542 2346784 458999999999876 2332 578999999999999999999999999999999
Q ss_pred ChhHHHHHH-HCCCeEEEeeCC-CCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHHHHHHHHh---------
Q 019868 180 FTMYEFDAA-VNGAAVVKVPRK-SDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDLLKILE--------- 245 (334)
Q Consensus 180 y~~~~~~~~-~~G~~v~~v~~~-~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~--------- 245 (334)
|+.|...+. ..|++++.+|.. +++++|++++++.++ ++..+++++++||||||.+++.+++++|++
T Consensus 103 y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~ 182 (388)
T PRK08637 103 WGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAG 182 (388)
T ss_pred CccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999998754 589999999963 557899999998875 234556777899999999999999999876
Q ss_pred CCCeEEEccCCcCccCCCCch----hh-hcCCCcE--EEEcCCchhhcccccchheeEcC------HHHHHHHHHhc---
Q 019868 246 MPILVVLDEAYTEFSGLESRM----EW-VKKHDNL--IVLRTFSKRAGLAGLRVGYGAFP------LSIIEYLWRAK--- 309 (334)
Q Consensus 246 ~~~~lIvDeay~~~~~~~~~~----~~-~~~~~~~--i~i~S~SK~~gl~G~R~G~l~~~------~~~i~~l~~~~--- 309 (334)
.+++||+||+|.+|.+++... .. .+..+++ ++++||||.|+++|+|+||++++ +++++.+.+..
T Consensus 183 ~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~ 262 (388)
T PRK08637 183 TKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGL 262 (388)
T ss_pred CcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHH
Confidence 379999999999998654221 11 2345675 45569999999999999999864 67777775421
Q ss_pred ---CCCCCcHHHHHHHHHHhcCchhh
Q 019868 310 ---QPYNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 310 ---~~~~~~~~~q~aa~~~L~~~~~~ 332 (334)
..+++|.++|.++.++|++++|.
T Consensus 263 ~~~~~~~~s~~~q~a~~~~l~~~~~~ 288 (388)
T PRK08637 263 IRSNISNGPHPSQSAVLRALNSPEFD 288 (388)
T ss_pred hhcccCCCCcHHHHHHHHHhCCHHHH
Confidence 23578999999999999987764
No 105
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-30 Score=235.17 Aligned_cols=241 Identities=23% Similarity=0.326 Sum_probs=195.9
Q ss_pred CCCCeeecCCCCCCCCC--CH-HHHH---H---Hhc----CcCCCCCCCc-ChHHHHHHHHHhc--------CCCCCCEE
Q 019868 93 KPEDIVKIDANENPYGP--PP-EVRE---A---LGQ----LKFPYIYPDP-ESRRLRAALAKDS--------GLESDHIL 150 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~--~~-~v~~---a---l~~----~~~~~~Yp~~-g~~~lr~~lA~~~--------~~~~~~I~ 150 (334)
.+..+|.++..||..-. -. .+.+ + .++ ......|++. |.+.+|+++|+++ ..+|++++
T Consensus 71 Np~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~V 150 (471)
T KOG0256|consen 71 NPLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVV 150 (471)
T ss_pred CchHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHHHHHHHHHHHHHhCCCCccCccceE
Confidence 34557888888876521 11 1111 1 111 1122446654 8999999999987 36899999
Q ss_pred EeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-CCCeEEEee--CCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 151 VGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-NGAAVVKVP--RKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 151 ~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~G~~v~~v~--~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
+++|++.+...++-.|++|||..++|.|.|+.+...++. .|+++++|. ..++|.++.+++|+++.+ .+.|.|
T Consensus 151 v~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGv 230 (471)
T KOG0256|consen 151 VTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGV 230 (471)
T ss_pred EecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEE
Confidence 999999999999999999999999999999999877765 688998887 457799999999998753 468999
Q ss_pred EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch-------hhhc-CCCcEEEEcCCchhhccccc
Q 019868 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM-------EWVK-KHDNLIVLRTFSKRAGLAGL 290 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~-------~~~~-~~~~~i~i~S~SK~~gl~G~ 290 (334)
+|+||+||.|.+++++++..+++. ++.||+||+|+.-.++.+-. .... ..+++.++.|+||.||+||+
T Consensus 231 litNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGf 310 (471)
T KOG0256|consen 231 LITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGF 310 (471)
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCce
Confidence 999999999999999999999986 99999999999877654311 1111 46789999999999999999
Q ss_pred chheeEc-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcCchhhc
Q 019868 291 RVGYGAF-PLSIIEYLWRAKQPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 291 R~G~l~~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
|+|.+.. +++++.+..+......+|+..|..+...|.|.+|.+
T Consensus 311 RvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~ 354 (471)
T KOG0256|consen 311 RVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTR 354 (471)
T ss_pred EEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHH
Confidence 9999988 778999999999888999999999999999976654
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.95 E-value=2.5e-26 Score=215.83 Aligned_cols=231 Identities=36% Similarity=0.561 Sum_probs=190.4
Q ss_pred eecCCCCCCCCCCHHHHHHHhc--C-cCCCCC-CCcChHHHHHHHHHhcCCC------CCCEEEeCCHHHHHHHHHHHhc
Q 019868 98 VKIDANENPYGPPPEVREALGQ--L-KFPYIY-PDPESRRLRAALAKDSGLE------SDHILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~--~-~~~~~Y-p~~g~~~lr~~lA~~~~~~------~~~I~~t~G~~~~i~~~~~~l~ 167 (334)
++|+.|.+++.+++.+++++.. . .....| +..+..++++.++++++.. .+++++++|+++++..++.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC
Confidence 5789999999988887766542 2 233455 5568899999999998644 6789999999999999999999
Q ss_pred CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCH--HHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH--
Q 019868 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV--ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI-- 243 (334)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~--~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l-- 243 (334)
++||+|+++.++|..+...++..|.+++.++.++++..+. +.++.... +++++|++++|+||||.+++.+++++|
T Consensus 81 ~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~ 159 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAE 159 (350)
T ss_pred CCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 9999999999999999999999999999999765555554 56665554 689999999999999999999999854
Q ss_pred -HhC-CCeEEEccCCcCccCCCCch---hhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcCC--CCCc
Q 019868 244 -LEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVS 315 (334)
Q Consensus 244 -~~~-~~~lIvDeay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~~--~~~~ 315 (334)
++. ++++|+|++|+.+...+... ......+++++++|++|.++++|.|+||+++++ ++++.+...... ++.+
T Consensus 160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 239 (350)
T cd00609 160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSGPS 239 (350)
T ss_pred HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhcccCCC
Confidence 444 99999999999877543322 233456789999999999998999999999988 788888777665 6789
Q ss_pred HHHHHHHHHHhcCc
Q 019868 316 VAAEVAACAALQNP 329 (334)
Q Consensus 316 ~~~q~aa~~~L~~~ 329 (334)
...+.++..+|+..
T Consensus 240 ~~~~~~~~~~l~~~ 253 (350)
T cd00609 240 TLSQAAAAAALDDG 253 (350)
T ss_pred hHHHHHHHHHHhCc
Confidence 99999999998875
No 107
>PRK07049 methionine gamma-lyase; Validated
Probab=99.94 E-value=1.5e-25 Score=217.26 Aligned_cols=194 Identities=16% Similarity=0.199 Sum_probs=160.7
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~ 199 (334)
.+|+++....|+++||++.+. +++++++|+++++..++.+++++||.|+++.|.|+.|...+ ...|++++.++.
T Consensus 78 ~R~~~Pt~~~Le~~lA~leg~--~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~ 155 (427)
T PRK07049 78 SRFNHPNSEIVEDRLAVYEGA--ESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD 155 (427)
T ss_pred cCCCCcCHHHHHHHHHHHhCC--CcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence 668888899999999999984 46888888889999999999999999999999999887653 457998887763
Q ss_pred CCCCCCCHHHHHHhcc----cCCceEEEEeCCCCccccCCcHHHHHHHHhC-------CCeEEEccCCcCccCCCCchhh
Q 019868 200 KSDFSLNVELIADAVE----REKPKCIFLTSPNNPDGSIINDEDLLKILEM-------PILVVLDEAYTEFSGLESRMEW 268 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~----~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-------~~~lIvDeay~~~~~~~~~~~~ 268 (334)
..|++.+++.+. ++++|+|++++|+||||.+++.+++.+|++. ++++|+||+|..+.... +.
T Consensus 156 ----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~-pl-- 228 (427)
T PRK07049 156 ----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK-PL-- 228 (427)
T ss_pred ----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCC-cc--
Confidence 246677766553 3578999999999999999999999999975 67899999987544321 11
Q ss_pred hcCCCcEEEEcCCchhhc-ccccchheeEcCHHHHHHHHHhcCCCC--CcHHHHHHHHHHhcC
Q 019868 269 VKKHDNLIVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPYN--VSVAAEVAACAALQN 328 (334)
Q Consensus 269 ~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~~~--~~~~~q~aa~~~L~~ 328 (334)
..++.++++||||.|| ++|+|+||+++++++++.+.+.+..++ ++++.|.++...|+.
T Consensus 229 --~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~t 289 (427)
T PRK07049 229 --EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLET 289 (427)
T ss_pred --ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCh
Confidence 3356799999999998 699999999999999999988777654 889999998888864
No 108
>PRK10534 L-threonine aldolase; Provisional
Probab=99.93 E-value=1.3e-25 Score=211.21 Aligned_cols=222 Identities=18% Similarity=0.185 Sum_probs=166.2
Q ss_pred eeecCCCCCCCCCCHHHHHHHhc-CcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868 97 IVKIDANENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl 174 (334)
.|||++|+++. ++|.+.+++.+ ......| |+++..+|++++|+++|+++. ++++|+++++...+.+++++||+|+
T Consensus 1 ~~~~~~~~~~~-p~~~~~~a~~~~~~~~~~Y~~~~~~~~L~~~la~~~g~~~~--~v~~~g~~a~~~~l~~~~~~gd~vi 77 (333)
T PRK10534 1 MIDLRSDTVTR-PSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAAELSGKEAA--LFLPTGTQANLVALLSHCERGEEYI 77 (333)
T ss_pred CcccccccCCC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCCeE--EEeCchHHHHHHHHHHhcCCCCeeE
Confidence 37999999999 88999999876 3344668 888999999999999998644 5667777777777777889999999
Q ss_pred EcCCCChh-HHHH-HHHCC-CeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868 175 DCPPTFTM-YEFD-AAVNG-AAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (334)
Q Consensus 175 ~~~p~y~~-~~~~-~~~~G-~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 246 (334)
++.|+|.. |... +...| ++++.++.+++|.+|++++++++.+. ++++|++|||+ ||.+++.+++++|++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~ 155 (333)
T PRK10534 78 VGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEF 155 (333)
T ss_pred EechhhhhHhcCCchHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHH
Confidence 99888853 4321 23333 78888876677899999999998632 58999999876 5999999999887653
Q ss_pred ----CCeEEEccCCcCccC--CCCchhhhcCC-CcEEEEcCCchhhcccccchh-eeEcCHHHHHHHHHhcCCC----CC
Q 019868 247 ----PILVVLDEAYTEFSG--LESRMEWVKKH-DNLIVLRTFSKRAGLAGLRVG-YGAFPLSIIEYLWRAKQPY----NV 314 (334)
Q Consensus 247 ----~~~lIvDeay~~~~~--~~~~~~~~~~~-~~~i~i~S~SK~~gl~G~R~G-~l~~~~~~i~~l~~~~~~~----~~ 314 (334)
++++++||+|..+.. .+.....+... ++++ .||||.||++ +| |+++++++++.+.+.+.++ +.
T Consensus 156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~~~~~~i~~~~~~~~~~~~~~~~ 230 (333)
T PRK10534 156 TRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFT--ICLSKGLGTP---VGSLLVGNRDYIKRARRWRKMTGGGMRQ 230 (333)
T ss_pred HHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEE--EEeEcCCCCc---ccceEEcCHHHHHHHHHHHHHhCCchhh
Confidence 899999999873221 12222222222 3333 3899988764 67 6888999999998877653 33
Q ss_pred cHHHHHHHHHHhcC
Q 019868 315 SVAAEVAACAALQN 328 (334)
Q Consensus 315 ~~~~q~aa~~~L~~ 328 (334)
+.++|.++.++|++
T Consensus 231 ~~~~~a~~~~~l~~ 244 (333)
T PRK10534 231 AGILAAAGLYALKH 244 (333)
T ss_pred HHHHHHHHHHHHHh
Confidence 45778888888875
No 109
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=5.9e-25 Score=201.48 Aligned_cols=260 Identities=19% Similarity=0.222 Sum_probs=192.8
Q ss_pred hhCCCCCCCcHHHHHHHhCCCC-CCeeecCCCC--CCCCC---CHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc
Q 019868 73 KLKPYQPILPFEVLSIQLGRKP-EDIVKIDANE--NPYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS 142 (334)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~--~~~~~---~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~ 142 (334)
++..+ +.+++..+...+..++ .+.|||++|. +..+. -+.|++|-+.+ .....| |..|.+++++++++++
T Consensus 4 ~i~~~-p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll 82 (396)
T COG1448 4 KIEAA-PADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL 82 (396)
T ss_pred ccccC-CCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh
Confidence 34444 5667777888887766 4579999983 33333 35566665543 344667 8889999999999986
Q ss_pred -C-----CCCCCE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHH
Q 019868 143 -G-----LESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELI 210 (334)
Q Consensus 143 -~-----~~~~~I--~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l 210 (334)
| +..++| +-|.|+|.++.....-+. .+..+|.+++|+|+++..++...|.++..+| ..++..+|.+.+
T Consensus 83 FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~m 162 (396)
T COG1448 83 FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGM 162 (396)
T ss_pred cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHH
Confidence 5 333444 348899999998877543 5667899999999999999999999999999 334567999999
Q ss_pred HHhcccCCc-eEEEEe-CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-----CchhhhcCCCcEEEEc
Q 019868 211 ADAVEREKP-KCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-----SRMEWVKKHDNLIVLR 279 (334)
Q Consensus 211 ~~~l~~~~~-~~i~l~-~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-----~~~~~~~~~~~~i~i~ 279 (334)
.+.+++-.. .+|+|. -.|||||..++.++|.+|++. +.+.++|-+|++|..+- .....+.....++++.
T Consensus 163 la~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~ 242 (396)
T COG1448 163 LADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVAS 242 (396)
T ss_pred HHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEe
Confidence 988875333 455555 449999999999999999986 89999999999998532 1122233345599999
Q ss_pred CCchhhcccccchheeEc---CHHHHHHH----HHh-cC-CCCCcHHHHHHHHHHhcCchhhc
Q 019868 280 TFSKRAGLAGLRVGYGAF---PLSIIEYL----WRA-KQ-PYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 280 S~SK~~gl~G~R~G~l~~---~~~~i~~l----~~~-~~-~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
||||+||++|.|+|.+.+ +.+..+++ ... +. +.+++..+..++..+|+|++..+
T Consensus 243 S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra 305 (396)
T COG1448 243 SFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRA 305 (396)
T ss_pred hhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHH
Confidence 999999999999998864 44544433 222 22 35788899999999999986643
No 110
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.93 E-value=1e-24 Score=212.85 Aligned_cols=249 Identities=15% Similarity=0.144 Sum_probs=184.0
Q ss_pred hCCCCCCCcHHHHHHHhCCCCCCeeecCCCCC--CCCCCH---HHHHHHhc-Cc-CCCCC-CCcChHHHHHHHHHhcCCC
Q 019868 74 LKPYQPILPFEVLSIQLGRKPEDIVKIDANEN--PYGPPP---EVREALGQ-LK-FPYIY-PDPESRRLRAALAKDSGLE 145 (334)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~--~~~~~~---~v~~al~~-~~-~~~~Y-p~~g~~~lr~~lA~~~~~~ 145 (334)
+.|+ ........++++...+.++++|++|++ ++.++. .+.+++.+ +. ....| +..|..+||++++++++.
T Consensus 16 v~~~-~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~- 93 (460)
T PRK13238 16 VEPI-RLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY- 93 (460)
T ss_pred eccc-cccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC-
Confidence 4444 344566667777777889999999998 787765 45655443 32 23578 677999999999999985
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--------CCCC--CCHHHHHHhcc
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--------SDFS--LNVELIADAVE 215 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--------~~~~--~d~~~l~~~l~ 215 (334)
++|++|+|+++++..++.++++||| |++++|.|..|...+...|++++.++.+ ++|. +|++++++.++
T Consensus 94 -~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~ 171 (460)
T PRK13238 94 -PYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIE 171 (460)
T ss_pred -CcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHh
Confidence 5899999999999999999999999 9999999999999899999999999853 2354 99999999997
Q ss_pred c---CCceEEEEeCCCCccc-cCCcHHHHHHHHhC----CCeEEEccCCcC--ccCCC-----CchhhhcCCCcEEEEcC
Q 019868 216 R---EKPKCIFLTSPNNPDG-SIINDEDLLKILEM----PILVVLDEAYTE--FSGLE-----SRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 216 ~---~~~~~i~l~~p~NPtG-~~~~~~~l~~l~~~----~~~lIvDeay~~--~~~~~-----~~~~~~~~~~~~i~i~S 280 (334)
+ +++++|++++|||||| .+++.+++++|+++ |++||+|+++.. ..+.. .....+. +-+..++|
T Consensus 172 ~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~--~i~~~~~s 249 (460)
T PRK13238 172 EVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIK--EIAREMFS 249 (460)
T ss_pred hcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHH--HHhhhhcc
Confidence 4 3689999999999998 99999877776653 999999997632 21210 0000000 11344578
Q ss_pred Cchhhcccccchh------eeEcC-HHHHHHHHHhc----C--CCCC-cHHHHHHHHHHhcC
Q 019868 281 FSKRAGLAGLRVG------YGAFP-LSIIEYLWRAK----Q--PYNV-SVAAEVAACAALQN 328 (334)
Q Consensus 281 ~SK~~gl~G~R~G------~l~~~-~~~i~~l~~~~----~--~~~~-~~~~q~aa~~~L~~ 328 (334)
++|.+.++|+|+| +++++ +++++.+++.. . .++. +...|.|+..+|++
T Consensus 250 ~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e 311 (460)
T PRK13238 250 YADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYE 311 (460)
T ss_pred cCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHH
Confidence 8888888888864 55566 58888887664 1 1333 44557777766653
No 111
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=1.5e-24 Score=203.94 Aligned_cols=221 Identities=21% Similarity=0.221 Sum_probs=169.0
Q ss_pred CCCCCCCCHHHHHHHhc-CcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868 103 NENPYGPPPEVREALGQ-LKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (334)
Q Consensus 103 ~~~~~~~~~~v~~al~~-~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y 180 (334)
.++++++++.+++++.+ ......| ++....++++.+++++| ++++++++|+++++..++.+++++||+|++++|+|
T Consensus 4 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~ 81 (338)
T cd06502 4 SDTVTGPTPEMLEAMAAANVGDDVYGEDPTTAKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQPGGSVICHETAH 81 (338)
T ss_pred cccCCCCCHHHHHHHHhcccCCcccCCCHHHHHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcc
Confidence 37889999999999876 3222345 66778999999999999 56777888888999999999999999999999998
Q ss_pred hhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868 181 TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (334)
Q Consensus 181 ~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~ 247 (334)
..+.. .+...|++++.++.+. +.+|++++++++++ .++++|++++|||| |.+++.+++++|++. +
T Consensus 82 ~~~~~~~~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~ 159 (338)
T cd06502 82 IYTDEAGAPEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENG 159 (338)
T ss_pred eeeecCCcHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcC
Confidence 75432 3455899999998754 68999999999863 26899999999997 667788887777654 8
Q ss_pred CeEEEccCCcCcc--CCCCchhhhcCCCcEEEEcCCchhhcccccchhe-eEcCHHHHHHHHHhcC----CCCCcHHHHH
Q 019868 248 ILVVLDEAYTEFS--GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQ----PYNVSVAAEV 320 (334)
Q Consensus 248 ~~lIvDeay~~~~--~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~-l~~~~~~i~~l~~~~~----~~~~~~~~q~ 320 (334)
+++|+||+|..+. ..+....... .+..+++.|+||.||++| |+ +++++++++.+..... .++.+.+.+.
T Consensus 160 ~~livDea~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (338)
T cd06502 160 LPLHLDGARLANAAAALGVALKTYK-SGVDSVSFCLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGGGMRQSGFLAA 235 (338)
T ss_pred CeEeechHHHHHHHHhcCCCHHHHH-hcCCEEEEeccccCCCcc---ceEEECCHHHHHHHHHHHHHhCCChhhHHHHHH
Confidence 9999999986543 1111111111 122366889999999887 54 5678899998876653 2456788899
Q ss_pred HHHHHhcCchh
Q 019868 321 AACAALQNPIY 331 (334)
Q Consensus 321 aa~~~L~~~~~ 331 (334)
++..+|++..|
T Consensus 236 a~~~~L~~~~~ 246 (338)
T cd06502 236 AGLAALENDLW 246 (338)
T ss_pred HHHHHhcCchH
Confidence 99999987544
No 112
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.92 E-value=1.4e-23 Score=199.61 Aligned_cols=202 Identities=21% Similarity=0.203 Sum_probs=160.3
Q ss_pred CCCCCCHHHHHHHhcCcCC-------C-CC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868 105 NPYGPPPEVREALGQLKFP-------Y-IY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (334)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~-------~-~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V 173 (334)
.+-+..+++++++.....+ . .. .++...++++++|+++|+ +++++++|+++++..++.+++++||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~~~gd~V 86 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLCEKGDWV 86 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhcCCCCEE
Confidence 3444567777777653211 0 11 123467999999999998 789999999999999999999999999
Q ss_pred EEcCCCChhHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHh
Q 019868 174 VDCPPTFTMYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILE 245 (334)
Q Consensus 174 l~~~p~y~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~ 245 (334)
+++.++|......++..|++++.++.+. +|.+|++++++++++ .++++|++++|+||||...+.+++.++++
T Consensus 87 l~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~ 166 (361)
T cd06452 87 VVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCH 166 (361)
T ss_pred EEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHH
Confidence 9999988766667888999999998653 358999999998852 36899999999999999999999999998
Q ss_pred C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCCC
Q 019868 246 M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYN 313 (334)
Q Consensus 246 ~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~ 313 (334)
. ++++|+|++|........ ....+..++++|++|.++ ++.|+||+++++++++.+.+.+.+|+
T Consensus 167 ~~~~~vivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~l~-~~~~~G~l~~~~~~~~~l~~~~~~~~ 230 (361)
T cd06452 167 EYGVPLLLNGAYTVGRMPVS----GKELGADFIVGSGHKSMA-ASAPIGVLATTEEWADIVFRTSQMFK 230 (361)
T ss_pred HcCCeEEEECCcccCCcCCC----HHHcCCCEEEecCCcccc-CCCCeEEEEECHHHHHHHhccccccc
Confidence 7 999999999984321111 112345799999999997 55699999999999999887765543
No 113
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=3.2e-23 Score=199.18 Aligned_cols=226 Identities=15% Similarity=0.154 Sum_probs=172.3
Q ss_pred CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCCCCC-Cc---Ch----HHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYIYP-DP---ES----RRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~Yp-~~---g~----~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
++.++|+|+.|++ .++++|+++++..+ +. .+.+|+ .. |. .+||+++|++++. +++++++|+++++..
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~--~~~ii~~~~~~a~~~ 113 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGT--EDTILYASCFDANGG 113 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCC--CcEEEECchHHHHHH
Confidence 4578999999985 78888998887665 32 234553 22 43 7899999999996 467888899999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---C--CceEEEEeCCCCccccCCc
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~--~~~~i~l~~p~NPtG~~~~ 236 (334)
++.+++++||.|++++|.|+.+...++..+.+.+.++ ..|++++++.+++ . ++++|++.+++||||.+.+
T Consensus 114 ~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~ 188 (393)
T TIGR01822 114 LFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP 188 (393)
T ss_pred HHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC
Confidence 9999999999999999999999988888888776553 3688999988863 2 6788888899999999999
Q ss_pred HHHHHHHHhC-CCeEEEccCCcCccCCC---Cchhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 237 DEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
.+++.++++. ++++|+||+|....... ......+ ..+.+++++|+||.+ +|+|+||+++++++++.+.+....
T Consensus 189 l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l--~g~r~G~~~~~~~~~~~l~~~~~~ 266 (393)
T TIGR01822 189 LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKAL--GGASGGFTTARKEVVELLRQRSRP 266 (393)
T ss_pred HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHh--hCCCcEEEEeCHHHHHHHHHhCcc
Confidence 9999999987 99999999995322211 1111121 124569999999976 478999999999999988775433
Q ss_pred C----CCcHHHHHHHHHHhc
Q 019868 312 Y----NVSVAAEVAACAALQ 327 (334)
Q Consensus 312 ~----~~~~~~q~aa~~~L~ 327 (334)
+ +.++..+.++.++|+
T Consensus 267 ~~~~~~~~~~~~~a~~~al~ 286 (393)
T TIGR01822 267 YLFSNSLPPAVVGASIKVLE 286 (393)
T ss_pred ceecCCCCHHHHHHHHHHHH
Confidence 2 234454555555553
No 114
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.92 E-value=3.8e-23 Score=199.29 Aligned_cols=203 Identities=21% Similarity=0.214 Sum_probs=161.6
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhc-CcCCCCCCC-----------cChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~~~ 162 (334)
+.+.|+.+... ++|+.+.+++.+ +......+. ...+++|+++|+++|+ ++++|++|+|+++++..+
T Consensus 19 ~~~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~ 97 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLV 97 (401)
T ss_pred ceEEEeCCccc-CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHH
Confidence 46888887665 356778887765 221111111 1256899999999999 789999999999999999
Q ss_pred HHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+.++ +++||+|+++++.|+. +...++..|++++.++.+.++.+|++++++.++ +++++|++++|+||||.+
T Consensus 98 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~i~~~~n~tG~~ 176 (401)
T PRK10874 98 AQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT-PRTRILALGQMSNVTGGC 176 (401)
T ss_pred HHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcC-cCcEEEEEeCCcccccCc
Confidence 9987 3789999999999864 556677789999999977778899999999996 689999999999999999
Q ss_pred CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
++.+++.++++. ++++|+|++|........ +...+..+++.|++|.||.+| +||+++++++++.+.
T Consensus 177 ~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~ 243 (401)
T PRK10874 177 PDLARAITLAHQAGMVVMVDGAQGAVHFPAD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKSELLEAMS 243 (401)
T ss_pred CCHHHHHHHHHHcCCEEEEECCcccccccCC----chhcCCCEEEEecccccCCCc--cEEEEEchHHHhcCC
Confidence 999999999987 999999999964322111 122345688999999888777 699999999888764
No 115
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=7e-23 Score=197.27 Aligned_cols=203 Identities=20% Similarity=0.232 Sum_probs=160.2
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcC-cC--C-CCC-CC-------cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQL-KF--P-YIY-PD-------PESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~-~~--~-~~Y-p~-------~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~ 162 (334)
+.+.|+.+... ++|+.+.+++.+. .. . ..+ +. ...+++|+.+|+++|++ +++|++|+|+++++..+
T Consensus 16 ~~iyld~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~ 94 (398)
T TIGR03392 16 GTVYLDSAATA-LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLV 94 (398)
T ss_pred CeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHH
Confidence 47888877665 3567788877652 11 1 111 11 12457999999999984 78999999999999999
Q ss_pred HHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 163 MRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 163 ~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+.++ +++||+|++++|.|+. +...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.+
T Consensus 95 ~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~~ 173 (398)
T TIGR03392 95 AQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLT-PRTRILALGQMSNVTGGC 173 (398)
T ss_pred HHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEECcccccccc
Confidence 9987 4789999999999864 455667899999999977677899999999997 689999999999999999
Q ss_pred CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
.+.+++.++++. ++++|+|++|........ +...+..+++.|++|.+|.+| +||+++++++++.+.
T Consensus 174 ~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~----~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~ 240 (398)
T TIGR03392 174 PDLARAITLAHQYGAVVVVDGAQGVVHGPPD----VQALDIDFYAFSGHKLYGPTG--IGVLYGKTELLEAMP 240 (398)
T ss_pred CCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC----hhhcCCCEEEEecccccCCCc--eEEEEEcHHHHhhCC
Confidence 999999999987 999999999965432111 112234588889999888666 899999999887663
No 116
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.91 E-value=2.8e-23 Score=196.29 Aligned_cols=207 Identities=15% Similarity=0.157 Sum_probs=157.4
Q ss_pred CCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc---CCCChh
Q 019868 107 YGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC---PPTFTM 182 (334)
Q Consensus 107 ~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~---~p~y~~ 182 (334)
+...|.++++..+ +....+ +..-..+|++++|+++|++++++++++|+++++..++.+++++||+|+++ .|+|..
T Consensus 32 l~~~~~~~~~~~~~~~~~~g-~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vli~~~d~p~~~s 110 (346)
T TIGR03576 32 LAGGFKIDEEDLELLETYVG-PAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPS 110 (346)
T ss_pred CCCChhHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCEEEECCCCCCCchh
Confidence 3445777776554 221011 11236789999999999999999999999999999999999999999975 479999
Q ss_pred HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcC
Q 019868 183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTE 258 (334)
Q Consensus 183 ~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~ 258 (334)
|...++..|++++.+ .|+++++. . +++++|+++ ++||+|.+++.+++++|++. ++++|+||+|..
T Consensus 111 ~~~~~~l~ga~~~~~-------~~l~~l~~-~--~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~ 179 (346)
T TIGR03576 111 IPRSCKLAGAEYFES-------DELSELKK-I--DGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA 179 (346)
T ss_pred HHHHHHHcCCEEecc-------CCHHHHhh-C--cCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 999999999987543 14555432 2 457888885 46999999988888887753 899999999998
Q ss_pred ccCCC-CchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC--CCcHHHHHHHHHHhcC
Q 019868 259 FSGLE-SRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY--NVSVAAEVAACAALQN 328 (334)
Q Consensus 259 ~~~~~-~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~--~~~~~~q~aa~~~L~~ 328 (334)
+.... ...... ..+..+++.|||| +++|+|+||+++++++++.+.+...++ +++++.|+++.++|++
T Consensus 180 ~~~~~~~~~~~~-~~~~divv~s~SK--alaG~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 180 RVRRLYGQPPAL-DLGADLVVTSTDK--LMDGPRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEE 249 (346)
T ss_pred cccccCCCCCHH-HcCCcEEEeccch--hccccceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhh
Confidence 65211 100111 1123477889999 578999999999999999999988774 4688999999999976
No 117
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.91 E-value=5.5e-23 Score=194.56 Aligned_cols=224 Identities=24% Similarity=0.257 Sum_probs=169.7
Q ss_pred CCCCeeecCCCCCCCC--CCHHHHHHHhc-Cc-CCCC-------CCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 93 KPEDIVKIDANENPYG--PPPEVREALGQ-LK-FPYI-------YPD-PESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~--~~~~v~~al~~-~~-~~~~-------Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
.++++|||+.|+ +++ .++++++++.+ +. +... |+. +...+++++++++++. +++|++++|+.+.+
T Consensus 14 ~g~~~id~~~~~-~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~G~~~~~- 90 (360)
T TIGR00858 14 DGRRLLNFSSND-YLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT-EAALLFSSGYLANV- 90 (360)
T ss_pred CCceEEecccCC-cccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CCEEEECchHHHHH-
Confidence 567899999984 444 55888888765 22 1111 121 2256799999999984 57888888876655
Q ss_pred HHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcH
Q 019868 161 LIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~ 237 (334)
.++..++++||+|++++|+|..+...++..|++++.++. +|++.+++.+++ .++++|++.+++||||...+.
T Consensus 91 ~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~ 165 (360)
T TIGR00858 91 GVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPL 165 (360)
T ss_pred HHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCH
Confidence 466778899999999999999999988999999988763 588999988864 246888888999999999999
Q ss_pred HHHHHHHhC-CCeEEEccCCcCccCCCC---chhh--hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 238 EDLLKILEM-PILVVLDEAYTEFSGLES---RMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~---~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
+++.++++. ++++|+||+|..+..... .... +...+++++++||||.||++| ||+++++++++.+.+....
T Consensus 166 ~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~ 242 (360)
T TIGR00858 166 PQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGSQALIDYLINRART 242 (360)
T ss_pred HHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcCHHHHHHHHHhCcc
Confidence 999999987 999999999986543221 1221 123478999999999998777 9999999999888655443
Q ss_pred C----CCcHHHHHHHHHHhc
Q 019868 312 Y----NVSVAAEVAACAALQ 327 (334)
Q Consensus 312 ~----~~~~~~q~aa~~~L~ 327 (334)
+ +.++..+.++.++++
T Consensus 243 ~~~~~~~~~~~~~a~~~al~ 262 (360)
T TIGR00858 243 LIFSTALPPAVAAAALAALE 262 (360)
T ss_pred ceecCCCCHHHHHHHHHHHH
Confidence 2 345565666666665
No 118
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=2.5e-23 Score=198.59 Aligned_cols=191 Identities=19% Similarity=0.158 Sum_probs=155.8
Q ss_pred hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHH
Q 019868 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVE 208 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~ 208 (334)
..++++.+|+++|++ .+++++|+++++..++.+++++||+|+++.+.|......++..|++++.++.. .++.+|++
T Consensus 53 ~~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 130 (370)
T TIGR02539 53 IHDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPE 130 (370)
T ss_pred HHHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHH
Confidence 568899999999986 56678999999999999999999999999888654446778899999999964 35789999
Q ss_pred HHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 209 LIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 209 ~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
++++.+++ +++++|++++|+||||...+.+++.++++. ++++|+||+|..+...... ...+..++++||
T Consensus 131 ~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~----~~~~~di~v~s~ 206 (370)
T TIGR02539 131 GYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSA----KEIGADFIVGSG 206 (370)
T ss_pred HHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCH----HHcCCCEEEeeC
Confidence 99998853 367899999999999999999999999987 9999999999875321111 122345788999
Q ss_pred chhhcccccchheeEcCHHHHHHHHHhcCCCCCcHH----------HHHHHHHHhcC
Q 019868 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVA----------AEVAACAALQN 328 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~~~~~~----------~q~aa~~~L~~ 328 (334)
||.|+ +|.|+||+++++++++.+.+...+|+.+.+ ++.++.++|++
T Consensus 207 sK~~~-~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 262 (370)
T TIGR02539 207 HKSMA-ASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPH 262 (370)
T ss_pred ccccc-CCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHH
Confidence 99998 577899999999999999888776655443 66666666654
No 119
>PLN02242 methionine gamma-lyase
Probab=99.91 E-value=3.7e-23 Score=199.91 Aligned_cols=189 Identities=15% Similarity=0.138 Sum_probs=154.4
Q ss_pred CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH-----HHCCCeEEEeeCC
Q 019868 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA-----AVNGAAVVKVPRK 200 (334)
Q Consensus 126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~G~~v~~v~~~ 200 (334)
|+++...+|++.+|+++|.+ .+++++|+++++..++.+++++||+|+++.|.|+.+...+ +..|++++.++.
T Consensus 73 ~~~Pt~~~LE~~lA~l~g~~--~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~- 149 (418)
T PLN02242 73 HFNPTVLNLGRQMAALEGTE--AAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI- 149 (418)
T ss_pred CCChhHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC-
Confidence 36777899999999999864 6788999999999999999999999999999998776554 347888877753
Q ss_pred CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
.|++++++++++.++++|++++|+||||.+.+.+++.++++. +++||+||+|..+...+ . ..+.+++++
T Consensus 150 ----~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~~~--~----~~g~divv~ 219 (418)
T PLN02242 150 ----TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVLSP--A----RLGADVVVH 219 (418)
T ss_pred ----CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCCCH--H----HcCCcEEEE
Confidence 289999999973359999999999999999999999999987 99999999998765422 1 124569999
Q ss_pred CCchhhcccccc-hheeEcCHHHHHHHHHhcC----CCCCcHHHHHHHHHHhc
Q 019868 280 TFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ----PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 280 S~SK~~gl~G~R-~G~l~~~~~~i~~l~~~~~----~~~~~~~~q~aa~~~L~ 327 (334)
||||.|+.+|+| .||+++++++++.+.+.+. .++.....|.++..++.
T Consensus 220 S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~ 272 (418)
T PLN02242 220 SISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSER 272 (418)
T ss_pred eCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcC
Confidence 999999989988 5999999999998887644 24455556666665554
No 120
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.91 E-value=7.6e-23 Score=197.04 Aligned_cols=192 Identities=16% Similarity=0.169 Sum_probs=157.1
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~ 199 (334)
.+||+++..+|++++|++++. +++++++|+++++..++.+++++||+|+++.|.|+.+.. .++..|++++.++.
T Consensus 59 ~r~~~p~~~~Le~~iA~~~g~--~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 136 (400)
T PRK06234 59 SRLGNPTSTEVENKLALLEGG--EAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDT 136 (400)
T ss_pred cCCCCccHHHHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECC
Confidence 446788999999999999995 367888888899999998899999999999998875443 34668999999874
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i 276 (334)
. |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+||+|..+... ... ..+..+
T Consensus 137 ~-----d~e~l~~~i~-~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~-~~l----~~g~Di 205 (400)
T PRK06234 137 S-----NLEEVRNALK-ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQ-RPL----QLGADV 205 (400)
T ss_pred C-----CHHHHHHHhc-cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcC-Cch----hhCCcE
Confidence 2 7899999997 689999999999999999999999999986 7999999999866542 111 224569
Q ss_pred EEcCCchhhcccccch-heeEcCHHHHHHHHHhc--C--CCCCcHHHHHHHHHHhcC
Q 019868 277 VLRTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAK--Q--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 277 ~i~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~--~--~~~~~~~~q~aa~~~L~~ 328 (334)
+++|+||.++.+|+|+ ||+++++++++.++... . ...++++..+.+...|+.
T Consensus 206 vv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t 262 (400)
T PRK06234 206 VVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT 262 (400)
T ss_pred EEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence 9999999999889876 99999999888876432 1 245777777777777764
No 121
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=6e-22 Score=190.26 Aligned_cols=225 Identities=20% Similarity=0.225 Sum_probs=166.3
Q ss_pred CCCCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CCCCCCC----cCh----HHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-FPYIYPD----PES----RRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~~~Yp~----~g~----~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
++.++|+|..++ +.+++++.+.+++.+ +. ..+.|+. .|. .++++.++++++.+ ++|++|+| ++++..
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~-~~i~~tsG-~~a~~~ 117 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTE-DAILYSSC-FDANGG 117 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCC-cEEEEcCh-HHHHHH
Confidence 567899999887 578888988887765 22 2233321 243 45667777777864 78888888 678888
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---C--CceEEEEeCCCCccccCCc
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---E--KPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~--~~~~i~l~~p~NPtG~~~~ 236 (334)
++.+++++||+|++++|+|+.+...+...|++++.++. .|++++++.+++ . ++++|++.+.+|+||...+
T Consensus 118 ~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~ 192 (397)
T PRK06939 118 LFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP 192 (397)
T ss_pred HHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC
Confidence 88889999999999999999999888889999888763 478888887752 2 6777887778999999999
Q ss_pred HHHHHHHHhC-CCeEEEccCCcC-ccC-CCC-chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 237 DEDLLKILEM-PILVVLDEAYTE-FSG-LES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 237 ~~~l~~l~~~-~~~lIvDeay~~-~~~-~~~-~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
.+++.++++. ++++|+||+|.. +.. .+. ...... ..+.+++++||||.++ |+|+||+++++++++.+.+...+
T Consensus 193 ~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~v~~~~~~~~~l~~~~~~ 270 (397)
T PRK06939 193 LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG--GASGGYTAGRKEVIDWLRQRSRP 270 (397)
T ss_pred HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC--ccCceEEEeCHHHHHHHHHhCcc
Confidence 9999999987 999999999963 221 111 112111 1245799999999884 67999999999999998775443
Q ss_pred C----CCcHHHHHHHHHHh
Q 019868 312 Y----NVSVAAEVAACAAL 326 (334)
Q Consensus 312 ~----~~~~~~q~aa~~~L 326 (334)
+ ..++..+.++.+++
T Consensus 271 ~~~~~~~~~~~~~a~~~al 289 (397)
T PRK06939 271 YLFSNSLAPAIVAASIKVL 289 (397)
T ss_pred ccccCCCCHHHHHHHHHHH
Confidence 2 22344455554544
No 122
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.89 E-value=6.7e-22 Score=190.67 Aligned_cols=205 Identities=20% Similarity=0.209 Sum_probs=161.6
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcC-cCCCCCCC-----------cChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQL-KFPYIYPD-----------PESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-~~~~~Yp~-----------~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~ 160 (334)
+.+++.|+.+... ++|+.+.+++.+. ......|. ...+++|+.++++++++ +++|++|+|+++++.
T Consensus 16 ~~~~~yld~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~ 94 (403)
T TIGR01979 16 GKPLVYLDSAATS-QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESIN 94 (403)
T ss_pred CCceEEEeCcccc-CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHH
Confidence 4567999888766 4567778887542 11111111 13568999999999998 689999999999999
Q ss_pred HHHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868 161 LIMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (334)
Q Consensus 161 ~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG 232 (334)
.++.++ +++||+|+++++.|+. +...++..|++++.++.++++.+|++++++.++ +++++|++++|+||||
T Consensus 95 ~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~-~~~~lv~~~~~~~~tG 173 (403)
T TIGR01979 95 LVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLT-EKTKLVAITHVSNVLG 173 (403)
T ss_pred HHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhc-cCCeEEEEEccccccc
Confidence 998875 5789999999998764 345566789999999977778899999999997 6899999999999999
Q ss_pred cCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
.+++.+++.++++. ++++|+|++|+..... . .+...+.++++.|++|.+|.+| +||+++++++++.+.
T Consensus 174 ~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~---~-~~~~~~~d~~~~s~~K~~gp~G--~g~l~~~~~~~~~~~ 242 (403)
T TIGR01979 174 TVNPVEEIAKLAHQVGAKVLVDGAQAVPHMP---V-DVQALDCDFYVFSGHKMYGPTG--IGVLYGKEELLEQMP 242 (403)
T ss_pred ccCCHHHHHHHHHHcCCEEEEEchhhcCccc---c-CccccCCCEEEEecccccCCCC--ceEEEEchHHHhcCC
Confidence 99999999999987 9999999999753211 1 1223356799999999888666 899999988877653
No 123
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=3.3e-22 Score=191.42 Aligned_cols=211 Identities=16% Similarity=0.128 Sum_probs=160.7
Q ss_pred eecCCCCCCCCCCHHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcC
Q 019868 98 VKIDANENPYGPPPEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCP 177 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~ 177 (334)
|.++.+.++.+..+. .... ..+|+++...+|++++|++.+ .+++++++|+++++..++.+++++||+|+++.
T Consensus 26 i~~ss~~~~~~~~~~-----~~~~-Y~R~~~p~~~~le~~lA~l~g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~ 97 (382)
T TIGR02080 26 IYLSTTYNFTGFNEP-----RAYD-YSRSGNPTRDLLQQALAELEG--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPH 97 (382)
T ss_pred eeCCceeEeCCcCcc-----CCCc-ccCCCCchHHHHHHHHHHHhC--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcC
Confidence 667776655432211 1111 256788889999999999998 46899999999999999999999999999999
Q ss_pred CCChhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEE
Q 019868 178 PTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (334)
Q Consensus 178 p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIv 252 (334)
|+|+.+...+ ...|.++..++ ..|++.++++++ +++|+|++++|+||||.+++.+++.++++. ++++|+
T Consensus 98 p~y~~~~~~~~~~~~~~~~~v~~~d-----~~d~~~l~~ai~-~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 98 DCYGGTYRLLNALAKKGCFRVLFVD-----QGDEQALRAALA-QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred CCcHHHHHHHHHHHhhcCeEEEEEC-----CCCHHHHHHhcC-cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 9998543322 22355665553 237899999997 679999999999999999999999999987 999999
Q ss_pred ccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
|++|..+.... .... +..++++|+||.++ .+|++.|++++ ++++++.+...+.. .+++++.++.+...|+
T Consensus 172 D~a~~~~~~~~-pl~~----gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 172 DNTFLSPALQN-PLAL----GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred ECCCcccccCC-chhh----CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHcccc
Confidence 99998654322 1111 23489999999874 57889999877 67888888766554 4577777777665554
No 124
>PRK06460 hypothetical protein; Provisional
Probab=99.89 E-value=2.5e-22 Score=191.92 Aligned_cols=175 Identities=14% Similarity=0.175 Sum_probs=137.0
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC----hhHHHHHHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~G~~v~~v~~~~~ 202 (334)
.++...+|++++|+++|.+. .+++++| ++++..++.+++++||+|+++.|.| ..|...++..|+++..++.+
T Consensus 43 ~~p~~~~L~~~lA~l~g~~~-~v~~~sG-~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~-- 118 (376)
T PRK06460 43 ANPTVLELTKKIVELENAEM-GVAFSSG-MGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG-- 118 (376)
T ss_pred CCccHHHHHHHHHHHhCCCc-EEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC--
Confidence 56778999999999999854 4655555 6899999999999999999997655 45566777899999888753
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
+.+.+++.++ +++|+|++++||||||.+++.+++.++++. ++++|+||+|..+... . .. ..+++++++|+
T Consensus 119 ---~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~-~--~l--~~~~divv~S~ 189 (376)
T PRK06460 119 ---SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQ-K--PL--ELGADIVVHSA 189 (376)
T ss_pred ---CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccC-C--hh--hcCCCEEEeec
Confidence 2234444444 689999999999999999999999999987 9999999999754321 1 11 23457999999
Q ss_pred chhhc-ccccchheeEcCHHHHHHHHHhcCCCCC
Q 019868 282 SKRAG-LAGLRVGYGAFPLSIIEYLWRAKQPYNV 314 (334)
Q Consensus 282 SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~~~~ 314 (334)
||.|+ ..|.|+||+++++++++.+.+.+..++.
T Consensus 190 sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g~ 223 (376)
T PRK06460 190 SKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLGT 223 (376)
T ss_pred ceeccCCCCceEEEEecCHHHHHHHHHHHHhcCC
Confidence 99875 2236799999999999999877766554
No 125
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.89 E-value=7.6e-22 Score=190.64 Aligned_cols=202 Identities=17% Similarity=0.200 Sum_probs=158.4
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhc-CcCC--C----CCC-C----cChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQ-LKFP--Y----IYP-D----PESRRLRAALAKDSGL-ESDHILVGCGADELIDLI 162 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~~~~--~----~Yp-~----~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~~~ 162 (334)
+++.|+.+... ++|+.+.+++.+ +... + .|. . ...+++|+++|++++. ++++|++|+|+++++..+
T Consensus 23 ~~iYld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~ 101 (406)
T PRK09295 23 PLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLV 101 (406)
T ss_pred ceEEEeCcccc-cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHH
Confidence 57888877654 356778887754 2111 1 111 0 1145899999999997 678999999999999999
Q ss_pred HHH----hcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 163 MRC----VLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 163 ~~~----l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+.+ ++++||+|+++++.|++ |...++..|++++.++.+.++.+|+++++++++ +++++|++++|+||||.+
T Consensus 102 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~l~~~~n~tG~~ 180 (406)
T PRK09295 102 ANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFD-ERTRLLAITHVSNVLGTE 180 (406)
T ss_pred HHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcC-CCcEEEEEecchhccccc
Confidence 886 45899999999988753 455667789999999977777899999999997 689999999999999999
Q ss_pred CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l 305 (334)
++.+++.++++. ++++++|++|...... . .+...+..+++.|++|.+|.+| +||+++++++++.+
T Consensus 181 ~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~~~~ 246 (406)
T PRK09295 181 NPLAEMIALAHQHGAKVLVDGAQAVMHHP---V-DVQALDCDFYVFSGHKLYGPTG--IGILYVKEALLQEM 246 (406)
T ss_pred CCHHHHHHHHHHcCCEEEEEcccccCccc---c-CchhcCCCEEEeehhhccCCCC--cEEEEEchHhHhhC
Confidence 999999999987 9999999999754321 1 1123345699999999888666 79999999887654
No 126
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=2.7e-22 Score=192.04 Aligned_cols=223 Identities=17% Similarity=0.134 Sum_probs=166.1
Q ss_pred eecCCCCCCCCCCHHHHHHHhc-Cc-C----CCCCCC-----cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868 98 VKIDANENPYGPPPEVREALGQ-LK-F----PYIYPD-----PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~-~----~~~Yp~-----~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l 166 (334)
+.|+.+... ++|+.+++++.+ .. . ...|.. .-..++|+.+|+++|+++++|++++|+++++..++..+
T Consensus 2 ~yld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~ 80 (381)
T PRK02948 2 IYLDYAATT-PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSL 80 (381)
T ss_pred EeccCCCCC-CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHH
Confidence 455555443 356778887754 21 1 011110 11458899999999999999999999999999988877
Q ss_pred c----CCCCEEEEcCCCChhHH---HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 167 L----DPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 167 ~----~~gd~Vl~~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
+ ++||+|+++...|+.+. ..++..|++++.++.++++.+|++++++.++ +++++|++++|+||||.+++.++
T Consensus 81 ~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~ 159 (381)
T PRK02948 81 LNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAIT-PDTVLASIQHANSEIGTIQPIAE 159 (381)
T ss_pred HHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCCCCCCHHHHHHhcC-CCCEEEEEECCcCCcEeehhHHH
Confidence 5 57899999997776544 3456689999999976777899999999986 67899999999999999999999
Q ss_pred HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH-HHHHHH------hcCC
Q 019868 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI-IEYLWR------AKQP 311 (334)
Q Consensus 240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~-i~~l~~------~~~~ 311 (334)
+.++++. ++++|+|+++. +...+- .+...+.++++.|++|.||.+| +|++++++++ +..+.. ...+
T Consensus 160 I~~l~~~~~~~vivD~~~~-~g~~~~---~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~ 233 (381)
T PRK02948 160 IGALLKKYNVLFHSDCVQT-FGKLPI---DVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTTHEKGFRP 233 (381)
T ss_pred HHHHHHHcCCEEEEEChhh-cccccc---CcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCcccCCCCCCCcCC
Confidence 9999987 99999996543 332111 1234467799999999999888 7999887664 111110 0134
Q ss_pred CCCcHHHHHHHHHHhcC
Q 019868 312 YNVSVAAEVAACAALQN 328 (334)
Q Consensus 312 ~~~~~~~q~aa~~~L~~ 328 (334)
++++.+++.++.++|++
T Consensus 234 ~t~~~~~~~a~~~al~~ 250 (381)
T PRK02948 234 GTVNVPGIAAFLTAAEN 250 (381)
T ss_pred CCccHHHHHHHHHHHHH
Confidence 67899999999988875
No 127
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.89 E-value=2.9e-22 Score=191.51 Aligned_cols=228 Identities=19% Similarity=0.248 Sum_probs=166.1
Q ss_pred CCCCeeecCCC--CCCCCCC-HHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 93 KPEDIVKIDAN--ENPYGPP-PEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 93 ~~~~~i~l~~~--~~~~~~~-~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
++..+|||..| .++++.. |.+.+++.+ +.. ...|+.+...+|+++++++++.+ ++++++|+++++..+++
T Consensus 25 ~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~ 102 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSGAD--RVFFCNSGAEANEAALK 102 (379)
T ss_pred CCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHH
Confidence 46678999886 5566654 788877764 321 24566666789999999999864 99999999999999888
Q ss_pred Hhc---C----CCCEEEEcCCCChhHHHHHHHCCCeEEE----eeCCCCCCC----CHHHHHHhcccCCceEEEEeCCCC
Q 019868 165 CVL---D----PGDKIVDCPPTFTMYEFDAAVNGAAVVK----VPRKSDFSL----NVELIADAVEREKPKCIFLTSPNN 229 (334)
Q Consensus 165 ~l~---~----~gd~Vl~~~p~y~~~~~~~~~~G~~v~~----v~~~~~~~~----d~~~l~~~l~~~~~~~i~l~~p~N 229 (334)
.+. . +||+|++++|+|..+...+...+..... .+...++.. |++.+++.++ .++++|+++.++|
T Consensus 103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~v~~~p~~~ 181 (379)
T TIGR00707 103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAID-DETAAVIVEPIQG 181 (379)
T ss_pred HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhh-hCeeEEEEEcccc
Confidence 542 2 3799999999998877766655544321 122122222 8999999986 5789999976677
Q ss_pred ccccC-CcHHHHHHHHh---C-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 230 PDGSI-INDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 230 PtG~~-~~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
|+|.. ++.+++++|.+ . ++++|+||+|.+|.+.+... ......++++ +|||.++ +|+|+||++++++++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~---t~sK~~~-~G~riG~~~~~~~~~ 257 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII---TLAKGLG-GGVPIGATLAKEEVA 257 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE---EEccccc-CCcccEEEEEcHHHH
Confidence 77764 57666666654 3 89999999999876533221 1222233333 6899999 999999999999999
Q ss_pred HHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868 303 EYLWRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 303 ~~l~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
+.+.... ..++.++++|.++.++|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~ 284 (379)
T TIGR00707 258 EAFTPGDHGSTFGGNPLACAAALAVLE 284 (379)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9887643 347789999999998886
No 128
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.89 E-value=1.4e-21 Score=185.34 Aligned_cols=198 Identities=19% Similarity=0.177 Sum_probs=157.3
Q ss_pred CCCCCCHHHHHHHhcCcCCCCCCCcC--hHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868 105 NPYGPPPEVREALGQLKFPYIYPDPE--SRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (334)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~Yp~~g--~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~ 181 (334)
.+.+.++.+.+++.+....++|+... ..++++.+++++|++++ .+++++|+++++..++.+++++||+|+++.++|.
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~ 85 (356)
T cd06451 6 GPSNVPPRVLKAMNRPMLGHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVF 85 (356)
T ss_pred CCcCCCHHHHHHhCCCccCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCch
Confidence 35567789999987632335566543 67899999999999554 5778888899999999999999999999988776
Q ss_pred h--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcC
Q 019868 182 M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTE 258 (334)
Q Consensus 182 ~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~ 258 (334)
. +...++..|++++.++.++++.+|++++++.+++.++++|++++|+||||.+.+.+++.++++. ++++++|++|..
T Consensus 86 ~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~ 165 (356)
T cd06451 86 GDRWADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSL 165 (356)
T ss_pred hHHHHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhc
Confidence 4 5667788999999999766678999999999974489999999999999999999999999987 999999998763
Q ss_pred ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (334)
Q Consensus 259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~ 307 (334)
.. ..... ...+..+++.|.+|.++.+ .++||++++++.++.+.+
T Consensus 166 g~---~~~~~-~~~~~d~~~~s~~K~l~~p-~g~G~l~~~~~~~~~~~~ 209 (356)
T cd06451 166 GG---EPFRM-DEWGVDVAYTGSQKALGAP-PGLGPIAFSERALERIKK 209 (356)
T ss_pred cC---ccccc-cccCccEEEecCchhccCC-CCcceeEECHHHHHHHHh
Confidence 21 11111 1223347788999998743 468999999998887764
No 129
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=8.2e-22 Score=188.84 Aligned_cols=192 Identities=17% Similarity=0.160 Sum_probs=154.3
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHHHH---HHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFDA---AVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~---~~~G~~v~~v~~ 199 (334)
.+||++....|++++|++.+. +++++++|+++++..++.+++++||+|++++|+|+. |.... ...|.++..++
T Consensus 47 ~R~~~pt~~~L~~~lA~l~g~--~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd- 123 (386)
T PRK08045 47 SRRGNPTRDVVQRALAELEGG--AGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD- 123 (386)
T ss_pred eCCCCccHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC-
Confidence 567888899999999999984 479999999999999999999999999999999985 43322 22445666653
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
..|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+||+|...... .+.. ....+++
T Consensus 124 ----~~d~e~l~~~l~-~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~-~pl~----~gaDivv 193 (386)
T PRK08045 124 ----QGDEQALRAALA-EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQ-NPLA----LGADLVL 193 (386)
T ss_pred ----CCCHHHHHHhcc-cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Cchh----hCCCEEE
Confidence 358999999997 689999999999999999999999999987 9999999999865432 1222 1224999
Q ss_pred cCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|++|.++ ..|.+.|++++ ++++++.+...+.. .+++++.++.+...|+.
T Consensus 194 ~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t 247 (386)
T PRK08045 194 HSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRT 247 (386)
T ss_pred eecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc
Confidence 99999874 56678999987 57888877655544 45788999988888875
No 130
>PLN02721 threonine aldolase
Probab=99.89 E-value=4.7e-22 Score=188.04 Aligned_cols=209 Identities=21% Similarity=0.183 Sum_probs=150.5
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC--cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCC
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL--KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGD 171 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~--~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~-~gd 171 (334)
..+++|+.|++++ +++.+++++... .....|+++...+||+++|++++.+. .+++++| ++++..++..+++ +||
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~~~~G-s~a~~~~l~~~~~~~gd 81 (353)
T PLN02721 5 SRVVDLRSDTVTK-PTDAMRAAMANAEVDDDVLGYDPTALRLEEEMAKIFGKEA-ALFVPSG-TMGNLISVLVHCDVRGS 81 (353)
T ss_pred hhhhhhhcccccC-CCHHHHHHHHhccCCCcccCCCHHHHHHHHHHHHHhCCce-eEEecCc-cHHHHHHHHHHccCCCC
Confidence 3478999999997 678888888753 33334555558899999999999753 3444445 5555567776777 999
Q ss_pred EEEEcCCCChh-HHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CCceEEEEeC-CCCccccCCcHHHHH
Q 019868 172 KIVDCPPTFTM-YEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKPKCIFLTS-PNNPDGSIINDEDLL 241 (334)
Q Consensus 172 ~Vl~~~p~y~~-~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~~i~l~~-p~NPtG~~~~~~~l~ 241 (334)
+|++++|+|.. |.. .+...|++++.++.++++.+|++++++.+++ +++++|++++ +|||||.+++.++++
T Consensus 82 ~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~ 161 (353)
T PLN02721 82 EVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTD 161 (353)
T ss_pred eEEEcCccceehhcccchhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHH
Confidence 99999999853 432 5667899999998777788999999999863 3789999986 588999999987666
Q ss_pred HHHh---C-CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchhe-eEcCHHHHHHHHHhcCC
Q 019868 242 KILE---M-PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY-GAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 242 ~l~~---~-~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~-l~~~~~~i~~l~~~~~~ 311 (334)
+|++ . |+++|+||+|..... ...........+ .++.|+||.|+. ++|| +++++++++.+...+..
T Consensus 162 ~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d--~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~~~ 234 (353)
T PLN02721 162 KVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAAD--SVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLRKT 234 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCC--EEEEecccccCC---ceeeEEecCHHHHHhHHHHHHh
Confidence 6654 4 899999999863221 111111222233 445579998863 3565 66789999887766554
No 131
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=1.3e-21 Score=190.09 Aligned_cols=204 Identities=21% Similarity=0.233 Sum_probs=158.9
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-Cc-C---CCC---CCCc----ChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LK-F---PYI---YPDP----ESRRLRAALAKDSGLE-SDHILVGCGADELIDL 161 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~-~---~~~---Yp~~----g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~ 161 (334)
.+++.|+.+... ++|+.+.+++.+ +. . ... |... ...++|+++|++++++ +++|++|+|+++++..
T Consensus 31 ~~~iyLd~a~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~ 109 (424)
T PLN02855 31 SKLVYLDNAATS-QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINL 109 (424)
T ss_pred CCeEEeeCcccc-CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHH
Confidence 457999886654 566778888755 21 1 111 2111 2468999999999985 5799999999999999
Q ss_pred HHHHh----cCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 162 IMRCV----LDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 162 ~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
++..+ +++||+|+++.+.|+. |...++..|++++.++.+.++.+|++++++.++ +++++|++++|+||||.
T Consensus 110 i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~~i~-~~t~lv~i~~~~n~tG~ 188 (424)
T PLN02855 110 VAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKELLS-EKTKLVATHHVSNVLGS 188 (424)
T ss_pred HHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHHHhc-cCceEEEEeCccccccc
Confidence 98863 5899999999998863 455667789999999876666799999999997 58999999999999999
Q ss_pred CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
+++.+++.++++. ++++|+|++|.... .... +...+..+++.|++|.+|.+| +||+++++++++.+.
T Consensus 189 ~~~~~~I~~l~~~~g~~vivD~a~~~g~---~~~~-~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~ 256 (424)
T PLN02855 189 ILPVEDIVHWAHAVGAKVLVDACQSVPH---MPVD-VQTLGADFLVASSHKMCGPTG--IGFLWGKSDLLESMP 256 (424)
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhhcCC---cCCC-chhcCCCEEEeecccccCCCc--cEEEEEchhhhhcCC
Confidence 9999999999987 99999999996321 1111 223345688999999777555 899999998877653
No 132
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.89 E-value=3.3e-21 Score=184.24 Aligned_cols=225 Identities=19% Similarity=0.179 Sum_probs=165.8
Q ss_pred CCCCeeecCCCCC-CCCCCHHHHHHHhc-CcC-CC---CC-----CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LKF-PY---IY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~~-~~---~Y-----p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
.++++|||..|++ .+.++|++++++.+ +.. .. .| +..-..+++++++++++. ++.|++++|+ +++..
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~-~~~i~~~~g~-~~~~~ 114 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA-ERALLFSSGY-AANLA 114 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHH
Confidence 5678999999875 35567889888765 221 11 11 122357899999999984 4556655555 55556
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC--CceEEEEeCCCCccccCCcHHH
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
++..++++||+|++++|+|+.+...++..|++++.++. .|++.+++.++.. ++.++++.+++||||...+.++
T Consensus 115 ~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-----~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~ 189 (385)
T PRK05958 115 VLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-----NDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAE 189 (385)
T ss_pred HHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-----CCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHH
Confidence 77778999999999999999999888889999988864 3788999888642 3455665688999999999999
Q ss_pred HHHHHhC-CCeEEEccCCcCccCC--CC-chh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868 240 LLKILEM-PILVVLDEAYTEFSGL--ES-RME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (334)
Q Consensus 240 l~~l~~~-~~~lIvDeay~~~~~~--~~-~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~- 312 (334)
+.++++. ++++|+||+|..+... +. ... .+...++++++.||||.||++| ||+++++++++.+.+....+
T Consensus 190 i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~~~~~~ 266 (385)
T PRK05958 190 LVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSETLIDYLINRARPFI 266 (385)
T ss_pred HHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCHHHHHHHHHhCccce
Confidence 9999997 9999999999764322 11 111 1234567899999999998777 99999999988876554332
Q ss_pred ---CCcHHHHHHHHHHhc
Q 019868 313 ---NVSVAAEVAACAALQ 327 (334)
Q Consensus 313 ---~~~~~~q~aa~~~L~ 327 (334)
..++..+.++.++|+
T Consensus 267 ~~~~~~~~~~aa~~aal~ 284 (385)
T PRK05958 267 FTTALPPAQAAAARAALR 284 (385)
T ss_pred ecCCCCHHHHHHHHHHHH
Confidence 345666666666665
No 133
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=2.3e-21 Score=186.14 Aligned_cols=209 Identities=21% Similarity=0.204 Sum_probs=165.7
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcCcC--C------CCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQLKF--P------YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~~~--~------~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++|+|+--.---++++.+++++.+... . +.+. .+...++|+.+|+++|++ ++++++|+++++..+
T Consensus 17 ~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~a 94 (387)
T PRK09331 17 EEEFINLDPIQRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD--EARVTHGAREGKFAV 94 (387)
T ss_pred cccccccChhhcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHH
Confidence 35577776544444567888888876311 1 1111 224689999999999974 688899999999999
Q ss_pred HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC--CCCCCCCHHHHHHhccc------CCceEEEEeCCCCccccC
Q 019868 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR--KSDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~--~~~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~ 234 (334)
+.+++++||+|+++.++|......++..|++++.++. ++++.+|++++++.+++ +++++|++++|+|+||..
T Consensus 95 l~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~ 174 (387)
T PRK09331 95 MHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNL 174 (387)
T ss_pred HHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccc
Confidence 9999999999999999988776678889999999997 56788999999998863 268999999999999999
Q ss_pred CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
.+.+++.++++. ++++|+|++|+........ ...+..+++.|++|.++ .+.|+||+++++++++.+.+..
T Consensus 175 ~~l~~I~~la~~~g~~livD~a~~~g~~~~~~----~~~g~D~~~~s~~K~l~-~~~~~G~l~~~~~~i~~~~~~~ 245 (387)
T PRK09331 175 ADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDG----KKLGADFIVGSGHKSMA-ASAPSGVLATTEEYADKVFRTS 245 (387)
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccCCcCCCH----HHcCCCEEEeeCccccc-CCCCEEEEEECHHHHhhccccc
Confidence 999999999987 9999999999843211111 12345689999999987 5569999999999998876653
No 134
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.88 E-value=7.5e-22 Score=182.81 Aligned_cols=203 Identities=17% Similarity=0.230 Sum_probs=166.4
Q ss_pred CCC-CCcChHHHHHHHHHhcC------CCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEE
Q 019868 124 YIY-PDPESRRLRAALAKDSG------LESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (334)
Q Consensus 124 ~~Y-p~~g~~~lr~~lA~~~~------~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~ 195 (334)
.+| +..|.++|+..+.++.+ ...+ +|++|+|.+.++..+++.++++||.|++...+|+.-....+..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 567 56799999999999875 1122 899999999999999999999999999999999988888888999999
Q ss_pred EeeCCCCCCCCHHHHHHhccc--------CCceEEEEe-CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCC
Q 019868 196 KVPRKSDFSLNVELIADAVER--------EKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGL 262 (334)
Q Consensus 196 ~v~~~~~~~~d~~~l~~~l~~--------~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~ 262 (334)
+|++++ .++++|.+++.+.+ ++++++|.. +-+||||..++.+..++|.++ +++||+||.|.-+.+.
T Consensus 174 pv~md~-~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~ 252 (472)
T KOG0634|consen 174 PVKMDQ-DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMN 252 (472)
T ss_pred eccccC-CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecc
Confidence 999854 48999999998753 346677755 669999999999998887664 9999999999876543
Q ss_pred C--------C-c------h-------hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHH
Q 019868 263 E--------S-R------M-------EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAA 318 (334)
Q Consensus 263 ~--------~-~------~-------~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~ 318 (334)
. . . . -..+-.+|+|-..||||.++ ||+|+||+.+++-+++++.+.... .+++.+.
T Consensus 253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~s 331 (472)
T KOG0634|consen 253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFS 331 (472)
T ss_pred ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeecCHHHHHHHhhhcceeecCccccc
Confidence 1 0 0 0 01234689999999999987 999999999999999988877665 4578888
Q ss_pred HHHHHHHhcC
Q 019868 319 EVAACAALQN 328 (334)
Q Consensus 319 q~aa~~~L~~ 328 (334)
|.+..+.|+.
T Consensus 332 q~iv~a~l~~ 341 (472)
T KOG0634|consen 332 QGIVYAMLKR 341 (472)
T ss_pred HHHHHHHHHH
Confidence 8888888775
No 135
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.88 E-value=4.3e-21 Score=183.83 Aligned_cols=225 Identities=18% Similarity=0.209 Sum_probs=165.6
Q ss_pred CCCCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CC---CCC-CCcChHHHHHH----HHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-FP---YIY-PDPESRRLRAA----LAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~---~~Y-p~~g~~~lr~~----lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
++++++||+.++ ..++++|.+.+++.+ +. .. ..| +..|..+++++ ++++++. ++.|++++|++ ++..
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~-~~~i~~~sG~~-a~~~ 108 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT-EAALVFQSGFN-TNQG 108 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC-CcEEEECcHHH-HHHH
Confidence 567899999886 577788888887665 22 21 234 23354555554 4455564 45788888855 5557
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
++..++++||.|++++|+|+.+...+...|++++.++ .+|++++++.+++ +++++|++++++||||.+.+.+
T Consensus 109 a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~ 183 (385)
T TIGR01825 109 VLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLP 183 (385)
T ss_pred HHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHH
Confidence 7788899999999999999998877778888887764 4678888887653 3678888889999999999999
Q ss_pred HHHHHHhC-CCeEEEccCCcCccCC--CC-chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868 239 DLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (334)
Q Consensus 239 ~l~~l~~~-~~~lIvDeay~~~~~~--~~-~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~- 312 (334)
++.++++. ++++|+||+|..+... +. .....+ ..+++++++||||.||++| ||+++++++++.+.+....+
T Consensus 184 ~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~~~~~~~~~~~~~~~~~ 260 (385)
T TIGR01825 184 EIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAGHKELIEYLKNRARPFL 260 (385)
T ss_pred HHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEecCHHHHHHHHHhCcccc
Confidence 99999987 9999999999876432 11 111111 2567899999999998766 99999999999887665432
Q ss_pred ---CCcHHHHHHHHHHhc
Q 019868 313 ---NVSVAAEVAACAALQ 327 (334)
Q Consensus 313 ---~~~~~~q~aa~~~L~ 327 (334)
..+++.+.++.++|+
T Consensus 261 ~~~~~~~~~~~a~~~al~ 278 (385)
T TIGR01825 261 FSTAQPPAVVAALAAAVD 278 (385)
T ss_pred ccCCCCHHHHHHHHHHHH
Confidence 235666777777664
No 136
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.88 E-value=1.2e-21 Score=189.43 Aligned_cols=224 Identities=20% Similarity=0.183 Sum_probs=163.2
Q ss_pred CCeeecCCC-CCCCCCCHHHHHHHhc-Cc-CC-------CCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FP-------YIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~-------~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+.++++.+ .++++++|.+++++.+ +. .+ ..|+.. ...+|++++|+++|. ++.|++++|+ ++...++
T Consensus 46 ~~~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~-~~~i~~~sG~-~a~~~~i 123 (410)
T PRK13392 46 RRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK-ESALLFTSGY-VSNDAAL 123 (410)
T ss_pred ceEEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC-CCEEEECcHH-HHHHHHH
Confidence 446666655 6799999999988765 22 21 123333 467999999999995 5778888886 5555666
Q ss_pred HHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHH
Q 019868 164 RCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
..+. .+||.|+++...|..+...++..|+++..++.+ |.+.+++.++ .+++++|++++|+||||.+++.+
T Consensus 124 ~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~ 198 (410)
T PRK13392 124 STLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIE 198 (410)
T ss_pred HHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHH
Confidence 6554 488988888778887777778889988777532 3444444432 25789999999999999999999
Q ss_pred HHHHHHhC-CCeEEEccCCcCccCC--CCch-hhhcCCCc-EEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868 239 DLLKILEM-PILVVLDEAYTEFSGL--ESRM-EWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (334)
Q Consensus 239 ~l~~l~~~-~~~lIvDeay~~~~~~--~~~~-~~~~~~~~-~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~- 312 (334)
++.++++. ++++|+||+|....++ +... ...+..++ .++++||||.||++| ||+++++++++.+++....+
T Consensus 199 ~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~ 275 (410)
T PRK13392 199 AICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFI 275 (410)
T ss_pred HHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchh
Confidence 99999987 9999999999843321 1111 11111122 488999999999988 99999999999888777543
Q ss_pred ---CCcHHHHHHHHHHhcC
Q 019868 313 ---NVSVAAEVAACAALQN 328 (334)
Q Consensus 313 ---~~~~~~q~aa~~~L~~ 328 (334)
..+++.+.++.++|+.
T Consensus 276 ~s~~~~~~~~~a~~aaL~~ 294 (410)
T PRK13392 276 FTTALPPAVAAGATAAIRH 294 (410)
T ss_pred ccCcCCHHHHHHHHHHHHH
Confidence 3566788888888865
No 137
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.88 E-value=2.8e-21 Score=186.70 Aligned_cols=213 Identities=15% Similarity=0.153 Sum_probs=160.7
Q ss_pred CCCCCCeeecCCCCC--CCCCCH---HHHHH-HhcCc-CCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDANEN--PYGPPP---EVREA-LGQLK-FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~~~~---~v~~a-l~~~~-~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
...+-+.+.|..++. ++..+. .+.++ +..+. ....| ++.|..+|+++++++++. +++++++|+++++..+
T Consensus 7 ~~~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~g~--~~vv~t~~Gt~Al~la 84 (431)
T cd00617 7 KEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLFGF--KHIIPTHQGRGAENIL 84 (431)
T ss_pred HHcCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHHCC--CeEEEcCCHHHHHHHH
Confidence 335567788888887 666552 44332 33332 22458 677999999999999996 4899999999999999
Q ss_pred HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC----------CCCCCHHHHHHhcccC---CceEEEEeCCCC
Q 019868 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS----------DFSLNVELIADAVERE---KPKCIFLTSPNN 229 (334)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~----------~~~~d~~~l~~~l~~~---~~~~i~l~~p~N 229 (334)
+.++++|||+| +++|.|..|...+...|++++.++.+. .+.+|++++++++++. ++++|++++|||
T Consensus 85 ~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N 163 (431)
T cd00617 85 FSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNN 163 (431)
T ss_pred HHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcC
Confidence 99999999987 689999999999999999999998542 2459999999999732 378999999999
Q ss_pred cc-ccCCcHHHHHHHHhC----CCeEEEccCCcCc--cC-----CCCchhhhcCCCcEEEEcCCchhhcccccc------
Q 019868 230 PD-GSIINDEDLLKILEM----PILVVLDEAYTEF--SG-----LESRMEWVKKHDNLIVLRTFSKRAGLAGLR------ 291 (334)
Q Consensus 230 Pt-G~~~~~~~l~~l~~~----~~~lIvDeay~~~--~~-----~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R------ 291 (334)
|+ |.+++.++++++.++ +++||+|++..-. .+ ++.....+ .+.++.+.|++|.+.++|+|
T Consensus 164 ~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si--~ei~~e~~s~sd~~~mS~~K~~~~~~ 241 (431)
T cd00617 164 TAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSI--AEIAREMFSYADGCTMSAKKDGLVNI 241 (431)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCH--HHHHHHhhccCCEEEEEeecCCCCcc
Confidence 98 999999887666553 9999999994321 11 11000001 12245678899999999998
Q ss_pred hheeEcCH-HHHHHHHHh
Q 019868 292 VGYGAFPL-SIIEYLWRA 308 (334)
Q Consensus 292 ~G~l~~~~-~~i~~l~~~ 308 (334)
.||+++++ +++++++..
T Consensus 242 GG~i~~~d~~l~~~~~~~ 259 (431)
T cd00617 242 GGFLALRDDELYEEARQR 259 (431)
T ss_pred ceEEEeCcHHHHHHHHHh
Confidence 56999976 688888754
No 138
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.88 E-value=2.3e-21 Score=186.40 Aligned_cols=191 Identities=15% Similarity=0.155 Sum_probs=152.5
Q ss_pred CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCC
Q 019868 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRK 200 (334)
Q Consensus 125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~ 200 (334)
+|+++...+|++.+|++.|.+ +.++++++++++..++.+++++||+|+++.|+|.... ..+...|+++..++.
T Consensus 60 r~~~p~~~~le~~lA~l~g~~--~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~- 136 (398)
T PRK08249 60 RNTNPTVQAFEEKVRILEGAE--AATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET- 136 (398)
T ss_pred CCCChHHHHHHHHHHHHhCCC--eEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-
Confidence 457777899999999999953 4666677789999999989999999999999998643 334568998887752
Q ss_pred CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..+.... ... ....++++
T Consensus 137 ----~d~e~l~~~i~-~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~-~l~----~~~Divv~ 206 (398)
T PRK08249 137 ----GDHEQIEAEIA-KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQN-PLA----LGADLVIH 206 (398)
T ss_pred ----CCHHHHHHhcC-CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCC-chh----hCCCEEec
Confidence 58999999997 689999999999999999999999999987 99999999998654322 111 23348889
Q ss_pred CCchhhcccccch-heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 280 TFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 280 S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
|+||.++.+|.++ ||+++++++++.++..+.. ..++++.++.+...|+.
T Consensus 207 S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~t 258 (398)
T PRK08249 207 SATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKT 258 (398)
T ss_pred cCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcch
Confidence 9999998677776 7777788998888766554 45677777777666653
No 139
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.88 E-value=2.9e-21 Score=186.21 Aligned_cols=192 Identities=16% Similarity=0.188 Sum_probs=152.8
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|+++|.+ +.++++++++++..++..++++||+|+++.|.|.. +...+...|+++..++.
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~~--~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 137 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGGE--AAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDL 137 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCC
Confidence 4467778899999999999974 34556677789999998899999999999998864 23345568999998875
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
. |+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+. ..+..+++
T Consensus 138 ~-----d~~~l~~~i~-~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~-~~l----~~g~Di~v 206 (403)
T PRK07503 138 T-----DPAALKAAIS-DKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQ-RPL----ELGADLVV 206 (403)
T ss_pred C-----CHHHHHHhcC-ccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCCEEE
Confidence 2 7899999997 589999999999999999999999999987 9999999999864332 111 12345999
Q ss_pred cCCchhhcccc-cchheeEcCHHHHHHHHHh--cCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA--KQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~--~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|+||.++.+| .|.|+++.+++++++++.. +.. ..++++.++.+...|+.
T Consensus 207 ~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~t 261 (403)
T PRK07503 207 HSATKYLGGHGDITAGLVVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKT 261 (403)
T ss_pred ccccccccCCCceeEEEEEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcch
Confidence 99999998765 7889999889988887632 322 56788888777776664
No 140
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.88 E-value=4.3e-21 Score=184.65 Aligned_cols=204 Identities=19% Similarity=0.159 Sum_probs=157.8
Q ss_pred eeecCCCCCCCCCCHHHHHHHhc-CcC-----CCCCCCc-C----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 97 IVKIDANENPYGPPPEVREALGQ-LKF-----PYIYPDP-E----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~~~-----~~~Yp~~-g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
.+.|+.+... ++|+.+++++.+ +.. ...|+.. + ..++|+.+++++++++++|++++|+++++..++.+
T Consensus 18 ~~yl~~~~~~-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 18 RVFFDNPAGT-QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRA 96 (397)
T ss_pred eEEecCCccC-CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHH
Confidence 5888776554 356777777654 211 1235432 2 46899999999999888899999999999888776
Q ss_pred h---cCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 166 V---LDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 166 l---~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
+ +++||+|+++++.|... ...++..|++++.++.+. ++.+|++++++.++ +++++|++++|+||||.+.+.
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~ 175 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS-PRTRLVAVTAASNTLGSIVDL 175 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC-CCceEEEEeCCCCCCCccCCH
Confidence 5 58999999999988653 345677899999998653 67899999999997 679999999999999999999
Q ss_pred HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
+++.++++. ++++|+|+++.... ....+.+.+..+++.|++|.+ |+|+||+++++++++.+....
T Consensus 176 ~~i~~~~~~~~~~~ivD~a~~~~~----~~~~~~~~~~d~~~~s~~K~~---g~~~G~l~~~~~~~~~l~~~~ 241 (397)
T TIGR01976 176 AAITELVHAAGALVVVDAVHYAPH----GLIDVQATGADFLTCSAYKFF---GPHMGILWGRPELLMNLPPYK 241 (397)
T ss_pred HHHHHHHHHcCCEEEEehhhhccc----cCCCHHHcCCCEEEEechhhc---CCceEEEEEcHHHHhhCCCcc
Confidence 999999987 99999999975211 111122334557789999976 457999999999888776543
No 141
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.87 E-value=8.2e-21 Score=179.16 Aligned_cols=222 Identities=22% Similarity=0.177 Sum_probs=162.7
Q ss_pred eeecCCCCC-CCCCCHHHHHHHhc-Cc-CCC---CC----C-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 97 IVKIDANEN-PYGPPPEVREALGQ-LK-FPY---IY----P-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 97 ~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~---~Y----p-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
+++|+.++. ..+.+|++.+++++ ++ ..+ .| . .+...+++++++++++.+ +.| +++++++++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-~~i-v~~sg~~a~~~~~~~ 80 (349)
T cd06454 3 VLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKE-AAL-VFSSGYAANDGVLST 80 (349)
T ss_pred ceecccCCccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCC-CEE-EeccHHHHHHHHHHH
Confidence 566766543 44556889988876 32 111 12 1 223578999999999974 444 445556787777888
Q ss_pred hcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc----CCceEEEEeCCCCccccCCcHHHHH
Q 019868 166 VLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
++++||+|++++|.|+.+...++..|++++.++. +|++.+++.+++ .+++++++++++||||...+.+++.
T Consensus 81 ~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~ 155 (349)
T cd06454 81 LAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV 155 (349)
T ss_pred hcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence 8899999999999999988888889999988762 477788887763 3578888889999999999999999
Q ss_pred HHHhC-CCeEEEccCCcCccCC--CCchhh--hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC----C
Q 019868 242 KILEM-PILVVLDEAYTEFSGL--ESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP----Y 312 (334)
Q Consensus 242 ~l~~~-~~~lIvDeay~~~~~~--~~~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~----~ 312 (334)
++++. ++++|+|++|...... ...... ....+++++++|+||.|+++| ||+++++++++.+...... .
T Consensus 156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~~~~~~~~~~~~~~~~~~ 232 (349)
T cd06454 156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKELIDYLRSYARGFIFST 232 (349)
T ss_pred HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCHHHHHHHHHhchhhhccC
Confidence 99988 9999999999743221 111111 123467899999999998655 9999999988887665443 2
Q ss_pred CCcHHHHHHHHHHhcC
Q 019868 313 NVSVAAEVAACAALQN 328 (334)
Q Consensus 313 ~~~~~~q~aa~~~L~~ 328 (334)
..+...+.++.++|+.
T Consensus 233 ~~~~~~~~a~~~~l~~ 248 (349)
T cd06454 233 SLPPAVAAAALAALEV 248 (349)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4566666676776653
No 142
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.87 E-value=2.7e-21 Score=186.12 Aligned_cols=192 Identities=19% Similarity=0.202 Sum_probs=149.9
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|+++|.+.. +++++++.++..++.+++++||+|+++.|.|+.+... +...|++++.++
T Consensus 60 ~r~~~p~~~~Le~~lA~l~G~~~~--~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd- 136 (398)
T PRK07504 60 SRYSNPTVDMFEKRMCALEGAEDA--RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD- 136 (398)
T ss_pred ecCCCchHHHHHHHHHHHhCCCee--eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC-
Confidence 457888899999999999998654 3456667788877777889999999999999865443 345799988885
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.+|+++++++++ +++|+|++++|+||||.+++.+++.++++. ++++|+|++|..+... ... ..+.++++
T Consensus 137 ----~~d~e~l~~ai~-~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~~~-~~~----~~gaDivv 206 (398)
T PRK07504 137 ----GLDLDNWEKAVR-PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPLFQ-KPL----ELGAHIVV 206 (398)
T ss_pred ----CCCHHHHHHhcC-cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccccC-Cch----hhCCCEEE
Confidence 368999999997 689999999999999999999999999987 9999999999865432 111 22456899
Q ss_pred cCCchhhcccccchh-eeEcCHHHHHH-HHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLAGLRVG-YGAFPLSIIEY-LWRAKQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~G~R~G-~l~~~~~~i~~-l~~~~~--~~~~~~~~q~aa~~~L~~ 328 (334)
.|++|.|+.+|+|+| +++.+++.+.. +..... ...++++.++++...|+.
T Consensus 207 ~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t 260 (398)
T PRK07504 207 YSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLET 260 (398)
T ss_pred eeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccch
Confidence 999999998999996 56667766643 332222 245777777777776664
No 143
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.87 E-value=4e-21 Score=184.50 Aligned_cols=188 Identities=18% Similarity=0.187 Sum_probs=148.5
Q ss_pred CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCC
Q 019868 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKS 201 (334)
Q Consensus 126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~ 201 (334)
|+++...+|++.+|+++|. +++++++|+++++..++.+++++||+|+++.+.|+... ..+...|++++.++.+
T Consensus 58 ~~~p~~~~le~~la~l~g~--~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 134 (390)
T PRK08133 58 FTNPTVTMFQERLAALEGA--EACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT- 134 (390)
T ss_pred CCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC-
Confidence 4556688999999999985 46889999999999999999999999999999886533 3455689999998752
Q ss_pred CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|....... +. ..+..++++|
T Consensus 135 ----d~~~l~~~i~-~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~-pl----~~g~Divv~S 204 (390)
T PRK08133 135 ----DLDAWRAAVR-PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQ-PL----KLGADVVIHS 204 (390)
T ss_pred ----CHHHHHHhcC-cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCC-ch----hhCCcEEEee
Confidence 7899999997 689999999999999999999999999987 99999999986544321 11 1233588999
Q ss_pred Cchhhcccccch-heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHh
Q 019868 281 FSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAAL 326 (334)
Q Consensus 281 ~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L 326 (334)
+||.++.+|.|+ ||++++++.++.+.+.... ..+++..+..+...+
T Consensus 205 ~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl 253 (390)
T PRK08133 205 ATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGL 253 (390)
T ss_pred cceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHccc
Confidence 999999899998 5667788877766544333 345666655554443
No 144
>PLN02822 serine palmitoyltransferase
Probab=99.87 E-value=1.4e-20 Score=185.27 Aligned_cols=225 Identities=16% Similarity=0.169 Sum_probs=169.3
Q ss_pred CCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CCCC-------C-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FPYI-------Y-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~~~-------Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
++++++||..+.. .+..+|++++++.+ +. ++.+ | +..+..+|+++||++++. ++.|++++|.+ ++..
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-~~~i~~s~G~~-a~~s 184 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-PDSILYSYGLS-TIFS 184 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-CCEEEECCHHH-HHHH
Confidence 4678899998744 67788999888765 32 2222 3 334578999999999995 57899998887 5678
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---c-----CCc-eEEEEeCCCCccc
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---R-----EKP-KCIFLTSPNNPDG 232 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~-----~~~-~~i~l~~p~NPtG 232 (334)
++.+++++||.|++....|..+...+...|.+++.++.+ |.+.++..++ . +++ ++|+++.++|+||
T Consensus 185 ai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G 259 (481)
T PLN02822 185 VIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSG 259 (481)
T ss_pred HHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCC
Confidence 888899999999988888888877788889999998853 3333333332 1 234 6888889999999
Q ss_pred cCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCc---hhhh--cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 233 SIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~---~~~~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
.+.+.+++.++++. ++++|+||+|..+..+... .... ...+.++++.||||.||++| ||+++++++++.++
T Consensus 260 ~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~~ii~~~~ 336 (481)
T PLN02822 260 QIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSARVVDHQR 336 (481)
T ss_pred CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCHHHHHHHH
Confidence 99999999999987 9999999999865543211 1111 11356799999999999999 99999999999887
Q ss_pred HhcCC--CC--CcHHHHHHHHHHhc
Q 019868 307 RAKQP--YN--VSVAAEVAACAALQ 327 (334)
Q Consensus 307 ~~~~~--~~--~~~~~q~aa~~~L~ 327 (334)
..... |+ .++..+.++.++|+
T Consensus 337 ~~~~~~~fsa~lPp~~~~Aa~~aL~ 361 (481)
T PLN02822 337 LSSSGYVFSASLPPYLASAAITAID 361 (481)
T ss_pred hcCCceeeccccCHHHHHHHHHHHH
Confidence 55443 44 34777888877775
No 145
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.87 E-value=5.4e-21 Score=183.60 Aligned_cols=192 Identities=15% Similarity=0.142 Sum_probs=151.5
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|+++|.+ ..++++++++++..++.+++++||+|+++.|.|+. +...+...|+++..++.
T Consensus 54 ~r~~~p~~~~le~~lA~l~g~~--~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 54 SRLGNPTVSNLEGRIAFLEGTE--AAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 4567888899999999999965 36677777889999999899999999999998863 34445568999998875
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
+ |+++++++++ +++++|++++|+||+|.+.+.+++.++++. ++++|+|++|....... .. .....+++
T Consensus 132 ~-----d~e~l~~~i~-~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~-~~----~~g~Divv 200 (391)
T TIGR01328 132 A-----IPEEVKAHIK-DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTN-PV----ALGVDVVV 200 (391)
T ss_pred C-----CHHHHHHhhc-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCC-ch----hcCCCEEE
Confidence 3 7899999987 689999999999999999999999999987 99999999998543321 11 22345899
Q ss_pred cCCchhhcccccc-hheeEcCHHHHHHHHHhcC--C--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLAGLR-VGYGAFPLSIIEYLWRAKQ--P--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~G~R-~G~l~~~~~~i~~l~~~~~--~--~~~~~~~q~aa~~~L~~ 328 (334)
+|+||.+|.+|.+ .|++++++++++.+++... . ..+++...+++...|+.
T Consensus 201 ~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~t 255 (391)
T TIGR01328 201 HSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKT 255 (391)
T ss_pred ccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCc
Confidence 9999999988887 5778888998888775321 2 34566666666665653
No 146
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.87 E-value=4.8e-21 Score=182.63 Aligned_cols=190 Identities=17% Similarity=0.183 Sum_probs=150.9
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|++.|.+. .++++|+++++..++ .++++||+|++++|.|+. +...+...|++++.++.
T Consensus 47 ~r~~~pt~~~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 123 (366)
T PRK08247 47 SRTGNPTRGVLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNT 123 (366)
T ss_pred cCCCCchHHHHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECC
Confidence 45788889999999999999754 466777788998876 478999999999999985 34445568999998874
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++++|++++|+||+|...+.+++.++++. ++++|+||+|....... +. ..+.++++
T Consensus 124 -----~d~~~l~~~i~-~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~-p~----~~g~di~i 192 (366)
T PRK08247 124 -----ASLKAIEQAIT-PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQR-PL----EEGADIVI 192 (366)
T ss_pred -----CCHHHHHHhcc-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-ch----hcCCcEEE
Confidence 38899999997 589999999999999999999999999987 99999999995322211 11 23567999
Q ss_pred cCCchhhcc-cccchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGL-AGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl-~G~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
+|+||.++- .+.+.|+++++ +++++.+...+.. ..++++.|+++...|+
T Consensus 193 ~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 193 HSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred eecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccC
Confidence 999998863 35689999996 6787877655544 4577888888877765
No 147
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.87 E-value=8.8e-21 Score=181.64 Aligned_cols=191 Identities=17% Similarity=0.189 Sum_probs=152.5
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++.+++++|. +++++++++++++..++.+++++||+|+++.+.|+. +...+...|++++.++.
T Consensus 49 ~r~~~p~~~~le~~la~l~g~--~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~ 126 (380)
T TIGR01325 49 SRYANPTVAAFEERIAALEGA--ERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDP 126 (380)
T ss_pred ecCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECC
Confidence 457777789999999999986 468889999999999999999999999999988864 33456678999998875
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
+ |+++++++++ +++++|++++|+||+|.+.+.+++.++++. ++++|+|++|..+..... . ..+..+++
T Consensus 127 ~-----d~~~l~~~i~-~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~p-l----~~g~Divv 195 (380)
T TIGR01325 127 T-----DLNAWEAAVK-PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQP-L----KLGADVVV 195 (380)
T ss_pred C-----CHHHHHHhcC-CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hhCCCEEE
Confidence 3 7899999886 689999999999999999999999999987 999999999986543221 1 22446899
Q ss_pred cCCchhhcccccch-heeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
.|++|.++.+|.++ |++++++++++.+.+.... ..+++....++...++
T Consensus 196 ~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~ 247 (380)
T TIGR01325 196 YSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLE 247 (380)
T ss_pred eeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccC
Confidence 99999998788886 7788888888887765543 2345555555544444
No 148
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.87 E-value=2.1e-21 Score=188.14 Aligned_cols=163 Identities=18% Similarity=0.202 Sum_probs=136.9
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|+++|. +..++++++++++..++.+++++||+|+++.+.|+. +...+...|++++.++.
T Consensus 52 sr~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~ 129 (418)
T TIGR01326 52 SRLMNPTTDVLEQRIAALEGG--VAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDP 129 (418)
T ss_pred ECCCChhHHHHHHHHHHHhCC--CeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECC
Confidence 455777789999999999995 467888899999999998899999999999999864 34456678999999874
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
+ |+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+ . ..+.++++
T Consensus 130 ~-----d~~~l~~~l~-~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~~---l-~~g~Divv 198 (418)
T TIGR01326 130 D-----DPEEFEKAID-ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-RP---I-DHGADIVV 198 (418)
T ss_pred C-----CHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-Cc---h-hcCCeEEE
Confidence 2 7899999997 689999999999999999999999999987 9999999999743211 11 1 23568999
Q ss_pred cCCchhhcccccchheeEcCH
Q 019868 279 RTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 279 ~S~SK~~gl~G~R~G~l~~~~ 299 (334)
+|+||.++.+|+|+||+++++
T Consensus 199 ~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 199 HSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred ECccccccCCccceEEEEEec
Confidence 999999999999999999854
No 149
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.87 E-value=1.3e-20 Score=180.36 Aligned_cols=192 Identities=17% Similarity=0.140 Sum_probs=151.9
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-HHHH---HHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-YEFD---AAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-~~~~---~~~~G~~v~~v~~ 199 (334)
.+|+++....|++++|++.| .+++++++|+++++..++.+++++||+|+++.|+|+. +... ....|+++..++.
T Consensus 48 ~R~~npt~~~Le~~lA~leg--~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~ 125 (388)
T PRK08861 48 TRSGNPNRGLLEQTLSELES--GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ 125 (388)
T ss_pred cCCCCchHHHHHHHHHHHhC--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC
Confidence 55688889999999999999 4799999999999999999999999999999999985 4322 2335788888752
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+|++|.......+ . ..+-.+++
T Consensus 126 -----~d~e~l~~~i~-~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~p-l----~~GaDivv 194 (388)
T PRK08861 126 -----SDAAALDAALA-KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKP-L----ELGADFVI 194 (388)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCC-c----ccCCCEEE
Confidence 48899999987 589999999999999999999999999987 999999999986443211 1 22345999
Q ss_pred cCCchhhcc-cccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl-~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|++|.++- .+.+.|++++ ++++.+.++..+.. ..++++..+.+...|+.
T Consensus 195 ~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T 248 (388)
T PRK08861 195 HSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT 248 (388)
T ss_pred eecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCC
Confidence 999998753 3577899987 45677767655544 34667766666665553
No 150
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.86 E-value=1.3e-20 Score=181.64 Aligned_cols=192 Identities=18% Similarity=0.192 Sum_probs=150.7
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++....|++.+|++.|. ++++++++| ++++.+++.+++++||+|+++.|.|+. +...+...|.+++.++.
T Consensus 55 ~R~~~p~~~~Le~~lA~l~g~-~~~v~~~sG-~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~ 132 (405)
T PRK08776 55 TRSGNPTRDLLGEALAELEGG-AGGVITATG-MGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL 132 (405)
T ss_pred cCCCChHHHHHHHHHHHHhCC-CceEEEcCH-HHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC
Confidence 456777788999999999996 455655555 799999999999999999999999986 44555667888888864
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+. ..+..+++
T Consensus 133 -----~d~~~l~~~i~-~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~-~pl----~~gaDivv 201 (405)
T PRK08776 133 -----TDPRSLADALA-QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQ-KPL----EFGADLVL 201 (405)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccC-Ccc----cccCCEEE
Confidence 37899999987 689999999999999999999999999987 9999999999753221 111 12334999
Q ss_pred cCCchhhccc-ccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLA-GLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~-G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
.|.+|.++.+ +...|++++ ++++.+++...... ++++++.++++...++.
T Consensus 202 ~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl~t 255 (405)
T PRK08776 202 HSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRGLRT 255 (405)
T ss_pred ecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhCc
Confidence 9999998655 577899877 57777777654443 45788888887776664
No 151
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.86 E-value=1e-20 Score=182.30 Aligned_cols=192 Identities=16% Similarity=0.150 Sum_probs=153.4
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC----hhHHHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF----TMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y----~~~~~~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|++.|.+ +.+++++++.++..++.+++++||+|+++...| ..+...++..|++++.++.
T Consensus 65 ~r~~~p~~~~le~~lA~l~g~~--~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~ 142 (403)
T PRK07810 65 SRYGNPTVSMFEERLRLIEGAE--ACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDG 142 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCC--cEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECC
Confidence 4578888899999999999954 677777778898888888999999999987555 4455666778999999873
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|........ . ..+.++++
T Consensus 143 -----~d~~~l~~ai~-~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~-~----~~gaDivv 211 (403)
T PRK07810 143 -----EDLSQWEEALS-VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRG-L----PLGADVVV 211 (403)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCCh-h----hcCCcEEE
Confidence 38899999997 689999999999999999999999999987 999999999985543221 1 22456999
Q ss_pred cCCchhhcccccch-heeEcCHHHHH-HHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLAGLRV-GYGAFPLSIIE-YLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~G~R~-G~l~~~~~~i~-~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
.|++|.++..|.++ |+++++++.+. .++..... ..++++.++++...|+.
T Consensus 212 ~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t 265 (403)
T PRK07810 212 YSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWVLLKGLET 265 (403)
T ss_pred ccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHhccCc
Confidence 99999998889997 88888877664 34433222 46788888888777764
No 152
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.86 E-value=1.7e-20 Score=178.97 Aligned_cols=171 Identities=20% Similarity=0.137 Sum_probs=142.4
Q ss_pred hHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcC---CCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCCC
Q 019868 131 SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD---PGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~---~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~ 202 (334)
..++|+.++++++++ +++|++++|+++++..++.++.. +||+|++++++|+.. ...++..|++++.++.+++
T Consensus 45 ~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 124 (373)
T cd06453 45 YEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD 124 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC
Confidence 457999999999987 78999999999999999999887 899999999999863 3445568999999997777
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
+.+|++++++.+. +++++|++++|+||||.+.+.+++.++++. ++++++|++|....... .+...+..+++.|+
T Consensus 125 ~~~d~~~l~~~l~-~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~----~~~~~~~d~~~~s~ 199 (373)
T cd06453 125 GQLDLEALEKLLT-ERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPV----DVQDLGCDFLAFSG 199 (373)
T ss_pred CCcCHHHHHHHhc-CCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceee----eccccCCCEEEecc
Confidence 8899999999997 589999999999999999999999999987 99999999987432111 11122345778899
Q ss_pred chhhcccccchheeEcCHHHHHHHHHh
Q 019868 282 SKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
+|.++. .++||+++++++++.+...
T Consensus 200 ~K~~~~--~g~g~~~~~~~~~~~~~~~ 224 (373)
T cd06453 200 HKMLGP--TGIGVLYGKEELLEEMPPY 224 (373)
T ss_pred ccccCC--CCcEEEEEchHHhhcCCCe
Confidence 998874 6689999999988876643
No 153
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.86 E-value=1.5e-20 Score=180.38 Aligned_cols=192 Identities=16% Similarity=0.134 Sum_probs=146.2
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++.+|+++|.+ +.|++++| +.++..++.+++++||+|+++.|.|+..... ....|+++..++.
T Consensus 56 ~r~~~pt~~~Le~~lA~l~G~~-~al~~~sG-~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 56 SRLGNPTVKLFEERMAVLEGGE-EALAFGSG-MAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred cCCCCcchHHHHHHHHHHhCCC-cEEEECCH-HHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 4568888899999999999953 45555545 5789899888999999999999988754433 3335666655542
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|.......+ . ..+..+++
T Consensus 134 -----~d~~~l~~~i~-~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~p-l----~~g~Div~ 202 (386)
T PRK06767 134 -----ETEADIENKIR-PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRP-L----ELGCDAVV 202 (386)
T ss_pred -----CCHHHHHHhhC-cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCc-h----hcCCcEEE
Confidence 37899999987 689999999999999999999999999987 999999999964332211 1 12345889
Q ss_pred cCCchhhcccccch-heeEcCHHHHHHHHHh-cCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLAGLRV-GYGAFPLSIIEYLWRA-KQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~G~R~-G~l~~~~~~i~~l~~~-~~~--~~~~~~~q~aa~~~L~~ 328 (334)
.|+||.++.+|.|+ ||++++++.++.+.+. ... ..++++.++++...|+.
T Consensus 203 ~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~t 256 (386)
T PRK06767 203 HSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT 256 (386)
T ss_pred ecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc
Confidence 99999998889885 8999998888765432 222 23567777777666654
No 154
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=8e-21 Score=183.01 Aligned_cols=226 Identities=21% Similarity=0.231 Sum_probs=165.6
Q ss_pred CCCCCeeecCCC--CCCCCC-CHHHHHHHhc-Cc----CCCCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LK----FPYIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLI 162 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~----~~~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~ 162 (334)
.++++++|+..+ .+.++. +|++.+++.+ +. ....|+.+...+|.+.++++++.+ +++|++++|+++++..+
T Consensus 40 ~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~a 119 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAA 119 (398)
T ss_pred CCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHH
Confidence 457788999876 456666 6888888765 22 124576655678999999998853 47999999999999999
Q ss_pred HHHhcCCC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868 163 MRCVLDPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 163 ~~~l~~~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
++....+| ++|+..+++|..+...+.. .|. ++..+|. .|++.+++.+. +++++|+++.++
T Consensus 120 l~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~-~~~~aviiep~~ 193 (398)
T PRK03244 120 FKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVD-DDTAAVFLEPIQ 193 (398)
T ss_pred HHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhc-CCeEEEEEeccc
Confidence 99766566 5677777888766544332 222 1222221 37899999885 578999999999
Q ss_pred CccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 229 NPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 229 NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
||+|.+++ .+++.++++. ++++|+||+|.+|...+... ...+..+++ .+|||.++ +|+|+||+++++++
T Consensus 194 ~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~~~~ 269 (398)
T PRK03244 194 GEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV---VTLAKGLG-GGLPIGACLAFGPA 269 (398)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCE---EEEchhhh-CCcccEEEEEcHHH
Confidence 99999997 5577777776 99999999998876433222 111112232 37899999 89999999999998
Q ss_pred HHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868 302 IEYLWRA--KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 302 i~~l~~~--~~~~~~~~~~q~aa~~~L~ 327 (334)
++.+... ...|+.+++++.++.++|+
T Consensus 270 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 297 (398)
T PRK03244 270 ADLLTPGLHGSTFGGNPVACAAALAVLD 297 (398)
T ss_pred HhhccCCCCcCCCCCCHHHHHHHHHHHH
Confidence 8877653 2347889999999999965
No 155
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=2.2e-20 Score=179.51 Aligned_cols=192 Identities=17% Similarity=0.127 Sum_probs=151.6
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|++.|. +++++++|+++++..++.+++++||+|++++|+|..+.. .+...|++++.++.
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g~--~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~ 137 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEGG--RHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDP 137 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhCC--CeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECC
Confidence 456888889999999999994 589999999999999999999999999999999997653 45668999998864
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
. +.+.++++++ +++|+|++++|+||+|...+.+++.++++. ++++|+|++|.....- ... ..+..+++
T Consensus 138 ~-----~~~~l~~~i~-~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~~-~~l----~~GaDi~v 206 (394)
T PRK07050 138 L-----IGAGIADLIQ-PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLAF-KPF----EHGVDISV 206 (394)
T ss_pred C-----CHHHHHHhcC-CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccccccc-CHH----HcCCeEEE
Confidence 2 4578888886 689999999999999999999999999987 9999999999753321 111 22456999
Q ss_pred cCCchhhc-ccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAG-LAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
.|++|.++ ..|.+.|++++ ++++++.++..+.. .++++.....+...|++
T Consensus 207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t 260 (394)
T PRK07050 207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPS 260 (394)
T ss_pred EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc
Confidence 99999885 33456898876 67888877765553 45666666665554443
No 156
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=7.6e-21 Score=182.87 Aligned_cols=229 Identities=18% Similarity=0.235 Sum_probs=163.4
Q ss_pred CCCCCeeecCCC--CCCCCC-CHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYGP-PPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~-~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++.++||+..| .+.++. .|.+.+++.+ +.. ...|+.+...+|.+.++++.+. +++++++|+++++..++
T Consensus 36 ~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al 113 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELSGM--DKVFFCNSGAEANEAAI 113 (396)
T ss_pred CCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHH
Confidence 456788999876 445666 4888888765 221 1335554456677777777654 79999999999999999
Q ss_pred HHhcCCC-------CEEEEcCCCChhHHHHHHHCCCeEE-E---eeCCCCC----CCCHHHHHHhcccCCceEEEEeCCC
Q 019868 164 RCVLDPG-------DKIVDCPPTFTMYEFDAAVNGAAVV-K---VPRKSDF----SLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 164 ~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~G~~v~-~---v~~~~~~----~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
+.+...+ ++|++.++.|..+...+...+.... . .+...++ ..|++++++++. +++++|+++.++
T Consensus 114 ~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~-~~~~~vii~p~~ 192 (396)
T PRK02627 114 KLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAIT-DKTAAVMLEPIQ 192 (396)
T ss_pred HHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcC-CCeEEEEEeccc
Confidence 9665333 6799999999877655444332221 1 1111211 228999999996 689999999889
Q ss_pred Cccc-cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 229 NPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 229 NPtG-~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
||+| ..++.+.+++|.+. ++++|+||+|.+|...+... ...+...+ +.+|||.++ +|+|+||+++++++
T Consensus 193 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~~~-~G~rig~~~~~~~~ 268 (396)
T PRK02627 193 GEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPD---IMTLAKGLG-GGVPIGAVLAKEKV 268 (396)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCC---EEEEcchhh-CCcccEEEEEcHHH
Confidence 9999 67787777776654 99999999999886533211 11222222 336999999 99999999999999
Q ss_pred HHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868 302 IEYLWRA--KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 302 i~~l~~~--~~~~~~~~~~q~aa~~~L~ 327 (334)
++.+... ...++.++++|+++.++|+
T Consensus 269 ~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 296 (396)
T PRK02627 269 ADVFTPGDHGSTFGGNPLACAAALAVIE 296 (396)
T ss_pred HhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 8887653 2347889999999999986
No 157
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.85 E-value=4.7e-20 Score=175.76 Aligned_cols=198 Identities=14% Similarity=0.089 Sum_probs=153.3
Q ss_pred CCCCCCCHHHHHHHhcCcCCCCCCC--cChHHHHHHHHHhcCCCC--CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868 104 ENPYGPPPEVREALGQLKFPYIYPD--PESRRLRAALAKDSGLES--DHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (334)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Yp~--~g~~~lr~~lA~~~~~~~--~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~ 179 (334)
--|.++++.+.+++...-. ++.+. ....++|+.+++++|.++ +.|+++.|+++++..++..+..+||+|+++.++
T Consensus 11 pgP~~~~~~~~~a~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~ 89 (368)
T PRK13479 11 PGPLTTSRTVREAMLRDWG-SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNG 89 (368)
T ss_pred CCCCCCCHHHHHHhCCCCC-CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCC
Confidence 3456677889888866322 22221 246789999999999865 458889999999999999999999999998887
Q ss_pred ChhH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868 180 FTMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (334)
Q Consensus 180 y~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea 255 (334)
|... ...++..|++++.++.+.++.+|++++++++++ .++++|++++|+||||...+.+++.++++. ++++|+|+
T Consensus 90 ~~~~~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa- 168 (368)
T PRK13479 90 AYGARIAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDA- 168 (368)
T ss_pred chHHHHHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEc-
Confidence 7554 467788999999999766678999999998863 356789999999999999999999999987 99999995
Q ss_pred CcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHHh
Q 019868 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
|+.+...+ .. +...+..+++.|++|.+ |.+| +||+++++++++.+...
T Consensus 169 ~~~~g~~~--~~-~~~~~~d~~v~s~~K~l~g~~G--~G~l~~~~~~~~~~~~~ 217 (368)
T PRK13479 169 MSSFGAIP--ID-IAELGIDALISSANKCIEGVPG--FGFVIARRSELEACKGN 217 (368)
T ss_pred ccccCCcc--cc-ccccCceEEEecCccccccCCC--ceEEEECHHHHHHhhcC
Confidence 44443221 11 22223457788999964 6677 69999999988877653
No 158
>PRK07179 hypothetical protein; Provisional
Probab=99.85 E-value=1.2e-19 Score=175.48 Aligned_cols=209 Identities=17% Similarity=0.160 Sum_probs=160.3
Q ss_pred CCCCeeecCCCC-CCCCCCHHHHHHHhc-Cc-C------CCCCC--CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDANE-NPYGPPPEVREALGQ-LK-F------PYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~------~~~Yp--~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
++..+++++.++ -++...|++++++.+ +. . ...|. .....+|++.+|+++|.+ .+++++|+++++..
T Consensus 52 ~g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~--~~~~~~sG~~An~~ 129 (407)
T PRK07179 52 PGPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFE--SCLLCQSGWAANVG 129 (407)
T ss_pred CCCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCC--cEEEECCHHHHHHH
Confidence 456789997764 477778888887765 21 1 12232 224678999999999964 57889999999999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
++++++.+||.|++..+.|......++..|++++.++. .|++++++.+++.++++|++++++||||.+.+.+++.
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~ 204 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----NDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIV 204 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-----CCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHH
Confidence 99999999999999999998887777788988877642 4899999998643578899999999999999999999
Q ss_pred HHHhC-CCeEEEccCCcCccCCCC---chhhhcCCC-cEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 242 KILEM-PILVVLDEAYTEFSGLES---RMEWVKKHD-NLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 242 ~l~~~-~~~lIvDeay~~~~~~~~---~~~~~~~~~-~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
++++. ++++|+||+|.....+.. .....+..+ .++++.|+||.+| .|+||+++++++++.+.....+
T Consensus 205 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~~~~~~~~~~~~~ 276 (407)
T PRK07179 205 DIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPRELAEYVPFVSYP 276 (407)
T ss_pred HHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCHHHHHHHHHhCcC
Confidence 99987 999999999975433221 121222112 2588999999886 3799999999998888765543
No 159
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.85 E-value=5.1e-20 Score=177.14 Aligned_cols=203 Identities=16% Similarity=0.238 Sum_probs=153.2
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-C-----CcChHHHHHHHH----HhcCCCCCCEEEeCC-HHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPESRRLRAALA----KDSGLESDHILVGCG-ADELIDLIMR 164 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p-----~~g~~~lr~~lA----~~~~~~~~~I~~t~G-~~~~i~~~~~ 164 (334)
.+++|+++++++++|+.+.++..+......| + ..|..+++++++ +++|++.++++++++ ++++...+..
T Consensus 21 ~~~~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~ 100 (398)
T cd00613 21 SMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLA 100 (398)
T ss_pred CcccccccccCCcCcHHHHHHhccccCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHH
Confidence 4599999999999988887766554111234 2 346555555555 556877767877774 4445555555
Q ss_pred HhcCC--CCEEEEcCCCChhHHHHHHHCC----CeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH-
Q 019868 165 CVLDP--GDKIVDCPPTFTMYEFDAAVNG----AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND- 237 (334)
Q Consensus 165 ~l~~~--gd~Vl~~~p~y~~~~~~~~~~G----~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~- 237 (334)
+++.+ ||+|++++|.|+.+...+...| ++++.++.++++.+|++++++++. +++++|++++|+ |||.+.+.
T Consensus 101 ~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~t~~viv~~~~-~~G~~~~~l 178 (398)
T cd00613 101 AIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVS-EEVAALMVQYPN-TLGVFEDLI 178 (398)
T ss_pred HHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcC-CCeEEEEEECCC-CCceecchH
Confidence 55666 9999999999999988887777 999999876667899999999997 689999999985 89999886
Q ss_pred HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHHHH
Q 019868 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~~l 305 (334)
+++.++++. ++++|+|+++........ ....+.++++.|++|.+ ++ |+|+||+++++++++.+
T Consensus 179 ~~i~~la~~~g~~livD~~~~~~~~~~~----~~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~~~~~~ 246 (398)
T cd00613 179 KEIADIAHSAGALVYVDGDNLNLTGLKP----PGEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKELVRFL 246 (398)
T ss_pred HHHHHHHHhcCCEEEEEeccccccCCCC----hHHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhhhHhhC
Confidence 999999987 999999998754321111 11234679999999987 55 79999999998888764
No 160
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=4.8e-20 Score=176.93 Aligned_cols=192 Identities=18% Similarity=0.126 Sum_probs=146.6
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH-HHHHH---HCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY-EFDAA---VNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~---~~G~~v~~v~~ 199 (334)
.+|+++...+|++++|++++.+. .+++ +++++++..++.+++++||+|+++.|+|+.. ..... ..|+++..++.
T Consensus 56 ~r~~~p~~~~Le~~lA~~~g~~~-~i~~-~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~ 133 (388)
T PRK07811 56 ARTGNPTRTALEEQLAALEGGAY-GRAF-SSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL 133 (388)
T ss_pred cCCCCccHHHHHHHHHHHhCCCc-eEEe-CCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC
Confidence 34577889999999999999754 3444 5557999999999999999999999999853 33222 25887777653
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|....... +.. .+..+++
T Consensus 134 -----~d~e~l~~~i~-~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~-p~~----~gaDivv 202 (388)
T PRK07811 134 -----SDLDAVRAAIT-PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQ-PLA----LGADVVV 202 (388)
T ss_pred -----CCHHHHHHhcC-cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCC-chh----hCCcEEE
Confidence 48999999997 589999999999999999999999999987 99999999998654321 111 2345999
Q ss_pred cCCchhhcccc-cchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
.|++|.++.+| .+.||++++ +++.+.+...+.. ...++..++.+...|+.
T Consensus 203 ~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~t 256 (388)
T PRK07811 203 HSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKT 256 (388)
T ss_pred ecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc
Confidence 99999987654 567999874 6776766655443 34556666666666654
No 161
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.85 E-value=3.2e-20 Score=176.88 Aligned_cols=188 Identities=22% Similarity=0.187 Sum_probs=144.5
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~ 199 (334)
.+||++...+|++++|++. ..+ .++++++++++..++.+++++||+|++++|.|..+...+ ...|++++.++.
T Consensus 46 ~ry~~p~~~~Le~~lA~l~--~~~-~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 46 GRASNPTWRALEAALGELE--GAE-ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred ECCCCccHHHHHHHHHHHc--CCC-EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 5679999999999999999 344 455555567999999989999999999999998876644 347999999985
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
++++ + .+. +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+.. ....+++
T Consensus 123 ~~~~----~----~~~-~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~-~p~~----~g~Divv 188 (366)
T PRK07582 123 AGMA----E----AAL-AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQ-RPLE----LGADLVV 188 (366)
T ss_pred CChH----H----Hhc-cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcccc-Cchh----cCCcEEE
Confidence 4321 1 222 478999999999999999999999999987 9999999999642211 1211 2334899
Q ss_pred cCCchhh-cccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 279 RTFSKRA-GLAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 279 ~S~SK~~-gl~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|++|.+ |.+|+|+||+++ ++++++.+...+.. ..++++.++.+...|+.
T Consensus 189 ~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t 242 (366)
T PRK07582 189 ASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGT 242 (366)
T ss_pred ecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc
Confidence 9999987 456799999998 57888877765544 34677887777777764
No 162
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.85 E-value=2.6e-20 Score=177.73 Aligned_cols=196 Identities=20% Similarity=0.164 Sum_probs=153.5
Q ss_pred ecCCCCCCCCCCHHHHHHHhc-CcC---C---CCCCC-----cChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHH
Q 019868 99 KIDANENPYGPPPEVREALGQ-LKF---P---YIYPD-----PESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRC 165 (334)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~-~~~---~---~~Yp~-----~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~ 165 (334)
.|+.+.+++++|+.+.+++.+ +.. . ..|+. .+..++|+.++++++++. ++|++|+|+++++.+++.+
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~ 81 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG 81 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh
Confidence 577778888888888888764 211 1 12432 346789999999999864 4899999999999999999
Q ss_pred hcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 166 VLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 166 l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
++++||+|+++.+.|+.+. ..++..|.+++.++.+.++.+|+++++++++ +++++|++++|+||||.+++.+++.
T Consensus 82 ~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~-~~~~~v~~~~~~n~tG~~~~~~~i~ 160 (376)
T TIGR01977 82 LLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIK-TNTKLIVVSHASNVTGTILPIEEIG 160 (376)
T ss_pred ccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcC-CCCeEEEEECCCCCccccCCHHHHH
Confidence 8999999999999997654 3455579999999876677899999999996 6899999999999999999999999
Q ss_pred HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
++++. ++++|+|++++.....- .+...+-.+++.|++|.++.| -.+|.+++.++
T Consensus 161 ~l~~~~~~~livD~a~~~g~~~~----~~~~~~~D~~~~s~~K~l~~p-~g~g~l~~~~~ 215 (376)
T TIGR01977 161 ELAQENGIFFILDAAQTAGVIPI----DMTELAIDMLAFTGHKGLLGP-QGTGGLYIREG 215 (376)
T ss_pred HHHHHcCCEEEEEhhhccCccCC----CchhcCCCEEEecccccccCC-CCceEEEEcCC
Confidence 99987 99999999997543211 112234568999999976533 23677766443
No 163
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.85 E-value=1.2e-19 Score=175.10 Aligned_cols=199 Identities=14% Similarity=0.069 Sum_probs=154.1
Q ss_pred CCCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868 104 ENPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (334)
Q Consensus 104 ~~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y 180 (334)
..|...++.+++++......++.+.. -..++++.++++++.+. +.+++++|+++++..++..++++||+|+++++.|
T Consensus 15 pGP~~~~~~V~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~ 94 (401)
T PLN02409 15 PGPVNIPERVLRAMNRPNEDHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQ 94 (401)
T ss_pred CCCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCc
Confidence 44556778999998763222222221 24577778888889875 4678899999999999998999999999999988
Q ss_pred hhH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHH--HhC-CCeEEE
Q 019868 181 TMY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKI--LEM-PILVVL 252 (334)
Q Consensus 181 ~~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l--~~~-~~~lIv 252 (334)
..+ ...++..|++++.++.+.+..+|++++++++++ +++++|++++++||||.+++.+++.++ ++. ++++|+
T Consensus 95 ~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vv 174 (401)
T PLN02409 95 FSLLWIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLV 174 (401)
T ss_pred hhHHHHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEE
Confidence 654 466777899999999765567899999999974 378999999999999999999999999 876 999999
Q ss_pred ccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (334)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~ 307 (334)
|++++... ..-.+.+.+.++++.|.+|.++.| .++||++++++.++.+.+
T Consensus 175 D~v~s~g~----~~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~ 224 (401)
T PLN02409 175 DGVSSIGA----LDFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKT 224 (401)
T ss_pred EcccccCC----ccccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhc
Confidence 99987321 111122334558888889988643 479999999999888764
No 164
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.85 E-value=6.4e-20 Score=175.11 Aligned_cols=190 Identities=18% Similarity=0.171 Sum_probs=154.3
Q ss_pred CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCC
Q 019868 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKS 201 (334)
Q Consensus 126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~ 201 (334)
|+++...+|++++|+++|. ++.++++++++++..++.+++++||+|+++.+.|..... .+...|+++..++.+
T Consensus 37 ~~~p~~~~le~~la~l~g~--~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~- 113 (369)
T cd00614 37 IGNPTVDALEKKLAALEGG--EAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD- 113 (369)
T ss_pred CCChhHHHHHHHHHHHHCC--CCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC-
Confidence 4667789999999999985 467777888899999999999999999999999976543 344679998888743
Q ss_pred CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
|+++++++++ +++++|++.+|+||+|.+.+.+++.++++. ++++|+|++|...... ... ..+.++++.|
T Consensus 114 ----d~~~l~~~i~-~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~----~~g~Divv~S 183 (369)
T cd00614 114 ----DPEALEAAIK-PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPL----ELGADIVVHS 183 (369)
T ss_pred ----CHHHHHHhcC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-Chh----hhCCcEEEec
Confidence 5899999997 589999999999999999999999999987 9999999999754431 111 2345699999
Q ss_pred Cchhhcccc-cchheeEcCH-HHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 281 FSKRAGLAG-LRVGYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 281 ~SK~~gl~G-~R~G~l~~~~-~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
++|.++.+| .+.||+++++ ++++.+...... .+++++.++++...|+.
T Consensus 184 ~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 184 ATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred cceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCC
Confidence 999997665 7899999977 888888766543 56788888877777764
No 165
>PLN02483 serine palmitoyltransferase
Probab=99.85 E-value=8.9e-20 Score=179.83 Aligned_cols=223 Identities=20% Similarity=0.230 Sum_probs=159.0
Q ss_pred CCCeeecCCCCC-CCC-----CCHHHHHHHhcCcC---C--CCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 94 PEDIVKIDANEN-PYG-----PPPEVREALGQLKF---P--YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 94 ~~~~i~l~~~~~-~~~-----~~~~v~~al~~~~~---~--~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+.++|+.++. .+. +++.+.+++.+... . ..|+ .....+|++++|+++| .++.|++++|....+ .
T Consensus 99 ~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~an~-~ 176 (489)
T PLN02483 99 TRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYATNS-T 176 (489)
T ss_pred CceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHHHHH-H
Confidence 456788877532 343 23567777766321 1 2363 4568899999999999 466788888765544 6
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CC-----ceEEEEe-CCCC
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EK-----PKCIFLT-SPNN 229 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~-----~~~i~l~-~p~N 229 (334)
++.+++++||.|++++|+|..+...++..|++++.++.. |++++++.+++ ++ .++++++ ...|
T Consensus 177 ~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s 251 (489)
T PLN02483 177 IIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYS 251 (489)
T ss_pred HHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEEEEECCCCC
Confidence 677789999999999999999999999999999999853 44555554421 22 2556665 5579
Q ss_pred ccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCC---Cchhhh--cCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE---SRMEWV--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 230 PtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~---~~~~~~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
++|.+.+.+++.++++. ++++|+||+|.....+. ...... ...+.+++++||||.||++| ||+++++++++
T Consensus 252 ~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G---G~i~~~~~li~ 328 (489)
T PLN02483 252 MEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG---GYIAGSKELIQ 328 (489)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc---eEEEcCHHHHH
Confidence 99999999999999987 99999999997433221 111111 22467899999999999887 99999999999
Q ss_pred HHHHhcCC--C--CCcHHHHHHHHHHh
Q 019868 304 YLWRAKQP--Y--NVSVAAEVAACAAL 326 (334)
Q Consensus 304 ~l~~~~~~--~--~~~~~~q~aa~~~L 326 (334)
.+...... + ..++....++.++|
T Consensus 329 ~l~~~~~~~~~~~~~~p~~~~~~~aaL 355 (489)
T PLN02483 329 YLKRTCPAHLYATSMSPPAVQQVISAI 355 (489)
T ss_pred HHHHhCccccccCCcCHHHHHHHHHHH
Confidence 99876432 2 23433333445555
No 166
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.84 E-value=8.7e-20 Score=178.48 Aligned_cols=201 Identities=17% Similarity=0.196 Sum_probs=156.5
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcCcCCCCC-C-----CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQLKFPYIY-P-----DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~~~~~~Y-p-----~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
..+.++.|.+++..|..+.+++........| | ..| ..++++.+++++|++.+++++++|+++++..++.+
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a 148 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA 148 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH
Confidence 5678899999888887777666442221224 3 223 23455677888999988999999999999999888
Q ss_pred hc-CCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868 166 VL-DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (334)
Q Consensus 166 l~-~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (334)
+. .+||+|+++++.|+.+...++. .|++++.++.+++ .+|+++++++++ +++++|++++| ||||.+.+.+++
T Consensus 149 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~-~~t~~v~l~~p-n~tG~v~~l~~I 225 (447)
T PRK00451 149 VRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVD-DDTAAVVVQYP-NFFGVIEDLEEI 225 (447)
T ss_pred HHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcC-CCeEEEEEECC-CCCCeeCCHHHH
Confidence 74 7999999999999988876554 6999999997666 899999999997 68999999999 899999999999
Q ss_pred HHHHhC-CCeEEE--ccCCcCccCCCCchhhhcCCCcEEEEc---CCchhhcccccchheeEcCHHHHHHH
Q 019868 241 LKILEM-PILVVL--DEAYTEFSGLESRMEWVKKHDNLIVLR---TFSKRAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 241 ~~l~~~-~~~lIv--Deay~~~~~~~~~~~~~~~~~~~i~i~---S~SK~~gl~G~R~G~l~~~~~~i~~l 305 (334)
.++++. ++++++ |.+...+.. ...+.+.++++. +|||.|.+.|+|+||+++++++++.+
T Consensus 226 ~~~a~~~~~~~iv~~d~~~~g~~~------~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~ 290 (447)
T PRK00451 226 AEIAHAGGALFIVGVDPVSLGLLK------PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQM 290 (447)
T ss_pred HHHHHHCCCEEEEEcChHHhccCC------CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhC
Confidence 999988 888887 543221111 112334456655 78888888999999999999888873
No 167
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.84 E-value=1.2e-19 Score=171.40 Aligned_cols=194 Identities=11% Similarity=0.088 Sum_probs=150.7
Q ss_pred CCCCCHHHHHHHhcC-cCC-CCCCCcChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CC
Q 019868 106 PYGPPPEVREALGQL-KFP-YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TF 180 (334)
Q Consensus 106 ~~~~~~~v~~al~~~-~~~-~~Yp~~g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y 180 (334)
|..+++.+++++... ... ..|+ ....++|+.++++++++++ .|+++.|+++++..++..++.+||+|++..+ .|
T Consensus 7 p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~ 85 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWCHWDSEFN-DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAY 85 (355)
T ss_pred CCCCCHHHHHHhhhhccCCCHHHH-HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCch
Confidence 566778899998762 111 1233 3367899999999999765 5778999999999999999888888665554 55
Q ss_pred hh-HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868 181 TM-YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (334)
Q Consensus 181 ~~-~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~ 257 (334)
+. +...++..|.+++.++.++++.+|++++++.+++ .+.+++++++++||||...+.+++.++++. ++++|+|++++
T Consensus 86 ~~~~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s 165 (355)
T TIGR03301 86 GERLAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSS 165 (355)
T ss_pred hhHHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccc
Confidence 54 5667788999999999766788999999999863 356788888999999999999999999987 99999998765
Q ss_pred CccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHH
Q 019868 258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~ 306 (334)
.... + . .+...+..+++.|++|.+ |++| +||+++++++++.+.
T Consensus 166 ~g~~-~--~-~~~~~~~d~~~~s~~K~l~~~~G--~g~~~~~~~~~~~~~ 209 (355)
T TIGR03301 166 FGAI-P--I-DIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASA 209 (355)
T ss_pred cCCc-c--c-chhhcCccEEEecCCcccccCCc--eeEEEECHHHHHHhh
Confidence 3321 1 1 122345668999999976 5555 699999999988765
No 168
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.84 E-value=1.5e-19 Score=172.20 Aligned_cols=185 Identities=18% Similarity=0.144 Sum_probs=147.0
Q ss_pred CCHHHHHHHhcCcCCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCC---------------E
Q 019868 109 PPPEVREALGQLKFPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGD---------------K 172 (334)
Q Consensus 109 ~~~~v~~al~~~~~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd---------------~ 172 (334)
+|+++++++.+... ..+... -..++++.+++++|.+ ++++++|+++++..++.+++++|| +
T Consensus 25 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~e 101 (363)
T TIGR01437 25 VSDEVADAQKRGAQ-NYFEIKELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNE 101 (363)
T ss_pred CCHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccce
Confidence 67899999887422 112322 3567888888888864 799999999999999999999998 9
Q ss_pred EEEcCCCChhH----HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE-EeCCCCccccCCcHHHHHHHHhC-
Q 019868 173 IVDCPPTFTMY----EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF-LTSPNNPDGSIINDEDLLKILEM- 246 (334)
Q Consensus 173 Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~-l~~p~NPtG~~~~~~~l~~l~~~- 246 (334)
|+++.|.|..| ...+...|++++.++. ++.+|+++++++++ +++++++ +++|+||+|.+.+.+++.++++.
T Consensus 102 Vi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~-~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~ 178 (363)
T TIGR01437 102 VVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAIT-EKTAAILYIKSHHCVQKSMLSVEDAAQVAQEH 178 (363)
T ss_pred EEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcC-hhceEEEEEecCCCCcCCcCCHHHHHHHHHHc
Confidence 99999877765 4666778999999975 35799999999997 6788766 57899999999999999999997
Q ss_pred CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868 247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (334)
Q Consensus 247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~ 307 (334)
|+++|+|++|..- . ......+..+++.|++|.+ +|+|.|+++.+++.++.+..
T Consensus 179 gi~vivD~a~~~~-----~-~~~~~~g~D~~~~S~~K~l--~gp~~G~l~~~~~~i~~~~~ 231 (363)
T TIGR01437 179 NLPLIVDAAAEED-----L-QKYYRLGADLVIYSGAKAI--EGPTSGLVLGKKKYIEWVKL 231 (363)
T ss_pred CCeEEEECCCCCc-----h-HHHHHcCCCEEEEeCCccc--CCCceEEEEEcHHHHHHHHh
Confidence 9999999999721 1 1111123458889999965 68899999999888887654
No 169
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.84 E-value=5e-20 Score=178.00 Aligned_cols=234 Identities=19% Similarity=0.182 Sum_probs=163.0
Q ss_pred CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCCCCCc-----ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIYPDP-----ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Yp~~-----g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
.++.++||+..| ...++ .+|++.+++.+ +.....|+.. ...++.+.++++++.+.++|++++|+++++..+
T Consensus 33 ~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~a 112 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAA 112 (413)
T ss_pred CCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHH
Confidence 356789999876 55676 78889888765 4333445432 356899999999987788999999999999999
Q ss_pred HHHhc--CCCCEEEEcCCCChhHHHHHHHC-C------------CeEEEeeCCC------CCCCCHHHHHHhccc--CCc
Q 019868 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS------DFSLNVELIADAVER--EKP 219 (334)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-G------------~~v~~v~~~~------~~~~d~~~l~~~l~~--~~~ 219 (334)
++.+. .++++|++.+++|..+....... + .+++.+|.+. ++..|++.+++.+++ .++
T Consensus 113 l~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 192 (413)
T cd00610 113 LKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEV 192 (413)
T ss_pred HHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCE
Confidence 99764 67899999999998755443322 1 2345565431 244589999998874 245
Q ss_pred eEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhe
Q 019868 220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (334)
Q Consensus 220 ~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~ 294 (334)
++++++..+|++|..++ .+++.++++. ++++|+||+|.+|...+.... ....+...-+.||||.++. |+|+||
T Consensus 193 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~-~~~~~~~~d~~t~sK~l~~-g~~~g~ 270 (413)
T cd00610 193 AAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFA-FEHFGVEPDIVTLGKGLGG-GLPLGA 270 (413)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhh-HhhcCCCCCeEEEcccccC-ccccEE
Confidence 66666555777899875 4555555555 999999999998743222111 1111111124489999985 899999
Q ss_pred eEcCHHHHHHH--HHhc--CCCCCcHHHHHHHHHHhc
Q 019868 295 GAFPLSIIEYL--WRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 295 l~~~~~~i~~l--~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
+++++++++.+ .... ..++.+++++.++.++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~ 307 (413)
T cd00610 271 VLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLE 307 (413)
T ss_pred EEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99999999886 2222 236778888888877764
No 170
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=1.7e-19 Score=166.93 Aligned_cols=169 Identities=18% Similarity=0.135 Sum_probs=136.4
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC--C
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK--S 201 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~--~ 201 (334)
..+|..-..++++.+|+++|.+ +-+++++|+++++..++.+++++||+|+++.++|..+...+...|++++.++.+ .
T Consensus 54 l~~~~g~i~~~~~~~A~~~ga~-~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 54 LLDPTGPIKEAQELAARAFGAK-HTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-CEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCc
Confidence 3346666889999999999964 345559999999999999999999999999999998888888899999988743 2
Q ss_pred C----CCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCchhhhcCCCc
Q 019868 202 D----FSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDN 274 (334)
Q Consensus 202 ~----~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~~~~~~~~~~ 274 (334)
+ ..+|++++++++++ .+++++++++| |++|.+++.+++.++++. ++++|+||+|..+ .+.+.........+.
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~ 211 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA 211 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence 2 37899999999863 46899999999 789999999999999988 9999999999753 232222222234577
Q ss_pred EEEEcCCchhhcccccchheeE
Q 019868 275 LIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 275 ~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
++++.|++|. ++|+|.|+++
T Consensus 212 div~~S~hK~--l~g~~~~~~l 231 (294)
T cd00615 212 DIVVQSTHKT--LPALTQGSMI 231 (294)
T ss_pred cEEEEchhcc--cchHhHHHHH
Confidence 8999999996 4788876554
No 171
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.84 E-value=1.7e-19 Score=172.90 Aligned_cols=191 Identities=19% Similarity=0.193 Sum_probs=148.0
Q ss_pred CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCC
Q 019868 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKS 201 (334)
Q Consensus 125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~ 201 (334)
+|+++...+|++++|+++|. +++++++|+++++..++.+++++||+|+++.|.|..+...+ ...|+++..+.
T Consensus 49 r~~np~~~~lE~~lA~l~g~--~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~--- 123 (385)
T PRK08574 49 REENPTLRPLEEALAKLEGG--VDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY--- 123 (385)
T ss_pred CCCCccHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC---
Confidence 44677789999999999995 47788899999999999999999999999999999876655 34687777653
Q ss_pred CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
+|++++++++++.++++|++++|+||||.+++.+++.++++. ++++|+|++|...... ... ..+..+++.|
T Consensus 124 ---~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~-~~l----~~GaDivv~S 195 (385)
T PRK08574 124 ---PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY-RPL----RHGADFVVHS 195 (385)
T ss_pred ---CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-Chh----hhCCcEEEee
Confidence 368999999973389999999999999999999999999987 9999999999643211 111 2345699999
Q ss_pred Cchhhcccccch-heeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 281 FSKRAGLAGLRV-GYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 281 ~SK~~gl~G~R~-G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
++|.++.+|-++ |++++ ++++++.++..+.. ..++++..+.+...|+.
T Consensus 196 ~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t 247 (385)
T PRK08574 196 LTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT 247 (385)
T ss_pred CceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence 999987666654 65555 67888877655543 34666666666555553
No 172
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.84 E-value=4.7e-19 Score=171.00 Aligned_cols=224 Identities=21% Similarity=0.210 Sum_probs=160.6
Q ss_pred CCeeecCCC-CCCCCCCHHHHHHHhc-Cc-CCC-------CC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDAN-ENPYGPPPEVREALGQ-LK-FPY-------IY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~-~~~~~~~~~v~~al~~-~~-~~~-------~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++++|+.| ...+..+|++++++.+ +. ++. .| ..+...+|++++|+++|. ++.+++++| ++++..++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~-~~~l~~~sG-~~an~~ai 122 (402)
T TIGR01821 45 KDVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK-ESALVFTSG-YVANDATL 122 (402)
T ss_pred eeEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC-CeEEEECch-HHHHHHHH
Confidence 457888776 4578899999988765 22 211 12 223467899999999995 344555554 67777777
Q ss_pred HHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
..+.. +|+.|+.....|......+...|+++..++. .|++++++.++. .++++|++++|+||||.+.+.+
T Consensus 123 ~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~ 197 (402)
T TIGR01821 123 ATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-----NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIE 197 (402)
T ss_pred HHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-----CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHH
Confidence 76654 6777777666777666667778888766653 266677666642 3578999999999999999999
Q ss_pred HHHHHHhC-CCeEEEccCCcCccCCC--Cc-hhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868 239 DLLKILEM-PILVVLDEAYTEFSGLE--SR-MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (334)
Q Consensus 239 ~l~~l~~~-~~~lIvDeay~~~~~~~--~~-~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~- 312 (334)
++.++++. ++++|+||+|....+.+ .. ....+ ..+.+++++||||.||++| ||+++++++++.+.+....+
T Consensus 198 ~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~~~~~~~l~~~~~~~~ 274 (402)
T TIGR01821 198 EICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAIRSYAPGFI 274 (402)
T ss_pred HHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecCHHHHHHHHHhCcCce
Confidence 99999987 99999999998332211 11 11111 1234688999999999888 99999999999887665442
Q ss_pred ---CCcHHHHHHHHHHhcC
Q 019868 313 ---NVSVAAEVAACAALQN 328 (334)
Q Consensus 313 ---~~~~~~q~aa~~~L~~ 328 (334)
+.++.++.++.++|+.
T Consensus 275 ~t~~~~~~~~aaa~aaL~~ 293 (402)
T TIGR01821 275 FTTSLPPAIAAGATASIRH 293 (402)
T ss_pred ecCcCCHHHHHHHHHHHHH
Confidence 4677788888888764
No 173
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.83 E-value=2.5e-19 Score=172.66 Aligned_cols=207 Identities=19% Similarity=0.167 Sum_probs=151.3
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhc-C--cC------CCCC-CCcChHHHHH----HHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQ-L--KF------PYIY-PDPESRRLRA----ALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~------~~~Y-p~~g~~~lr~----~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
+.++|..+++.. ++.+++++.. + .+ ...| +..+...+++ .+++++|++..+|++++| ++++..
T Consensus 20 ~~~~~~~~~~~~--~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sg-t~a~~~ 96 (402)
T cd00378 20 ETLELIASENFT--SPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSG-SQANLA 96 (402)
T ss_pred hCeeeeccCCcC--CHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCc-HHHHHH
Confidence 458887777765 6889999875 2 11 1223 2334445555 466788987766766655 689999
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHH-----HHHCCCeEEEeeC--C-CCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPR--K-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~G~~v~~v~~--~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
++.+++++||+|++++|+|+.+... ++..|.++..++. + +++.+|++++++.+.+.++++|++++|+|| .
T Consensus 97 ~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~~~--~ 174 (402)
T cd00378 97 VYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASAYP--R 174 (402)
T ss_pred HHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcccC--C
Confidence 9999999999999999999866433 5557877766653 2 268999999999986568999999998876 5
Q ss_pred CCcHHHHHHHHhC-CCeEEEccCC-cCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcC
Q 019868 234 IINDEDLLKILEM-PILVVLDEAY-TEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQ 310 (334)
Q Consensus 234 ~~~~~~l~~l~~~-~~~lIvDeay-~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~ 310 (334)
..+.+++.++++. ++++|+|++| .++.+.+.....+. ...++++|+||.+ +|+|+||+++++ ++++.+.+...
T Consensus 175 ~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l--~G~~gg~i~~~~~~~~~~l~~~~~ 250 (402)
T cd00378 175 PIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL--RGPRGGLILTRKGELAKKINSAVF 250 (402)
T ss_pred CcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC--CCCCceEEEeccHHHHHHHHHHhC
Confidence 6689999999987 9999999996 44433221111112 2237899999975 799999999976 89998877665
Q ss_pred C
Q 019868 311 P 311 (334)
Q Consensus 311 ~ 311 (334)
+
T Consensus 251 ~ 251 (402)
T cd00378 251 P 251 (402)
T ss_pred c
Confidence 4
No 174
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.4e-19 Score=160.71 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=163.7
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc----C-------cCCCCCC-CcChHHHHHHHHHhc------CCCCCCEEEeCCHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ----L-------KFPYIYP-DPESRRLRAALAKDS------GLESDHILVGCGAD 156 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~----~-------~~~~~Yp-~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~ 156 (334)
...|.|+.|.+.. . |++.+.+++ + .....|. ..|...|.+++++.+ ++++.||.+|+|++
T Consensus 30 ~g~imLggGNPa~-i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQ 107 (417)
T COG3977 30 PGAIMLGGGNPAR-I-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQ 107 (417)
T ss_pred CCceeeCCCCccc-C-hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCcc
Confidence 3478888766533 2 444444332 1 1225674 457888888888765 57889999999999
Q ss_pred HHHHHHHHHhcC---CC--CEEEEc-CCCChhHHHHHHHCCCeEEEeeC-----CC---CCCCCHHHHHHhcccCCceEE
Q 019868 157 ELIDLIMRCVLD---PG--DKIVDC-PPTFTMYEFDAAVNGAAVVKVPR-----KS---DFSLNVELIADAVEREKPKCI 222 (334)
Q Consensus 157 ~~i~~~~~~l~~---~g--d~Vl~~-~p~y~~~~~~~~~~G~~v~~v~~-----~~---~~~~d~~~l~~~l~~~~~~~i 222 (334)
.+...++..|.. .| .+|+.| .|.|..|..+.-.-. -.+.+.. +. .+.+|.+++.- .+.+.+|
T Consensus 108 s~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vDF~~l~i---~e~~g~i 183 (417)
T COG3977 108 SAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVDFEHLHI---GESTGAI 183 (417)
T ss_pred chHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccCHHHccc---ccccceE
Confidence 999999987753 24 356555 688887765422111 1222221 11 24567777653 2678999
Q ss_pred EEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhcccccchheeE
Q 019868 223 FLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
+++.|.||||.+++.+|+.+|... ++.+|+|.+|..-... -.... .--.+|++.|.|+|| .|+||.|+|.++
T Consensus 184 c~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~-iifsd~~~~w~~NiilC~SLSK-~GLPG~R~GIiI 261 (417)
T COG3977 184 CVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPG-IIFSDATPLWNENIILCMSLSK-LGLPGSRCGIII 261 (417)
T ss_pred EecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCc-eecccccccCCCCEEEEeehhh-cCCCCcceeEEE
Confidence 999999999999999999998765 9999999999742211 00000 112589999999999 799999999999
Q ss_pred cCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcCchhhc
Q 019868 297 FPLSIIEYLWRAKQP--YNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 297 ~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
+++++++.+...... ..++.++++++..+++..+.++
T Consensus 262 ane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~r 300 (417)
T COG3977 262 ANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLR 300 (417)
T ss_pred ccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHH
Confidence 999999999888776 4577889999999998876643
No 175
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.6e-20 Score=169.39 Aligned_cols=200 Identities=19% Similarity=0.313 Sum_probs=158.0
Q ss_pred CCCC-CcChHHHHHHHHHhc----C--CCCCCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEE
Q 019868 124 YIYP-DPESRRLRAALAKDS----G--LESDHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVV 195 (334)
Q Consensus 124 ~~Yp-~~g~~~lr~~lA~~~----~--~~~~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~ 195 (334)
-.|. +.|.+-+|+.+|++. | .+|++|++|.|++.++..++..++ .+.+.|++|-|.|+.|...+..+|+..+
T Consensus 107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~~~v 186 (475)
T KOG0258|consen 107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGGTQV 186 (475)
T ss_pred cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCCccc
Confidence 4474 568999999999997 3 578899999999999999999876 5779999999999999999988888877
Q ss_pred Eee--CCCCCCCCHHHHHHhccc----CCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC-C
Q 019868 196 KVP--RKSDFSLNVELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE-S 264 (334)
Q Consensus 196 ~v~--~~~~~~~d~~~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~-~ 264 (334)
.+- .+.+|.+|.+++++.+++ -+++++++.||.||||++++++-+++|++. +++++.||+|++-.+.. +
T Consensus 187 ~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~s 266 (475)
T KOG0258|consen 187 PYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGS 266 (475)
T ss_pred ceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCc
Confidence 654 457899999999987643 468999999999999999999999999875 89999999999877643 2
Q ss_pred chhh-------hc----CCCcEEEEcCCchhh-cccccchheeEc---CHHHHHHHHHhcCC-CCCcHHHHHHHH
Q 019868 265 RMEW-------VK----KHDNLIVLRTFSKRA-GLAGLRVGYGAF---PLSIIEYLWRAKQP-YNVSVAAEVAAC 323 (334)
Q Consensus 265 ~~~~-------~~----~~~~~i~i~S~SK~~-gl~G~R~G~l~~---~~~~i~~l~~~~~~-~~~~~~~q~aa~ 323 (334)
.... +. +.-.++.++|.||.+ |=.|.|-||+-+ ++++.+.+.+.... .+.++.+|...-
T Consensus 267 kFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vd 341 (475)
T KOG0258|consen 267 KFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVD 341 (475)
T ss_pred chHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhc
Confidence 2211 11 122467789999986 678999999965 67777766665443 455555555443
No 176
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.83 E-value=1e-18 Score=168.84 Aligned_cols=223 Identities=18% Similarity=0.181 Sum_probs=159.8
Q ss_pred CCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CC-------CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDANE-NPYGPPPEVREALGQ-LK-FP-------YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~-------~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++++|+.++ ..++++|++++++.+ +. .+ ..| +.+...+|++++|++++. ++.+++++|. ++...++
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~-~~~~~~~sG~-~an~~ai 123 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGK-EAALVFTSGY-VSNDATL 123 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCC-CcEEEECcHH-HHHHHHH
Confidence 5689997764 578889999988865 21 11 123 344578899999999994 5566667765 4555555
Q ss_pred HHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHH
Q 019868 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
..+.. +++.|+.....|......+...|+++..++. .|++++++.++. +++++|++++++||+|.+.+.+
T Consensus 124 ~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~ 198 (407)
T PRK09064 124 STLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-----NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIA 198 (407)
T ss_pred HHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-----CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHH
Confidence 65543 7777766666676666666777887766653 267777776642 4678999999999999999999
Q ss_pred HHHHHHhC-CCeEEEccCCcC--ccCCCCch-hhhcC-CCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC-
Q 019868 239 DLLKILEM-PILVVLDEAYTE--FSGLESRM-EWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY- 312 (334)
Q Consensus 239 ~l~~l~~~-~~~lIvDeay~~--~~~~~~~~-~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~- 312 (334)
++.++++. ++++|+||+|.. +...+... ...+. .+.+++++||||.||++| ||+++++++++.+.+...++
T Consensus 199 ~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~~~~~~~l~~~~~~~~ 275 (407)
T PRK09064 199 EICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGSAALVDAVRSYAPGFI 275 (407)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecCHHHHHHHHHhCcccc
Confidence 99999987 999999999973 22222111 11111 234789999999999888 99999999999887665442
Q ss_pred ---CCcHHHHHHHHHHhc
Q 019868 313 ---NVSVAAEVAACAALQ 327 (334)
Q Consensus 313 ---~~~~~~q~aa~~~L~ 327 (334)
+.++.++.++.++|+
T Consensus 276 ~t~~~~~~~~~aa~~al~ 293 (407)
T PRK09064 276 FTTSLPPAIAAAALASIR 293 (407)
T ss_pred ccCcCCHHHHHHHHHHHH
Confidence 456677777777664
No 177
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=6.9e-19 Score=168.48 Aligned_cols=211 Identities=16% Similarity=0.111 Sum_probs=157.9
Q ss_pred CCCCCCHHHHHHHhc-CcCCCCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868 105 NPYGPPPEVREALGQ-LKFPYIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (334)
Q Consensus 105 ~~~~~~~~v~~al~~-~~~~~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y 180 (334)
..++.++++.++... ....+.|. .++...|++++|++.+. +++++++|+++++..++.+++++||+|++++|.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~--~~~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y 110 (394)
T PRK09028 33 VVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGG--AGTALYPSGAAAISNALLSFLKAGDHLLMVDSCY 110 (394)
T ss_pred cccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEECCCc
Confidence 345555666665543 22224453 44567999999999864 4799999999999999999999999999999999
Q ss_pred hhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868 181 TMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (334)
Q Consensus 181 ~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea 255 (334)
..+...+ ...|+++..++.. |.+.++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++
T Consensus 111 ~~t~~l~~~~l~~~Gi~v~~v~~~-----~~e~l~~~l~-~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t 184 (394)
T PRK09028 111 EPTRDLCDKILKGFGIETTYYDPM-----IGEGIRELIR-PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNT 184 (394)
T ss_pred HHHHHHHHHhhhhcceEEEEECCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 7766433 4478888877532 4578888886 689999999999999999999999999987 999999999
Q ss_pred CcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
|.....- .+ .+.+-+++++|.+|.+ |..+...|+++.+++.++.+...... .++++...+.+...|+.
T Consensus 185 ~a~p~~~-~P----l~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T 255 (394)
T PRK09028 185 WASPINS-RP----FEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRT 255 (394)
T ss_pred ccccccC-Cc----cccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc
Confidence 9743211 11 1345679999999987 54567789888788877766644332 35677766666655553
No 178
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=7.8e-19 Score=168.57 Aligned_cols=204 Identities=22% Similarity=0.231 Sum_probs=166.5
Q ss_pred CCCeeecCCCCCCCCCCHHHHHHHhcC-----cCCC--CCCCc-----ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHH
Q 019868 94 PEDIVKIDANENPYGPPPEVREALGQL-----KFPY--IYPDP-----ESRRLRAALAKDSGLES-DHILVGCGADELID 160 (334)
Q Consensus 94 ~~~~i~l~~~~~~~~~~~~v~~al~~~-----~~~~--~Yp~~-----g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~ 160 (334)
+.+++.|+...... .|..+.+++.+. ...+ .|+.. ..++.|+.+|++++.++ ++|++|.|+|++|+
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln 98 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALN 98 (405)
T ss_pred CCCeEEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHH
Confidence 45678888877665 567788777642 1111 12211 25689999999999985 89999999999999
Q ss_pred HHHHHh---cCCCCEEEEcCCCCh----hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 161 LIMRCV---LDPGDKIVDCPPTFT----MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 161 ~~~~~l---~~~gd~Vl~~~p~y~----~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
++..++ ..+||+|++.+-.|+ ++...++..|++++.+|.++++.+|++.++..++ +++|+|.+++.+|.||.
T Consensus 99 ~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~vSn~tG~ 177 (405)
T COG0520 99 LVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSHVSNVTGT 177 (405)
T ss_pred HHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcC-CCceEEEEECccccccc
Confidence 999998 689999999999886 5566777789999999977888999999999887 78999999999999999
Q ss_pred CCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch-hhcccccchheeEcCHHHHHHH
Q 019868 234 IINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK-RAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK-~~gl~G~R~G~l~~~~~~i~~l 305 (334)
+.|.+++.++++. ++++++|.+++- +...-.+...+.++++.|..| .+|..| +|.+++.+++.+.+
T Consensus 178 ~~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~Df~afsgHKwl~gP~G--iGvLy~r~~~l~~l 245 (405)
T COG0520 178 VNPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCDFLAFSGHKWLLGPTG--IGVLYVRKELLEEL 245 (405)
T ss_pred cchHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCCEEEEcccccccCCCc--eEEEEEchHHHhhc
Confidence 9999999999998 999999999863 222223345567799999999 566445 89999999999877
No 179
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.82 E-value=4.9e-19 Score=170.87 Aligned_cols=197 Identities=19% Similarity=0.172 Sum_probs=150.2
Q ss_pred eecCCCCCCCCCCHHHHHHHhc-Cc--C--CCCC-C------CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 98 VKIDANENPYGPPPEVREALGQ-LK--F--PYIY-P------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~--~--~~~Y-p------~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
+.|+.+... +.++.+.+++.. +. . .... . ....+++|+.+++++|+++++|++++|+++++..++..
T Consensus 5 ~yld~aa~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 5 IYLDYAATT-PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESNNLAIKG 83 (402)
T ss_pred EEeeCCcCC-CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHH
Confidence 667665543 556788888754 21 1 1110 0 11255789999999999999999999999999998876
Q ss_pred hc----CCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH
Q 019868 166 VL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 166 l~----~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
+. ++||+|+++.+.|+.+...+ +..|++++.++.++++.+|++.+++.++ +++++|++++++||||.+.+.+
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~lv~v~~~~n~tG~~~~~~ 162 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSNGLIDLEELKAAIR-DDTILVSIMHVNNEIGVIQDIA 162 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECCCcCceecccHH
Confidence 53 68999999999998755443 4469999999977778899999999997 5789999999999999999999
Q ss_pred HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 239 DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 239 ~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
++.++++. ++++++|++++.... + -.+....-.+++.|..|.+|.+| +|+++++++..
T Consensus 163 ~I~~l~~~~g~~livD~a~a~g~~-~---~~~~~~~~D~~~~s~~K~~gp~G--~G~l~~~~~~~ 221 (402)
T TIGR02006 163 AIGEICRERKVFFHVDAAQSVGKI-P---INVNELKVDLMSISGHKIYGPKG--IGALYVRRKPR 221 (402)
T ss_pred HHHHHHHHcCCEEEEEcchhcCCc-c---cCccccCCCEEEEehhhhcCCCc--eEEEEEccCCC
Confidence 99999987 999999999864321 1 11123344588899999777446 89988875433
No 180
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=5.3e-19 Score=169.83 Aligned_cols=174 Identities=16% Similarity=0.216 Sum_probs=137.2
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-H---HHHHHHCCCeEEEeeCCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-Y---EFDAAVNGAAVVKVPRKSDF 203 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-~---~~~~~~~G~~v~~v~~~~~~ 203 (334)
++...+|++.+|+++|.+ +.+++++| +.++..++. ++++||+|++++|.|+. | ...++..|++++.++..
T Consensus 53 ~p~~~~le~~lA~l~g~~-~~v~~~sG-~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~--- 126 (390)
T PRK08064 53 NPTREALEDIIAELEGGT-KGFAFASG-MAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT--- 126 (390)
T ss_pred ChhHHHHHHHHHHHhCCC-CeEEECCH-HHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC---
Confidence 455789999999999976 56777666 567887776 78999999999999973 3 24455689999998752
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..+.... .. ..+.+++++|++
T Consensus 127 --d~~~l~~~l~-~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~-~~----~~g~Divv~S~t 198 (390)
T PRK08064 127 --NLEEVAQNIK-PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQK-PL----DLGADVVLHSAT 198 (390)
T ss_pred --CHHHHHHhcC-CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccC-ch----hhCCcEEEeecc
Confidence 7899999997 689999999999999999999999999987 99999999998654221 11 234569999999
Q ss_pred hhhc-ccccchheeEc-CHHHHHHHHHhcCCCCCc
Q 019868 283 KRAG-LAGLRVGYGAF-PLSIIEYLWRAKQPYNVS 315 (334)
Q Consensus 283 K~~g-l~G~R~G~l~~-~~~~i~~l~~~~~~~~~~ 315 (334)
|.++ ..|...|++++ ++++++.+...+..++..
T Consensus 199 K~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~ 233 (390)
T PRK08064 199 KFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAV 233 (390)
T ss_pred eeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 9875 33455677766 568889888887766543
No 181
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.82 E-value=3.9e-19 Score=170.36 Aligned_cols=212 Identities=17% Similarity=0.157 Sum_probs=150.9
Q ss_pred CCHHHHHHHhc-CcC-------CCCCCCcChHHHHHHHHHhc---CC-CCCCEEEeCCHHHHHHHHHHHhc-----CC-C
Q 019868 109 PPPEVREALGQ-LKF-------PYIYPDPESRRLRAALAKDS---GL-ESDHILVGCGADELIDLIMRCVL-----DP-G 170 (334)
Q Consensus 109 ~~~~v~~al~~-~~~-------~~~Yp~~g~~~lr~~lA~~~---~~-~~~~I~~t~G~~~~i~~~~~~l~-----~~-g 170 (334)
+++.+++++.+ ... .+.|+..+...+++++++++ +. ++++|++|+|+++++..+++++. ++ +
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~ 90 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGK 90 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCC
Confidence 45678877754 211 12344444566777766654 54 67899999999999999998752 45 4
Q ss_pred CEEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-
Q 019868 171 DKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM- 246 (334)
Q Consensus 171 d~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~- 246 (334)
++|+++...|+.+... ++..|++++.++.++++.+|++.+++.++ ++++++++++|+||||.+++.+++.++++.
T Consensus 91 ~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~ 169 (382)
T TIGR03403 91 NHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAIT-EKTALVSVMWANNETGMIFPIKEIGEICKER 169 (382)
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCCCHHHHHHhcc-cCCeEEEEEcccCCCccccCHHHHHHHHHHc
Confidence 7899998777765543 45689999999977778899999999997 678999999999999999999999999987
Q ss_pred CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH--HHH-----HHhcCCCCCcHHHH
Q 019868 247 PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII--EYL-----WRAKQPYNVSVAAE 319 (334)
Q Consensus 247 ~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i--~~l-----~~~~~~~~~~~~~q 319 (334)
++++++|+++..... ... +...+-.+++.|++|.+|.+| +|++++.++.. ..+ ......++++.+++
T Consensus 170 g~~~ivD~a~~~g~~---~~~-~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~ 243 (382)
T TIGR03403 170 GVLFHTDAVQAIGKI---PVD-VQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYI 243 (382)
T ss_pred CCEEEEechhhcCCC---ccC-ccccCCCEEEEcchhhCCCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHH
Confidence 999999999763221 111 122334589999999877777 57777643321 001 01112356787887
Q ss_pred HHHHHHhc
Q 019868 320 VAACAALQ 327 (334)
Q Consensus 320 ~aa~~~L~ 327 (334)
.++..+++
T Consensus 244 ~al~~al~ 251 (382)
T TIGR03403 244 VAMGEAMR 251 (382)
T ss_pred HHHHHHHH
Confidence 66666664
No 182
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=4e-19 Score=170.72 Aligned_cols=229 Identities=18% Similarity=0.277 Sum_probs=162.5
Q ss_pred CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+++.++|+..| ...++ ..|++.+++.+ +.. ...|..+...++.+.+++..+ .+++++++|+++++..++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~~~al 105 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENSF--ADKVFFTNSGAEAVECAI 105 (389)
T ss_pred CCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhCC--CCEEEEcCCcHHHHHHHH
Confidence 456778998765 22333 46888887765 322 122333445678888887764 468999999999999998
Q ss_pred HHh----cCCCC----EEEEcCCCChhHHHHHHHCCCeEEEe----eCCCCCC----CCHHHHHHhcccCCceEEEEeCC
Q 019868 164 RCV----LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 164 ~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v----~~~~~~~----~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
+.. .++|| +|++.++.|..+...+...+...... +..+++. .|++.+++.++ +++++|+++.+
T Consensus 106 ~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~avivep~ 184 (389)
T PRK01278 106 KTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAIT-PNTAAILIEPI 184 (389)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhC-CCeEEEEEecc
Confidence 865 35666 89999999998776665544432221 1112222 58999999997 58999999988
Q ss_pred CCccc-cCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 228 NNPDG-SIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 228 ~NPtG-~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+||+| .+++.+.+++|.+. ++++|+||+|.+|...+.... ....... +.+|||.++ +|+|+||++++++
T Consensus 185 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~ 260 (389)
T PRK01278 185 QGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD---IMAVAKGIG-GGFPLGACLATEE 260 (389)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCC---EEEEehhcc-CCcceEEEEEcHH
Confidence 89999 67788888887764 999999999998765332211 1111111 348999998 8999999999999
Q ss_pred HHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 301 IIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 301 ~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
+++.+...... ++.++++|+++.++|+
T Consensus 261 ~~~~~~~~~~~~t~~~~~~~~aaa~a~l~ 289 (389)
T PRK01278 261 AAKGMTPGTHGSTYGGNPLAMAVGNAVLD 289 (389)
T ss_pred HHhccCCCCCCCCCCccHHHHHHHHHHHH
Confidence 98877654433 6789999999977775
No 183
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=7.4e-19 Score=170.31 Aligned_cols=208 Identities=18% Similarity=0.121 Sum_probs=150.3
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c--CCCCCC------Cc-ChHH----HHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K--FPYIYP------DP-ESRR----LRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~--~~~~Yp------~~-g~~~----lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
++.++|..++++ +++.+++++... . +..+++ .. .... .|+.+++++|.+.++|++++| ++++.
T Consensus 25 ~~~~~l~~~~n~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~~sg-t~al~ 101 (416)
T PRK00011 25 EEHIELIASENF--VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQPHSG-SQANA 101 (416)
T ss_pred hcCeeeecccCc--CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeecCCc-hHHHH
Confidence 567999999998 578899887652 1 111111 11 1222 355789999998777777766 56888
Q ss_pred HHHHHhcCCCCEEEEcCCCChhHHH-----HHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 161 LIMRCVLDPGDKIVDCPPTFTMYEF-----DAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~~~~~-----~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
.++.+++++||+|+++.|+|..+.. .....|++++.++.+ +++.+|++++++.+++.++++|++++++| |..
T Consensus 102 ~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~~~--~~~ 179 (416)
T PRK00011 102 AVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGASAY--SRP 179 (416)
T ss_pred HHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCCcC--CCc
Confidence 9999999999999999999975432 122346788888754 45789999999999745789999876655 466
Q ss_pred CcHHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-HHHHHHHHHhcCC
Q 019868 235 INDEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQP 311 (334)
Q Consensus 235 ~~~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l~~~~~~ 311 (334)
.+.+++.++++. ++++|+|++|.. +...+.....+. ...++++|+||.+ +|+|.||++++ +++++.+.+...+
T Consensus 180 ~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l--~g~~gg~i~~~~~~~~~~l~~~~~~ 255 (416)
T PRK00011 180 IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL--RGPRGGLILTNDEELAKKINSAVFP 255 (416)
T ss_pred cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC--CCCCceEEEeCCHHHHHHHHHHhCc
Confidence 789999999987 999999999753 222111111111 2358899999965 78999999995 6899988877665
No 184
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.81 E-value=1e-18 Score=165.62 Aligned_cols=165 Identities=19% Similarity=0.173 Sum_probs=133.7
Q ss_pred hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC----CC-CEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCC
Q 019868 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PG-DKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~----~g-d~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~ 202 (334)
..++|+.+++++++++++|++++|+++++..++..+.. +| +.|++....|+.+.. .++..|++++.++.+++
T Consensus 44 ~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~ 123 (353)
T TIGR03235 44 VERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES 123 (353)
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC
Confidence 45899999999999999999999999999999887753 55 788888877775543 34457999999997777
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
+.+|++++++.++ +++++|++++++||||.+.+.+++.++++. ++++|+|+++....... .+...+-.+++.|.
T Consensus 124 ~~~d~~~l~~~l~-~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~----~~~~~~~D~~~~s~ 198 (353)
T TIGR03235 124 GRIDVDELADAIR-PDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITV----DLSADRIDLISCSG 198 (353)
T ss_pred CcCCHHHHHHhCC-CCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccc----cccccCCCEEEeeh
Confidence 8899999999997 578999999999999999999999999987 99999999976432211 11233456888899
Q ss_pred chhhcccccchheeEcCHHHH
Q 019868 282 SKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~~~~~i 302 (334)
+|.+|.+| +|+++++++.+
T Consensus 199 ~K~~gp~g--~g~l~~~~~~~ 217 (353)
T TIGR03235 199 HKIYGPKG--IGALVIRKRGK 217 (353)
T ss_pred hhcCCCCc--eEEEEEccCcc
Confidence 99776555 89999887654
No 185
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.81 E-value=9.2e-19 Score=156.08 Aligned_cols=247 Identities=19% Similarity=0.223 Sum_probs=177.1
Q ss_pred HHHHhCCCCCC-eeecCCCCC--CCCC---CHHHHHHHhcC----cCCCCC-CCcChHHHHHHHHHhc-C-----CCCCC
Q 019868 86 LSIQLGRKPED-IVKIDANEN--PYGP---PPEVREALGQL----KFPYIY-PDPESRRLRAALAKDS-G-----LESDH 148 (334)
Q Consensus 86 ~~~~~~~~~~~-~i~l~~~~~--~~~~---~~~v~~al~~~----~~~~~Y-p~~g~~~lr~~lA~~~-~-----~~~~~ 148 (334)
+.+.++.+..+ .++|++|.. +-+. -|.|+++-..+ ...+.| |-.|.+.++.+.++.+ | +..++
T Consensus 20 ~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg~~s~a~kE~R 99 (410)
T KOG1412|consen 20 LNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLGADSPAIKEDR 99 (410)
T ss_pred hHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcCCCchhhhhcc
Confidence 55567666544 589988843 2222 25555554432 345778 8889999999998875 3 22333
Q ss_pred -----EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCC-eEEEee--CCCCCCCCHHHHHHhcccCCce
Q 019868 149 -----ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA-AVVKVP--RKSDFSLNVELIADAVEREKPK 220 (334)
Q Consensus 149 -----I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~-~v~~v~--~~~~~~~d~~~l~~~l~~~~~~ 220 (334)
-+-++|+...-.-++..+++ ...|.+..|+|..+...+...|. ++..++ ..++-++|++.+...++....+
T Consensus 100 v~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~ 178 (410)
T KOG1412|consen 100 VFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEG 178 (410)
T ss_pred ccceeeccccchhhhhHHHHHHhcc-cceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCC
Confidence 34455555555555555565 46799999999999999999994 455555 3455689999999998755556
Q ss_pred EEEEe-C-CCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc------hhhhcCCCcEEEEcCCchhhccc
Q 019868 221 CIFLT-S-PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESR------MEWVKKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 221 ~i~l~-~-p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~------~~~~~~~~~~i~i~S~SK~~gl~ 288 (334)
.|++. . .|||||...+.|+|.+|++. +++.+.|-+|++|+.+... ...+.....++++.||+|+||++
T Consensus 179 si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlY 258 (410)
T KOG1412|consen 179 SIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLY 258 (410)
T ss_pred cEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccc
Confidence 55555 3 39999999999999999985 8999999999999864321 12344556799999999999999
Q ss_pred ccchheeEc---CHHHHHHHH----Hhc--CCCCCcHHHHHHHHHHhcCchhhc
Q 019868 289 GLRVGYGAF---PLSIIEYLW----RAK--QPYNVSVAAEVAACAALQNPIYLE 333 (334)
Q Consensus 289 G~R~G~l~~---~~~~i~~l~----~~~--~~~~~~~~~q~aa~~~L~~~~~~~ 333 (334)
|.|+|-+.+ ++..+..+. .+. ...+++..+..++..+|+.+++.+
T Consensus 259 neRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre 312 (410)
T KOG1412|consen 259 NERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELRE 312 (410)
T ss_pred cccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHH
Confidence 999998854 555554332 222 236788999999999999987754
No 186
>PRK14012 cysteine desulfurase; Provisional
Probab=99.81 E-value=7.9e-19 Score=169.54 Aligned_cols=196 Identities=17% Similarity=0.145 Sum_probs=149.3
Q ss_pred eecCCCCCCCCCCHHHHHHHhc-CcCCCCC--C-----------CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 98 VKIDANENPYGPPPEVREALGQ-LKFPYIY--P-----------DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~~~~~~Y--p-----------~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
|.|+.+... ++++.+.+++.+ +.....| + .....++|+.+|+++|+++++|++++|+++++..++
T Consensus 5 iyld~a~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l 83 (404)
T PRK14012 5 IYLDYSATT-PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATESDNLAI 83 (404)
T ss_pred EEecCcCCC-CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHH
Confidence 666665543 566778887754 2100011 1 012457899999999999899999999999999988
Q ss_pred HHhc----CCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 164 RCVL----DPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 164 ~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
.++. ++||+|+++.++|+.+...+ +..|++++.++.++++.+|+++++++++ +++++|++++++||||.+.+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~g~~d~~~l~~~i~-~~t~lv~~~~~~n~tG~~~~ 162 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSNGIIDLEKLEAAMR-DDTILVSIMHVNNEIGVIQD 162 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCCCcCCHHHHHHhcC-CCCEEEEEECcCCCccchhh
Confidence 7664 78999999999998765443 3469999999877778899999999997 68999999999999999999
Q ss_pred HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 237 DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 237 ~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
.+++.++++. ++++|+|+++...... . .+...+-.+++.|++|.+| ++ ++|+++++++.
T Consensus 163 ~~~I~~la~~~g~~vivD~a~~~g~~~---~-~~~~~~~D~~~~s~~K~~g-p~-g~G~l~~~~~~ 222 (404)
T PRK14012 163 IAAIGEICRERGIIFHVDAAQSVGKVP---I-DLSKLKVDLMSFSAHKIYG-PK-GIGALYVRRKP 222 (404)
T ss_pred HHHHHHHHHHcCCEEEEEcchhcCCcc---c-CcccCCCCEEEEehhhccC-CC-ceEEEEEecCC
Confidence 9999999987 9999999998642211 1 1112234578889999776 43 68999887653
No 187
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.81 E-value=4.6e-19 Score=159.95 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=179.7
Q ss_pred cHHHHHHHhCCCC-CCeeecCCCCC--CCCC---CHHHHHHHhcC---cCCCCC-CCcChHHHHHHHHHhc-C-----CC
Q 019868 82 PFEVLSIQLGRKP-EDIVKIDANEN--PYGP---PPEVREALGQL---KFPYIY-PDPESRRLRAALAKDS-G-----LE 145 (334)
Q Consensus 82 ~~~~~~~~~~~~~-~~~i~l~~~~~--~~~~---~~~v~~al~~~---~~~~~Y-p~~g~~~lr~~lA~~~-~-----~~ 145 (334)
++....+.+..++ ...|+|++|.. +.+. -+.|++|-+.+ .....| |..|.+++.+..+++. | +.
T Consensus 38 pILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~ik 117 (427)
T KOG1411|consen 38 PILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVIK 117 (427)
T ss_pred CcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhhh
Confidence 3434455555544 44699999843 2333 37777776642 233578 8889999999999985 3 22
Q ss_pred CCCEEE-----eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee--CCCCCCCCHHHHHHhcccCC
Q 019868 146 SDHILV-----GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP--RKSDFSLNVELIADAVEREK 218 (334)
Q Consensus 146 ~~~I~~-----t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~--~~~~~~~d~~~l~~~l~~~~ 218 (334)
.++|+. ++|+-..-..++..+ -++..|.+|+|+|+++......+|+.+..+. .....++|.+.+.+.+.+..
T Consensus 118 ~~Ri~tvQ~lSGTGaLriga~Fl~~f-~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p 196 (427)
T KOG1411|consen 118 EKRIVTVQTLSGTGALRVGAEFLARF-YPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAP 196 (427)
T ss_pred ccceeEEEeccCcchhhHHHHHHHhh-ccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCC
Confidence 333433 444444434444433 4689999999999999999999999988777 34567899999888886544
Q ss_pred ceEEEEeC--CCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCC------CchhhhcCCCcEEEEcCCchhhc
Q 019868 219 PKCIFLTS--PNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLE------SRMEWVKKHDNLIVLRTFSKRAG 286 (334)
Q Consensus 219 ~~~i~l~~--p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~------~~~~~~~~~~~~i~i~S~SK~~g 286 (334)
...++|.+ .|||||...+.++|++|.+. +.+.+.|.+|++|..+. .....+.+..+++++.||.|++|
T Consensus 197 ~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMG 276 (427)
T KOG1411|consen 197 EGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMG 276 (427)
T ss_pred CCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcc
Confidence 45566654 49999999999999999885 89999999999998532 12334556788999999999999
Q ss_pred ccccchheeEc---CHHHHH----HHHHhcCC--CCCcHHHHHHHHHHhcCchhh
Q 019868 287 LAGLRVGYGAF---PLSIIE----YLWRAKQP--YNVSVAAEVAACAALQNPIYL 332 (334)
Q Consensus 287 l~G~R~G~l~~---~~~~i~----~l~~~~~~--~~~~~~~q~aa~~~L~~~~~~ 332 (334)
+.|.|+|.+.+ +++... .++.+..+ .+++.-+..++..+|+|++..
T Consensus 277 LYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~ 331 (427)
T KOG1411|consen 277 LYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLK 331 (427)
T ss_pred hhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHH
Confidence 99999998843 334333 34444444 467788899999999997544
No 188
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.81 E-value=1e-18 Score=146.99 Aligned_cols=165 Identities=16% Similarity=0.148 Sum_probs=134.1
Q ss_pred hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH-HHHHHCCCeEEEeeCCCCCCCCH--
Q 019868 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGAAVVKVPRKSDFSLNV-- 207 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~G~~v~~v~~~~~~~~d~-- 207 (334)
..++++.++++++.+.+++++++|+++++..++.++.+++++|+++++.|.... ..+...|++++.++.+++...+.
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccchhh
Confidence 368999999999777889999999999999999999888999999999998877 77888999999998654433333
Q ss_pred HHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868 208 ELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (334)
Q Consensus 208 ~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (334)
+.+++.....+++++++++++||+|...+.+++.++++. ++++|+|++|..+...... ......+.++++.|++|.|+
T Consensus 82 ~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~~~~~d~~~~s~~K~~~ 160 (170)
T cd01494 82 AILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG-VLIPEGGADVVTFSLHKNLG 160 (170)
T ss_pred hhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc-cccccccCCEEEEEcccccC
Confidence 356555544688999999999999999999999999987 9999999999987753321 11223456799999999987
Q ss_pred ccccchheeEcC
Q 019868 287 LAGLRVGYGAFP 298 (334)
Q Consensus 287 l~G~R~G~l~~~ 298 (334)
. .|+|+++++
T Consensus 161 ~--~~~G~l~~~ 170 (170)
T cd01494 161 G--EGGGVVIVK 170 (170)
T ss_pred C--CceEEEEeC
Confidence 3 789998763
No 189
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.2e-18 Score=169.00 Aligned_cols=158 Identities=20% Similarity=0.246 Sum_probs=132.5
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~ 202 (334)
+++....|++.+|++.|. ++.++++|+++++..++..++++||+|+++.+.|+. +...++..|++++.++.
T Consensus 62 ~~p~~~~Le~~lA~leg~--~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~--- 136 (431)
T PRK08248 62 MNPTTDVFEKRIAALEGG--IGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP--- 136 (431)
T ss_pred CCchHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC---
Confidence 566678999999999984 477888888999999998899999999999998864 33455678999999974
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..... ..+ + ..+.+++++|+
T Consensus 137 --~d~e~l~~ai~-~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~-~~p---l-~~gaDivv~S~ 208 (431)
T PRK08248 137 --SDPENFEAAIT-DKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYL-LRP---I-EHGADIVVHSA 208 (431)
T ss_pred --CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCcccc-CCh---h-HcCCCEEEEcC
Confidence 37899999997 589999999999999999999999999987 999999999862111 111 1 34667999999
Q ss_pred chhhcccccchheeEc
Q 019868 282 SKRAGLAGLRVGYGAF 297 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~ 297 (334)
+|.+|.+|.++|++++
T Consensus 209 tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 209 TKFIGGHGTSIGGVIV 224 (431)
T ss_pred ccccCCCCCceEEEEE
Confidence 9999999999999877
No 190
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.81 E-value=2.3e-18 Score=164.52 Aligned_cols=188 Identities=13% Similarity=0.074 Sum_probs=146.2
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~ 202 (334)
.++....|++++|++.|. +++++++|+++++..++.+++++||+|++++|.|+..... ....|+++..++..
T Consensus 48 gnPt~~~lE~~lA~l~g~--~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~-- 123 (377)
T TIGR01324 48 GTLTHFALQDAMCELEGG--AGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL-- 123 (377)
T ss_pred CCccHHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC--
Confidence 445568999999999984 5899999999999999999999999999999999866543 34578888877532
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
+.+.++++++ +++|+|++++|+||+|...+.+++.++++. ++++|+|++|....... + .+.+..++++|+
T Consensus 124 ---~~e~l~~~i~-~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~~~-p----l~~gaDivv~S~ 194 (377)
T TIGR01324 124 ---IGEDIATLIQ-PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLLFK-P----LEHGVDISIQAG 194 (377)
T ss_pred ---CHHHHHHhcC-CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccC-c----cccCceEEEecC
Confidence 2278888887 689999999999999999999999999987 99999999997533211 1 134567999999
Q ss_pred chhhcc-cccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 282 SKRAGL-AGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 282 SK~~gl-~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
+|.++- ++...|+++++++.++.+...... ..+++...+.+...|+
T Consensus 195 tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~ 243 (377)
T TIGR01324 195 TKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLR 243 (377)
T ss_pred ceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhh
Confidence 998853 346789999998887776643322 3456665555555554
No 191
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=1.8e-18 Score=165.69 Aligned_cols=187 Identities=19% Similarity=0.206 Sum_probs=145.7
Q ss_pred HHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHH
Q 019868 112 EVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAV 189 (334)
Q Consensus 112 ~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~ 189 (334)
+..+++.+ +..+..|+.+...+|++++|+++|.+ ++++++|+++++.+++.++ +++||+|+++.++|..+...+..
T Consensus 15 ~e~~~~~~~l~~~~~~~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~~~~~ 92 (379)
T PRK11658 15 EELAAVKEVLRSGWITTGPKNQALEQAFCQLTGNQ--HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLNMIVL 92 (379)
T ss_pred HHHHHHHHHHHcCCccCCHhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHHHHHH
Confidence 33444443 33334455667899999999999974 6888999999999999998 79999999999999999888889
Q ss_pred CCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCch
Q 019868 190 NGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRM 266 (334)
Q Consensus 190 ~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~ 266 (334)
.|++++.++.+ +++.+|++.++++++ +++|+|+ |+|++|...+.+++.++++. |+++|+|++|.... +.+...
T Consensus 93 ~G~~~v~vd~~~~~~~~d~~~l~~~i~-~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~ 168 (379)
T PRK11658 93 LGATPVMVDVDRDTLMVTPEAIEAAIT-PRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHI 168 (379)
T ss_pred cCCEEEEEecCCCcCCcCHHHHHHhcc-cCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeec
Confidence 99999999964 456799999999997 6899887 66789999999999999987 99999999998533 222111
Q ss_pred hhhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhc
Q 019868 267 EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAK 309 (334)
Q Consensus 267 ~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~ 309 (334)
+... +.+.||+|...+++.+.|+++. +++++++++..+
T Consensus 169 ---g~~g--~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~ 207 (379)
T PRK11658 169 ---GARG--TAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLK 207 (379)
T ss_pred ---CCCC--CEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHH
Confidence 2222 2456666555567788898887 478887776543
No 192
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.80 E-value=3.2e-18 Score=163.25 Aligned_cols=173 Identities=18% Similarity=0.146 Sum_probs=136.1
Q ss_pred hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc------CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCC
Q 019868 131 SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL------DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFS 204 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~ 204 (334)
..++++.+|+++|++++++++++|+++++..++.++. ++||+|++++++|..|...++..|++++.++.+.++.
T Consensus 61 ~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~ 140 (373)
T TIGR03812 61 EEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYT 140 (373)
T ss_pred HHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCC
Confidence 3689999999999988899999999999888876654 4679999999999999999999999999999777788
Q ss_pred CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-----CC--chhhhcCCCcEE
Q 019868 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-----ES--RMEWVKKHDNLI 276 (334)
Q Consensus 205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-----~~--~~~~~~~~~~~i 276 (334)
+|++++++.++ +++..+++..|+||||.+.+.+++.++++. ++++|+|++|..+... .. ... +....-..
T Consensus 141 ~d~~~l~~~l~-~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d-~~~~~~d~ 218 (373)
T TIGR03812 141 VDVKDVEDLID-DNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFD-FSLPGVQS 218 (373)
T ss_pred cCHHHHHHHHh-hCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCcc-ccCCCCCE
Confidence 99999999986 455555555589999999999999999987 9999999999865310 00 000 00111224
Q ss_pred EEcCCchhhcccccchheeE-cCHHHHHHHH
Q 019868 277 VLRTFSKRAGLAGLRVGYGA-FPLSIIEYLW 306 (334)
Q Consensus 277 ~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~ 306 (334)
+..|.+| |++++.|+|+++ .++++++.+.
T Consensus 219 ~~~s~~K-~~~~~~~~G~~~~~~~~~~~~l~ 248 (373)
T TIGR03812 219 ITIDPHK-MGLSPIPAGGILFRSKSYLKYLS 248 (373)
T ss_pred EEECccc-cCCCcCCceEEEEeCHHHHhhhc
Confidence 4567789 788888998666 5778887764
No 193
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.80 E-value=3.2e-18 Score=162.87 Aligned_cols=194 Identities=13% Similarity=0.042 Sum_probs=146.3
Q ss_pred CCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868 106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (334)
Q Consensus 106 ~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~ 181 (334)
|....+.+.+++.... .++-+.. -..++|+.++++++++++ .|++|+|+++++..++..+..+||.+++..+.+.
T Consensus 11 p~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~ 89 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDW-CTWDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAY 89 (363)
T ss_pred CCCCCHHHHHHhCCCC-CCCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChh
Confidence 4445677777765521 1111211 256889999999999764 6999999999999999999888888777655543
Q ss_pred hH--HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868 182 MY--EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (334)
Q Consensus 182 ~~--~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~ 257 (334)
.. ...++..|++++.++.++++.+|++++++++++ .+++++.+++++||||..++.+++.++++. ++++|+|++++
T Consensus 90 ~~~~~~~a~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~ 169 (363)
T TIGR02326 90 GARIVQIAEYLGIPHHVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSS 169 (363)
T ss_pred hHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEcccc
Confidence 33 466778999999999877788999999999864 346788889999999999999999999987 99999998765
Q ss_pred CccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHHHHHHHH
Q 019868 258 EFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~~i~~l~ 306 (334)
. ...+ . .+...+..+++.|++|.+ |.+| +||++++++.++.+.
T Consensus 170 ~-g~~~--~-~~~~~~~D~~~~s~~K~l~~p~G--~G~l~~~~~~~~~~~ 213 (363)
T TIGR02326 170 F-GGIP--I-DIAELHIDYLISSANKCIQGVPG--FGFVIARQAELAACK 213 (363)
T ss_pred c-cCcc--c-chhhcCccEEEecCccccccCCc--ceEEEECHHHHHHhh
Confidence 3 2111 1 122334558899999976 4445 799999998887653
No 194
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.80 E-value=2.2e-18 Score=164.80 Aligned_cols=188 Identities=18% Similarity=0.217 Sum_probs=144.0
Q ss_pred HHHHHHHhc-CcCCCCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHH
Q 019868 111 PEVREALGQ-LKFPYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDA 187 (334)
Q Consensus 111 ~~v~~al~~-~~~~~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~ 187 (334)
++..+++.+ +..+..+. .+-..++.+.++++++. +++++++|+++++..++.++ ++|||+|+++.++|..+...+
T Consensus 11 ~~e~~a~~~~~~~~~~~~~g~~~~~~e~~la~~~g~--~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~~~ 88 (376)
T TIGR02379 11 GQELEYIAEAISEGKLSGDGPFSRRCETWLENRTGT--KKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAF 88 (376)
T ss_pred HHHHHHHHHHHHcCCccCCcHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHHH
Confidence 344555554 33323332 22357888889998875 58999999999999999887 799999999999999998888
Q ss_pred HHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCC
Q 019868 188 AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLES 264 (334)
Q Consensus 188 ~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~ 264 (334)
...|++++.++.+ +++.+|+++++++++ +++|+|+ |+||+|...+.+++.++++. +++||+|++|+.+. +.+.
T Consensus 89 ~~~G~~~v~vd~d~~~~~~d~~~le~~i~-~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~ 164 (376)
T TIGR02379 89 VLRGAKIVFVDIRPDTMNIDETLIESAIT-HRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGR 164 (376)
T ss_pred HHcCCEEEEEecCCCcCCCCHHHHHHhcC-cCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCc
Confidence 8999999999965 447899999999997 6899987 77889999999999999987 99999999998765 3332
Q ss_pred chhhhcCCCcEEEEcCC--chhhcccccchheeEcC-HHHHHHHHHhc
Q 019868 265 RMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWRAK 309 (334)
Q Consensus 265 ~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~~-~~~i~~l~~~~ 309 (334)
....+. .+.+.|| +|.+. +|.+.|+++++ ++++++++..+
T Consensus 165 ~~g~~~----~~~~fSf~~~K~l~-~g~~gG~v~~~~~~~~~~~~~~~ 207 (376)
T TIGR02379 165 ALGSIG----HLGTFSFHETKNYT-SGGEGGALLINDQAFIERAEIIR 207 (376)
T ss_pred ccCCCC----CEEEEeCCCCCcCc-ccCCceEEEECCHHHHHHHHHHH
Confidence 222111 1333333 38775 68789998875 78888777554
No 195
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=3.7e-18 Score=164.90 Aligned_cols=189 Identities=14% Similarity=0.149 Sum_probs=146.9
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDF 203 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~~ 203 (334)
.+....|++.+|++.+.. ..++++++++|+.+++.+++++||+|+++.++|...... +...|+++..++ +
T Consensus 60 nPtv~~lE~~la~leg~~--~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd----~ 133 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGV--GAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN----P 133 (432)
T ss_pred CcHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC----C
Confidence 556889999999999853 578899999999999999999999999999999755444 567899999885 3
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
.+|+++++++++ +++|+|++.+|+||+|.+.+.+++.++++. ++++|+|++|.- +.....-..+-.|+++|+|
T Consensus 134 ~~d~~~l~~~I~-~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t-----P~~~~pl~~GADIvv~S~T 207 (432)
T PRK06702 134 NLTADEIVALAN-DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT-----PYLCQAFEHGANIIVHSTT 207 (432)
T ss_pred CCCHHHHHHhCC-cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc-----hhhCChhhcCCCEEEEccc
Confidence 578999999997 689999999999999999999999999988 999999999851 1111112344569999999
Q ss_pred h-----hhcccccch-----heeEcC-HHHH---------------------H--HHHHhcC-CCCCcHHHHHHHHHHhc
Q 019868 283 K-----RAGLAGLRV-----GYGAFP-LSII---------------------E--YLWRAKQ-PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 283 K-----~~gl~G~R~-----G~l~~~-~~~i---------------------~--~l~~~~~-~~~~~~~~q~aa~~~L~ 327 (334)
| ..+++|.++ +|...+ .+++ . .....+. ..+++++..+.+...|+
T Consensus 208 Ky~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~ 287 (432)
T PRK06702 208 KYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLE 287 (432)
T ss_pred cccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccC
Confidence 9 778888887 565442 1111 1 1111111 25788888888888887
Q ss_pred C
Q 019868 328 N 328 (334)
Q Consensus 328 ~ 328 (334)
.
T Consensus 288 T 288 (432)
T PRK06702 288 T 288 (432)
T ss_pred c
Confidence 5
No 196
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.80 E-value=9e-18 Score=162.32 Aligned_cols=224 Identities=17% Similarity=0.108 Sum_probs=159.5
Q ss_pred CCeeecCCCC-CCCCCCHHHHHHHhc-Cc-CCCC-------CC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDANE-NPYGPPPEVREALGQ-LK-FPYI-------YP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~~-~~~~~~~~v~~al~~-~~-~~~~-------Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++++|+.|+ -.+...|++++++.+ +. .+.. +. .+...+|++++|++++. ++.+++++|+ ++...++
T Consensus 45 ~~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~-~~~~~~~SG~-~An~~ai 122 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK-EAALLFTSGY-VSNWAAL 122 (406)
T ss_pred ccEEEeecccccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC-CcEEEeCCcH-HHHHHHH
Confidence 4678887764 456678999988765 22 1111 11 12357899999999985 3445555554 6777788
Q ss_pred HHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHH
Q 019868 164 RCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDE 238 (334)
Q Consensus 164 ~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~ 238 (334)
..+.. +||.|+.....|......+...|.+++.++. .|++.+++.++ .+++++|++++++|++|.+.+.+
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~ 197 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-----NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIA 197 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-----CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHH
Confidence 76655 7888877777888777777778888877763 25666666554 23678999999999999999999
Q ss_pred HHHHHHhC-CCeEEEccCCcCccCC--CC-chhhhc-CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--
Q 019868 239 DLLKILEM-PILVVLDEAYTEFSGL--ES-RMEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-- 311 (334)
Q Consensus 239 ~l~~l~~~-~~~lIvDeay~~~~~~--~~-~~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~-- 311 (334)
++.++++. ++++|+||+|....++ +. .....+ ..+.+++++||||.||++| ||+++++++++.+.+....
T Consensus 198 ~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~ 274 (406)
T PRK13393 198 EICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFI 274 (406)
T ss_pred HHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCce
Confidence 99999987 9999999999733321 11 111111 1224688899999999888 9999999999988876654
Q ss_pred --CCCcHHHHHHHHHHhcC
Q 019868 312 --YNVSVAAEVAACAALQN 328 (334)
Q Consensus 312 --~~~~~~~q~aa~~~L~~ 328 (334)
.+.++..+.++.++|+.
T Consensus 275 ~t~~~~p~~~aa~~aaL~~ 293 (406)
T PRK13393 275 FTTSLPPAVAAGALASVRH 293 (406)
T ss_pred ecCccCHHHHHHHHHHHHH
Confidence 23566777777777753
No 197
>PLN02651 cysteine desulfurase
Probab=99.80 E-value=3.5e-18 Score=162.78 Aligned_cols=212 Identities=19% Similarity=0.090 Sum_probs=154.0
Q ss_pred CCCHHHHHHHhc-CcCCCCCCC-----------cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh----cCCCC
Q 019868 108 GPPPEVREALGQ-LKFPYIYPD-----------PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV----LDPGD 171 (334)
Q Consensus 108 ~~~~~v~~al~~-~~~~~~Yp~-----------~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l----~~~gd 171 (334)
++|+.+.+++.+ +......|. .-..++|+.++++++.++++|++|+|++++++.++..+ .++||
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~ 89 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKK 89 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCC
Confidence 466788888765 211111121 11457899999999999999999999999988877654 47899
Q ss_pred EEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-C
Q 019868 172 KIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (334)
Q Consensus 172 ~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~ 247 (334)
+|+++...|+.+... +...|++++.++.++++.+|+++++++++ ++++++++++++|+||.+.+.+++.++++. +
T Consensus 90 ~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~-~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g 168 (364)
T PLN02651 90 HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLVDLDELAAAIR-PDTALVSVMAVNNEIGVIQPVEEIGELCREKK 168 (364)
T ss_pred EEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEECCCCCceecccHHHHHHHHHHcC
Confidence 999999888765433 33579999999876778899999999997 689999999999999999999999999987 9
Q ss_pred CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh---------cCCCCCcHHH
Q 019868 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA---------KQPYNVSVAA 318 (334)
Q Consensus 248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~ 318 (334)
+++++|.++...... -.+...+-++++.|..| |+ ....+|+++++++..+.+... ....+.+..+
T Consensus 169 ~~~~vD~a~~~g~~~----~~~~~~~~D~~~~s~hK-~~-gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~ 242 (364)
T PLN02651 169 VLFHTDAAQAVGKIP----VDVDDLGVDLMSISGHK-IY-GPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPL 242 (364)
T ss_pred CEEEEEcchhhCCcc----cCcccCCCCEEEechhh-hC-CCCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHH
Confidence 999999998743211 11223445799999999 43 234589999877655443211 1123455555
Q ss_pred HHHHHHHh
Q 019868 319 EVAACAAL 326 (334)
Q Consensus 319 q~aa~~~L 326 (334)
..+..++|
T Consensus 243 ~~~l~~al 250 (364)
T PLN02651 243 VVGLGAAC 250 (364)
T ss_pred HHHHHHHH
Confidence 55555554
No 198
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.79 E-value=5.3e-18 Score=162.20 Aligned_cols=187 Identities=18% Similarity=0.198 Sum_probs=140.0
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh-hHHH---HHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEF---DAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~-~~~~---~~~~~G~~v~~v~~ 199 (334)
.+|+++...+|++.+|++.|.+ +.+++++|. .++..++ .++++||+|+++.|.|+ .|.. .+...|++++.++.
T Consensus 45 ~r~~~p~~~~Le~~lA~l~g~~-~~~~~~sG~-aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 45 SRTGNPTRAALEELIAVLEGGH-AGFAFGSGM-AAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-ceEEeCCHH-HHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 3456777899999999999975 356666665 6777665 47899999999999998 4543 33447999998863
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|....... +. .....+++
T Consensus 122 -----~d~~~l~~ai~-~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~-p~----~~g~Divv 190 (377)
T PRK07671 122 -----SNLEEVEEAIR-PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQS-PI----SLGADIVL 190 (377)
T ss_pred -----CCHHHHHHhcC-CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCC-hh----hhCCeEEE
Confidence 38899999997 689999999999999999999999999987 99999999997533321 11 22446999
Q ss_pred cCCchhhcccc-cchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHH
Q 019868 279 RTFSKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACA 324 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~ 324 (334)
+|+||.++-++ .-.|++++ ++++++.+...+.. ...++...+.+..
T Consensus 191 ~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~ 240 (377)
T PRK07671 191 HSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLR 240 (377)
T ss_pred ecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHc
Confidence 99999987433 34566666 56788877766654 3345554444443
No 199
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.79 E-value=6.1e-18 Score=161.86 Aligned_cols=185 Identities=20% Similarity=0.215 Sum_probs=140.8
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~ 203 (334)
.+...+|++.++++++. ++++++++++.++..++. ++++||+|+++++.|..+.. .+...|++++.++.
T Consensus 46 ~p~~~~le~~la~l~g~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~---- 118 (378)
T TIGR01329 46 NPTRTALESLLAKLDKA--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT---- 118 (378)
T ss_pred ChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC----
Confidence 44577999999999996 466666777789988776 78999999999999987654 34558999999875
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
.|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|..... ..+.. .+-++++.|++
T Consensus 119 -~d~~~le~~i~-~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-~~~l~----~g~Di~v~S~t 191 (378)
T TIGR01329 119 -TDLDKVKAALG-PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-CNPLE----LGADIVYHSAT 191 (378)
T ss_pred -CCHHHHHHhcC-cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-CChhh----cCCcEEEEecc
Confidence 27899999997 689999999999999999999999999987 999999999853321 11111 23459999999
Q ss_pred hhhcc-cccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHh
Q 019868 283 KRAGL-AGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAAL 326 (334)
Q Consensus 283 K~~gl-~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L 326 (334)
|.++- .|.+.|++++ ++++.+++...+.. ...++...+.+...|
T Consensus 192 K~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l 239 (378)
T TIGR01329 192 KFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGI 239 (378)
T ss_pred eeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccC
Confidence 97753 3578999988 55666767655542 345555544444443
No 200
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.79 E-value=8.5e-18 Score=160.09 Aligned_cols=197 Identities=19% Similarity=0.175 Sum_probs=149.9
Q ss_pred CCCHHHHHHHhc-Cc----CCCCCCCcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC----CCCEEEEc
Q 019868 108 GPPPEVREALGQ-LK----FPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD----PGDKIVDC 176 (334)
Q Consensus 108 ~~~~~v~~al~~-~~----~~~~Yp~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~----~gd~Vl~~ 176 (334)
++.|.+++++.+ +. ....|+... ..++++.+++++|++.+++++++|+++++..++..+.+ ++|+|++.
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~ 110 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP 110 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence 355777777654 21 112233322 26799999999998877899999999999998876653 57999999
Q ss_pred CCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868 177 PPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (334)
Q Consensus 177 ~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea 255 (334)
++.|..+...++..|++++.++.++++.+|+++++++++ +++++|++++++|+||.+.+.+++.++++. ++++++|++
T Consensus 111 ~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a 189 (371)
T PRK13520 111 ESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLID-DNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAA 189 (371)
T ss_pred CcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHh-hCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEec
Confidence 999999998888899999999977777899999999997 567788888899999999999999999987 999999999
Q ss_pred CcCccCC--CCchh-hhcCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHH
Q 019868 256 YTEFSGL--ESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLW 306 (334)
Q Consensus 256 y~~~~~~--~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~ 306 (334)
|..+... ..... ......-..+..|..| |+++|.++|++++ ++++++.+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K-~~~a~~~~G~~~~~~~~~~~~l~ 243 (371)
T PRK13520 190 FGGFVIPFLDDPPNFDFSLPGVDSITIDPHK-MGLAPIPAGGILFRDESYLDALA 243 (371)
T ss_pred chhHHHHhhcCCCCccccCCCCceEEECCcc-ccCccCCceEEEEcCHHHHHhhc
Confidence 9866421 11100 0111122355567788 7778899998876 666777664
No 201
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.79 E-value=7.7e-18 Score=161.15 Aligned_cols=185 Identities=18% Similarity=0.190 Sum_probs=143.4
Q ss_pred HHHHhc-CcCCCCCCCcC-hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHC
Q 019868 114 REALGQ-LKFPYIYPDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVN 190 (334)
Q Consensus 114 ~~al~~-~~~~~~Yp~~g-~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~ 190 (334)
.+++.+ +..+..|+... ..++.+.++++++. +++++++|+++++.+++..+ +++||+|+++.|+|..+...+...
T Consensus 14 ~~~~~~~l~~~~~~g~~~~~~~~e~~la~~~g~--~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~~~~~~~ 91 (375)
T PRK11706 14 LDYIQQAMSSGKLCGDGGFTRRCQQWLEQRFGS--AKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLR 91 (375)
T ss_pred HHHHHHHHHcCCccCCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHc
Confidence 444443 33334455443 46788889999886 58999999999999887765 689999999999999999999999
Q ss_pred CCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchh
Q 019868 191 GAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRME 267 (334)
Q Consensus 191 G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~ 267 (334)
|++++.++.+ +++.+|+++++++++ +++++|+++ |++|...+.+++.++++. +++||+|++|+.+. +.+....
T Consensus 92 G~~~v~~d~d~~~~~~d~~~le~~i~-~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g 167 (375)
T PRK11706 92 GAKIVFVDIRPDTMNIDETLIEAAIT-PKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALG 167 (375)
T ss_pred CCEEEEEecCCCcCCcCHHHHHHhcC-CCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeee
Confidence 9999999865 347899999999997 589999976 469999999999999987 99999999998776 3332222
Q ss_pred hhcCCCcEEEEcCCc--hhhcccccchheeEcCHHHHHHHHHhc
Q 019868 268 WVKKHDNLIVLRTFS--KRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 268 ~~~~~~~~i~i~S~S--K~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
... .+.+.||. |.++ +|.|.++++.+++++++++..+
T Consensus 168 ~~~----~~~~~Sf~~~K~l~-~g~gG~~~~~~~~~~~~~~~~~ 206 (375)
T PRK11706 168 TIG----HIGCFSFHETKNYT-AGEGGALLINDPALIERAEIIR 206 (375)
T ss_pred cCc----CEEEEeCCCCcccc-ccCCeEEEECCHHHHHHHHHHH
Confidence 111 24445554 9987 5888888888889888766554
No 202
>PRK05939 hypothetical protein; Provisional
Probab=99.79 E-value=4.6e-18 Score=163.50 Aligned_cols=158 Identities=19% Similarity=0.202 Sum_probs=128.2
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH---HHHHHCCCeEEEeeCCCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE---FDAAVNGAAVVKVPRKSDFS 204 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~G~~v~~v~~~~~~~ 204 (334)
++....|++++|++.|.. ..++++ +++.++..++.+++++||+|+++++.|+.+. ..+...|++++.++.
T Consensus 46 ~p~~~~lE~~la~leg~~-~~v~~s-sG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~----- 118 (397)
T PRK05939 46 TPTTAALEAKITKMEGGV-GTVCFA-TGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA----- 118 (397)
T ss_pred CHHHHHHHHHHHHHhCCC-eEEEeC-CHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC-----
Confidence 344669999999999864 345554 4589999999999999999999999997543 345568999999874
Q ss_pred CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch
Q 019868 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (334)
Q Consensus 205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK 283 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|..... . .....+.++++.|+||
T Consensus 119 ~d~e~l~~~l~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~----~-~~~~~gaDivv~S~sK 192 (397)
T PRK05939 119 TDVQNVAAAIR-PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL----F-RPKDVGASLVINSLSK 192 (397)
T ss_pred CCHHHHHHhCC-CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc----c-CccccCCEEEEecCee
Confidence 37899999997 689999999999999999999999999987 999999999863221 0 1112356799999999
Q ss_pred hhcccccchheeEcC
Q 019868 284 RAGLAGLRVGYGAFP 298 (334)
Q Consensus 284 ~~gl~G~R~G~l~~~ 298 (334)
.++..|.++|+++++
T Consensus 193 ~~~g~g~~igg~v~~ 207 (397)
T PRK05939 193 YIAGHGNALGGAVTD 207 (397)
T ss_pred cccCCCCeEEEEEec
Confidence 999889999998774
No 203
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.79 E-value=4.1e-18 Score=163.06 Aligned_cols=186 Identities=20% Similarity=0.151 Sum_probs=142.3
Q ss_pred CCCHHHHHHHhc-CcCCCCCCCc----------ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc---CCCCEE
Q 019868 108 GPPPEVREALGQ-LKFPYIYPDP----------ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL---DPGDKI 173 (334)
Q Consensus 108 ~~~~~v~~al~~-~~~~~~Yp~~----------g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~---~~gd~V 173 (334)
++++.+.+++.+ +.....+|.. ...++|+.+++++|+++++|++|+|+++++..++..++ .+||+|
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~v 89 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHI 89 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeE
Confidence 456778888765 2211222211 14578899999999999999999999999999988764 457899
Q ss_pred EEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCe
Q 019868 174 VDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PIL 249 (334)
Q Consensus 174 l~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~ 249 (334)
++....|+.+... ++..|++++.++.++++.+|++++++.++ ++++++++++++||||.+++.+++.++++. +++
T Consensus 90 v~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~g~~~~~~l~~~i~-~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~ 168 (379)
T TIGR03402 90 ITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAIT-DDTALVSVMWANNETGTIFPIEEIGEIAKERGAL 168 (379)
T ss_pred EEcccccHHHHHHHHHHHHcCCEEEEEccCCCCcCCHHHHHHhcC-CCcEEEEEEcccCCeeecccHHHHHHHHHHcCCE
Confidence 9999888765433 33479999999876677899999999997 689999999999999999999999999987 999
Q ss_pred EEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 250 VVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 250 lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+++|+++..... . -.+...+-.+++.|.+|.+|.+| +|+++++++
T Consensus 169 vivD~~~~~g~~---~-~~~~~~~~D~~~~s~~K~~gp~G--~g~l~v~~~ 213 (379)
T TIGR03402 169 FHTDAVQAVGKI---P-IDLKEMNIDMLSLSGHKLHGPKG--VGALYIRKG 213 (379)
T ss_pred EEEECccccccc---c-cCcccCCCCEEEEcHHHcCCCCc--eEEEEECCC
Confidence 999999874211 1 11122344588889999766556 788877654
No 204
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.79 E-value=3.3e-18 Score=162.74 Aligned_cols=192 Identities=17% Similarity=0.130 Sum_probs=144.4
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCe-EEEeeCCCC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAA-VVKVPRKSD 202 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~-v~~v~~~~~ 202 (334)
.+|+++...+|++++|++.+ .+++++++|+++++.+++. ++++||+|+++.+.|......+...... -+.+ .
T Consensus 49 ~R~~~p~~~~le~~lA~leg--~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~----~ 121 (364)
T PRK07269 49 TRTKNPTRAKLEETLAAIES--ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHF----T 121 (364)
T ss_pred eCCCCccHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcCcEEE----E
Confidence 55688889999999999997 5689999999999999995 6799999999999997544433221000 0111 2
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
+..|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+. .....++++|+
T Consensus 122 ~~~d~~~l~~~i~-~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~-~pl----~~gaDivv~S~ 195 (364)
T PRK07269 122 YANTEEELIAAIE-EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQ-RPI----ELGADIVLHSA 195 (364)
T ss_pred ecCCHHHHHHhcC-cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hhCCcEEEecC
Confidence 3468999999997 689999999999999999999999999987 9999999997533221 222 22345999999
Q ss_pred chhhccccc-chheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 282 SKRAGLAGL-RVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 282 SK~~gl~G~-R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|.++-.|- =.|++++ ++++++.++..+.. ..++++..+.+...|+.
T Consensus 196 tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t 246 (364)
T PRK07269 196 TKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT 246 (364)
T ss_pred ceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc
Confidence 998864332 3578777 56777777654433 45788888877777765
No 205
>PRK05968 hypothetical protein; Provisional
Probab=99.79 E-value=1.1e-17 Score=160.64 Aligned_cols=190 Identities=19% Similarity=0.164 Sum_probs=147.5
Q ss_pred CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCC
Q 019868 125 IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRK 200 (334)
Q Consensus 125 ~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~ 200 (334)
+|+++...+|++++|+++|.+ +.+++ ++++.++..++.+++++||+|+++.+.|.. +...+...|++++.++.
T Consensus 59 r~~~p~~~~le~~lA~l~g~~-~av~~-~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (389)
T PRK05968 59 RGDNPTVRAFEEMLAKLEGAE-DARGF-ASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG- 135 (389)
T ss_pred CCCChhHHHHHHHHHHHhCCC-cEEEE-CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC-
Confidence 345666889999999999975 33444 555689998888889999999999999974 33456668999998863
Q ss_pred CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
.|++++++++ +++|+|++++|.||++...+.+++.++++. ++++|+|++|..+....+ .. .+..+++.
T Consensus 136 ----~d~~~l~~~i--~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p-~~----~g~Divv~ 204 (389)
T PRK05968 136 ----RDEEAVAKAL--PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRP-IT----LGVDLVIH 204 (389)
T ss_pred ----CCHHHHHHhc--ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCc-hh----cCCcEEEe
Confidence 2789999888 368999999999999999999999999887 999999999976553221 11 23358999
Q ss_pred CCchhhcccc-cchheeEcCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhcC
Q 019868 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQN 328 (334)
Q Consensus 280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~~L~~ 328 (334)
|++|.++.+| .+.|+++.++++++++++.... ..++++.++.+...|+.
T Consensus 205 S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t 257 (389)
T PRK05968 205 SASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT 257 (389)
T ss_pred eccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc
Confidence 9999987654 6889999999988887754332 35677777777776664
No 206
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.77 E-value=4e-17 Score=157.04 Aligned_cols=221 Identities=14% Similarity=0.157 Sum_probs=153.3
Q ss_pred ecCCCC-CCCCCCHHHHHHHhc-Cc-CC-------CCCCC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868 99 KIDANE-NPYGPPPEVREALGQ-LK-FP-------YIYPD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 99 ~l~~~~-~~~~~~~~v~~al~~-~~-~~-------~~Yp~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~ 167 (334)
+|+.++ -.+...|+++++..+ +. ++ ..|.. .+..+|++++|++++.+ +.+++++|.++.. .++.+++
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~-~~i~~l~ 79 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTS-STVAAFA 79 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHH-HHHHHhC
Confidence 344432 345566777766543 21 11 22543 35789999999999975 6788888888777 5666689
Q ss_pred CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc----------cCCceEEEEeCCCCccccCCcH
Q 019868 168 DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE----------REKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 168 ~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~----------~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
++||.|+++++.|..+...+...+++++.++..+ .-|++.+.+.+. ..++++|++.++.||+|.+.+.
T Consensus 80 ~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l 157 (392)
T PLN03227 80 KRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPL 157 (392)
T ss_pred CCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCH
Confidence 9999999999999998887777888888776431 113444444442 1357889999999999999999
Q ss_pred HHHHHHHhC-CCeEEEccCCcCcc-CCC--C-chhhh---cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868 238 EDLLKILEM-PILVVLDEAYTEFS-GLE--S-RMEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 238 ~~l~~l~~~-~~~lIvDeay~~~~-~~~--~-~~~~~---~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
+++.++++. ++++|+||+|. +. .+. . ..... ...+.++++.|+||.+| ++.|++++++++++.+....
T Consensus 158 ~~i~~l~~~~g~~livDe~~~-~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~~~ 233 (392)
T PLN03227 158 KELVALKEEFHYRLILDESFS-FGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRLSG 233 (392)
T ss_pred HHHHHHHHHcCCEEEEECccc-ccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHHhC
Confidence 999999987 99999999997 33 111 1 11111 12345799999999765 55599999999888776443
Q ss_pred CC--CCC--cHHHHHHHHHHhc
Q 019868 310 QP--YNV--SVAAEVAACAALQ 327 (334)
Q Consensus 310 ~~--~~~--~~~~q~aa~~~L~ 327 (334)
.. ++. ++..+.++.+++.
T Consensus 234 ~~~~~~~~~~p~~~~aa~~al~ 255 (392)
T PLN03227 234 SGYCFSASAPPFLAKADATATA 255 (392)
T ss_pred cCccccCCCCHHHHHHHHHHHH
Confidence 32 333 4666666665553
No 207
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.77 E-value=1.3e-17 Score=162.07 Aligned_cols=231 Identities=21% Similarity=0.210 Sum_probs=157.8
Q ss_pred CCCCCCeeecCCCCCC--CC-CCHHHHHHHhc-CcCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..+++.++|+..|... ++ .+|++.+++.+ +.....| +..+..+|+++|+++++. .++|++++|+++++..+++
T Consensus 44 d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~~~~sGseA~e~Alk 122 (423)
T TIGR00713 44 DVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVR 122 (423)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCCc-ccEEEEeCCHHHHHHHHHH
Confidence 3467789999877533 33 56888888775 3322233 566789999999998864 3689999999999999888
Q ss_pred Hhc--CCCCEEEEcCCCChhHHHHHHH---CCCeEEEeeCC----C-----CC---CCCHHHHHHhccc--CCceEEEEe
Q 019868 165 CVL--DPGDKIVDCPPTFTMYEFDAAV---NGAAVVKVPRK----S-----DF---SLNVELIADAVER--EKPKCIFLT 225 (334)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~~---~G~~v~~v~~~----~-----~~---~~d~~~l~~~l~~--~~~~~i~l~ 225 (334)
... ...++|+..+++|..+...+.. .|......+.. . .. .-|++++++.+++ .++++|++.
T Consensus 123 ~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~e 202 (423)
T TIGR00713 123 LARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVE 202 (423)
T ss_pred HHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEe
Confidence 532 3458999999999876543322 11111111100 0 00 0278999988863 467888886
Q ss_pred -CCCCccccCCc-HH---HHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcC
Q 019868 226 -SPNNPDGSIIN-DE---DLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 226 -~p~NPtG~~~~-~~---~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~ 298 (334)
.|+| +|.+.+ .+ ++.++++. ++++|+||+|.+|..+... ......... +.+|||.++ +|+|+||++++
T Consensus 203 p~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pD---i~t~sK~l~-~G~pig~v~~~ 277 (423)
T TIGR00713 203 PVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPD---LTTLGKIIG-GGLPVGAFGGR 277 (423)
T ss_pred CCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcc---hhhhhhhhc-CCCceeeeeEH
Confidence 8888 898887 34 44555554 9999999999888532211 111111122 347999999 99999999999
Q ss_pred HHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868 299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 299 ~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~ 327 (334)
+++++.+.... ..++.++++++++.++|+
T Consensus 278 ~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 278 REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLK 311 (423)
T ss_pred HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHH
Confidence 99999886321 236789999999888886
No 208
>PRK07505 hypothetical protein; Provisional
Probab=99.77 E-value=4.2e-17 Score=157.42 Aligned_cols=224 Identities=15% Similarity=0.134 Sum_probs=151.8
Q ss_pred CCCCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CC--CC------CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 92 RKPEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP--YI------YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 92 ~~~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~--~~------Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
.++..++|+..+.+ .+..+|++++++.+ +. .+ .. +......+++++|+++++. +.+++++|+ ++..
T Consensus 43 ~~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~sG~-~a~~ 119 (402)
T PRK07505 43 ADGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA--SVLTFTSCS-AAHL 119 (402)
T ss_pred cCCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC--CEEEECChH-HHHH
Confidence 45677899976432 22457888888765 32 11 11 1122356899999999986 555566555 5666
Q ss_pred HHHHHhc----CCCC-EEEEcCCCC-hhHHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc
Q 019868 161 LIMRCVL----DPGD-KIVDCPPTF-TMYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG 232 (334)
Q Consensus 161 ~~~~~l~----~~gd-~Vl~~~p~y-~~~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG 232 (334)
.++..+. .+|+ .|++.+..| +.+.. .....+.+++.+|. .|++.++++++ ++++++++++|+||||
T Consensus 120 ~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-----~d~~~l~~~~~-~~~~~~vl~~p~~~~G 193 (402)
T PRK07505 120 GILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-----NDLDALEDICK-TNKTVAYVADGVYSMG 193 (402)
T ss_pred HHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-----CCHHHHHHHHh-cCCCEEEEEecccccC
Confidence 6665322 2232 355666544 33221 11224567777764 38899999886 4678999999999999
Q ss_pred cCCcHHHHHHHHhC-CCeEEEccCCcCccC--CCC--chhhhc--CCCcEEEEcCCchhhcccccchheeEc-CHHHHHH
Q 019868 233 SIINDEDLLKILEM-PILVVLDEAYTEFSG--LES--RMEWVK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEY 304 (334)
Q Consensus 233 ~~~~~~~l~~l~~~-~~~lIvDeay~~~~~--~~~--~~~~~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~ 304 (334)
.+++.+++.++++. ++++|+||+|....+ .+. ...... ..+++++++||||.||++| ||+++ ++++++.
T Consensus 194 ~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~ 270 (402)
T PRK07505 194 GIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIEL 270 (402)
T ss_pred CcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHH
Confidence 99999999999987 999999999854322 111 112222 3678999999999999776 88875 7889998
Q ss_pred HHHhcCCC----CCcHHHHHHHHHHhc
Q 019868 305 LWRAKQPY----NVSVAAEVAACAALQ 327 (334)
Q Consensus 305 l~~~~~~~----~~~~~~q~aa~~~L~ 327 (334)
+.+...++ +++++++.++.++|+
T Consensus 271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 271 ILRYAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred HHHhCCCceeCCCCCHHHHHHHHHHHH
Confidence 88766654 456778888887776
No 209
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=8.9e-18 Score=162.81 Aligned_cols=160 Identities=19% Similarity=0.210 Sum_probs=128.6
Q ss_pred CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCC
Q 019868 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKS 201 (334)
Q Consensus 126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~ 201 (334)
++++...+|++++|++.|. +..++++++++++..++.+++++||+|+++.+.|+.....+.. .|+++..++.
T Consensus 55 ~~~pt~~~Le~~lA~l~g~--~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~-- 130 (425)
T PRK06084 55 IMNPTNDVLEQRVAALEGG--VGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH-- 130 (425)
T ss_pred CCCchHHHHHHHHHHHhCC--CceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC--
Confidence 3566788999999999984 3566777777999999999999999999999999843333322 5667666652
Q ss_pred CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
.|+++++++++ +++++|++++|+||||.+++.+++.++++. ++++|+|++|...... .+. ..+.++++.|
T Consensus 131 ---~d~e~le~ai~-~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~----~~gaDivv~S 201 (425)
T PRK06084 131 ---DDIAALEALID-ERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPF----EHGADIVVHS 201 (425)
T ss_pred ---CCHHHHHHHhc-cCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-Chh----hcCCCEEEEC
Confidence 38999999997 589999999999999999999999999987 9999999999743321 111 2345699999
Q ss_pred CchhhcccccchheeEcC
Q 019868 281 FSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 281 ~SK~~gl~G~R~G~l~~~ 298 (334)
++|.++.+|.++|.+++.
T Consensus 202 ~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 202 LTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred chhcccccccceeEEEEe
Confidence 999999899999987763
No 210
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.77 E-value=1.7e-17 Score=159.90 Aligned_cols=228 Identities=14% Similarity=0.158 Sum_probs=155.1
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CC-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++++++|+..|. ..++ ..|++.+++.+ +.. .. .+..+...+|.++++++.+. +.+++++++++++..+
T Consensus 36 d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGseA~e~A 113 (396)
T PRK04073 36 DPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTGK--DMVLPMNTGAEAVETA 113 (396)
T ss_pred ECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCCC--CeEEEcCChHHHHHHH
Confidence 34677889986653 2343 46888888765 321 11 12333456788888887763 6899999999999998
Q ss_pred HHHhcC---------CC-CEEEEcCCCChhHH-HHHHHCCCe------------EEEeeCCCCCCCCHHHHHHhcccCCc
Q 019868 163 MRCVLD---------PG-DKIVDCPPTFTMYE-FDAAVNGAA------------VVKVPRKSDFSLNVELIADAVEREKP 219 (334)
Q Consensus 163 ~~~l~~---------~g-d~Vl~~~p~y~~~~-~~~~~~G~~------------v~~v~~~~~~~~d~~~l~~~l~~~~~ 219 (334)
++.... +| ++|+..+-+|.... ......+.. +..++. .|++++++.++ +++
T Consensus 114 lk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~-~~~ 187 (396)
T PRK04073 114 IKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-----GDLEALKAAIT-PNT 187 (396)
T ss_pred HHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-----CCHHHHHHhcc-cCe
Confidence 885531 34 67877776665433 332222211 122221 27899999886 578
Q ss_pred eEEEEeCCCCccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhe
Q 019868 220 KCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (334)
Q Consensus 220 ~~i~l~~p~NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~ 294 (334)
++|+++.++||||.+++. +++.++++. ++++|+||+|.+|...+.... ....+...-+.+|||.+|.+|+|+||
T Consensus 188 ~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pdi~~~sK~lg~gg~~ig~ 266 (396)
T PRK04073 188 AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPDMYILGKALGGGVFPISC 266 (396)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCCEEEecccccCCCCcceE
Confidence 999999999999999874 456666665 999999999998765332221 11111111233589999988899999
Q ss_pred eEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868 295 GAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 295 l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
+++++++++.+.+.. ..++.++++++++.++|+
T Consensus 267 ~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~ 301 (396)
T PRK04073 267 VAANRDILGVFTPGSHGSTFGGNPLACAVSIAALE 301 (396)
T ss_pred EEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999999886533 347889999999999996
No 211
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.76 E-value=9.7e-17 Score=151.94 Aligned_cols=224 Identities=21% Similarity=0.226 Sum_probs=169.4
Q ss_pred CCCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CC-----CC--CCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 94 PEDIVKIDANEN-PYGPPPEVREALGQ-LK-FP-----YI--YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~-----~~--Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
+.++++|+.|+. .+...|+++++..+ +. ++ .+ ++.. -..+|.+.||+|+|.+ +-+++++|-. +...+
T Consensus 38 ~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e-~al~f~SGy~-AN~~~ 115 (388)
T COG0156 38 GRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAE-AALLFSSGFV-ANLGL 115 (388)
T ss_pred CceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCC-cEEEEcccch-hHHHH
Confidence 466899988764 56777888877654 21 11 11 2222 2568999999999964 4566666665 56667
Q ss_pred HHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcH
Q 019868 163 MRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 163 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~ 237 (334)
+.+|++++|.|+...-.|.+....++..+++++.++. -|+++|++.+++. +.++|+........|.+.+.
T Consensus 116 i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL 190 (388)
T COG0156 116 LSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPL 190 (388)
T ss_pred HHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCH
Confidence 7779999999999999999999999999999999874 3789999888641 24666666999999999999
Q ss_pred HHHHHHHhC-CCeEEEccCCcCccCCCCchhh---h--cCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEW---V--KKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~---~--~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
+++.+|++. +.++++||+|+-...++.-... . ...+.+|+++||||+||..| ||+.++..+++.+.+...+
T Consensus 191 ~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~ar~ 267 (388)
T COG0156 191 PELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRARP 267 (388)
T ss_pred HHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhCCc
Confidence 999999998 9999999999877654332221 1 12455899999999999888 9999999999999887666
Q ss_pred C----CCcHHHHHHHHHHhc
Q 019868 312 Y----NVSVAAEVAACAALQ 327 (334)
Q Consensus 312 ~----~~~~~~q~aa~~~L~ 327 (334)
| ++++...+++.++|+
T Consensus 268 ~ifStalpP~~aaa~~~al~ 287 (388)
T COG0156 268 FIFSTALPPAVAAAALAALR 287 (388)
T ss_pred eeccCCCCHHHHHHHHHHHH
Confidence 2 356665555555554
No 212
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.75 E-value=6.9e-17 Score=154.64 Aligned_cols=174 Identities=14% Similarity=0.153 Sum_probs=132.5
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPR 199 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~ 199 (334)
.+|+++....|++++|++.|.+ ..+++++| +.++..++. ++++||+|++++|.|+.. ...+...|+++..++.
T Consensus 45 ~r~~~p~~~~Le~~la~l~g~~-~al~~~SG-~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 45 SRSGNPTRFALEELIADLEGGV-KGFAFASG-LAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred cCCCChhHHHHHHHHHHHhCCC-CEEEECCH-HHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 3456667889999999999954 34666555 568877664 789999999999999743 3345568988888763
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEE
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVL 278 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i 278 (334)
.|+++++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|.......+ . ..+..+++
T Consensus 122 -----~d~e~l~~ai~-~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p-~----~~gaDivv 190 (380)
T PRK06176 122 -----SDLSQIKKAIK-PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNP-L----LLGADIVV 190 (380)
T ss_pred -----CCHHHHHHhcC-cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCc-c----ccCCCEEE
Confidence 37999999997 689999999999999999999999999988 999999999986443221 1 22445999
Q ss_pred cCCchhhcccc-cchheeEcC-HHHHHHHHHhcCC
Q 019868 279 RTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP 311 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~ 311 (334)
.|++|.++.+| .-.|+++.+ +++.+.+...+..
T Consensus 191 ~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~ 225 (380)
T PRK06176 191 HSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNA 225 (380)
T ss_pred ecCceeccCCccceeeEEEecHHHHHHHHHHHHHH
Confidence 99999987555 345777774 5666666554443
No 213
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.75 E-value=2.4e-17 Score=155.50 Aligned_cols=174 Identities=18% Similarity=0.106 Sum_probs=133.6
Q ss_pred CCC-CCcChHHHHHHHHHh----cCCC--CCCEEEeCCHHHHHHHHHHHhcC------------C--CCEEEEcCCCChh
Q 019868 124 YIY-PDPESRRLRAALAKD----SGLE--SDHILVGCGADELIDLIMRCVLD------------P--GDKIVDCPPTFTM 182 (334)
Q Consensus 124 ~~Y-p~~g~~~lr~~lA~~----~~~~--~~~I~~t~G~~~~i~~~~~~l~~------------~--gd~Vl~~~p~y~~ 182 (334)
..| ..++..+++++++++ +|++ .+++++|+|+++++..++.++.. + ++.|++++++|..
T Consensus 28 ~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~ 107 (345)
T cd06450 28 FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS 107 (345)
T ss_pred cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH
Confidence 336 345666777766554 5774 45899999999999999987742 2 3478889999999
Q ss_pred HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCC
Q 019868 183 YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAY 256 (334)
Q Consensus 183 ~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay 256 (334)
+...+...|++++.++.++++.+|++++++++++ .++++|++++|+||||.+.+.+++.++++. ++++++|++|
T Consensus 108 ~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~ 187 (345)
T cd06450 108 VEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAY 187 (345)
T ss_pred HHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechh
Confidence 9888888899999999766678999999999863 167889999999999999999999999987 9999999999
Q ss_pred cCccCCCC-chhhhcC-CCcEEEEcCCchhhcccccchheeEcC
Q 019868 257 TEFSGLES-RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 257 ~~~~~~~~-~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~ 298 (334)
..+..... ....... .+-+.+..|++|.++ ++.|+|+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~-~p~g~g~~~~~ 230 (345)
T cd06450 188 GGFLLPFPEPRHLDFGIERVDSISVDPHKYGL-VPLGCSAVLVR 230 (345)
T ss_pred hHHHhhChhhHHHhcCccccCEEEEchhHhhC-CCcchHHHHHH
Confidence 87663211 1110111 123467789999554 77889998765
No 214
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.75 E-value=4.1e-17 Score=153.11 Aligned_cols=199 Identities=19% Similarity=0.173 Sum_probs=158.5
Q ss_pred CCCCeeecCCCCCCCCCCHHHHHHHhcCc-----CC-CC-C---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 93 KPEDIVKIDANENPYGPPPEVREALGQLK-----FP-YI-Y---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 93 ~~~~~i~l~~~~~~~~~~~~v~~al~~~~-----~~-~~-Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
.+.+.+.|+.+.. -+.++.|.+++.... .. .. | +..+.++.|+.+|++++.++.+|++|+|+|++++++
T Consensus 40 ~~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 40 HGTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred CCCccEEEecCcC-CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 3456677776543 345688888877521 11 22 3 123478899999999999998999999999999999
Q ss_pred HHHhc-CCCC----EEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 163 MRCVL-DPGD----KIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 163 ~~~l~-~~gd----~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
++.+. ..+| .|++..-.|+.....+ +..|+++..+|.++++..|++.+++.++ ++++++.+.+.+|.+|.+
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~-~~T~lv~I~~Vnn~~gv~ 197 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAIR-SKTRLVSIMHVNNEIGVL 197 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccCccccccHHHHHHhcC-CCceEEEEEecccCcccc
Confidence 99875 3455 8999998888655443 4479999999987888899999999998 799999999999999999
Q ss_pred CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868 235 INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 235 ~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
.|.+|+.++++. ++.+++|.+++- +...-.+.+-+-.++..|.+|.||.+| +|++++.+
T Consensus 198 ~Pv~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D~~s~s~HK~ygp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 198 QPVKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNADFLSISAHKIYGPPG--IGALYVRR 257 (428)
T ss_pred ccHHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCchheeeecccccCCCc--ceEEEEcc
Confidence 999999999998 899999999873 233333344455688899999999999 99999875
No 215
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=7e-17 Score=154.51 Aligned_cols=191 Identities=14% Similarity=0.119 Sum_probs=141.0
Q ss_pred CCCC---CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEE
Q 019868 124 YIYP---DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVK 196 (334)
Q Consensus 124 ~~Yp---~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~ 196 (334)
+.|. ++....|++.++.+.+ ..+.|++ +++++++..++.+++++||+|++++|.|+.+.. .++..|+++..
T Consensus 56 y~YsR~gnPt~~~Le~~la~le~-~~~~v~~-sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~ 133 (395)
T PRK05967 56 YTYGTRGTPTTDALCKAIDALEG-SAGTILV-PSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY 133 (395)
T ss_pred CccCCCCChHHHHHHHHHHHHhC-CCCEEEE-CcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence 4454 3345579999988776 2344555 556899999999999999999999999998764 34668999988
Q ss_pred eeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcE
Q 019868 197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (334)
Q Consensus 197 v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~ 275 (334)
++.. +.+.++++++ +++|+|++++|+||+|.+.+.+++.++++. ++++|+|++|.....- .+. +.+..
T Consensus 134 vd~~-----~~e~l~~al~-~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~-~pl----~~GaD 202 (395)
T PRK05967 134 YDPE-----IGAGIAKLMR-PNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLYF-RPL----DFGVD 202 (395)
T ss_pred eCCC-----CHHHHHHhcC-cCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCceec-Chh----HcCCC
Confidence 8632 3578999987 689999999999999999999999999987 9999999999753321 111 23556
Q ss_pred EEEcCCchhhc-ccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 276 IVLRTFSKRAG-LAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 276 i~i~S~SK~~g-l~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
+++.|.+|.++ -.+...|+++.+++.++.+...... ..+++...+.+...|+
T Consensus 203 ivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~ 257 (395)
T PRK05967 203 ISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLR 257 (395)
T ss_pred EEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc
Confidence 99999999753 3457788888888776666533322 3456665555544443
No 216
>PLN02509 cystathionine beta-lyase
Probab=99.72 E-value=3e-16 Score=153.02 Aligned_cols=191 Identities=17% Similarity=0.204 Sum_probs=138.7
Q ss_pred CCCCC---cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEE
Q 019868 124 YIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVK 196 (334)
Q Consensus 124 ~~Yp~---~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~ 196 (334)
+.|.. +....|.+.+|++.+ .++.++++|+++++..++. ++++||+|++++|.|+.+.. .....|++++.
T Consensus 125 ~~Y~r~gnpt~~aLE~~lA~leg--~e~ai~~~SG~aAi~~il~-ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~ 201 (464)
T PLN02509 125 YDYTRSGNPTRDALESLLAKLDK--ADRAFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKR 201 (464)
T ss_pred CccCCCCCHHHHHHHHHHHHHhC--CCEEEEeCcHHHHHHHHHH-HhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEE
Confidence 45643 335678888888877 4567777888889877664 78999999999999998763 34468999988
Q ss_pred eeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcE
Q 019868 197 VPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNL 275 (334)
Q Consensus 197 v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~ 275 (334)
++. .|+++++++++ +++|+|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+. ..+.+
T Consensus 202 vd~-----~d~e~l~~ai~-~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~-~pl----~~gaD 270 (464)
T PLN02509 202 VNT-----TNLDEVAAAIG-PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLS-RPL----ELGAD 270 (464)
T ss_pred eCC-----CCHHHHHHhCC-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccC-Chh----hcCCc
Confidence 863 37899999996 689999999999999999999999999987 9999999998644321 111 22346
Q ss_pred EEEcCCchhhcccc-cchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 276 IVLRTFSKRAGLAG-LRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 276 i~i~S~SK~~gl~G-~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
++++|++|.++-+| .-.|+++++ +.+.+.+...+.. ..+++...+++...|+.
T Consensus 271 ivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~t 327 (464)
T PLN02509 271 IVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT 327 (464)
T ss_pred EEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhh
Confidence 99999999876433 335777764 4454544333222 34566666666666553
No 217
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.72 E-value=8.3e-16 Score=145.27 Aligned_cols=170 Identities=18% Similarity=0.186 Sum_probs=135.7
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC-CCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS-DFS 204 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~-~~~ 204 (334)
..+...+++++++++++. +++++++|+++++..++..+ +++||+|+++.++|..+...+...|++++.++.+. ++.
T Consensus 16 ~~~~~~~~~~~la~~~~~--~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 93 (352)
T cd00616 16 LGPKVREFEKAFAEYLGV--KYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYN 93 (352)
T ss_pred CCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCC
Confidence 455688999999999995 46888889999999999988 58999999999999999888889999999999665 788
Q ss_pred CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCCc
Q 019868 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~S 282 (334)
+|++++++.++ +++++|+++ |++|...+.+++.++++. ++++|+|++|..... ..... +.. ..+.+.||+
T Consensus 94 ~d~~~l~~~i~-~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~---~~~-~d~~~~S~~ 165 (352)
T cd00616 94 IDPELIEAAIT-PRTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKV---GTF-GDAGAFSFH 165 (352)
T ss_pred cCHHHHHHhcC-cCCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEc---ccC-cceeEEcCC
Confidence 99999999996 689999976 479999999999999987 999999999975432 11111 111 236777776
Q ss_pred --hhhcccccchheeEcC-HHHHHHHHHh
Q 019868 283 --KRAGLAGLRVGYGAFP-LSIIEYLWRA 308 (334)
Q Consensus 283 --K~~gl~G~R~G~l~~~-~~~i~~l~~~ 308 (334)
|.+ ++.+.|+++.+ +++++.+...
T Consensus 166 ~~K~~--~~~~gg~~~~~~~~~~~~~~~~ 192 (352)
T cd00616 166 PTKNL--TTGEGGAVVTNDEELAERARLL 192 (352)
T ss_pred CCCCC--cccCceEEEECCHHHHHHHHHH
Confidence 876 44456888875 5777766543
No 218
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.71 E-value=7.9e-16 Score=149.81 Aligned_cols=198 Identities=15% Similarity=0.125 Sum_probs=143.6
Q ss_pred eecCCCCCCCCCC------HHHHHHHhcCcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-----
Q 019868 98 VKIDANENPYGPP------PEVREALGQLKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV----- 166 (334)
Q Consensus 98 i~l~~~~~~~~~~------~~v~~al~~~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l----- 166 (334)
..|+.|+++.+.. +++.+....+.....+..+...+|++++|++++.+ ++++++|+++++..++.++
T Consensus 26 ~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~~~G~~~~~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~ 103 (438)
T PRK15407 26 KPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWLTTGRFNDAFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKL 103 (438)
T ss_pred ccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcccCChhHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhccc
Confidence 3467777655432 23333333232212122234689999999999964 7899999999999988866
Q ss_pred ----cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 167 ----LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 167 ----~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
+++||+|+++.++|..+...+...|++++.++.+ +++.+|++.++++++ +++++|++++ ++|...+.+++.
T Consensus 104 ~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~-~~tkaVi~~~---~~G~p~dl~~I~ 179 (438)
T PRK15407 104 GDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVS-PKTKAIMIAH---TLGNPFDLAAVK 179 (438)
T ss_pred cccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcC-cCCeEEEEeC---CCCChhhHHHHH
Confidence 4789999999999999999999999999999864 578899999999997 6899999876 467778999999
Q ss_pred HHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEcCC--chhhcccccchheeEcC-HHHHHHHHH
Q 019868 242 KILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF--SKRAGLAGLRVGYGAFP-LSIIEYLWR 307 (334)
Q Consensus 242 ~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~--SK~~gl~G~R~G~l~~~-~~~i~~l~~ 307 (334)
++++. +++||+|++|+... +.+......+ .+.+.|| +|.+. +|. .|+++++ +++.+.++.
T Consensus 180 ~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g----d~~~fSf~~~k~~~-~ge-GG~l~t~d~~l~~~~~~ 244 (438)
T PRK15407 180 AFCDKHNLWLIEDNCDALGSTYDGRMTGTFG----DIATLSFYPAHHIT-MGE-GGAVFTNDPLLKKIIES 244 (438)
T ss_pred HHHHHCCCEEEEECccchhhhcCCeeeeccC----ceEEEeCCCCCCcc-ccC-ceEEEECCHHHHHHHHH
Confidence 99987 99999999998765 2332222222 2566677 56664 354 4898885 455555443
No 219
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.71 E-value=4.5e-16 Score=150.14 Aligned_cols=227 Identities=15% Similarity=0.125 Sum_probs=153.2
Q ss_pred CCCCCeeecCCCCCCCC---CCHHHHHHHhc-CcC---CC-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~---~~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++..++|+..+..... ..|++.+++.+ +.. .. .++.....+|.+.++++.+. +.+++++++++++..++
T Consensus 38 ~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al 115 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTGS--HKVLPMNSGAEAVETAI 115 (401)
T ss_pred CCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHHH
Confidence 35677899876643333 26888887765 321 11 12334467899999998874 58999999999999999
Q ss_pred HHhcC---------CC-CEEEEcCCCChhHHHHHHHCCC-------------eEEEeeCCCCCCCCHHHHHHhcccCCce
Q 019868 164 RCVLD---------PG-DKIVDCPPTFTMYEFDAAVNGA-------------AVVKVPRKSDFSLNVELIADAVEREKPK 220 (334)
Q Consensus 164 ~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~G~-------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~ 220 (334)
+.+.. +| ++|++..-.|......+...+. .+..++ ..|++.+++.+. ++++
T Consensus 116 ~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~le~~i~-~~~~ 189 (401)
T PRK00854 116 KAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-----FGDAEALEAAIT-PNTV 189 (401)
T ss_pred HHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-----CCCHHHHHHHhC-CCeE
Confidence 87642 23 6777777766543322222221 222232 137899999997 6899
Q ss_pred EEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh-hcCCCcEEEEcCCchhhcccccchhe
Q 019868 221 CIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGY 294 (334)
Q Consensus 221 ~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~ 294 (334)
+|++++|+||+|.+++ .+++.++++. ++++|+||+|.++...+..... .......+++ ++|.++...+|+||
T Consensus 190 aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~--~~K~l~gg~~~ig~ 267 (401)
T PRK00854 190 AFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL--IGKALSGGFYPVSA 267 (401)
T ss_pred EEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEE--ecccccCCccCeEE
Confidence 9999999999999997 5555556665 9999999999877554321111 1111112333 47988744479999
Q ss_pred eEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868 295 GAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 295 l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~ 328 (334)
+++++++++.+..... .++.+++.++++.++|+.
T Consensus 268 v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~ 303 (401)
T PRK00854 268 VLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKV 303 (401)
T ss_pred EEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999987764332 266799999999998853
No 220
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=3.1e-16 Score=152.32 Aligned_cols=158 Identities=18% Similarity=0.223 Sum_probs=127.1
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH----HHHHHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY----EFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~G~~v~~v~~~~~ 202 (334)
+++....|++.+|++.|.+ ..++++++++++..++.+++++||+|+++.+.|... ...+...|++++.++.
T Consensus 61 ~~p~~~~le~~lA~l~g~~--~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~--- 135 (427)
T PRK05994 61 TNPTNAVLEERVAALEGGT--AALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA--- 135 (427)
T ss_pred CCccHHHHHHHHHHHhCCC--cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC---
Confidence 4555788999999999865 477778888999999999999999999999999843 3445678999998874
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
.|++.++++++ +++++|++++|+||||.+.+.+++.++++. ++++|+|++|...... .+. ..+-.+++.|+
T Consensus 136 --~d~~~l~~ai~-~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~pl----~~gaDivv~S~ 207 (427)
T PRK05994 136 --DDPASFERAIT-PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RPI----EHGADIVVHSL 207 (427)
T ss_pred --CCHHHHHHhcC-cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-Ccc----ccCCcEEEEcC
Confidence 27899999997 689999999999999999999999999987 9999999999732211 111 23455999999
Q ss_pred chhhcccccchheeEc
Q 019868 282 SKRAGLAGLRVGYGAF 297 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~ 297 (334)
+|.+|-+|-.+|.+++
T Consensus 208 tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 208 TKFLGGHGNSMGGIIV 223 (427)
T ss_pred ccccCCCCCcEEEEEE
Confidence 9988766655665444
No 221
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.71 E-value=7e-16 Score=147.83 Aligned_cols=173 Identities=15% Similarity=0.110 Sum_probs=134.7
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFS 204 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~ 204 (334)
..+...+||++++++++.+ +.++++|+++++..++.++ +++||+|+++.++|..+...+...|++++.++.+ +++.
T Consensus 27 ~g~~~~~le~~la~~~g~~--~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 104 (380)
T TIGR03588 27 QGPTVPAFEEALAEYVGAK--YAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGN 104 (380)
T ss_pred CChhHHHHHHHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCC
Confidence 4556889999999999974 5666778899999999988 7899999999999999988888999999999963 4678
Q ss_pred CCHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEc
Q 019868 205 LNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 205 ~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~ 279 (334)
+|++++++.+++ +++++|++ .|++|...+.+++.++++. +++||+|++++... +++...... ..-.+.+.
T Consensus 105 ~d~~~l~~~i~~~~~~~t~~v~~---~~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~--~~~d~~~~ 179 (380)
T TIGR03588 105 IDEDALEKKLAAAKGKLPKAIVP---VDFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNC--RYADATVF 179 (380)
T ss_pred cCHHHHHHHhhcccCCCceEEEE---eCCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCc--cccceEEE
Confidence 999999999963 47888885 4578999999999999987 99999999998653 222222210 01247777
Q ss_pred CCc--hhhcccccchheeEc-CHHHHHHHHHh
Q 019868 280 TFS--KRAGLAGLRVGYGAF-PLSIIEYLWRA 308 (334)
Q Consensus 280 S~S--K~~gl~G~R~G~l~~-~~~~i~~l~~~ 308 (334)
||+ |.++. | ..|+++. ++++.++++..
T Consensus 180 S~~~~K~~~~-~-~GG~v~~~~~~~~~~~~~~ 209 (380)
T TIGR03588 180 SFHPVKIITT-A-EGGAVTTNDEELAERMRLL 209 (380)
T ss_pred ecCCCCcccc-c-CceEEEECCHHHHHHHHHH
Confidence 775 87753 3 4677776 56777766543
No 222
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.71 E-value=5e-16 Score=148.59 Aligned_cols=230 Identities=14% Similarity=0.126 Sum_probs=157.5
Q ss_pred CCCCCeeecCCC--CCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhc
Q 019868 92 RKPEDIVKIDAN--ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~ 167 (334)
.++..++|+..| ...++..|++.+++.+ +.....++.....++++++++.+.-.++ .++++++++++...+++...
T Consensus 26 ~dg~~~lD~~s~~~~~~lG~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar 105 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLGFHPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIAR 105 (375)
T ss_pred CCCCEEEECCCCcccccCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHH
Confidence 356778999766 4456778889988876 3332334444456788899987643444 36888999999998887542
Q ss_pred --CCCCEEEEcCCCChhHH-HHHHHCCCeEE---------EeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 168 --DPGDKIVDCPPTFTMYE-FDAAVNGAAVV---------KVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 168 --~~gd~Vl~~~p~y~~~~-~~~~~~G~~v~---------~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
.++++|+..+..|.... ......|.+.. .++.. . ..|++.+++.+. +++.+|++..++|++|...
T Consensus 106 ~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~dl~~l~~~l~-~~~a~vi~e~v~~~~G~~~ 182 (375)
T PRK04260 106 KATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA-I-FNDLNSVKALVN-KNTAAVMLELVQGESGVLP 182 (375)
T ss_pred HhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe-C-CCCHHHHHHhcC-CCeEEEEECCeECCCCCcC
Confidence 45678888888876432 23222222111 01100 0 138899999886 5778999999999999987
Q ss_pred c----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868 236 N----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 236 ~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
+ .+++.++++. ++++|+||+|.++...+.... .....+. +.||||.++ +|+|+||+++++++.+.+...
T Consensus 183 ~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~~~~~~~~~~~ 258 (375)
T PRK04260 183 ADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAKSSLGGAFGYG 258 (375)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCC---EEEeccccc-CCcceEEEEEcHHHHhhcCCC
Confidence 6 4666666765 999999999988764432222 1122222 338999998 899999999999998877643
Q ss_pred c--CCCCCcHHHHHHHHHHhcC
Q 019868 309 K--QPYNVSVAAEVAACAALQN 328 (334)
Q Consensus 309 ~--~~~~~~~~~q~aa~~~L~~ 328 (334)
. ..++.+++.+.++.++|+.
T Consensus 259 ~~~~t~~~~~~~~~aa~a~l~~ 280 (375)
T PRK04260 259 SHGSTFGGNKLSMAAASATLDI 280 (375)
T ss_pred CCCCCCCcCHHHHHHHHHHHHH
Confidence 2 2367799999999999843
No 223
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=7.6e-16 Score=147.34 Aligned_cols=232 Identities=16% Similarity=0.165 Sum_probs=152.7
Q ss_pred CCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCC--CCCCEEEeCCHHHHHHHHHHH
Q 019868 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~--~~~~I~~t~G~~~~i~~~~~~ 165 (334)
.+++.++|+..|.. .++ .+|++.+++.+ ++...........++++++++++.- ..+.+++++++++++..+++.
T Consensus 26 ~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~ 105 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKL 105 (377)
T ss_pred CCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHH
Confidence 45678899988752 233 56888888765 3321112222345677777777642 135899999999999999984
Q ss_pred hc-CCC-CEEEEcCCCChhHHHH-HHHCCCeEE---EeeCCCC--C--CCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 166 VL-DPG-DKIVDCPPTFTMYEFD-AAVNGAAVV---KVPRKSD--F--SLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 166 l~-~~g-d~Vl~~~p~y~~~~~~-~~~~G~~v~---~v~~~~~--~--~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
.. .+| ++|++.++.|...... ....|.... ..+...+ + .-|++.+++.+. +++++|++..+++++|...
T Consensus 106 a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~~ii~e~i~~~~G~~~ 184 (377)
T PRK02936 106 ARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMN-EEVAAVMLEVVQGEGGVIP 184 (377)
T ss_pred HHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhcc-CCeEEEEEecccCCCCCcc
Confidence 32 234 6799998888743222 222222110 0010000 0 117899999886 6789999998899998874
Q ss_pred -cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868 236 -NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 236 -~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
+.+.+++|.+ . ++++|+||+|.+|...+.... .....+. +.+|||.++ +|+|+||+++++++++.+...
T Consensus 185 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~d---i~t~sK~l~-~G~~ig~v~~~~~~~~~~~~~ 260 (377)
T PRK02936 185 ADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD---IVTVAKGLG-NGIPVGAMIGKKELGTAFGPG 260 (377)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCc---EEEEccccc-CCCccEEEEEcHHHHhhccCC
Confidence 6566655554 4 999999999988765433221 1111122 236999999 999999999999999887644
Q ss_pred cC--CCCCcHHHHHHHHHHhcC
Q 019868 309 KQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 309 ~~--~~~~~~~~q~aa~~~L~~ 328 (334)
.. .++.++++|+++.++|+.
T Consensus 261 ~~~~t~~~~~~~~aaa~a~l~~ 282 (377)
T PRK02936 261 SHGSTFGGNPLAMAAAKEVLQV 282 (377)
T ss_pred CCCCCCCCCHHHHHHHHHHHHH
Confidence 33 267899999999999864
No 224
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.70 E-value=7.1e-16 Score=148.95 Aligned_cols=225 Identities=16% Similarity=0.217 Sum_probs=147.8
Q ss_pred CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+++.++|+..| ...++ .+|++.+++.+ +... ..+......+|.+.|++..+ .+.++++++++++...++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~~~~sGseA~e~a~ 114 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDATF--AERVFFANSGAEANEAAF 114 (403)
T ss_pred CCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhCC--CCEEEEeCchHHHHHHHH
Confidence 457778999765 33343 56888887765 3221 11122234578888888765 358999999999999998
Q ss_pred HHhc--------CCCCEEEEcCCCChhHHH-HHHHCC------------CeEEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868 164 RCVL--------DPGDKIVDCPPTFTMYEF-DAAVNG------------AAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (334)
Q Consensus 164 ~~l~--------~~gd~Vl~~~p~y~~~~~-~~~~~G------------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i 222 (334)
+... ...++|+..+-.|..... .....| .+++.++. -|++.+++.+. +++++|
T Consensus 115 klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~aai 188 (403)
T PRK05093 115 KLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----NDLAAVKAVID-DHTCAV 188 (403)
T ss_pred HHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----CCHHHHHHHhc-CCeEEE
Confidence 8431 123567777766654322 222111 12222321 17899999886 578888
Q ss_pred EEeCCCCccccCC--cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868 223 FLTSPNNPDGSII--NDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 223 ~l~~p~NPtG~~~--~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
+++ |.||+|.++ +.+.+++|++ . ++++|+||+|.++.+.+..... ...+-..-+.||||.++ +|+|+||++
T Consensus 189 iie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~-~~~~~~pdi~s~sK~l~-~G~rig~vv 265 (403)
T PRK05093 189 VVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAY-MHYGVTPDILTSAKALG-GGFPIGAML 265 (403)
T ss_pred EEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhh-hhcCCCCCEEEeccccc-CCcceEEEE
Confidence 877 888887765 6666666554 3 9999999999988654432211 11111111568999999 999999999
Q ss_pred cCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 297 FPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 297 ~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
+++++++.+..... .++.+++.|+++.++|+
T Consensus 266 ~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~ 298 (403)
T PRK05093 266 TTAEIASHFKVGTHGSTYGGNPLACAVAEAVFD 298 (403)
T ss_pred EcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99999988865333 36789999999888553
No 225
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.70 E-value=2.3e-15 Score=145.84 Aligned_cols=208 Identities=17% Similarity=0.117 Sum_probs=148.2
Q ss_pred CCCeeecCCCCC-CCCCCHHHHHHHhc-C-cCCCCC-------CCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 94 PEDIVKIDANEN-PYGPPPEVREALGQ-L-KFPYIY-------PDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~~~~Y-------p~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++++|+.|+. .+...|+++++..+ + .++.+. ... -..+|.++||++++.+ ..++.+.+..+...+
T Consensus 101 ~r~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e--~all~sSGy~AN~~~ 178 (476)
T PLN02955 101 FKKLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKE--DCLVCPTGFAANMAA 178 (476)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCC--cEEEECChHHHHHHH
Confidence 457899988754 67778888876554 2 122111 111 1368999999999953 445555555555555
Q ss_pred HHHh--------------cCCCCEEEEcCCCChhHHHHHHHC----CCeEEEeeCCCCCCCCHHHHHHhccc--CCceEE
Q 019868 163 MRCV--------------LDPGDKIVDCPPTFTMYEFDAAVN----GAAVVKVPRKSDFSLNVELIADAVER--EKPKCI 222 (334)
Q Consensus 163 ~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i 222 (334)
+.++ .+++|.|+...-.|......++.. +++++.++.. |+++|++.++. .+.++|
T Consensus 179 i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~V 253 (476)
T PLN02955 179 MVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKVV 253 (476)
T ss_pred HHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCceEE
Confidence 5555 245677888888888888777765 5777777642 78888887753 234566
Q ss_pred EEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCc---hhhhc-CCCcEEEEcCCchhhcccccchheeEc
Q 019868 223 FLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESR---MEWVK-KHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~---~~~~~-~~~~~i~i~S~SK~~gl~G~R~G~l~~ 297 (334)
++....+++|.+.+.+++.+|++. +.++|+||+|..+..++.- ....+ ..+.+++++||||.+|+.| ||+++
T Consensus 254 v~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~g 330 (476)
T PLN02955 254 VTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIAC 330 (476)
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceeec
Confidence 656779999999999999999987 9999999999987754321 11111 2477899999999987777 99999
Q ss_pred CHHHHHHHHHhcCC
Q 019868 298 PLSIIEYLWRAKQP 311 (334)
Q Consensus 298 ~~~~i~~l~~~~~~ 311 (334)
++++++.+......
T Consensus 331 s~~~~~~l~~~~~~ 344 (476)
T PLN02955 331 SKKWKQLIQSRGRS 344 (476)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999998876665
No 226
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.70 E-value=7.7e-16 Score=142.08 Aligned_cols=205 Identities=18% Similarity=0.240 Sum_probs=136.7
Q ss_pred CCC-CC-cChHHHHHHHHHhcCCCCCCEEEeCCHH-HHHHHHHH-Hhc--CC----------CCEEEEcCCCChhHHHHH
Q 019868 124 YIY-PD-PESRRLRAALAKDSGLESDHILVGCGAD-ELIDLIMR-CVL--DP----------GDKIVDCPPTFTMYEFDA 187 (334)
Q Consensus 124 ~~Y-p~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~-~~i~~~~~-~l~--~~----------gd~Vl~~~p~y~~~~~~~ 187 (334)
+.| +. .|.+++|+.+|+.+|++++||++...++ ..+..++. +++ .. .-+.++|.|+|.-+-.+.
T Consensus 62 RNY~G~l~Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~ 141 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT 141 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH
T ss_pred cCCCCccCChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH
Confidence 678 43 4899999999999999999999965554 33333322 221 11 237899999999999999
Q ss_pred HHCCCeEEEeeCCCCCCCCHHHHHHhcc-cCCceEEEEe-CCCCccccCCcHHHHHHHHhC-----CCeEEEccCCcC--
Q 019868 188 AVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLT-SPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTE-- 258 (334)
Q Consensus 188 ~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~-----~~~lIvDeay~~-- 258 (334)
+.+|++.+.||+.++ ++|+|.+++.+. .+.+|.|++. --.||||.+++.|.+++++.. +..|+.|++|.-
T Consensus 142 E~~Giemi~VpM~~d-GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHh 220 (425)
T PF12897_consen 142 EHFGIEMIPVPMTED-GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHH 220 (425)
T ss_dssp HHCT-EEEEEEEETT-EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-B
T ss_pred HhhCcEEEecCCCCC-CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEee
Confidence 999999999997655 899999999984 4678888865 458999999999999999975 899999999954
Q ss_pred ccCCCCc---hhh------hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 259 FSGLESR---MEW------VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 259 ~~~~~~~---~~~------~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
+..+... ... .+..++++...|.||. ..+|-+++++.++++.++.+.+.... .+..-+.|..-...|+
T Consensus 221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~ 299 (425)
T PF12897_consen 221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFK 299 (425)
T ss_dssp SSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHH
T ss_pred ccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhc
Confidence 4322211 111 2457899999999995 46999999999999999988877654 5677788888888887
Q ss_pred Cch
Q 019868 328 NPI 330 (334)
Q Consensus 328 ~~~ 330 (334)
|.+
T Consensus 300 d~~ 302 (425)
T PF12897_consen 300 DAE 302 (425)
T ss_dssp SHH
T ss_pred Chh
Confidence 744
No 227
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=1e-15 Score=148.73 Aligned_cols=158 Identities=15% Similarity=0.173 Sum_probs=128.9
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~ 202 (334)
..+...+|++.+|++.|.+ ..++++++++++.+++.+++++||+|+++...|...... +...|++++.++.+
T Consensus 62 ~~p~~~~le~~lA~l~g~~--~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~-- 137 (433)
T PRK08134 62 SNPTVAVLEERVAALEGGV--GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG-- 137 (433)
T ss_pred cChHHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC--
Confidence 4556789999999999965 478899999999999998999999999999999754333 34589999998753
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
|+++++++++ +++|+|++.+|+||+|.+.+.+++.++++. ++++|+|.++.-.... .+. ..+-.+++.|.
T Consensus 138 ---d~~~l~~~i~-~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~-~pl----~~GaD~vv~S~ 208 (433)
T PRK08134 138 ---DIDGWRAAIR-PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLL-RPF----EHGADLVYHSA 208 (433)
T ss_pred ---CHHHHHHhcC-CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccC-Cch----hcCCCEEEecc
Confidence 7999999997 689999999999999999999999999987 9999999998632221 111 33456999999
Q ss_pred chhhcccccchheeEc
Q 019868 282 SKRAGLAGLRVGYGAF 297 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~ 297 (334)
+|.++-+|-.+|.+++
T Consensus 209 tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 209 TKFLGGHGTAIGGVLV 224 (433)
T ss_pred ccccCCCCCceEEEEE
Confidence 9988767766666654
No 228
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.69 E-value=1.1e-15 Score=150.73 Aligned_cols=202 Identities=19% Similarity=0.179 Sum_probs=148.1
Q ss_pred ecCCCCCCCCCCHHHHHHHhcC---cCCCCC-CC---cChH----HHHHHHHHhcCCCCCCEEEeCCHHHHHHHH--HH-
Q 019868 99 KIDANENPYGPPPEVREALGQL---KFPYIY-PD---PESR----RLRAALAKDSGLESDHILVGCGADELIDLI--MR- 164 (334)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~---~~~~~Y-p~---~g~~----~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~--~~- 164 (334)
-++.|+..+..+|.+.+++.+. ...+.| |. .|.. ++++.+++++|++...+..++|+.+.+..+ ++
T Consensus 72 ~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~ 151 (481)
T PRK04366 72 FYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRA 151 (481)
T ss_pred eecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHH
Confidence 3667778888888888887653 122445 22 2443 456666777788755666677777666543 22
Q ss_pred HhcCCCC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC-CcHHH
Q 019868 165 CVLDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDED 239 (334)
Q Consensus 165 ~l~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-~~~~~ 239 (334)
.+.++|| +|++++|.|+.|...++..|++++.++.+.++.+|+++++++++ +++++|++++|| |||.+ .+.++
T Consensus 152 ~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~i~-~~t~~V~v~~Pn-~tG~~~~dl~e 229 (481)
T PRK04366 152 YHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVG-EDTAALMLTNPN-TLGLFERNILE 229 (481)
T ss_pred HhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhhcc-cCCeEEEEeCCC-CccccchHHHH
Confidence 3456776 99999999999999999999999999987778999999999997 689999999998 99976 36777
Q ss_pred HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHHHH
Q 019868 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~~l 305 (334)
+.++++. +.++++|.++....... . .....+-++++++.+|.|+.| |..+|++.+.+++.+.+
T Consensus 230 I~~~a~~~gal~iVD~a~~~~~~g~--~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~l 297 (481)
T PRK04366 230 IAEIVHEAGGLLYYDGANLNAILGK--A-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFL 297 (481)
T ss_pred HHHHHHHcCCEEEEEecChhhhccc--C-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhC
Confidence 7777776 89999999984221110 1 122445679999999988744 56688998888777655
No 229
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.68 E-value=1e-15 Score=146.09 Aligned_cols=172 Identities=22% Similarity=0.238 Sum_probs=142.6
Q ss_pred hHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHh---cCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCCC
Q 019868 131 SRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCV---LDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~~ 202 (334)
..++|+.+++++|+++ ++|++++|++.+++.++..+ +++||+|++..-.|+... ...+..|+++..++.+.+
T Consensus 45 ~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~ 124 (371)
T PF00266_consen 45 LEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG 124 (371)
T ss_dssp HHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT
T ss_pred HHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc
Confidence 4589999999999998 89999999999999999998 789999999999987544 445578999999987666
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
..+|++++++.++ +++++|++++.+|-||...+.+++.++++. ++++++|.+++-.... -.+.+.+-++++.|.
T Consensus 125 ~~~~~~~~~~~l~-~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~----id~~~~~~D~~~~s~ 199 (371)
T PF00266_consen 125 GSLDLEDLEEALN-PDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVP----IDLDELGADFLVFSS 199 (371)
T ss_dssp SSCSHHHHHHHHH-TTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS------TTTTTESEEEEES
T ss_pred chhhhhhhhhhhc-cccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccc----ccccccccceeeecc
Confidence 7899999999997 899999999999999999999999999987 9999999998743321 112234556899999
Q ss_pred chhhcccccchheeEcCHHHHHHHHHhc
Q 019868 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
.|.+|.+| +|+++++++.++.+....
T Consensus 200 ~Kl~gp~G--~g~l~v~~~~~~~~~p~~ 225 (371)
T PF00266_consen 200 HKLGGPPG--LGFLYVRPEAIERLRPAK 225 (371)
T ss_dssp TSTTSSST--EEEEEEEHHHHHHHHTSS
T ss_pred cccCCCCc--hhhheehhhhhhcccccc
Confidence 99445444 799999999999885433
No 230
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.68 E-value=8e-15 Score=140.08 Aligned_cols=223 Identities=12% Similarity=0.042 Sum_probs=143.7
Q ss_pred CCCeeecCCCCC-CCCCCHHHHHHHhc-C-cC--------CCCCC------Cc-ChHHHHHHHHHhcCCCCCCEEEeCCH
Q 019868 94 PEDIVKIDANEN-PYGPPPEVREALGQ-L-KF--------PYIYP------DP-ESRRLRAALAKDSGLESDHILVGCGA 155 (334)
Q Consensus 94 ~~~~i~l~~~~~-~~~~~~~v~~al~~-~-~~--------~~~Yp------~~-g~~~lr~~lA~~~~~~~~~I~~t~G~ 155 (334)
..++++|+.|+. ++...+.+.++..+ + .+ .+... .. -..++|+.+|++++.+ +.+++++|.
T Consensus 3 ~~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~-~~l~~~sG~ 81 (370)
T PRK05937 3 ESLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAP-EAFIVPSGY 81 (370)
T ss_pred CCceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCC-eEEEECChH
Confidence 356789988754 66666666654432 1 11 11111 11 2578999999999974 347777877
Q ss_pred HHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCc
Q 019868 156 DELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNP 230 (334)
Q Consensus 156 ~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NP 230 (334)
...+ .+...+.++||.|++..-.|......++......+.++ ..|++++++.++. +++.+|++++++|+
T Consensus 82 ~a~~-~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~ 155 (370)
T PRK05937 82 MANL-GLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-----HNDLDHLESLLESCRQRSFGRIFIFVCSVYSF 155 (370)
T ss_pred HHHH-HHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-----CCCHHHHHHHHHhhhccCCCcEEEEEecCCCC
Confidence 6544 45555567888888877788776666665444444443 3578988888762 23557778899999
Q ss_pred cccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCch---hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRM---EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~---~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
+|.+.+.+++.++++. ++++++||+|.......... ......+..+++.||||.+|..| +.++..+++.+.+.
T Consensus 156 ~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~ 232 (370)
T PRK05937 156 KGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLM 232 (370)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHH
Confidence 9999999999999987 99999999998643221111 11111122367899999998777 33555666666555
Q ss_pred HhcCC----CCCcHHHHHHHHHHh
Q 019868 307 RAKQP----YNVSVAAEVAACAAL 326 (334)
Q Consensus 307 ~~~~~----~~~~~~~q~aa~~~L 326 (334)
....+ .+.+++...++.+++
T Consensus 233 ~~~~~~~~s~~~~~~~~~a~~aal 256 (370)
T PRK05937 233 LNSPPLRYSTGLPPHLLISIQVAY 256 (370)
T ss_pred HhCCCCeecCCCCHHHHHHHHHHH
Confidence 33333 235566555444444
No 231
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.68 E-value=3e-15 Score=144.32 Aligned_cols=232 Identities=13% Similarity=0.090 Sum_probs=151.6
Q ss_pred CCCCCeeecCCCCCCCC---CCHHHHHHHhcC-c-CCC--C-CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDANENPYG---PPPEVREALGQL-K-FPY--I-YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~~-~-~~~--~-Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++..++|+..|..... .+|++.+++.+. . ..+ . +.......+++.++++.+. +.++++++++++...++
T Consensus 28 ~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SGs~A~e~al 105 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLFGY--DKVLPMNSGAEAGETAL 105 (400)
T ss_pred CCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCCCC--CEEEEeCCcHHHHHHHH
Confidence 35677899977644333 468888887752 2 111 1 1223456788888888764 57889999999999999
Q ss_pred HHhc----------CCCCEEEEcCCCChhHHHHH-HHCCCeEEE---eeCCCC----CCCCHHHHHHhcccCCceEEEEe
Q 019868 164 RCVL----------DPGDKIVDCPPTFTMYEFDA-AVNGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 164 ~~l~----------~~gd~Vl~~~p~y~~~~~~~-~~~G~~v~~---v~~~~~----~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
+... ..+++|+..+-.|....... ...+..... .+...+ ...|++++++.++.+++++|++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~e 185 (400)
T PTZ00125 106 KFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVE 185 (400)
T ss_pred HHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEc
Confidence 8653 13477888877776443322 222211100 000000 11389999999864578999998
Q ss_pred CCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh-hcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 226 ~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
.++||||.+++ .+++.++++. ++++|+||+|.++...+..... .......++ ++||.++.+++|+||+++++
T Consensus 186 p~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~--~~sK~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 186 PIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIV--LLGKALSGGLYPISAVLAND 263 (400)
T ss_pred CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEE--EEcccccCCCcCcEEEEEcH
Confidence 89999999997 5666666665 9999999999877543322111 111111233 47899985446999999999
Q ss_pred HHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 300 ~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
++++.+..... .++.+++.+.++.++|+
T Consensus 264 ~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~ 293 (400)
T PTZ00125 264 DVMLVIKPGEHGSTYGGNPLACAVAVEALE 293 (400)
T ss_pred HHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99988764332 36778899988877664
No 232
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=6.3e-15 Score=143.12 Aligned_cols=158 Identities=16% Similarity=0.163 Sum_probs=125.0
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSDF 203 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~~ 203 (334)
++....|++.+|++.|.+ ..+++++++.++..++.+++++||+|+++...|..... .+...|++++.++ +.
T Consensus 68 ~p~~~~Le~~lA~l~g~~--~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~-- 142 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV--AALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP-- 142 (436)
T ss_pred CchHHHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC--
Confidence 455789999999999964 46777777889999999999999999999988875443 2344788888885 21
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
.|+++++++++ +++++|++.+|+||+|.+.+.+++.++++. ++++|+|+++..... ..+. ..+-.+++.|++
T Consensus 143 -~d~e~l~~ai~-~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-~~pl----~~GaDivv~S~t 215 (436)
T PRK07812 143 -DDLDAWRAAVR-PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-IRPL----EHGADIVVHSAT 215 (436)
T ss_pred -CCHHHHHHhCC-CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CCch----hcCCCEEEEecc
Confidence 28999999997 689999999999999999999999999988 999999998863221 1111 234458889999
Q ss_pred hhhcccccchheeEc
Q 019868 283 KRAGLAGLRVGYGAF 297 (334)
Q Consensus 283 K~~gl~G~R~G~l~~ 297 (334)
|.+|-.|--+|++++
T Consensus 216 K~lgg~G~~i~G~vv 230 (436)
T PRK07812 216 KYLGGHGTAIAGVIV 230 (436)
T ss_pred cccCCCCCeEEEEEE
Confidence 998767666777666
No 233
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.67 E-value=3.2e-15 Score=140.69 Aligned_cols=169 Identities=19% Similarity=0.218 Sum_probs=139.6
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSL 205 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~ 205 (334)
.+-..+|.+++|+++|+. +.+.++++|.++.++++++ ++|||+|+++.-+|......+...|++++.++.+ +.+.+
T Consensus 33 G~~v~~FE~~~ae~~G~k--~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~ni 110 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVK--YAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNI 110 (374)
T ss_pred ChHHHHHHHHHHHHhCCC--eEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCC
Confidence 334789999999999964 7888888999999999966 5999999999999999999999999999999965 56999
Q ss_pred CHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCcc-CCCCchhhhcCCCcEEEEcCC--
Q 019868 206 NVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFS-GLESRMEWVKKHDNLIVLRTF-- 281 (334)
Q Consensus 206 d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~-~~~~~~~~~~~~~~~i~i~S~-- 281 (334)
|++.++++++ +++|+|+ |-+--|...+.+.|.+|++. +++||+|.+++..+ +.+.....++ .+.+.||
T Consensus 111 d~~~ie~aIt-~~tKAIi---pVhl~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~G----d~~~fSF~~ 182 (374)
T COG0399 111 DPDLIEAAIT-PRTKAII---PVHLAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFG----DIGAFSFHA 182 (374)
T ss_pred CHHHHHHHcc-cCCeEEE---EehhccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCccccccc----ceEEEEecC
Confidence 9999999998 6799999 66678999999999999998 99999999998765 3444433333 2667777
Q ss_pred chhhcccccchheeEc-CHHHHHHHHHh
Q 019868 282 SKRAGLAGLRVGYGAF-PLSIIEYLWRA 308 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~-~~~~i~~l~~~ 308 (334)
.|.++ +| -.|.++. ++++++.++..
T Consensus 183 ~K~it-tg-EGGav~tnd~ela~k~~~l 208 (374)
T COG0399 183 TKNLT-TG-EGGAVVTNDEELAEKARSL 208 (374)
T ss_pred CCCcc-cc-CceEEEeCCHHHHHHHHHH
Confidence 89887 44 4577777 56777776644
No 234
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=5.8e-15 Score=141.25 Aligned_cols=188 Identities=12% Similarity=0.043 Sum_probs=144.1
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~ 202 (334)
.+|....|.+.||++-|. +..+++++++.++..++.+++++||+|+++...|......+ +..|+++..++.
T Consensus 60 ~nPt~~~le~~la~LEg~--~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~--- 134 (395)
T PRK08114 60 GTLTHFSLQEAMCELEGG--AGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP--- 134 (395)
T ss_pred CChhHHHHHHHHHHHhCC--CeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC---
Confidence 456678899999998873 47888888999999999999999999999999997655443 558999998873
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC---CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM---PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~---~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
.|.+.++++++ +++|+|++.+|.||+|.+.|.+++.++++. ++++++|.++.-... ..+.+.+-.++++
T Consensus 135 --~d~~~l~~~l~-~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~~GaDivv~ 206 (395)
T PRK08114 135 --LIGADIAKLIQ-PNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALDFGIDISIQ 206 (395)
T ss_pred --CCHHHHHHhcC-CCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHHcCCcEEEE
Confidence 36789999997 689999999999999999999999999987 499999999964221 1112345569999
Q ss_pred CCchhhcccc-cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
|.+|.++-+| ...|.++.+++.++.+...... ..+++...+.+...|+
T Consensus 207 S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~ 257 (395)
T PRK08114 207 AGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLR 257 (395)
T ss_pred cCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCC
Confidence 9999765443 6778777788776666543332 3456666555544444
No 235
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.64 E-value=7.6e-15 Score=141.94 Aligned_cols=229 Identities=16% Similarity=0.192 Sum_probs=153.6
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..+++.++|+..+ .+.++ ..|++.+++.+ +.. ...|..+...+|.+.|++..+ .+.+++++++++++..+
T Consensus 35 d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~~~~sGseA~e~A 112 (406)
T PRK12381 35 DQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAA 112 (406)
T ss_pred eCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEcCCcHHHHHHH
Confidence 3457788998664 23333 36888888765 322 122333345678888888775 46999999999999999
Q ss_pred HHHhc--------CCCCEEEEcCCCChhHHHHHHHCCCeEEE------eeC--CCCCCCCHHHHHHhcccCCceEEEEeC
Q 019868 163 MRCVL--------DPGDKIVDCPPTFTMYEFDAAVNGAAVVK------VPR--KSDFSLNVELIADAVEREKPKCIFLTS 226 (334)
Q Consensus 163 ~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~------v~~--~~~~~~d~~~l~~~l~~~~~~~i~l~~ 226 (334)
++... ....+|+..+..|......+...+..... ++. ......|++.+++.++ +++++|++ .
T Consensus 113 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavii-E 190 (406)
T PRK12381 113 LKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALID-DQTCAVIV-E 190 (406)
T ss_pred HHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhcc-CCeeEEEE-e
Confidence 98542 13478888899887665433332221100 000 0001237899999886 57777777 6
Q ss_pred CCCccccCC--cHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcC
Q 019868 227 PNNPDGSII--NDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 227 p~NPtG~~~--~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~ 298 (334)
|.|++|-++ +.+.+++|.+. ++++|+||+|.++...+.... ..+. ... +.||||.+| +|+|+||++++
T Consensus 191 Pv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v-~pD--i~t~sK~l~-gG~~ig~~~~~ 266 (406)
T PRK12381 191 PIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPD--VLTTAKALG-GGFPIGAMLTT 266 (406)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCC-CCC--EEEehhhhh-CCCceEEEEEc
Confidence 999998765 67777776654 999999999988754433221 1111 111 358999998 89999999999
Q ss_pred HHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 299 LSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 299 ~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
+++++.+..... .++.+++.++++.++|+
T Consensus 267 ~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~ 297 (406)
T PRK12381 267 EKCASVMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_pred HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999998865333 36779999999888553
No 236
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.63 E-value=8.1e-15 Score=137.12 Aligned_cols=195 Identities=18% Similarity=0.155 Sum_probs=150.3
Q ss_pred eecCCCCCCCCCCHHHHHHHhcC-cC--C-----CCCCC---cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868 98 VKIDANENPYGPPPEVREALGQL-KF--P-----YIYPD---PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~~-~~--~-----~~Yp~---~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l 166 (334)
|.|+.+.. .++.|++.+++... .. + +.|+. ...++.|+.+|+.+|+++++|++|+|+||+.++++...
T Consensus 3 iYlD~~AT-Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 3 IYLDNAAT-TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGA 81 (386)
T ss_pred cccccccc-CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhh
Confidence 44544332 34568888877542 11 1 22321 12468999999999999999999999999999999873
Q ss_pred --c----CCCCEEEEcCCCChhHHHHHHHC---CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcH
Q 019868 167 --L----DPGDKIVDCPPTFTMYEFDAAVN---GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIND 237 (334)
Q Consensus 167 --~----~~gd~Vl~~~p~y~~~~~~~~~~---G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~ 237 (334)
. +.|..|+++.-.|+...+.++.. |.+|.++|.+.++.+|+++|+++++ +++.+|.+...||.||.+.|.
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~-~~T~LVSim~aNnE~G~IQpI 160 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-PDTILVSIMHANNETGTIQPI 160 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcC-CCceEEEEEecccCeeecccH
Confidence 2 25789999999999877766654 9999999988889999999999998 689999999999999999999
Q ss_pred HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 238 EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 238 ~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+++.++++. ++++.+|.++.-. ...-.+....-++...|-.|.+|.-| +|.+++.+.
T Consensus 161 ~ei~~i~k~~~i~fHvDAvQa~G----kipi~~~~~~vD~ls~SaHK~~GpkG--iGaLyv~~~ 218 (386)
T COG1104 161 AEIGEICKERGILFHVDAVQAVG----KIPIDLEELGVDLLSFSAHKFGGPKG--IGALYVRPG 218 (386)
T ss_pred HHHHHHHHHcCCeEEEehhhhcC----ceeccccccCcceEEeehhhccCCCc--eEEEEECCC
Confidence 999999997 9999999998632 11111222234578889999888777 788887543
No 237
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.62 E-value=3.1e-14 Score=137.24 Aligned_cols=227 Identities=17% Similarity=0.184 Sum_probs=149.8
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++++++|+..| ...++ ..|++.+++.+ +.. ...|+.....+|.+.|+++.+. +.++++++++++...+
T Consensus 31 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A 108 (397)
T TIGR03246 31 DQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDATFA--DKVFFCNSGAEANEAA 108 (397)
T ss_pred eCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCCC--CEEEEeCCcHHHHHHH
Confidence 3467789999775 33343 46888888765 322 1233434456888888888763 5899999999999999
Q ss_pred HHHhc--------CCCCEEEEcCCCChhHH-HHHHHCCC------------eEEEeeCCCCCCCCHHHHHHhcccCCceE
Q 019868 163 MRCVL--------DPGDKIVDCPPTFTMYE-FDAAVNGA------------AVVKVPRKSDFSLNVELIADAVEREKPKC 221 (334)
Q Consensus 163 ~~~l~--------~~gd~Vl~~~p~y~~~~-~~~~~~G~------------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~ 221 (334)
++... ...++|+..+-.|.... ......|. .+..++. .|++.+++.+. +++++
T Consensus 109 lk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~-~~~aa 182 (397)
T TIGR03246 109 LKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-----NDLAAAKALIS-DKTCA 182 (397)
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-----CCHHHHHHHhc-cCeEE
Confidence 98541 12356777776665443 22232222 1122221 27899999986 57888
Q ss_pred EEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE
Q 019868 222 IFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 222 i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
|+++.++++.|... +.+.+++|.+ . ++++|+||+|.++...+..... ...+-..-+-++||.+| .|+|+||++
T Consensus 183 vi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~-~~~gv~pDi~t~~K~lg-gG~pigav~ 260 (397)
T TIGR03246 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAY-MHYGVTPDILTSAKALG-GGFPIGAML 260 (397)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhh-hhcCCCCCEEEeehhhh-CCcceeEEE
Confidence 88886666666554 6666666654 3 9999999999877543322111 11111112337999998 899999999
Q ss_pred cCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 297 FPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 297 ~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
+++++++.+..... .++.++++++++.++|+
T Consensus 261 ~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 261 TTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLD 293 (397)
T ss_pred EcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99999888764322 36678899998888885
No 238
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.61 E-value=1.8e-14 Score=137.60 Aligned_cols=189 Identities=21% Similarity=0.213 Sum_probs=137.0
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~~ 202 (334)
.++....|++.||++.+. +.++++++++.++..++.+++++||.|+++...|......++ ..|.++..++.
T Consensus 53 gnPt~~~le~~la~Le~g--~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~--- 127 (386)
T PF01053_consen 53 GNPTVRALEQRLAALEGG--EDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP--- 127 (386)
T ss_dssp C-HHHHHHHHHHHHHHT---SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST---
T ss_pred ccccHHHHHHHHHHhhcc--cceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc---
Confidence 455577899999999885 578999999999999999999999999999999986655444 47999988863
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-C-CeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~-~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
-|+++++++++ +++++|++.+|.||+..+.+.+.+.++++. + +++|+|+.+.....- .++ ..+.++++.|
T Consensus 128 --~d~~~l~~~l~-~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~~-~pL----~~GaDivv~S 199 (386)
T PF01053_consen 128 --TDLEALEAALR-PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYNQ-NPL----ELGADIVVHS 199 (386)
T ss_dssp --TSHHHHHHHHC-TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTTC--GG----GGT-SEEEEE
T ss_pred --hhHHHHHhhcc-ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceeee-ccC----cCCceEEEee
Confidence 37899999998 699999999999999999999999999987 7 999999999643221 122 2234599999
Q ss_pred Cchhhcccc-cchheeEcC--HHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 281 FSKRAGLAG-LRVGYGAFP--LSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 281 ~SK~~gl~G-~R~G~l~~~--~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
.+|.++-.| .=.|.++++ +++.+.++..... ..+++...+.....|+.
T Consensus 200 ~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T 252 (386)
T PF01053_consen 200 ATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRT 252 (386)
T ss_dssp TTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT
T ss_pred ccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCc
Confidence 999875233 335777764 4777766655443 34566655555555543
No 239
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.60 E-value=8.7e-14 Score=134.66 Aligned_cols=193 Identities=16% Similarity=0.043 Sum_probs=142.6
Q ss_pred HHHHHHHHHhcCCCC-CCEEEeCCHH-HHHHHHHHHhcC---CCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCC
Q 019868 132 RRLRAALAKDSGLES-DHILVGCGAD-ELIDLIMRCVLD---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDF 203 (334)
Q Consensus 132 ~~lr~~lA~~~~~~~-~~I~~t~G~~-~~i~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~ 203 (334)
.+|.+.+++++|++. +..++++|++ .++.+++.++-. +||+|+++.-+|......+...|++++.++. +++|
T Consensus 108 ~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~ 187 (444)
T TIGR03531 108 NKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDEL 187 (444)
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCC
Confidence 478888888899853 4588888888 577777765542 5899999999999999999999999999983 5679
Q ss_pred CCCHHHHHHhcccC--CceEEEEeCCC-CccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhh---cCCC-cE
Q 019868 204 SLNVELIADAVERE--KPKCIFLTSPN-NPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV---KKHD-NL 275 (334)
Q Consensus 204 ~~d~~~l~~~l~~~--~~~~i~l~~p~-NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~---~~~~-~~ 275 (334)
.+|++++++++++. +..++++++|+ +++|..-+.+++.++++. ++++|+|++|+.... ...... ...+ -.
T Consensus 188 ~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--~~~~~~~~g~~~Grad 265 (444)
T TIGR03531 188 TTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--KYMELINKAIKVGRVD 265 (444)
T ss_pred CcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--hhhhhhhccccccCCC
Confidence 99999999999731 55677777775 566678889999999887 999999999985331 111111 0111 25
Q ss_pred EEEcCCchhhcccccchheeE-c-CHHHHHHHHHhcCCCCCcHHHHHHHHHHhcC
Q 019868 276 IVLRTFSKRAGLAGLRVGYGA-F-PLSIIEYLWRAKQPYNVSVAAEVAACAALQN 328 (334)
Q Consensus 276 i~i~S~SK~~gl~G~R~G~l~-~-~~~~i~~l~~~~~~~~~~~~~q~aa~~~L~~ 328 (334)
+++.|++|.+.++|+ |+++ + ++++++.+.+.......+.+.|.+...++.-
T Consensus 266 ~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~ 318 (444)
T TIGR03531 266 AVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSL 318 (444)
T ss_pred eEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHh
Confidence 778899999988877 5544 6 7788888876543333455677776666653
No 240
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.60 E-value=4.4e-14 Score=136.62 Aligned_cols=197 Identities=17% Similarity=0.118 Sum_probs=137.5
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC-c---CC--CC-CC--C--cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL-K---FP--YI-YP--D--PESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~-~---~~--~~-Yp--~--~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+++.|+.+... +.|+.+.+++.+. . .. .. +. . ....+.++++ +++|+++++|++++|++++++.++
T Consensus 26 ~~~iyld~~a~g-~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~~~~~v~~~~~~t~~l~~~~ 103 (406)
T TIGR01814 26 NAVIYLDGNSLG-LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLVGAKEDEVVVMNTLTINLHLLL 103 (406)
T ss_pred CCcEEecCCCcC-cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-cccCCCCCcEEEeCCchHHHHHHH
Confidence 457899866644 3467777776541 1 10 11 11 1 1122333445 789999999999999999999999
Q ss_pred HHhcCCC---CEEEEcCCCChh--H--HHHHHHCCCeE----EEeeCCCCCCCCHHHHHHhcc--cCCceEEEEeCCCCc
Q 019868 164 RCVLDPG---DKIVDCPPTFTM--Y--EFDAAVNGAAV----VKVPRKSDFSLNVELIADAVE--REKPKCIFLTSPNNP 230 (334)
Q Consensus 164 ~~l~~~g---d~Vl~~~p~y~~--~--~~~~~~~G~~v----~~v~~~~~~~~d~~~l~~~l~--~~~~~~i~l~~p~NP 230 (334)
..+++++ +.|++....|+. + ...++..|+++ +.++.++++.+|++.+++.++ .+++++|++++++|.
T Consensus 104 ~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~ 183 (406)
T TIGR01814 104 ASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYY 183 (406)
T ss_pred HHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccc
Confidence 9887664 368888889986 2 23445678887 456655556789999988774 257899999999999
Q ss_pred cccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh-cccccchheeEcCHH
Q 019868 231 DGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA-GLAGLRVGYGAFPLS 300 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~-gl~G~R~G~l~~~~~ 300 (334)
||...+.+++.++++. ++++++|++++..... -.+...+-.+++.|..|.+ |-+| |.+++.++
T Consensus 184 tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~----id~~~~gvD~~~~s~hK~l~g~pG---~~l~v~~~ 248 (406)
T TIGR01814 184 TGQLFDMAAITRAAHAKGALVGFDLAHAVGNVP----LDLHDWGVDFACWCTYKYLNAGPG---AGAFVHEK 248 (406)
T ss_pred cceecCHHHHHHHHHHcCCEEEEEcccccCCcc----cccccCCCCEEEEcCccccCCCCC---eEEEEehh
Confidence 9999999999999997 9999999998753221 1122345569999999965 3334 44554333
No 241
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.60 E-value=2.6e-14 Score=139.00 Aligned_cols=235 Identities=12% Similarity=0.073 Sum_probs=146.7
Q ss_pred CCCCCCeeecCCCCCC--CC-CCHHHHHHHhc-CcC-CCCC-C---CcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANENP--YG-PPPEVREALGQ-LKF-PYIY-P---DPESRRLRAALAKDSGLES-DHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~~--~~-~~~~v~~al~~-~~~-~~~Y-p---~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~ 160 (334)
..+++.++|+..|... ++ .+|++.+++.+ +.. .+.+ + .+...++-+.+++..+.+. +.+++++++++++.
T Consensus 37 d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e 116 (425)
T PRK08088 37 DVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVE 116 (425)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 3467778999776433 33 36788877765 221 1111 2 2233455556666555432 46666666667666
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEE----------------EeeCCCCCCCC----HHHHHHhcc---
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVV----------------KVPRKSDFSLN----VELIADAVE--- 215 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~----------------~v~~~~~~~~d----~~~l~~~l~--- 215 (334)
..++... ....+|+...++|......+...+.... .+|.+.+ ..+ ++.+++.++
T Consensus 117 ~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~~ 195 (425)
T PRK08088 117 NAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKNDA 195 (425)
T ss_pred HHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhcc
Confidence 6665332 2235566668988766544444332211 1221111 122 456777764
Q ss_pred -cCCceEEEEe-CCCCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc
Q 019868 216 -REKPKCIFLT-SPNNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (334)
Q Consensus 216 -~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G 289 (334)
.++..+|++. ..+|+.+...+.+.+++|.++ ++++|+||+|.++...+... .....+.+..+.||||.++ +|
T Consensus 196 ~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~~~pdi~s~sK~l~-~G 273 (425)
T PRK08088 196 APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMGVAADLTTFAKSIA-GG 273 (425)
T ss_pred CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcCCCCCEEEEecccc-CC
Confidence 2456677766 446776667777777777664 99999999999876543322 1122233455789999998 99
Q ss_pred cchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 290 LRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 290 ~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|+||+++++++++.+...... ++.+++.|+++.++|+.
T Consensus 274 ~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~ 314 (425)
T PRK08088 274 FPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKV 314 (425)
T ss_pred CcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 9999999999999988654433 67899999999999975
No 242
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.57 E-value=1e-13 Score=130.15 Aligned_cols=189 Identities=20% Similarity=0.185 Sum_probs=148.3
Q ss_pred CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCC
Q 019868 126 YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKS 201 (334)
Q Consensus 126 Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~ 201 (334)
++.+....+.+.+++..|.. +.++.++++.++..++..|+..|+.|++.+..|......++ ..|++...++.+
T Consensus 74 ~~nPt~~~le~~iaal~ga~--~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~- 150 (409)
T KOG0053|consen 74 SGNPTRDVLESGIAALEGAA--HALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD- 150 (409)
T ss_pred CCCCchHHHHHHHHHHhCCc--eEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh-
Confidence 35566778999999999854 58888888889999999999999999999999986555443 478888887643
Q ss_pred CCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 202 DFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 202 ~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
|+++++++++ +++++|++.+|.||++.+.+.+++.++++. ++++|+|+.+.....- .++ ..+.+|+++|
T Consensus 151 ----~~~~~~~~i~-~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~~-~pL----~lGADIV~hS 220 (409)
T KOG0053|consen 151 ----DLKKILKAIK-ENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYNQ-DPL----PLGADIVVHS 220 (409)
T ss_pred ----hHHHHHHhhc-cCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCccccc-Chh----hcCCCEEEEe
Confidence 6789999997 589999999999999999999999999998 9999999999865321 122 2345699999
Q ss_pred Cchhhc-ccccchheeEcC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 281 FSKRAG-LAGLRVGYGAFP-LSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 281 ~SK~~g-l~G~R~G~l~~~-~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
.+|.+| -...=.|.++.+ +++.+.+...+.. ++.+++.......-|+
T Consensus 221 aTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 221 ATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred eeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHHHHHHHhcCcc
Confidence 999885 334556777775 8888888776654 6677776655544443
No 243
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.57 E-value=5.9e-14 Score=136.36 Aligned_cols=158 Identities=16% Similarity=0.183 Sum_probs=122.7
Q ss_pred CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHCCCeEEEeeCCCCC
Q 019868 128 DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE----FDAAVNGAAVVKVPRKSDF 203 (334)
Q Consensus 128 ~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~G~~v~~v~~~~~~ 203 (334)
.+....|++.+|++.|. .+.|++++|+ .++..++..++++||+|+++...|.... ..+...|++++.++. .
T Consensus 68 ~pt~~~le~~la~l~g~-~~~v~fsSG~-~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~-~-- 142 (437)
T PRK05613 68 NPTVEALENRIASLEGG-VHAVAFASGQ-AAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVEN-P-- 142 (437)
T ss_pred ChHHHHHHHHHHHHhCC-CeEEEeCCHH-HHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECC-C--
Confidence 44578899999999986 3456666666 7777888888899999999999998653 344668999999872 2
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
.|++.++++++ +++++|++.++.||+|.+.+.+++.++++. ++++|+|.++..... .... ..+-.+++.|++
T Consensus 143 -~d~e~l~~~l~-~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~----~~GaDivv~S~~ 215 (437)
T PRK05613 143 -DDPESWQAAVQ-PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPL----ELGADVVVASLT 215 (437)
T ss_pred -CCHHHHHHhCC-ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChH----HhCCCEEEeecc
Confidence 27899999997 679999999999999999999999999987 999999999864322 1111 223469999999
Q ss_pred hhhcccccchheeEc
Q 019868 283 KRAGLAGLRVGYGAF 297 (334)
Q Consensus 283 K~~gl~G~R~G~l~~ 297 (334)
|.++-.|--+|-+++
T Consensus 216 K~l~G~gd~~gG~vv 230 (437)
T PRK05613 216 KFYTGNGSGLGGVLI 230 (437)
T ss_pred ceecCCCcceeEEEE
Confidence 987755555555444
No 244
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.56 E-value=8.6e-14 Score=132.63 Aligned_cols=188 Identities=18% Similarity=0.187 Sum_probs=136.4
Q ss_pred cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCCCCC
Q 019868 129 PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDFSLN 206 (334)
Q Consensus 129 ~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~~~d 206 (334)
+...+|++++++++|. ++++.+++++.++.+++.++ +++||+|+++.-+|......+...|++++.++.+ +++.+|
T Consensus 25 ~~~~~fE~~~a~~~g~--~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id 102 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGV--KYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNID 102 (363)
T ss_dssp HHHHHHHHHHHHHHTS--SEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-
T ss_pred HHHHHHHHHHHHHhCC--CeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcC
Confidence 3478999999999994 58999999999999999987 4799999999999999999999999999999965 789999
Q ss_pred HHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcCCCcEEEEcCC--c
Q 019868 207 VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKKHDNLIVLRTF--S 282 (334)
Q Consensus 207 ~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~~~~~i~i~S~--S 282 (334)
++.++++++ +++|+|++. +.-|...+.+++.++++. |++||+|.+++..+. .+......+ .+.+.|| +
T Consensus 103 ~~~~~~~i~-~~t~ai~~~---h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~g----d~~~fSf~~~ 174 (363)
T PF01041_consen 103 PEALEKAIT-PKTKAILVV---HLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFG----DIAIFSFHPT 174 (363)
T ss_dssp HHHHHHHHH-TTEEEEEEE----GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSS----SEEEEESSTT
T ss_pred HHHHHHHhc-cCccEEEEe---cCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCC----CceEecCCCC
Confidence 999999998 788999955 567888899999999987 999999999987652 232222222 3677777 6
Q ss_pred hhhcccccchheeEc-CHHHHHHHHHhcCC-------------------CCCcHHHHHHHHHHhcC
Q 019868 283 KRAGLAGLRVGYGAF-PLSIIEYLWRAKQP-------------------YNVSVAAEVAACAALQN 328 (334)
Q Consensus 283 K~~gl~G~R~G~l~~-~~~~i~~l~~~~~~-------------------~~~~~~~q~aa~~~L~~ 328 (334)
|.+. +| ..|.+++ ++++.++++.++.. +.++.+..+.+..-|+.
T Consensus 175 K~i~-~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~ 238 (363)
T PF01041_consen 175 KIIT-TG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKR 238 (363)
T ss_dssp SSS--SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHT
T ss_pred CCCc-CC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHH
Confidence 8764 33 3488887 46777777765431 23556666666666654
No 245
>PLN02624 ornithine-delta-aminotransferase
Probab=99.56 E-value=2.6e-13 Score=133.55 Aligned_cols=227 Identities=14% Similarity=0.151 Sum_probs=151.3
Q ss_pred CCCCCCeeecCCCCCCCC---CCHHHHHHHhc-CcC---C-CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDANENPYG---PPPEVREALGQ-LKF---P-YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~~---~-~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++..++|+..|.-... ..|++.+++++ +.. . ..|..+...+|.+.++++++. +.++++++++++...+
T Consensus 71 d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~~~--~~~~f~~SGseA~e~A 148 (474)
T PLN02624 71 DPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMFGY--DMVLPMNTGAEGVETA 148 (474)
T ss_pred ECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhcCC--CeEEEeCChHHHHHHH
Confidence 446778899977643332 36888888775 221 1 223444567899999998863 5899999999999999
Q ss_pred HHHhcC---------CCC-EEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCCCCCCHHHHHHhccc--C
Q 019868 163 MRCVLD---------PGD-KIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVER--E 217 (334)
Q Consensus 163 ~~~l~~---------~gd-~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~d~~~l~~~l~~--~ 217 (334)
++.... +++ +|+...-+|......+...... +..++. -|++.+++.++. .
T Consensus 149 lklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~ 223 (474)
T PLN02624 149 IKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-----GDLDALEKIFEEDGD 223 (474)
T ss_pred HHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-----CCHHHHHHHHHhCCC
Confidence 873321 133 5666666665443222221111 122221 267888888853 4
Q ss_pred CceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhccccc
Q 019868 218 KPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGL 290 (334)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G~ 290 (334)
++.+|++..++|++|.+++ .+++.++++. ++++|+||+|.+|...+..... .+.... ++ +|||.+|.+++
T Consensus 224 ~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pD-iv--~lsK~lggG~~ 300 (474)
T PLN02624 224 RIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPD-VV--ILGKALGGGVI 300 (474)
T ss_pred CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCC-EE--EecccccCCCC
Confidence 5788999999999999998 5566666665 9999999999877544332221 111122 22 36899997779
Q ss_pred chheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 291 RVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 291 R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
++|++++++++++.+.+... .++.+++.+.++.++|+
T Consensus 301 pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe 339 (474)
T PLN02624 301 PVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQ 339 (474)
T ss_pred cceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 99999999988887654332 35788999999988875
No 246
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.56 E-value=2e-13 Score=132.86 Aligned_cols=231 Identities=17% Similarity=0.125 Sum_probs=152.5
Q ss_pred CCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 92 RKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 92 ~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
.++..++|+..|.. .++ .+|.+.+++.+ ++.. ..++.....+|.+.|++.+. ..+.+++++++++++..+++.
T Consensus 47 ~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~la~~L~~~~~-~~~~v~~~~sGseA~e~Aik~ 125 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRL 125 (426)
T ss_pred CCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHHHHHHHHHhCC-CCCEEEEecCHHHHHHHHHHH
Confidence 45778999987753 233 56888888765 3222 22355567789999988764 356899999999999999996
Q ss_pred hcC--CCCEEEEcCCCChhHHHHHHHC-C------------CeEEEeeCC--CCCCCCHHHHHHhccc--CCceEEEEeC
Q 019868 166 VLD--PGDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRK--SDFSLNVELIADAVER--EKPKCIFLTS 226 (334)
Q Consensus 166 l~~--~gd~Vl~~~p~y~~~~~~~~~~-G------------~~v~~v~~~--~~~~~d~~~l~~~l~~--~~~~~i~l~~ 226 (334)
... .+++|+..++.|..+...+... | .....++.. .-..-|++.+++.+.. .++.+|++..
T Consensus 126 a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEp 205 (426)
T PRK00062 126 ARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEP 205 (426)
T ss_pred HHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeC
Confidence 432 3578999999998775333221 1 000000000 0001278888887752 3567788774
Q ss_pred CCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 227 PNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 227 p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
....+|.+.+ .+++.++++. ++++|+||+|.++..+... ....+..+ . +.+|||.++ .|+++|+++++++
T Consensus 206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~p-D--i~~~gK~l~-~G~p~ga~~~~~~ 281 (426)
T PRK00062 206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTP-D--LTTLGKIIG-GGLPVGAFGGRRE 281 (426)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCc-c--hHhhhhHhh-CCCcceeeeEHHH
Confidence 4444898887 4555666665 9999999999877432211 11111111 1 468999998 8999999999999
Q ss_pred HHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868 301 IIEYLWRAK-----QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 301 ~i~~l~~~~-----~~~~~~~~~q~aa~~~L~ 327 (334)
+++.+.... ..++.+++.++++.++|+
T Consensus 282 i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 282 IMEQLAPLGPVYQAGTLSGNPLAMAAGLATLK 313 (426)
T ss_pred HHHhhccCCCceecccCcCCHHHHHHHHHHHH
Confidence 999885321 225788999999888775
No 247
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.56 E-value=1.7e-13 Score=132.38 Aligned_cols=228 Identities=14% Similarity=0.108 Sum_probs=151.3
Q ss_pred CCCCCeeecCCCCCCCC---CCHHHHHHHhc-Cc-CCCC---CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDANENPYG---PPPEVREALGQ-LK-FPYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~~~~~~---~~~~v~~al~~-~~-~~~~---Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.++.+++|+..+..... ..|++.+++.+ +. .... +..+...+|.+.++++++. +.++++++++++...++
T Consensus 34 ~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai 111 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFGY--DKVLPMNTGAEAVETAI 111 (401)
T ss_pred CCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcCC--CEEEEeCccHHHHHHHH
Confidence 35677899987644333 36888888765 22 1111 2233467899999999874 58999999999999999
Q ss_pred HHhc---------CC-CCEEEEcCCCChhH-HHHHHHCC------------CeEEEeeCCCCCCCCHHHHHHhccc--CC
Q 019868 164 RCVL---------DP-GDKIVDCPPTFTMY-EFDAAVNG------------AAVVKVPRKSDFSLNVELIADAVER--EK 218 (334)
Q Consensus 164 ~~l~---------~~-gd~Vl~~~p~y~~~-~~~~~~~G------------~~v~~v~~~~~~~~d~~~l~~~l~~--~~ 218 (334)
+... .+ .++|+...-.|... .......| ..+..++. .|++++++.+++ .+
T Consensus 112 ~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 112 KLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-----NNLEALEEALEDHGPN 186 (401)
T ss_pred HHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-----CCHHHHHHHHHhcCCC
Confidence 8642 13 35677777776542 22222222 11233332 268888887752 35
Q ss_pred ceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh-hcCCCcEEEEcCCchhhcccccch
Q 019868 219 PKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW-VKKHDNLIVLRTFSKRAGLAGLRV 292 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~-~~~~~~~i~i~S~SK~~gl~G~R~ 292 (334)
..+|++..+++++|...+ .+++.++++. ++++|+||+|..+...+..... .......++ ++||.++..|+|+
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~--~~gK~l~~g~~~i 264 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIV--LLGKALSGGVYPV 264 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEE--EeeccccCCCCCc
Confidence 668888888999999997 5666667765 9999999999877543322111 111112233 4789998666999
Q ss_pred heeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868 293 GYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 293 G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~ 328 (334)
|++++++++++.+..... .++.+++++.++.++|+.
T Consensus 265 g~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~ 302 (401)
T TIGR01885 265 SAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEV 302 (401)
T ss_pred EEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999988765222 356788999888888763
No 248
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.55 E-value=3.5e-13 Score=127.73 Aligned_cols=189 Identities=19% Similarity=0.181 Sum_probs=139.5
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH----HHHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF----DAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~G~~v~~v~~~~~ 202 (334)
.++....|.++++++-| .++.+.+++++.+|..++..++++||.|++++..|+.... ..+..|.++..++..
T Consensus 61 ~nPT~~~lE~~~a~LEg--~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~-- 136 (396)
T COG0626 61 GNPTRDALEEALAELEG--GEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG-- 136 (396)
T ss_pred CCccHHHHHHHHHHhhC--CCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC--
Confidence 45667889999999886 4578888999999999999999999999999998975443 344589999888642
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
+.+++++++.++++|+|++.+|.|||..+.|...+.++++. ++++|+|+.|....... ++ ..+.+|+++|.
T Consensus 137 ---~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~-PL----~~GaDIVvhSa 208 (396)
T COG0626 137 ---DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQR-PL----ELGADIVVHSA 208 (396)
T ss_pred ---ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCcccccccC-hh----hcCCCEEEEec
Confidence 44666766654589999999999999999999999999998 89999999997533321 11 33456999999
Q ss_pred chhhccc-ccchheeEcCH-HHHHHHHHhcC---CCCCcHHHHHHHHHHhc
Q 019868 282 SKRAGLA-GLRVGYGAFPL-SIIEYLWRAKQ---PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 282 SK~~gl~-G~R~G~l~~~~-~~i~~l~~~~~---~~~~~~~~q~aa~~~L~ 327 (334)
+|.++-. ..=.|.++++. ++.+.+..... ...+++...+.....|+
T Consensus 209 TKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk 259 (396)
T COG0626 209 TKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR 259 (396)
T ss_pred cccccCCcceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccc
Confidence 9987533 34456566554 55555522222 13456665555554444
No 249
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.54 E-value=5.2e-13 Score=130.35 Aligned_cols=234 Identities=18% Similarity=0.218 Sum_probs=147.3
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCCC-----CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..| ...++ .+|++.+++.+ +.....+ ..+...+|-+.|++..+..-+.+++++++++++..
T Consensus 37 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~ 116 (443)
T PRK08360 37 DIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDG 116 (443)
T ss_pred ECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHH
Confidence 4467889999776 44454 46888888765 3321111 22234566677777665434689999999999999
Q ss_pred HHHHhc--CCCCEEEEcCCCChhHHH-HHHHCCC------------eEEEeeCCCC----CC--------CCHHHHHHhc
Q 019868 162 IMRCVL--DPGDKIVDCPPTFTMYEF-DAAVNGA------------AVVKVPRKSD----FS--------LNVELIADAV 214 (334)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~G~------------~v~~v~~~~~----~~--------~d~~~l~~~l 214 (334)
+++.-. ....+|+...-.|..... .....|. .+..++..+. +. -+++.+++.+
T Consensus 117 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (443)
T PRK08360 117 AIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196 (443)
T ss_pred HHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHH
Confidence 988432 233567777766654322 1221221 1222331111 10 1234455555
Q ss_pred c----cCCceEEEEeCCCCccccCCc-HHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCch
Q 019868 215 E----REKPKCIFLTSPNNPDGSIIN-DEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSK 283 (334)
Q Consensus 215 ~----~~~~~~i~l~~p~NPtG~~~~-~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK 283 (334)
+ .+++.+|++.-.+||+|.+++ .+.++++ ++. ++++|+||+|.+|...+.... ..+..+.++ ++||
T Consensus 197 ~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii---tlsK 273 (443)
T PRK08360 197 EGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII---TLGK 273 (443)
T ss_pred HhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE---Eecc
Confidence 3 246788888755699999887 4445555 444 999999999998865433211 122223333 6799
Q ss_pred hhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868 284 RAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 284 ~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~ 328 (334)
.++ +|+|+||+++++++++.+..... .++.++++++++.++|+.
T Consensus 274 ~l~-~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 319 (443)
T PRK08360 274 PLG-GGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEE 319 (443)
T ss_pred ccc-CCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999 89999999999999988864432 366788999998888864
No 250
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.54 E-value=5.1e-13 Score=129.10 Aligned_cols=234 Identities=15% Similarity=0.171 Sum_probs=150.9
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCCC----CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPYI----YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~~----Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..+++.++|+..+ ...++ ..|++.+++.+ +..... +......+|-+.|.+..+. .+.++++++++++...+
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~-~~~v~f~~sGseA~e~A 114 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRF-AEKVFLCNSGTEANEAA 114 (408)
T ss_pred ECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCC-CCEEEEcCchHHHHHHH
Confidence 3467889999766 33344 46888888765 322111 2222234566666665542 26899999999999999
Q ss_pred HHHhcC----C----C-CEEEEcCCCChhHHHHHHH-CCCeEEE---eeCCCC----CCCCHHHHHHhcccCCceEEEEe
Q 019868 163 MRCVLD----P----G-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSD----FSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 163 ~~~l~~----~----g-d~Vl~~~p~y~~~~~~~~~-~G~~v~~---v~~~~~----~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
++.... . + .+|+....+|......+.. .|..... -+...+ .-.|++.+++.+. .+..+.++.
T Consensus 115 lklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~-~~~~aavi~ 193 (408)
T PRK04612 115 IKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMA-GGDVAAVML 193 (408)
T ss_pred HHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhC-CCCEEEEEE
Confidence 884321 1 2 4688888888654433322 2211100 000011 0127889998886 345566667
Q ss_pred CCCCccccCCc--HHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868 226 SPNNPDGSIIN--DEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 226 ~p~NPtG~~~~--~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
.|.+++|.+++ .+.+.+|.+ . ++++|+||+|.+|...+..... ...+....+.+|||.++ +|+|+||+++++
T Consensus 194 eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~-~~~~~~pdi~t~~K~l~-~G~piga~~~~~ 271 (408)
T PRK04612 194 EPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAH-WQEQVTPDIVTLAKALG-GGFPIGAMLAGP 271 (408)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhh-hhcCCCCCEEEEcchhc-CCCceEEEEECH
Confidence 78888887765 445555554 4 9999999999987654432222 13345677889999998 899999999999
Q ss_pred HHHHHHHHhcC--CCCCcHHHHHHHHHHhcC
Q 019868 300 SIIEYLWRAKQ--PYNVSVAAEVAACAALQN 328 (334)
Q Consensus 300 ~~i~~l~~~~~--~~~~~~~~q~aa~~~L~~ 328 (334)
++++.+..... .|+.+++++.++.++|+.
T Consensus 272 ~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~ 302 (408)
T PRK04612 272 KVAETMQFGAHGTTFGGNPLAAAVARVALRK 302 (408)
T ss_pred HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHH
Confidence 98887764332 367889999999988863
No 251
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.53 E-value=5e-13 Score=122.88 Aligned_cols=180 Identities=22% Similarity=0.286 Sum_probs=124.4
Q ss_pred CCCCCCcChHHHHHHHHHhcCCCCCCEEE---eCCHHHHHHHHHHHhcCCCCEEEE-cCCCChhHHHHHH----------
Q 019868 123 PYIYPDPESRRLRAALAKDSGLESDHILV---GCGADELIDLIMRCVLDPGDKIVD-CPPTFTMYEFDAA---------- 188 (334)
Q Consensus 123 ~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~---t~G~~~~i~~~~~~l~~~gd~Vl~-~~p~y~~~~~~~~---------- 188 (334)
+++|.|.|.+.|.+..|+.++.+. -++ -.++|++|...+..+++|||+.+. ...-|.......-
T Consensus 48 GYGY~D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~ 125 (403)
T PF06838_consen 48 GYGYDDIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLK 125 (403)
T ss_dssp TT-TT-HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTG
T ss_pred cCCCCCccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChH
Confidence 366678888999999999999642 233 246779999999999999999984 5556776666552
Q ss_pred HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC------CCeEEEccCCcCccC
Q 019868 189 VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSG 261 (334)
Q Consensus 189 ~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~ 261 (334)
-+|.+...++..+++.+|.+.++++++ +++|+|+|. +-..-+=..++.++++++++. ++++++|++|.+|..
T Consensus 126 e~Gi~Y~~v~L~~dg~~D~~~i~~~~~-~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE 204 (403)
T PF06838_consen 126 EFGIKYREVPLTEDGTIDWEAIKKALK-PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE 204 (403)
T ss_dssp GGT-EEEE--B-TTSSB-HHHHHHHHH-TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS
T ss_pred HhCceeEEEeecCCCCcCHHHHHHhhc-cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc
Confidence 267889999988888999999999998 789999998 555666667889999998874 899999999999997
Q ss_pred CCCchhhhcCCCcEEEEcCCchhhcccccc--hheeEcCHHHHHHHHHhcC
Q 019868 262 LESRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 262 ~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R--~G~l~~~~~~i~~l~~~~~ 310 (334)
...+... +.+++.+|+-|+-| .|+- .||+++.+++++.......
T Consensus 205 ~~EP~~v----GADl~aGSLIKNpG-GgiAptGGYIaGr~~lVe~~a~RLT 250 (403)
T PF06838_consen 205 TQEPTEV----GADLMAGSLIKNPG-GGIAPTGGYIAGRKDLVERAAYRLT 250 (403)
T ss_dssp SS-GGGG----T-SEEEEETTSGGG-TTT-SS-EEEEESHHHHHHHHHHHS
T ss_pred ccCcccc----chhheeccceeCCC-CCccCcCCEEechHHHHHHHHhhhc
Confidence 5444333 33499999999976 4432 4899999999998764443
No 252
>PRK04311 selenocysteine synthase; Provisional
Probab=99.50 E-value=3.2e-12 Score=124.85 Aligned_cols=191 Identities=18% Similarity=0.146 Sum_probs=137.6
Q ss_pred CCHHHHHHHhcCcCCC---CC--C--CcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868 109 PPPEVREALGQLKFPY---IY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (334)
Q Consensus 109 ~~~~v~~al~~~~~~~---~Y--p--~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~ 179 (334)
.++++.+++.+....+ .| . ..| ...+++.+++++|.+ +.+++++++.++.+++.+ +.+||+|++++..
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~~GdeVIvs~~e 174 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTGAE--DALVVNNNAAAVLLALNA-LAAGKEVIVSRGE 174 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hCCCCEEEEcchh
Confidence 4577888876531111 12 1 112 468999999999964 567778888999988865 5899999999864
Q ss_pred Ch----h--HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCc--cc--cCCcHHHHHHHHhC-CC
Q 019868 180 FT----M--YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP--DG--SIINDEDLLKILEM-PI 248 (334)
Q Consensus 180 y~----~--~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP--tG--~~~~~~~l~~l~~~-~~ 248 (334)
+. . ....+...|++++.++..+ ..++++++++++ +++++|++.+++|| +| ...+.+++.++++. ++
T Consensus 175 ~~~~ggs~~i~~~~~~~G~~l~~v~~~~--~t~~~dle~aI~-~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi 251 (464)
T PRK04311 175 LVEIGGAFRIPDVMRQAGARLVEVGTTN--RTHLRDYEQAIN-ENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL 251 (464)
T ss_pred hhhcCcchhhHHHHHHCCcEEEEECCCC--CCCHHHHHHhcC-ccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCC
Confidence 43 1 2345567899999997532 357999999997 68999999999998 34 67899999999988 99
Q ss_pred eEEEccCCcCcc----C---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868 249 LVVLDEAYTEFS----G---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (334)
Q Consensus 249 ~lIvDeay~~~~----~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~ 307 (334)
++|+|.+.+.+. + ..+........+-.++++|.+|.+| |...|++++++++++.+++
T Consensus 252 ~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~li~~l~~ 315 (464)
T PRK04311 252 PVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLG--GPQAGIIVGKKELIARLKK 315 (464)
T ss_pred eEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCccccc--CCceEEEEEcHHHHHHHhh
Confidence 999999643331 1 1111111123456799999999875 4468999999999987763
No 253
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.50 E-value=1.1e-12 Score=128.67 Aligned_cols=204 Identities=15% Similarity=0.049 Sum_probs=141.6
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhc-CcCCC--CCCCc----C------hH-HHHHHHHHhcCCCCCCEEEe---CCHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQ-LKFPY--IYPDP----E------SR-RLRAALAKDSGLESDHILVG---CGADE 157 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~-~~~~~--~Yp~~----g------~~-~lr~~lA~~~~~~~~~I~~t---~G~~~ 157 (334)
.+.|+|-..+|.. +|.+++++.. +...+ ++|.. | .+ ..|+.++++++.+++++.++ +|+++
T Consensus 34 ~~~l~l~~sen~~--s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~ 111 (452)
T PTZ00094 34 IEGLELIASENFT--SRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSP 111 (452)
T ss_pred HcCeeEecccccC--CHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHH
Confidence 4569998888865 5778888776 32212 33321 1 22 25678999999988887676 78889
Q ss_pred HHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH----------CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868 158 LIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV----------NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 158 ~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
+...++.+++++||+|++....|+.+...... .+.++..++.+.++.+|++++++.++..+++++++.
T Consensus 112 an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lvi~~-- 189 (452)
T PTZ00094 112 ANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLIIAG-- 189 (452)
T ss_pred HHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEEEEe--
Confidence 99999999999999999988787655432211 123344555555578999999999965567877764
Q ss_pred CCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHH
Q 019868 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l 305 (334)
++.+|...|.+++.++++. |+++++|+++.-.......... ...+..+++.|++|++ .|.+.|++++++++.+.+
T Consensus 190 ~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-~~~~~D~l~~S~hK~l--~GP~Gg~l~~~~~~~~~l 265 (452)
T PTZ00094 190 ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS-PFPYADVVTTTTHKSL--RGPRSGLIFYRKKVKPDI 265 (452)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC-CCCCCcEEEcCCccCC--CCCCceEEEEecccchHH
Confidence 3459999999999999987 9999999999654321111110 0113459999999976 345558888876655443
No 254
>PLN00144 acetylornithine transaminase
Probab=99.50 E-value=5.8e-13 Score=127.75 Aligned_cols=230 Identities=15% Similarity=0.162 Sum_probs=147.7
Q ss_pred CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+++.++|+..+. ..++ ..|++.+++.+ +... ..|......+|-+.|++..+ .+.|+++++++++...++
T Consensus 12 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~v~f~~sGseA~e~Al 89 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASSF--ADRVFFCNSGTEANEAAI 89 (382)
T ss_pred CCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcCC--CCeEEEeCCcHHHHHHHH
Confidence 4677889987663 3343 45888887765 3221 11223334566667766543 468999999999999998
Q ss_pred HHhc---C------C------CCEEEEcCCCChhHHHHHHHCCCe-------------EEEeeCCCCCCCCHHHHHHhcc
Q 019868 164 RCVL---D------P------GDKIVDCPPTFTMYEFDAAVNGAA-------------VVKVPRKSDFSLNVELIADAVE 215 (334)
Q Consensus 164 ~~l~---~------~------gd~Vl~~~p~y~~~~~~~~~~G~~-------------v~~v~~~~~~~~d~~~l~~~l~ 215 (334)
+... . + ..+|+...-+|......+...... +..+|. -|++.+++.+.
T Consensus 90 klAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~ 164 (382)
T PLN00144 90 KFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQ 164 (382)
T ss_pred HHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC-----CCHHHHHHhcC
Confidence 8432 1 0 246888888886554433322111 111211 26899998886
Q ss_pred cCCceEEEEeCCCCccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868 216 REKPKCIFLTSPNNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~ 288 (334)
..++++|++.-.+||.|... +. +++.++++. ++++|+||+|.+|...+.... ...-.+. +.+|||.++ +
T Consensus 165 ~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD---i~t~sK~l~-~ 240 (382)
T PLN00144 165 KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD---IMTLAKPLA-G 240 (382)
T ss_pred CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC---EEEeccccc-C
Confidence 56778888774488844433 23 344445554 999999999998865443222 1111111 778999997 8
Q ss_pred ccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHH---HHhcCchhh
Q 019868 289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAAC---AALQNPIYL 332 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~---~~L~~~~~~ 332 (334)
|+|+||+++++++.+.+... ...+..++++++++. ..++++++.
T Consensus 241 G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~ 289 (382)
T PLN00144 241 GLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFL 289 (382)
T ss_pred CcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHH
Confidence 99999999999999887532 233778999999999 555655543
No 255
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.49 E-value=1.2e-12 Score=125.14 Aligned_cols=186 Identities=15% Similarity=0.152 Sum_probs=132.0
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeEEEeeCCCC
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v~~v~~~~~ 202 (334)
..+...+|.+.++++.|.+ +.+++++++.++..++.+++++||+|+++.+.|.. +...+...|++++.++.++.
T Consensus 62 ~~P~~~~lE~~la~leg~~--~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAE--HALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred CChhHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 4556789999999999853 67788888899999999999999999998876653 33556668999999985421
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
..++ ++.+++++|++.+|.|||+.+.+.+++.++++. + +++|.++.-... ..+. ...-.+++.|.
T Consensus 140 ~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~-~~pl----~~gaDivv~S~ 205 (384)
T PRK06434 140 NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-QNPL----DLGADVVIHSA 205 (384)
T ss_pred hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCccc-CCch----hcCCCEEEeec
Confidence 1222 333478999999999999999999999999987 5 567999742211 1122 23456999999
Q ss_pred chhhcccc-cchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhcC
Q 019868 282 SKRAGLAG-LRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQN 328 (334)
Q Consensus 282 SK~~gl~G-~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~~ 328 (334)
+|.++-+| .=.|.+++ ++++.+.++..+.. ...+++..+.+..-|+.
T Consensus 206 tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~t 256 (384)
T PRK06434 206 TKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT 256 (384)
T ss_pred ccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCc
Confidence 99886434 33566666 55666766654322 44566665555555543
No 256
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=1.8e-12 Score=126.44 Aligned_cols=235 Identities=16% Similarity=0.141 Sum_probs=148.9
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.+||+..| ...++ .+|++.+++.+ ++. . ..|..+...+|.+.|+++.+-..+.++++++++++...
T Consensus 39 d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~ 118 (433)
T PRK08117 39 GVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEG 118 (433)
T ss_pred eCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence 3467788999776 33444 46888888765 321 1 12334446678888888874344689999999999999
Q ss_pred HHHHhc--CCCCEEEEcCCCChhHHHHHH-HCC--C-----------eEEEeeCCCCCC------------CCHHHHHHh
Q 019868 162 IMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNG--A-----------AVVKVPRKSDFS------------LNVELIADA 213 (334)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G--~-----------~v~~v~~~~~~~------------~d~~~l~~~ 213 (334)
+++... ....+|+..+-.|......+. ..+ . .+..+|..+.+. -|++.+++.
T Consensus 119 AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 198 (433)
T PRK08117 119 ALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESL 198 (433)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHH
Confidence 988422 223567777777765433221 111 0 112222111110 145566665
Q ss_pred ccc----CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh
Q 019868 214 VER----EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (334)
Q Consensus 214 l~~----~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (334)
+++ .++.+|++.......|.+.+ .+++.++++. ++++|+||+|.+|...+..... ...+...-+.+|||.
T Consensus 199 ~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~-~~~gv~pDi~t~sK~ 277 (433)
T PRK08117 199 FKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA-QTFGVVPDIMTIAKG 277 (433)
T ss_pred HHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhH-hhcCCCCCEeehhhh
Confidence 532 34667776655667788876 5566666665 9999999999987654332211 112222234699999
Q ss_pred hcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 285 AGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 285 ~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
+| .|+++|++++++++++.+..... .++.++++++++.++|+
T Consensus 278 lg-~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~ 321 (433)
T PRK08117 278 IA-SGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLE 321 (433)
T ss_pred cc-CCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 99 89999999999999887753322 26779999999998886
No 257
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.48 E-value=3.2e-12 Score=123.94 Aligned_cols=205 Identities=18% Similarity=0.114 Sum_probs=136.5
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC--c-CCCCC-------CCcChHHHHH----HHHHhcCCCCCCE-EEeCCHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL--K-FPYIY-------PDPESRRLRA----ALAKDSGLESDHI-LVGCGADELI 159 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~--~-~~~~Y-------p~~g~~~lr~----~lA~~~~~~~~~I-~~t~G~~~~i 159 (334)
.+.++|-..+|-. +|.+++++... . ++.+| ..+...+|.+ .+++++|.+ .. +.+++++.++
T Consensus 28 ~~~~~l~~sen~~--~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~--~alv~~~SG~~A~ 103 (416)
T PRK13034 28 QDHLELIASENFT--SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCD--YANVQPHSGSQAN 103 (416)
T ss_pred hcCeeecccccCC--CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCC--ceEEecCCcHHHH
Confidence 3458887777765 78888887753 1 22212 1233567777 999999965 45 4456778899
Q ss_pred HHHHHHhcCCCCEEEEcCCCChhH-HHHHHH--CCCeE--EEeeC-CCCCCCCHHHHHHhcccCCceEEEEeCCCCcccc
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTMY-EFDAAV--NGAAV--VKVPR-KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGS 233 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~--~G~~v--~~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~ 233 (334)
..++.+++++||+|+++...|... ..-++. .+... +.++. ..++.+|++++++.++..++++|++..+. +|.
T Consensus 104 ~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~--~g~ 181 (416)
T PRK13034 104 GAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA--YPR 181 (416)
T ss_pred HHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc--ccc
Confidence 999999999999999999988752 211111 12222 23332 23467899999998865578888876654 578
Q ss_pred CCcHHHHHHHHhC-CCeEEEccCCcCccCC-CCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhc
Q 019868 234 IINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAK 309 (334)
Q Consensus 234 ~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~ 309 (334)
..+.+++.++++. ++++|+|+++...... +.....+ ....++++|++|.++ |-..|++++++ ++.+.++...
T Consensus 182 ~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~--~~~Di~~~s~~K~l~--g~~GG~v~~~~~~~~~~~~~~~ 256 (416)
T PRK13034 182 ELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPF--PHAHVVTTTTHKTLR--GPRGGMILTNDEEIAKKINSAV 256 (416)
T ss_pred ccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCC--CCceEEEEeCcccCC--CCCCeEEEECcHHHHHHHHhhc
Confidence 8899999999987 9999999998754421 1111111 235699999999873 33348877755 4445554433
No 258
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.48 E-value=1.8e-12 Score=125.86 Aligned_cols=235 Identities=14% Similarity=0.067 Sum_probs=144.7
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CC---CCCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YI---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~---Yp~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~ 160 (334)
..+++.++|+..|. ..++ ..|++.+++++ +... .. ++.+...+|-+.|++...- ..+.+++++++++++.
T Consensus 29 D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e 108 (420)
T TIGR00700 29 DVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVE 108 (420)
T ss_pred eCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 34677889987663 3333 45788888765 3221 11 2333345677777776642 2368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC--------C-----eEEEeeCCCCCC-----------CCHHHHHHh
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG--------A-----AVVKVPRKSDFS-----------LNVELIADA 213 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G--------~-----~v~~v~~~~~~~-----------~d~~~l~~~ 213 (334)
.+++.-. ....+|+...-+|......+.. .| . .+..++....+. -+++.+++.
T Consensus 109 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (420)
T TIGR00700 109 NAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAI 188 (420)
T ss_pred HHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHH
Confidence 9988432 2335687777777654332222 11 0 112222111000 024566665
Q ss_pred cc----cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh
Q 019868 214 VE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR 284 (334)
Q Consensus 214 l~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~ 284 (334)
+. .+++.+|++.-...-+|..++ .+++.++++. ++++|+||+|.+|...+..... ...+....+.+|||.
T Consensus 189 ~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~-~~~~~~pDi~~lsK~ 267 (420)
T TIGR00700 189 FVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFAC-EHEGPEPDLITTAKS 267 (420)
T ss_pred HHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHH-hhcCCCCCEEEeecc
Confidence 42 245677777655666888776 3344445554 9999999999998654432211 112222224469999
Q ss_pred hcccccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868 285 AGLAGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 285 ~gl~G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~ 327 (334)
++ +|+|+||+++++++++.+... ...++.++++|+++.++|+
T Consensus 268 l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 311 (420)
T TIGR00700 268 LA-DGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLA 311 (420)
T ss_pred cc-CCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHH
Confidence 99 999999999999998887532 2347889999999977663
No 259
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.46 E-value=5.8e-12 Score=122.72 Aligned_cols=190 Identities=18% Similarity=0.155 Sum_probs=135.2
Q ss_pred CCHHHHHHHhcC-c-CC-CCC--C--CcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868 109 PPPEVREALGQL-K-FP-YIY--P--DPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (334)
Q Consensus 109 ~~~~v~~al~~~-~-~~-~~Y--p--~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~ 179 (334)
.++++.+++.+. . +. ..| . ..+ ...+++.+++++|.+. .+++++++.++..++. .+.+||+|++++..
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~gae~--alvv~sg~aAi~l~l~-~l~~GdeVIvs~~e 169 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTGAED--ALVVNNNAAAVLLALN-TLAKGKEVIVSRGE 169 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-HhCCcCEEEECCCh
Confidence 467888887652 1 11 112 1 112 4789999999999753 4556677778888885 46899999999876
Q ss_pred Chh------HHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcc--c--cCCcHHHHHHHHhC-CC
Q 019868 180 FTM------YEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PI 248 (334)
Q Consensus 180 y~~------~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~l~~~-~~ 248 (334)
|.. +...++..|++++.++.++ ..|+++++++++ +++++|++.+++|++ | ...+.+++.++++. ++
T Consensus 170 ~v~~ggs~~i~~~~~~~G~~~~~v~~~~--~~~l~dle~aI~-~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~ 246 (454)
T TIGR00474 170 LVEIGGSFRIPDVMEQSGAKLVEVGTTN--RTHLKDYEDAIT-ENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGL 246 (454)
T ss_pred hhhhcchhhHHHHHHHcCCEEEEeCCCC--CCCHHHHHHhcC-cCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCC
Confidence 432 2345567899999997532 358999999997 789999999999995 6 57899999999988 99
Q ss_pred eEEEccCCcCccC-------CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 249 LVVLDEAYTEFSG-------LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 249 ~lIvDeay~~~~~-------~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
++++|...+.+.. ..+........+-++++.|.+|.+| |-..|+++++++.++.+.
T Consensus 247 ~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~Lg--Gp~~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 247 PVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLG--GPQAGIIVGKKELIERLK 309 (454)
T ss_pred eEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccC--CCeEEEEEECHHHHHhhh
Confidence 9999986433211 0111111223455699999999875 445799999998887654
No 260
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.46 E-value=7.2e-13 Score=138.47 Aligned_cols=169 Identities=16% Similarity=0.098 Sum_probs=140.1
Q ss_pred HHHHHHHHHhcCCCCCCEEEeCCHH----HHHHHHHHHhcCC-CC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCC
Q 019868 132 RRLRAALAKDSGLESDHILVGCGAD----ELIDLIMRCVLDP-GD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 132 ~~lr~~lA~~~~~~~~~I~~t~G~~----~~i~~~~~~l~~~-gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~ 202 (334)
.++|+.+++++|. ++|.++++++ +++.++++.+.++ || +|+++...|......+...|++++.++.+++
T Consensus 571 ~~~r~~la~i~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~~ 648 (993)
T PLN02414 571 EDLGDLLCEITGF--DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDAK 648 (993)
T ss_pred HHHHHHHHHHhCC--CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccCCC
Confidence 4899999999997 7999999999 8999999999866 88 8999999999888888889999999998777
Q ss_pred CCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 203 ~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
+.+|+++|++++++ +++++|++++|+|-+|...+.+++.++++. |+++++|.++..-.. ......+.+-++++.
T Consensus 649 G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~---~l~~p~~~GaD~~~~ 725 (993)
T PLN02414 649 GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQV---GLTSPGFIGADVCHL 725 (993)
T ss_pred CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhcc---CcCCccccCCCEEEe
Confidence 89999999999974 368999999999999999999999999987 999999999843111 111122445679999
Q ss_pred CCchhhc----ccccchheeEcCHHHHHHH
Q 019868 280 TFSKRAG----LAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 280 S~SK~~g----l~G~R~G~l~~~~~~i~~l 305 (334)
|..|.|+ ..|-.+|++.+.+++...+
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~l 755 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFL 755 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEchhhcccC
Confidence 9999765 3456689998887766543
No 261
>PRK02769 histidine decarboxylase; Provisional
Probab=99.46 E-value=1.7e-12 Score=124.08 Aligned_cols=171 Identities=13% Similarity=0.055 Sum_probs=134.3
Q ss_pred HHHHHHHHHhcCCCCCCE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCH
Q 019868 132 RRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNV 207 (334)
Q Consensus 132 ~~lr~~lA~~~~~~~~~I--~~t~G~~~~i~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~ 207 (334)
.+.++.+|+++|++++++ ++|+|+|++....+... ..++++|++++-.|......++..|.+.+.++..+++.+|+
T Consensus 68 ~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~ 147 (380)
T PRK02769 68 RDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDY 147 (380)
T ss_pred HHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcH
Confidence 467888899999876665 88999999977665433 25788999999999999999999999888888766788999
Q ss_pred HHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-C---CeEEEccCCcCccCC---C-CchhhhcCCCcEEE
Q 019868 208 ELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P---ILVVLDEAYTEFSGL---E-SRMEWVKKHDNLIV 277 (334)
Q Consensus 208 ~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~---~~lIvDeay~~~~~~---~-~~~~~~~~~~~~i~ 277 (334)
+++++.+++. ++.+|+++.++|+||.+-|.+++.++++. + +++++|.+|+.+.-. . ..... .. +-..+
T Consensus 148 ~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~-~~-~vDsi 225 (380)
T PRK02769 148 DDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF-AD-GIDSI 225 (380)
T ss_pred HHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc-cC-CCCEE
Confidence 9999999742 38899999999999999999999999987 6 699999999875421 1 11111 11 45678
Q ss_pred EcCCchhhcccccchheeEcCHHHHHHH
Q 019868 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 278 i~S~SK~~gl~G~R~G~l~~~~~~i~~l 305 (334)
..|.+|.++ .-..+|.+++.++..+.+
T Consensus 226 s~s~HK~~~-~P~g~G~l~~r~~~~~~~ 252 (380)
T PRK02769 226 AISGHKFIG-SPMPCGIVLAKKKYVERI 252 (380)
T ss_pred EECCcccCC-CCCCcEEEEEehhhhhhc
Confidence 889999655 345689999988776654
No 262
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.46 E-value=3.1e-12 Score=133.45 Aligned_cols=205 Identities=16% Similarity=0.064 Sum_probs=140.9
Q ss_pred eeecCCCCCCCCCCHHHHHHHhcC-c----CC-CCCCC-----cChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHH
Q 019868 97 IVKIDANENPYGPPPEVREALGQL-K----FP-YIYPD-----PESRRLRAALAKDSGLESD--HILVGCGADELIDLIM 163 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~-~----~~-~~Yp~-----~g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~ 163 (334)
++.|+.+.....++..+.+++... . .. ..|.. .-..+.|+.+|+++|++++ .|++|+|+|+++++++
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva 114 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG 114 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence 688887765544444555655432 1 11 11211 1256899999999999765 4899999999999999
Q ss_pred HHh-cCCCCEEEEcCCCChhH---HHHHHHCCCeEEEeeCC--------CCCCCCH--HHHHHhcc---------cCCce
Q 019868 164 RCV-LDPGDKIVDCPPTFTMY---EFDAAVNGAAVVKVPRK--------SDFSLNV--ELIADAVE---------REKPK 220 (334)
Q Consensus 164 ~~l-~~~gd~Vl~~~p~y~~~---~~~~~~~G~~v~~v~~~--------~~~~~d~--~~l~~~l~---------~~~~~ 220 (334)
..+ .++||+|+++.-.|.+. ...++..|+++..++.+ ....+++ +.+++.++ ..+++
T Consensus 115 ~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~ 194 (805)
T PLN02724 115 ETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYN 194 (805)
T ss_pred HHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcc
Confidence 987 58899999987777643 33445579999988753 2223333 55665431 13568
Q ss_pred EEEEeCCCCccccCCcHHHHHHHHhC---------CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccc
Q 019868 221 CIFLTSPNNPDGSIINDEDLLKILEM---------PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLR 291 (334)
Q Consensus 221 ~i~l~~p~NPtG~~~~~~~l~~l~~~---------~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R 291 (334)
+|.+++.+|.||..+|.+++.++.+. ++++++|.++.-.. ..-.+...+-.+++.|+.|.||.| -.
T Consensus 195 LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~----~piDv~~~~~Dfl~~S~HK~~GgP-~G 269 (805)
T PLN02724 195 LFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGT----SPPDLSRYPADFVVVSFYKIFGYP-TG 269 (805)
T ss_pred eEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCC----CCCChhhcCCCEEEEecceeccCC-CC
Confidence 99999999999999999988666653 24799999876322 111223345569999999987622 23
Q ss_pred hheeEcCHHHHHHHH
Q 019868 292 VGYGAFPLSIIEYLW 306 (334)
Q Consensus 292 ~G~l~~~~~~i~~l~ 306 (334)
+|++++.+++.+.+.
T Consensus 270 ~G~L~vr~~~~~~l~ 284 (805)
T PLN02724 270 LGALLVRRDAAKLLK 284 (805)
T ss_pred ceEEEEehhhhhhhc
Confidence 899999888776654
No 263
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.44 E-value=4.4e-12 Score=123.18 Aligned_cols=233 Identities=15% Similarity=0.141 Sum_probs=147.2
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC--C---CCCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY--I---YPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~--~---Yp~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~ 160 (334)
..+++.++|+..+. ..++ ..|++.+++.+ +.... . ++.+...+|-+.|++..+. ..+.+++++++++++.
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e 115 (421)
T PRK09792 36 DVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVE 115 (421)
T ss_pred eCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHH
Confidence 45677889986653 3343 46788887765 32211 1 1223345677777776542 2368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCC-CCC----CHHHHHHhcc----
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD-FSL----NVELIADAVE---- 215 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~-~~~----d~~~l~~~l~---- 215 (334)
.+++... ....+|+...-+|......+.. .|. .+..+|...+ ..+ +++.+++.++
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK09792 116 NAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE 195 (421)
T ss_pred HHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccC
Confidence 9988432 2235788888777654322211 111 1222332111 112 2467777765
Q ss_pred cCCceEEEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868 216 REKPKCIFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~ 288 (334)
.+++.+|++.-.++++|... +.+.+++|.+ . ++++|+||+|.+|...+.... ..+. ... +.+|+|.++ +
T Consensus 196 ~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pD--i~t~gK~l~-~ 271 (421)
T PRK09792 196 AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPD--LMTMAKSLA-G 271 (421)
T ss_pred CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCc--EEEeehhhc-C
Confidence 24577888886689999866 8666666554 3 999999999999865443222 1211 112 568999998 8
Q ss_pred ccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868 289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~ 327 (334)
|+|+||+++++++.+.+... ...++.++++++++.++++
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 312 (421)
T PRK09792 272 GMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLN 312 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99999999999998876532 2347789999996666553
No 264
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=1.6e-11 Score=115.83 Aligned_cols=199 Identities=17% Similarity=0.165 Sum_probs=157.6
Q ss_pred CCCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868 105 NPYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLES-DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (334)
Q Consensus 105 ~~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~ 181 (334)
-|.+.++++++++..-..+++-|+. -..++++.+...++.+. +-++++.+++.+++..+..+++|||+|++......
T Consensus 12 GP~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~F 91 (383)
T COG0075 12 GPVPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKF 91 (383)
T ss_pred CCCCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChH
Confidence 3566789999998874333444554 25678888888888764 55666788899999999999999999998887664
Q ss_pred --hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc-cCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868 182 --MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE-REKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (334)
Q Consensus 182 --~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~ 257 (334)
-+...++.+|++++.+..+.+-.+|+++++++++ .++.++|.+++.--+||...|.+++.++++. +.++|+|.+-+
T Consensus 92 G~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS 171 (383)
T COG0075 92 GERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS 171 (383)
T ss_pred HHHHHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc
Confidence 4677889999999999977777899999999998 3467899999999999999999999999998 99999999865
Q ss_pred CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868 258 EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
-... .-.+++++-++++.+--|.++.| -.+|++.++++.++++...
T Consensus 172 ~Gg~----~~~vd~wgiDv~itgSQK~l~~P-PGla~v~~S~~a~e~~~~~ 217 (383)
T COG0075 172 LGGE----PLKVDEWGIDVAITGSQKALGAP-PGLAFVAVSERALEAIEER 217 (383)
T ss_pred CCCc----ccchhhcCccEEEecCchhccCC-CccceeEECHHHHHHHhcC
Confidence 3221 11234556679999999999653 2378898888888776644
No 265
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.42 E-value=7.6e-13 Score=121.88 Aligned_cols=195 Identities=22% Similarity=0.259 Sum_probs=138.1
Q ss_pred CCHHHHHHHhcCcCC-CCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhH---
Q 019868 109 PPPEVREALGQLKFP-YIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMY--- 183 (334)
Q Consensus 109 ~~~~v~~al~~~~~~-~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~--- 183 (334)
+.|++.+++.+...+ ..|. ++...+|++.+++++|.+ ..+++++++.+...+++++++|++.|++..+.|...
T Consensus 7 ~~~~m~~a~~~a~~gd~~Yg~D~~~~~l~~~i~~l~g~e--~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~ 84 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDDAYGEDPTTARLEERIAELFGKE--AALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET 84 (290)
T ss_dssp S-HHEEHHHHHTTSB-CCTTSSHHHHHHHHHHHHHHTSS--EEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST
T ss_pred CCHHHHHHHHccccCCcccCCChhHHHHHHHHHHHcCCC--EEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc
Confidence 568888888664322 3584 556899999999999954 557888999999999999999999999999987532
Q ss_pred HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEEEEeCCCCcc-ccCCcHHHHHHHHhC----CCeEEEc
Q 019868 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCIFLTSPNNPD-GSIINDEDLLKILEM----PILVVLD 253 (334)
Q Consensus 184 ~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i~l~~p~NPt-G~~~~~~~l~~l~~~----~~~lIvD 253 (334)
.......|++++.++.+++..+|++++++.+.. .++++|+|++|+|-. |.+++.+++++|.+. ++.++.|
T Consensus 85 ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD 164 (290)
T PF01212_consen 85 GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD 164 (290)
T ss_dssp THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE
T ss_pred chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe
Confidence 223355899999999765478999999999875 467999999999964 889999999999876 9999999
Q ss_pred cCCcCccC--CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh
Q 019868 254 EAYTEFSG--LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 254 eay~~~~~--~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
-+=-.-.- .+.....+. ..-+.+..|++|..++++ -+.++.++++++...+.
T Consensus 165 GARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~ 218 (290)
T PF01212_consen 165 GARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ 218 (290)
T ss_dssp ETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH
T ss_pred hhhHHHhhhcccccHHHHh-hhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH
Confidence 98422110 001111111 123366679999987765 25566788877654444
No 266
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=5.1e-12 Score=122.76 Aligned_cols=233 Identities=14% Similarity=0.137 Sum_probs=148.3
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~ 160 (334)
..+++.++|+..+. ..++ ..|++.+++++ +.... .++.+...+|-+.+++..+. ..+.++++++++++..
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e 115 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVE 115 (421)
T ss_pred eCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHH
Confidence 34677889987663 3343 45778888765 32211 12333445677777776653 2468999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCCe-------------EEEeeCCC-CCC----CCHHHHHHhcc----
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRKS-DFS----LNVELIADAVE---- 215 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~~-------------v~~v~~~~-~~~----~d~~~l~~~l~---- 215 (334)
.+++.-. ....+|+...-+|......+.. .|.. +..++..+ ... -+++.+++.++
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 195 (421)
T PRK06777 116 NAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIA 195 (421)
T ss_pred HHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccC
Confidence 9988432 2235688777777655433322 1210 11122111 111 13566777664
Q ss_pred cCCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhccc
Q 019868 216 REKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~ 288 (334)
.+++.+|++.-..+..|. +++.+.+++|.+. ++++|+||+|.+|...+.... ..+.... ++ ++||.++ +
T Consensus 196 ~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pD-iv--~~sK~l~-~ 271 (421)
T PRK06777 196 PDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPD-LI--TMAKSLG-G 271 (421)
T ss_pred CCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCC-EE--eeehhhc-C
Confidence 235677777766777886 5787777666554 999999999998865443221 1111122 32 6999999 9
Q ss_pred ccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 289 GLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
|+|+||+++++++++.+..... .++.++++++++.++|+
T Consensus 272 G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 272 GMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLD 312 (421)
T ss_pred CCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 9999999999999887764333 37789999999999986
No 267
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.41 E-value=5.3e-12 Score=115.96 Aligned_cols=164 Identities=20% Similarity=0.237 Sum_probs=131.3
Q ss_pred CCCCC---CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh----HHHHHHHCCCeE
Q 019868 122 FPYIY---PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM----YEFDAAVNGAAV 194 (334)
Q Consensus 122 ~~~~Y---p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~G~~v 194 (334)
.++.| .+|....|.+.||.+-|-- --+.+.+++.++..++..++++||.|+...--|+. +....+..|.++
T Consensus 52 ~G~iYsRi~NPT~~vlE~RiAaLEGG~--aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v 129 (426)
T COG2873 52 PGNIYTRIMNPTTDVLEERIAALEGGV--AALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEV 129 (426)
T ss_pred CCceeeeccCchHHHHHHHHHHhhcch--hhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEE
Confidence 35556 4667889999999887521 23455677788999999999999999998888864 344556799999
Q ss_pred EEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCC
Q 019868 195 VKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHD 273 (334)
Q Consensus 195 ~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~ 273 (334)
..++. .|++.++++++ +++|+|++..-.||-+.+.+.+.+.++++. ++.+|+|..+.. + .+-..-+++
T Consensus 130 ~fvd~-----~d~~~~~~aI~-~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at----p-yl~rP~~hG 198 (426)
T COG2873 130 RFVDP-----DDPENFEAAID-ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT----P-YLCRPIEHG 198 (426)
T ss_pred EEeCC-----CCHHHHHHHhC-cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc----c-eecchhhcC
Confidence 99864 26899999998 799999999999999999999999999998 999999998863 1 111122456
Q ss_pred cEEEEcCCchhhcccccchheeEcC
Q 019868 274 NLIVLRTFSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 274 ~~i~i~S~SK~~gl~G~R~G~l~~~ 298 (334)
..|+++|.+|..|-.|--+|-++++
T Consensus 199 ADIVvHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 199 ADIVVHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred CCEEEEeecccccCCccccceEEEe
Confidence 6799999999888788888888764
No 268
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=8e-12 Score=121.43 Aligned_cols=234 Identities=16% Similarity=0.145 Sum_probs=147.9
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~ 160 (334)
..++..++|+..|. ..++ .+|++.+++++ +... ..|+.+...+|-+.+++..+-. .+.++++++++++..
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e 115 (425)
T PRK07495 36 DKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVE 115 (425)
T ss_pred eCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 44677899987663 2344 46788888775 3221 1234444566777777776532 268999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCC-CCCCC----HHHHHHhcc----
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DFSLN----VELIADAVE---- 215 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~~~d----~~~l~~~l~---- 215 (334)
.+++.-. ....+|+...-.|......+.. .|. .++.+|.+. ..+.+ ++.+++.++
T Consensus 116 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~ 195 (425)
T PRK07495 116 NAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVD 195 (425)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhccC
Confidence 9988432 2336788777777654322211 110 223333211 11222 445566653
Q ss_pred cCCceEEEEe-CCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccc
Q 019868 216 REKPKCIFLT-SPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAG 289 (334)
Q Consensus 216 ~~~~~~i~l~-~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G 289 (334)
.+++.+|++. ..+| +|. ..+.+.+++|.+. ++++|+||+|.+|...+... .....+....+.+|||.++ .|
T Consensus 196 ~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~~~~gv~pDi~tlsK~l~-~G 272 (425)
T PRK07495 196 PQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEVAADLTTMAKGLA-GG 272 (425)
T ss_pred CCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-eecccCCCCCEEeehhhhc-CC
Confidence 2457777776 3355 784 4677777776654 99999999999876544321 1222344456788999998 89
Q ss_pred cchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868 290 LRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 290 ~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
+|+|++++++++.+.+.... ..|+.++++++++.++|+
T Consensus 273 ~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 312 (425)
T PRK07495 273 FPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLD 312 (425)
T ss_pred ccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 99999999999988775422 347789999996666553
No 269
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.41 E-value=2.5e-12 Score=122.87 Aligned_cols=167 Identities=18% Similarity=0.225 Sum_probs=121.3
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~-- 203 (334)
|..-..+.++.+|+.||.+ +..++++|++.++..++.+++++||+|+++..+|.+....+...|+++++++.. +.+
T Consensus 64 p~G~I~eAe~~aA~~fGAd-~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGAD-KTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp TBTHHHHHHHHHHHHHTES-EEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TTS-
T ss_pred CccHHHHHHHHHHHhcCCC-eEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccccCC
Confidence 4334788999999999965 468889999999999999999999999999999999888888899999998742 222
Q ss_pred --CCCH-----HHHHHhccc-CCce---EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCc---hh
Q 019868 204 --SLNV-----ELIADAVER-EKPK---CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESR---ME 267 (334)
Q Consensus 204 --~~d~-----~~l~~~l~~-~~~~---~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~---~~ 267 (334)
.+++ +.+++++++ +..| +++|++|+. .|.+++.+++.++++. +..|++||||... .+.+-+ ..
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~ 221 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA 221 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence 3455 889888864 2334 499999986 8999999999999998 9999999999653 332111 11
Q ss_pred hh---cCCCcEEEEcCCchhhcccccchh-eeEc
Q 019868 268 WV---KKHDNLIVLRTFSKRAGLAGLRVG-YGAF 297 (334)
Q Consensus 268 ~~---~~~~~~i~i~S~SK~~gl~G~R~G-~l~~ 297 (334)
.. .....++++.|..|++ +++.=+ ++..
T Consensus 222 ~gad~~~~~~~~vvqS~HKtL--~altQts~lh~ 253 (417)
T PF01276_consen 222 LGADRPNDPGIIVVQSTHKTL--PALTQTSMLHV 253 (417)
T ss_dssp TTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEE
T ss_pred ccCccccccceeeeechhhcc--cccccceEEEe
Confidence 11 1234579999999985 576654 4444
No 270
>PLN03032 serine decarboxylase; Provisional
Probab=99.41 E-value=6.3e-12 Score=119.68 Aligned_cols=173 Identities=14% Similarity=0.069 Sum_probs=135.0
Q ss_pred hHHHHHHHHHhcCCCCCCE--EEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCC
Q 019868 131 SRRLRAALAKDSGLESDHI--LVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLN 206 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I--~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d 206 (334)
..+.++.+++++|.+++++ ++|+|+|+++...+.... .+++.|+++.-.|.+....++..|..+..+|.+.++.+|
T Consensus 68 e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id 147 (374)
T PLN03032 68 EVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEID 147 (374)
T ss_pred HHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCc
Confidence 3578888999999988877 999999999988877543 345689999999999999999999998899987888999
Q ss_pred HHHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-C-----CeEEEccCCcCccC--CC--CchhhhcCCCc
Q 019868 207 VELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-P-----ILVVLDEAYTEFSG--LE--SRMEWVKKHDN 274 (334)
Q Consensus 207 ~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~-----~~lIvDeay~~~~~--~~--~~~~~~~~~~~ 274 (334)
+++|++++++. ++.+|+++..+|+||.+-|.+++.++++. + +++.+|.+|..+.- .. +.... . ..-
T Consensus 148 ~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~-~-~~v 225 (374)
T PLN03032 148 YDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF-R-KPI 225 (374)
T ss_pred HHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC-C-cCC
Confidence 99999999742 46788888899999999999999999986 4 58999999976431 11 11111 1 124
Q ss_pred EEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 275 ~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
..+.-|.+|.+| .-..+|.++..++.++.+.
T Consensus 226 DSis~s~HK~~g-~P~g~G~ll~r~~~~~~~~ 256 (374)
T PLN03032 226 GSVSVSGHKFLG-CPMPCGVALTRKKHVKALS 256 (374)
T ss_pred cEEEECcccccC-CCcCeEEEEEEchhhHhhc
Confidence 467789999655 3455899998877666553
No 271
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.41 E-value=2.8e-11 Score=116.26 Aligned_cols=203 Identities=13% Similarity=0.129 Sum_probs=140.4
Q ss_pred eeecCCCCCCCCCCHHHHHH-HhcCcCC-CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEE
Q 019868 97 IVKIDANENPYGPPPEVREA-LGQLKFP-YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKI 173 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~a-l~~~~~~-~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~V 173 (334)
+|||-+- -++ ..+.++ +..+..+ ..| .++...+|++++++++|.+ +++.+++++.++.+++...++|||+|
T Consensus 40 ~iDLltD---sgT-~aMs~~q~a~~~~GDe~yag~~s~~~lE~~va~~~G~~--~av~v~sGT~Al~ll~~l~l~pGDeV 113 (450)
T TIGR02618 40 YIDLLTD---SGT-NAMSDKQWAGLMMGDEAYAGSRNFYHLERTVRELYGFK--YVVPTHQGRGAENLLSQIAIKPGDYV 113 (450)
T ss_pred EEEcccC---CCc-HHHHHHHHHHhhhcchhhcCCCcHHHHHHHHHHHHCCC--eEEEcCCHHHHHHHHHHhCCCCcCEE
Confidence 4787442 222 666666 6654322 458 5677899999999999965 79999999999998887778999987
Q ss_pred EEcCCCCh-hHHHHHHHCCCeEEEeeC----------CCCCCCCHHHHHHhcccC---CceEEEEeCCCCcc-ccCCcHH
Q 019868 174 VDCPPTFT-MYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDE 238 (334)
Q Consensus 174 l~~~p~y~-~~~~~~~~~G~~v~~v~~----------~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~NPt-G~~~~~~ 238 (334)
+.++|. .+...+...|+.++.++. +.++.+|++++++++++. ++++|.+.+++|-. |++++.+
T Consensus 114 --psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~ 191 (450)
T TIGR02618 114 --PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMA 191 (450)
T ss_pred --CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHH
Confidence 667774 444446788987777743 235789999999999742 34578888888855 8998876
Q ss_pred HHHHHH---hC-CCeEEEccCCcC----cc------CCCCchhh-hcC--CCcEEEEcCCchhhccc-ccchheeE-cCH
Q 019868 239 DLLKIL---EM-PILVVLDEAYTE----FS------GLESRMEW-VKK--HDNLIVLRTFSKRAGLA-GLRVGYGA-FPL 299 (334)
Q Consensus 239 ~l~~l~---~~-~~~lIvDeay~~----~~------~~~~~~~~-~~~--~~~~i~i~S~SK~~gl~-G~R~G~l~-~~~ 299 (334)
+++++. +. |+.||.|.+... |. +.+..... +.+ ..-..++.|..|.++.+ | |+++ .++
T Consensus 192 ~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~G---G~l~~~d~ 268 (450)
T TIGR02618 192 NMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIG---GFLCMNDD 268 (450)
T ss_pred HHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCc---eEEEeCCH
Confidence 665554 44 999999998754 21 11111111 000 11235888999987655 4 6666 378
Q ss_pred HHHHHHHHhcC
Q 019868 300 SIIEYLWRAKQ 310 (334)
Q Consensus 300 ~~i~~l~~~~~ 310 (334)
++++++++...
T Consensus 269 ~l~~k~r~~~~ 279 (450)
T TIGR02618 269 EMFQSAKELVV 279 (450)
T ss_pred HHHHHHHHHhh
Confidence 89998887743
No 272
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.41 E-value=6.8e-12 Score=115.36 Aligned_cols=224 Identities=17% Similarity=0.174 Sum_probs=159.5
Q ss_pred CCCCCCCCHHHHHHHhcCc--CCCCCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868 103 NENPYGPPPEVREALGQLK--FPYIYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (334)
Q Consensus 103 ~~~~~~~~~~v~~al~~~~--~~~~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~ 179 (334)
.+|--++.|++++++.+.. ....|.+. -..++.+.+++.++. +.+++++++|++....+.+.++||+.|++..-.
T Consensus 6 SDn~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~a 83 (342)
T COG2008 6 SDNVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK--EAALFVPSGTQANQLALAAHCQPGESVICHETA 83 (342)
T ss_pred cCccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC--ceEEEecCccHHHHHHHHHhcCCCCeEEEeccc
Confidence 3566678899999998754 34678654 578999999999996 789999999999999999999999999999888
Q ss_pred ChhHHHH--HH-HCCCeEEEeeCCCCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC----C
Q 019868 180 FTMYEFD--AA-VNGAAVVKVPRKSDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM----P 247 (334)
Q Consensus 180 y~~~~~~--~~-~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~ 247 (334)
|....+. .. ..++..+.+....+..+++++++..+... .+.++++.+.+|--|.+++.+++++|.+. +
T Consensus 84 Hi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~ 163 (342)
T COG2008 84 HIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHG 163 (342)
T ss_pred cceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhC
Confidence 8533221 11 23444454444567899999999987632 24455555555588999999999999875 8
Q ss_pred CeEEEccCCcC--ccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeE-cCHHHHHHHHHhcCC----CCCcHHHHH
Q 019868 248 ILVVLDEAYTE--FSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQP----YNVSVAAEV 320 (334)
Q Consensus 248 ~~lIvDeay~~--~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~~~~~~----~~~~~~~q~ 320 (334)
+.|.+|.+=.. ....+.....+..+ -+.+..++||..+.++ |.++ +++++++.+...+.. +.-..+..+
T Consensus 164 l~LHmDGAR~~nA~valg~~~~~~~~~-~D~v~~~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA 239 (342)
T COG2008 164 LPLHMDGARLANALVALGVALKTIKSY-VDSVSFCLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGLMRKARFLAA 239 (342)
T ss_pred CceeechHHHHHHHHHcCCCHHHHHhh-CCEEEEecccCCccee---eeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHH
Confidence 99999987322 11112222222222 2355667999876665 7765 488888877654433 556778888
Q ss_pred HHHHHhcCchhh
Q 019868 321 AACAALQNPIYL 332 (334)
Q Consensus 321 aa~~~L~~~~~~ 332 (334)
....+|+|.-|+
T Consensus 240 ~~~~~l~~~~~~ 251 (342)
T COG2008 240 QGLYALEDDVWR 251 (342)
T ss_pred HHHHHHhccHHH
Confidence 888899987664
No 273
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.39 E-value=1.3e-11 Score=121.00 Aligned_cols=234 Identities=19% Similarity=0.157 Sum_probs=139.4
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCC-CCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES-DHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~-~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+. ..++ ..|.+.+++.+ +.... .+..+...+|-+.|++..+... +.++++++++++..
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e 129 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVE 129 (451)
T ss_pred eCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHH
Confidence 44677889987663 3344 46888888765 32211 1223334567777777765322 58999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCC----CCCC--------HHHHHH
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSD----FSLN--------VELIAD 212 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~----~~~d--------~~~l~~ 212 (334)
.+++.-. ....+|+....+|......+.. .|- .+..+|.... .+.. ++.+++
T Consensus 130 ~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (451)
T PRK06918 130 NAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKN 209 (451)
T ss_pred HHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHH
Confidence 9988432 2335688777777654433322 121 1222221110 0111 123333
Q ss_pred hc----ccCCceEEEEeCCCCcc-ccCC-cHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 213 AV----EREKPKCIFLTSPNNPD-GSII-NDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 213 ~l----~~~~~~~i~l~~p~NPt-G~~~-~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
.+ ..+++.+|+ ..|.... |.++ +.+.+++|.+. ++++|+||+|.+|...+..... ...+...-+.|||
T Consensus 210 ~~~~~~~~~~iAavi-~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~-~~~~v~pDi~t~s 287 (451)
T PRK06918 210 FFISEVAPETIAAVV-MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAI-EHFDVVPDLITVS 287 (451)
T ss_pred HHHhhcCCCceEEEE-ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehh-HhcCCCCCEEeee
Confidence 22 223444555 4565444 6544 44546666553 9999999999998654432211 1111111144899
Q ss_pred hhhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 283 KRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 283 K~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
|.++ +|+|+||+++++++++.+.+... .++.++++|.++.++|+
T Consensus 288 K~l~-~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~ 333 (451)
T PRK06918 288 KSLG-AGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLD 333 (451)
T ss_pred hhhc-CCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHH
Confidence 9999 99999999999999887754333 37889999999777764
No 274
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.38 E-value=6.8e-12 Score=119.27 Aligned_cols=187 Identities=17% Similarity=0.137 Sum_probs=125.9
Q ss_pred CCCCCCHHHHHHHhc-Cc----CCC-CC------CC--cChHHHHHHHHHhcCC-CCCCEEEeCC-HHHHHHHHHHHhcC
Q 019868 105 NPYGPPPEVREALGQ-LK----FPY-IY------PD--PESRRLRAALAKDSGL-ESDHILVGCG-ADELIDLIMRCVLD 168 (334)
Q Consensus 105 ~~~~~~~~v~~al~~-~~----~~~-~Y------p~--~g~~~lr~~lA~~~~~-~~~~I~~t~G-~~~~i~~~~~~l~~ 168 (334)
-|...|+.|++++.+ +. .++ .| +. .-..+.|+.++++++. ++++|++|+| +|++++.++..++.
T Consensus 6 Gp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~ 85 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG 85 (355)
T ss_pred CCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC
Confidence 355678899998865 21 111 11 11 1256899999999997 5678999988 99999999999987
Q ss_pred ---CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCC-C-HHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 169 ---PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-N-VELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 169 ---~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~-d-~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
+||.|+. .+....+...++..|+++..++.++++.+ + ++..+..++ +++++|.+++-.|.||..++ ++
T Consensus 86 ~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~lV~~~h~~t~tG~~~~-----~i 158 (355)
T cd00611 86 DKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLA-PDAAYVHYCSNETIHGVEFD-----EV 158 (355)
T ss_pred CCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCC-CCCCEEEEeCCcccccEEcc-----ee
Confidence 5555543 22222233366778999888885433222 3 233333344 68999999999999999843 44
Q ss_pred HhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 244 LEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 244 ~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
++. ++++++|.+..-....- .+.+.+ +.+.|..|.||.+| +|+++++++.++++.
T Consensus 159 ~~~~g~~~~VDa~qs~g~~~i----dv~~~~--~~~ss~~K~lGP~G--~g~l~~~~~~~~~~~ 214 (355)
T cd00611 159 PDTGGVPLVADMSSNILSRPI----DVSKFG--VIYAGAQKNLGPAG--VTVVIVRKDLLGKAR 214 (355)
T ss_pred cccCCCeEEEEccccccCCCC----CHHHhC--EEEeecccccCCCc--eEEEEECHHHHhhcc
Confidence 455 89999999987433211 111222 45566899988666 799999998887644
No 275
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.37 E-value=1.3e-12 Score=119.29 Aligned_cols=180 Identities=23% Similarity=0.293 Sum_probs=111.1
Q ss_pred hHHHHHHHHHhcC------CCCCCEEEeCCHHHHHHHHHHHhcCC------CCEEEEcCCCChhHHHHHHHCCCeEEEee
Q 019868 131 SRRLRAALAKDSG------LESDHILVGCGADELIDLIMRCVLDP------GDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (334)
Q Consensus 131 ~~~lr~~lA~~~~------~~~~~I~~t~G~~~~i~~~~~~l~~~------gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~ 198 (334)
.++|.+.|.+++. .+-..|++++|+++.++.++.+|... --.|+...|.|+.|........-....+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 5789999988872 24458999999999999999988532 14799999999999988765433323332
Q ss_pred -CCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEE
Q 019868 199 -RKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLI 276 (334)
Q Consensus 199 -~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i 276 (334)
....|. + . +...+-+=++++||||.|.+ .+.+++. +..+|.|-+|..=.+. +.....+..|
T Consensus 125 Gda~~~~-~------~-~~~~~~IElVTSPNNPDG~l-----r~~V~~g~~~k~I~D~AYYWPhyT----pI~~~aD~Di 187 (363)
T PF04864_consen 125 GDASNFK-N------S-DNPSPYIELVTSPNNPDGQL-----REAVLNGSSGKVIHDLAYYWPHYT----PITAPADHDI 187 (363)
T ss_dssp EECCCGT-T--------S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-STTTS-------S-B--SE
T ss_pred ccHHhhc-c------C-CCCCCeEEEEeCCCCCcccc-----cchhcCCCCcceeeeeeeeccccc----ccCCCCCCce
Confidence 112221 1 0 01345566889999999987 3444554 6678999999753332 2222345569
Q ss_pred EEcCCchhhcccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 277 VLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 277 ~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
.+.|+||.-|-+|-|+||+++ ++++.+.|.+.... .+++.-+|.-+..+|+
T Consensus 188 MLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 188 MLFTLSKLTGHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILK 241 (363)
T ss_dssp EEEEHHHHCS-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHH
T ss_pred EEEEEecccCccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHH
Confidence 999999999999999999999 56777888766543 6788888888887775
No 276
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.35 E-value=1.3e-11 Score=110.20 Aligned_cols=225 Identities=21% Similarity=0.236 Sum_probs=157.6
Q ss_pred eeecCCCCCCCCCCHHHHHHHhcCcC-CCCCC-CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEE
Q 019868 97 IVKIDANENPYGPPPEVREALGQLKF-PYIYP-DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIV 174 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~~~~-~~~Yp-~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl 174 (334)
.+||-. +.-.-|..++++++.+... ..-|. ++...+|.+.+|+.+| +..-+++++|++..+-.++..+-++|.+|+
T Consensus 23 ~vDLRS-DTvT~PTdeMr~am~eA~vgDdVyGeD~tt~rLE~~vA~l~G-KEAgLFv~SGTmgNllaIm~Hc~~rg~eii 100 (384)
T KOG1368|consen 23 SVDLRS-DTVTVPTDEMRRAMAEASVGDDVYGEDPTTNRLEQRVAELFG-KEAGLFVPSGTMGNLLAIMVHCHQRGSEII 100 (384)
T ss_pred cccccc-ccccCChHHHHHHHhhcccCcccccCCccHHHHHHHHHHHhC-ccceeeecccccccHHHHHHHhcCCCceEE
Confidence 466654 2233455889999887432 24563 5568999999999999 345688888888777766666667999999
Q ss_pred EcCCCCh-hHHH--HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-------CCceEEEEeCCCCccc-cCCcHHHHHHH
Q 019868 175 DCPPTFT-MYEF--DAAVNGAAVVKVPRKSDFSLNVELIADAVER-------EKPKCIFLTSPNNPDG-SIINDEDLLKI 243 (334)
Q Consensus 175 ~~~p~y~-~~~~--~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-------~~~~~i~l~~p~NPtG-~~~~~~~l~~l 243 (334)
+.+-+|- .|+. .....|+.+.++..+++..+|++++++++.. +.+++|.|.|-+|-+| .++|.|++.++
T Consensus 101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v 180 (384)
T KOG1368|consen 101 VGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRV 180 (384)
T ss_pred eccchheeehhccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHH
Confidence 9998875 3332 4455789999998888889999999999873 2478999998877777 99999999887
Q ss_pred HhC----CCeEEEccCCcCcc---CCCCchhhhcCCCcEEEEcCCchhhcccccchheeE-cCHHHHHHHHHhcCC----
Q 019868 244 LEM----PILVVLDEAYTEFS---GLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGA-FPLSIIEYLWRAKQP---- 311 (334)
Q Consensus 244 ~~~----~~~lIvDeay~~~~---~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~-~~~~~i~~l~~~~~~---- 311 (334)
.++ ++.+.+|.+-..-+ .+-+.-......+.+-++ |||.+|.| +|-++ ++.++|+..+..+..
T Consensus 181 ~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiC--LSKglgAP---VGSViVG~k~FI~kA~~~RKalGGG 255 (384)
T KOG1368|consen 181 KALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSIC--LSKGLGAP---VGSVIVGSKDFIDKARHFRKALGGG 255 (384)
T ss_pred HHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhh--hhccCCCC---cccEEEccHHHHHHHHHHHHHhcCc
Confidence 664 89999998754322 111221222222333333 79987654 67664 588999866544433
Q ss_pred CCCcHHHHHHHHHHhcC
Q 019868 312 YNVSVAAEVAACAALQN 328 (334)
Q Consensus 312 ~~~~~~~q~aa~~~L~~ 328 (334)
+..+....+|+..+|++
T Consensus 256 mRQsGvLaaaaLval~~ 272 (384)
T KOG1368|consen 256 MRQSGVLAAAALVALDE 272 (384)
T ss_pred hhHHHHHHHHHHHHhhc
Confidence 45677777777777765
No 277
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.31 E-value=7.3e-11 Score=114.79 Aligned_cols=236 Identities=14% Similarity=0.194 Sum_probs=145.8
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..| ...++ ..|++.+++++ +... . .|+.+...+|.+.|++..+-..+.++++++++++...
T Consensus 38 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 117 (423)
T PRK05964 38 LADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEV 117 (423)
T ss_pred eCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 3467788999766 34444 45888888765 3221 1 2444445677777877764334689999999999999
Q ss_pred HHHHhc------C-CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCC--CCCCHHHHHHhccc--
Q 019868 162 IMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD--FSLNVELIADAVER-- 216 (334)
Q Consensus 162 ~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~--~~~d~~~l~~~l~~-- 216 (334)
+++... . +| .+|+...-.|......+.. .+- .+..++...+ ...+++.+++.+.+
T Consensus 118 A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~ 197 (423)
T PRK05964 118 ALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA 197 (423)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC
Confidence 988432 1 23 5788888888654332222 111 1122222111 01127778877742
Q ss_pred CCceEEEEeC-CCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccccc
Q 019868 217 EKPKCIFLTS-PNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGL 290 (334)
Q Consensus 217 ~~~~~i~l~~-p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~ 290 (334)
+++.+|++.. .++..|... +.+.+++|.+ . ++++|+||++.+|...+..... ...+...-+-+++|.++..++
T Consensus 198 ~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~-~~~~v~pDi~~~~K~l~gG~~ 276 (423)
T PRK05964 198 GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFAC-EQAGVSPDIMCLSKGLTGGYL 276 (423)
T ss_pred CcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHH-HhcCCCCCeeeeehhhhcCcc
Confidence 3455676654 467778766 6666666654 3 9999999999887543322111 111111223468999974448
Q ss_pred chheeEcCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhc
Q 019868 291 RVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 291 R~G~l~~~~~~i~~l~~~--------~~~~~~~~~~q~aa~~~L~ 327 (334)
++|++++++++.+.+... ...|+.++++.+++.++|+
T Consensus 277 p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~ 321 (423)
T PRK05964 277 PLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLD 321 (423)
T ss_pred cceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 999999999999887532 1225678888888888776
No 278
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=2.1e-10 Score=112.21 Aligned_cols=232 Identities=14% Similarity=0.144 Sum_probs=139.8
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCCCC-----CCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY-----PDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Y-----p~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+. ..++ ..|++.+++.+ +.....+ +.....+|.+.+++.++.. .+.++++++++++..
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e 131 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVE 131 (443)
T ss_pred eCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHH
Confidence 45678899987663 3444 46888888765 3221111 2223446666676666422 257888888899999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHHC-CC-------------eEEEeeCCCCCC------C--------CHHHH
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-GA-------------AVVKVPRKSDFS------L--------NVELI 210 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-G~-------------~v~~v~~~~~~~------~--------d~~~l 210 (334)
.+++.-. ...++|+....+|..+...+... +. .+..++....+. . .++.+
T Consensus 132 ~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 211 (443)
T PRK06058 132 NAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVI 211 (443)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHH
Confidence 9988321 23378999999897665443321 10 112222111111 0 12333
Q ss_pred HHhcccCCceEEEEeCCCCccc-cCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCc
Q 019868 211 ADAVEREKPKCIFLTSPNNPDG-SII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFS 282 (334)
Q Consensus 211 ~~~l~~~~~~~i~l~~p~NPtG-~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~S 282 (334)
++.+..+++.+|++ .|.+..| ... +.+.+ +++++. |+++|.||++.+|...+.... ..+-.+. ++ +++
T Consensus 212 ~~~~~~~~iAavi~-EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PD-iv--~~g 287 (443)
T PRK06058 212 EKQVGADNLAAVII-EPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPD-LI--TTA 287 (443)
T ss_pred HHhhCCCceEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCC-EE--EEc
Confidence 34443345666664 5655554 443 34444 445555 999999999998864332221 1111122 33 458
Q ss_pred hhhcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868 283 KRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 283 K~~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
|.+| .|+++|++++++++.+.+.... ..|+.|+++++++.++|+
T Consensus 288 K~l~-~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (443)
T PRK06058 288 KGIA-GGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIE 333 (443)
T ss_pred cccc-CCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9998 8999999999999988775432 347889999999999885
No 279
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.30 E-value=3.1e-10 Score=100.29 Aligned_cols=194 Identities=22% Similarity=0.217 Sum_probs=152.6
Q ss_pred CCHHHHHHHhcCcCCC--------C----CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEc
Q 019868 109 PPPEVREALGQLKFPY--------I----YPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDC 176 (334)
Q Consensus 109 ~~~~v~~al~~~~~~~--------~----Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~ 176 (334)
.+++.++++-+...++ + -.-+...++.+.+|+++|++ .+-+|+|+.++-..++.+++++||.|++.
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D--~~R~t~GARe~KfavMhal~~~gd~vV~D 106 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD--EVRVTAGAREAKFAVMHALCKEGDWVVVD 106 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc--eeeecccchhhHHHHHHHhccCCCEEEEc
Confidence 4677777775531111 1 11234678889999999965 78899999999999999999999999999
Q ss_pred CCCChhHHHHHHHCCCeEEEeeCC--CCCCCCHHHHHHhccc------CCceEEEEeCCCCccccCCcHHHHHHHHhC-C
Q 019868 177 PPTFTMYEFDAAVNGAAVVKVPRK--SDFSLNVELIADAVER------EKPKCIFLTSPNNPDGSIINDEDLLKILEM-P 247 (334)
Q Consensus 177 ~p~y~~~~~~~~~~G~~v~~v~~~--~~~~~d~~~l~~~l~~------~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~ 247 (334)
...|.....++..+|+++..||.. .++.++++...+.+++ ..+.+.+|++|..-.|.+.+.+.+.++++. +
T Consensus 107 ~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~g 186 (382)
T COG1103 107 SLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYG 186 (382)
T ss_pred CcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcC
Confidence 988877777888999999999942 4678888887776642 347788899999999999999999999998 9
Q ss_pred CeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhc
Q 019868 248 ILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 248 ~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
+.++...+|....- ..........++++|-.|.++ +.-.+|.+....++.+.+.+..
T Consensus 187 vPlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmA-As~PiGvl~~~eE~ae~V~r~S 243 (382)
T COG1103 187 VPLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMA-ASAPIGVLAMSEEWAEIVLRRS 243 (382)
T ss_pred CceEeecceeeccc----cccccccCCCEEEecCccchh-ccCCeeEEeehhHHHHHHHhhc
Confidence 99999999974321 112223455699999999997 4457999999999998877665
No 280
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.30 E-value=3.3e-10 Score=110.39 Aligned_cols=208 Identities=16% Similarity=0.025 Sum_probs=137.7
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC---cCCCCC------CCcC-h---HH-HHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIY------PDPE-S---RR-LRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Y------p~~g-~---~~-lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
.+.|+|-..||-. ++.+.+++... .+..+| .... . +. ..+...++++.+..+|-.-+|+. +..
T Consensus 49 ~~~l~LiasEN~~--s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~anvqp~Sg~~-An~ 125 (493)
T PRK13580 49 RSSLKLIASENYS--SLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEHAYVQPHSGAD-ANL 125 (493)
T ss_pred hcCceEecccccC--CHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCcccccCCCcHH-HHH
Confidence 3458888788754 57888888652 222233 2221 1 22 33344456788888898888886 455
Q ss_pred HHHHHhcCC-------------------------------CCEEEEcCCCChhHHH---HHHHCC--CeEEEeeCC-CCC
Q 019868 161 LIMRCVLDP-------------------------------GDKIVDCPPTFTMYEF---DAAVNG--AAVVKVPRK-SDF 203 (334)
Q Consensus 161 ~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~---~~~~~G--~~v~~v~~~-~~~ 203 (334)
.++.++++| ||+|+..++..+.+.. .....| .+++.++.+ +++
T Consensus 126 ~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g 205 (493)
T PRK13580 126 VAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTG 205 (493)
T ss_pred HHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccC
Confidence 566667765 7999988776653311 111122 445555543 457
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcC
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRT 280 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S 280 (334)
.+|++++++.++ ++++.|++++.+|- |...+.+++.+|++. +.++++|+++.-......... .-...+..++++|
T Consensus 206 ~iD~d~l~~~~~-~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT 283 (493)
T PRK13580 206 LLDYDEIAALAR-EFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTT 283 (493)
T ss_pred ccCHHHHHHHHh-hcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeC
Confidence 899999999997 56677777777766 558899999999987 999999999975432211110 0011234599999
Q ss_pred CchhhcccccchheeEcCHHHHHHHHHhc
Q 019868 281 FSKRAGLAGLRVGYGAFPLSIIEYLWRAK 309 (334)
Q Consensus 281 ~SK~~gl~G~R~G~l~~~~~~i~~l~~~~ 309 (334)
++|++ .|.+.|++++++++++.+.+..
T Consensus 284 ~hKaL--~GP~GG~I~~~~~l~~~L~~a~ 310 (493)
T PRK13580 284 THKTL--RGPRGGLVLAKKEYADAVDKGC 310 (493)
T ss_pred Chhhc--cCCCeEEEEecHHHHHHHhhCC
Confidence 99986 3555699999999999886554
No 281
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.29 E-value=4.8e-11 Score=115.81 Aligned_cols=191 Identities=18% Similarity=0.106 Sum_probs=137.2
Q ss_pred CCCHHHHHHHhc-CcC--C--CCCCCc-C-hHHHHHHHHHhcCCC-C-CCEEE--eCCHHHHHHHHHHHhc--------C
Q 019868 108 GPPPEVREALGQ-LKF--P--YIYPDP-E-SRRLRAALAKDSGLE-S-DHILV--GCGADELIDLIMRCVL--------D 168 (334)
Q Consensus 108 ~~~~~v~~al~~-~~~--~--~~Yp~~-g-~~~lr~~lA~~~~~~-~-~~I~~--t~G~~~~i~~~~~~l~--------~ 168 (334)
++.|++.+.+.. +.. . ..+|.. . .++.++.+++++|++ + +++.. |+|+++++.+.+.+.. .
T Consensus 52 ~~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~ 131 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEA 131 (431)
T ss_pred CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667776654 221 1 112221 1 356888889999987 3 45655 8999999998876542 1
Q ss_pred CC-----CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868 169 PG-----DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (334)
Q Consensus 169 ~g-----d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (334)
.| ..|+++.-.|.++...++..|++++.+|.+++ +.+|+++|+++++ +++.+|+++..+|.||.+.|.+++.+
T Consensus 132 ~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~-~~t~lV~~t~g~t~tG~idpi~~I~~ 210 (431)
T TIGR01788 132 AGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVIDPEQVVEAVD-ENTIGVVCILGTTYTGEYEDVKALND 210 (431)
T ss_pred cCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceeeCHHHHHHHHh-hCCeEEEEEeCCCCCcccCCHHHHHH
Confidence 12 36899999999999999999999999997654 5899999999997 67889999999999999999999999
Q ss_pred HHhC-------CCeEEEccCCcCccC---CCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 243 ILEM-------PILVVLDEAYTEFSG---LESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 243 l~~~-------~~~lIvDeay~~~~~---~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+++. ++++.+|.+|+.+.. .+.....+....-..+.-|.+|.+ +....+|.+++.++
T Consensus 211 i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~-~~P~g~G~l~~r~~ 277 (431)
T TIGR01788 211 ALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYG-LVYPGVGWVIWRDE 277 (431)
T ss_pred HHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhcc-CCCCCcEEEEEeCh
Confidence 9963 699999999986431 111111122233456888999953 33445899988543
No 282
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.28 E-value=7.2e-11 Score=113.21 Aligned_cols=188 Identities=11% Similarity=0.006 Sum_probs=132.1
Q ss_pred CCCCCCHH-HHHHHhcCcC--CCCCCCc--ChHHHHHHHHHhcCCC-CCCEEEeC-CHHHHHHHHHHHhcCC-CCEEEEc
Q 019868 105 NPYGPPPE-VREALGQLKF--PYIYPDP--ESRRLRAALAKDSGLE-SDHILVGC-GADELIDLIMRCVLDP-GDKIVDC 176 (334)
Q Consensus 105 ~~~~~~~~-v~~al~~~~~--~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~t~-G~~~~i~~~~~~l~~~-gd~Vl~~ 176 (334)
-|..+++. +++++..-.. .++-+.. -..+.|+.++++++++ +++|+++. ++|.+++.++..++++ ++.|+.
T Consensus 19 Gp~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~- 97 (378)
T PRK03080 19 GPCKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA- 97 (378)
T ss_pred CCcCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-
Confidence 35556677 8888875211 1332322 2678999999999984 45799876 8999999999998875 445554
Q ss_pred CCCChh-HHH-HHHHCCC-eEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEc
Q 019868 177 PPTFTM-YEF-DAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLD 253 (334)
Q Consensus 177 ~p~y~~-~~~-~~~~~G~-~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvD 253 (334)
.-.|+. +.. .++..|+ +++.++.+.+..+|++++ + .++.|.+++..|.||...+.+++.+ .+.++++|+|
T Consensus 98 ~g~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i----~--~~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVD 170 (378)
T PRK03080 98 WESFGSKWATDVVKQLKLEDPRVLEADYGSLPDLSAV----D--FDRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICD 170 (378)
T ss_pred eCHHHHHHHHHHHhhcCCCCceEeccCCCCCCCHhhc----C--CCCCEEEEecCCccceeccchhhcc-ccCCCeEEEe
Confidence 446654 222 2356788 888888666667787763 2 2567899999999999999999888 2239999999
Q ss_pred cCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHH
Q 019868 254 EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWR 307 (334)
Q Consensus 254 eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~ 307 (334)
.+.+-....-.. . + -.+++.|..|.++. -..+|+++++++.++.+..
T Consensus 171 a~qs~G~~pidv-~---~--iD~~~~s~~K~l~~-P~G~g~l~v~~~~~~~~~p 217 (378)
T PRK03080 171 ATSAAFALPLDW-S---K--LDVYTFSWQKVLGG-EGGHGMAILSPRAVERLES 217 (378)
T ss_pred cccccccCCCCH-H---H--CcEEEEehhhhCCC-CCceEEEEECHHHHHhhhc
Confidence 988754322111 1 1 24999999997753 1348999999988877653
No 283
>PRK15029 arginine decarboxylase; Provisional
Probab=99.27 E-value=2.9e-10 Score=116.15 Aligned_cols=167 Identities=16% Similarity=0.109 Sum_probs=128.6
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~-- 203 (334)
|..-..+..+..|+.||.+ ...++++|++.++..++.+++++||+|+++..+|-+....+.+.|++++++... +.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~-~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 203 HTGAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred CCcHHHHHHHHHHHHhCCC-cEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 4444789999999999975 468889999999999999999999999999999999888889999999998632 222
Q ss_pred --CCC-----HHHHHHhccc-CCce--------EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCc
Q 019868 204 --SLN-----VELIADAVER-EKPK--------CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESR 265 (334)
Q Consensus 204 --~~d-----~~~l~~~l~~-~~~~--------~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~ 265 (334)
.++ ++.+++++++ +..+ +++|++|+. .|.+++.+++.++++. ++.|++||||... .+.+..
T Consensus 282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~ 360 (755)
T PRK15029 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_pred ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence 334 8889888753 2233 899999986 8999999999999987 9999999999653 333221
Q ss_pred h--hhh-----cCCCc-EEEEcCCchhhcccccchh-eeEc
Q 019868 266 M--EWV-----KKHDN-LIVLRTFSKRAGLAGLRVG-YGAF 297 (334)
Q Consensus 266 ~--~~~-----~~~~~-~i~i~S~SK~~gl~G~R~G-~l~~ 297 (334)
. ..+ ...+. ++++.|.+|++ +++.-| ++.+
T Consensus 361 p~~sa~~~~~~~~~Gad~~vvqStHKtL--~alTQaS~LHv 399 (755)
T PRK15029 361 ADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHV 399 (755)
T ss_pred cccccccccccccCCCceEEEEchhhcc--cchhhhhhhee
Confidence 1 111 11233 49999999985 566655 4444
No 284
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.26 E-value=1.2e-10 Score=108.15 Aligned_cols=208 Identities=19% Similarity=0.142 Sum_probs=145.9
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCC------CcC----hHH-HHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE----SRR-LRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp------~~g----~~~-lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
+.|.|=..||-. ++.+.++.... .+..+|| ... .+. ..+...+++|.+-.||...+|+.. ...
T Consensus 27 ~~ieLIASEN~~--S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~A-N~a 103 (413)
T COG0112 27 EHIELIASENFT--SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQA-NQA 103 (413)
T ss_pred hceeeeeccccC--CHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCccccCCCCchHH-HHH
Confidence 458886677753 57888887652 2333343 222 122 333444678998889999999865 455
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHH---HHCC--CeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDA---AVNG--AAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G--~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
++.++++|||+|+..+-.++.+.... ...| .+++.++.+ ++..+|.|++++...+.++|+|+.-.-..| ..+
T Consensus 104 v~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~--r~i 181 (413)
T COG0112 104 VYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS--RPI 181 (413)
T ss_pred HHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccc--ccc
Confidence 66669999999998887776554322 1223 355556644 668999999999998889999997643333 678
Q ss_pred cHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH-HHHHHHHHhcCCC
Q 019868 236 NDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY 312 (334)
Q Consensus 236 ~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~-~~i~~l~~~~~~~ 312 (334)
+-+++++|++. |.++++|.+|. ++...+.....+. ...++..|.+|+| .|.|.|.+.++. ++.+.+.+.-.+.
T Consensus 182 d~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTl--rGPrGG~Il~~~eel~kkin~aVFPg 257 (413)
T COG0112 182 DFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTL--RGPRGGIILTNDEELAKKINSAVFPG 257 (413)
T ss_pred CHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCC--CCCCceEEEeccHHHHHHhhhhcCCc
Confidence 99999999998 99999999984 3443222222222 2459999999986 799999999985 8888888877663
No 285
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.25 E-value=8.1e-11 Score=110.43 Aligned_cols=234 Identities=17% Similarity=0.201 Sum_probs=158.1
Q ss_pred hCCCCCCeeecCCC--CCCCC-CCHHHHHHHhcC-----cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 90 LGRKPEDIVKIDAN--ENPYG-PPPEVREALGQL-----KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 90 ~~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~~-----~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
+..+++.+|||..| .+.++ .+|.+++++++. ...+.|.++...+|-+.|++..+ ..+.|+++|+++|+++.
T Consensus 37 ~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~-~~d~vff~NSGaEA~Ea 115 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSP-FADRVFFCNSGAEANEA 115 (404)
T ss_pred ECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCc-cccEEEEcCCcHHHHHH
Confidence 45578889998766 45555 679999998752 22356766667788888888887 68899999999999999
Q ss_pred HHHHhc---C-C-CCEEEEcCCCChhHHHHHHHCCCeEEEe----eCCCCCC----CCHHHHHHhcccCCceEEEEeCCC
Q 019868 162 IMRCVL---D-P-GDKIVDCPPTFTMYEFDAAVNGAAVVKV----PRKSDFS----LNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 162 ~~~~l~---~-~-gd~Vl~~~p~y~~~~~~~~~~G~~v~~v----~~~~~~~----~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
+++.-. . + ..+|+....+|..-...+-..+.+..+- |..+++. =|+++++++++ +++.+|++.-..
T Consensus 116 AiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~-~~taAvivEPIQ 194 (404)
T COG4992 116 ALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAID-EDTAAVIVEPIQ 194 (404)
T ss_pred HHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhc-cCeEEEEEeccc
Confidence 998432 2 2 2477777777753222221122222110 1111111 17899999998 589999998778
Q ss_pred CccccCCcHHH----HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 229 NPDGSIINDED----LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 229 NPtG~~~~~~~----l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
--.|...+.++ +++||+. |+++|.||++.++...+.....- .++-.--|-++.|.+| .|+.+|.+++.+.+.+
T Consensus 195 GEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e-~~gV~PDI~tlaK~Lg-GG~PigA~la~~~~~~ 272 (404)
T COG4992 195 GEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYE-HYGVEPDILTLAKALG-GGFPIGAMLATEEIAS 272 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHH-HhCCCCCEEEeecccc-CCccceeeEEchhhhh
Confidence 88888876543 3455665 99999999999987655443321 1111122335899998 8899999999955555
Q ss_pred HHH--HhcCCCCCcHHHHHHHHHHhc
Q 019868 304 YLW--RAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 304 ~l~--~~~~~~~~~~~~q~aa~~~L~ 327 (334)
.+. .....|+-|+++.+++.++|+
T Consensus 273 ~~~~G~HgSTfGGNpLacAv~~a~l~ 298 (404)
T COG4992 273 AFTPGDHGSTFGGNPLACAVALAVLE 298 (404)
T ss_pred cCCCCcccCCCCcCHHHHHHHHHHHH
Confidence 443 233348889999999888775
No 286
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.25 E-value=2.3e-10 Score=110.28 Aligned_cols=230 Identities=15% Similarity=0.134 Sum_probs=141.2
Q ss_pred CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-CCCCCCcChHHHHHHHHHhcCC--CCCCEEEeCCHHHHHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PYIYPDPESRRLRAALAKDSGL--ESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~~Yp~~g~~~lr~~lA~~~~~--~~~~I~~t~G~~~~i~~~~~ 164 (334)
.+++.++|+..+ ...++ ..|++.+++.+ +.. .+.++ ....+...++|+.+.- ..+.++++++++++...+++
T Consensus 33 ~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik 111 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIK 111 (395)
T ss_pred CCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHH
Confidence 356788999764 33343 35888888765 221 11111 1223445555555531 24689999999999999998
Q ss_pred Hhc------CCC-CEEEEcCCCChhHHHHH-HHCCCeEE---EeeCCCCC----CCCHHHHHHhcccCCceEEEEeCCCC
Q 019868 165 CVL------DPG-DKIVDCPPTFTMYEFDA-AVNGAAVV---KVPRKSDF----SLNVELIADAVEREKPKCIFLTSPNN 229 (334)
Q Consensus 165 ~l~------~~g-d~Vl~~~p~y~~~~~~~-~~~G~~v~---~v~~~~~~----~~d~~~l~~~l~~~~~~~i~l~~p~N 229 (334)
... ++| .+|+..+..|......+ ...|.... ..|...++ ..|++.+++.+. +++.+|++...++
T Consensus 112 ~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~aavi~Epv~~ 190 (395)
T PRK03715 112 LARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLIT-DKTVAVMLEPVQG 190 (395)
T ss_pred HHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcC-CCceEEEEeCCcC
Confidence 654 123 57888888776544333 23332211 11111111 247899999886 5688888886677
Q ss_pred ccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 230 PDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 230 PtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
..|...+ .+++.++++. ++++|+||+|.+|...+.... ..+- ..+ +.+|+|.+| .|+.+|.+++++++.
T Consensus 191 ~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv-~PD--i~t~gK~lg-~G~p~~av~~~~~i~ 266 (395)
T PRK03715 191 EGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGI-EPD--IMTLGKGIG-GGVPLAALLAKAEVA 266 (395)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCC-CCc--eeeehhhhh-CCcceEEEEEccccc
Confidence 7787765 5566666665 999999999998754333211 1111 122 347899998 678899999988875
Q ss_pred HHHHH-hcCCCCCcHHHHHHHHHHhc
Q 019868 303 EYLWR-AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 303 ~~l~~-~~~~~~~~~~~q~aa~~~L~ 327 (334)
..... ....|+.++++.+++.+.|+
T Consensus 267 ~~~~~~~~~T~~g~pl~~aaala~L~ 292 (395)
T PRK03715 267 VFEAGDQGGTYNGNPLMTAVGVAVIS 292 (395)
T ss_pred cccCCCcCCCCCCCHHHHHHHHHHHH
Confidence 32111 12236778888888877764
No 287
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.25 E-value=9.9e-10 Score=105.94 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=124.1
Q ss_pred CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh-hHHHHHHHCCCeEEEee---
Q 019868 124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVP--- 198 (334)
Q Consensus 124 ~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~--- 198 (334)
..| .++...+|++++++++|.+ +++.++.++.++.+++...++|||+| +..+|. .....+...|+..+.+.
T Consensus 72 d~Yagd~s~~~LE~~vAe~lG~e--~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 72 EAYAGSRNFYHLEETVQEYYGFK--HVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDE 147 (460)
T ss_pred hhhcCCCcHHHHHHHHHHHHCCC--eEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEeeeccc
Confidence 447 5668999999999999965 69999999999998877678999975 444443 33333667888666553
Q ss_pred -------CCCCCCCCHHHHHHhcccC---CceEEEEeCCCCcc-ccCCcHHH---HHHHHhC-CCeEEEccCCcCc----
Q 019868 199 -------RKSDFSLNVELIADAVERE---KPKCIFLTSPNNPD-GSIINDED---LLKILEM-PILVVLDEAYTEF---- 259 (334)
Q Consensus 199 -------~~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~NPt-G~~~~~~~---l~~l~~~-~~~lIvDeay~~~---- 259 (334)
...++.+|++++++++++. ++++|.+.+++|.. |+..+.++ +.++++. |+.||+|.+....
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 1346789999999999742 34467777888988 68886644 4555555 9999999987532
Q ss_pred c------CCCCchhh-hc--CCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhcC
Q 019868 260 S------GLESRMEW-VK--KHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQ 310 (334)
Q Consensus 260 ~------~~~~~~~~-~~--~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~ 310 (334)
. +.+..... +. ..--..++.|++|.++.+- .|+++. ++++.++++...-
T Consensus 228 I~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~--GG~i~t~D~eL~~~~r~~~~ 286 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI--GGFLAMNDEELFDEAKELVV 286 (460)
T ss_pred hcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC--ceEEEECCHHHHHHHHHhcc
Confidence 1 11111110 00 0123477788999876541 378777 6788888877743
No 288
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.23 E-value=8.1e-10 Score=102.30 Aligned_cols=255 Identities=17% Similarity=0.131 Sum_probs=159.3
Q ss_pred CCChHHHHHhhhhCCCCCCC---cHHHHHHHh------CCC-CCCe-eecCCCCCCCCCCHHHHHHHhc-Cc-CCCCC--
Q 019868 62 TGDSFIRSHLRKLKPYQPIL---PFEVLSIQL------GRK-PEDI-VKIDANENPYGPPPEVREALGQ-LK-FPYIY-- 126 (334)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~-~~~~-i~l~~~~~~~~~~~~v~~al~~-~~-~~~~Y-- 126 (334)
+.+.|+++.+.+-+-....+ .+..++..+ ... .+++ +.-+.......-.|+|.+|+.+ ++ ++.+-
T Consensus 128 ~Yd~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGG 207 (570)
T KOG1360|consen 128 DYDRFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGG 207 (570)
T ss_pred cHHHHHHHHHHhhhccchhHHHHHHhHhhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcCC
Confidence 45677888776644433222 333333332 111 1222 2222222344567899988876 32 21111
Q ss_pred -----CC-cChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEee
Q 019868 127 -----PD-PESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (334)
Q Consensus 127 -----p~-~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~ 198 (334)
+. .-..+|.+.+|++.+-+. -+++++. --+.+..+..|. -||-+|+-..-.+.....-.+..++.-+.+.
T Consensus 208 TRNIsG~s~~hv~LE~eLA~LHqK~a-ALlFsSC-fVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFr 285 (570)
T KOG1360|consen 208 TRNISGHSKHHVRLEAELADLHQKEA-ALLFSSC-FVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFR 285 (570)
T ss_pred ccccCCCCchhhhHHHHHHHHhcCcc-eeeeeee-eeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeec
Confidence 11 114589999999987332 3333222 122222222222 3788888878888877777777776544444
Q ss_pred CCCCCCCCHHHHHHhccc---CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhh----c
Q 019868 199 RKSDFSLNVELIADAVER---EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWV----K 270 (334)
Q Consensus 199 ~~~~~~~d~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~----~ 270 (334)
. + |++.|++.++. ..+|+|-+.+.+..+|.+.+.||+.++++. |.+-++||+++-..+++.-.... -
T Consensus 286 H--N---D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGv 360 (570)
T KOG1360|consen 286 H--N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGV 360 (570)
T ss_pred c--C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCc
Confidence 3 2 67777777653 457899999999999999999999999998 99999999997654432211111 1
Q ss_pred CCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCCC----CCcHHHHHHHHHHh
Q 019868 271 KHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPY----NVSVAAEVAACAAL 326 (334)
Q Consensus 271 ~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~~----~~~~~~q~aa~~~L 326 (334)
...-.|+.+++.|.||+-| ||+.+...+++.++.+...| +.++.....|+.+.
T Consensus 361 m~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaV 417 (570)
T KOG1360|consen 361 MHKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAV 417 (570)
T ss_pred chhhhhcccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHH
Confidence 2334599999999999999 99999999999998877652 45565555444443
No 289
>PLN02271 serine hydroxymethyltransferase
Probab=99.23 E-value=1.1e-09 Score=107.44 Aligned_cols=196 Identities=16% Similarity=0.082 Sum_probs=133.4
Q ss_pred CCeeecCCCCCCCCCCHHHHHHHhcC---cCCCCCC------CcC-hHHH----HHHHHHhcCCCC----CCEEEeCCHH
Q 019868 95 EDIVKIDANENPYGPPPEVREALGQL---KFPYIYP------DPE-SRRL----RAALAKDSGLES----DHILVGCGAD 156 (334)
Q Consensus 95 ~~~i~l~~~~~~~~~~~~v~~al~~~---~~~~~Yp------~~g-~~~l----r~~lA~~~~~~~----~~I~~t~G~~ 156 (334)
.+-|.|=..||-. ++.+++++... .+..+|| ... ..++ .+...+.++++. .||..-+|+
T Consensus 148 ~~~l~LIASEN~~--S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs- 224 (586)
T PLN02271 148 FKGIELIASENFV--CRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCT- 224 (586)
T ss_pred hcCeeeccccccC--CHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHH-
Confidence 3457887777754 58888888752 2333333 211 1222 233445678776 577777665
Q ss_pred HHHHHHHHHhcCCCCEEEEcCCCChhHHHH---------HHHCCCeEEEee--C-CCCCCCCHHHHHHhcccCCceEEEE
Q 019868 157 ELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---------AAVNGAAVVKVP--R-KSDFSLNVELIADAVEREKPKCIFL 224 (334)
Q Consensus 157 ~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~---------~~~~G~~v~~v~--~-~~~~~~d~~~l~~~l~~~~~~~i~l 224 (334)
.+...++.+|++|||+|+..+..|+.+... +...|..+..++ . ++++.+|++++++.....++|+|++
T Consensus 225 ~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~ 304 (586)
T PLN02271 225 SANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILIC 304 (586)
T ss_pred HHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEE
Confidence 566677778999999999988888755432 233455444444 4 3567899999999555589999999
Q ss_pred eCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCc-cCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868 225 TSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEF-SGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 225 ~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~-~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
..-.|| ..++.+++.+|++. ++++++|.++.-. ...+.....+. ...++..|.+|++ .|-|.|.+..++
T Consensus 305 g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~--~aDvvt~TTHKtL--rGPrGG~I~~r~ 375 (586)
T PLN02271 305 GGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFD--YCDIVTSTTHKSL--RGPRGGIIFYRK 375 (586)
T ss_pred Cchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCc--CCcEEEeCCcccC--CCCCceEEEecc
Confidence 877888 78999999999997 9999999999643 22211111111 2459999999975 688889998865
No 290
>PRK06541 hypothetical protein; Provisional
Probab=99.22 E-value=9.1e-10 Score=108.07 Aligned_cols=233 Identities=17% Similarity=0.181 Sum_probs=143.2
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.+||+..+ ...++ .+|++.+++.+ +... ..|+.+...+|.+.|++..+-..+.++++++++++...
T Consensus 48 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~ 127 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVES 127 (460)
T ss_pred eCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHH
Confidence 3467788998766 23444 45888888765 3211 23444445677777777765334689999999999999
Q ss_pred HHHHhcC--------CCCEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCC-----CCCC--------H
Q 019868 162 IMRCVLD--------PGDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD-----FSLN--------V 207 (334)
Q Consensus 162 ~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~-----~~~d--------~ 207 (334)
+++.... ...+|+...-+|......+.. .|. .+..+|..+. +.-+ +
T Consensus 128 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (460)
T PRK06541 128 AWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA 207 (460)
T ss_pred HHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHH
Confidence 8884321 136788777777644332221 111 1222332111 1112 3
Q ss_pred HHHHHhccc--CCceEEEEeCC-CCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEE
Q 019868 208 ELIADAVER--EKPKCIFLTSP-NNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIV 277 (334)
Q Consensus 208 ~~l~~~l~~--~~~~~i~l~~p-~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~ 277 (334)
+.+++.++. .+..+.++..| .++.|.+.+ .+++.++++. ++++|+||+|..|...+..... .+- ...++
T Consensus 208 ~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDiv 286 (460)
T PRK06541 208 DRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDII 286 (460)
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEE
Confidence 567776642 23344444555 889999887 5555666665 9999999999877432222111 111 12233
Q ss_pred EcCCchhhccccc-chheeEcCHHHHHHHHHhc------CCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRAK------QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~~------~~~~~~~~~q~aa~~~L~ 327 (334)
+|+|.++ .|+ ++|++++++++.+.+.+.. ..++.++++.+++.+.|+
T Consensus 287 --t~gK~l~-~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~ 340 (460)
T PRK06541 287 --TCAKGIT-SGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLD 340 (460)
T ss_pred --Eeccccc-CCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 4999998 887 9999999999988775431 235678888888877764
No 291
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.20 E-value=5.9e-10 Score=99.80 Aligned_cols=176 Identities=19% Similarity=0.265 Sum_probs=129.3
Q ss_pred CCCCCcChHHHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcCCCCEEEE-cCCCChhHHHHHH----------HC
Q 019868 124 YIYPDPESRRLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLDPGDKIVD-CPPTFTMYEFDAA----------VN 190 (334)
Q Consensus 124 ~~Yp~~g~~~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~~gd~Vl~-~~p~y~~~~~~~~----------~~ 190 (334)
++|-+-|...|.+..|+.++.+.. +..+.+| |++|..++..+++|||+.+. ..--|....+..- .+
T Consensus 60 YGydD~GRdtLe~vyA~vf~aE~a~VRpq~isG-THAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~df 138 (416)
T COG4100 60 YGYDDLGRDTLERVYAQVFGAEAALVRPQIISG-THAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred CCccccchhHHHHHHHHHhccccceeeeeeecc-hhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHh
Confidence 555677888999999999987654 4445555 57899999899999999863 3445655555432 35
Q ss_pred CCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC------CCeEEEccCCcCccCCC
Q 019868 191 GAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM------PILVVLDEAYTEFSGLE 263 (334)
Q Consensus 191 G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~------~~~lIvDeay~~~~~~~ 263 (334)
|.....+|+..+..+|.+.+...++ +++|+|-+. +-..-.--.++.++++++++. ++++++|++|.+|....
T Consensus 139 gi~Y~~v~Lt~~gkiD~~~v~~~i~-~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~ 217 (416)
T COG4100 139 GIKYKAVPLTADGKIDIQAVKTAIS-DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK 217 (416)
T ss_pred CcceeecccccCCcccHHHHHHhcC-ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence 6778888887788999999999998 799999987 333323334677777777663 89999999999999654
Q ss_pred CchhhhcCCCcEEEEcCCchhhcccccc--hheeEcCHHHHHHHH
Q 019868 264 SRMEWVKKHDNLIVLRTFSKRAGLAGLR--VGYGAFPLSIIEYLW 306 (334)
Q Consensus 264 ~~~~~~~~~~~~i~i~S~SK~~gl~G~R--~G~l~~~~~~i~~l~ 306 (334)
.+... +..++.+|+-|+-| .|+- .||+++.++++++..
T Consensus 218 EPt~v----GaDliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 218 EPTHV----GADLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred Ccccc----chhhhccceeeCCC-CceeeccceeechHHHHHhhc
Confidence 43332 33588999999865 3332 389999999988653
No 292
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.20 E-value=1.1e-09 Score=106.75 Aligned_cols=228 Identities=16% Similarity=0.162 Sum_probs=144.9
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---CCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++..++|+..| ...++ .+|++.+++.+ +. ....| ..+...+|.+.|++...-..+.++++++++++.+.+
T Consensus 71 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~A 150 (442)
T TIGR03372 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAA 150 (442)
T ss_pred ECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHH
Confidence 3567888998776 44554 46888888765 32 22223 444456777777777653346799999999999999
Q ss_pred HHHhcC----CC-CEEEEcCCCChhHHHHHHHC-CCe------------EEEeeCCCCCCCCHHHHHHhccc-----CCc
Q 019868 163 MRCVLD----PG-DKIVDCPPTFTMYEFDAAVN-GAA------------VVKVPRKSDFSLNVELIADAVER-----EKP 219 (334)
Q Consensus 163 ~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~-G~~------------v~~v~~~~~~~~d~~~l~~~l~~-----~~~ 219 (334)
++.-.. .| .+|+...-.|......+... |-. +..+|. .|.+.+++.++. .++
T Consensus 151 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~-----~d~~~~~~~l~~~~~~~~~v 225 (442)
T TIGR03372 151 LKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF-----GDIEAMLKALNECKKTGDDV 225 (442)
T ss_pred HHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC-----CCHHHHHHHHHHHhcCCCcE
Confidence 884321 23 57888888776544332222 211 122221 256677666631 346
Q ss_pred eEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-cc
Q 019868 220 KCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-LR 291 (334)
Q Consensus 220 ~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-~R 291 (334)
.+|++.......|...+ .++++++++. ++++|+||++.+|...+.... ..+- ..+++ +++|.+| .| +.
T Consensus 226 AavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~lg-~G~~P 301 (442)
T TIGR03372 226 AAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGV-QPDIL--CLAKALG-GGVMP 301 (442)
T ss_pred EEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCC-CCCee--eehhhhc-CCccc
Confidence 67777655666788776 5666677766 999999999987754333211 1111 12233 4899997 67 68
Q ss_pred hheeEcCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhc
Q 019868 292 VGYGAFPLSIIEYLWR----AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 292 ~G~l~~~~~~i~~l~~----~~~~~~~~~~~q~aa~~~L~ 327 (334)
+|.+++.+++.+.+.. ....|+-|+++.+++.++|+
T Consensus 302 igavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~ 341 (442)
T TIGR03372 302 IGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATIN 341 (442)
T ss_pred ceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHH
Confidence 9999999998887732 12235668888888888774
No 293
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.19 E-value=3e-10 Score=108.19 Aligned_cols=207 Identities=20% Similarity=0.138 Sum_probs=125.6
Q ss_pred eeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCC------cC----hHH-HHHHHHHhcCCCCC----CEEEeCCHHHH
Q 019868 97 IVKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------PE----SRR-LRAALAKDSGLESD----HILVGCGADEL 158 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~------~g----~~~-lr~~lA~~~~~~~~----~I~~t~G~~~~ 158 (334)
-|+|-..||-. +|.+++++.. + .+..+||. .. .+. ..+.+.++++++++ +|-.-+| +.+
T Consensus 22 ~l~LiaSEN~~--Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SG-s~A 98 (399)
T PF00464_consen 22 TLNLIASENYM--SPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSG-SQA 98 (399)
T ss_dssp SEE-CTT-------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSH-HHH
T ss_pred CccccCccccc--CHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCc-hHH
Confidence 48887778754 5788888875 2 22233332 11 222 34445567898854 4444444 467
Q ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHH---HH-------HHCCCeEEEeeCC-CCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868 159 IDLIMRCVLDPGDKIVDCPPTFTMYEF---DA-------AVNGAAVVKVPRK-SDFSLNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~-------~~~G~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
...++.+|++|||+|+..++..+.+.. .. .....+.+.++.+ +++.+|.+++++.+++.++|+|++..-
T Consensus 99 n~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S 178 (399)
T PF00464_consen 99 NLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGAS 178 (399)
T ss_dssp HHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-S
T ss_pred HHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECch
Confidence 788888899999999988877754421 11 1134567777754 678999999999998889999998755
Q ss_pred CCccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcC-------
Q 019868 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFP------- 298 (334)
Q Consensus 228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~------- 298 (334)
+.| ..++.+++++|++. +.++++|-++. ++...+-....+. + ..++.+|..|+| +|-|.|.+..+
T Consensus 179 ~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~-~-ADvvt~sThKtl--~GPrggiI~~~~~~~~~~ 252 (399)
T PF00464_consen 179 SYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP-Y-ADVVTGSTHKTL--RGPRGGIILTNKGSKNVD 252 (399)
T ss_dssp STS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC-T-SSEEEEESSGGG---SSS-EEEEES-SEEEE-
T ss_pred hcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCccc-c-ceEEEeeccccc--cccCceEEEEcCCccccC
Confidence 544 66889999999987 99999999984 3332221111122 1 349999999986 79999999999
Q ss_pred -------HHHHHHHHHhcCCC
Q 019868 299 -------LSIIEYLWRAKQPY 312 (334)
Q Consensus 299 -------~~~i~~l~~~~~~~ 312 (334)
+++.+.+.+...+.
T Consensus 253 ~~~~~~~~~l~~~I~~avfP~ 273 (399)
T PF00464_consen 253 KKGKEIDEELAEKIDSAVFPG 273 (399)
T ss_dssp TTS-EEEHHHHHHHHHHHTTT
T ss_pred CcccccHHHHHHHhccccCCC
Confidence 88999999887773
No 294
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.19 E-value=1.9e-09 Score=106.03 Aligned_cols=200 Identities=17% Similarity=0.082 Sum_probs=124.0
Q ss_pred CeeecCCCCCCCCCCHHHHHHHhc-C--cCCCCCC------Cc-ChHHHHH----HHHHhcCCCCCCEEE---eCCHHHH
Q 019868 96 DIVKIDANENPYGPPPEVREALGQ-L--KFPYIYP------DP-ESRRLRA----ALAKDSGLESDHILV---GCGADEL 158 (334)
Q Consensus 96 ~~i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp------~~-g~~~lr~----~lA~~~~~~~~~I~~---t~G~~~~ 158 (334)
+-|+|-..||.. ++.+++++.. + .+..+|| .. ...++.+ ...+.++...+.+++ .++++.+
T Consensus 35 ~~l~liasen~~--s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~A 112 (475)
T PLN03226 35 KGLELIASENFT--SRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPA 112 (475)
T ss_pred cCeeEecCCccC--CHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHH
Confidence 458887788764 5778877765 2 2333332 11 1223332 244556766655544 2455567
Q ss_pred HHHHHHHhcCCCCEEEEcCC---CChhHHHHH---HHCCCeEE----EeeC-CCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868 159 IDLIMRCVLDPGDKIVDCPP---TFTMYEFDA---AVNGAAVV----KVPR-KSDFSLNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 159 i~~~~~~l~~~gd~Vl~~~p---~y~~~~~~~---~~~G~~v~----~v~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
...++.++++|||+|+..+. .|..+.... +..+.... .+.. .+++.+|++++++.+.+.++++|++. .
T Consensus 113 N~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~ 191 (475)
T PLN03226 113 NFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-A 191 (475)
T ss_pred HHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-c
Confidence 77788889999999998553 222221111 11122211 3332 35678999999999875678877653 3
Q ss_pred CCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 228 NNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 228 ~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
++ +|...|.+++.++++. +.++++|+++.-........... .....+++.|++|++ .|.+.|+++++++.+
T Consensus 192 S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p-~~~~Div~~t~hK~L--~GP~Gg~I~~~~~~~ 263 (475)
T PLN03226 192 SA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP-FEYCDVVTTTTHKSL--RGPRGGMIFFRKGPK 263 (475)
T ss_pred Cc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC-CCCCeEEEecCcccc--cCCCceEEEEchhhc
Confidence 33 7899999999999998 99999999986533211111110 113459999999986 355559999887654
No 295
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.17 E-value=3.3e-10 Score=101.10 Aligned_cols=204 Identities=18% Similarity=0.172 Sum_probs=144.9
Q ss_pred CCeeecCCCCC-CCCCCHHHHHHHhc-Cc-CC-----CCC--CCcC-hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 95 EDIVKIDANEN-PYGPPPEVREALGQ-LK-FP-----YIY--PDPE-SRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 95 ~~~i~l~~~~~-~~~~~~~v~~al~~-~~-~~-----~~Y--p~~g-~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
+++++|+.|+. .+...|++.++-++ +. ++ .++ .... ...|...||++.+ .|+.++.+.+..+...++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~--rED~ilypscfdANag~f 144 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHG--REDTILYPSCFDANAGAF 144 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhC--CCceEEeccccccchHHH
Confidence 45788877643 55667888877554 21 21 111 1122 4578889999998 346666677777888888
Q ss_pred HHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc---cCCceEEEEeCCCCccccCCcHHHH
Q 019868 164 RCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE---REKPKCIFLTSPNNPDGSIINDEDL 240 (334)
Q Consensus 164 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~~~~l 240 (334)
.++++|.|.|+-....+.....-.+.+. . -..+|+-.++..+. +.+-|+|+........|.+.|.+++
T Consensus 145 eail~pedAvfSDeLNhASIIdGirLck----r-----y~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ei 215 (417)
T KOG1359|consen 145 EAILTPEDAVFSDELNHASIIDGIRLCK----R-----YRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLEEI 215 (417)
T ss_pred HHhcChhhhhhccccccchhhhhhHHHh----h-----hccchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHHHH
Confidence 8899999999988888887766555543 1 12345555554432 2466777777889999999999999
Q ss_pred HHHHhC-CCeEEEccCCcCccCCCC---chhh-hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC
Q 019868 241 LKILEM-PILVVLDEAYTEFSGLES---RMEW-VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP 311 (334)
Q Consensus 241 ~~l~~~-~~~lIvDeay~~~~~~~~---~~~~-~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~ 311 (334)
.+|++. +.++++||++.-+.++.. .... -.+.+.+++.++++|++| |.-.||..+|..+++.++....+
T Consensus 216 ~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~llrqr~Rp 289 (417)
T KOG1359|consen 216 SQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLISLLRQRSRP 289 (417)
T ss_pred HHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCChhHHHHHHhcCCc
Confidence 999998 999999999987664322 1111 124567799999999986 44449999999999999887776
No 296
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.17 E-value=1.8e-09 Score=105.56 Aligned_cols=233 Identities=15% Similarity=0.169 Sum_probs=141.6
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~ 160 (334)
..+++.++|+..+. ..++ ..|++.+++.+ +... . .|+.+...+|.+.|++..+-. .+.|+++++++++..
T Consensus 38 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e 117 (445)
T PRK08593 38 DVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDAND 117 (445)
T ss_pred eCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 34677889986652 2343 46888888765 3221 1 134444567888888877533 258999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHH-HCCC-------------eEEEeeCCCCCC-----CC-------HHHHHH
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA-------------AVVKVPRKSDFS-----LN-------VELIAD 212 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G~-------------~v~~v~~~~~~~-----~d-------~~~l~~ 212 (334)
.+++.-. ....+|+...-.|......+. ..+. .+..+|..+.+. .+ ++.+++
T Consensus 118 ~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 197 (445)
T PRK08593 118 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE 197 (445)
T ss_pred HHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHH
Confidence 9988422 223567777777765432222 1111 123333211110 11 234444
Q ss_pred hcc----cCCceEEEEeCCCCccccCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCC
Q 019868 213 AVE----REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTF 281 (334)
Q Consensus 213 ~l~----~~~~~~i~l~~p~NPtG~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~ 281 (334)
.+. .+++.+|++.......|... +.+.+ +++++. ++++|+||+|..|...+... ...+-.+ . +-++
T Consensus 198 ~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~p-D--i~t~ 274 (445)
T PRK08593 198 MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITP-D--LMSF 274 (445)
T ss_pred HHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCC-C--Eeee
Confidence 332 24577788776677778875 44444 445554 99999999998875433221 1111111 2 3378
Q ss_pred chhhcccccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868 282 SKRAGLAGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
+|.++ .|+++|++++++++.+.+.... ..++.++++++++.+.|+
T Consensus 275 gK~l~-~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~ 321 (445)
T PRK08593 275 GKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATID 321 (445)
T ss_pred ccccc-CCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHH
Confidence 99998 7899999999999988875322 236678888888887774
No 297
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.16 E-value=1.9e-09 Score=109.38 Aligned_cols=167 Identities=14% Similarity=0.209 Sum_probs=123.8
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH-HHHCCCeEEEeeCC-CCC-
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD-AAVNGAAVVKVPRK-SDF- 203 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~G~~v~~v~~~-~~~- 203 (334)
|..-..+..+..|+.||.+ .-.++++|++.++..++.+++.+||+|++...+|-+..+. ..+.|++++++... +.+
T Consensus 172 ~eG~i~eAq~~AA~~fgAd-~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~G 250 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNAD-KTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFG 250 (720)
T ss_pred CChHHHHHHHHHHHHhCCC-ceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccccC
Confidence 4444778999999999975 4678899999999999999999999999999999987774 77899999998732 223
Q ss_pred ---CCCH-----HHHHHhcccC--------C-ceEEEEeCCCCccccCCcHHHHHHHH-hCCCeEEEccCCcCcc-CCCC
Q 019868 204 ---SLNV-----ELIADAVERE--------K-PKCIFLTSPNNPDGSIINDEDLLKIL-EMPILVVLDEAYTEFS-GLES 264 (334)
Q Consensus 204 ---~~d~-----~~l~~~l~~~--------~-~~~i~l~~p~NPtG~~~~~~~l~~l~-~~~~~lIvDeay~~~~-~~~~ 264 (334)
.++. +.+++++++. + .++++|++|+. .|.+++.+++.+++ +....|++||||.... +.+.
T Consensus 251 i~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~~llvDEAhgah~~F~p~ 329 (720)
T PRK13578 251 FIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCDYILFDSAWVGYEQFIPM 329 (720)
T ss_pred CcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCCcEEEeCcchhhhccCcc
Confidence 3454 4477777532 1 58999999986 89999999999984 5533999999996543 3221
Q ss_pred ---ch----hhhcCCCcEEEEcCCchhhcccccchh-eeEc
Q 019868 265 ---RM----EWVKKHDNLIVLRTFSKRAGLAGLRVG-YGAF 297 (334)
Q Consensus 265 ---~~----~~~~~~~~~i~i~S~SK~~gl~G~R~G-~l~~ 297 (334)
.. ....+..-++++.|.+|.+ +++--+ ++..
T Consensus 330 ~~~~p~~al~~GaD~p~i~v~QStHKtL--~alTQaS~LHv 368 (720)
T PRK13578 330 MADCSPLLLELNENDPGIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred cccCChhhhhcCCCCCCeEEEEChhhcc--hhhhhHhhhhc
Confidence 11 1111234569999999985 465544 5545
No 298
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.15 E-value=2.3e-09 Score=104.84 Aligned_cols=232 Identities=16% Similarity=0.179 Sum_probs=139.0
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CC--CCCCcChHHHHHHHHHhcCCC--CCC-EEEeCCHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLE--SDH-ILVGCGADEL 158 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Yp~~g~~~lr~~lA~~~~~~--~~~-I~~t~G~~~~ 158 (334)
..+++.+||+..|. ..++ .+|++.+++.+ +.. .+ .|+.+...+|-+.|++..+-. ... ++++++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA 114 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADA 114 (442)
T ss_pred eCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHH
Confidence 45677899997763 3333 46888888775 322 11 134444566777777766421 134 4556889999
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCCC--------CH----HHHH
Q 019868 159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFSL--------NV----ELIA 211 (334)
Q Consensus 159 i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~~--------d~----~~l~ 211 (334)
...+++... ....+|+...-+|......+.. .| ..+..++..+.+.. +. +.++
T Consensus 115 ~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (442)
T TIGR00709 115 VEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194 (442)
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 999988432 2236788888878655433332 22 01222332111111 11 1123
Q ss_pred Hhcc-----cCCceEEEEeCC-CCccccCCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEc
Q 019868 212 DAVE-----REKPKCIFLTSP-NNPDGSIINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR 279 (334)
Q Consensus 212 ~~l~-----~~~~~~i~l~~p-~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~ 279 (334)
+.+. ..++.+|++... +|+....++.+.++++.+. ++++|.||+|.+|...+.... ..+- ..++++
T Consensus 195 ~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~- 272 (442)
T TIGR00709 195 NFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVV- 272 (442)
T ss_pred HHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEE-
Confidence 3332 135677777744 4554445788888777654 999999999999865443222 1111 223444
Q ss_pred CCchhhcccccchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 280 S~SK~~gl~G~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~ 327 (334)
++|.++. |+++|+++++++ ++.+.. ....|+.++++++++.++|+
T Consensus 273 -~gK~l~~-G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~ 319 (442)
T TIGR00709 273 -MSKAVGG-GLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALN 319 (442)
T ss_pred -EcccccC-CcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHH
Confidence 8999985 899999999888 454422 12347789999999999885
No 299
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.15 E-value=7.1e-10 Score=105.12 Aligned_cols=158 Identities=13% Similarity=0.046 Sum_probs=117.4
Q ss_pred hHHHHHHHHHhcCCC-CCCEEEeCC-HHHHHHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCC----CC
Q 019868 131 SRRLRAALAKDSGLE-SDHILVGCG-ADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRK----SD 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~-~~~I~~t~G-~~~~i~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~----~~ 202 (334)
..++|+.++++++.+ ..+|++++| +|.+++.++..++.+||++++..-+.. .+...++..|+ +..+..+ ..
T Consensus 39 ~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~ 117 (349)
T TIGR01364 39 ANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYT 117 (349)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCC
Confidence 457788888899973 346888877 999999999999999999887765443 34567778898 6666632 22
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCC
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTF 281 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~ 281 (334)
..+|+++++. + +++++|.+++-.+.||...+ ++++. ++++++|.+.+-....-. +++.+ +++.|.
T Consensus 118 ~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id----~~~~d--~~~~ss 183 (349)
T TIGR01364 118 KIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPID----VSKFG--LIYAGA 183 (349)
T ss_pred CCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCC----HHHcc--EEEEec
Confidence 3466666552 3 57899999999999999876 55555 899999998864332111 12233 899999
Q ss_pred chhhcccccchheeEcCHHHHHHH
Q 019868 282 SKRAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 282 SK~~gl~G~R~G~l~~~~~~i~~l 305 (334)
.|.||.+| +|+++++++.++++
T Consensus 184 qK~lgP~G--lg~l~~s~~~~~~~ 205 (349)
T TIGR01364 184 QKNIGPAG--LTVVIVRKDLLGRA 205 (349)
T ss_pred ccccCCCc--eEEEEECHHHHhhc
Confidence 99998776 79999999888755
No 300
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.15 E-value=1.1e-09 Score=113.79 Aligned_cols=168 Identities=16% Similarity=0.126 Sum_probs=123.3
Q ss_pred hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH---HHHHhc-----CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC
Q 019868 131 SRRLRAALAKDSGLESDHILVGCGADELIDL---IMRCVL-----DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~---~~~~l~-----~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~ 202 (334)
..++.+.+++..|.+...+....|+. +-.. +++... ...++|+++.-.|+.....+...|++++.++.+++
T Consensus 532 i~elq~~l~eltGmd~~Sl~p~aGA~-gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~ 610 (939)
T TIGR00461 532 IAQLEKWLCSITGFDAISLQPNSGAQ-GEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD 610 (939)
T ss_pred HHHHHHHHHHHHCCCCcccCCchHHH-HHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC
Confidence 35788888889998843333333443 2222 223211 12368999999998777778889999999998778
Q ss_pred CCCCHHHHHHhccc--CCceEEEEeCCCCccccCCc-HHHHHHHHhC-CCeEEEccCCcC-ccCCCCchhhhcCCCcEEE
Q 019868 203 FSLNVELIADAVER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTE-FSGLESRMEWVKKHDNLIV 277 (334)
Q Consensus 203 ~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~-~~~lIvDeay~~-~~~~~~~~~~~~~~~~~i~ 277 (334)
+.+|+++|++++++ .++++|++++|+| +|.+-+ .+++.++++. +.++++|-++.. ... .....+.+-+++
T Consensus 611 G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~----l~~Pg~~GaDi~ 685 (939)
T TIGR00461 611 GNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG----LTSPGDLGADVC 685 (939)
T ss_pred CCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCC----CCCccccCCCEE
Confidence 89999999999974 4789999999999 899877 9999999987 899999999853 221 111234556799
Q ss_pred EcCCchhhc----ccccchheeEcCHHHHHH
Q 019868 278 LRTFSKRAG----LAGLRVGYGAFPLSIIEY 304 (334)
Q Consensus 278 i~S~SK~~g----l~G~R~G~l~~~~~~i~~ 304 (334)
+.|..|+|+ ..|-.+|++.+.+++...
T Consensus 686 ~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~ 716 (939)
T TIGR00461 686 HLNLHKTFCIPHGGGGPGMGPIGVKSHLIPF 716 (939)
T ss_pred EecCCccCCCCCCCCCCCeEEEEEhhhchhh
Confidence 999999775 346678999987665443
No 301
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.14 E-value=2.4e-09 Score=104.53 Aligned_cols=183 Identities=20% Similarity=0.186 Sum_probs=133.2
Q ss_pred CCCCCcC--hHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcC-----C---CC------EEEEcCCCChhHHHH
Q 019868 124 YIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLD-----P---GD------KIVDCPPTFTMYEFD 186 (334)
Q Consensus 124 ~~Yp~~g--~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~-----~---gd------~Vl~~~p~y~~~~~~ 186 (334)
..||... ..++-..++++++.+ .-.=.+|+|+++++.+.+.+..+ . +. +|+++.-.|.++...
T Consensus 94 ~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Ka 173 (460)
T COG0076 94 DESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKA 173 (460)
T ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHH
Confidence 4556332 234455556667774 34678899999999877765321 1 11 699999999999999
Q ss_pred HHHCCCeEEEeeCCC-CCCCCHHHHHHhcccCCce-EEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC--
Q 019868 187 AAVNGAAVVKVPRKS-DFSLNVELIADAVEREKPK-CIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-- 261 (334)
Q Consensus 187 ~~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~-~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-- 261 (334)
++..|.....++... ++.+|++++++++++.... +|+.+.++-+||.+=+.+++.+|++. ++++.+|.||+.|.-
T Consensus 174 a~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf 253 (460)
T COG0076 174 ARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPF 253 (460)
T ss_pred HHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecc
Confidence 999999999998655 7899999999999843333 27777889999999999999999998 999999999998762
Q ss_pred CCCchh-hhcCCCcEEEEcCCchhhcccccchheeEcCHH-HHHHHHH
Q 019868 262 LESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS-IIEYLWR 307 (334)
Q Consensus 262 ~~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~-~i~~l~~ 307 (334)
...... ......-.-+.-+++| ||++-..+||++..++ -......
T Consensus 254 ~~~~~~~~f~l~~vdSIt~d~HK-~g~aP~~~G~il~rd~e~l~~~~~ 300 (460)
T COG0076 254 LEPDGRWDFGLEGVDSITVDGHK-YGLAPIGCGVVLFRDEEALRRILI 300 (460)
T ss_pred cCccchhhcCCCCceEEEECccc-ccCCCCCceEEEEECHHHhhhhhh
Confidence 222222 2222334466779999 6778888999999543 3443433
No 302
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.14 E-value=5.3e-09 Score=101.93 Aligned_cols=232 Identities=15% Similarity=0.136 Sum_probs=146.5
Q ss_pred CCCCCCeeecCCCCC--CCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..+++.+||+..+.. .++ ..|++.+++.+ +... ..++.+...+|.+.|.+..+ ..+.++++++++++...+++
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p-~~~~v~f~~sGseA~e~Alk 127 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEIEFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIR 127 (428)
T ss_pred eCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHHHHHHHHHHhCC-CCcEEEEeCCHHHHHHHHHH
Confidence 346778899866633 344 45888888775 3322 23455555677777777665 34689999999999999988
Q ss_pred Hhc--CCCCEEEEcCCCChhHHHHHH-HCCCeEEE--------ee--CCCC----CCCCHHHHHHhccc--CCceEEEEe
Q 019868 165 CVL--DPGDKIVDCPPTFTMYEFDAA-VNGAAVVK--------VP--RKSD----FSLNVELIADAVER--EKPKCIFLT 225 (334)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G~~v~~--------v~--~~~~----~~~d~~~l~~~l~~--~~~~~i~l~ 225 (334)
.-. ....+|+...-.|......+. ..|..... ++ ...+ ..-|++.+++.+++ +++.+|++.
T Consensus 128 lAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 128 VARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred HHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 432 223678877777765443322 22211100 00 0000 01268888887752 345677776
Q ss_pred CCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCc-hhhhcCCCcEEEEcCCchhhcccccchheeEcCH
Q 019868 226 SPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESR-MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 226 ~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~-~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
-.....|.+.+ .++++++++. ++++|+||++..|...... ....+-.. .+ -+++|.+| .|+.+|.+++++
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~P-Di--vt~gK~lg-gG~Pi~av~~~~ 283 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEP-DL--TALGKIIG-GGLPIGAYGGRK 283 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCC-Ce--eeechhhc-CCCceeEEeEHH
Confidence 55666788776 5666777776 9999999999887221110 11111112 23 37899997 789999999999
Q ss_pred HHHHHHHH-----hcCCCCCcHHHHHHHHHHhc
Q 019868 300 SIIEYLWR-----AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 300 ~~i~~l~~-----~~~~~~~~~~~q~aa~~~L~ 327 (334)
++.+.+.. ....|+.|+++.+++.+.|+
T Consensus 284 ~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~ 316 (428)
T PRK12389 284 DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLE 316 (428)
T ss_pred HHHhhhccCCCcccccCCccCHHHHHHHHHHHH
Confidence 99887742 12236788988888888775
No 303
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.13 E-value=3.3e-09 Score=104.04 Aligned_cols=233 Identities=16% Similarity=0.179 Sum_probs=144.6
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---CC-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---PY-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..+++.++|+..| ...++ .+|++.+++.+ +.. .. .++.+...+|.+.|++...-..+.++++++++++...+
T Consensus 78 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 157 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAA 157 (459)
T ss_pred ECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHH
Confidence 3467788998776 44454 56888888775 321 12 23444556777888777654446899999999999999
Q ss_pred HHHhc----CCC-CEEEEcCCCChhHHHHHHH-CCCeEEE---eeCCCCC----CCCHHHHHHhccc-----CCceEEEE
Q 019868 163 MRCVL----DPG-DKIVDCPPTFTMYEFDAAV-NGAAVVK---VPRKSDF----SLNVELIADAVER-----EKPKCIFL 224 (334)
Q Consensus 163 ~~~l~----~~g-d~Vl~~~p~y~~~~~~~~~-~G~~v~~---v~~~~~~----~~d~~~l~~~l~~-----~~~~~i~l 224 (334)
++... ++| .+|+...-.|......+.. .|-.... .|...++ -.|.+.+++.++. .++.+|++
T Consensus 158 lklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIv 237 (459)
T PRK11522 158 LKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL 237 (459)
T ss_pred HHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEE
Confidence 88432 123 4678777777655433322 2211111 0100000 1267777777642 34557776
Q ss_pred eCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-cchheeE
Q 019868 225 TSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG-LRVGYGA 296 (334)
Q Consensus 225 ~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G-~R~G~l~ 296 (334)
.......|...+ .+.++++++. ++++|+||++.+|...+.... ..+- ..+++ +|+|.+| .| +.+|.++
T Consensus 238 Epv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDiv--t~gK~lg-gG~~Pigav~ 313 (459)
T PRK11522 238 EPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENV-QPDIL--CLAKALG-GGVMPIGATI 313 (459)
T ss_pred ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCC-CCCEE--Eechhhh-CCCccceeEE
Confidence 666666788776 5666667766 999999999987753332211 1111 12233 7899987 67 6899999
Q ss_pred cCHHHHHHHHH----hcCCCCCcHHHHHHHHHHhc
Q 019868 297 FPLSIIEYLWR----AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 297 ~~~~~i~~l~~----~~~~~~~~~~~q~aa~~~L~ 327 (334)
+.+++.+.+.. ....|+.++++.+++.+.|+
T Consensus 314 ~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~ 348 (459)
T PRK11522 314 ATEEVFSVLFDNPFLHTTTFGGNPLACAAALATIN 348 (459)
T ss_pred EcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHH
Confidence 99998886642 12235668888888877765
No 304
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.13 E-value=1e-09 Score=104.58 Aligned_cols=210 Identities=16% Similarity=0.093 Sum_probs=138.2
Q ss_pred CCCCCCCHHHHHHHhc-C-cC----------CCCCCCc--ChHHHHHHHHHhcCCC-CCCEEE-eCCHHHHHHHHHHHhc
Q 019868 104 ENPYGPPPEVREALGQ-L-KF----------PYIYPDP--ESRRLRAALAKDSGLE-SDHILV-GCGADELIDLIMRCVL 167 (334)
Q Consensus 104 ~~~~~~~~~v~~al~~-~-~~----------~~~Yp~~--g~~~lr~~lA~~~~~~-~~~I~~-t~G~~~~i~~~~~~l~ 167 (334)
--|...|+.|++++.. + +. .++-+.. -..+.++.++++++.+ ..+|++ +.+++.+++.++..++
T Consensus 9 pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~ 88 (360)
T PRK05355 9 AGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL 88 (360)
T ss_pred CCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC
Confidence 3355678999998765 2 11 1111221 2568889999999973 345655 4777888999999999
Q ss_pred CCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCC-CCCCCHHHHHH-hcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 168 DPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS-DFSLNVELIAD-AVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 168 ~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~-~~~~d~~~l~~-~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
.+||++++..-+.. .+...++.+|.. ..+..+. ....+..++++ .++ +++++|.+++-.+.||...+ .+.++
T Consensus 89 ~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~-~~~~~V~~th~eTstGv~~~--~i~~i 164 (360)
T PRK05355 89 GGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLS-DDAAYVHYTSNETIDGTEFH--ELPDT 164 (360)
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCC-CCCCEEEEccCCCcceEecC--ccccc
Confidence 99998887665443 345677778865 5554332 22344444444 665 57899999999999999984 23333
Q ss_pred HhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHh-c-------------
Q 019868 244 LEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------------- 309 (334)
Q Consensus 244 ~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-~------------- 309 (334)
.++++|+|.+.+-....-. +++.+ +++.|..|.||.+| +|+++++++.++++... .
T Consensus 165 --~g~l~vVDavss~g~~~id----v~~~d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 234 (360)
T PRK05355 165 --GDVPLVADMSSDILSRPID----VSKFG--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLDYKTHADNDS 234 (360)
T ss_pred --CCCcEEEEcCccccCccCC----HHHcc--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHHHHHHHhcCC
Confidence 4899999999874432111 12223 89999999998666 79999999888775441 1
Q ss_pred CCCCCcHHHHHHHHHHhc
Q 019868 310 QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 310 ~~~~~~~~~q~aa~~~L~ 327 (334)
.++++|.....+..++|+
T Consensus 235 ~~~Tp~~~~i~aL~~aL~ 252 (360)
T PRK05355 235 MYNTPPTFAIYLAGLVFK 252 (360)
T ss_pred ccCCCcHHHHHHHHHHHH
Confidence 124556666555555554
No 305
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.12 E-value=1.5e-09 Score=103.44 Aligned_cols=221 Identities=17% Similarity=0.235 Sum_probs=144.8
Q ss_pred CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
.+++.++|+..+. ..++ .+|++.+++++ +.. ...|+.....+|.+.++++.+. +.+++++++++++..++
T Consensus 21 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~~~--~~v~~~~SGseA~e~Al 98 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWVNY--EYVYMGNSGTEAVEAAL 98 (364)
T ss_pred CCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhcCC--CEEEEeCchHHHHHHHH
Confidence 4577889986653 3444 44778888765 221 2335555567888888888754 58999999999999999
Q ss_pred HHhc-CCC-CEEEEcCCCChhHHHHHHHC--------CCe-----EEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868 164 RCVL-DPG-DKIVDCPPTFTMYEFDAAVN--------GAA-----VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 164 ~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~--------G~~-----v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
+... .+| ++|+...-+|......+... +.. +..+| + .|++.+++.+. +++.+|++....
T Consensus 99 klar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~----~-~d~~~l~~~i~-~~~aAvivEpi~ 172 (364)
T PRK04013 99 KFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIP----F-NDVEAAKEAIT-KETAAVIFEPIQ 172 (364)
T ss_pred HHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEec----C-CCHHHHHHHhc-CCcEEEEEcCCc
Confidence 8543 244 88998888887544332221 111 11122 1 26788998886 578898887666
Q ss_pred CccccCC-c---HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEcCCchhhcccccchheeEcCHHH
Q 019868 229 NPDGSII-N---DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSI 301 (334)
Q Consensus 229 NPtG~~~-~---~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~ 301 (334)
...|... + .++++++++. ++++|+||++.++ ..+..... .+-.+. ++ +++|.+| .|+.+|.++.++++
T Consensus 173 g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv~PD-iv--~~gK~lg-gG~P~~a~~~~~~~ 247 (364)
T PRK04013 173 GEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPD-IV--TMGKGIG-NGVPVSLTLTNFDV 247 (364)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchhHHHhcCCCCC-EE--Eeccccc-CCceeEEEEecccc
Confidence 5556644 5 4566666766 9999999999987 43332221 122222 32 4699998 58889988887665
Q ss_pred HHHHHHhcCCCCCcHHHHHHHHHHhc
Q 019868 302 IEYLWRAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 302 i~~l~~~~~~~~~~~~~q~aa~~~L~ 327 (334)
.. ......|+.|+++.+++.+.|+
T Consensus 248 ~~--~~~~~T~~gnp~~~aaa~a~l~ 271 (364)
T PRK04013 248 ER--GKHGSTFGGNPLACKAVAVTLR 271 (364)
T ss_pred cC--CCcCCCCCcCHHHHHHHHHHHH
Confidence 21 1223347788988888888765
No 306
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.12 E-value=4.2e-09 Score=102.91 Aligned_cols=233 Identities=15% Similarity=0.159 Sum_probs=141.3
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~ 160 (334)
..++..++|+..|. ..++ ..|++.+++.+ +... ..|+.+...+|.+.|++..+-. .+.++++++++++..
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e 129 (441)
T PRK05769 50 DVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNE 129 (441)
T ss_pred eCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHH
Confidence 44677889987663 3444 45788887765 3211 1233334556777777766422 368999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCCCC-----C--------CHHHHH
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS-----L--------NVELIA 211 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~-----~--------d~~~l~ 211 (334)
.+++.-. ....+|+...-+|......+.. .|. .+..++..+.+. - +++.++
T Consensus 130 ~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 209 (441)
T PRK05769 130 AAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIE 209 (441)
T ss_pred HHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHH
Confidence 9988432 2336788777777654432222 111 122233211111 0 123355
Q ss_pred H-hcc----cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEc
Q 019868 212 D-AVE----REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR 279 (334)
Q Consensus 212 ~-~l~----~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~ 279 (334)
+ .++ ..++.+|++.......|...+ .+++.++++. ++++|+||++.+|...+.... ..+-.+ .++
T Consensus 210 ~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~p-Div-- 286 (441)
T PRK05769 210 DYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEP-DII-- 286 (441)
T ss_pred HHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCC-CEE--
Confidence 4 222 245667776655666788777 6666667766 999999999998754332211 111112 233
Q ss_pred CCchhhcccccchheeEcCHHHHHHHHHh-cCCCCCcHHHHHHHHHHhc
Q 019868 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWRA-KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 280 S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-~~~~~~~~~~q~aa~~~L~ 327 (334)
+|+|.++ .|+++|++++++++.+.+... ...++.++++++++.++|+
T Consensus 287 t~~K~l~-~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~ 334 (441)
T PRK05769 287 TLAKAIA-GGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLE 334 (441)
T ss_pred EEccccc-CCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 4899998 789999999998887543211 2236678899988888875
No 307
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.11 E-value=3.4e-09 Score=103.24 Aligned_cols=232 Identities=14% Similarity=0.095 Sum_probs=144.0
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..++..+||+..+. ..++ ..|++.+++++ +... ..++.+...+|-+.|.+.++...+.+.++++++++...+++
T Consensus 49 D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~Aik 128 (433)
T PRK00615 49 DSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVR 128 (433)
T ss_pred ECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHH
Confidence 34677889997663 3444 46888888765 3222 22344455677888887776444689999999999999988
Q ss_pred Hhc-CCC-CEEEEcCCCChhHHH---HHHHCCCeE-----EEe--e-CCCC---C-CCCHHHHHHhccc--CCceEEEEe
Q 019868 165 CVL-DPG-DKIVDCPPTFTMYEF---DAAVNGAAV-----VKV--P-RKSD---F-SLNVELIADAVER--EKPKCIFLT 225 (334)
Q Consensus 165 ~l~-~~g-d~Vl~~~p~y~~~~~---~~~~~G~~v-----~~v--~-~~~~---~-~~d~~~l~~~l~~--~~~~~i~l~ 225 (334)
.-. -.| .+|+...-+|..+.. .+...+... ..+ + .... + .-|++.+++.+.. .+..+|++.
T Consensus 129 lAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E 208 (433)
T PRK00615 129 LARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE 208 (433)
T ss_pred HHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence 432 123 577777777765431 111111000 000 0 0000 0 1267888887742 345566666
Q ss_pred CCCCccccCCcHH----HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcC--CCcEEEEcCCchhhcccccchheeEcC
Q 019868 226 SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKK--HDNLIVLRTFSKRAGLAGLRVGYGAFP 298 (334)
Q Consensus 226 ~p~NPtG~~~~~~----~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~--~~~~i~i~S~SK~~gl~G~R~G~l~~~ 298 (334)
......|...+.+ +++++++. ++++|+||++.+| ..+.. ..... -...++ +|+|.+| .|+.+|+++++
T Consensus 209 pv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~-ga~~~~gv~PDi~--~~gK~lg-gG~p~~av~~~ 283 (433)
T PRK00615 209 PICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQG-GAAAIYHVKPDIT--VYGKILG-GGLPAAAVVAH 283 (433)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHh-HHHHhcCCCCCeE--EEccccc-CCcceeeeeec
Confidence 5566678877754 77777776 9999999999877 22211 11111 122243 4899987 67889999999
Q ss_pred HHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868 299 LSIIEYLWRAK-----QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 299 ~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~ 327 (334)
+++++.+.... ..++.++++.+++.+.|+
T Consensus 284 ~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~ 317 (433)
T PRK00615 284 KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASIN 317 (433)
T ss_pred HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHH
Confidence 99998875321 235568888888888775
No 308
>PRK12403 putative aminotransferase; Provisional
Probab=99.09 E-value=1.1e-08 Score=100.56 Aligned_cols=233 Identities=15% Similarity=0.135 Sum_probs=139.4
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC-C--CC---CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-P--YI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~--~~---Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+- ..++ ..|++.+++++ ++. . .. ++.....+|.+.|++.++-..+.++++++++++..
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 129 (460)
T PRK12403 50 DNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHYSHAIYTNSGSEANE 129 (460)
T ss_pred eCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 44677899976552 2243 45888888765 322 1 11 12233567888888887644468999999999999
Q ss_pred HHHHHhc-------CCCCE-EEEcCCCChhHHH-HHHHCCCe-----------EEEeeCCCC----CCC--------CHH
Q 019868 161 LIMRCVL-------DPGDK-IVDCPPTFTMYEF-DAAVNGAA-----------VVKVPRKSD----FSL--------NVE 208 (334)
Q Consensus 161 ~~~~~l~-------~~gd~-Vl~~~p~y~~~~~-~~~~~G~~-----------v~~v~~~~~----~~~--------d~~ 208 (334)
.+++... ++++. |+...-+|..... .....|.. +..+|.... +.. +++
T Consensus 130 ~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (460)
T PRK12403 130 VLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAAL 209 (460)
T ss_pred HHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 9998653 23333 4444556654332 22222211 222321110 111 134
Q ss_pred HHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEE
Q 019868 209 LIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVL 278 (334)
Q Consensus 209 ~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i 278 (334)
.+++.+.+ +++.+|++.....-.|.+.+ .+++++|++. ++++|+||++..|...+.... ..+- ..++++
T Consensus 210 ~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~ 288 (460)
T PRK12403 210 QLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS 288 (460)
T ss_pred HHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE
Confidence 55555421 34556776655566688776 6777777776 999999999987754332211 1111 123443
Q ss_pred cCCchhhccccc-chheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~ 327 (334)
++|.+| .|. .+|.+++.+++.+.+... ...++.++++.+++.+.|+
T Consensus 289 --~gK~lg-gG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~ 341 (460)
T PRK12403 289 --IAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLK 341 (460)
T ss_pred --Eccccc-ccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 899987 674 888888999988877531 2236688888888888774
No 309
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.08 E-value=4.1e-10 Score=93.87 Aligned_cols=86 Identities=24% Similarity=0.499 Sum_probs=66.7
Q ss_pred CCCCeeecCCCCC-----------------CCCCCHHHHHHHhcCcCCCCCCC-cChHHHHHHHHHhc----C----CCC
Q 019868 93 KPEDIVKIDANEN-----------------PYGPPPEVREALGQLKFPYIYPD-PESRRLRAALAKDS----G----LES 146 (334)
Q Consensus 93 ~~~~~i~l~~~~~-----------------~~~~~~~v~~al~~~~~~~~Yp~-~g~~~lr~~lA~~~----~----~~~ 146 (334)
.+..+|+|+..|| ++.+++.++++..++ ..|++ .|..+||+++|+++ + +++
T Consensus 41 np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~---a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p 117 (153)
T PLN02994 41 NPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI---ALFQDYHGLANFRKAIANFMAEARGGRVKFDA 117 (153)
T ss_pred CCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH---hcCCCCCCcHHHHHHHHHHHHHHhCCCCccch
Confidence 3455777777665 334444545555442 23644 58999999999987 4 578
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~ 181 (334)
++|++|+|+++++..++.++++|||.|++++|+|+
T Consensus 118 d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 118 DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 89999999999999999999999999999999996
No 310
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.08 E-value=8e-09 Score=102.39 Aligned_cols=235 Identities=15% Similarity=0.135 Sum_probs=142.4
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC------CCCCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDS-GLESDHILVGCGADELI 159 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~------~Yp~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~i 159 (334)
..+++.+||+..+ ...++ ..|++.+++++ +.... .++.....+|.+.|.+.+ +.+.+.++++++++++.
T Consensus 85 D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~ 164 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAN 164 (504)
T ss_pred ECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHH
Confidence 4467789998775 33444 46888888775 32211 112222456666666664 33345799999999999
Q ss_pred HHHHHHhc-------CCC-CEEEEcCCCChhHHHHH-HHCCCe------------EEEeeCCCCCC-------------C
Q 019868 160 DLIMRCVL-------DPG-DKIVDCPPTFTMYEFDA-AVNGAA------------VVKVPRKSDFS-------------L 205 (334)
Q Consensus 160 ~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~-~~~G~~------------v~~v~~~~~~~-------------~ 205 (334)
..+++... .++ .+|+..+-.|......+ ...|.. +..++.+..+. .
T Consensus 165 e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 165 DTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 99998552 122 57887777776543322 222221 11222111111 0
Q ss_pred CHHHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEE
Q 019868 206 NVELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIV 277 (334)
Q Consensus 206 d~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~ 277 (334)
..+++++.+. .+++.+|++.......|.+.+ .+++++|++. ++++|+||++.+|...+.... ...++-..-
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv~PD 323 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNIKPD 323 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCCCCc
Confidence 1234555553 134567776655666788877 6777777877 999999999988753332221 111111111
Q ss_pred EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~ 327 (334)
+.+|+|.+| .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+
T Consensus 324 ivtlgK~lg-gG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le 382 (504)
T PLN02760 324 LVSLAKALS-SAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALK 382 (504)
T ss_pred EEEeccccc-CCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHH
Confidence 456899887 45 5899999999999877531 2236788999888888775
No 311
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.08 E-value=1.1e-08 Score=103.82 Aligned_cols=165 Identities=12% Similarity=0.100 Sum_probs=121.6
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~-- 203 (334)
|..-..+..+..|+.+|.+ .-.++++|++.++..++.+++.+||+|++...+|-+..+...+.|+++++++.. +.+
T Consensus 193 ~~G~i~eAe~~aA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~Gi 271 (713)
T PRK15399 193 HTGPHLEAEEYIARTFGAE-QSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALGI 271 (713)
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccCC
Confidence 4444678999999999975 467889999999999999999999999999999998888888899999998732 222
Q ss_pred --CCCH-----HHHHHhccc----CCceEEEEeCCCCccccCCcHHHHHHHHhCCCeE-EEccCCcCcc-CCC-----Cc
Q 019868 204 --SLNV-----ELIADAVER----EKPKCIFLTSPNNPDGSIINDEDLLKILEMPILV-VLDEAYTEFS-GLE-----SR 265 (334)
Q Consensus 204 --~~d~-----~~l~~~l~~----~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~l-IvDeay~~~~-~~~-----~~ 265 (334)
+++. +.+++++++ .++++++|++|+ -.|.+++.+++.+++ ++.+ ++||||..+. +.+ +.
T Consensus 272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pT-YdGi~yd~~~I~~~~--g~~~ilvDEAhgah~~F~p~~~~~sa 348 (713)
T PRK15399 272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNST-YDGLLYNTDWIKQTL--DVPSIHFDSAWVPYTHFHPIYQGKSG 348 (713)
T ss_pred cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCC-CCceeeCHHHHHHHh--CCCEEEEeccchhhhhcCcccCCcCh
Confidence 3444 888888753 234689999995 499999999998888 4555 6999997543 222 11
Q ss_pred hhhh-cCCCcEEEEcCCchhhcccccchh-eeEc
Q 019868 266 MEWV-KKHDNLIVLRTFSKRAGLAGLRVG-YGAF 297 (334)
Q Consensus 266 ~~~~-~~~~~~i~i~S~SK~~gl~G~R~G-~l~~ 297 (334)
+... .....++++.|.+|.+ +|+.=+ ++.+
T Consensus 349 m~~~~~aD~~i~~tQStHKtL--~alTQaS~iHv 380 (713)
T PRK15399 349 MSGERVPGKVIFETQSTHKML--AAFSQASLIHI 380 (713)
T ss_pred hhCCCCCCeeeeeeeehhccc--cccchheeeee
Confidence 1111 1123356699999985 565544 4444
No 312
>PLN02263 serine decarboxylase
Probab=99.07 E-value=6.4e-09 Score=101.12 Aligned_cols=172 Identities=15% Similarity=-0.012 Sum_probs=126.8
Q ss_pred HHHHHHHHhcCCCCC--CEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHH
Q 019868 133 RLRAALAKDSGLESD--HILVGCGADELIDLIMRCVLD--PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVE 208 (334)
Q Consensus 133 ~lr~~lA~~~~~~~~--~I~~t~G~~~~i~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~ 208 (334)
++-+.++++++.+++ .=.+|+|+++++-..+.+-.+ +...|++++-+|.++...++.+|++++.||.++++.+|++
T Consensus 137 ~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~g~mD~~ 216 (470)
T PLN02263 137 GVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTLVSGEIDCA 216 (470)
T ss_pred HHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccCCCCcCcHH
Confidence 455556666788654 367899999998887765432 3457889999999999999999999999998888999999
Q ss_pred HHHHhcccCC--ceEEEEeCCCCccccCCcHHHHHHHHhC-CC-----eEEEccCCcCccCC-CCchhhhc-CCCcEEEE
Q 019868 209 LIADAVEREK--PKCIFLTSPNNPDGSIINDEDLLKILEM-PI-----LVVLDEAYTEFSGL-ESRMEWVK-KHDNLIVL 278 (334)
Q Consensus 209 ~l~~~l~~~~--~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~-----~lIvDeay~~~~~~-~~~~~~~~-~~~~~i~i 278 (334)
+|++++.+.. +-+|+.+-..-++|.+=|.+++.++++. ++ |+.+|.+|+++.-. ......++ ...-.=+.
T Consensus 217 aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~~~vDSIs 296 (470)
T PLN02263 217 DFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFKKPIGSVS 296 (470)
T ss_pred HHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCCcCccEEE
Confidence 9999886433 4456667788999999999999999986 65 99999999876520 00011111 11133456
Q ss_pred cCCchhhcccccchheeEcCHHHHHHH
Q 019868 279 RTFSKRAGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l 305 (334)
-+.+|. +..-..+|.++...+.++.+
T Consensus 297 vD~HK~-l~~P~~cgvll~R~~~~~~~ 322 (470)
T PLN02263 297 VSGHKF-VGCPMPCGVQITRMEHINVL 322 (470)
T ss_pred ECCccc-cCCCcCEEEEEEehhhHhhh
Confidence 678995 45678889998876655433
No 313
>PRK07046 aminotransferase; Validated
Probab=99.07 E-value=2e-08 Score=98.36 Aligned_cols=225 Identities=16% Similarity=0.166 Sum_probs=143.9
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..++..+||+..+. ..++ ..|.+.+++++ +... ..++.+...+|.+.|.+..+ .+.+.++++++++...+++
T Consensus 71 D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~~lAe~l~~~~~--~~~v~F~nSGtEA~e~Alr 148 (453)
T PRK07046 71 DVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAAWVGEELARRFG--LPYWQVATTATDANRFVLR 148 (453)
T ss_pred eCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhC--CCEEEEECCHHHHHHHHHH
Confidence 44677889986653 3344 45888888775 3322 33355455678888888775 5789999999999999988
Q ss_pred Hhc--CCCCEEEEcCCCChhHHHHH--HH-CC----------C------eEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868 165 CVL--DPGDKIVDCPPTFTMYEFDA--AV-NG----------A------AVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (334)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~~--~~-~G----------~------~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~ 223 (334)
.-. ...++|+...-+|..+.... .. .| . .+..++ | -|++.+++.+...+..+|+
T Consensus 149 lAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~-nd~~~l~~~l~~~~vAavi 223 (453)
T PRK07046 149 WARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE----F-NDLAALEAALADGDVAAVL 223 (453)
T ss_pred HHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC----C-CCHHHHHHHhCCCCeEEEE
Confidence 432 23467887777776552211 10 11 0 011111 1 1789999988645667777
Q ss_pred EeCCCCccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCC-CCchhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868 224 LTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (334)
Q Consensus 224 l~~p~NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~ 297 (334)
+.-.....|.+.+. ++++++++. ++++|+||+.. |... +......+- ..+++ +|+|.+| .|+.+|.+++
T Consensus 224 ~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv-~PDi~--t~gK~lg-gG~Pi~av~g 298 (453)
T PRK07046 224 AEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGL-EPDFL--VVGKPIA-GGVPCAVYGF 298 (453)
T ss_pred ECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCC-Cccce--eehhhhc-CCCcceeeee
Confidence 76434445666653 666667776 99999999986 3211 111111111 22343 4899998 7899999999
Q ss_pred CHHHHHHHHHh-----------cCCCCCcHHHHHHHHHHhc
Q 019868 298 PLSIIEYLWRA-----------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 298 ~~~~i~~l~~~-----------~~~~~~~~~~q~aa~~~L~ 327 (334)
++++.+.+... ...|+.++++.+++.+.|+
T Consensus 299 ~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~ 339 (453)
T PRK07046 299 SAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLA 339 (453)
T ss_pred hHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHH
Confidence 99999887631 1246778888888888765
No 314
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.07 E-value=9.3e-09 Score=101.14 Aligned_cols=227 Identities=19% Similarity=0.159 Sum_probs=141.2
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCCCC--CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIY--PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Y--p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..+++.+||+..+. ..++ .+|++.+++.+ +.....| +.....+|-+.|.+.++- .+.+.++++++++...+++
T Consensus 95 D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~Alk 173 (474)
T PLN02482 95 DVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLR 173 (474)
T ss_pred ECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHH
Confidence 34577889986653 2333 45888888775 3332223 333345677777776642 4799999999999999988
Q ss_pred Hhc--CCCCEEEEcCCCChhHHHH--HHH-CCC-----------------eEEEeeCCCCCCCCHHHHHHhccc--CCce
Q 019868 165 CVL--DPGDKIVDCPPTFTMYEFD--AAV-NGA-----------------AVVKVPRKSDFSLNVELIADAVER--EKPK 220 (334)
Q Consensus 165 ~l~--~~gd~Vl~~~p~y~~~~~~--~~~-~G~-----------------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~ 220 (334)
.-. ...++|+...-+|..+... +.. .|. .++.+|. -|++.+++.++. .++.
T Consensus 174 lAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~~~~~iA 248 (474)
T PLN02482 174 LARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-----NDLEAVKKLFEANKGEIA 248 (474)
T ss_pred HHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-----CChHHHHHHHHhCCCceE
Confidence 432 2236788777777654321 111 010 0111111 167888887753 3456
Q ss_pred EEEEeCCCCccccCCcH-H---HHHHHHhC-CCeEEEccCCcCccCCCCch-hhhcCCCcEEEEcCCchhhcccccchhe
Q 019868 221 CIFLTSPNNPDGSIIND-E---DLLKILEM-PILVVLDEAYTEFSGLESRM-EWVKKHDNLIVLRTFSKRAGLAGLRVGY 294 (334)
Q Consensus 221 ~i~l~~p~NPtG~~~~~-~---~l~~l~~~-~~~lIvDeay~~~~~~~~~~-~~~~~~~~~i~i~S~SK~~gl~G~R~G~ 294 (334)
+|++.......|.+.+. + .++++++. ++++|+||++.+|....... ...+- ..++ .+|+|.+| .|+.+|.
T Consensus 249 avI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv-~PDi--~t~gK~lg-gG~Piga 324 (474)
T PLN02482 249 AVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGI-TPDL--TTLGKVIG-GGLPVGA 324 (474)
T ss_pred EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCC-CCCE--EEecchhh-CCCceEE
Confidence 66666555667877764 3 45666665 99999999998773221111 11111 1223 36899998 7899999
Q ss_pred eEcCHHHHHHHHHhc-----CCCCCcHHHHHHHHHHhc
Q 019868 295 GAFPLSIIEYLWRAK-----QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 295 l~~~~~~i~~l~~~~-----~~~~~~~~~q~aa~~~L~ 327 (334)
+++++++.+.+.... ..|+.++++.+++.+.|+
T Consensus 325 v~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~ 362 (474)
T PLN02482 325 YGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (474)
T ss_pred EEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHH
Confidence 999999998875321 235678888887777664
No 315
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.06 E-value=1e-08 Score=104.08 Aligned_cols=161 Identities=12% Similarity=0.120 Sum_probs=121.4
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CCC--
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SDF-- 203 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~~-- 203 (334)
|..-..+..+..|+.+|.+ .-.++++|++.++..++.+++.+||+|++...+|-+......+.|+++++++.. +.+
T Consensus 193 ~~G~i~eAe~~AA~~fgAd-~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~Gi 271 (714)
T PRK15400 193 HSGPHKEAEEYIARVFNAD-RSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYGI 271 (714)
T ss_pred CChHHHHHHHHHHHHhCCC-cEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccCC
Confidence 4444678999999999976 467889999999999999999999999999999998888888899999998732 222
Q ss_pred --CCC-----HHHHHHhcccC-C---ceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCcc-CCC-----Cch
Q 019868 204 --SLN-----VELIADAVERE-K---PKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFS-GLE-----SRM 266 (334)
Q Consensus 204 --~~d-----~~~l~~~l~~~-~---~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~-~~~-----~~~ 266 (334)
.++ .+.+++++++. + ++.++|++|+ -.|.+++.+++.++++... +++||||..+. +.+ +.+
T Consensus 272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~-ilvDEAwgah~~F~p~~~~~sam 349 (714)
T PRK15400 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST-YDGLLYNTDFIKKTLDVKS-IHFDSAWVPYTNFSPIYEGKCGM 349 (714)
T ss_pred ccCCCccccCHHHHHHHHHhCccccCccEEEEECCC-CccEecCHHHHHHHhCCCC-EEEEccchhhhccCcccCCcChh
Confidence 234 78888888632 2 3378889995 4999999999999997632 78999997643 222 111
Q ss_pred hhh-cCCCcEEEEcCCchhhcccccch
Q 019868 267 EWV-KKHDNLIVLRTFSKRAGLAGLRV 292 (334)
Q Consensus 267 ~~~-~~~~~~i~i~S~SK~~gl~G~R~ 292 (334)
... ...+.++++.|.+|.+ +|+.=
T Consensus 350 ~~ga~~~~~i~vtQStHKtL--~alTQ 374 (714)
T PRK15400 350 SGGRVEGKVIYETQSTHKLL--AAFSQ 374 (714)
T ss_pred hcCCCCCCceEEEEchhhcc--cchhH
Confidence 111 1124569999999985 45543
No 316
>PRK06062 hypothetical protein; Provisional
Probab=99.05 E-value=1.5e-08 Score=99.36 Aligned_cols=233 Identities=15% Similarity=0.136 Sum_probs=144.9
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..+++.+||+..+. ..++ ..|++.+++.+ +... ..|..+...+|-+.|++...-..+.|+++++++++...+
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~A 128 (451)
T PRK06062 49 DYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSKVFFTNGGADANEHA 128 (451)
T ss_pred ECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHH
Confidence 45678899987663 3344 45788888765 2211 233444456777777777653346899999999999999
Q ss_pred HHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-----------eEEEeeCCCCCC------CC-------HHHHHHhcc
Q 019868 163 MRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-----------AVVKVPRKSDFS------LN-------VELIADAVE 215 (334)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-----------~v~~v~~~~~~~------~d-------~~~l~~~l~ 215 (334)
++.-. ....+|+...-.|......+.. .|. .+..++....+. -| ++.+++.++
T Consensus 129 lklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~ 208 (451)
T PRK06062 129 VRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIE 208 (451)
T ss_pred HHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHH
Confidence 88432 2236788777777654433222 111 112222111111 12 566777774
Q ss_pred c---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhh
Q 019868 216 R---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRA 285 (334)
Q Consensus 216 ~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~ 285 (334)
. .++.+|++.......|.+.+ .++++++++. |+++|+||++..|...+... ...+- ..+ +-+|+|.+
T Consensus 209 ~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PD--i~t~gK~l 285 (451)
T PRK06062 209 LEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPD--LITFAKGV 285 (451)
T ss_pred hcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCC--eeeechhh
Confidence 2 34567777655566788876 5666667776 99999999999875333221 11111 122 33689998
Q ss_pred cccc-cchheeEcCHHHHHHHHHh----cCCCCCcHHHHHHHHHHhc
Q 019868 286 GLAG-LRVGYGAFPLSIIEYLWRA----KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 286 gl~G-~R~G~l~~~~~~i~~l~~~----~~~~~~~~~~q~aa~~~L~ 327 (334)
| .| +.+|.+++.+++.+.+... ...|+.++++.+++.+.|+
T Consensus 286 g-gG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 331 (451)
T PRK06062 286 N-SGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATIN 331 (451)
T ss_pred h-cCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 7 67 4899999999998877532 1236778888888888775
No 317
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.05 E-value=1.3e-08 Score=99.58 Aligned_cols=168 Identities=18% Similarity=0.195 Sum_probs=130.8
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCC----
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD---- 202 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~---- 202 (334)
|..-..+..+..|+.+|.+. ..++++|++.++..++.+++.+||.|+++.++|.+.....-..|+.++++....+
T Consensus 68 p~G~i~eAqe~aA~~fgAd~-tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 68 PEGPIKEAQELAARVFGADH-TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred CCccHHHHHHHHHHHhCCCc-eEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccc
Confidence 44447899999999999754 5788899999999999999999999999999999888887889999999873222
Q ss_pred --CCCCHHHHHHhccc-CCc-eEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-CCchhhhcCCCcEE
Q 019868 203 --FSLNVELIADAVER-EKP-KCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL-ESRMEWVKKHDNLI 276 (334)
Q Consensus 203 --~~~d~~~l~~~l~~-~~~-~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~-~~~~~~~~~~~~~i 276 (334)
.+++.+.+.+++.+ +.. |++++++|.. .|.+++.+++.+.+.. +.|+.+||++...... +...........++
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 46889999887653 344 7889888876 8999999999999876 9999999988544321 22222222367789
Q ss_pred EEcCCchhhcccccchh-eeEcC
Q 019868 277 VLRTFSKRAGLAGLRVG-YGAFP 298 (334)
Q Consensus 277 ~i~S~SK~~gl~G~R~G-~l~~~ 298 (334)
++.|..|..+ ++.-+ ++.+.
T Consensus 226 ~tqS~HK~l~--alSQaS~iHv~ 246 (557)
T COG1982 226 VTQSTHKLLA--ALSQASMIHVK 246 (557)
T ss_pred EEechhhhhh--hhhhhHHHhhC
Confidence 9999999864 55544 45454
No 318
>PRK06105 aminotransferase; Provisional
Probab=99.03 E-value=1.4e-08 Score=99.70 Aligned_cols=233 Identities=13% Similarity=0.090 Sum_probs=140.6
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC---C---CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+. ..++ .+|++.+++.+ +... . .|+.....+|-+.|++..+-+-+.++++++++++..
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve 123 (460)
T PRK06105 44 DDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPMSKVFFTNSGSEAND 123 (460)
T ss_pred ECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHH
Confidence 44678899997663 3444 46888888775 3221 1 233333456777887777544468999999999999
Q ss_pred HHHHHhc------C-CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCC-------------C
Q 019868 161 LIMRCVL------D-PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-------------N 206 (334)
Q Consensus 161 ~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~-------------d 206 (334)
.+++... . +| .+|+...-.|......+.. .|. .+..++..+.+.. .
T Consensus 124 ~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06105 124 TVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRL 203 (460)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHH
Confidence 9998532 1 22 5777777777644322211 111 1122221111111 1
Q ss_pred HHHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868 207 VELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (334)
Q Consensus 207 ~~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i 276 (334)
++++++.+. ..++.+|++.-...-.|...+ .++++++++. ++++|+||++..|...+.... ..+- ..++
T Consensus 204 ~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi 282 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDI 282 (460)
T ss_pred HHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCe
Confidence 355666653 235667777655666677765 4555556655 999999999987753332211 1111 1223
Q ss_pred EEcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 277 ~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~ 327 (334)
-+++|.++ .| +.+|.+++++++.+.+... ...++.|+++.+++.+.|+
T Consensus 283 --~~~gK~lg-gG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~ 340 (460)
T PRK06105 283 --LVMSKQLS-SSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLA 340 (460)
T ss_pred --eeeecccc-cCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHH
Confidence 36899987 45 5899999999998877532 2346788888888777664
No 319
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.02 E-value=1.2e-08 Score=99.07 Aligned_cols=233 Identities=16% Similarity=0.207 Sum_probs=135.2
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC-CCC----CCCcChHHHHHHHHHhcCCC--C-CCEEE-eCCHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PYI----YPDPESRRLRAALAKDSGLE--S-DHILV-GCGADE 157 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~~~----Yp~~g~~~lr~~lA~~~~~~--~-~~I~~-t~G~~~ 157 (334)
..+++.+||+..+. ..++ .+|++.+++++ +.. .+. +......+|-+.|++..... . +.+++ ++++++
T Consensus 31 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 110 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTN 110 (412)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchH
Confidence 44677899987663 3344 56888888876 321 111 11222345666666653211 1 24666 478889
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCC---CCHHHHHHhccc---
Q 019868 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS---LNVELIADAVER--- 216 (334)
Q Consensus 158 ~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~---~d~~~l~~~l~~--- 216 (334)
+...+++... ....+|+...-+|......+.. .| ..+..+|..+-.. -+++.+++.+.+
T Consensus 111 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~ 190 (412)
T TIGR02407 111 AVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSS 190 (412)
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccC
Confidence 9999888432 2336788888777655433222 11 1223333211000 236677777752
Q ss_pred --CCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhccc
Q 019868 217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 217 --~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~ 288 (334)
+++.+|++....++.|. ..+.+.+++|.+. ++++|+||++.+|...+.....- ..-...++ +++|.++-.
T Consensus 191 ~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~--~~~K~lg~~ 268 (412)
T TIGR02407 191 GVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIV--CLSKSISGY 268 (412)
T ss_pred CCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEE--EechhccCC
Confidence 24567777666788898 5678777777654 99999999998775322221110 01111233 589999833
Q ss_pred ccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHh
Q 019868 289 GLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAAL 326 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L 326 (334)
|+|+|++++++++ +.+... ...|+.++++.+++.++|
T Consensus 269 G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l 307 (412)
T TIGR02407 269 GLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAAL 307 (412)
T ss_pred ccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHH
Confidence 9999999998875 544322 223667777555544444
No 320
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.01 E-value=1.1e-08 Score=99.55 Aligned_cols=232 Identities=16% Similarity=0.200 Sum_probs=136.2
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC-CC----CCCCcChHHHHHHHHHhcCCC--CC-CEEE-eCCHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLE--SD-HILV-GCGADE 157 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~-~~----~Yp~~g~~~lr~~lA~~~~~~--~~-~I~~-t~G~~~ 157 (334)
..+++.+||+..|. ..++ .+|++.+++++ +.. .+ .++.....+|-+.+++.+... .+ .+++ ++++++
T Consensus 35 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGse 114 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTN 114 (425)
T ss_pred eCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHH
Confidence 44678899986663 3344 46888888865 321 11 122333456667777654211 22 5656 579999
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHHC-C---------C---eEEEeeCCCCC---CCCHHHHHHhccc---
Q 019868 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAVN-G---------A---AVVKVPRKSDF---SLNVELIADAVER--- 216 (334)
Q Consensus 158 ~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-G---------~---~v~~v~~~~~~---~~d~~~l~~~l~~--- 216 (334)
+...+++... ....+|+...-+|......+... | . .+..+|....+ .-|++.+++.+++
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~ 194 (425)
T PRK09264 115 AVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSS 194 (425)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccC
Confidence 9999888432 22367887777776544322211 1 0 23334422110 0267778887752
Q ss_pred --CCceEEEEeCCCCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcc
Q 019868 217 --EKPKCIFLTSPNNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGL 287 (334)
Q Consensus 217 --~~~~~i~l~~p~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl 287 (334)
+++.+|++.-.....|. +++.+.+++|.+. ++++|+||++.+|...+.... ..+-.+. + .+|+|.++.
T Consensus 195 ~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PD-i--~t~~K~l~~ 271 (425)
T PRK09264 195 GVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPD-I--VTLSKSISG 271 (425)
T ss_pred CCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCC-E--EEeccccCC
Confidence 23557776655555676 4566666666554 999999999987754332211 1111122 2 367999985
Q ss_pred cccchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHh
Q 019868 288 AGLRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAAL 326 (334)
Q Consensus 288 ~G~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L 326 (334)
.|+++|++++++++ ..+... ...++.++++..++.++|
T Consensus 272 ~G~pigav~~~~~i-~~~~~~~~~~T~~gnp~~~aaa~a~l 311 (425)
T PRK09264 272 YGLPMALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAAL 311 (425)
T ss_pred CccceEEEEEchhh-hccCCCccCCCCCCCHHHHHHHHHHH
Confidence 59999999999886 333221 123667777777766666
No 321
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.01 E-value=2.5e-08 Score=89.92 Aligned_cols=199 Identities=16% Similarity=0.155 Sum_probs=145.9
Q ss_pred CCCCCHHHHHHHhcCcCCCCCCCc--ChHHHHHHHHHhcCCCCC-CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CCh
Q 019868 106 PYGPPPEVREALGQLKFPYIYPDP--ESRRLRAALAKDSGLESD-HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFT 181 (334)
Q Consensus 106 ~~~~~~~v~~al~~~~~~~~Yp~~--g~~~lr~~lA~~~~~~~~-~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y~ 181 (334)
|-..++.+.+|+..-..++.-|+. -..++++-+...+..... -.++...++.+.+.++-.++.|||+|++... .|.
T Consensus 25 Psnl~~~V~~A~~~~~lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg 104 (385)
T KOG2862|consen 25 PSNLSGRVQEAMSRPSLGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWG 104 (385)
T ss_pred CcCCCHHHHHhhcCCccccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHH
Confidence 444567888888764333333443 145666666666654333 3455555667888898889999999987654 554
Q ss_pred -hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc-HHHHHHHHhC-CCeEEEccCCcC
Q 019868 182 -MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTE 258 (334)
Q Consensus 182 -~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~-~~~lIvDeay~~ 258 (334)
-+...++.+|++|..++.+.+....++.+.+++.+.++++|++++-...||...+ .+.+.++++. +.++++|.+-+-
T Consensus 105 ~ra~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSl 184 (385)
T KOG2862|consen 105 QRAADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASL 184 (385)
T ss_pred HHHHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhc
Confidence 3567788899999999877778899999999999899999999999999999999 7778888887 999999998764
Q ss_pred ccCCCCchhhhcCCCcEEEEcCCchhhccc-ccchheeEcCHHHHHHHHHhcC
Q 019868 259 FSGLESRMEWVKKHDNLIVLRTFSKRAGLA-GLRVGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 259 ~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~-G~R~G~l~~~~~~i~~l~~~~~ 310 (334)
... .-..++++-++....--|.+|.| | ++-+...+...++++..++
T Consensus 185 ggt----~F~mDewgVDvaytgSQKaL~aP~G--LsiisfS~ka~~~~~~rK~ 231 (385)
T KOG2862|consen 185 GGT----EFEMDEWGVDVAYTGSQKALGAPAG--LSIISFSDKALEAIRDRKT 231 (385)
T ss_pred CCc----cceehhhcccEEEecchhhcCCCCC--cceeecCHHHHHHHhhccC
Confidence 321 11123455567777788999765 5 4557778888888776554
No 322
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.00 E-value=2.9e-08 Score=97.03 Aligned_cols=233 Identities=18% Similarity=0.217 Sum_probs=142.6
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CC--CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PY--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~--~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+. ..++ ..|++.+++++ +.. .. .++.+...+|.+.|++...-..+.+++++++++++..
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~ 121 (442)
T PRK13360 42 THDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDT 121 (442)
T ss_pred eCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34577889987663 3344 45888888765 321 11 2233334567777777764334689999999999999
Q ss_pred HHHHhcC-------C-CCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCC-----CCC--------CH
Q 019868 162 IMRCVLD-------P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSD-----FSL--------NV 207 (334)
Q Consensus 162 ~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~-----~~~--------d~ 207 (334)
+++.... + ..+|+...-.|......+.. .| ..+..+|...+ +.. .+
T Consensus 122 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 201 (442)
T PRK13360 122 ALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELA 201 (442)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHH
Confidence 9884321 2 25788888888654332211 11 11222332110 111 14
Q ss_pred HHHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV 277 (334)
Q Consensus 208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~ 277 (334)
+.+++.+.. .++.+|++.......|...+ .++++++++. ++++|+||++..|...+.... ..+- ..+++
T Consensus 202 ~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv 280 (442)
T PRK13360 202 DELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLL 280 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCcee
Confidence 566666642 34556776666667788877 6777777776 999999999987743222211 1111 12233
Q ss_pred EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~ 327 (334)
+|+|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.++|+
T Consensus 281 --t~gK~l~-gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~ 337 (442)
T PRK13360 281 --TCAKGLT-NGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLD 337 (442)
T ss_pred --eeeeccc-cCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 7899886 45 6889999999998876431 1236678888888887764
No 323
>PRK06149 hypothetical protein; Provisional
Probab=98.99 E-value=2.4e-08 Score=106.40 Aligned_cols=234 Identities=15% Similarity=0.099 Sum_probs=142.0
Q ss_pred CCCCCCeeecCCCCCCCC-CCHHHHHHHhc-Cc---CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
..+++.++|+..|...++ ..|++.+++.+ +. ...+|..+...+|.+.|++.+.-..+.++++++++++...+++.
T Consensus 581 D~dG~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~Alkl 660 (972)
T PRK06149 581 DMAGRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRL 660 (972)
T ss_pred eCCCCEEEECCCCccccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHH
Confidence 345778999987765666 67888888765 22 22223333456788888888753346899999999999999883
Q ss_pred hc--CCCCEEEEcCCCChhHHHHHH-HCC-----C--------eEEEeeCCCC----CC-CC-----HHHHHHhcc----
Q 019868 166 VL--DPGDKIVDCPPTFTMYEFDAA-VNG-----A--------AVVKVPRKSD----FS-LN-----VELIADAVE---- 215 (334)
Q Consensus 166 l~--~~gd~Vl~~~p~y~~~~~~~~-~~G-----~--------~v~~v~~~~~----~~-~d-----~~~l~~~l~---- 215 (334)
-. ....+|+..+-.|......+. ..+ . .+..++..+. |. .| .+++++.++
T Consensus 661 Ar~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 661 AWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred HHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 21 223567777766764332211 100 0 1222321111 11 11 233333332
Q ss_pred -cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCC--CcEEEEcCCchhhcc
Q 019868 216 -REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKH--DNLIVLRTFSKRAGL 287 (334)
Q Consensus 216 -~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~--~~~i~i~S~SK~~gl 287 (334)
..++.+|++.......|.+.+ .+++.++++. |+++|+||++.+|...+......... ...++ +++|.+|
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg- 817 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMG- 817 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--Eeccccc-
Confidence 134556666544555677666 5566666666 99999999998775433321111111 12233 7899998
Q ss_pred cccchheeEcCHHHHHHHHHh---cCCCCCcHHHHHHHHHHhc
Q 019868 288 AGLRVGYGAFPLSIIEYLWRA---KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 288 ~G~R~G~l~~~~~~i~~l~~~---~~~~~~~~~~q~aa~~~L~ 327 (334)
.|..+|.+++.+++.+.+... ...++.|+++.+++.+.|+
T Consensus 818 ~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~ 860 (972)
T PRK06149 818 NGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLD 860 (972)
T ss_pred CCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHH
Confidence 789999999999998877531 2235678888888888775
No 324
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.98 E-value=2.4e-08 Score=95.17 Aligned_cols=184 Identities=13% Similarity=0.046 Sum_probs=123.2
Q ss_pred CCCCCHHHHHHHhcCc-----CCCCCCCc--ChHHHHHHHHHhcCCCC-CCEEEe-CCHHHHHHHHHHHhcCCCCEEEEc
Q 019868 106 PYGPPPEVREALGQLK-----FPYIYPDP--ESRRLRAALAKDSGLES-DHILVG-CGADELIDLIMRCVLDPGDKIVDC 176 (334)
Q Consensus 106 ~~~~~~~v~~al~~~~-----~~~~Yp~~--g~~~lr~~lA~~~~~~~-~~I~~t-~G~~~~i~~~~~~l~~~gd~Vl~~ 176 (334)
|...++++.+++.... ..++-+.. -..+.|+.++++++++. .+|+++ .++|.+++.++..++.+ +.+++.
T Consensus 11 P~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~ 89 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLS 89 (361)
T ss_pred CcCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEe
Confidence 4556788999986421 11222332 26789999999999854 478886 55999999999988743 344444
Q ss_pred CCCCh-hHHHHHHH--CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEE
Q 019868 177 PPTFT-MYEFDAAV--NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVL 252 (334)
Q Consensus 177 ~p~y~-~~~~~~~~--~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIv 252 (334)
.-.|. .+...+.. .+.++..++.+.+..++. .+. +++++|.+++-.|.||...|.+++ ++. ++++|+
T Consensus 90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iV 160 (361)
T TIGR01366 90 FGEFSSKFAKAVKLAPWLGEPIIVTADPGSAPEP-----QAD-PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVI 160 (361)
T ss_pred cCHHHHHHHHHHHhhhccCCceEEecCCCCCCCC-----ccC-CCCCEEEEcccCCccceecccccc---cccCCCeEEE
Confidence 45564 34445554 233566665433333332 233 689999999999999999998876 454 999999
Q ss_pred ccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 253 DEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 253 Deay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
|.+.+-....-. .. . -.+++.|..|.+|.+| .+++++++++.++++.
T Consensus 161 Davqs~g~~~id-v~---~--~D~~~~s~~K~lg~~~-Gl~~~~~s~~~~~~~~ 207 (361)
T TIGR01366 161 DATSGAGGLPVD-IA---E--TDVYYFAPQKNFASDG-GLWLAIMSPAALERIE 207 (361)
T ss_pred EcCccccCCCCC-HH---H--CCEEEEEchhhcCCCC-ceEEEEECHHHHhhhh
Confidence 999874332111 11 1 3489999999998774 2555667888876655
No 325
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.96 E-value=4.9e-08 Score=102.91 Aligned_cols=168 Identities=15% Similarity=0.081 Sum_probs=119.4
Q ss_pred HHHHHHHHHhcCCCCCCEEEeC-CHHHHHHH---HHHHh-cCCCC----EEEEcCCCChhHHHHHHHCCCeEEEeeCCCC
Q 019868 132 RRLRAALAKDSGLESDHILVGC-GADELIDL---IMRCV-LDPGD----KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSD 202 (334)
Q Consensus 132 ~~lr~~lA~~~~~~~~~I~~t~-G~~~~i~~---~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~ 202 (334)
.++.+.+++++|.+ ++.+.. |++++... +++.+ ..+|+ +|++++..|+.....+...|++++.++.+.+
T Consensus 545 ~e~q~~l~eltG~d--~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~ 622 (954)
T PRK05367 545 DQLEAWLAEITGYD--AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN 622 (954)
T ss_pred HHHHHHHHHHHCCC--CEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC
Confidence 46778888888975 565655 44443322 23322 24565 6999999998888888899999999997777
Q ss_pred CCCCHHHHHHhcccC--CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 203 FSLNVELIADAVERE--KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
+.+|+++|++++++. ++.+|++++|++-.+...+.+++.++++. ++++++|.++......-. .....+-++++.
T Consensus 623 G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~---~pg~~GADi~~~ 699 (954)
T PRK05367 623 GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLA---RPGDIGADVSHL 699 (954)
T ss_pred CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCC---ChhhcCCCEEEe
Confidence 899999999999642 56788888998764445789999999987 999999999953211101 112334568999
Q ss_pred CCchhhcc----cccchheeEcCHHHHHH
Q 019868 280 TFSKRAGL----AGLRVGYGAFPLSIIEY 304 (334)
Q Consensus 280 S~SK~~gl----~G~R~G~l~~~~~~i~~ 304 (334)
+..|.|+. .|-.+|++.+.+.+...
T Consensus 700 s~HK~f~~P~G~GGPg~G~l~vr~~l~p~ 728 (954)
T PRK05367 700 NLHKTFCIPHGGGGPGVGPIGVKAHLAPF 728 (954)
T ss_pred cCcccCCCCcCCCCCceEEEeeccccccc
Confidence 99998753 35557888876554433
No 326
>PRK07678 aminotransferase; Validated
Probab=98.94 E-value=4.7e-08 Score=95.85 Aligned_cols=232 Identities=16% Similarity=0.136 Sum_probs=140.8
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
..++..+||+..+. ..++ ..|++.+++.+ +... ..|+.....+|.+.|++.++. .+.++++++++++...+
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~~v~f~~sGseA~e~A 121 (451)
T PRK07678 43 DIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGG-EYVIFFSNSGSEANETA 121 (451)
T ss_pred eCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCC-CCEEEEeCCcHHHHHHH
Confidence 34677889987653 3344 45788887765 3211 223444456788888887754 35899999999999998
Q ss_pred HHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCC---------C---HHH
Q 019868 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL---------N---VEL 209 (334)
Q Consensus 163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~---------d---~~~ 209 (334)
++.-.. +| .+|+...-.|......+.. .|. .+..++..+.+.. | ++.
T Consensus 122 lklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (451)
T PRK07678 122 FKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKE 201 (451)
T ss_pred HHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHH
Confidence 884321 23 5788877777654433222 111 1222321111111 1 223
Q ss_pred HHHhcc---cCCceEEEEeCCCCccccCCc-H---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEc
Q 019868 210 IADAVE---REKPKCIFLTSPNNPDGSIIN-D---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLR 279 (334)
Q Consensus 210 l~~~l~---~~~~~~i~l~~p~NPtG~~~~-~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~ 279 (334)
+++.++ .+++.+|++.-...-.|.+.+ . ++++++++. ++++|+||++.+|...+.... ..+- ..+++
T Consensus 202 l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDiv-- 278 (451)
T PRK07678 202 IDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDII-- 278 (451)
T ss_pred HHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEE--
Confidence 455553 245677777644444677654 4 444555555 999999999988854332211 1111 12243
Q ss_pred CCchhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868 280 TFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 280 S~SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~ 327 (334)
+++|.+| .| +.+|.+++.+++.+.+.. ....|+.|+++.+++.+.|+
T Consensus 279 t~gK~lg-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~ 334 (451)
T PRK07678 279 TMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLE 334 (451)
T ss_pred Eeecccc-cCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHH
Confidence 5899987 56 689999999999887753 22347788999888888875
No 327
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.94 E-value=5.8e-08 Score=95.01 Aligned_cols=233 Identities=19% Similarity=0.226 Sum_probs=142.7
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+. ..++ ..|++.+++++ +.. . ..|+.+...+|.+.|++..+-..+.|+++++++++...
T Consensus 45 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~ 124 (445)
T PRK09221 45 DADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDT 124 (445)
T ss_pred eCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34677899997662 3344 45888877765 322 1 12333345567777777765334689999999999999
Q ss_pred HHHHhc------C-C-CCEEEEcCCCChhHHHHHHHC-C------------CeEEEeeCCC-----CCCC--------CH
Q 019868 162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-G------------AAVVKVPRKS-----DFSL--------NV 207 (334)
Q Consensus 162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-G------------~~v~~v~~~~-----~~~~--------d~ 207 (334)
+++... . + ..+|+...-.|......+... | ..+..+|... .+.. .+
T Consensus 125 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (445)
T PRK09221 125 ALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELA 204 (445)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHH
Confidence 888432 1 1 257888887776543222111 1 0122222111 0111 13
Q ss_pred HHHHHhccc---CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868 208 ELIADAVER---EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV 277 (334)
Q Consensus 208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~ 277 (334)
+.+++.++. +++.+|++.......|...+ .++++++++. ++++|+||++..|...+.... ..+- ...+
T Consensus 205 ~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi- 282 (445)
T PRK09221 205 DDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDI- 282 (445)
T ss_pred HHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCE-
Confidence 466666642 34667777766677888887 6777778876 999999999987753222211 1111 1123
Q ss_pred EcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~ 327 (334)
-+++|.++ .| +.+|.+++++++.+.+... ...++.++++.+++.+.|+
T Consensus 283 -~~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~ 340 (445)
T PRK09221 283 -ITFAKGLT-NGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLD 340 (445)
T ss_pred -EEeccccc-cCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHH
Confidence 36899886 45 6789999999998876431 1236678888888777764
No 328
>PRK07482 hypothetical protein; Provisional
Probab=98.93 E-value=7.7e-08 Score=94.58 Aligned_cols=233 Identities=15% Similarity=0.109 Sum_probs=141.3
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC------CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~------~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+- ..++ .+|++.+++++ ++... .|+.....+|-+.|++...-+-+.+++++++++++.
T Consensus 46 D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve 125 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANE 125 (461)
T ss_pred ECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHH
Confidence 45678899987763 2333 46888888775 32211 233333456777777766434568999999999999
Q ss_pred HHHHHhc------C-C-CCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCC-------------CC
Q 019868 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS-------------LN 206 (334)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~-------------~d 206 (334)
.+++... . + ..+|+...-.|......+.. .| ..+..++....+. -+
T Consensus 126 ~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (461)
T PRK07482 126 TQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYC 205 (461)
T ss_pred HHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHH
Confidence 9998542 1 2 25788777777654332221 11 0112222111000 03
Q ss_pred HHHHHHhccc---CCceEEEEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868 207 VELIADAVER---EKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (334)
Q Consensus 207 ~~~l~~~l~~---~~~~~i~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i 276 (334)
++.+++.+.. +++.+|++.-...-.|... +.+.+++| ++. ++++|.||++.+|...+.... ..+- ..++
T Consensus 206 ~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDi 284 (461)
T PRK07482 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDL 284 (461)
T ss_pred HHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCE
Confidence 5677776631 3466777764444457664 55555554 444 999999999998854332211 1111 2234
Q ss_pred EEcCCchhhccccc-chheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868 277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 277 ~i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~ 327 (334)
++ ++|.++ .|. .+|.+++.+++.+.+.. ....|+.|+++.+++.+.|+
T Consensus 285 v~--~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 342 (461)
T PRK07482 285 IT--VAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLD 342 (461)
T ss_pred EE--Eccccc-cCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHH
Confidence 44 799886 674 88999999998887652 12246789999988888875
No 329
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.90 E-value=7.6e-08 Score=92.80 Aligned_cols=233 Identities=19% Similarity=0.206 Sum_probs=149.6
Q ss_pred CCCCCCeeecCCCCC--CCC-CCHHHHHHHhc-C---c-CCCCC-CCcChHHHHHHHHHhcCC-CCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANEN--PYG-PPPEVREALGQ-L---K-FPYIY-PDPESRRLRAALAKDSGL-ESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~~-~~~~v~~al~~-~---~-~~~~Y-p~~g~~~lr~~lA~~~~~-~~~~I~~t~G~~~~i~ 160 (334)
..+++.+|||..+.+ .++ .+|.+++|+++ + . ....| +.....++-|.|.+...- ..+.++++++++++.+
T Consensus 52 DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E 131 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVE 131 (447)
T ss_pred eCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHH
Confidence 456788999988544 343 57899998876 2 2 22334 223456777777777765 4678999999999999
Q ss_pred HHHHHhc--CCCCEEEEcCCCChhHHHH-HHHCC-------------CeEEEeeCCCC----CCC--------CHHHHHH
Q 019868 161 LIMRCVL--DPGDKIVDCPPTFTMYEFD-AAVNG-------------AAVVKVPRKSD----FSL--------NVELIAD 212 (334)
Q Consensus 161 ~~~~~l~--~~gd~Vl~~~p~y~~~~~~-~~~~G-------------~~v~~v~~~~~----~~~--------d~~~l~~ 212 (334)
.+++.-. .....|+...-.|...... ....| ..++.+|..+. |.. ..+.+++
T Consensus 132 ~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~ 211 (447)
T COG0160 132 AAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIER 211 (447)
T ss_pred HHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHH
Confidence 9998432 3346777777777533222 22211 12455552211 111 2344454
Q ss_pred hccc-----CCceEEEEeCCCCccccCCcHH-HH---HHHHhC-CCeEEEccCCcCccCCCCchhhhcCC--CcEEEEcC
Q 019868 213 AVER-----EKPKCIFLTSPNNPDGSIINDE-DL---LKILEM-PILVVLDEAYTEFSGLESRMEWVKKH--DNLIVLRT 280 (334)
Q Consensus 213 ~l~~-----~~~~~i~l~~p~NPtG~~~~~~-~l---~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~--~~~i~i~S 280 (334)
.+.. .++.++++.....-.|.+.+.+ .+ +++++. ++++|+||++.+|...+..+.. ... ..+++ +
T Consensus 212 ~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~-E~~gv~PDiv--t 288 (447)
T COG0160 212 ALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAF-EHFGVEPDIV--T 288 (447)
T ss_pred HHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhh-hhcCCCCCEE--E
Confidence 3322 3466888877788888877544 33 344554 9999999999999866643332 221 22344 5
Q ss_pred CchhhcccccchheeEcCHHHHHHHH-HhcCCCCCcHHHHHHHHHHhc
Q 019868 281 FSKRAGLAGLRVGYGAFPLSIIEYLW-RAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 281 ~SK~~gl~G~R~G~l~~~~~~i~~l~-~~~~~~~~~~~~q~aa~~~L~ 327 (334)
++|.+| .|+.+|.++..+++.+..- .....|.-|+++.+++.+.|+
T Consensus 289 ~aK~ig-~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~ 335 (447)
T COG0160 289 LAKSLG-GGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLD 335 (447)
T ss_pred eccccc-CCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHH
Confidence 899998 5999999999999877322 222337889999999999887
No 330
>PRK06148 hypothetical protein; Provisional
Probab=98.89 E-value=6.3e-08 Score=103.44 Aligned_cols=236 Identities=13% Similarity=0.050 Sum_probs=142.3
Q ss_pred CCCCCCeeecCCCCCCCC-CCHHHHHHHhc-Cc---CCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANENPYG-PPPEVREALGQ-LK---FPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRC 165 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~~~~-~~~~v~~al~~-~~---~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~ 165 (334)
..+++.++|+..|...++ ..|++.+++.+ +. ....|..+...+|-+.|++.+.-.-+.++++++++++...+++.
T Consensus 620 D~dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~Alkl 699 (1013)
T PRK06148 620 DNRGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRL 699 (1013)
T ss_pred ECCCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHH
Confidence 346778899977755555 56888888765 32 22345555566788888887753346899999999999999884
Q ss_pred hc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCC----CCCC-C-------HHHHHHhcc---
Q 019868 166 VL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKS----DFSL-N-------VELIADAVE--- 215 (334)
Q Consensus 166 l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~----~~~~-d-------~~~l~~~l~--- 215 (334)
-. ....+|+...-+|......+.. .| ..+..++..+ .|.. | .+.+++.++
T Consensus 700 Ar~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 779 (1013)
T PRK06148 700 ARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA 779 (1013)
T ss_pred HHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence 32 2336788777777644322111 11 0111111110 1111 1 133444432
Q ss_pred --cCCceEEEEeCCCCccccCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc
Q 019868 216 --REKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 216 --~~~~~~i~l~~p~NPtG~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~ 288 (334)
..++.+|++.....--|.+. +.+.+ +++++. |+++|.||++.+|...+.........+-.-=+-+++|.+| .
T Consensus 780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDivt~gK~lg-g 858 (1013)
T PRK06148 780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIG-N 858 (1013)
T ss_pred ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcceeeeccccc-C
Confidence 13466777664444456655 44444 445555 9999999999888643321111111111111235799998 7
Q ss_pred ccchheeEcCHHHHHHHHH---hcCCCCCcHHHHHHHHHHhc
Q 019868 289 GLRVGYGAFPLSIIEYLWR---AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~---~~~~~~~~~~~q~aa~~~L~ 327 (334)
|+.+|.+++.+++.+.+.. ....|+.|+++.+++.+.|+
T Consensus 859 G~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~ 900 (1013)
T PRK06148 859 GHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLD 900 (1013)
T ss_pred CcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHH
Confidence 8999999999999887753 22346788998888888765
No 331
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.89 E-value=1.1e-07 Score=92.57 Aligned_cols=233 Identities=15% Similarity=0.153 Sum_probs=138.4
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+. ..++ .+|++.+++++ +.... .+..+...+|.+.|++..+...+.++++++++++...
T Consensus 39 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~ 118 (428)
T PRK07986 39 LADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEV 118 (428)
T ss_pred eCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 34677889987652 3343 45888888765 32211 1233334567777777765444689999999999999
Q ss_pred HHHHhc-------CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCC-CC-----CCCHHHHHHhc
Q 019868 162 IMRCVL-------DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DF-----SLNVELIADAV 214 (334)
Q Consensus 162 ~~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~-----~~d~~~l~~~l 214 (334)
+++... ....+|+...-+|......+.. .|- .+..++... .+ .-|++++++.+
T Consensus 119 AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l 198 (428)
T PRK07986 119 AMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLM 198 (428)
T ss_pred HHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHH
Confidence 888432 1236788888888653322221 111 112222111 01 12566777777
Q ss_pred cc--CCceEEEEeCC-CCccccCC-cHH---HHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchh
Q 019868 215 ER--EKPKCIFLTSP-NNPDGSII-NDE---DLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKR 284 (334)
Q Consensus 215 ~~--~~~~~i~l~~p-~NPtG~~~-~~~---~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~ 284 (334)
+. ++..+|++... ..-.|... +.+ +++++++. ++++|+||++.+|...+.... ..+- ..+++ +|+|.
T Consensus 199 ~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~--t~gK~ 275 (428)
T PRK07986 199 AAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDIL--CLGKA 275 (428)
T ss_pred HhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEE--Eechh
Confidence 42 24556666542 44445533 444 44555555 999999999977743332211 1111 12244 48999
Q ss_pred hcccc-cchheeEcCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhc
Q 019868 285 AGLAG-LRVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 285 ~gl~G-~R~G~l~~~~~~i~~l~~~-------~~~~~~~~~~q~aa~~~L~ 327 (334)
++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+
T Consensus 276 l~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~ 325 (428)
T PRK07986 276 LT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLS 325 (428)
T ss_pred hh-CCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 87 67 5788888899999888642 2346778888888877765
No 332
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.89 E-value=1.2e-07 Score=90.08 Aligned_cols=228 Identities=20% Similarity=0.166 Sum_probs=151.4
Q ss_pred hCCCCCCeeecCCCCCCC--C-CCHHHHHHHhc-CcCCCCCC--CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 90 LGRKPEDIVKIDANENPY--G-PPPEVREALGQ-LKFPYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 90 ~~~~~~~~i~l~~~~~~~--~-~~~~v~~al~~-~~~~~~Yp--~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
+..+++.+||+..+.-+. + .+|.|.+|+++ +..+..|. ....-++-+.+.+.++. .|.|-+++++||+...++
T Consensus 48 ~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~Aell~~~~p~-~e~vrfvnSGTEAtmsAi 126 (432)
T COG0001 48 TDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELAELLIERVPS-IEKVRFVNSGTEATMSAI 126 (432)
T ss_pred EeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCc-ccEEEEecchhHHHHHHH
Confidence 345678889987765443 3 46789999886 55666674 33345677777777763 378999999999999888
Q ss_pred HHhc--CCCCEEEEcCCCChhHHHHHHH-CC--Ce-----------------EEEeeCCCCCCCCHHHHHHhcccC--Cc
Q 019868 164 RCVL--DPGDKIVDCPPTFTMYEFDAAV-NG--AA-----------------VVKVPRKSDFSLNVELIADAVERE--KP 219 (334)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G--~~-----------------v~~v~~~~~~~~d~~~l~~~l~~~--~~ 219 (334)
+.-. ...|+|+..+-+|..+...+.. .| .. ++.+|. + |++.+++++++. +.
T Consensus 127 RlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y--N---D~~al~~~~~~~g~~I 201 (432)
T COG0001 127 RLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY--N---DLEALEEAFEEYGDDI 201 (432)
T ss_pred HHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC--C---CHHHHHHHHHHcCCcE
Confidence 8321 3448898888888755443332 22 11 122221 1 789999988753 56
Q ss_pred eEEEEe-CCCCccccCCcHH----HHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchh
Q 019868 220 KCIFLT-SPNNPDGSIINDE----DLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVG 293 (334)
Q Consensus 220 ~~i~l~-~p~NPtG~~~~~~----~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G 293 (334)
.+|++. -..| -|.+.+.+ .+++|++. +.++|.||+...|.....-... .++-.--+.+|.|..| .|+.+|
T Consensus 202 AaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~--~~gi~PDlttlGKiIG-GGlP~g 277 (432)
T COG0001 202 AAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG--YYGVEPDLTTLGKIIG-GGLPIG 277 (432)
T ss_pred EEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc--ccCcCcchhhhhhhhc-CCccee
Confidence 677776 3455 57766643 34555555 9999999999877632111111 1111122456999998 899999
Q ss_pred eeEcCHHHHHHHHHhcCC-----CCCcHHHHHHHHHHhc
Q 019868 294 YGAFPLSIIEYLWRAKQP-----YNVSVAAEVAACAALQ 327 (334)
Q Consensus 294 ~l~~~~~~i~~l~~~~~~-----~~~~~~~q~aa~~~L~ 327 (334)
.+-+..++.+.+...... ++-|+++.+|+.+.|+
T Consensus 278 a~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~ 316 (432)
T COG0001 278 AFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLE 316 (432)
T ss_pred eeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHH
Confidence 999999999977655432 5678888888887765
No 333
>PRK07036 hypothetical protein; Provisional
Probab=98.88 E-value=7.8e-08 Score=94.65 Aligned_cols=233 Identities=17% Similarity=0.182 Sum_probs=140.5
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---CCC---CCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---PYI---YPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~~~---Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+. ..++ ..|++.+++++ +.. ... ++.....+|-+.|++...-.-+.+++++++++++.
T Consensus 47 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve 126 (466)
T PRK07036 47 DADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVD 126 (466)
T ss_pred ECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHH
Confidence 34677889987663 3343 45888888765 322 111 23333456777777766433468999999999999
Q ss_pred HHHHHhc------C-C-CCEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCCC----CCCC--------H
Q 019868 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSD----FSLN--------V 207 (334)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~----~~~d--------~ 207 (334)
.+++... . + ..+|+...-+|......+... |- .+..++.... ++.+ +
T Consensus 127 ~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 206 (466)
T PRK07036 127 SALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLV 206 (466)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHH
Confidence 9988431 1 2 257887777776544332221 11 1222332110 1111 2
Q ss_pred HHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchhh---hcCCCcEE
Q 019868 208 ELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRMEW---VKKHDNLI 276 (334)
Q Consensus 208 ~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~---~~~~~~~i 276 (334)
+.+++.+. .+++.+|++.-...-.|...+ .+.++++++. ++++|+||++..|...+..... .+- ..++
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDi 285 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDI 285 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCE
Confidence 33444442 245667777755666687765 4556666766 9999999999887543322111 111 1223
Q ss_pred EEcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 277 ~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~ 327 (334)
+ +++|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+
T Consensus 286 v--t~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le 343 (466)
T PRK07036 286 I--TFAKGLT-SGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIE 343 (466)
T ss_pred E--EEccccc-cCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHH
Confidence 3 5799887 67 4899999999998877531 1246778999888888775
No 334
>PRK05965 hypothetical protein; Provisional
Probab=98.87 E-value=1.6e-07 Score=92.25 Aligned_cols=234 Identities=15% Similarity=0.153 Sum_probs=141.8
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC---C---CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP---Y---IYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~---~---~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+- ..++ ..|++.+++.+ +... . .|+.....+|-+.|++...-+.+.++++++++++..
T Consensus 42 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve 121 (459)
T PRK05965 42 DASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVD 121 (459)
T ss_pred ECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHH
Confidence 44677899986652 3333 45888888775 3221 1 233333456777777776434568999999999999
Q ss_pred HHHHHhc------C-C-CCEEEEcCCCChhHHHHHH-HCCC------------eEEEeeCCC----CCCCC--------H
Q 019868 161 LIMRCVL------D-P-GDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKS----DFSLN--------V 207 (334)
Q Consensus 161 ~~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~-~~G~------------~v~~v~~~~----~~~~d--------~ 207 (334)
.+++... + + ..+|+...-+|......+. ..|. .+..++... .+.-| +
T Consensus 122 ~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (459)
T PRK05965 122 SAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASV 201 (459)
T ss_pred HHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHH
Confidence 9988532 1 2 2578888888865433221 1111 112222111 01123 2
Q ss_pred HHHHHhccc---CCceEEEEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhhh-cCCCcEEEE
Q 019868 208 ELIADAVER---EKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVL 278 (334)
Q Consensus 208 ~~l~~~l~~---~~~~~i~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i 278 (334)
+.+++.+.. +++.+|++.-.....|... +.+.++++ ++. ++++|.||++.+|...+.....- ..-..++++
T Consensus 202 ~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~ 281 (459)
T PRK05965 202 AALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLMT 281 (459)
T ss_pred HHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeEE
Confidence 566666642 3567777775555567755 55555444 444 99999999999886433221110 011223443
Q ss_pred cCCchhhcccc-cchheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~ 327 (334)
++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+
T Consensus 282 --~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 337 (459)
T PRK05965 282 --VAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLR 337 (459)
T ss_pred --echhhc-cCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHH
Confidence 799987 68 489999999999887742 12246788888888887764
No 335
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.87 E-value=1.3e-07 Score=92.66 Aligned_cols=233 Identities=13% Similarity=0.107 Sum_probs=142.3
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.+||+..+ ...++ ..|++.+++.+ +.. . ..|+.....+|-+.|++..+..-+.++++++++++...
T Consensus 50 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~ 129 (453)
T PRK06943 50 DRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEI 129 (453)
T ss_pred eCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHH
Confidence 3467788998766 33444 45888888765 321 1 12344445677777777765433689999999999999
Q ss_pred HHHHhc-------CC-CCEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCC------------CCHH
Q 019868 162 IMRCVL-------DP-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFS------------LNVE 208 (334)
Q Consensus 162 ~~~~l~-------~~-gd~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~------------~d~~ 208 (334)
+++.-. .+ ..+|+...-+|......+.. .|- .+..++..+... -+++
T Consensus 130 AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 209 (453)
T PRK06943 130 ALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALA 209 (453)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHH
Confidence 988541 12 36788888888654322211 110 122232111100 1246
Q ss_pred HHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEE
Q 019868 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVL 278 (334)
Q Consensus 209 ~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i 278 (334)
.+++.+.. +++.+|++.- ...-.|... +.+.++++ ++. ++++|.||++.+|...+.... ..+-.+ ++++
T Consensus 210 ~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~P-Divt 288 (453)
T PRK06943 210 DVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWP-DFLC 288 (453)
T ss_pred HHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCC-CeEe
Confidence 66666642 4566777764 255567754 56555555 444 999999999998854332221 111112 2333
Q ss_pred cCCchhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~ 327 (334)
++|.++ .| +.+|.+++++++.+.+.. ....|+.|+++.+++.+.|+
T Consensus 289 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (453)
T PRK06943 289 --LSKGIS-GGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLD 343 (453)
T ss_pred --eehhhc-cCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHH
Confidence 699988 68 589999999999887753 22246778888888888774
No 336
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.86 E-value=3e-08 Score=93.41 Aligned_cols=193 Identities=19% Similarity=0.202 Sum_probs=139.3
Q ss_pred CCCHHHHHHHhcCcCCC-----CCCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh
Q 019868 108 GPPPEVREALGQLKFPY-----IYPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT 181 (334)
Q Consensus 108 ~~~~~v~~al~~~~~~~-----~Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~ 181 (334)
+..+.+.+++....... .-... ...++.+.+|+++|+ ++.+++..| -....+.+-+++.||.-|+-..-.|.
T Consensus 155 ~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~-e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHa 232 (519)
T KOG1357|consen 155 PCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGV-EDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHA 232 (519)
T ss_pred cCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCC-cceEEEecc-ccccccCcceeecCCcceeeccccch
Confidence 34567777776532211 11222 256899999999996 467888777 45566677788999999999999999
Q ss_pred hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc------CCc-----eEEEEe-CCCCccccCCcHHHHHHHHhC-CC
Q 019868 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER------EKP-----KCIFLT-SPNNPDGSIINDEDLLKILEM-PI 248 (334)
Q Consensus 182 ~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~------~~~-----~~i~l~-~p~NPtG~~~~~~~l~~l~~~-~~ 248 (334)
....-++..|++++.+..+ |..+||+.+++ +++ |++++. .-...-|.+....++.++.+. ..
T Consensus 233 Si~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkyka 307 (519)
T KOG1357|consen 233 SLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKA 307 (519)
T ss_pred heeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccE
Confidence 9999999999999888753 34555554431 221 333333 667789999999999999988 99
Q ss_pred eEEEccCCcCccCCCC---c--hhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC
Q 019868 249 LVVLDEAYTEFSGLES---R--MEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ 310 (334)
Q Consensus 249 ~lIvDeay~~~~~~~~---~--~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~ 310 (334)
+++.||+++-.+.+.. . ....+..+.+|..++|.|.||.+| ||+.+++++++.++....
T Consensus 308 yl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s~ 371 (519)
T KOG1357|consen 308 YLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSP 371 (519)
T ss_pred EEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCCC
Confidence 9999999986553211 1 112234567899999999999888 999999999998875544
No 337
>PRK07480 putative aminotransferase; Validated
Probab=98.86 E-value=9.4e-08 Score=93.82 Aligned_cols=233 Identities=18% Similarity=0.193 Sum_probs=139.6
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC------CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP------YIYPDPESRRLRAALAKDSGLESDHILVGCGADELID 160 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~------~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~ 160 (334)
..+++.+||+..+. ..++ ..|++.+++++ +... ..|+.+...+|.+.|++.++-.-+.++++++++++..
T Consensus 46 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e 125 (456)
T PRK07480 46 DSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGFNHVFFTNSGSEAND 125 (456)
T ss_pred eCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHH
Confidence 44677889987652 3344 45888888765 3221 1234444567888888877544568999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCCe------------EEEeeCCCCC----CCC--------H
Q 019868 161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA------------VVKVPRKSDF----SLN--------V 207 (334)
Q Consensus 161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~~------------v~~v~~~~~~----~~d--------~ 207 (334)
.+++.... +| .+|+...-+|......+.. .|.. +..++....+ ..+ +
T Consensus 126 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 205 (456)
T PRK07480 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAA 205 (456)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHH
Confidence 99884321 23 4677777777643322211 1111 1112211100 011 2
Q ss_pred HHHHHhcc---cCCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868 208 ELIADAVE---REKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV 277 (334)
Q Consensus 208 ~~l~~~l~---~~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~ 277 (334)
+.+++.+. ..++.+|++.-...-.|...+ .+.+++|++. ++++|+||++.+|...+.... ..+- ..++
T Consensus 206 ~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDi- 283 (456)
T PRK07480 206 RQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDL- 283 (456)
T ss_pred HHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCe-
Confidence 55554442 135667777655555677665 3455556665 999999999988853332211 1111 1223
Q ss_pred EcCCchhhcccc-cchheeEcCHHHHHHHHH------hcCCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~------~~~~~~~~~~~q~aa~~~L~ 327 (334)
-+|+|.++ .| +.+|.+++++++.+.+.. ....|+.|+++.+++.+.|+
T Consensus 284 -v~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~ 338 (456)
T PRK07480 284 -MTIAKGLT-SGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLR 338 (456)
T ss_pred -eeeehhhc-cCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHH
Confidence 35899887 57 489999999999887731 22347789999999888875
No 338
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.85 E-value=2.1e-07 Score=91.46 Aligned_cols=233 Identities=16% Similarity=0.187 Sum_probs=139.2
Q ss_pred CCCCCCeeecCCC-CCCCC-CCHHHHHHHhc-CcC-C---CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 91 GRKPEDIVKIDAN-ENPYG-PPPEVREALGQ-LKF-P---YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 91 ~~~~~~~i~l~~~-~~~~~-~~~~v~~al~~-~~~-~---~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
..++..+||+..+ ...++ ..|++.+++.+ +.. . ..|+.....+|.+.|++.++-..+.+++++++++++..++
T Consensus 68 D~dG~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~Al 147 (459)
T PRK06082 68 DVDGKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMAL 147 (459)
T ss_pred ECCCCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHH
Confidence 3467788998633 23355 66888888765 321 1 2344445667888888887633468999999999999998
Q ss_pred HHhc--CCCCEEEEcCCCChhHHHHHH-HCCC------------eEEEeeCCCC----CC-CC------HHHHHHhccc-
Q 019868 164 RCVL--DPGDKIVDCPPTFTMYEFDAA-VNGA------------AVVKVPRKSD----FS-LN------VELIADAVER- 216 (334)
Q Consensus 164 ~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~G~------------~v~~v~~~~~----~~-~d------~~~l~~~l~~- 216 (334)
+... ....+|+...-.|......+. ..|. .+..+|.... +. .| ++.+++.+++
T Consensus 148 klAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 227 (459)
T PRK06082 148 KLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE 227 (459)
T ss_pred HHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC
Confidence 8432 223678777777765433222 2221 1122221110 10 11 3456666642
Q ss_pred CCceEEEEeCCCCccccCCcH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEEcCCchhhcccc-
Q 019868 217 EKPKCIFLTSPNNPDGSIIND---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVLRTFSKRAGLAG- 289 (334)
Q Consensus 217 ~~~~~i~l~~p~NPtG~~~~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i~S~SK~~gl~G- 289 (334)
.++.+|++.-..+..+...+. ++++++++. ++++|+||++.+|...+.... ..+- ..++++ ++|.+| .|
T Consensus 228 ~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~-gG~ 303 (459)
T PRK06082 228 GGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLG-GGL 303 (459)
T ss_pred CCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--eccccc-CCC
Confidence 345566665445544445664 455555655 999999999988754332211 1111 122443 899987 56
Q ss_pred cchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868 290 LRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 290 ~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~ 327 (334)
+.+|.+++.+++.+.... ....++.++++.+++.+.|+
T Consensus 304 ~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 343 (459)
T PRK06082 304 VPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIE 343 (459)
T ss_pred CcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHH
Confidence 589999998887654321 11346788888888888775
No 339
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.85 E-value=2.9e-07 Score=89.75 Aligned_cols=233 Identities=15% Similarity=0.165 Sum_probs=140.0
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC---C-C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF---P-Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~---~-~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+ ...++ ..|++.+++++ +.. . . .|..+...+|.+.|++..+...+.++++++++++...
T Consensus 40 D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~ 119 (429)
T PRK06173 40 LKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEV 119 (429)
T ss_pred cCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHH
Confidence 3467788998665 23333 35788877765 221 1 1 2344445678888887765445689999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCC-CCC-----CCHHHHHHh
Q 019868 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKS-DFS-----LNVELIADA 213 (334)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~-~~~-----~d~~~l~~~ 213 (334)
+++.... +| .+|+...-+|......+.. .|- .+..+|... .+. -+++.+++.
T Consensus 120 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~ 199 (429)
T PRK06173 120 AMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDL 199 (429)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHH
Confidence 9885321 33 5688888777653222211 110 112222111 010 135666777
Q ss_pred ccc--CCceEEEEeCC-CCccccC-CcHHHHHHHHh---C-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCch
Q 019868 214 VER--EKPKCIFLTSP-NNPDGSI-INDEDLLKILE---M-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSK 283 (334)
Q Consensus 214 l~~--~~~~~i~l~~p-~NPtG~~-~~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK 283 (334)
+.. +++.+|++.-. ..-.|.. .+.+.++++.+ . ++++|+||++.+|...+... ...+ -..++++ |+|
T Consensus 200 i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g-v~PDiv~--~gK 276 (429)
T PRK06173 200 LEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAG-VVPDIMC--IGK 276 (429)
T ss_pred HHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcC-CCCCEEE--eeh
Confidence 642 35667777642 5556765 56666666554 3 99999999997764333221 1111 1223444 999
Q ss_pred hhcccc-cchheeEcCHHHHHHHHH-------hcCCCCCcHHHHHHHHHHhc
Q 019868 284 RAGLAG-LRVGYGAFPLSIIEYLWR-------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 284 ~~gl~G-~R~G~l~~~~~~i~~l~~-------~~~~~~~~~~~q~aa~~~L~ 327 (334)
.++ .| +-+|.+++++++.+.+.. ....+..++++.+++.++|+
T Consensus 277 ~l~-gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 327 (429)
T PRK06173 277 ALT-GGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIR 327 (429)
T ss_pred hhh-CCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 986 67 467888889998887753 11235678888888887765
No 340
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.85 E-value=3.4e-07 Score=89.93 Aligned_cols=233 Identities=15% Similarity=0.219 Sum_probs=139.4
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.+||+..+. ..++ ..|++.+++.+ +... ..| +.+...+|-+.|++..+...+.++++++++++...
T Consensus 49 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~ 128 (457)
T PRK05639 49 DVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDM 128 (457)
T ss_pred eCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 44678899997763 3444 45788888765 3221 122 33344568888887765444689999999999999
Q ss_pred HHHHhc--CCCCEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCCCC--------CCH--------HH
Q 019868 162 IMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFS--------LNV--------EL 209 (334)
Q Consensus 162 ~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~--------~d~--------~~ 209 (334)
+++.-. ....+|+....+|......+.. .|. .+..+|..+.+. -|. +.
T Consensus 129 AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (457)
T PRK05639 129 AIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDY 208 (457)
T ss_pred HHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHH
Confidence 988432 2335788777777654332221 111 123333221110 022 23
Q ss_pred HHHhc-----ccCCceEEEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868 210 IADAV-----EREKPKCIFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV 277 (334)
Q Consensus 210 l~~~l-----~~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~ 277 (334)
+++.+ ...++.+|++.-.....|... +.+.++++.+ . ++++|+||++.+|...+.... ..+- ..+++
T Consensus 209 le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv 287 (457)
T PRK05639 209 LENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLI 287 (457)
T ss_pred HHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEE
Confidence 44433 124567777764455567655 5655555544 4 999999999987754332211 1111 22344
Q ss_pred EcCCchhhcccccchheeEcCHHHHHHHHH-hcCCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWR-AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~-~~~~~~~~~~~q~aa~~~L~ 327 (334)
+ |+|.+| .|+.+|.+++++++.+.... ....+..++++.+++.+.|+
T Consensus 288 ~--~gK~l~-gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~ 335 (457)
T PRK05639 288 I--FGKGVA-SGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLE 335 (457)
T ss_pred E--echhhc-CCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHH
Confidence 4 899987 68889999999998883211 12235678888777777764
No 341
>PRK07481 hypothetical protein; Provisional
Probab=98.82 E-value=2.4e-07 Score=90.83 Aligned_cols=232 Identities=16% Similarity=0.170 Sum_probs=137.7
Q ss_pred CCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC------CCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHHHH
Q 019868 92 RKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY------IYPDPESRRLRAALAKDSG-LESDHILVGCGADELID 160 (334)
Q Consensus 92 ~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~------~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~i~ 160 (334)
.+++.+||+..+ ...++ ..|++.+++++ +.... .++.+...+|.+.|++.++ -..+.+++++++++++.
T Consensus 39 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve 118 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVE 118 (449)
T ss_pred CCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHH
Confidence 467788998655 23344 45788888765 32211 2344445667777777763 22358999999999999
Q ss_pred HHHHHhcC-------CC-CEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCC----CCC-CCHHHH----
Q 019868 161 LIMRCVLD-------PG-DKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKS----DFS-LNVELI---- 210 (334)
Q Consensus 161 ~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~----~~~-~d~~~l---- 210 (334)
.+++.-.. +| .+|+...-.|......+... |- .+..++.+. .|. .|++.+
T Consensus 119 ~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~ 198 (449)
T PRK07481 119 TALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARIC 198 (449)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHH
Confidence 99884321 23 57888887776544322221 10 122222111 111 244433
Q ss_pred ----HHhcc---cCCceEEEEeCCCCccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868 211 ----ADAVE---REKPKCIFLTSPNNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (334)
Q Consensus 211 ----~~~l~---~~~~~~i~l~~p~NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i 276 (334)
++.+. .+++.+|++.-...-.|... +. ++++++++. ++++|.||++.+|...+.... ..+- ..++
T Consensus 199 ~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDi 277 (449)
T PRK07481 199 ARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDI 277 (449)
T ss_pred HHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCE
Confidence 33332 24567777765555567755 44 445555655 999999999998854332211 1111 1223
Q ss_pred EEcCCchhhcccc-cchheeEcCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhc
Q 019868 277 VLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWRA---------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 277 ~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~~---------~~~~~~~~~~q~aa~~~L~ 327 (334)
+ +++|.++ .| +.+|.+++++++.+.+... ...|+.++++.+++.+.|+
T Consensus 278 v--~~gKgl~-gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~ 335 (449)
T PRK07481 278 M--CLAKGIT-SGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLD 335 (449)
T ss_pred E--EEeeccc-CCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 3 3699887 57 5899999999998877531 2236778988888888764
No 342
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.82 E-value=3.5e-07 Score=88.93 Aligned_cols=233 Identities=12% Similarity=0.137 Sum_probs=138.9
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCC---C--CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFP---Y--IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~---~--~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+ ...++ ..|++.+++.+ ++.. . .+..+...+|.+.|++..+-.-+.++++++++++...
T Consensus 36 D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~ 115 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEV 115 (422)
T ss_pred ECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHH
Confidence 3467788998765 33344 45788888765 3221 1 1233345677788877765334689999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC-------------eEEEeeCCCCCCCC-------HHHHHH
Q 019868 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA-------------AVVKVPRKSDFSLN-------VELIAD 212 (334)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~-------------~v~~v~~~~~~~~d-------~~~l~~ 212 (334)
+++.-.. ++ .+|+...-+|......+.. .+- ....+|.......+ .+.+++
T Consensus 116 AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 195 (422)
T PRK05630 116 AIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLEL 195 (422)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHHHHHH
Confidence 8884321 22 5788888877653322221 111 11223321111111 234444
Q ss_pred hcccCCceEEEEeC-CCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhh
Q 019868 213 AVEREKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRA 285 (334)
Q Consensus 213 ~l~~~~~~~i~l~~-p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~ 285 (334)
.+. +++.+|++.- ...-.|... +.+.++++ ++. ++++|+||++..|...+.....- ..-..+++ +|+|.+
T Consensus 196 ~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l 272 (422)
T PRK05630 196 LID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIM--CVGKAL 272 (422)
T ss_pred HHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCee--eeechh
Confidence 454 4677777764 255567654 45555544 544 99999999998775333222111 11122233 789987
Q ss_pred cccc-cchheeEcCHHHHHHHHHh--------cCCCCCcHHHHHHHHHHhc
Q 019868 286 GLAG-LRVGYGAFPLSIIEYLWRA--------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 286 gl~G-~R~G~l~~~~~~i~~l~~~--------~~~~~~~~~~q~aa~~~L~ 327 (334)
+ .| ..+|++++++++.+.+... ...|..++++.+++.++|+
T Consensus 273 ~-gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~ 322 (422)
T PRK05630 273 T-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLE 322 (422)
T ss_pred h-cCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHH
Confidence 5 46 5789999999999887531 2347788888888887764
No 343
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.82 E-value=2.4e-07 Score=91.19 Aligned_cols=233 Identities=12% Similarity=0.152 Sum_probs=140.1
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+. ..++ ..|++.+++.+ +... ..|......+|.+.|++......+.++++++++++...
T Consensus 43 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 122 (466)
T PRK07030 43 DFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEV 122 (466)
T ss_pred ECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHH
Confidence 34677889987663 3333 45788887765 3221 12333345667777777665344689999999999999
Q ss_pred HHHHhc------C-C-CCEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCC----CC--------CHH
Q 019868 162 IMRCVL------D-P-GDKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE 208 (334)
Q Consensus 162 ~~~~l~------~-~-gd~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~----~~--------d~~ 208 (334)
+++... . + ..+|+...-+|......+.. .|. .+..+|..+.+ +. +++
T Consensus 123 AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~ 202 (466)
T PRK07030 123 ALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFA 202 (466)
T ss_pred HHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHH
Confidence 988531 1 2 35788888778654433222 111 12223311111 11 245
Q ss_pred HHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHH---HHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEE
Q 019868 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVL 278 (334)
Q Consensus 209 ~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i 278 (334)
.+++.+.. +++.+|++.- ...-.|... +.+.+++ +++. ++++|.||++.+|...+..... .+- ..++++
T Consensus 203 ~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~ 281 (466)
T PRK07030 203 HMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLC 281 (466)
T ss_pred HHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEe
Confidence 56666642 3566777664 244456644 4555544 4554 9999999999888643322111 111 122333
Q ss_pred cCCchhhcccc-cchheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~ 327 (334)
|+|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+
T Consensus 282 --~gKgl~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~ 337 (466)
T PRK07030 282 --LSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLD 337 (466)
T ss_pred --eehhcc-CCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 699987 78 489999999999887742 12336778999888888774
No 344
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.81 E-value=1.1e-07 Score=94.62 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=112.2
Q ss_pred EEEeCCHHHHHHHHHHHh----cC----------------------CCCEEEEcCCCChhHHHHHHHCCC---eEEEeeC
Q 019868 149 ILVGCGADELIDLIMRCV----LD----------------------PGDKIVDCPPTFTMYEFDAAVNGA---AVVKVPR 199 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l----~~----------------------~gd~Vl~~~p~y~~~~~~~~~~G~---~v~~v~~ 199 (334)
-++|+|++++....+.+- +. ++..|++++-.|......++..|. +++.+|.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 567888888877665532 11 134688888999999999998888 7889998
Q ss_pred CCCCCCCHHHHHHhccc---CCceEEEEe--CCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhhcC-
Q 019868 200 KSDFSLNVELIADAVER---EKPKCIFLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWVKK- 271 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~---~~~~~i~l~--~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~~~- 271 (334)
++++.+|+++|++++++ .+++.+.++ ..++.||.+-|.+++.++++. ++++++|.+|..... .+.....+..
T Consensus 242 d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gl 321 (522)
T TIGR03799 242 DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGI 321 (522)
T ss_pred CCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCc
Confidence 88899999999998852 345555554 557799999999999999988 999999999986432 1111122222
Q ss_pred CCcEEEEcCCchhhcccccchheeEcC-HHHHHHH
Q 019868 272 HDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYL 305 (334)
Q Consensus 272 ~~~~i~i~S~SK~~gl~G~R~G~l~~~-~~~i~~l 305 (334)
..-..++.+.+|.++ .-..+|.+++. ++..+.+
T Consensus 322 e~aDSit~d~HK~l~-~P~g~G~llvr~~~~~~~~ 355 (522)
T TIGR03799 322 ERADSVTIDAHKQLY-VPMGAGMVLFKDPALMSAI 355 (522)
T ss_pred hhCCEEEEChhhcCC-cCcccEEEEEeCHHHHHHh
Confidence 234578889999543 33558988874 4554544
No 345
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.81 E-value=2.9e-07 Score=90.51 Aligned_cols=233 Identities=15% Similarity=0.174 Sum_probs=141.6
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcC---C--CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKF---P--YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~---~--~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.+||+..+. ..++ .+|++.+++.+ +.. . ..++.....+|-+.|++.++-..+.++++++++++...
T Consensus 52 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~ 131 (460)
T PRK06916 52 DVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEI 131 (460)
T ss_pred eCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHH
Confidence 34677889986652 3333 45788888765 322 1 12344445678888888775334689999999999999
Q ss_pred HHHHhc-------CCC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCC----CC--------CCHH
Q 019868 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSD----FS--------LNVE 208 (334)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~----~~--------~d~~ 208 (334)
+++... .+| .+|+...-+|......+.. .|. .+..+|.... +. -+++
T Consensus 132 AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~ 211 (460)
T PRK06916 132 AIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE 211 (460)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHH
Confidence 988432 133 6788888888654432222 111 1222321110 11 1345
Q ss_pred HHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--hhcCCCcEEEE
Q 019868 209 LIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--WVKKHDNLIVL 278 (334)
Q Consensus 209 ~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~i 278 (334)
.+++.++. +++.+|++.- ...-.|... +.+.++++.+ . ++++|.||++.+|...+.... ..+- ..+++
T Consensus 212 ~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv- 289 (460)
T PRK06916 212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIM- 289 (460)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCee-
Confidence 66666642 3566777664 355567654 6666665544 3 999999999988753332211 1111 12233
Q ss_pred cCCchhhcccc-cchheeEcCHHHHHHHHH---------hcCCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---------~~~~~~~~~~~q~aa~~~L~ 327 (334)
+++|.++ .| +.+|.+++++++.+.+.. ....++.++++.+++.+.|+
T Consensus 290 -~~gK~l~-gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 346 (460)
T PRK06916 290 -TAGKGLT-GGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLE 346 (460)
T ss_pred -eeehhhh-cCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHH
Confidence 4799987 67 589999999999887642 11236678888888888764
No 346
>PRK06917 hypothetical protein; Provisional
Probab=98.80 E-value=6.4e-07 Score=87.77 Aligned_cols=233 Identities=15% Similarity=0.155 Sum_probs=139.2
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-CC----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-PY----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~~----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.+||+..| ...++ ..|++.+++++ +.. .+ .|+.....+|.+.|++.++-..+.++++++++++...
T Consensus 27 D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 106 (447)
T PRK06917 27 DQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANET 106 (447)
T ss_pred eCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHH
Confidence 3467789998766 33344 46888888765 322 11 2333334567777777765334689999999999999
Q ss_pred HHHHhc-------CCC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCC----CC--------CHH
Q 019868 162 IMRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDF----SL--------NVE 208 (334)
Q Consensus 162 ~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~----~~--------d~~ 208 (334)
+++... .+| .+|+...-.|......+.. .|. .+..++....+ .- +++
T Consensus 107 AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 186 (447)
T PRK06917 107 AMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACAT 186 (447)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHH
Confidence 998541 123 6788888778654433222 121 11112211000 00 235
Q ss_pred HHHHhccc---CCceEEEEeCCC-CccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEEE
Q 019868 209 LIADAVER---EKPKCIFLTSPN-NPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLIV 277 (334)
Q Consensus 209 ~l~~~l~~---~~~~~i~l~~p~-NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i~ 277 (334)
.+++.++. +++.+|++.-.. +--|... +.+.++++ ++. ++++|+||++.+|...+.... ..+-.+ ++
T Consensus 187 ~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~P-Di- 264 (447)
T PRK06917 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEP-DI- 264 (447)
T ss_pred HHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCC-CE-
Confidence 66666642 346677776333 3344544 56655555 444 999999999987753332211 111112 23
Q ss_pred EcCCchhhccccc-chheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868 278 LRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 278 i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~ 327 (334)
-+|+|.+| .|. .+|.+++.+++.+.+... ...++.++++.+++.+.|+
T Consensus 265 -~~~gK~l~-~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~ 319 (447)
T PRK06917 265 -MTLGKGLG-AGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLE 319 (447)
T ss_pred -EEeeehhc-cCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHH
Confidence 35799987 675 899999999998877532 1236778888888888775
No 347
>PRK07483 hypothetical protein; Provisional
Probab=98.80 E-value=6.9e-07 Score=87.44 Aligned_cols=233 Identities=13% Similarity=0.158 Sum_probs=136.8
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
..+++.++|+..+ ...++ .+|++.+++++ +.... .|..+...+|.+.|++...-..+.++++++++++...
T Consensus 26 D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~ 105 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEA 105 (443)
T ss_pred eCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHH
Confidence 3467789999766 33444 45888888765 32211 1333334567777777664334689999999999999
Q ss_pred HHHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCC------------eEEEeeCCCCCCC-----C--------H
Q 019868 162 IMRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGA------------AVVKVPRKSDFSL-----N--------V 207 (334)
Q Consensus 162 ~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~------------~v~~v~~~~~~~~-----d--------~ 207 (334)
+++.... +| .+|+...-.|......+.. .|- .+..++....+.- + +
T Consensus 106 AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (443)
T PRK07483 106 ALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLA 185 (443)
T ss_pred HHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHH
Confidence 8884321 33 4678777777644322221 111 1122221111110 0 2
Q ss_pred HHHHHhcc---cCCceEEEEeCCCC-ccccCC-cHHHHHH---HHhC-CCeEEEccCCcCccCCCCchh--hhcCCCcEE
Q 019868 208 ELIADAVE---REKPKCIFLTSPNN-PDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRME--WVKKHDNLI 276 (334)
Q Consensus 208 ~~l~~~l~---~~~~~~i~l~~p~N-PtG~~~-~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~--~~~~~~~~i 276 (334)
+.+++.+. .+++.+|++.-... --|... +.+.+++ +++. ++++|.||++.+|...+.... ..+- ..++
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCe
Confidence 45665453 13566777764332 235544 5545544 4554 999999999998854332221 1111 1223
Q ss_pred EEcCCchhhccccc-chheeEcCHHHHHHHHHh------cCCCCCcHHHHHHHHHHhc
Q 019868 277 VLRTFSKRAGLAGL-RVGYGAFPLSIIEYLWRA------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 277 ~i~S~SK~~gl~G~-R~G~l~~~~~~i~~l~~~------~~~~~~~~~~q~aa~~~L~ 327 (334)
+ +++|.++ .|+ .+|.+++++++.+.+... ...|+-|+++.+++.+.|+
T Consensus 265 v--~~gK~l~-gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~ 319 (443)
T PRK07483 265 V--TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQR 319 (443)
T ss_pred e--eehhhhc-cCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHH
Confidence 3 4799987 685 899999999998877532 2346788888888888774
No 348
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.79 E-value=1.5e-07 Score=97.61 Aligned_cols=173 Identities=14% Similarity=0.117 Sum_probs=117.8
Q ss_pred hHHHHHHHHHhcCCCCCCEEEeCCHHHHHH--HHHHH-hcC---C-CCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCC
Q 019868 131 SRRLRAALAKDSGLESDHILVGCGADELID--LIMRC-VLD---P-GDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDF 203 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~--~~~~~-l~~---~-gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~ 203 (334)
..+|.+.++++.|.+.-.+.-.+|+..-+. ++++. ... + .++|+++.-.|+.....+...|++++.++.++++
T Consensus 545 i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D~~G 624 (954)
T PRK12566 545 IDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRVVIVECDPDG 624 (954)
T ss_pred HHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEEEEeccCCCC
Confidence 357888888888976554444444433212 22222 122 2 3678899888866566677899999999987778
Q ss_pred CCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC
Q 019868 204 SLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT 280 (334)
Q Consensus 204 ~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S 280 (334)
.+|+++|++.+++ .++.+|++++|++-.+...+.+++.++++. ++++++|.++..-. .......+.+-++++++
T Consensus 625 ~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~---~~l~~Pg~~GADi~~~s 701 (954)
T PRK12566 625 NVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ---VGLARPADIGADVSHMN 701 (954)
T ss_pred CcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc---cCCCChhhcCCCEEEec
Confidence 9999999999862 467788888988866666668888888877 99999999985211 11122234566799999
Q ss_pred Cchhhccc----ccchheeEcCHHHHHHHH
Q 019868 281 FSKRAGLA----GLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 281 ~SK~~gl~----G~R~G~l~~~~~~i~~l~ 306 (334)
+.|.|+.| |.-+|.+.+.+.+...+.
T Consensus 702 ~HKtf~~P~G~GGP~vG~iav~~~L~pfLp 731 (954)
T PRK12566 702 LHKTFCIPHGGGGPGMGPIGVRAHLAPFVA 731 (954)
T ss_pred CCcccCcCccCCCCccchhhhhhhhhhhcc
Confidence 99988533 555676666665554444
No 349
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.79 E-value=3.9e-07 Score=88.79 Aligned_cols=232 Identities=14% Similarity=0.145 Sum_probs=136.2
Q ss_pred CCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC----C-CCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 92 RKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP----Y-IYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 92 ~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~----~-~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
.++.+++|+..|. ..++ .+|++.+++.+ +... . .++.....++-+.+++..+-.-+.+++++++++++..+
T Consensus 42 ~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~f~~sGseA~e~A 121 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVA 121 (427)
T ss_pred CCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHH
Confidence 3567789987653 2333 45788877765 3211 1 12333456777888887754447899999999999988
Q ss_pred HHHhcC-------CC-CEEEEcCCCChhHHHHHHH-CCCe-------------EEEeeCC-CCCC-----CCHHHHHHhc
Q 019868 163 MRCVLD-------PG-DKIVDCPPTFTMYEFDAAV-NGAA-------------VVKVPRK-SDFS-----LNVELIADAV 214 (334)
Q Consensus 163 ~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~-~G~~-------------v~~v~~~-~~~~-----~d~~~l~~~l 214 (334)
++.-.. +| .+|+...-+|......+.. .|.. +..++.. ..+. -|++++++.+
T Consensus 122 lklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l 201 (427)
T TIGR00508 122 LKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLM 201 (427)
T ss_pred HHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHH
Confidence 884321 23 5788888777654322222 1211 1111110 1111 1456667666
Q ss_pred cc--CCceEEEEeCC-CCcccc-CCcHHHHHHHHhC----CCeEEEccCCcCccCCCCc--hhhhcCCCcEEEEcCCchh
Q 019868 215 ER--EKPKCIFLTSP-NNPDGS-IINDEDLLKILEM----PILVVLDEAYTEFSGLESR--MEWVKKHDNLIVLRTFSKR 284 (334)
Q Consensus 215 ~~--~~~~~i~l~~p-~NPtG~-~~~~~~l~~l~~~----~~~lIvDeay~~~~~~~~~--~~~~~~~~~~i~i~S~SK~ 284 (334)
.. ++..+|++... .+-.|. ..+.+.+.+|.+. ++++|+||++.+|...+.. ....+- ...+++ ++|.
T Consensus 202 ~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~ 278 (427)
T TIGR00508 202 ELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILC--VGKA 278 (427)
T ss_pred HhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEE--echh
Confidence 42 34556665542 444454 3456666666543 9999999999776433321 111111 222443 8999
Q ss_pred hccccc-chheeEcCHHHHHHHHHh-------cCCCCCcHHHHHHHHHHhc
Q 019868 285 AGLAGL-RVGYGAFPLSIIEYLWRA-------KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 285 ~gl~G~-R~G~l~~~~~~i~~l~~~-------~~~~~~~~~~q~aa~~~L~ 327 (334)
++ .|+ -++.++.++++.+.+... ...|..++++.+++.++|+
T Consensus 279 l~-gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~ 328 (427)
T TIGR00508 279 LT-GGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLA 328 (427)
T ss_pred hh-cCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHH
Confidence 86 674 577788889998887642 1235668888888887776
No 350
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.78 E-value=5.5e-07 Score=84.81 Aligned_cols=212 Identities=18% Similarity=0.103 Sum_probs=145.2
Q ss_pred CHHHHHHHhcC-c---CCCCCCCcC--hHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHHHhcCCCCEEE-----EcC
Q 019868 110 PPEVREALGQL-K---FPYIYPDPE--SRRLRAALAKDSGLE-SDHILVGCGADELIDLIMRCVLDPGDKIV-----DCP 177 (334)
Q Consensus 110 ~~~v~~al~~~-~---~~~~Yp~~g--~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl-----~~~ 177 (334)
.+++.+++... . ....|-..+ ..+++.....+.++. .+.+++++..+.++..++.++..++..|+ ++
T Consensus 40 ~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~- 118 (395)
T COG1921 40 SPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVE- 118 (395)
T ss_pred CHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEcccccc-
Confidence 46777776542 1 112232222 344543333344553 57899999999999999998876444443 33
Q ss_pred CCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868 178 PTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (334)
Q Consensus 178 p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea 255 (334)
+..+......+..|++++.+-.. ..-...+++.++. +++++++=. +.|.+-=..++.+++.+|++. ++++++|.+
T Consensus 119 gg~~~v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIn-e~ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~a 195 (395)
T COG1921 119 GGAFRVPDIIRLAGAKLVEVGTT--NRTHLKDYELAIN-ENTALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLA 195 (395)
T ss_pred CCCCChhHHHHHcCCEEEEeccc--CcCCHHHHHHHhc-cCCeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecC
Confidence 56678899999999999998743 2457889999997 567665544 555444446788999999998 999999998
Q ss_pred CcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHHHhcCC--CCCcHHHHHHHHHHhc
Q 019868 256 YTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP--YNVSVAAEVAACAALQ 327 (334)
Q Consensus 256 y~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~~--~~~~~~~q~aa~~~L~ 327 (334)
-.......+.....-..+..+++.|-.|.+| |.+-|.+++.+++++.+.+..-. +-+..+..++..++|+
T Consensus 196 Sg~~v~~e~~l~~~la~GaDLV~~SgdKllg--GPqaGii~GkKelI~~lq~~~l~Ralrv~K~tla~l~~aLe 267 (395)
T COG1921 196 SGALVDKEPDLREALALGADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQSHPLKRALRVDKETLAALEAALE 267 (395)
T ss_pred CccccccccchhHHHhcCCCEEEEecchhcC--CCccceEechHHHHHHHHhhhhhhhhhcCcHhHHHHHHHHH
Confidence 7665543333333334456799999999875 99999999999999988766544 4455555555555554
No 351
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.74 E-value=6.4e-07 Score=88.28 Aligned_cols=233 Identities=12% Similarity=0.133 Sum_probs=140.2
Q ss_pred CCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc---CCC--CCCCcChHHHHHHHHHhcCC-----CCCCEEEeCCHH
Q 019868 91 GRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK---FPY--IYPDPESRRLRAALAKDSGL-----ESDHILVGCGAD 156 (334)
Q Consensus 91 ~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~---~~~--~Yp~~g~~~lr~~lA~~~~~-----~~~~I~~t~G~~ 156 (334)
..+++.+||+..+ ...++ ..|++.+++.+ +. +.. .|+.....+|-+.|++.+.- +.+.++++++++
T Consensus 60 D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGS 139 (472)
T PRK08742 60 GHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGS 139 (472)
T ss_pred eCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCch
Confidence 3467788998766 33343 45788888765 22 211 23333355677777776642 235899999999
Q ss_pred HHHHHHHHHhcC-------C-CCEEEEcCCCChhHHHHHHHC-CC------------eEEEeeCCCCC----CC------
Q 019868 157 ELIDLIMRCVLD-------P-GDKIVDCPPTFTMYEFDAAVN-GA------------AVVKVPRKSDF----SL------ 205 (334)
Q Consensus 157 ~~i~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~-G~------------~v~~v~~~~~~----~~------ 205 (334)
++...+++.... + ..+|+...-+|......+... |. .+..+|..+.+ +.
T Consensus 140 EAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~ 219 (472)
T PRK08742 140 AGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHH
Confidence 999999885321 2 267888888886554333221 11 12223321111 11
Q ss_pred --CHHHHHHhccc--CCceEEEEeC-CCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhh--hcCCC
Q 019868 206 --NVELIADAVER--EKPKCIFLTS-PNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEW--VKKHD 273 (334)
Q Consensus 206 --d~~~l~~~l~~--~~~~~i~l~~-p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~ 273 (334)
+++.+++.+.. +++.+|++.- ..+-.|... +.+.++++ ++. ++++|.||++.+|...+..... .+- .
T Consensus 220 ~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~ 298 (472)
T PRK08742 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-M 298 (472)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-C
Confidence 24566666632 3566777654 255567644 56555555 444 9999999999988643322211 111 1
Q ss_pred cEEEEcCCchhhcccc-cchheeEcCHHHHHHHHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868 274 NLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR--------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 274 ~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~--------~~~~~~~~~~~q~aa~~~L~ 327 (334)
.++++ ++|.++ .| +.+|.+++++++.+.+.. ....|+.++++.+++.+.|+
T Consensus 299 PDiv~--~gKgl~-gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~ 358 (472)
T PRK08742 299 PDLLC--LSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLD 358 (472)
T ss_pred CCEEE--Eccccc-CCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHH
Confidence 22333 699887 67 489999999999887642 12346778888888888775
No 352
>PLN02880 tyrosine decarboxylase
Probab=98.74 E-value=1.1e-07 Score=94.01 Aligned_cols=166 Identities=14% Similarity=0.101 Sum_probs=118.3
Q ss_pred HHHHHHHHhcCCCCC-------CEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCChhHHHHHHHCCCe-
Q 019868 133 RLRAALAKDSGLESD-------HILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGAA- 193 (334)
Q Consensus 133 ~lr~~lA~~~~~~~~-------~I~~t~G~~~~i~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~G~~- 193 (334)
++.+.+++++|.+.+ .-++|+|++++....+.+-.+ +.-.|++++-.|......+...|+.
T Consensus 126 ~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~ 205 (490)
T PLN02880 126 IVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHP 205 (490)
T ss_pred HHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCH
Confidence 455566666787643 367788888887665543211 1125667888899999999999984
Q ss_pred --EEEeeCC--CCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCC-
Q 019868 194 --VVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGL- 262 (334)
Q Consensus 194 --v~~v~~~--~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~- 262 (334)
++.||.+ +++.+|++.|++++++. .+-+|+.+-..-.||.+-|.+++.++++. ++|+.+|.+|+.+...
T Consensus 206 ~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~ 285 (490)
T PLN02880 206 ENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACIC 285 (490)
T ss_pred HHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhC
Confidence 6777764 36789999999998632 24455556778899999999999999998 9999999999886531
Q ss_pred CCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868 263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 263 ~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
+.....+.. ..-.-+...++|.+ +....+|.+++++
T Consensus 286 ~~~~~~l~gie~aDSit~d~HKwl-~~P~~~g~llvr~ 322 (490)
T PLN02880 286 PEYRHYIDGVEEADSFNMNAHKWF-LTNFDCSLLWVKD 322 (490)
T ss_pred HHHHHHhcCchhcCEEEECchhhc-CCCccEEEEEEeC
Confidence 222222222 23457888999954 5777889988853
No 353
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.73 E-value=4e-07 Score=96.14 Aligned_cols=191 Identities=14% Similarity=0.101 Sum_probs=132.6
Q ss_pred ecCCCCCCCCCCHHHHHHH-hcCcCCCC---C-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868 99 KIDANENPYGPPPEVREAL-GQLKFPYI---Y-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al-~~~~~~~~---Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~ 167 (334)
.++.|..+.-.|+.+.+.+ .+-..... | |. .| ..++++.++++.|++..|+.+..+++++.+.++.++-
T Consensus 80 ~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~ 159 (954)
T PRK05367 80 YIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKR 159 (954)
T ss_pred ccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhh
Confidence 3556666655666664444 33221223 3 22 23 3478899999999999999999999999998887763
Q ss_pred -CC--CCEEEEcCCCChhHHHH----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868 168 -DP--GDKIVDCPPTFTMYEFD----AAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (334)
Q Consensus 168 -~~--gd~Vl~~~p~y~~~~~~----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (334)
.+ +++|++++-.|+.+... ++..|++++.++.+++ ++ .+++.++++.+| |-+|.+.+.+++
T Consensus 160 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~---------~~~~~~vlvq~p-~~~G~i~d~~~i 227 (954)
T PRK05367 160 VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD---------HDDVFGVLLQYP-GTSGEVRDYTAL 227 (954)
T ss_pred hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC---------cccEEEEEEecC-CCCeeeccHHHH
Confidence 44 48999999999876643 4568999999986432 11 134556666676 569999999999
Q ss_pred HHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchh---hcccccchheeEcCHHHHHHH
Q 019868 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKR---AGLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 241 ~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~---~gl~G~R~G~l~~~~~~i~~l 305 (334)
.++++. |+++++|-...-+.- ...+.+.+-++++++..|. +|+.|-..||+.+.+++.+.+
T Consensus 228 ~~~ah~~Gal~~vda~~~Al~~----l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~l 292 (954)
T PRK05367 228 IAAAHARGALVAVAADLLALTL----LTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSM 292 (954)
T ss_pred HHHHHHcCCEEEEEehhhhccC----CCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhC
Confidence 999987 999999874422221 1123455667999999994 133455699999998877655
No 354
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.71 E-value=3e-07 Score=89.75 Aligned_cols=224 Identities=17% Similarity=0.143 Sum_probs=127.8
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCCCCC--CcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPYIYP--DPESRRLRAALAKDSGLESDHILVGCGADELIDLIMR 164 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~~Yp--~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~ 164 (334)
..++..+||+..+. ..++ ..|++.+++++ ++....|. .....+|.+.|++...- .+.++++++++++...+++
T Consensus 44 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~la~~l~~~~p~-~~~v~f~~sGseA~e~Alk 122 (431)
T PRK06209 44 DVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESFLELIDG-ADMVKFCKNGSDATSAAVR 122 (431)
T ss_pred eCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHH
Confidence 44677899987653 3444 45888888876 33322332 22233678888887642 3689999999999999988
Q ss_pred Hhc-CCC-CEEEEc-CCCChhHHHHH-----HHCCC------eEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCC
Q 019868 165 CVL-DPG-DKIVDC-PPTFTMYEFDA-----AVNGA------AVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPN 228 (334)
Q Consensus 165 ~l~-~~g-d~Vl~~-~p~y~~~~~~~-----~~~G~------~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~ 228 (334)
.-. -.| .+|+.. .-.|..+.... ...|. .+..++ .-|++++++.++. .++.+|++. |-
T Consensus 123 lAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~~~~~aavi~E-pv 196 (431)
T PRK06209 123 LARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDHPGRIACVILE-PA 196 (431)
T ss_pred HHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhCCCCEEEEEEc-cc
Confidence 432 123 445543 12221110000 00011 011111 1278888888753 235556654 32
Q ss_pred CccccCCcH---HHHHHHHhC-CCeEEEccCCcCccCCCCchh-hhcCCCcEEEEcCCchhhcccccchheeEcCHHHHH
Q 019868 229 NPDGSIIND---EDLLKILEM-PILVVLDEAYTEFSGLESRME-WVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 303 (334)
Q Consensus 229 NPtG~~~~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~-~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~ 303 (334)
.|...+. +++.++++. ++++|+||++.+|........ ..+- ... +.+++|.+| .|+.+|++++++++++
T Consensus 197 --~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv-~PD--i~t~gK~lg-gG~p~~av~~~~~i~~ 270 (431)
T PRK06209 197 --TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGI-VPD--LSCFGKALG-NGFAVSALAGKREYME 270 (431)
T ss_pred --cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCC-Ccc--eeeehhhhc-CCcccEEEEEHHHHHh
Confidence 2334454 455555555 999999999977643211111 1111 112 356899998 6788999999999888
Q ss_pred H--HHH--------hcCCCCCcHHHHHHHHHHhc
Q 019868 304 Y--LWR--------AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 304 ~--l~~--------~~~~~~~~~~~q~aa~~~L~ 327 (334)
. +.. ....++.++++.+++.+.|+
T Consensus 271 ~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~ 304 (431)
T PRK06209 271 LGGLEHTDRERVFLLSTTHGAETHALAAAIATMA 304 (431)
T ss_pred hhcccccCCCCceeeccCCCCCHHHHHHHHHHHH
Confidence 6 311 11235667777777776654
No 355
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=98.70 E-value=4.7e-07 Score=86.46 Aligned_cols=179 Identities=12% Similarity=0.044 Sum_probs=125.1
Q ss_pred HHHHHhc--CcCCCCCCCcC--hHHHHHHHHHhcCCCCCC--EEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChh-HH
Q 019868 113 VREALGQ--LKFPYIYPDPE--SRRLRAALAKDSGLESDH--ILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTM-YE 184 (334)
Q Consensus 113 v~~al~~--~~~~~~Yp~~g--~~~lr~~lA~~~~~~~~~--I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~-~~ 184 (334)
..+++++ +...++-|... ..+.++.+.++++.+.+. ++++.|++.+++.++..++ ++|++|++.. .|+. +.
T Consensus 19 ~~~~~~~~~~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG~r~~ 97 (374)
T TIGR01365 19 SIEELKNAPLGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFGKGWV 97 (374)
T ss_pred hHHHHhhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHHHHHH
Confidence 5667764 23333334432 567788888888874332 5669999999999999998 5889999876 6654 34
Q ss_pred -HHHHHCCC-eEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCccCC
Q 019868 185 -FDAAVNGA-AVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGL 262 (334)
Q Consensus 185 -~~~~~~G~-~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~ 262 (334)
..++..|+ ++..+..+.+..+|+++++. + +.|++++-.-.||...+.+++.+.. .+.++|+|.+-+-....
T Consensus 98 ~eia~~~g~~~v~~l~~~~g~~~~~~~ve~--~----~~v~~vhnETSTGv~npv~~i~~~~-~~~lliVDavSs~g~~~ 170 (374)
T TIGR01365 98 TDVTKQLKLPDVRVLEAEYGKLPDLKKVDF--K----NDVVFTWNGTTSGVRVPNGDFIPAD-REGLTICDATSAAFAQD 170 (374)
T ss_pred HHHHHhcCCCCcEEEcCCCCCCCCHHHcCC--C----CCEEEecCCCchheecccccccccc-CCCcEEEEccchhcCCC
Confidence 77888999 47777765666789998873 1 2366788888999999986544322 27899999986644321
Q ss_pred CCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 263 ESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 263 ~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
-.+. +-.+++.|..|.+++++ .+++++++++.+++..
T Consensus 171 -l~~d-----~iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~ 207 (374)
T TIGR01365 171 -LDYH-----KLDVVTFSWQKVLGGEG-AHGMLILSPRAVARLE 207 (374)
T ss_pred -CChh-----HCcEEEEechhccCCCC-ceEEEEECHHHHHHHh
Confidence 1111 24589999999998764 3677888888887655
No 356
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.65 E-value=4.1e-07 Score=86.01 Aligned_cols=231 Identities=19% Similarity=0.218 Sum_probs=136.3
Q ss_pred CCCCeeecCCC--CCCCC-CCHHHHHHHhc-CcC-C----CCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH
Q 019868 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-LKF-P----YIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLIM 163 (334)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~~-~----~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~ 163 (334)
+++.++|+..+ ...++ .+|++.+++++ +.. . ..++.+...+|-+.|.+.++-..++++++++++++++.++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Al 93 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAAL 93 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHH
Confidence 56678998654 44454 45788888765 221 1 1222333567888888888545579999999999999999
Q ss_pred HHhc-------C-CCCEEEEcCCCChhHHHH-HHHCC------------CeEEEeeCCCCCC-----CCHHHHH---Hhc
Q 019868 164 RCVL-------D-PGDKIVDCPPTFTMYEFD-AAVNG------------AAVVKVPRKSDFS-----LNVELIA---DAV 214 (334)
Q Consensus 164 ~~l~-------~-~gd~Vl~~~p~y~~~~~~-~~~~G------------~~v~~v~~~~~~~-----~d~~~l~---~~l 214 (334)
+... . .-.+|+...-+|...... ....+ ..+..+|.++... -..+.++ ...
T Consensus 94 kla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 173 (339)
T PF00202_consen 94 KLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAAL 173 (339)
T ss_dssp HHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhh
Confidence 8654 1 336888888888643321 11111 1344555321100 0011122 222
Q ss_pred ccCCceEEEEeCCCCccccCC-cHHHH---HHHHhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcc
Q 019868 215 EREKPKCIFLTSPNNPDGSII-NDEDL---LKILEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGL 287 (334)
Q Consensus 215 ~~~~~~~i~l~~p~NPtG~~~-~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl 287 (334)
..+++.+|++.-...-.|... +.+.+ +++++. ++++|+||++..|...+... ...+- ..++++ ++|.++
T Consensus 174 ~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~--~gK~l~- 249 (339)
T PF00202_consen 174 NADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVT--FGKGLG- 249 (339)
T ss_dssp HGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEE--EEGGGG-
T ss_pred cCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccc-cCcccc--cccchh-
Confidence 234566777764444456555 44444 445554 99999999999986433322 11222 223444 579998
Q ss_pred cccchheeEcCHHHHHHHHHhc--CCCCCcHHHHHHHHHHhc
Q 019868 288 AGLRVGYGAFPLSIIEYLWRAK--QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 288 ~G~R~G~l~~~~~~i~~l~~~~--~~~~~~~~~q~aa~~~L~ 327 (334)
.|+.+|.+++.+++.+.+.... ..++-++++.+++.+.|+
T Consensus 250 gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~ 291 (339)
T PF00202_consen 250 GGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLE 291 (339)
T ss_dssp TTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHH
T ss_pred hhhhcccccccchhhccccccccccccccchHhhhhhhhHHH
Confidence 6799999999999988764322 346778888888888775
No 357
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.65 E-value=3.2e-07 Score=87.78 Aligned_cols=166 Identities=19% Similarity=0.140 Sum_probs=111.2
Q ss_pred HHHHHHHHhcCCCC-------CCEEEeCCHHHHHHHHHHHhc--------CCC-----C-EEEEcCCCChhHHHHHHHCC
Q 019868 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVL--------DPG-----D-KIVDCPPTFTMYEFDAAVNG 191 (334)
Q Consensus 133 ~lr~~lA~~~~~~~-------~~I~~t~G~~~~i~~~~~~l~--------~~g-----d-~Vl~~~p~y~~~~~~~~~~G 191 (334)
++.+.+++++|.+. ..=++|+|+++++...+.+.. ..| . .|++++-.|......+...|
T Consensus 83 ~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lG 162 (373)
T PF00282_consen 83 EVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILG 162 (373)
T ss_dssp HHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTT
T ss_pred HHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceee
Confidence 45556666677762 246788999999877765431 112 2 56777778999999999999
Q ss_pred CeEEEeeCCCCCCCCHHHHHHhcccC--C---ceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCC
Q 019868 192 AAVVKVPRKSDFSLNVELIADAVERE--K---PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LES 264 (334)
Q Consensus 192 ~~v~~v~~~~~~~~d~~~l~~~l~~~--~---~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~ 264 (334)
+.++.||.++++.+|+++|++++.+. + +-+|+.+.....||.+=+.+++.+|++. ++|+.+|.+|..... .+.
T Consensus 163 lg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~ 242 (373)
T PF00282_consen 163 LGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPE 242 (373)
T ss_dssp SEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCT
T ss_pred eEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccccccccccccc
Confidence 99999998888999999999987532 1 2255556778899999999999999987 999999999998331 111
Q ss_pred chhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868 265 RMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 265 ~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
....... ..-.=+.-+++|.++ .-..+|+++...
T Consensus 243 ~~~~~~gi~~adSit~d~HK~l~-~P~~~~~~l~r~ 277 (373)
T PF00282_consen 243 YRHLLFGIERADSITIDPHKWLG-VPYGCGVLLVRD 277 (373)
T ss_dssp TGGGGTTGGGESEEEEETTTTTS--SSS-EEEEESS
T ss_pred ccccccccccccccccchhhhhc-CCccceeEEeec
Confidence 1111111 112245558899665 567889988854
No 358
>PLN02590 probable tyrosine decarboxylase
Probab=98.64 E-value=6e-07 Score=89.37 Aligned_cols=166 Identities=13% Similarity=0.077 Sum_probs=115.9
Q ss_pred HHHHHHHHhcCCCC-------CCEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCChhHHHHHHHCCC--
Q 019868 133 RLRAALAKDSGLES-------DHILVGCGADELIDLIMRCVLD-----------PGDKIVDCPPTFTMYEFDAAVNGA-- 192 (334)
Q Consensus 133 ~lr~~lA~~~~~~~-------~~I~~t~G~~~~i~~~~~~l~~-----------~gd~Vl~~~p~y~~~~~~~~~~G~-- 192 (334)
.+.+.+++++|.+. ..=++++|++++....+.+-.+ +.-.|++++-+|......+...|+
T Consensus 174 ~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~ 253 (539)
T PLN02590 174 IVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHE 253 (539)
T ss_pred HHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCc
Confidence 34555566667764 2356788888877665543211 112566778889999999999988
Q ss_pred -eEEEeeCC--CCCCCCHHHHHHhcccC-----CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-C
Q 019868 193 -AVVKVPRK--SDFSLNVELIADAVERE-----KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-L 262 (334)
Q Consensus 193 -~v~~v~~~--~~~~~d~~~l~~~l~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~ 262 (334)
+++.||.+ +++.+|++.|++++++. .+-+|+.+-..-.||.+=+.++|.+|++. ++|+.+|.+|+.+.. -
T Consensus 254 ~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~ 333 (539)
T PLN02590 254 ENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACIC 333 (539)
T ss_pred ccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcC
Confidence 57888865 46899999999998632 23455656778889999999999999998 999999999998762 1
Q ss_pred CCchhhhcC-CCcEEEEcCCchhhcccccchheeEcCH
Q 019868 263 ESRMEWVKK-HDNLIVLRTFSKRAGLAGLRVGYGAFPL 299 (334)
Q Consensus 263 ~~~~~~~~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~ 299 (334)
+.....+.. ..-.=+...++|.+ ....-+|.+++..
T Consensus 334 ~~~r~~~~Gie~ADSit~D~HK~l-~~p~~cg~llvr~ 370 (539)
T PLN02590 334 PEYRKFIDGIENADSFNMNAHKWL-FANQTCSPLWVKD 370 (539)
T ss_pred hhhHHHhcCCccCCEEEECchhhc-CcCcCEEEEEecC
Confidence 222222221 22235566889954 5677789888754
No 359
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.64 E-value=6.7e-07 Score=83.14 Aligned_cols=235 Identities=16% Similarity=0.135 Sum_probs=148.9
Q ss_pred CCCCCCeeecCCCCC--CC-CCCHHHHHHHhc-C----cCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHH
Q 019868 91 GRKPEDIVKIDANEN--PY-GPPPEVREALGQ-L----KFPYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDLI 162 (334)
Q Consensus 91 ~~~~~~~i~l~~~~~--~~-~~~~~v~~al~~-~----~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~ 162 (334)
...+..++|+-.|.- .. ...|++.+++.+ + .....|-.+-..++-++|+..+.-+-+.++++++++|+.++.
T Consensus 46 De~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANela 125 (442)
T KOG1404|consen 46 DEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELA 125 (442)
T ss_pred cCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHH
Confidence 445666777655532 12 246888887764 2 123556566678999999999976667799999999999998
Q ss_pred HHHhc--CCCCEEEEcCCCCh-hHHHHHHHCCCeEEEeeCC-----------CC-----CCCC---------HHHHHHhc
Q 019868 163 MRCVL--DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRK-----------SD-----FSLN---------VELIADAV 214 (334)
Q Consensus 163 ~~~l~--~~gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~~~-----------~~-----~~~d---------~~~l~~~l 214 (334)
++... ...-.++.-..+|. +....+..-|......+.+ .+ |+=+ .++++..+
T Consensus 126 l~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 126 LKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred HHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 87532 22234555555664 3333333323222221100 00 0001 13333333
Q ss_pred c---cCCceEEEEeCCCCccccCC-cH---HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhc
Q 019868 215 E---REKPKCIFLTSPNNPDGSII-ND---EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAG 286 (334)
Q Consensus 215 ~---~~~~~~i~l~~p~NPtG~~~-~~---~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~g 286 (334)
. .+.+.+++.......-|.+- +. +...++++. +.++|.||+...|...+ .+...+.++-+--+-|++|..|
T Consensus 206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~PDIvTmAKgiG 284 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVVPDIVTMAKGIG 284 (442)
T ss_pred HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCCccHHHHHhhcc
Confidence 2 23344555555555556654 33 444556665 99999999999998766 4444455565666789999998
Q ss_pred ccccchheeEcCHHHHHHHHHhcCC---CCCcHHHHHHHHHHhc
Q 019868 287 LAGLRVGYGAFPLSIIEYLWRAKQP---YNVSVAAEVAACAALQ 327 (334)
Q Consensus 287 l~G~R~G~l~~~~~~i~~l~~~~~~---~~~~~~~q~aa~~~L~ 327 (334)
.|..+|.++..+++.+.+.+.... |.-++++.+++.++|+
T Consensus 285 -nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~ 327 (442)
T KOG1404|consen 285 -NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLK 327 (442)
T ss_pred -CCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHH
Confidence 889999999999999998887744 5678888888888875
No 360
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.61 E-value=1.2e-06 Score=92.52 Aligned_cols=191 Identities=13% Similarity=0.100 Sum_probs=129.2
Q ss_pred cCCCCCCCCCCHHHHHHHhc-CcCC---CCC-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-c
Q 019868 100 IDANENPYGPPPEVREALGQ-LKFP---YIY-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-L 167 (334)
Q Consensus 100 l~~~~~~~~~~~~v~~al~~-~~~~---~~Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~ 167 (334)
++.|..+.-.|+.+.+++.+ .... .-| |. .| ..++++.++++.|++++++-++.|++++.+.++.++ .
T Consensus 108 iG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 108 IGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhc
Confidence 45556666677777666554 2221 334 33 23 457899999999999999999999999999888766 3
Q ss_pred CCC--CEEEEcCCCChhHHHHH----HHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 168 DPG--DKIVDCPPTFTMYEFDA----AVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 168 ~~g--d~Vl~~~p~y~~~~~~~----~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
.+| ++|++++-.|+.+...+ +..|++++.++.++. + ... +.+-.+++..|+ -+|.+.+.+++.
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~------~~~-~~v~~vlvq~P~-~~G~v~dv~~I~ 256 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D------YSS-GDVCGVLVQYPA-TDGEVLDYAEFV 256 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c------ccc-CceEEEEEecCC-CCeEEcCHHHHH
Confidence 444 78999999998765544 447999999885321 1 111 233345555555 499999999999
Q ss_pred HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhh---cccccchheeEcCHHHHHHH
Q 019868 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRA---GLAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~---gl~G~R~G~l~~~~~~i~~l 305 (334)
++++. ++++++ .+... .. .....+.+.+-++++++..|.. |..|.+.||+++.+++.+.+
T Consensus 257 ~~ah~~GaL~iV-aad~l-al--~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~ 320 (993)
T PLN02414 257 KNAHANGVKVVM-ATDLL-AL--TMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLM 320 (993)
T ss_pred HHHHHcCCEEEE-EECHH-Hh--cCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhC
Confidence 99987 888888 33221 11 1111133456679999988843 23467789999988876543
No 361
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.59 E-value=3.4e-06 Score=81.08 Aligned_cols=224 Identities=13% Similarity=0.105 Sum_probs=138.6
Q ss_pred eeecCCCCCCC-CCCHHHHHHHhcCcCCCCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC-CCCEE
Q 019868 97 IVKIDANENPY-GPPPEVREALGQLKFPYIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-PGDKI 173 (334)
Q Consensus 97 ~i~l~~~~~~~-~~~~~v~~al~~~~~~~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~-~gd~V 173 (334)
+|||-+ +.-. .+++++.+++..-+ ..| .++...+|++.+++++|.+ .++.|..+..+-..++..+++ +||++
T Consensus 43 ~IDLrS-DTgT~apS~~m~aAM~~GD--D~Y~gdpSv~~Lee~vael~G~E--~alpthqGRgaE~Il~~~~~~~~g~e~ 117 (467)
T TIGR02617 43 FIDLLT-DSGTGAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKREQEK 117 (467)
T ss_pred EEECcc-CCCCCCCCHHHHHHHHcCC--cccccCchHHHHHHHHHHHhCCc--eEEECCCCchHHHHHHHhhcccccccc
Confidence 488865 3344 37788888887622 347 5667899999999999964 578887778888888888888 78877
Q ss_pred EEcCC--------CChhHHHHHHHCCCeEEEeeC----------CCCCCCCHHHHHHhcccC---CceEEEEeCCCC-cc
Q 019868 174 VDCPP--------TFTMYEFDAAVNGAAVVKVPR----------KSDFSLNVELIADAVERE---KPKCIFLTSPNN-PD 231 (334)
Q Consensus 174 l~~~p--------~y~~~~~~~~~~G~~v~~v~~----------~~~~~~d~~~l~~~l~~~---~~~~i~l~~p~N-Pt 231 (334)
++..+ .|......+...|+.++.++. ..++.+|++++++++++. +.-.+...--+| --
T Consensus 118 g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~G 197 (467)
T TIGR02617 118 GLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAG 197 (467)
T ss_pred cccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCC
Confidence 75443 122233456678998887631 224689999999999742 222222221123 35
Q ss_pred ccCCcHHHHHHHHhC----CCeEEEccCCc----Cc------cCCCCchhhhc-C--CCcEEEEcCCchhhccc-ccchh
Q 019868 232 GSIINDEDLLKILEM----PILVVLDEAYT----EF------SGLESRMEWVK-K--HDNLIVLRTFSKRAGLA-GLRVG 293 (334)
Q Consensus 232 G~~~~~~~l~~l~~~----~~~lIvDeay~----~~------~~~~~~~~~~~-~--~~~~i~i~S~SK~~gl~-G~R~G 293 (334)
|++++.+.++++.+. |+.++.|.+=. .| .+.+.....+. + ..-+.+..|+||.+|.+ | |
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG---g 274 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG---G 274 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc---c
Confidence 889999999888765 99999997521 11 11112222111 0 12236677999988766 4 6
Q ss_pred eeEcCHH-HHHHHHHhcC---C-------CCCcHHHHHHHHHHhcC
Q 019868 294 YGAFPLS-IIEYLWRAKQ---P-------YNVSVAAEVAACAALQN 328 (334)
Q Consensus 294 ~l~~~~~-~i~~l~~~~~---~-------~~~~~~~q~aa~~~L~~ 328 (334)
+++++++ +.+.+.+.+. . -+.+.-...+....|++
T Consensus 275 ~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 275 LLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred eEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 6666543 3333333332 1 13555555555555543
No 362
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.49 E-value=4e-06 Score=82.53 Aligned_cols=232 Identities=16% Similarity=0.155 Sum_probs=134.7
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCCC-----CCCCcChHHHHHHHHHhcCCCC---CCEEEe-CCHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFPY-----IYPDPESRRLRAALAKDSGLES---DHILVG-CGADE 157 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~~-----~Yp~~g~~~lr~~lA~~~~~~~---~~I~~t-~G~~~ 157 (334)
..+++.++|+..|. ..++ .+|++.+++++ +.... .|+.+...+|-+.+.+.+.-.- +.++++ +++++
T Consensus 59 D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSE 138 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTD 138 (464)
T ss_pred eCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCcHH
Confidence 44678889986663 3344 46888888775 32111 2334344556666666654211 356664 68889
Q ss_pred HHHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCCC------------CCHHHH
Q 019868 158 LIDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDFS------------LNVELI 210 (334)
Q Consensus 158 ~i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~~------------~d~~~l 210 (334)
+...+++... ....+|+...-+|......+.. .| ..+..++....+. .+++.+
T Consensus 139 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 218 (464)
T PRK06938 139 AVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYL 218 (464)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHH
Confidence 9999888432 2236788777777654332222 11 0122333211111 135677
Q ss_pred HHhccc-----CCceEEEEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEE
Q 019868 211 ADAVER-----EKPKCIFLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVL 278 (334)
Q Consensus 211 ~~~l~~-----~~~~~i~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i 278 (334)
++.+.+ +++.+|++.-...--|.+. +.+.++++ ++. |+++|.||++.+|...+..... .+- ..++++
T Consensus 219 ~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~ 297 (464)
T PRK06938 219 ENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVV 297 (464)
T ss_pred HHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEE
Confidence 777752 1456777653344446654 46555554 444 9999999999988643322211 111 122333
Q ss_pred cCCchhhcccccchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~ 327 (334)
++|.+| .|+.+|.+++.+++ +.+.. ....|+.|+++.+++.+.|+
T Consensus 298 --~gKglg-gG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~ 344 (464)
T PRK06938 298 --LSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLR 344 (464)
T ss_pred --eecccc-CCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 699987 78999999988774 54421 22347788999888888875
No 363
>PLN02452 phosphoserine transaminase
Probab=98.48 E-value=3.3e-06 Score=80.54 Aligned_cols=192 Identities=16% Similarity=0.082 Sum_probs=124.3
Q ss_pred eeecCCCCCCCCCCHHHHHHHhc-C-c----------CCCCCCCcC--hHHHHHHHHHhcCCCCC-C-EEEeCCHHHHHH
Q 019868 97 IVKIDANENPYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLESD-H-ILVGCGADELID 160 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~~-~-~----------~~~~Yp~~g--~~~lr~~lA~~~~~~~~-~-I~~t~G~~~~i~ 160 (334)
++.|.. -|...|++|++++.. + + ..++-++.. ..+.++.|.++++++.+ + +++..|++.++.
T Consensus 8 ~~~f~p--GP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 8 VFNFSA--GPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFA 85 (365)
T ss_pred eEeeeC--CCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHH
Confidence 455543 355667888888764 2 1 223333321 56788888888997433 3 555789999999
Q ss_pred HHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCCC---CCCCHHHHHHhcccCCceEEEEeCCCCccccC-
Q 019868 161 LIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD---FSLNVELIADAVEREKPKCIFLTSPNNPDGSI- 234 (334)
Q Consensus 161 ~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~~---~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~- 234 (334)
.++..++.+|+++++...... -+...++.+|...+......+ ..+++++++. .++.+.|.+++-.-.||..
T Consensus 86 a~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnETstGv~~ 162 (365)
T PLN02452 86 AIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANETIHGVEF 162 (365)
T ss_pred HHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCCCCcEec
Confidence 999999999998877765443 244566777764444321111 1466776522 2467888888888899996
Q ss_pred CcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 235 INDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 235 ~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
.+.+++ . ++++|+|.+..-.... - .+.+.+ +...|..|.+|.+| +|++++++++++++.
T Consensus 163 ~~~~~i---~--~~~lvVDa~Ss~g~~p-i---dv~~~~--v~~~saqK~lGP~G--l~~v~vr~~~l~~~~ 221 (365)
T PLN02452 163 KDYPDV---G--NVPLVADMSSNFLSKP-V---DVSKYG--VIYAGAQKNVGPSG--VTIVIIRKDLIGNAR 221 (365)
T ss_pred Cccccc---C--CCeEEEECCccccCcc-c---CHHHcC--EEEEecccccCCCC--eEEEEEcHHHHhhcc
Confidence 443333 2 4789999987644321 1 112223 34469999999888 799999999887653
No 364
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.48 E-value=8.3e-06 Score=80.21 Aligned_cols=232 Identities=15% Similarity=0.197 Sum_probs=130.7
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhc-CcCC-----CCCCCcChHHHHHHHHHhcCCC-CC-CE-EEeCCHHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQ-LKFP-----YIYPDPESRRLRAALAKDSGLE-SD-HI-LVGCGADEL 158 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~-~~~~-----~~Yp~~g~~~lr~~lA~~~~~~-~~-~I-~~t~G~~~~ 158 (334)
..+++.+||+..+. ..++ ..|++.+++++ +... ..++.+...+|-+.+++..+-. .+ .+ +++++++++
T Consensus 54 D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEA 133 (459)
T PRK06931 54 DVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADA 133 (459)
T ss_pred eCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHH
Confidence 45678899997763 3334 46888888775 3211 1123333456667777666422 11 34 556888899
Q ss_pred HHHHHHHhc--CCCCEEEEcCCCChhHHHHHHH-CC------------CeEEEeeCCCCC----C----CCHHHH----H
Q 019868 159 IDLIMRCVL--DPGDKIVDCPPTFTMYEFDAAV-NG------------AAVVKVPRKSDF----S----LNVELI----A 211 (334)
Q Consensus 159 i~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~G------------~~v~~v~~~~~~----~----~d~~~l----~ 211 (334)
...+++... ....+|+...-.|......+.. .| ..+..+|..+.+ . -+.+.+ +
T Consensus 134 ve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06931 134 VEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFE 213 (459)
T ss_pred HHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHH
Confidence 998888432 2346788888778655443332 11 112233321111 1 022222 2
Q ss_pred Hhcc-----cCCceEEEEeCCCCccccCC-cHHHHHH---HHhC-CCeEEEccCCcCccCCCCchhh--hcCCCcEEEEc
Q 019868 212 DAVE-----REKPKCIFLTSPNNPDGSII-NDEDLLK---ILEM-PILVVLDEAYTEFSGLESRMEW--VKKHDNLIVLR 279 (334)
Q Consensus 212 ~~l~-----~~~~~~i~l~~p~NPtG~~~-~~~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~~--~~~~~~~i~i~ 279 (334)
+.+. .+++.+|++.-...-.|... +.+.+++ +++. ++++|.||+..+|...+..... .+- ..+++
T Consensus 214 ~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv-- 290 (459)
T PRK06931 214 NFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDII-- 290 (459)
T ss_pred HHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEE--
Confidence 2222 12466777764344456655 4544444 4554 9999999999988543322111 111 12233
Q ss_pred CCchhhcccccchheeEcCHHHHHHHHH--hcCCCCCcHHHHHHHHHHhc
Q 019868 280 TFSKRAGLAGLRVGYGAFPLSIIEYLWR--AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 280 S~SK~~gl~G~R~G~l~~~~~~i~~l~~--~~~~~~~~~~~q~aa~~~L~ 327 (334)
+++|.++ .|+.+|.+++.++ ++.+.. ....|+.|+++.+++.+.|+
T Consensus 291 t~gK~l~-gG~Pi~av~~~~~-~~~~~~~~~~~T~~gnpla~aaala~L~ 338 (459)
T PRK06931 291 VMSKAVG-GGLPLAVLGIKKE-FDAWQPGGHTGTFRGNQLAMATGLTTLK 338 (459)
T ss_pred Eeccccc-CCcceeeeeeHHH-HhhccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4799987 6889998777766 354432 22336789999888888875
No 365
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.46 E-value=3.7e-06 Score=76.66 Aligned_cols=163 Identities=14% Similarity=0.068 Sum_probs=118.9
Q ss_pred HHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc--CCCCEEEEcCC-CChh----HHHHHHHCCCeEEEeeCCCCCC
Q 019868 132 RRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL--DPGDKIVDCPP-TFTM----YEFDAAVNGAAVVKVPRKSDFS 204 (334)
Q Consensus 132 ~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~--~~gd~Vl~~~p-~y~~----~~~~~~~~G~~v~~v~~~~~~~ 204 (334)
..+-..+|.++|..+.+++++.+++-.+..++.+.+ .+|++||+++- +|+. ....+...|.. +. -...
T Consensus 79 ~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~--~~~~ 153 (407)
T COG3844 79 ERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YD--LEGV 153 (407)
T ss_pred hHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---cc--ceee
Confidence 457778888899999999999999999999988876 45888888764 4432 22334444432 11 1234
Q ss_pred CCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch
Q 019868 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (334)
Q Consensus 205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK 283 (334)
+.+++++++++ +++.+|++++.|.-||+.++...+.++++. +++++.|-+++-.. ....+...+..+-|++-.|
T Consensus 154 ~~P~~~~~~~~-dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~gaDfaigcsyK 228 (407)
T COG3844 154 IAPRALEEAIT-DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGA----VPVDLHAAGADFAIGCSYK 228 (407)
T ss_pred eChHHHHHhhc-cceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCC----cceeecccCCCeeeeeece
Confidence 56789999997 789999999999999999999999999988 99999999987433 2233345566688889999
Q ss_pred hhc-ccccchheeEcCHHHHHHH
Q 019868 284 RAG-LAGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 284 ~~g-l~G~R~G~l~~~~~~i~~l 305 (334)
.++ -|| -.+++.+.++..+..
T Consensus 229 YLNgGPG-apa~l~v~~~h~e~~ 250 (407)
T COG3844 229 YLNGGPG-APAGLFVAPRHRERS 250 (407)
T ss_pred eccCCCC-CceeEEecccccccc
Confidence 764 233 256677666555543
No 366
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.40 E-value=4.9e-06 Score=81.66 Aligned_cols=230 Identities=15% Similarity=0.128 Sum_probs=128.2
Q ss_pred CCCCCCeeecCCCC--CCCC-CCHHHHHHHhcC--c----CCCCCCCcChHHHHHHHHH----hcCCCCCCEEEeCCHHH
Q 019868 91 GRKPEDIVKIDANE--NPYG-PPPEVREALGQL--K----FPYIYPDPESRRLRAALAK----DSGLESDHILVGCGADE 157 (334)
Q Consensus 91 ~~~~~~~i~l~~~~--~~~~-~~~~v~~al~~~--~----~~~~Yp~~g~~~lr~~lA~----~~~~~~~~I~~t~G~~~ 157 (334)
..+++.++|+..+. ..++ .+|++.+++++. . ....|+.....++-+.+++ ...-+-+.+++++++++
T Consensus 54 D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsE 133 (464)
T TIGR00699 54 DVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSD 133 (464)
T ss_pred eCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHH
Confidence 45678899997763 3344 468888887651 1 1122333334456666544 33323368999999999
Q ss_pred HHHHHHHHhcC--------------------------CC---CEEEEcCCCChhHHHHHHH-CCCe-----------EEE
Q 019868 158 LIDLIMRCVLD--------------------------PG---DKIVDCPPTFTMYEFDAAV-NGAA-----------VVK 196 (334)
Q Consensus 158 ~i~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~-~G~~-----------v~~ 196 (334)
+.+.+++.... +| .+|+...-+|......+.. .|-. +..
T Consensus 134 AvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~ 213 (464)
T TIGR00699 134 ANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQ 213 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCcee
Confidence 99999885410 11 2688888888654433222 1211 111
Q ss_pred eeCCC-C--CC-----------CCHHHHHHhccc--CCceEEEEeCCCCccccCCc----HHHHHHHHhC-CCeEEEccC
Q 019868 197 VPRKS-D--FS-----------LNVELIADAVER--EKPKCIFLTSPNNPDGSIIN----DEDLLKILEM-PILVVLDEA 255 (334)
Q Consensus 197 v~~~~-~--~~-----------~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~-~~~lIvDea 255 (334)
+|... . +. -+++.+++.+++ .++.+|++.-.....|...+ .++++++++. |+++|+||+
T Consensus 214 ~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV 293 (464)
T TIGR00699 214 APFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEV 293 (464)
T ss_pred cCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeee
Confidence 22110 0 00 135566666642 35677777755666788886 5566666665 999999999
Q ss_pred CcCccCCCCchhh--hcCC-CcEEEEcCCchhhcccccchheeEcCHHHHHHHH--HhcCCCCCcHHHHHHHHHHhc
Q 019868 256 YTEFSGLESRMEW--VKKH-DNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW--RAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 256 y~~~~~~~~~~~~--~~~~-~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~--~~~~~~~~~~~~q~aa~~~L~ 327 (334)
+.+|...+..... .+-. ..++ -+++|.+|-. ||++..+ .+.... .....+..++++.+++.+.|+
T Consensus 294 ~tGfGrtG~~fa~e~~gv~~~PDi--~t~gK~lg~g----G~~~~~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~ 363 (464)
T TIGR00699 294 QTGVGATGKFWAHEHWNLDDPPDM--VTFSKKFQTA----GYFFHDP-AFRPNKPYRQFNTWMGDPSRALILREIIQ 363 (464)
T ss_pred eeCCCCCcchhHHHhcCCCCCCCE--EEehhhhccC----Cccccch-hccCCCCcccccCCCCCHHHHHHHHHHHH
Confidence 9887543322111 1110 1223 4589987523 4444432 211100 122336678888887776654
No 367
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.39 E-value=1.8e-05 Score=75.03 Aligned_cols=184 Identities=15% Similarity=0.042 Sum_probs=118.0
Q ss_pred CCCCCHHHHHHHhc-C-c----------CCCCCCCcC--hHHHHHHHHHhcCCCC-CCEEE-eCCHHHHHHHHHHHhcCC
Q 019868 106 PYGPPPEVREALGQ-L-K----------FPYIYPDPE--SRRLRAALAKDSGLES-DHILV-GCGADELIDLIMRCVLDP 169 (334)
Q Consensus 106 ~~~~~~~v~~al~~-~-~----------~~~~Yp~~g--~~~lr~~lA~~~~~~~-~~I~~-t~G~~~~i~~~~~~l~~~ 169 (334)
|-..|++|.+++++ + + ..++-+... ..+.++.+.++++++. .+|++ ..|++.++.++...|+.+
T Consensus 12 Pa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~ 91 (364)
T PRK12462 12 PGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRP 91 (364)
T ss_pred CcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCC
Confidence 34456788777663 2 1 112223321 4577777888889843 35655 556999999999999999
Q ss_pred CCEEE--EcCCCChh-HHHHHHHCCCeEEEeeC--C--CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHH
Q 019868 170 GDKIV--DCPPTFTM-YEFDAAVNGAAVVKVPR--K--SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLK 242 (334)
Q Consensus 170 gd~Vl--~~~p~y~~-~~~~~~~~G~~v~~v~~--~--~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~ 242 (334)
||+++ +..-.|.. +...++.+| ++..+.. . .+..++++.+. +. ++.+.|.+|+-.-.||..++ +
T Consensus 92 g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~-~d~~~v~~t~NETstGv~~~-----~ 162 (364)
T PRK12462 92 GAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAELD--WD-ARAPFRHYVSNETVEGLQFP-----D 162 (364)
T ss_pred CCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cC-CCCcEEEEccCCCCceEecC-----c
Confidence 99654 55555542 445566676 5544431 1 12345566652 22 35788888887889999986 2
Q ss_pred HHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH
Q 019868 243 ILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 243 l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
+.+. +.++|+|.+-.-+...- .++++ .++..|.-|++|.+| ++.++++++.+++..
T Consensus 163 ~~~~~~~llvvD~sS~~~s~pi----d~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~ 219 (364)
T PRK12462 163 AAGLPDSPLIADMSSDFMSRPF----DVEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVP 219 (364)
T ss_pred ccccCCCeEEEEcCchhhCCCC----ChHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhcc
Confidence 3333 78999999765433211 11222 588889999999777 678888988887544
No 368
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.33 E-value=2.2e-05 Score=79.15 Aligned_cols=89 Identities=16% Similarity=0.274 Sum_probs=73.2
Q ss_pred EEEEcCCCChhHHHHHHHCCC---eEEEeeCCCCCCCCHHHHHHhccc---CC--ceEEEEeCCCCccccCCcHHHHHHH
Q 019868 172 KIVDCPPTFTMYEFDAAVNGA---AVVKVPRKSDFSLNVELIADAVER---EK--PKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 172 ~Vl~~~p~y~~~~~~~~~~G~---~v~~v~~~~~~~~d~~~l~~~l~~---~~--~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
+++++.-.|.++...+...|+ .++.||.++++.+|+++|++.+++ .+ +-+|+.+-..-.+|.+=+.+++.+|
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l 303 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVAL 303 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHH
Confidence 588888889999999999998 589999888899999999998853 12 3345556778889999999999999
Q ss_pred Hh---C-CC--eEEEccCCcCcc
Q 019868 244 LE---M-PI--LVVLDEAYTEFS 260 (334)
Q Consensus 244 ~~---~-~~--~lIvDeay~~~~ 260 (334)
++ . ++ ++.+|.||+++.
T Consensus 304 ~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 304 RNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred HHHHHHcCCceeEeeeccccchh
Confidence 83 3 65 799999999863
No 369
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.21 E-value=1.4e-05 Score=76.89 Aligned_cols=189 Identities=16% Similarity=0.220 Sum_probs=108.6
Q ss_pred cCCCCCCCCCCHHHHH-HHhcCcCCCCC----C--CcC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc-
Q 019868 100 IDANENPYGPPPEVRE-ALGQLKFPYIY----P--DPE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL- 167 (334)
Q Consensus 100 l~~~~~~~~~~~~v~~-al~~~~~~~~Y----p--~~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~- 167 (334)
++.|....-.|+.+.+ .+.+-.....| | +.| ..++...++++.|.+..|.-+-.|+++....++.+..
T Consensus 70 iG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~ 149 (429)
T PF02347_consen 70 IGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRA 149 (429)
T ss_dssp --CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHH
T ss_pred ccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHh
Confidence 3455555556666666 34332332333 3 223 3478888999999876666777788777776655432
Q ss_pred --CCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHH
Q 019868 168 --DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLL 241 (334)
Q Consensus 168 --~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~ 241 (334)
+++++|+++.-.|+.+....+. .|.+++.++.+++...| .+++.+|++.+||. .|.+-+.+++.
T Consensus 150 ~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d---------~~~~a~v~vq~Pn~-~G~~ed~~~i~ 219 (429)
T PF02347_consen 150 TKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD---------DDDTAAVMVQNPNT-FGVFEDIKEIA 219 (429)
T ss_dssp HTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB----------STTEEEEEEESS-T-TSB--THHHHH
T ss_pred cccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc---------ccCeEEEEeecCCC-CceEeeHHHHH
Confidence 3346999999999988875443 79999999865554555 36899999999986 89999999999
Q ss_pred HHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHH
Q 019868 242 KILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIE 303 (334)
Q Consensus 242 ~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~ 303 (334)
++++. +.++++ . .+...- ..+....+.+-+|+++. +|.||.| |-.+|++.+.+++++
T Consensus 220 ~~~h~~gal~~~-~--ad~~aL-~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r 281 (429)
T PF02347_consen 220 DIAHAAGALVIV-G--ADPNAL-GGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVR 281 (429)
T ss_dssp HHHHHTT-EEEE-C--GGCCGC-CTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGG
T ss_pred HHHHHcCCEEEE-e--cCHHHH-hCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhh
Confidence 99886 777765 2 221110 11222234455677776 8877654 667888888776555
No 370
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.18 E-value=2.5e-05 Score=73.90 Aligned_cols=177 Identities=15% Similarity=0.084 Sum_probs=108.0
Q ss_pred cCCCCC-CCc---ChHHHHHHHHHhc----CCCCCCEEEeCCHHH---HHHHHHHHhcCCC----CEEEEcCCCChhHHH
Q 019868 121 KFPYIY-PDP---ESRRLRAALAKDS----GLESDHILVGCGADE---LIDLIMRCVLDPG----DKIVDCPPTFTMYEF 185 (334)
Q Consensus 121 ~~~~~Y-p~~---g~~~lr~~lA~~~----~~~~~~I~~t~G~~~---~i~~~~~~l~~~g----d~Vl~~~p~y~~~~~ 185 (334)
...+-| |.. |..++-..|.+|+ |.+.-.+....|++. ++..+-......| +.+++|+..|+....
T Consensus 93 ~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA 172 (496)
T COG1003 93 ANIHPFQPEEQVQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA 172 (496)
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh
Confidence 334555 432 4445544555554 554433444455543 3322222222333 689999999999998
Q ss_pred HHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC-CcHHHHHHHHhC-CCeEEEccCCcCccCCC
Q 019868 186 DAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLE 263 (334)
Q Consensus 186 ~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~-~~~lIvDeay~~~~~~~ 263 (334)
.+.+.|.+|+.|+.++++.+|+++|++++. +++.++.|++||- .|.. -+..++.+|++. |..|..|.+-..-.-+-
T Consensus 173 SAam~G~~VV~V~~~~~G~VDlddLk~k~~-~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~ 250 (496)
T COG1003 173 SAAMAGFKVVVVKCDENGNVDLDDLRAKAE-DNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGL 250 (496)
T ss_pred hHhhcCceEEEEecCCCCCccHHHHHHHhc-cceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhcc
Confidence 999999999999998899999999999998 7899999999974 4443 133444444444 89999998764322111
Q ss_pred CchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHH
Q 019868 264 SRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSII 302 (334)
Q Consensus 264 ~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i 302 (334)
... ++-+-+++=--+.|+|..| |-..|=+.+...++
T Consensus 251 ~rP---Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~ 290 (496)
T COG1003 251 ARP---GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLA 290 (496)
T ss_pred ccc---cccccceEEeecccccccCCCCCCCCCCceehHhhcc
Confidence 111 1222234444577777443 45555555444433
No 371
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.15 E-value=0.00016 Score=70.92 Aligned_cols=227 Identities=15% Similarity=0.132 Sum_probs=125.6
Q ss_pred CCCCeeecCCC--CCCCC-CCHHHHH--HHhc-Cc-----CC--CCCCCcChHHHHHHHHHhc-CCCCCCEEEeCCHHHH
Q 019868 93 KPEDIVKIDAN--ENPYG-PPPEVRE--ALGQ-LK-----FP--YIYPDPESRRLRAALAKDS-GLESDHILVGCGADEL 158 (334)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~~--al~~-~~-----~~--~~Yp~~g~~~lr~~lA~~~-~~~~~~I~~t~G~~~~ 158 (334)
+++.++|+..+ ...++ ..|++.+ ++++ +. .. ..|+.....+|-+.|++.. .-..+.|+++++++++
T Consensus 43 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEA 122 (443)
T PRK08297 43 TGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALA 122 (443)
T ss_pred CCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHH
Confidence 57778888665 33344 4577777 7664 21 11 1234444556777777765 2234689999999999
Q ss_pred HHHHHHHhc--------CCC------CEEEEcCCCChhHHHHHHH-CCCeE-----------EEeeCCC-CC-----C--
Q 019868 159 IDLIMRCVL--------DPG------DKIVDCPPTFTMYEFDAAV-NGAAV-----------VKVPRKS-DF-----S-- 204 (334)
Q Consensus 159 i~~~~~~l~--------~~g------d~Vl~~~p~y~~~~~~~~~-~G~~v-----------~~v~~~~-~~-----~-- 204 (334)
+..+++... ..| .+|+...-+|......+.. .|... ..++... .+ .
T Consensus 123 ve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK08297 123 VENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLE 202 (443)
T ss_pred HHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccc
Confidence 999998541 012 5788888888655433332 22110 0011000 00 0
Q ss_pred -C------CHHHHHHhccc--CCceEEEEeCCCCccccC-CcHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh--h
Q 019868 205 -L------NVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME--W 268 (334)
Q Consensus 205 -~------d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~--~ 268 (334)
. +++.+++.+.+ +++.+|++.-....-|.. .+.+.+++| ++. |+++|.||++.+|...+.... .
T Consensus 203 ~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~ 282 (443)
T PRK08297 203 EVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQ 282 (443)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHh
Confidence 0 23445555542 456777776444445654 456655555 444 999999999998754332211 1
Q ss_pred hcCCCcEEEEcCCchhhcccccchheeEcCHHHHHHHH-------HhcCCCCCcHHHHHHHHHHhc
Q 019868 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLW-------RAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 269 ~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~-------~~~~~~~~~~~~q~aa~~~L~ 327 (334)
.+- ..+++ +|+|.++ +|.+++.+++.+.+. .....++.++++.+++.++|+
T Consensus 283 ~gv-~PDiv--~~gK~l~-----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 340 (443)
T PRK08297 283 LGV-RPDIV--AFGKKTQ-----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILE 340 (443)
T ss_pred cCC-CCCEE--Eeccccc-----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHH
Confidence 111 22244 4899764 334444444332221 122346788999888888876
No 372
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.14 E-value=9.6e-05 Score=77.14 Aligned_cols=229 Identities=13% Similarity=0.145 Sum_probs=131.7
Q ss_pred CeeecCCC--CCCCC--CCHHHHHHHhc-CcC-CCC----CCCcChHHHHHHHHHhcCCC-CCCEEEeCCHHHHHHHHHH
Q 019868 96 DIVKIDAN--ENPYG--PPPEVREALGQ-LKF-PYI----YPDPESRRLRAALAKDSGLE-SDHILVGCGADELIDLIMR 164 (334)
Q Consensus 96 ~~i~l~~~--~~~~~--~~~~v~~al~~-~~~-~~~----Yp~~g~~~lr~~lA~~~~~~-~~~I~~t~G~~~~i~~~~~ 164 (334)
.++|+..+ ...++ ..|++.+++.+ +.. .+. |......+|-+.|++..+-+ -+.|+++++++++++.+++
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlK 445 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALK 445 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHH
Confidence 56776554 23343 47889888875 322 111 12222345666666633311 3589999999999999887
Q ss_pred HhcC---------------------CCCEEEEcCCCChhHHHHHHHCCC---------eE------EEeeCC--------
Q 019868 165 CVLD---------------------PGDKIVDCPPTFTMYEFDAAVNGA---------AV------VKVPRK-------- 200 (334)
Q Consensus 165 ~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~G~---------~v------~~v~~~-------- 200 (334)
.-.+ ...+|+...-+|..-...+...+. .. ..++..
T Consensus 446 mA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~ 525 (817)
T PLN02974 446 MAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGR 525 (817)
T ss_pred HHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcccccccc
Confidence 4421 124688888777543222222111 00 011100
Q ss_pred ------CC-----------CC-----CC------------HHHHHHhccc-------CCceEEEEeC-CCCccccCC-cH
Q 019868 201 ------SD-----------FS-----LN------------VELIADAVER-------EKPKCIFLTS-PNNPDGSII-ND 237 (334)
Q Consensus 201 ------~~-----------~~-----~d------------~~~l~~~l~~-------~~~~~i~l~~-p~NPtG~~~-~~ 237 (334)
.. |. +| .+.+++.+++ +++.+|++.- ...--|.+. +.
T Consensus 526 ~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~ 605 (817)
T PLN02974 526 WNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDP 605 (817)
T ss_pred ccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCH
Confidence 00 00 00 2445555531 3456677664 256667776 45
Q ss_pred HHHHH---HHhC-CCeEEEccCCcCccCCCCchhhh-cCCCcEEEEcCCchhhcccc-cchheeEcCHHHHHHHHH----
Q 019868 238 EDLLK---ILEM-PILVVLDEAYTEFSGLESRMEWV-KKHDNLIVLRTFSKRAGLAG-LRVGYGAFPLSIIEYLWR---- 307 (334)
Q Consensus 238 ~~l~~---l~~~-~~~lIvDeay~~~~~~~~~~~~~-~~~~~~i~i~S~SK~~gl~G-~R~G~l~~~~~~i~~l~~---- 307 (334)
+.+++ +++. |+++|.||++.+|...+.....- ..-..++++ ++|.++ .| +.+|.+++.+++.+.+..
T Consensus 606 ~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~--~gKgLt-gG~~Plaa~l~~~~I~~~f~~~~~~ 682 (817)
T PLN02974 606 LFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIAC--YAKLLT-GGLVPLAATLATEEVFEAFRGPSKL 682 (817)
T ss_pred HHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEe--eccccc-CCCCccEEEEEcHHHHHhhcccccc
Confidence 55444 4544 99999999999987544322210 011223443 899887 78 589999999999998752
Q ss_pred ----hcCCCCCcHHHHHHHHHHhc
Q 019868 308 ----AKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 308 ----~~~~~~~~~~~q~aa~~~L~ 327 (334)
....|+.++++.+++.+.|+
T Consensus 683 ~~~~hg~Ty~gnpl~cAaala~L~ 706 (817)
T PLN02974 683 DALLHGHSYTAHPMGCAAAAKALQ 706 (817)
T ss_pred CCcccCCCCCcCHHHHHHHHHHHH
Confidence 22347889999999877764
No 373
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.14 E-value=8.9e-05 Score=71.55 Aligned_cols=233 Identities=17% Similarity=0.148 Sum_probs=138.2
Q ss_pred CCCCeeecCCC--CCCCC-CCHHHHHHHhc-C---cCCCCC--CCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHHHHHH
Q 019868 93 KPEDIVKIDAN--ENPYG-PPPEVREALGQ-L---KFPYIY--PDPESRRLRAALAKDSG-LESDHILVGCGADELIDLI 162 (334)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~---~~~~~Y--p~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~i~~~ 162 (334)
+++.++|--.+ .+.++ ..+++.+|+++ + .+.+.+ ......+|-+.|++..+ -+-++|++++|++++++.+
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtA 121 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETA 121 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHH
Confidence 45556664333 12222 34778787765 2 222111 11126788888888887 4467999999999999999
Q ss_pred HHHhc-------CCC-CEEEEcCCCChhHHHHHHH-CC-------------CeEEEeeCCC--------CCC----CCHH
Q 019868 163 MRCVL-------DPG-DKIVDCPPTFTMYEFDAAV-NG-------------AAVVKVPRKS--------DFS----LNVE 208 (334)
Q Consensus 163 ~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~G-------------~~v~~v~~~~--------~~~----~d~~ 208 (334)
++... +|. .+++.-...|..-...+.. .| ..+..++... .+. -..+
T Consensus 122 lKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~ 201 (449)
T COG0161 122 LKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAAD 201 (449)
T ss_pred HHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHH
Confidence 88542 232 3477777777533222211 11 1122222111 111 1256
Q ss_pred HHHHhccc---CCceEEEEeCCC-CccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcC-CCcEEEE
Q 019868 209 LIADAVER---EKPKCIFLTSPN-NPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKK-HDNLIVL 278 (334)
Q Consensus 209 ~l~~~l~~---~~~~~i~l~~p~-NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~-~~~~i~i 278 (334)
+|++.+.. +++-++++.-.. --.|..++. +++++||+. ++++|.||+-.+|...+.....-.. -..+++
T Consensus 202 ~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~- 280 (449)
T COG0161 202 ELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDIL- 280 (449)
T ss_pred HHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCee-
Confidence 67777654 345566665333 337776653 455667776 9999999999998865554332111 112233
Q ss_pred cCCchhhcccccchheeEcCHHHHHHHHHh-c------CCCCCcHHHHHHHHHHhc
Q 019868 279 RTFSKRAGLAGLRVGYGAFPLSIIEYLWRA-K------QPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 279 ~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~-~------~~~~~~~~~q~aa~~~L~ 327 (334)
+++|.+.-.=+.+|.+++.+++.+.+..- . ..|+-++++.+++.+.|+
T Consensus 281 -~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~ 335 (449)
T COG0161 281 -CLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLD 335 (449)
T ss_pred -eecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHH
Confidence 47997652236777778899999988764 1 126789999999888664
No 374
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.12 E-value=2.4e-05 Score=72.96 Aligned_cols=200 Identities=17% Similarity=0.122 Sum_probs=130.3
Q ss_pred CCCCeeecCCC-CCCCCCCHHHHHHH----hcCcC----CCC-CCCc-ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 93 KPEDIVKIDAN-ENPYGPPPEVREAL----GQLKF----PYI-YPDP-ESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 93 ~~~~~i~l~~~-~~~~~~~~~v~~al----~~~~~----~~~-Yp~~-g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
+++++++|... -..+...+++.+.. ++... ..+ |.+. -..++.+.||+++|++ +.|+...|- .++..
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E-~aivYs~gF-~ti~S 169 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTE-DAIVYSYGF-STIES 169 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCc-ceeeecccc-chhhh
Confidence 35677777654 33555666666543 33211 122 4443 3568999999999964 567776665 57777
Q ss_pred HHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccC-----------C-ceEEEEeCCCC
Q 019868 162 IMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVERE-----------K-PKCIFLTSPNN 229 (334)
Q Consensus 162 ~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~-----------~-~~~i~l~~p~N 229 (334)
++.++++.||.|.+.+-.........+...-+++.+... |.+++++.+.+. . -+.|++..-.-
T Consensus 170 ~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~ 244 (467)
T KOG1358|consen 170 AIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYA 244 (467)
T ss_pred cchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccceEEEEEEeecc
Confidence 888899999999988766655555555555566666532 556666554311 1 23455557777
Q ss_pred ccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCC--Cc-h--hhhcCCCcEEEEcCCchhhcccccchheeEcCHHHH
Q 019868 230 PDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLE--SR-M--EWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLSII 302 (334)
Q Consensus 230 PtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~--~~-~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~~i 302 (334)
+||.+.+..++.++... ...+|+||.|+...-+. .. . ..++..+-.++++|+.-+++-.| ||.++..-++
T Consensus 245 N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G---gFc~G~~~i~ 320 (467)
T KOG1358|consen 245 NTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG---GFCAGKSFIA 320 (467)
T ss_pred CCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC---ceeecceeeE
Confidence 89999999999999887 89999999997644221 11 0 11122355689999988877556 7877744443
No 375
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.08 E-value=0.00012 Score=76.85 Aligned_cols=190 Identities=17% Similarity=0.144 Sum_probs=126.8
Q ss_pred ecCCCCCCCCCCHHHHHHHhcC-cCCCC---C-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868 99 KIDANENPYGPPPEVREALGQL-KFPYI---Y-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 99 ~l~~~~~~~~~~~~v~~al~~~-~~~~~---Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~ 167 (334)
-++.|..+.-.|+.+.+.+.+. ..... | |. .| .-++++.++++.|.+..|.-+..+++++.+.++.+..
T Consensus 68 fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~ 147 (939)
T TIGR00461 68 YIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFN 147 (939)
T ss_pred cCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHH
Confidence 3466666676788887555432 21223 3 22 23 2478889999999998898898999998887776642
Q ss_pred ---CCCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHH
Q 019868 168 ---DPGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDL 240 (334)
Q Consensus 168 ---~~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l 240 (334)
+++++|++++-.|+.+....+ ..|.+++.++ ++++++.+ ++.++++.+||. .|.+.+.+++
T Consensus 148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~---~~~~v~~q~Pn~-~G~ied~~~i 215 (939)
T TIGR00461 148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV---DVFGCLLQYPAT-DGSILDYKQL 215 (939)
T ss_pred hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC---CEEEEEEECCCC-CeEEecHHHH
Confidence 234899999999987775444 5899988873 44565554 467888888875 8999999999
Q ss_pred HHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc----cccchheeEcCHHHHHHH
Q 019868 241 LKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIEYL 305 (334)
Q Consensus 241 ~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl----~G~R~G~l~~~~~~i~~l 305 (334)
.++++. +.+++++---.-+. ......+.+-+|++++ +|.||+ .|...|++.+.+++.+.+
T Consensus 216 ~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaDi~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~l 280 (939)
T TIGR00461 216 IDALHSHKSLVSVAADLMALT----LLTPPGHYGADIVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKM 280 (939)
T ss_pred HHHHHHcCCEEEEEechHHhC----CcCCHHHcCCcEEeeC-CCccCCCCCCCCCceeeeeecHhhHhhC
Confidence 888877 88888743221111 1122234455577654 344654 266688888877766643
No 376
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.93 E-value=0.0004 Score=65.43 Aligned_cols=240 Identities=18% Similarity=0.229 Sum_probs=145.0
Q ss_pred hCCCCCCeeecCCC--CCCCC-CCHHHHHHHhc-Cc-CC---CCCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHHHH
Q 019868 90 LGRKPEDIVKIDAN--ENPYG-PPPEVREALGQ-LK-FP---YIYPDPESRRLRAALAKDSG-LESDHILVGCGADELID 160 (334)
Q Consensus 90 ~~~~~~~~i~l~~~--~~~~~-~~~~v~~al~~-~~-~~---~~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~i~ 160 (334)
+...++++||+..+ ..-++ ..|++.+++.+ +. .. ..|-.-..-++.+.+.+.++ -..+.|++.+++++|..
T Consensus 51 ~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne 130 (433)
T KOG1401|consen 51 FDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANE 130 (433)
T ss_pred ecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHH
Confidence 34456788998654 22222 36888888765 22 21 22211124456666666653 25689999999999999
Q ss_pred HHHHHhcC---CC---C--EEEEcCCCChhHHHH-HHHCCCeEEEeeCC---CC----CCCCHHHHHHhcccCC--ceEE
Q 019868 161 LIMRCVLD---PG---D--KIVDCPPTFTMYEFD-AAVNGAAVVKVPRK---SD----FSLNVELIADAVEREK--PKCI 222 (334)
Q Consensus 161 ~~~~~l~~---~g---d--~Vl~~~p~y~~~~~~-~~~~G~~v~~v~~~---~~----~~~d~~~l~~~l~~~~--~~~i 222 (334)
.+++.-.+ .+ + +|+....+|..-..- +...+......|.+ .+ --=|+.++++.++.++ +.+|
T Consensus 131 ~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~~IaAV 210 (433)
T KOG1401|consen 131 TALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKGEIAAV 210 (433)
T ss_pred HHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCCceEEE
Confidence 99885321 11 2 477777777543322 22222222222210 01 0115788888886543 6788
Q ss_pred EEeCCCCccccCC-cHHHHHHH---HhC-CCeEEEccCCcCccCCCCch--hhhcCCCcEEEEcCCchhhcccccchhee
Q 019868 223 FLTSPNNPDGSII-NDEDLLKI---LEM-PILVVLDEAYTEFSGLESRM--EWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (334)
Q Consensus 223 ~l~~p~NPtG~~~-~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~--~~~~~~~~~i~i~S~SK~~gl~G~R~G~l 295 (334)
|+.--.---|... +++.+..| ++. ++++|.||++.+|...+... ..+.- .--+.++.|.++ .|+.+|..
T Consensus 211 IvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~---~PDI~t~aK~L~-gGlPigA~ 286 (433)
T KOG1401|consen 211 IVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV---TPDITTVAKPLG-GGLPIGAT 286 (433)
T ss_pred EEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc---CCcceeehhhcc-CCceeEEE
Confidence 8775555566655 45555444 444 99999999999876433211 11111 122446899987 88999999
Q ss_pred EcCHHHHHHHHHhcC-----CCCCcHHHHHHHHHHhc---Cchhhc
Q 019868 296 AFPLSIIEYLWRAKQ-----PYNVSVAAEVAACAALQ---NPIYLE 333 (334)
Q Consensus 296 ~~~~~~i~~l~~~~~-----~~~~~~~~q~aa~~~L~---~~~~~~ 333 (334)
++++++.+.+..-.. .|+-|+++..++...|+ ++++++
T Consensus 287 ~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k 332 (433)
T KOG1401|consen 287 GVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLK 332 (433)
T ss_pred eehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHH
Confidence 999999998764333 37889998888877664 465543
No 377
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.92 E-value=0.00065 Score=66.40 Aligned_cols=228 Identities=14% Similarity=0.129 Sum_probs=121.5
Q ss_pred CCCCeeecCCC--CCCCC-CCHHHH--HHHhc-CcCC------C-CCCCcChHHHHHHHHHhcC-CCCCCEEEeCCHHHH
Q 019868 93 KPEDIVKIDAN--ENPYG-PPPEVR--EALGQ-LKFP------Y-IYPDPESRRLRAALAKDSG-LESDHILVGCGADEL 158 (334)
Q Consensus 93 ~~~~~i~l~~~--~~~~~-~~~~v~--~al~~-~~~~------~-~Yp~~g~~~lr~~lA~~~~-~~~~~I~~t~G~~~~ 158 (334)
+++.+||+..+ ...++ ..|++. +++.+ +... . .+......++-+.|++..+ -..+.++++++++++
T Consensus 36 dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEA 115 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALA 115 (431)
T ss_pred CCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHH
Confidence 67778888665 33344 457776 66654 2211 1 1222223455555666542 234689999999999
Q ss_pred HHHHHHHhc----------C----CCCEEEEcCCCChhHHHHHH-HCCCe-EE----------E--eeC-----C-CCCC
Q 019868 159 IDLIMRCVL----------D----PGDKIVDCPPTFTMYEFDAA-VNGAA-VV----------K--VPR-----K-SDFS 204 (334)
Q Consensus 159 i~~~~~~l~----------~----~gd~Vl~~~p~y~~~~~~~~-~~G~~-v~----------~--v~~-----~-~~~~ 204 (334)
+..+++.-. + ++.+|+...-+|......+. ..|.. .. . .|. . ++..
T Consensus 116 ve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 195 (431)
T TIGR03251 116 VENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLD 195 (431)
T ss_pred HHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccc
Confidence 999988442 0 13678888887865443322 22211 00 0 110 0 0000
Q ss_pred -------CCHHHHHHhcc--cCCceEEEEeCCCCccccCC-cHHHHHHHHh---C-CCeEEEccCCcCccCCCCchh--h
Q 019868 205 -------LNVELIADAVE--REKPKCIFLTSPNNPDGSII-NDEDLLKILE---M-PILVVLDEAYTEFSGLESRME--W 268 (334)
Q Consensus 205 -------~d~~~l~~~l~--~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~---~-~~~lIvDeay~~~~~~~~~~~--~ 268 (334)
-+++++++.+. ..++.+|++.-...-.|... +.+.+++|.+ . |+++|+||++.+|...+.... .
T Consensus 196 ~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~ 275 (431)
T TIGR03251 196 QVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQ 275 (431)
T ss_pred hhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHh
Confidence 12344455553 24677888775555567654 5555555544 4 999999999998764332211 1
Q ss_pred hcCCCcEEEEcCCchhhcccccchheeEcCH--HHHHHHH----HhcCCCCCcHHHHHHHHHHhc
Q 019868 269 VKKHDNLIVLRTFSKRAGLAGLRVGYGAFPL--SIIEYLW----RAKQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 269 ~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~--~~i~~l~----~~~~~~~~~~~~q~aa~~~L~ 327 (334)
.+- ...++ +++|.+ +. .|++...+ ++.+... .....++.++++.+++.++|+
T Consensus 276 ~gv-~PDi~--~~gK~~--~~--~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (431)
T TIGR03251 276 LGV-QPDIV--AFGKKT--QV--CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILE 333 (431)
T ss_pred cCC-CCCEE--EecccC--cc--ceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHH
Confidence 111 22244 378975 22 24444332 2222111 122336778888888887775
No 378
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=97.89 E-value=1.3e-05 Score=75.03 Aligned_cols=187 Identities=17% Similarity=0.132 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC---h---hHHHHHHHCCCeEEEeeCCCCCCCC
Q 019868 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF---T---MYEFDAAVNGAAVVKVPRKSDFSLN 206 (334)
Q Consensus 133 ~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y---~---~~~~~~~~~G~~v~~v~~~~~~~~d 206 (334)
.+.+.++++.|. +.-+++++...++.+++.++. +|.+|++..-.- + ......+..|++++.|-..+ .-.
T Consensus 51 ~v~~ll~~ltgA--eaA~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGttN--~t~ 125 (367)
T PF03841_consen 51 HVEELLCELTGA--EAALVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTTN--RTH 125 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccc--ccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc--ccc
Confidence 455556666664 466777777788888888765 566777665322 1 14456677899999887432 345
Q ss_pred HHHHHHhcccCCceEEEEeCCCCcc--c--cCCcHHHHHHHHhC-CCeEEEccCCcCccC-------CCCchhhhcCCCc
Q 019868 207 VELIADAVEREKPKCIFLTSPNNPD--G--SIINDEDLLKILEM-PILVVLDEAYTEFSG-------LESRMEWVKKHDN 274 (334)
Q Consensus 207 ~~~l~~~l~~~~~~~i~l~~p~NPt--G--~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-------~~~~~~~~~~~~~ 274 (334)
++++++++. +++.+++-.+++|-. | ...+.+++.++++. ++++|+|-.-..+.+ .++.....-..+-
T Consensus 126 ~~Dye~AI~-e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~Ga 204 (367)
T PF03841_consen 126 LSDYEKAIT-ENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGA 204 (367)
T ss_dssp ------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-
T ss_pred ccccccccc-ccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCC
Confidence 788999997 788888777776653 2 14588999999987 999999987633221 1122222223456
Q ss_pred EEEEcCCchhhcccccchheeEcCHHHHHHHHHhcC--CCCCcHHHHHHHHHHhc
Q 019868 275 LIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQ--PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 275 ~i~i~S~SK~~gl~G~R~G~l~~~~~~i~~l~~~~~--~~~~~~~~q~aa~~~L~ 327 (334)
++++.|-.|.+| |...|.+++.+++|+++++..- .+-+.....++..+.|+
T Consensus 205 DlV~fSGdKlLG--GPQaGiI~Gkk~lI~~lk~~pl~RalrvdK~tla~L~atL~ 257 (367)
T PF03841_consen 205 DLVTFSGDKLLG--GPQAGIIVGKKELIEKLKKHPLGRALRVDKLTLAALEATLR 257 (367)
T ss_dssp SEEEEETTSSSS--S-S-EEEEEEHHHHHHHHHHHHTTT-B--HHHHHHHHHHHH
T ss_pred CEEEEECCCcCC--CCCeEEEEeCHHHHHHHhhCCCcceEeeCHHHHHHHHHHHH
Confidence 799999999876 7789999999999999876432 35667666666666554
No 379
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.79 E-value=0.00018 Score=65.85 Aligned_cols=226 Identities=15% Similarity=0.150 Sum_probs=137.1
Q ss_pred hCCCCCCeeecCCCCCC---CCCCHHHHHHHhcC-cC----CCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHH
Q 019868 90 LGRKPEDIVKIDANENP---YGPPPEVREALGQL-KF----PYIYPDPESRRLRAALAKDSGLESDHILVGCGADELIDL 161 (334)
Q Consensus 90 ~~~~~~~~i~l~~~~~~---~~~~~~v~~al~~~-~~----~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~ 161 (334)
+..++...+||=.+... --..|.+.+++++. +. .+.+-+.-..++.+-+.++++.+ -|+.++-+.|+...
T Consensus 54 wD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf~~~--kvlpmnTGaEa~Et 131 (427)
T KOG1402|consen 54 WDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLFGYD--KVLPMNTGAEAVET 131 (427)
T ss_pred ECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhcCcc--eeeecccchhHHHH
Confidence 34456667776444322 23568899998763 21 11122233567888888888854 57777766888888
Q ss_pred HHHHhc------C--C-CCE-EEEcCCCChhHHHH----------HHHCC----CeEEEeeCCCCCCCCHHHHHHhcccC
Q 019868 162 IMRCVL------D--P-GDK-IVDCPPTFTMYEFD----------AAVNG----AAVVKVPRKSDFSLNVELIADAVERE 217 (334)
Q Consensus 162 ~~~~l~------~--~-gd~-Vl~~~p~y~~~~~~----------~~~~G----~~v~~v~~~~~~~~d~~~l~~~l~~~ 217 (334)
+++... + | ... |+.....|..-... .+.+| ..+..+|. =|.++++.+++.+
T Consensus 132 a~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y-----~d~eale~~l~~~ 206 (427)
T KOG1402|consen 132 ACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPY-----GDAEALEVALKSP 206 (427)
T ss_pred HHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeecc-----CCHHHHHHHhcCC
Confidence 877321 1 3 223 33333333211100 00011 01112221 1689999999877
Q ss_pred CceEEEEeCCCCccccCCcH----HHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCc---EEEEcCCchhhcccc
Q 019868 218 KPKCIFLTSPNNPDGSIIND----EDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN---LIVLRTFSKRAGLAG 289 (334)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~----~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~---~i~i~S~SK~~gl~G 289 (334)
+..++++.--+-.-|.+.+. +..++||.. ++++|.||++.++...+..+.. +++| .+++ |.|+++ .|
T Consensus 207 ~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~--d~env~PDivi--lgKalS-GG 281 (427)
T KOG1402|consen 207 NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLAC--DYENVRPDIVI--LGKALS-GG 281 (427)
T ss_pred CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEe--ehhhcCCCeEE--Eecccc-CC
Confidence 77888877667888887764 455667766 9999999999988765543322 2222 2444 789876 33
Q ss_pred -cchheeEcCHHHHHHHHHh--cCCCCCcHHHHHHHHHHhc
Q 019868 290 -LRVGYGAFPLSIIEYLWRA--KQPYNVSVAAEVAACAALQ 327 (334)
Q Consensus 290 -~R~G~l~~~~~~i~~l~~~--~~~~~~~~~~q~aa~~~L~ 327 (334)
+.+..+++++++...+..- ...|.-|+++.+++.++|+
T Consensus 282 ~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAale 322 (427)
T KOG1402|consen 282 VYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALE 322 (427)
T ss_pred eeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHH
Confidence 5667777888887765432 2347889999999988885
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.73 E-value=0.0022 Score=60.87 Aligned_cols=193 Identities=15% Similarity=0.109 Sum_probs=129.3
Q ss_pred ecCCCCCCCCCCHHHH-HHHhcCcCCCCC----CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868 99 KIDANENPYGPPPEVR-EALGQLKFPYIY----PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 99 ~l~~~~~~~~~~~~v~-~al~~~~~~~~Y----p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~ 167 (334)
-++.|..+.-.|+.+. ..+.+-.....| |. .| .-++...++++.|.+-.|--+--|+|.+-+..+.+..
T Consensus 79 fiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r 158 (450)
T COG0403 79 FIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAEAMLMAKR 158 (450)
T ss_pred hccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHH
Confidence 4566777777777776 445543332334 32 23 2367888889999887777777888877777766553
Q ss_pred ---CCCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccc-cCCcHHH
Q 019868 168 ---DPGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDG-SIINDED 239 (334)
Q Consensus 168 ---~~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG-~~~~~~~ 239 (334)
.+..+++++.-.|+.+....+- .|.+++.++.+ |++++++. ....+-++++..|+ -.| ...+...
T Consensus 159 ~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~-~~~~~~gv~vQyP~-~~G~~~~d~~~ 231 (450)
T COG0403 159 VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESA-DDGDVFGVLVQYPN-TFGIVEEDLRA 231 (450)
T ss_pred hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhc-cccCeEEEEEecCC-CCCccchhHHH
Confidence 2358999999999988776654 56777777643 77888887 54578899999998 477 5556888
Q ss_pred HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcc----cccchheeEcCHHHHH
Q 019868 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGL----AGLRVGYGAFPLSIIE 303 (334)
Q Consensus 240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl----~G~R~G~l~~~~~~i~ 303 (334)
+.+.++. +.++++ +.+... -..+...++.+.+|++++..- ||+ .|..+||..+.++..+
T Consensus 232 l~~~~h~~~al~~v---~aDpla-L~LL~pPGe~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~~R 295 (450)
T COG0403 232 LIEAAHSAGALVIV---AADPLA-LGLLKPPGEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEFKR 295 (450)
T ss_pred HHHHHhhcCCEEEE---EechhH-hhccCCccccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhHhh
Confidence 8888876 655553 111100 012222345667799988766 444 4788899988877655
No 381
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.69 E-value=0.00025 Score=65.87 Aligned_cols=191 Identities=20% Similarity=0.171 Sum_probs=117.1
Q ss_pred eecCCCCCCCCCCHHHHHHHhc-C--cCCCCCCC------cC----hHHHHH-HHHHhcCCCCC----CEEEeCCHHHHH
Q 019868 98 VKIDANENPYGPPPEVREALGQ-L--KFPYIYPD------PE----SRRLRA-ALAKDSGLESD----HILVGCGADELI 159 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~al~~-~--~~~~~Yp~------~g----~~~lr~-~lA~~~~~~~~----~I~~t~G~~~~i 159 (334)
|.|=..||- .+..+.+|+.. + .+..+||. .. .+.|.+ ..-+.++++|+ ||..-+|+. +.
T Consensus 43 ieLIaSENF--ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSP-AN 119 (477)
T KOG2467|consen 43 IELIASENF--TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSP-AN 119 (477)
T ss_pred eeEeecccc--hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCc-hh
Confidence 555455553 34678888876 2 23344442 11 122222 22345688776 677778876 55
Q ss_pred HHHHHHhcCCCCEEEEcCCCChh-----HHHHHHHCCCeEEEe-----eC-CCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868 160 DLIMRCVLDPGDKIVDCPPTFTM-----YEFDAAVNGAAVVKV-----PR-KSDFSLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 160 ~~~~~~l~~~gd~Vl~~~p~y~~-----~~~~~~~~G~~v~~v-----~~-~~~~~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
..+..+++.|+|+|.-.+.-.+. |..-.+...+.-+++ .. ..++-+|.|.|++....-++|+|+.-.-.
T Consensus 120 favYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~Sa 199 (477)
T KOG2467|consen 120 FAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSA 199 (477)
T ss_pred hHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEecccc
Confidence 56777799999999855533221 111111122222222 12 25567999999988766789988864333
Q ss_pred CccccCCcHHHHHHHHhC-CCeEEEccCCc-CccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEc
Q 019868 229 NPDGSIINDEDLLKILEM-PILVVLDEAYT-EFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAF 297 (334)
Q Consensus 229 NPtG~~~~~~~l~~l~~~-~~~lIvDeay~-~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~ 297 (334)
.-..++-.++++|++. +.++++|.++. ++...+-...-+. -..|+..+..|. +-|.|.|.+.-
T Consensus 200 --Y~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe--y~DiVTTTTHKs--LRGPRg~mIFy 264 (477)
T KOG2467|consen 200 --YSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE--YCDIVTTTTHKS--LRGPRGAMIFY 264 (477)
T ss_pred --chhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc--ccceeecccccc--ccCCcceeEEE
Confidence 3377899999999998 99999999984 3432221111111 124889999996 57999998875
No 382
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00062 Score=65.12 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=115.7
Q ss_pred HHHHHHHHhcCCCCCCE-EEeCCHHHHHHHHHHHhc----C-CC---CEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CC
Q 019868 133 RLRAALAKDSGLESDHI-LVGCGADELIDLIMRCVL----D-PG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD 202 (334)
Q Consensus 133 ~lr~~lA~~~~~~~~~I-~~t~G~~~~i~~~~~~l~----~-~g---d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~ 202 (334)
+.-.-++.+++.+++.+ ..|.|+++++.+..+... . .| ..++++...+..+...++..+.++..||.+ .+
T Consensus 124 ~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~ 203 (491)
T KOG1383|consen 124 ECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGD 203 (491)
T ss_pred HHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccc
Confidence 44455566676554422 347899999766666542 1 23 357777778889999999999999999965 78
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC--CCeEEEccCCcCccCC--CCchhhhc--CCCcEE
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM--PILVVLDEAYTEFSGL--ESRMEWVK--KHDNLI 276 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~--~~~lIvDeay~~~~~~--~~~~~~~~--~~~~~i 276 (334)
|.+|+.++.+.++ +++.+++..-|+-|+|..=+.+++.++.-. ++.+.+|.+-+.|.-. .......+ ...-.=
T Consensus 204 ~~~D~~k~~~~i~-eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~S 282 (491)
T KOG1383|consen 204 YRVDPGKVVRMID-ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTS 282 (491)
T ss_pred eEecHHHHHHHhc-cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCcee
Confidence 9999999999998 799999999999999999999998887643 9999999999888741 11111111 111112
Q ss_pred EEcCCchhhcccccchheeEc
Q 019868 277 VLRTFSKRAGLAGLRVGYGAF 297 (334)
Q Consensus 277 ~i~S~SK~~gl~G~R~G~l~~ 297 (334)
+--+-+| ||+.--.+||++-
T Consensus 283 isa~~HK-YGl~~~G~~~vl~ 302 (491)
T KOG1383|consen 283 ISADGHK-YGLAPAGSSWVLY 302 (491)
T ss_pred Eeeccce-eeeeecCcEEEEE
Confidence 2233466 6776666888865
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.63 E-value=0.025 Score=53.79 Aligned_cols=165 Identities=15% Similarity=0.032 Sum_probs=98.2
Q ss_pred hcCCC-CCCEEEeCCHHHHHHHH-HHHhc--CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC---CCCCCCCHHHHHHh
Q 019868 141 DSGLE-SDHILVGCGADELIDLI-MRCVL--DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR---KSDFSLNVELIADA 213 (334)
Q Consensus 141 ~~~~~-~~~I~~t~G~~~~i~~~-~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~---~~~~~~d~~~l~~~ 213 (334)
..|+. ....++.+.+|..--.+ +.++. ..++.|+.+.-.+-.-...+..+|.+++.|+. .+....|++.+++.
T Consensus 68 ~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~ 147 (389)
T PF05889_consen 68 LAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAK 147 (389)
T ss_dssp HTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHH
T ss_pred HcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHH
Confidence 34764 24566766665433332 33332 46789998887776666777889999999982 23334568888887
Q ss_pred ccc--CCceEEEEeCCCCccccCCc-HHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhc---C-CCcEEEEcCCchhh
Q 019868 214 VER--EKPKCIFLTSPNNPDGSIIN-DEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVK---K-HDNLIVLRTFSKRA 285 (334)
Q Consensus 214 l~~--~~~~~i~l~~p~NPtG~~~~-~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~---~-~~~~i~i~S~SK~~ 285 (334)
+++ .+..+.+++++.--.|...| .+++.+|++. ++..|+-.||.-=.. ..+..+. . .--.+++.|.-|+|
T Consensus 148 i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~--~~~~~i~~a~~~GRvda~vqS~dkNF 225 (389)
T PF05889_consen 148 IEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSS--KCMHLIQQAWRVGRVDAFVQSTDKNF 225 (389)
T ss_dssp HHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-H--HHHHHHHHHHHHSTCSEEEEEHHHHH
T ss_pred HHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHH--HHHHHHHHHHhcCCcceeeeecCCCE
Confidence 753 34567777777666777777 8888888887 999999999974211 1111111 1 12238999999999
Q ss_pred cccccchheeEc-CHHHHHHHHHh
Q 019868 286 GLAGLRVGYGAF-PLSIIEYLWRA 308 (334)
Q Consensus 286 gl~G~R~G~l~~-~~~~i~~l~~~ 308 (334)
- -+..-+.+.+ ++..+..+.+.
T Consensus 226 ~-VPvGgai~As~~~~~i~~vs~~ 248 (389)
T PF05889_consen 226 M-VPVGGAIMASFDPSGILAVSKE 248 (389)
T ss_dssp C-EESSHEEEEESSHHHHHHHHHT
T ss_pred E-ecCCCcEEEecCHHHHHHHHHH
Confidence 4 4433444444 56777776543
No 384
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=96.63 E-value=0.0029 Score=57.46 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=73.6
Q ss_pred CCCCccccCCcH-HHHHHHHhC----CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 226 SPNNPDGSIIND-EDLLKILEM----PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 226 ~p~NPtG~~~~~-~~l~~l~~~----~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
+-..=-|+++++ ...+++++. |.+.|.||+..+|..-++.......++-+--+-++.|-+| .|..++.++..++
T Consensus 217 slQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmG-NGhPVa~Vattke 295 (452)
T KOG1403|consen 217 SLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMG-NGHPVAAVATTKE 295 (452)
T ss_pred HHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCC-CCCeeeEEeccHH
Confidence 444556777754 445556553 8899999999999866665555555554444667899998 9999999999999
Q ss_pred HHHHHHHhcC----CCCCcHHHHHHHHHHhc
Q 019868 301 IIEYLWRAKQ----PYNVSVAAEVAACAALQ 327 (334)
Q Consensus 301 ~i~~l~~~~~----~~~~~~~~q~aa~~~L~ 327 (334)
+.+++..... .|+-|+.+.+++.++|+
T Consensus 296 IA~Af~atgv~YFNTyGGnPVsCAv~laVm~ 326 (452)
T KOG1403|consen 296 IAQAFHATGVEYFNTYGGNPVSCAVGLAVMR 326 (452)
T ss_pred HHHHhccccceehhccCCCchhHHHHHHHHH
Confidence 9998875332 35678888888877764
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=96.48 E-value=0.12 Score=54.75 Aligned_cols=190 Identities=14% Similarity=0.057 Sum_probs=116.3
Q ss_pred eecCCCCCCCCCCHHHHH-HHhcCcCCCC---C-CC--cC----hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh
Q 019868 98 VKIDANENPYGPPPEVRE-ALGQLKFPYI---Y-PD--PE----SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV 166 (334)
Q Consensus 98 i~l~~~~~~~~~~~~v~~-al~~~~~~~~---Y-p~--~g----~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l 166 (334)
.-++.|..+.-.|+.+.+ .+.+-..... | |. .| .-++...++++.|.+-.|--+-.|++.+-+.++.+.
T Consensus 82 ~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~ 161 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAK 161 (954)
T ss_pred ccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHH
Confidence 455667777767777744 4444322233 3 32 23 247888899999988666666667776655444433
Q ss_pred c-C--CCCEEEEcCCCChhHHHHHH----HCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHH
Q 019868 167 L-D--PGDKIVDCPPTFTMYEFDAA----VNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDED 239 (334)
Q Consensus 167 ~-~--~gd~Vl~~~p~y~~~~~~~~----~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~ 239 (334)
. . +..+|++++-.|+.+....+ ..|++++. +++++.+. .++-++++.+||. .|.+.+.++
T Consensus 162 ~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~-~~~~~v~vq~P~~-~G~i~d~~~ 228 (954)
T PRK12566 162 RVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAA-HAVFGALLQYPDT-HGEIRDLRP 228 (954)
T ss_pred HHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCC-CCEEEEEEECCCC-ceEEccHHH
Confidence 2 2 24689999999988776554 36777664 22333443 4678899999974 899989889
Q ss_pred HHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEcC---CchhhcccccchheeEcCHHHHHH
Q 019868 240 LLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRT---FSKRAGLAGLRVGYGAFPLSIIEY 304 (334)
Q Consensus 240 l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S---~SK~~gl~G~R~G~l~~~~~~i~~ 304 (334)
+.++++. +.++|+ .+. .++- ..+...++.+.+|++++ |.=-+|..|--.||+.+.+++.+.
T Consensus 229 i~~~~h~~gal~~~-~~d-~laL--~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~ 293 (954)
T PRK12566 229 LIDQLHGQQALACV-AAD-LLSL--LVLTPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRA 293 (954)
T ss_pred HHHHHHHcCCEEEE-EeC-HHHH--hCCCChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhh
Confidence 9888876 666442 221 1110 11222345566677763 233334447778999888776653
No 386
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.17 E-value=0.037 Score=51.72 Aligned_cols=130 Identities=18% Similarity=0.247 Sum_probs=90.5
Q ss_pred CCC-CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcC-----CCCEEEEcCCCC-hhHHHHHHHCCCeEEE
Q 019868 124 YIY-PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLD-----PGDKIVDCPPTF-TMYEFDAAVNGAAVVK 196 (334)
Q Consensus 124 ~~Y-p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~-----~gd~Vl~~~p~y-~~~~~~~~~~G~~v~~ 196 (334)
..| .+.+...|++++.+.+|. +.++.|.-+..+=+.++..+++ ||.+.++++..| .......+..|+.++-
T Consensus 73 EAYagsrs~~~L~~avkdifGf--q~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n 150 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIFGF--QYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRN 150 (471)
T ss_pred hhhcccccHHHHHHHHHHhcCc--eeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccc
Confidence 446 556789999999999996 4777777666666666665554 454555555555 4455566678988877
Q ss_pred eeCCC----------CCCCCHHHHHHhccc---CCceEEEEe-CCCCccccCCcHHHHHHHHh---C-CCeEEEccC
Q 019868 197 VPRKS----------DFSLNVELIADAVER---EKPKCIFLT-SPNNPDGSIINDEDLLKILE---M-PILVVLDEA 255 (334)
Q Consensus 197 v~~~~----------~~~~d~~~l~~~l~~---~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~---~-~~~lIvDea 255 (334)
++.++ .+.+|++.+++.+++ ++...|+++ ..|.--|+..+.+-+++..+ . ++.++.|.+
T Consensus 151 ~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~ 227 (471)
T COG3033 151 VYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAA 227 (471)
T ss_pred ccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehh
Confidence 66221 246899999999864 345566666 55667788888777766554 4 999999986
No 387
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=96.12 E-value=0.093 Score=50.13 Aligned_cols=165 Identities=16% Similarity=0.067 Sum_probs=105.7
Q ss_pred HHHHHHhcCCCC--CCEEEeCCHHHHHHHHHHHhcC--C-----C-----CE-EEEcCCCChhHHHHHHHCC---CeEEE
Q 019868 135 RAALAKDSGLES--DHILVGCGADELIDLIMRCVLD--P-----G-----DK-IVDCPPTFTMYEFDAAVNG---AAVVK 196 (334)
Q Consensus 135 r~~lA~~~~~~~--~~I~~t~G~~~~i~~~~~~l~~--~-----g-----d~-Vl~~~p~y~~~~~~~~~~G---~~v~~ 196 (334)
-..+.+..|.+. |.|+.-.|+...+..+..+-.+ | | +- ..+++-+|.+....+..+| -.++.
T Consensus 147 l~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~ 226 (510)
T KOG0629|consen 147 LAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIK 226 (510)
T ss_pred HHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEE
Confidence 333334445544 5666666666666555443211 1 2 23 3455667778888888888 57888
Q ss_pred eeCCCCCCCCHHHHHHhcccCCce----EEE-EeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccC-CCCchhhh
Q 019868 197 VPRKSDFSLNVELIADAVEREKPK----CIF-LTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSG-LESRMEWV 269 (334)
Q Consensus 197 v~~~~~~~~d~~~l~~~l~~~~~~----~i~-l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~-~~~~~~~~ 269 (334)
|+.++.+.+++++||+.+...+.+ .++ .+.-....|..=|.+.+.++++. ++|+.+|.+|.+..- .......+
T Consensus 227 v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl 306 (510)
T KOG0629|consen 227 VKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKL 306 (510)
T ss_pred ecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhc
Confidence 888888899999999987533322 222 23446788999999999999988 999999999987321 11111122
Q ss_pred cC-CCcEEEEcCCchhhcccccchheeEcCHH
Q 019868 270 KK-HDNLIVLRTFSKRAGLAGLRVGYGAFPLS 300 (334)
Q Consensus 270 ~~-~~~~i~i~S~SK~~gl~G~R~G~l~~~~~ 300 (334)
.. ...--+..+..|..| +.+.++..+...+
T Consensus 307 ~Giera~SvtwnpHK~~g-aplqCsa~l~r~~ 337 (510)
T KOG0629|consen 307 TGIERANSVTWNPHKLMG-APLQCSAFLTREE 337 (510)
T ss_pred cCccccCceeecHHHhhc-CcchhhHHHHHHH
Confidence 11 111245567899888 6788887776543
No 388
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=95.13 E-value=0.24 Score=47.84 Aligned_cols=133 Identities=13% Similarity=0.220 Sum_probs=88.4
Q ss_pred CCcChHHHHHHHHHhc----CC----------CCCCEEEeCCHHHHHHHHHHHh------cCCC------------CEEE
Q 019868 127 PDPESRRLRAALAKDS----GL----------ESDHILVGCGADELIDLIMRCV------LDPG------------DKIV 174 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~----~~----------~~~~I~~t~G~~~~i~~~~~~l------~~~g------------d~Vl 174 (334)
..|...+|..-+.+|+ ++ +.--|+-++.+...+-.++.+- .+.+ =.+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 4455677776666664 22 2234666666555555555432 1222 1456
Q ss_pred EcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCc----eEEEEeCCCCccccCC--cHHHHHHHHhC-C
Q 019868 175 DCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKP----KCIFLTSPNNPDGSII--NDEDLLKILEM-P 247 (334)
Q Consensus 175 ~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~----~~i~l~~p~NPtG~~~--~~~~l~~l~~~-~ 247 (334)
..+-.+.+.+..+...|.+...++.+.+|.++.+.|.++++++.. -.+++.+.. -||.+. ..+++-.+++. +
T Consensus 187 ~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~ca~D~l~elg~Vc~~~g 265 (511)
T KOG0628|consen 187 CSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSSCAFDELEELGPVCREEG 265 (511)
T ss_pred ecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeec-CccccccccHHHhcchhhhcC
Confidence 778899999999999999999999888999999999999975332 233333333 244333 46667777776 9
Q ss_pred CeEEEccCCcCcc
Q 019868 248 ILVVLDEAYTEFS 260 (334)
Q Consensus 248 ~~lIvDeay~~~~ 260 (334)
+|+.+|.+|++-+
T Consensus 266 lWLHVDAAYAGsa 278 (511)
T KOG0628|consen 266 LWLHVDAAYAGSA 278 (511)
T ss_pred EEEEeehhhcccc
Confidence 9999999999643
No 389
>PLN02672 methionine S-methyltransferase
Probab=94.22 E-value=0.5 Score=51.14 Aligned_cols=182 Identities=15% Similarity=0.214 Sum_probs=114.0
Q ss_pred CCcChHHHHHHHHHhc------CCCCCCEEEeCCHHHHHHHHHHHh------cCCCCEEEEcCCCChhHHHHHHHCC---
Q 019868 127 PDPESRRLRAALAKDS------GLESDHILVGCGADELIDLIMRCV------LDPGDKIVDCPPTFTMYEFDAAVNG--- 191 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~------~~~~~~I~~t~G~~~~i~~~~~~l------~~~gd~Vl~~~p~y~~~~~~~~~~G--- 191 (334)
|..|...+|..+|.++ .+.+++|++.+.-..+|..+++.+ ++.+..-.++ +.| .......|
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~ 499 (1082)
T PLN02672 424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKW---LTSLAIENATS 499 (1082)
T ss_pred CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHH---HhHhhhhcccc
Confidence 5668999999999876 468999999999999998888843 2333222221 122 22111222
Q ss_pred -------CeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccC-CcCc
Q 019868 192 -------AAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEA-YTEF 259 (334)
Q Consensus 192 -------~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDea-y~~~ 259 (334)
++|+.-|.. .+.+.+.+++-++++|+..-.. +-..+...++.|++. |..++.|+. |.++
T Consensus 500 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 570 (1082)
T PLN02672 500 DSKSDDVITVIEAPRQ------SDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTAEIGARLFLDISDHLEL 570 (1082)
T ss_pred cCccCCeEEEEeCCCc------chHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHHhhCcEEEEehhhheee
Confidence 233333321 1355666665678888866333 334455556666543 999999985 5555
Q ss_pred cCCCCc---hhhh---cCCCcEEEEcCCchhhcccccchheeEc-CHHHHHHHHHhcCC--CCCcHHHHHH
Q 019868 260 SGLESR---MEWV---KKHDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQP--YNVSVAAEVA 321 (334)
Q Consensus 260 ~~~~~~---~~~~---~~~~~~i~i~S~SK~~gl~G~R~G~l~~-~~~~i~~l~~~~~~--~~~~~~~q~a 321 (334)
+..+.. ...+ ....+..++.++-|+--.+.+-+.+++. ++.+...+.+.... .+.+.++|+-
T Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 571 SSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENEAVLKALSKTGEVLEGRTAIISQFY 641 (1082)
T ss_pred ccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcHHHHHHHHHHHHhhccchHHHHHHH
Confidence 543322 2222 2356778899999987778999999997 66777777766554 3455566653
No 390
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=93.41 E-value=1.2 Score=45.14 Aligned_cols=153 Identities=18% Similarity=0.157 Sum_probs=93.7
Q ss_pred ChHHHHHHHHHhc----CCCCCCEEE--eCCH---HHHHHHHHHHhcCCC----CEEEEcCCCChhHHHHHHHCCCeEEE
Q 019868 130 ESRRLRAALAKDS----GLESDHILV--GCGA---DELIDLIMRCVLDPG----DKIVDCPPTFTMYEFDAAVNGAAVVK 196 (334)
Q Consensus 130 g~~~lr~~lA~~~----~~~~~~I~~--t~G~---~~~i~~~~~~l~~~g----d~Vl~~~p~y~~~~~~~~~~G~~v~~ 196 (334)
|+.++-+.+-+++ |. |++.+ -+|+ -.++..+-..+..+| ...++|...++.....++++|.++++
T Consensus 579 GY~~lf~~Le~~Lc~iTG~--D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmkvvp 656 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGF--DSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVP 656 (1001)
T ss_pred hHHHHHHHHHHHhheeecc--cceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEE
Confidence 4555555555444 44 34544 3333 334444433333444 34578888999888889999999999
Q ss_pred eeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccC-CcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCC
Q 019868 197 VPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSI-INDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKH 272 (334)
Q Consensus 197 v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~-~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~ 272 (334)
|..+.++.+|..+|.++.++ ++-.++.++.|.. -|.. -+.+++.++++. |.-|..|.+-..-.-+ +-..++.
T Consensus 657 V~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVG---lc~pGd~ 732 (1001)
T KOG2040|consen 657 VGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVG---LCRPGDI 732 (1001)
T ss_pred eeccCCCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecCCCccceec---ccCCccc
Confidence 99888899999999887754 3456888888864 2332 245666666655 8888888875431100 0011233
Q ss_pred CcEEEEcCCchhhccc
Q 019868 273 DNLIVLRTFSKRAGLA 288 (334)
Q Consensus 273 ~~~i~i~S~SK~~gl~ 288 (334)
+..+.=--+.|+|.+|
T Consensus 733 GaDV~HLNLHKTFcIP 748 (1001)
T KOG2040|consen 733 GADVCHLNLHKTFCIP 748 (1001)
T ss_pred cccceeecccceeeec
Confidence 3334444577887554
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=93.07 E-value=0.29 Score=45.01 Aligned_cols=165 Identities=15% Similarity=0.066 Sum_probs=113.0
Q ss_pred ChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCC---CEEEEcCCCCh----hHHHHHHHCCCeEE----Eee
Q 019868 130 ESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPG---DKIVDCPPTFT----MYEFDAAVNGAAVV----KVP 198 (334)
Q Consensus 130 g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~G~~v~----~v~ 198 (334)
+.+.....+++..|...++|.+.+.-+-.+..++.++.+|- -+|+...-.|+ .....++..|..+. .+.
T Consensus 112 ~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ie 191 (465)
T KOG3846|consen 112 IDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIE 191 (465)
T ss_pred cchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEec
Confidence 45677788889999999999999999999999999998775 36787776665 34566777887643 232
Q ss_pred -CCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCc
Q 019868 199 -RKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDN 274 (334)
Q Consensus 199 -~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~ 274 (334)
.+....+-.+++.+.++. +...+|+++..+.-||+.++...+...-+. +++|=.|-+++-. ...-.+.+++-
T Consensus 192 PREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvg----NVpL~LHdWgV 267 (465)
T KOG3846|consen 192 PREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVG----NVPLQLHDWGV 267 (465)
T ss_pred ccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhc----CCceEEeecCC
Confidence 223345667777777753 235567777889999999999998866555 8888888887632 11122234555
Q ss_pred EEEEcCCchhhccccc-chheeEcCH
Q 019868 275 LIVLRTFSKRAGLAGL-RVGYGAFPL 299 (334)
Q Consensus 275 ~i~i~S~SK~~gl~G~-R~G~l~~~~ 299 (334)
.+-+.---| |+.+|. .+|-+.+.+
T Consensus 268 DFACWCSYK-YlnaGaGgIgGlFvHe 292 (465)
T KOG3846|consen 268 DFACWCSYK-YLNAGAGGIGGLFVHE 292 (465)
T ss_pred ceEEEeeec-ccccCCCccceeeeeh
Confidence 566666677 334442 245555443
No 392
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=92.63 E-value=1.5 Score=41.40 Aligned_cols=164 Identities=12% Similarity=0.073 Sum_probs=93.8
Q ss_pred hHHHHHHHHHhcCCCCC-CEEE-eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH-HHHHHCCC--eEEEee-CCC--C
Q 019868 131 SRRLRAALAKDSGLESD-HILV-GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYE-FDAAVNGA--AVVKVP-RKS--D 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~-~I~~-t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~G~--~v~~v~-~~~--~ 202 (334)
..+.++.+.++++++.+ +|++ -.|++....++...|+.+...-.+..-.|.... ..++..+- ++.... ... +
T Consensus 52 ~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~ 131 (365)
T COG1932 52 LEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYG 131 (365)
T ss_pred HHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCcc
Confidence 45677778888998655 5555 457788888888888866543133344565332 22333443 222221 112 2
Q ss_pred CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCc
Q 019868 203 FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFS 282 (334)
Q Consensus 203 ~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~S 282 (334)
.-++++.+. +. ++..-|.+|.-+--+|.-++. ...+.. +.++|+|..-.-++..- +-..-.++-.|.-
T Consensus 132 ~iP~~~~~~--~~-~~~ayv~~~~NeTi~Gv~v~~--~p~~~~-~~~~v~D~SS~ilsr~i------Dvsk~dviyagaQ 199 (365)
T COG1932 132 SIPDLSKWD--FS-DNDAYVHFCWNETISGVEVPE--LPDIGS-DGLLVADASSAILSRPI------DVSKYDVIYAGAQ 199 (365)
T ss_pred CCCChhhcc--cC-CCccEEEEecCCcccceEccC--CCCCCC-CceEEEecccHHhcCCC------ChhHcceEEEehh
Confidence 234444433 22 223336666544567776651 111111 37788888654333211 1112238888999
Q ss_pred hhhcccccchheeEcCHHHHHHHHHh
Q 019868 283 KRAGLAGLRVGYGAFPLSIIEYLWRA 308 (334)
Q Consensus 283 K~~gl~G~R~G~l~~~~~~i~~l~~~ 308 (334)
|++|..| ++.+++.+++++++...
T Consensus 200 KnlGpaG--ltvvIvr~~~l~r~~~~ 223 (365)
T COG1932 200 KNLGPAG--LTVVIVRPDLLERAESY 223 (365)
T ss_pred hccCccc--eEEEEEcHHHHhccccc
Confidence 9999888 89999999999988665
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=83.96 E-value=4.9 Score=36.40 Aligned_cols=119 Identities=13% Similarity=0.110 Sum_probs=68.6
Q ss_pred HHCCCeEEEeeC---CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC-----cHHHHHHHHhC-CCeEEEccCCcC
Q 019868 188 AVNGAAVVKVPR---KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII-----NDEDLLKILEM-PILVVLDEAYTE 258 (334)
Q Consensus 188 ~~~G~~v~~v~~---~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~-----~~~~l~~l~~~-~~~lIvDeay~~ 258 (334)
-.+|.+++.+.. .+...-|++.+++.+++.....|+..+ .-|.... ..|++..|+.. ++.-|+.++|..
T Consensus 121 ~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~--sttscfapr~pd~leaiaaica~~diphivnnaygl 198 (432)
T KOG3843|consen 121 IHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIH--STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGL 198 (432)
T ss_pred HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEe--ecccccCCCCCchHHHHHHHHHccCchhhhcccccc
Confidence 347998887762 233445889999988765666555432 1122222 34556666655 888899999975
Q ss_pred ccCCC-CchhhhcCCCc-EEEEcCCchhhcccccchheeEc--CHHHHHHHHHhcC
Q 019868 259 FSGLE-SRMEWVKKHDN-LIVLRTFSKRAGLAGLRVGYGAF--PLSIIEYLWRAKQ 310 (334)
Q Consensus 259 ~~~~~-~~~~~~~~~~~-~i~i~S~SK~~gl~G~R~G~l~~--~~~~i~~l~~~~~ 310 (334)
-..+- .........++ ..++.|+-|+|-.|= .|.+++ ++..|+.+.+.-.
T Consensus 199 qsee~i~~iaa~~~~grida~vqsldknf~vpv--ggaiia~fk~n~iq~iak~yp 252 (432)
T KOG3843|consen 199 QSEECIHKIAAAAECGRIDAFVQSLDKNFMVPV--GGAIIAAFKDNFIQEIAKMYP 252 (432)
T ss_pred chHHHHHHHHHHhhhccHHHHHHHhhhcceeec--chhHhhHhHHHHHHHHHHhCC
Confidence 33210 01111111222 367889999996552 144443 6778887766543
No 394
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=79.71 E-value=17 Score=33.23 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=51.5
Q ss_pred hcCCCCEE-EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868 166 VLDPGDKI-VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (334)
Q Consensus 166 l~~~gd~V-l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 244 (334)
|.+.|-.| .+....=.......+..|..+..++...++.-|.+++.+.+++.++.+|++.+. .++.+..+.+-
T Consensus 27 l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y------~~~~~~~~~~k 100 (279)
T TIGR03590 27 LHAQGAEVAFACKPLPGDLIDLLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHY------GLDADWEKLIK 100 (279)
T ss_pred HHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCC------CCCHHHHHHHH
Confidence 43456444 343333233345667789998888754445557888888887667888887765 34555555554
Q ss_pred hC-CCeEEEccC
Q 019868 245 EM-PILVVLDEA 255 (334)
Q Consensus 245 ~~-~~~lIvDea 255 (334)
.. ..++++|+-
T Consensus 101 ~~~~~l~~iDD~ 112 (279)
T TIGR03590 101 EFGRKILVIDDL 112 (279)
T ss_pred HhCCeEEEEecC
Confidence 44 355666663
No 395
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=79.65 E-value=30 Score=35.52 Aligned_cols=186 Identities=12% Similarity=0.144 Sum_probs=100.3
Q ss_pred CCCCCCCCCCHHHHH-HHhcCcCCCCC-CC-----cC-hH---HHHHHHHHhcCCCCCCEEEeCCHHHHHHHH-HHHhcC
Q 019868 101 DANENPYGPPPEVRE-ALGQLKFPYIY-PD-----PE-SR---RLRAALAKDSGLESDHILVGCGADELIDLI-MRCVLD 168 (334)
Q Consensus 101 ~~~~~~~~~~~~v~~-al~~~~~~~~Y-p~-----~g-~~---~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~-~~~l~~ 168 (334)
+.|....-.|+.+.. .+.+-.....| |- .| .+ .+...++++-|++..|--+---++.+-+.. +..-.+
T Consensus 124 GmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgTAaaEAm~l~~~~~ 203 (1001)
T KOG2040|consen 124 GMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGTAAAEAMALCNRIN 203 (1001)
T ss_pred ccccccccCcHHHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccchhHHHHHHHHHhhc
Confidence 444444445565543 34443333445 31 12 12 345566777787665544433333333333 322246
Q ss_pred CCCEEEEcCCCChhHHHHHHH----CCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868 169 PGDKIVDCPPTFTMYEFDAAV----NGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (334)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~----~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 244 (334)
++.++++..-+|+.....++- .|++++.. |+++..... ++...+++..|.. .|.+.+-+++.+++
T Consensus 204 krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~~~~~~s~--~~v~gvlvQYP~t-~G~i~d~~el~~~a 272 (1001)
T KOG2040|consen 204 KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DIKEADYSS--KDVSGVLVQYPDT-EGSVLDFDELVELA 272 (1001)
T ss_pred ccceEEecCCCCcchhhhhhccccccceeEEec--------CHHHhhccc--cceeEEEEEcCCC-CCcccCHHHHHHHh
Confidence 677888988899876665543 34443322 233322222 3567788887764 79999999999999
Q ss_pred hC-CCeEEEc-cCCcCccCCCCchhhhcCCCcEEEEcCCchhhccc----ccchheeEcCHHHHH
Q 019868 245 EM-PILVVLD-EAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLA----GLRVGYGAFPLSIIE 303 (334)
Q Consensus 245 ~~-~~~lIvD-eay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~----G~R~G~l~~~~~~i~ 303 (334)
+. +.++++- +--+ + ..+...++.+..|.++|--. ||.| |...||..+.+++.+
T Consensus 273 ~~~~s~vv~atDLLa-L----tiLrpPgefGaDIavGSsQR-FGVPlGYGGPHAaFfAv~~~l~R 331 (1001)
T KOG2040|consen 273 HANGSLVVMATDLLA-L----TILRPPGEFGADIAVGSSQR-FGVPLGYGGPHAAFFAVSESLVR 331 (1001)
T ss_pred hccCceEEEeehhhH-H----HccCChhhcCceeeeccccc-cCccccCCCchHHHHHHHHHHHh
Confidence 98 5554431 1111 0 12222345666788888655 5443 555666655544433
No 396
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=74.44 E-value=23 Score=32.87 Aligned_cols=98 Identities=18% Similarity=0.224 Sum_probs=52.4
Q ss_pred CCCCCEEE-eCCHHHHHHHHHHHhcCCCCEE--EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCC-CHHHHHHhcccCCc
Q 019868 144 LESDHILV-GCGADELIDLIMRCVLDPGDKI--VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKP 219 (334)
Q Consensus 144 ~~~~~I~~-t~G~~~~i~~~~~~l~~~gd~V--l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~-d~~~l~~~l~~~~~ 219 (334)
+.+...++ .+++..+|.+++-+- ..|-++ ++|+..=.......+.+|++++.+|..+++.. -.+.+++... ..+
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa-~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~-~~p 136 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAA-AKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELAA-EIP 136 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHH-HcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHH-hCC
Confidence 45555555 444445666655532 244333 34443334567788889999999986333111 1233333443 333
Q ss_pred -eEEEEe---CCCCccccCC-cHHHHHHH
Q 019868 220 -KCIFLT---SPNNPDGSII-NDEDLLKI 243 (334)
Q Consensus 220 -~~i~l~---~p~NPtG~~~-~~~~l~~l 243 (334)
++++++ ||.||-.... +-.|+.+-
T Consensus 137 ~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~ 165 (300)
T COG0031 137 GYAVWLNQFENPANPEAHYETTGPEIWQQ 165 (300)
T ss_pred CceEchhhcCCCccHHHHHhhhHHHHHHH
Confidence 477774 6677766552 34444443
No 397
>PRK08265 short chain dehydrogenase; Provisional
Probab=68.80 E-value=67 Score=28.51 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=50.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceE
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~ 221 (334)
..+++|.|+...-..+...|++.|..|++.+-.-..........+.++..+..+- -|.+.+++.++. .+...
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI---TDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecC---CCHHHHHHHHHHHHHHhCCCCE
Confidence 3566666655555556666778898887765443333344444455555555322 244555444431 24566
Q ss_pred EEEeCC-CCccccCCcHHHHHHHHh
Q 019868 222 IFLTSP-NNPDGSIINDEDLLKILE 245 (334)
Q Consensus 222 i~l~~p-~NPtG~~~~~~~l~~l~~ 245 (334)
++.+.. ..+.+...+.+++.+..+
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHh
Confidence 654422 222333456677666554
No 398
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=68.76 E-value=2 Score=19.37 Aligned_cols=10 Identities=50% Similarity=0.610 Sum_probs=7.9
Q ss_pred ccccccCCCC
Q 019868 12 LCLLKSNFSS 21 (334)
Q Consensus 12 ~~~~~~~~~~ 21 (334)
|||.|+.+-|
T Consensus 3 l~wqksihgs 12 (12)
T PF08247_consen 3 LCWQKSIHGS 12 (12)
T ss_pred eeEeeeecCC
Confidence 7999988754
No 399
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=66.29 E-value=94 Score=27.48 Aligned_cols=154 Identities=18% Similarity=0.252 Sum_probs=88.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEE-----EcC-C-CC-------hhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHh
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIV-----DCP-P-TF-------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADA 213 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl-----~~~-p-~y-------~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~ 213 (334)
-+.+-+|+......+..++ +.|-.|. .+. + +| .....+++..|..++.........-..+++.++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~ 81 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEA 81 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHH
Confidence 3667789999987777754 4553332 111 1 12 223445667899988887543334467888888
Q ss_pred cccCCceEEEEeCCCCccccCCcHHHHH---HHHhC-CCeEEEccCCcCccCCCC--chhhhcCCCcEEEEcCCchhhcc
Q 019868 214 VEREKPKCIFLTSPNNPDGSIINDEDLL---KILEM-PILVVLDEAYTEFSGLES--RMEWVKKHDNLIVLRTFSKRAGL 287 (334)
Q Consensus 214 l~~~~~~~i~l~~p~NPtG~~~~~~~l~---~l~~~-~~~lIvDeay~~~~~~~~--~~~~~~~~~~~i~i~S~SK~~gl 287 (334)
++.-+...|+ +|.+++..+.. .+|+. ++-+ |.+++..++ .+..+-..+--+.+-+.|| .|+
T Consensus 82 l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~-----~~PLWg~d~~ell~e~~~~Gf~~~Iv~Vsa-~gL 148 (223)
T COG2102 82 LRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKV-----YAPLWGRDPEELLEEMVEAGFEAIIVAVSA-EGL 148 (223)
T ss_pred HHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEE-----eecccCCCHHHHHHHHHHcCCeEEEEEEec-cCC
Confidence 8755566777 78888766554 45655 6643 666664332 1111112211244445666 455
Q ss_pred cccchheeEcCHHHHHHHHHhcCCCCCcH
Q 019868 288 AGLRVGYGAFPLSIIEYLWRAKQPYNVSV 316 (334)
Q Consensus 288 ~G~R~G~l~~~~~~i~~l~~~~~~~~~~~ 316 (334)
...-+|. -.+.+.++.+......|++++
T Consensus 149 ~~~~lGr-~i~~~~~e~l~~l~~~ygi~~ 176 (223)
T COG2102 149 DESWLGR-RIDREFLEELKSLNRRYGIHP 176 (223)
T ss_pred ChHHhCC-ccCHHHHHHHHHHHHhcCCCc
Confidence 5533443 346677887777755555544
No 400
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=66.12 E-value=1e+02 Score=27.86 Aligned_cols=61 Identities=10% Similarity=-0.016 Sum_probs=37.4
Q ss_pred HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCcc--ccCCcHHHHHHHHh
Q 019868 184 EFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPD--GSIINDEDLLKILE 245 (334)
Q Consensus 184 ~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPt--G~~~~~~~l~~l~~ 245 (334)
...++.+|++++-.+...+-+--.++++.+.+ -+..+|+|..|.-|. ..+.+.+++.+.++
T Consensus 190 ~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~el~~~l~ 252 (256)
T TIGR00715 190 KALLREYRIDAVVTKASGEQGGELEKVKAAEA-LGINVIRIARPQTIPGVAIFDDISQLNQFVA 252 (256)
T ss_pred HHHHHHcCCCEEEEcCCCCccchHHHHHHHHH-cCCcEEEEeCCCCCCCCccCCCHHHHHHHHH
Confidence 34555577777766643222233567766665 578888888876443 45567777776654
No 401
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=60.00 E-value=59 Score=28.29 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=41.6
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEE-EEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCC
Q 019868 149 ILVGCGADELIDLIMRCVLDPGDKI-VDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSP 227 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd~V-l~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p 227 (334)
|+++.++-..-..++..|+.++-.| ++..+.-.......+..|++++..+.+ |.+.|.++++ +...|+++.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~--g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALK--GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT--TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHc--CCceEEeecC
Confidence 3444443334445566666666444 334433222233445689998865532 7899999996 5667777755
Q ss_pred CC
Q 019868 228 NN 229 (334)
Q Consensus 228 ~N 229 (334)
..
T Consensus 74 ~~ 75 (233)
T PF05368_consen 74 PS 75 (233)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 402
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=59.26 E-value=95 Score=30.27 Aligned_cols=58 Identities=29% Similarity=0.342 Sum_probs=41.7
Q ss_pred HhcC-CCCCCEEEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEee
Q 019868 140 KDSG-LESDHILVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (334)
Q Consensus 140 ~~~~-~~~~~I~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~ 198 (334)
+.++ +...++++ -|+.+...++...|...| ..|.+.+=++.--...+...|+++..+.
T Consensus 171 ~~~~~L~~~~vlv-IGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~l~ 230 (414)
T COG0373 171 RIFGSLKDKKVLV-IGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVALE 230 (414)
T ss_pred HHhcccccCeEEE-EcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeecHH
Confidence 3445 44444443 455566777888888888 8899999999888888888887666554
No 403
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=58.47 E-value=29 Score=32.93 Aligned_cols=84 Identities=17% Similarity=0.226 Sum_probs=44.6
Q ss_pred HHHHHHhccc----C-CceEEEEeCCCCccccC-CcHHHHHHH---HhC-CCeEEEccCCcCccCCCCchh---hhcCCC
Q 019868 207 VELIADAVER----E-KPKCIFLTSPNNPDGSI-INDEDLLKI---LEM-PILVVLDEAYTEFSGLESRME---WVKKHD 273 (334)
Q Consensus 207 ~~~l~~~l~~----~-~~~~i~l~~p~NPtG~~-~~~~~l~~l---~~~-~~~lIvDeay~~~~~~~~~~~---~~~~~~ 273 (334)
++++++.+.+ . ...+|++.--...-|.- .+.+..++| ++. ++.+|+||+.-+....+..+. +--..+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 5666666643 1 23345544334444543 356655554 444 999999999976543332211 111122
Q ss_pred cEEEEcCCchhhcccccchheeE
Q 019868 274 NLIVLRTFSKRAGLAGLRVGYGA 296 (334)
Q Consensus 274 ~~i~i~S~SK~~gl~G~R~G~l~ 296 (334)
..+ -+|||-|- .| ||..
T Consensus 335 pD~--vTFSKK~q-~g---Gffh 351 (484)
T KOG1405|consen 335 PDV--VTFSKKFQ-TG---GFFH 351 (484)
T ss_pred ccc--eehhhhhh-cC---cccc
Confidence 223 36999884 55 5554
No 404
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=57.18 E-value=1.5e+02 Score=26.72 Aligned_cols=111 Identities=22% Similarity=0.193 Sum_probs=64.0
Q ss_pred HHHHHHHHhcCCCCCCEEEeCCHHHHHHHHH-HHh--------c-------C-CCCEEEEcCCCCh--hHHHHHHHCCCe
Q 019868 133 RLRAALAKDSGLESDHILVGCGADELIDLIM-RCV--------L-------D-PGDKIVDCPPTFT--MYEFDAAVNGAA 193 (334)
Q Consensus 133 ~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~-~~l--------~-------~-~gd~Vl~~~p~y~--~~~~~~~~~G~~ 193 (334)
.+.+++...-.....+|++|.|+.+.-...- ... + . +.+.++.-.+-|. .-...++.++++
T Consensus 117 ~~~eA~~~l~~~~~~~iflttGsk~L~~f~~~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~ 196 (249)
T PF02571_consen 117 SYEEAAELLKELGGGRIFLTTGSKNLPPFVPAPLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGID 196 (249)
T ss_pred CHHHHHHHHhhcCCCCEEEeCchhhHHHHhhcccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCC
Confidence 4444444443444579999999986654432 100 0 0 1233443333332 334456668888
Q ss_pred EEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC--CcHHHHHHHHh
Q 019868 194 VVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI--INDEDLLKILE 245 (334)
Q Consensus 194 v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~--~~~~~l~~l~~ 245 (334)
++-.+...+- -..++++.+.+ -+..+|+|..|.-|.|.. -+.+++.+.++
T Consensus 197 ~lVtK~SG~~-g~~eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~e~l~~l~ 248 (249)
T PF02571_consen 197 VLVTKESGGS-GFDEKIEAARE-LGIPVIVIKRPPEPYGDPVVETIEELLDWLE 248 (249)
T ss_pred EEEEcCCCch-hhHHHHHHHHH-cCCeEEEEeCCCCCCCCcccCCHHHHHHHHh
Confidence 8877643222 23466666655 688999999887765554 46777766543
No 405
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=56.02 E-value=23 Score=32.91 Aligned_cols=139 Identities=20% Similarity=0.167 Sum_probs=72.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCC--CC-EEEEcCCCChhHH-HHHHHCC-CeEEEeeCCCCCCCCHHHHHHhcccCCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDP--GD-KIVDCPPTFTMYE-FDAAVNG-AAVVKVPRKSDFSLNVELIADAVEREKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~--gd-~Vl~~~p~y~~~~-~~~~~~G-~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i 222 (334)
.+++|.|+--.-..+++.+++. .+ .+.+...+|.... ......+ .++..+.-+ --|.+.+.+.+++.++.+|
T Consensus 2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~D---I~D~~~v~~~~~~~~~D~V 78 (340)
T COG1088 2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGD---ICDRELVDRLFKEYQPDAV 78 (340)
T ss_pred cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEecc---ccCHHHHHHHHHhcCCCeE
Confidence 4788888877777777777643 34 3456667997543 4433333 244454422 2256777777765455555
Q ss_pred EE-----------eCC-----CCccccCCcHHHHHHHHhC-C-CeEEEccCCcCccCCC-----------CchhhhcCCC
Q 019868 223 FL-----------TSP-----NNPDGSIINDEDLLKILEM-P-ILVVLDEAYTEFSGLE-----------SRMEWVKKHD 273 (334)
Q Consensus 223 ~l-----------~~p-----~NPtG~~~~~~~l~~l~~~-~-~~lIvDeay~~~~~~~-----------~~~~~~~~~~ 273 (334)
+= ..| .|-.|..-=.|..++.-.. . +.|=-||+|+++..+. +......+..
T Consensus 79 vhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAa 158 (340)
T COG1088 79 VHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAA 158 (340)
T ss_pred EEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhh
Confidence 42 112 2444443222222221110 1 2344699999876431 1111112223
Q ss_pred cEEEEcCCchhhcccc
Q 019868 274 NLIVLRTFSKRAGLAG 289 (334)
Q Consensus 274 ~~i~i~S~SK~~gl~G 289 (334)
....++++.++||++-
T Consensus 159 sD~lVray~~TYglp~ 174 (340)
T COG1088 159 SDLLVRAYVRTYGLPA 174 (340)
T ss_pred HHHHHHHHHHHcCCce
Confidence 3466777777777663
No 406
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=55.92 E-value=1.6e+02 Score=26.63 Aligned_cols=142 Identities=11% Similarity=0.091 Sum_probs=67.5
Q ss_pred HHHhCCCCCCeeecCCC-CCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHh-cCCCCCCEEEeCCH-HHHHHHH
Q 019868 87 SIQLGRKPEDIVKIDAN-ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKD-SGLESDHILVGCGA-DELIDLI 162 (334)
Q Consensus 87 ~~~~~~~~~~~i~l~~~-~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~-~~~~~~~I~~t~G~-~~~i~~~ 162 (334)
...+...+.++|.+++- ..|..--|.+.++-.+ +..+ ......-++-+++.+. ..++-......|-- .-++...
T Consensus 30 ~~~l~~~Gad~iElGiPfsDP~aDGpvIq~a~~~al~~G--~~~~~~~~~v~~ir~~~~~~plv~m~Y~Npi~~~G~e~f 107 (256)
T TIGR00262 30 IKTLIEAGADALELGVPFSDPLADGPTIQAADLRALRAG--MTPEKCFELLKKVRQKHPNIPIGLLTYYNLIFRKGVEEF 107 (256)
T ss_pred HHHHHHcCCCEEEECCCCCCCCCcCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHhcCCCCCEEEEEeccHHhhhhHHHH
Confidence 34444456677777763 2234334666655433 2221 1111233444445543 34332322222210 1234444
Q ss_pred HHHhcCCC-CEEEEcCCCCh---hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccC
Q 019868 163 MRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSI 234 (334)
Q Consensus 163 ~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~ 234 (334)
+..+.+-| |.|++++-.+. .+...++..|...+.+=.+ ..+.+.++...+ .....|++.+-+.-||..
T Consensus 108 ~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv~P---~T~~eri~~i~~-~~~gfiy~vs~~G~TG~~ 179 (256)
T TIGR00262 108 YAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLVAP---NADDERLKQIAE-KSQGFVYLVSRAGVTGAR 179 (256)
T ss_pred HHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEECC---CCCHHHHHHHHH-hCCCCEEEEECCCCCCCc
Confidence 55454444 77777775553 3344555678776644321 124566665554 233356655445677764
No 407
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=53.38 E-value=70 Score=30.37 Aligned_cols=71 Identities=24% Similarity=0.310 Sum_probs=50.4
Q ss_pred CCCCEEEEcCCCCh-hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHHh
Q 019868 168 DPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKILE 245 (334)
Q Consensus 168 ~~gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~~ 245 (334)
+++.+|++-+...- +........|+++..||.+ .+.+++.+ .+++.|+|+ .|.+|.-...-.+.+++++.
T Consensus 177 ~~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~----t~~eeIl~----~~pDGiflSNGPGDP~~~~~~i~~ik~l~~ 248 (368)
T COG0505 177 EPGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD----TSAEEILA----LNPDGIFLSNGPGDPAPLDYAIETIKELLG 248 (368)
T ss_pred CCCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC----CCHHHHHh----hCCCEEEEeCCCCChhHHHHHHHHHHHHhc
Confidence 45668888876654 4555556689999999843 35666654 467899997 79999766666777777776
Q ss_pred C
Q 019868 246 M 246 (334)
Q Consensus 246 ~ 246 (334)
.
T Consensus 249 ~ 249 (368)
T COG0505 249 T 249 (368)
T ss_pred c
Confidence 5
No 408
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=52.19 E-value=1.4e+02 Score=26.21 Aligned_cols=106 Identities=15% Similarity=0.056 Sum_probs=53.1
Q ss_pred HHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHH
Q 019868 136 AALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIAD 212 (334)
Q Consensus 136 ~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~ 212 (334)
+..+..+......+++|.|+...-..+.+.|.+.|..|++..-. ..... .....+.++..+..+- -|.+.+++
T Consensus 5 ~~~~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~i~~ 80 (258)
T PRK06935 5 KFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDL---TKPESAEK 80 (258)
T ss_pred hhccccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHH
Confidence 34444555555567777776666666677778889887665433 22222 2222455555554322 23444444
Q ss_pred hccc-----CCceEEEEeCC-CCccc-cCCcHHHHHHHHh
Q 019868 213 AVER-----EKPKCIFLTSP-NNPDG-SIINDEDLLKILE 245 (334)
Q Consensus 213 ~l~~-----~~~~~i~l~~p-~NPtG-~~~~~~~l~~l~~ 245 (334)
.+++ .+...++.+.. ..+.- ...+.+++++..+
T Consensus 81 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 120 (258)
T PRK06935 81 VVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMD 120 (258)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4321 24566665522 11110 1234556655444
No 409
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=51.07 E-value=43 Score=30.97 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=70.1
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC-h--hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-CCc
Q 019868 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-T--MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-EKP 219 (334)
Q Consensus 144 ~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y-~--~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-~~~ 219 (334)
+..+-|++|.|+...-..+..-+.+.|.++++-+-.= + .+....+..| ++..+..+-...-++..+.+.+++ .+.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEVGD 114 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4455677777776666666667888888775544322 2 2333334345 555554321111123333344432 233
Q ss_pred eEEEEeCCC---CccccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhh-h-cCCCcEEEEcCCchhhcccc
Q 019868 220 KCIFLTSPN---NPDGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEW-V-KKHDNLIVLRTFSKRAGLAG 289 (334)
Q Consensus 220 ~~i~l~~p~---NPtG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~-~-~~~~~~i~i~S~SK~~gl~G 289 (334)
--|++||.. .-...-.+.+++++..+.|+. ++|.......+. . ...++++.+.|..=-+|.+|
T Consensus 115 V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~-------~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~g 182 (300)
T KOG1201|consen 115 VDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTI-------AHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAG 182 (300)
T ss_pred ceEEEeccccccCCCccCCCHHHHHHHHHHhhH-------HHHHHHHHHhHHHHhcCCceEEEehhhhcccCCcc
Confidence 355666653 333445688999998776332 222211111111 1 13456677777655566665
No 410
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=49.72 E-value=2.2e+02 Score=26.46 Aligned_cols=162 Identities=11% Similarity=0.051 Sum_probs=85.2
Q ss_pred hHHHHHHHHHhcCCCCC-CEEE-eCCHHHHHHHHHHHhc--CCC---CEEEEcCCCChhHHHHHHHCCCeEEEeeCC-CC
Q 019868 131 SRRLRAALAKDSGLESD-HILV-GCGADELIDLIMRCVL--DPG---DKIVDCPPTFTMYEFDAAVNGAAVVKVPRK-SD 202 (334)
Q Consensus 131 ~~~lr~~lA~~~~~~~~-~I~~-t~G~~~~i~~~~~~l~--~~g---d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~-~~ 202 (334)
..+....+.++++++.+ .|++ -.|++..+..+...|+ +.| |-|+.-..+--.+.++-+......+..+.. -.
T Consensus 54 i~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ 133 (370)
T KOG2790|consen 54 INDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYT 133 (370)
T ss_pred HHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEeccccHHHHHHHHhhCCceEEeccccccc
Confidence 34556667778887543 4444 4556666655555565 334 566655443345665544433333333321 11
Q ss_pred --CCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccCCcCccCCCCchhhhcCCCcEEEEc
Q 019868 203 --FSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEAYTEFSGLESRMEWVKKHDNLIVLR 279 (334)
Q Consensus 203 --~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~ 279 (334)
--+|.+.++.. ++.+.++.|.---.-|.-++.-- +-.- +..+|.|-.-. |...+- +-....++..
T Consensus 134 ygkvPd~~~w~~~---~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSn-flSrpv-----Dvsk~gvi~a 201 (370)
T KOG2790|consen 134 YGKVPDPSTWELN---PDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSN-FLSRPV-----DVSKFGVIFA 201 (370)
T ss_pred cCcCCChhhcccC---CCccEEEEecCceeeceecCCCC---CCCCCCceEEEecccc-hhcCCc-----cchhcceEEe
Confidence 22455555432 45568888743333444432111 1111 67778887533 322111 1122347888
Q ss_pred CCchhhcccccchheeEcCHHHHHHHH
Q 019868 280 TFSKRAGLAGLRVGYGAFPLSIIEYLW 306 (334)
Q Consensus 280 S~SK~~gl~G~R~G~l~~~~~~i~~l~ 306 (334)
+.-|++|++| +-.+++.++++....
T Consensus 202 GAQKN~G~aG--~Tvvivr~dllg~~~ 226 (370)
T KOG2790|consen 202 GAQKNVGPAG--VTVVIVRKDLLGNAL 226 (370)
T ss_pred ccccccCccc--cEEEEEehhhhcccc
Confidence 9999999888 455667777776443
No 411
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=49.36 E-value=1.4e+02 Score=28.09 Aligned_cols=104 Identities=20% Similarity=0.249 Sum_probs=56.0
Q ss_pred HHHHHHHHHhcCCCCCCEEEeCC---------HHHHHHHHHHHh---cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 132 RRLRAALAKDSGLESDHILVGCG---------ADELIDLIMRCV---LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 132 ~~lr~~lA~~~~~~~~~I~~t~G---------~~~~i~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
...++.|-+.||...++|++-.- +...|..+++-| +++||..++.=-.|+. +.-.+..
T Consensus 88 ~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~LvfHYSGHGt----------r~~~~~g 157 (362)
T KOG1546|consen 88 HRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSLVFHYSGHGT----------RQPDTNG 157 (362)
T ss_pred HHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEEEEEecCCCC----------cCCCCCC
Confidence 45677777888888888776221 123445555544 3678877765444432 1111111
Q ss_pred CCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-----CCeEEEccCCcCc
Q 019868 200 KSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-----PILVVLDEAYTEF 259 (334)
Q Consensus 200 ~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-----~~~lIvDeay~~~ 259 (334)
++..+.| ..|+ --=+|--|.+++.+..+.+++- .+..|+|.++++.
T Consensus 158 De~dG~D-------------E~I~-P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGg 208 (362)
T KOG1546|consen 158 DEVDGYD-------------ETIV-PCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGG 208 (362)
T ss_pred CCCCCCc-------------ceee-cccccccccccchHHHHHHHhccCCCceEEEEeecccCCC
Confidence 1111121 1222 1125667777777777777764 4667777777653
No 412
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=48.97 E-value=20 Score=26.48 Aligned_cols=26 Identities=31% Similarity=0.493 Sum_probs=20.8
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEe
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVG 152 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t 152 (334)
|.+.-.++++.||+.++++++.|++.
T Consensus 11 ~Tpsr~ei~~klA~~~~~~~~~ivv~ 36 (84)
T PF01282_consen 11 PTPSRKEIREKLAAMLNVDPDLIVVF 36 (84)
T ss_dssp SS--HHHHHHHHHHHHTSTGCCEEEE
T ss_pred CCCCHHHHHHHHHHHhCCCCCeEEEe
Confidence 44557899999999999999998873
No 413
>PRK09189 uroporphyrinogen-III synthase; Validated
Probab=48.74 E-value=1.5e+02 Score=26.13 Aligned_cols=86 Identities=13% Similarity=0.161 Sum_probs=50.5
Q ss_pred hcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCC--CCCCCHHHHHHhccc
Q 019868 141 DSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKS--DFSLNVELIADAVER 216 (334)
Q Consensus 141 ~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~ 216 (334)
.+|+. .++...+..+++...+.....+|.+|+++...-. ......+..|+++..+.... .-..+.+.+.+.+.+
T Consensus 91 ~~G~~--~~~~~~~~~e~L~~~~~~~~~~~~~vL~~rg~~~r~~l~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~ 168 (240)
T PRK09189 91 ELGFR--HVIEGGGDGVRLAETVAAALAPTARLLYLAGRPRAPVFEDRLAAAGIPFRVAECYDMLPVMYSPATLSAILGG 168 (240)
T ss_pred HcCCC--CCcCCCCCHHHHHHHHHHhcCCCCcEEEeccCcccchhHHHHHhCCCeeEEEEEEEeecCCCChHHHHHHHhc
Confidence 34554 2344556666665555433457788888765543 34555666888877665211 112345566666665
Q ss_pred CCceEEEEeCCC
Q 019868 217 EKPKCIFLTSPN 228 (334)
Q Consensus 217 ~~~~~i~l~~p~ 228 (334)
.+...|++.+|.
T Consensus 169 ~~~d~i~f~S~~ 180 (240)
T PRK09189 169 APFDAVLLYSRV 180 (240)
T ss_pred CCCCEEEEeCHH
Confidence 567788877654
No 414
>PLN02591 tryptophan synthase
Probab=48.13 E-value=2.1e+02 Score=25.79 Aligned_cols=149 Identities=15% Similarity=0.161 Sum_probs=81.6
Q ss_pred HHHHhCCCCCCeeecCCC-CCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCH---HHHHH
Q 019868 86 LSIQLGRKPEDIVKIDAN-ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGA---DELID 160 (334)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~-~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~---~~~i~ 160 (334)
+...+...+.|+|.+++- ..|..--|.+.++-.+ +..+ ......-++-+.+.+...++ =|+.+--- .-++.
T Consensus 21 ~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G--~~~~~~~~~~~~~r~~~~~p--~ilm~Y~N~i~~~G~~ 96 (250)
T PLN02591 21 ALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKG--TTLDSVISMLKEVAPQLSCP--IVLFTYYNPILKRGID 96 (250)
T ss_pred HHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcC--CCHHHHHHHHHHHhcCCCCC--EEEEecccHHHHhHHH
Confidence 344454566788888874 2344444667666443 3221 11112233333343333321 13333211 22555
Q ss_pred HHHHHhcCCC-CEEEEcCCCCh---hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 161 LIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 161 ~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
.++..+.+-| |.|++++-.+. .+...++..|...+.+=.. ..+.+.+++..+ .....||+.+-...||.--.
T Consensus 97 ~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~P---tt~~~ri~~ia~-~~~gFIY~Vs~~GvTG~~~~ 172 (250)
T PLN02591 97 KFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTTP---TTPTERMKAIAE-ASEGFVYLVSSTGVTGARAS 172 (250)
T ss_pred HHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCC---CCCHHHHHHHHH-hCCCcEEEeeCCCCcCCCcC
Confidence 6666555555 89999998775 4556667789888776422 224456666554 45678888777778887433
Q ss_pred -HHHHHH
Q 019868 237 -DEDLLK 242 (334)
Q Consensus 237 -~~~l~~ 242 (334)
.+++.+
T Consensus 173 ~~~~~~~ 179 (250)
T PLN02591 173 VSGRVES 179 (250)
T ss_pred CchhHHH
Confidence 344444
No 415
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=47.62 E-value=38 Score=27.76 Aligned_cols=53 Identities=19% Similarity=0.193 Sum_probs=39.9
Q ss_pred CCHHHHHHhcccCCceEEEEeCCCCccccCCcHH-HHHHHHhC-----CC-eEEEccCCc
Q 019868 205 LNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLKILEM-----PI-LVVLDEAYT 257 (334)
Q Consensus 205 ~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~-~l~~l~~~-----~~-~lIvDeay~ 257 (334)
.|.+.+.+.+++.++..|++--|.|+.|...+.. ..+++++. ++ .++.||-..
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 5899999999878899999999999999988754 34555543 43 456787543
No 416
>PRK06194 hypothetical protein; Provisional
Probab=46.51 E-value=2.1e+02 Score=25.45 Aligned_cols=96 Identities=15% Similarity=0.078 Sum_probs=48.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HCCCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
..+++|.|+...-..+...|++.|.+|++.+-.-........ ..|.++..+..+ --|.+.+++.++. .+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D---~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD---VSDAAQVEALADAALERFGA 83 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHHHHHcCC
Confidence 356776666555556666678889888766543222222222 235566656533 2255566554431 24
Q ss_pred ceEEEEeCCCCccccC--CcHHHHHHHHh
Q 019868 219 PKCIFLTSPNNPDGSI--INDEDLLKILE 245 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~~--~~~~~l~~l~~ 245 (334)
...|+-+......|.. .+.+++++..+
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLG 112 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 5666655332222322 34555544433
No 417
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=45.84 E-value=2.3e+02 Score=25.68 Aligned_cols=159 Identities=15% Similarity=0.197 Sum_probs=80.0
Q ss_pred HHHHhCCCCCCeeecCCC-CCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHHHhcCCCCCCEEEeCCH---HHHHH
Q 019868 86 LSIQLGRKPEDIVKIDAN-ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALAKDSGLESDHILVGCGA---DELID 160 (334)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~-~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA~~~~~~~~~I~~t~G~---~~~i~ 160 (334)
+...+...+.|+|.+++- ..|..--|.+.++-.+ +..+ ......-++-+++.+...++ =|+.|--- .-++.
T Consensus 34 ~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g--~~~~~~~~~~~~~r~~~~~p--~vlm~Y~N~i~~~G~e 109 (263)
T CHL00200 34 ALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQG--INLNKILSILSEVNGEIKAP--IVIFTYYNPVLHYGIN 109 (263)
T ss_pred HHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcC--CCHHHHHHHHHHHhcCCCCC--EEEEecccHHHHhCHH
Confidence 344444456677777763 2234334666655443 2221 11112223333333333322 13333221 12444
Q ss_pred HHHHHhcCCC-CEEEEcCCCCh---hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCc
Q 019868 161 LIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIIN 236 (334)
Q Consensus 161 ~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~ 236 (334)
.++..+.+-| |.|++++-.+. .+...++.+|...+.+=... -+.+.++...+ .....||+.+-...||.--.
T Consensus 110 ~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~Pt---T~~eri~~i~~-~a~gFIY~vS~~GvTG~~~~ 185 (263)
T CHL00200 110 KFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPT---SSKSRIQKIAR-AAPGCIYLVSTTGVTGLKTE 185 (263)
T ss_pred HHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCC---CCHHHHHHHHH-hCCCcEEEEcCCCCCCCCcc
Confidence 4555455555 88998886664 34456677888877764322 24566666654 33447777666678888422
Q ss_pred -HHHHHHHHhC-----CCeEEE
Q 019868 237 -DEDLLKILEM-----PILVVL 252 (334)
Q Consensus 237 -~~~l~~l~~~-----~~~lIv 252 (334)
.+++.++.+. +..+.+
T Consensus 186 ~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 186 LDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred ccHHHHHHHHHHHHhcCCCEEE
Confidence 2334444432 555554
No 418
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=44.31 E-value=2.4e+02 Score=27.35 Aligned_cols=96 Identities=16% Similarity=0.166 Sum_probs=48.4
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (334)
Q Consensus 144 ~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~ 223 (334)
.....+++|.|+...-..+...+.+.|.+|++..-.-..........+..+..+..+ --|.+.+.+.+. +...++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~D---vsd~~~v~~~l~--~IDiLI 250 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQ---VGQEAALAELLE--KVDILI 250 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEee---CCCHHHHHHHhC--CCCEEE
Confidence 344567777665555555566677888887765422111111111122222233221 125667776664 577777
Q ss_pred EeCCCCccccCCcHHHHHHHHh
Q 019868 224 LTSPNNPDGSIINDEDLLKILE 245 (334)
Q Consensus 224 l~~p~NPtG~~~~~~~l~~l~~ 245 (334)
.+...++.+ -.+.+++++..+
T Consensus 251 nnAGi~~~~-~~s~e~~~~~~~ 271 (406)
T PRK07424 251 INHGINVHG-ERTPEAINKSYE 271 (406)
T ss_pred ECCCcCCCC-CCCHHHHHHHHH
Confidence 654334433 345666555443
No 419
>PRK06500 short chain dehydrogenase; Provisional
Probab=43.65 E-value=1.7e+02 Score=25.22 Aligned_cols=53 Identities=15% Similarity=0.092 Sum_probs=30.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
..+++|.++...-..+.+.|.+.|.+|++..-.-.......+..|.++..+..
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRA 59 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEe
Confidence 35666666665556667777788888876654333233333345666655553
No 420
>PRK05872 short chain dehydrogenase; Provisional
Probab=43.39 E-value=2.5e+02 Score=25.39 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=49.5
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHC--CCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
...+++|.|+...-..+...|.+.|.+|++..-.-.......+.. +.++..+..+ --|.+.+++.+++ .+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~D---v~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVAD---VTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEec---CCCHHHHHHHHHHHHHHcCC
Confidence 346777666665555566667788988887665443333333333 3445554332 1245555544431 34
Q ss_pred ceEEEEeCCCCcccc--CCcHHHHHHHHh
Q 019868 219 PKCIFLTSPNNPDGS--IINDEDLLKILE 245 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~l~~ 245 (334)
...++.+.-....+. ..+.+++++..+
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~ 114 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVID 114 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHH
Confidence 566665422222222 235566655443
No 421
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=43.10 E-value=2.6e+02 Score=25.39 Aligned_cols=152 Identities=16% Similarity=0.194 Sum_probs=76.9
Q ss_pred HHHHhCCCCCCeeecCCC-CCCCCCCHHHHHHHhc-CcCCCCCCCcChHHHHHHHH-HhcCCCCCCEEEeCCHH---HHH
Q 019868 86 LSIQLGRKPEDIVKIDAN-ENPYGPPPEVREALGQ-LKFPYIYPDPESRRLRAALA-KDSGLESDHILVGCGAD---ELI 159 (334)
Q Consensus 86 ~~~~~~~~~~~~i~l~~~-~~~~~~~~~v~~al~~-~~~~~~Yp~~g~~~lr~~lA-~~~~~~~~~I~~t~G~~---~~i 159 (334)
+...+...+.|+|.+++- .+|..--|.+.++-.+ +..+ +.....-++-+.+. +...++ =|+.|-=-. -++
T Consensus 29 ~~~~l~~~GaD~iEiGiPfSDP~ADGpvIq~A~~rAL~~G--~~~~~~~~~~~~ir~~~~~~p--ivlm~Y~N~i~~~G~ 104 (259)
T PF00290_consen 29 ILKALEEAGADIIEIGIPFSDPVADGPVIQKASQRALKNG--FTLEKIFELVKEIRKKEPDIP--IVLMTYYNPIFQYGI 104 (259)
T ss_dssp HHHHHHHTTBSSEEEE--SSSCTTSSHHHHHHHHHHHHTT----HHHHHHHHHHHHHHCTSSE--EEEEE-HHHHHHH-H
T ss_pred HHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC--CCHHHHHHHHHHHhccCCCCC--EEEEeeccHHhccch
Confidence 333344455677777663 2344444666666543 3221 11112223333333 222221 233332111 233
Q ss_pred HHHHHHhcCCC-CEEEEcCCCCh---hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCC
Q 019868 160 DLIMRCVLDPG-DKIVDCPPTFT---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSII 235 (334)
Q Consensus 160 ~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~ 235 (334)
..++..+.+-| |.+++++--+. .+...+...|...+.+=.. ..+.+.+++..+ .....||+.+-...||.-.
T Consensus 105 e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~p---~t~~~Ri~~i~~-~a~gFiY~vs~~GvTG~~~ 180 (259)
T PF00290_consen 105 ERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVAP---TTPEERIKKIAK-QASGFIYLVSRMGVTGSRT 180 (259)
T ss_dssp HHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEET---TS-HHHHHHHHH-H-SSEEEEESSSSSSSTTS
T ss_pred HHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEECC---CCCHHHHHHHHH-hCCcEEEeeccCCCCCCcc
Confidence 44444443444 88999997775 4555667789988876422 124566666554 4567899888888899975
Q ss_pred c-HHHHHHHHh
Q 019868 236 N-DEDLLKILE 245 (334)
Q Consensus 236 ~-~~~l~~l~~ 245 (334)
. ..++.+.++
T Consensus 181 ~~~~~l~~~i~ 191 (259)
T PF00290_consen 181 ELPDELKEFIK 191 (259)
T ss_dssp SCHHHHHHHHH
T ss_pred cchHHHHHHHH
Confidence 4 344555544
No 422
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=41.65 E-value=2.5e+02 Score=24.76 Aligned_cols=100 Identities=10% Similarity=0.005 Sum_probs=50.1
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhccc---
Q 019868 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER--- 216 (334)
Q Consensus 143 ~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~--- 216 (334)
.++...+++|.|+...-..+...|...|.+|++..-.-....... +..|.++..++.+- -|.+.+++.+.+
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV---TDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHHH
Confidence 333345666666655555566667788877776653332222222 22455666665432 255555554432
Q ss_pred --CCceEEEEeCCCCccc--cCCcHHHHHHHHh
Q 019868 217 --EKPKCIFLTSPNNPDG--SIINDEDLLKILE 245 (334)
Q Consensus 217 --~~~~~i~l~~p~NPtG--~~~~~~~l~~l~~ 245 (334)
.+...++.+..-...+ ...+.+++++..+
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 116 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVID 116 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2456776653221111 1335566655443
No 423
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=41.24 E-value=1.6e+02 Score=25.63 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=23.6
Q ss_pred HHHHHhcccCCceEEEEeCCCCccccCC-cHHHHHHHHh
Q 019868 208 ELIADAVEREKPKCIFLTSPNNPDGSII-NDEDLLKILE 245 (334)
Q Consensus 208 ~~l~~~l~~~~~~~i~l~~p~NPtG~~~-~~~~l~~l~~ 245 (334)
.++.+++.+.+..+|+-.-..|+||.-+ +.+.+.+|+.
T Consensus 126 ~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~ 164 (232)
T KOG4589|consen 126 RKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCD 164 (232)
T ss_pred HHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHH
Confidence 3444455433344554447789999865 6777777775
No 424
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=40.04 E-value=95 Score=31.73 Aligned_cols=96 Identities=17% Similarity=0.221 Sum_probs=57.2
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCH---HHHHHhcccCCceEE
Q 019868 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNV---ELIADAVEREKPKCI 222 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~---~~l~~~l~~~~~~~i 222 (334)
|+.|.|+...-..+-. ++.+|-++ +.+|--....... +..|.....+. ..++. ..+...+.....+++
T Consensus 38 vmPTGgGKSlCyQiPA-ll~~G~TL-VVSPLiSLM~DQV~~l~~~Gi~A~~ln----S~l~~~e~~~v~~~l~~g~~klL 111 (590)
T COG0514 38 VMPTGGGKSLCYQIPA-LLLEGLTL-VVSPLISLMKDQVDQLEAAGIRAAYLN----STLSREERQQVLNQLKSGQLKLL 111 (590)
T ss_pred EccCCCCcchHhhhHH-HhcCCCEE-EECchHHHHHHHHHHHHHcCceeehhh----cccCHHHHHHHHHHHhcCceeEE
Confidence 4558888888777776 56677554 4456665554433 34776666554 23343 334444444567888
Q ss_pred EEe--CCCCccccCCcHHHHHHHHhC-CCeEEEccCCc
Q 019868 223 FLT--SPNNPDGSIINDEDLLKILEM-PILVVLDEAYT 257 (334)
Q Consensus 223 ~l~--~p~NPtG~~~~~~~l~~l~~~-~~~lIvDeay~ 257 (334)
+++ .-.+| .-++.|.+. -.++++||||.
T Consensus 112 yisPErl~~~-------~f~~~L~~~~i~l~vIDEAHC 142 (590)
T COG0514 112 YISPERLMSP-------RFLELLKRLPISLVAIDEAHC 142 (590)
T ss_pred EECchhhcCh-------HHHHHHHhCCCceEEechHHH
Confidence 875 11333 444445444 57899999985
No 425
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=39.62 E-value=2.5e+02 Score=24.94 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=50.2
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCCC--CCCCHHHHHHhcccCCceEEEE
Q 019868 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVEREKPKCIFL 224 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~~i~l 224 (334)
++...+..+++...+......|++|++....-. .........|+++..++.... -..+.+.+...+...+..+|++
T Consensus 102 ~~p~~~~~~~l~~~l~~~~~~~~~vl~~~~~~~r~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~d~v~f 181 (248)
T COG1587 102 FIPEDGDSEGLLEELPELLKGGKRVLILRGNGGREVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKLGEVDAVVF 181 (248)
T ss_pred cCCCccchHHHHHHhhhhccCCCeEEEEcCCCchHHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHhCCCCEEEE
Confidence 333467777777777766666789988765443 355556668999988873221 1223445555565567788887
Q ss_pred eCC
Q 019868 225 TSP 227 (334)
Q Consensus 225 ~~p 227 (334)
+++
T Consensus 182 tS~ 184 (248)
T COG1587 182 TSS 184 (248)
T ss_pred eCH
Confidence 654
No 426
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=39.08 E-value=2e+02 Score=23.01 Aligned_cols=138 Identities=13% Similarity=0.166 Sum_probs=73.4
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCC-EEEEcCCC--ChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----C
Q 019868 149 ILVGCGADELIDLIMRCVLDPGD-KIVDCPPT--FTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd-~Vl~~~p~--y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~ 217 (334)
+++|.|+...-..+.+.|++.|+ .|++.... ....... ....|.++..++.+- -|.+.+++.++. .
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDL---SDPESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESET---TSHHHHHHHHHHHHHHHS
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccc---cccccccccccccccccc
Confidence 56666666666666777777765 54544444 2323322 234678888877532 255565555432 3
Q ss_pred CceEEEEeCCCCcccc--CCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCchhhcccccchhee
Q 019868 218 KPKCIFLTSPNNPDGS--IINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSKRAGLAGLRVGYG 295 (334)
Q Consensus 218 ~~~~i~l~~p~NPtG~--~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK~~gl~G~R~G~l 295 (334)
+...++.+....+.+. -.+.+++++..+.++. ..+.......+ .....++++.|.+-..+.+| +..|.
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~-------~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~-~~~Y~ 149 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLF-------GPFLLAKALLP--QGGGKIVNISSIAGVRGSPG-MSAYS 149 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTH-------HHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTT-BHHHH
T ss_pred cccccccccccccccccccccchhhhhccccccc-------eeeeeeehhee--ccccceEEecchhhccCCCC-ChhHH
Confidence 4567776644333333 3356888887765211 11110001111 34567888888887766544 34554
Q ss_pred EcCH
Q 019868 296 AFPL 299 (334)
Q Consensus 296 ~~~~ 299 (334)
.+..
T Consensus 150 aska 153 (167)
T PF00106_consen 150 ASKA 153 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 427
>COG2004 RPS24A Ribosomal protein S24E [Translation, ribosomal structure and biogenesis]
Probab=38.80 E-value=39 Score=26.21 Aligned_cols=26 Identities=27% Similarity=0.548 Sum_probs=22.2
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEe
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVG 152 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t 152 (334)
|.|.-.++|+.||+.++++.+.|++-
T Consensus 30 ~TPSr~evrekla~~l~~d~e~VvV~ 55 (107)
T COG2004 30 PTPSRKEVREKLAAMLGADKELVVVD 55 (107)
T ss_pred CCCCHHHHHHHHHHHHCCCcceEEEE
Confidence 45567899999999999999988874
No 428
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=38.67 E-value=1.8e+02 Score=22.36 Aligned_cols=16 Identities=19% Similarity=0.453 Sum_probs=8.2
Q ss_pred EEEeCCHHHHHHHHHH
Q 019868 149 ILVGCGADELIDLIMR 164 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~ 164 (334)
++++.|.+..+..-+.
T Consensus 17 ~i~g~g~s~~~a~~~~ 32 (139)
T cd05013 17 YIFGVGSSGLVAEYLA 32 (139)
T ss_pred EEEEcCchHHHHHHHH
Confidence 3445666555554444
No 429
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=37.61 E-value=2.8e+02 Score=24.25 Aligned_cols=97 Identities=8% Similarity=0.020 Sum_probs=48.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh-hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCce
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPK 220 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~ 220 (334)
..+++|.|+...-..+...|++.|.+|++....-. ......+..|.++..+..+- -|.+.+++.++. .+..
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADL---IQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCC---CCHHHHHHHHHHHHHHcCCCC
Confidence 35666666665556666677889988876543211 11122233566665555321 244555444431 2456
Q ss_pred EEEEeCCCCcccc--CCcHHHHHHHHhC
Q 019868 221 CIFLTSPNNPDGS--IINDEDLLKILEM 246 (334)
Q Consensus 221 ~i~l~~p~NPtG~--~~~~~~l~~l~~~ 246 (334)
.++.+.-....+. ..+.+++++..+.
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~v 113 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVINI 113 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHhee
Confidence 6654422212222 2356777665553
No 430
>PRK06139 short chain dehydrogenase; Provisional
Probab=37.60 E-value=2.3e+02 Score=26.42 Aligned_cols=96 Identities=9% Similarity=0.096 Sum_probs=46.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
..+++|.++...-..+...|...|.+|++..-.-..... .++..|.++..++.|- -|.+++++.++. .+
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDV---TDADQVKALATQAASFGGR 84 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC---CCHHHHHHHHHHHHHhcCC
Confidence 345555544444444555577888888776533222222 2233566666555321 245555554421 24
Q ss_pred ceEEEEeCCCCcccc--CCcHHHHHHHHh
Q 019868 219 PKCIFLTSPNNPDGS--IINDEDLLKILE 245 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~l~~ 245 (334)
...++-|.-....|. ..+.++++++.+
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~ 113 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQ 113 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 566654432222222 224455554443
No 431
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=37.06 E-value=2.8e+02 Score=24.14 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=42.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceE
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~ 221 (334)
..+++|.|+...-..+.+.|.+.|.+|++.+..-..........+.++..+..+ --|.+.+++.++. .+...
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLD---VTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 356776666666666667778889888877655544444444334445555432 1244555544431 24566
Q ss_pred EEEe
Q 019868 222 IFLT 225 (334)
Q Consensus 222 i~l~ 225 (334)
++.+
T Consensus 84 li~~ 87 (257)
T PRK07067 84 LFNN 87 (257)
T ss_pred EEEC
Confidence 6655
No 432
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=37.03 E-value=1.5e+02 Score=28.33 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=46.6
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868 148 HILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
.|+-.+++..++.++..+- ..| -.|+++.-.-..-....+.+|++++.++...+..-..+...+..+ +++..++++
T Consensus 113 ~vV~aSsGN~G~alA~~a~-~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~-~~~~~~~~~ 190 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAA-MKGYKMILTMPSYTSLERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLE-STPDAFMLQ 190 (368)
T ss_pred EEEEeCCchHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHH-hcCCCCccC
Confidence 4666777777777766642 234 345555443345566777899999998742221123344444443 344566655
Q ss_pred CCCCccc
Q 019868 226 SPNNPDG 232 (334)
Q Consensus 226 ~p~NPtG 232 (334)
..+||.+
T Consensus 191 q~~np~~ 197 (368)
T PLN02556 191 QFSNPAN 197 (368)
T ss_pred CCCCHHH
Confidence 4456643
No 433
>PRK07024 short chain dehydrogenase; Provisional
Probab=36.99 E-value=2.9e+02 Score=24.19 Aligned_cols=33 Identities=6% Similarity=0.052 Sum_probs=22.9
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTF 180 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y 180 (334)
.+++|.|+...-..+...|.+.|.+|++.+-.-
T Consensus 4 ~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~ 36 (257)
T PRK07024 4 KVFITGASSGIGQALAREYARQGATLGLVARRT 36 (257)
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 577777666666666667778898888766443
No 434
>cd06578 HemD Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.
Probab=36.60 E-value=2e+02 Score=24.66 Aligned_cols=77 Identities=16% Similarity=0.056 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHHHhcCCCCEEEEcCCCC--hhHHHHHHHCCCeEEEeeCCCC-CCCCHHHHHHhcccCCceEEEEeCCCC
Q 019868 153 CGADELIDLIMRCVLDPGDKIVDCPPTF--TMYEFDAAVNGAAVVKVPRKSD-FSLNVELIADAVEREKPKCIFLTSPNN 229 (334)
Q Consensus 153 ~G~~~~i~~~~~~l~~~gd~Vl~~~p~y--~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~~i~l~~p~N 229 (334)
.+..+.+...+...-..+.+|++....- ..........|+++..++.... ...+.+...+.+.+.....|++++++.
T Consensus 105 ~~~~~~L~~~i~~~~~~~~~il~~~g~~~~~~l~~~L~~~g~~v~~~~~Y~~~~~~~~~~~~~~l~~~~~~~iiftS~~~ 184 (239)
T cd06578 105 EGDSEGLLELLELQDGKGKRILRPRGGRAREDLAEALRERGAEVDEVEVYRTVPPDLDAELLELLEEGAIDAVLFTSPST 184 (239)
T ss_pred ccCHHHHHHHHHhcCCCCCEEEEEcCcchhHHHHHHHHHCCCEEEEEEEEEEECCCCcHHHHHHHHcCCCcEEEEeCHHH
Confidence 3444444444443223567777776544 3455555567888887772111 111114444555433344677666653
No 435
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=36.54 E-value=2.7e+02 Score=23.82 Aligned_cols=77 Identities=16% Similarity=0.067 Sum_probs=40.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceE
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~ 221 (334)
..+++|.|+...-..+...|++.|..|++...............+.++..++.+ --|.+.+++.+++ .+...
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPAN---LSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEcc---CCCHHHHHHHHHHHHHHcCCCCE
Confidence 356666555555555667778888887766544333333333334444444432 1244555544321 24666
Q ss_pred EEEeC
Q 019868 222 IFLTS 226 (334)
Q Consensus 222 i~l~~ 226 (334)
++-+.
T Consensus 84 vi~~a 88 (245)
T PRK12936 84 LVNNA 88 (245)
T ss_pred EEECC
Confidence 66553
No 436
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=35.84 E-value=2.9e+02 Score=25.62 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=43.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868 147 DHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
..|+..+++..+..++..+-. +-.-.|+++...-..-....+.+|++++.++.+ +.-+...+.+.+.+..+...++.
T Consensus 52 ~~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~ 129 (316)
T cd06448 52 VHVVCSSGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV--WWEADNYLREELAENDPGPVYVH 129 (316)
T ss_pred CeEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc--hHHHHHHHHHHHHhccCCcEEeC
Confidence 356666666666666554322 222345555543344566777899999988632 11112233333432333556655
Q ss_pred CCCCccc
Q 019868 226 SPNNPDG 232 (334)
Q Consensus 226 ~p~NPtG 232 (334)
.-+||.+
T Consensus 130 ~~~n~~~ 136 (316)
T cd06448 130 PFDDPLI 136 (316)
T ss_pred CCCCchh
Confidence 3345544
No 437
>PF12846 AAA_10: AAA-like domain
Probab=35.83 E-value=1e+02 Score=27.65 Aligned_cols=49 Identities=18% Similarity=0.321 Sum_probs=38.3
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCC
Q 019868 152 GCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKS 201 (334)
Q Consensus 152 t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~ 201 (334)
++|=+..+..++..+...|..|++.+|. ..|...++..|.+++.+....
T Consensus 11 GsGKT~~~~~l~~~~~~~g~~~~i~D~~-g~~~~~~~~~~~~~i~~~~~~ 59 (304)
T PF12846_consen 11 GSGKTTLLKNLLEQLIRRGPRVVIFDPK-GDYSPLARALGGQYIDIDPGD 59 (304)
T ss_pred CCcHHHHHHHHHHHHHHcCCCEEEEcCC-chHHHHHHhcCceEEEeecCC
Confidence 4677777777777788889889888988 777778888888888776433
No 438
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=35.46 E-value=2.9e+02 Score=23.78 Aligned_cols=78 Identities=15% Similarity=0.067 Sum_probs=40.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHC--CCeEEEeeCCCCCCCCHHHHHHhccc-----CCc
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVN--GAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~--G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~ 219 (334)
..+++|.|+...-..+.+.|++.|.+|++..-.-.......... +.++..+..+ -.|.+.+.+.+++ .+.
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D---~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAAD---VSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECC---CCCHHHHHHHHHHHHHHhCCC
Confidence 45677665555555566677788877776543332222222221 3444444432 2355666555432 246
Q ss_pred eEEEEeCC
Q 019868 220 KCIFLTSP 227 (334)
Q Consensus 220 ~~i~l~~p 227 (334)
..|+.+..
T Consensus 83 d~vi~~ag 90 (251)
T PRK07231 83 DILVNNAG 90 (251)
T ss_pred CEEEECCC
Confidence 67776543
No 439
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=35.39 E-value=1.4e+02 Score=26.14 Aligned_cols=65 Identities=17% Similarity=0.184 Sum_probs=41.3
Q ss_pred CEEEeCCHHHHHHHHHHHh--cCCCCEEEEcCCCChhHHHH-----HHHCCCeEEEeeCCCCCCCCHHHHHHhcccCC
Q 019868 148 HILVGCGADELIDLIMRCV--LDPGDKIVDCPPTFTMYEFD-----AAVNGAAVVKVPRKSDFSLNVELIADAVEREK 218 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l--~~~gd~Vl~~~p~y~~~~~~-----~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~ 218 (334)
-|+.|+|.++.-....... +.++|+++ ..|.|..+... .-..|+.++.++ .+|++.+.+.+++.+
T Consensus 154 ~l~yTsg~~~~~~~~~~~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~-----rFd~~~~l~~i~~~~ 225 (227)
T TIGR03089 154 LVAGGGEWTGAELVAAARAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVT-----HPDPARLDQIAETER 225 (227)
T ss_pred eeeccccccHHHHHHHHhhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEec-----CCCHHHHHHHHHhhc
Confidence 4666877664433222222 46889999 88877644432 223799888874 458889888887544
No 440
>PLN03013 cysteine synthase
Probab=34.78 E-value=2e+02 Score=28.23 Aligned_cols=83 Identities=12% Similarity=0.057 Sum_probs=45.6
Q ss_pred CEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeC
Q 019868 148 HILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTS 226 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~ 226 (334)
.|+-.+++..++.++..+-. +-.-.|++++-.-..-....+.+|++++.++...++.-..+..++..+ +....++++.
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~-~~~g~~~~~q 255 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILK-NTPDAYMLQQ 255 (429)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHh-hcCCeEeCCC
Confidence 36666677777776665432 222455566655556667888899999998743221111233333333 2234555543
Q ss_pred CCCcc
Q 019868 227 PNNPD 231 (334)
Q Consensus 227 p~NPt 231 (334)
-+||.
T Consensus 256 y~Np~ 260 (429)
T PLN03013 256 FDNPA 260 (429)
T ss_pred CCCHH
Confidence 34553
No 441
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=34.42 E-value=3.3e+02 Score=24.10 Aligned_cols=148 Identities=12% Similarity=0.176 Sum_probs=77.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEE----cCC--CC-------hhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcc
Q 019868 149 ILVGCGADELIDLIMRCVLDPGDKIVD----CPP--TF-------TMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVE 215 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd~Vl~----~~p--~y-------~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~ 215 (334)
++..+|+......+..+.-+ -+.+.+ +.. .| .....+++..|..++.++......--.+++.+.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l~ 82 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGILH 82 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHHH
Confidence 56679999998888887655 443322 111 11 23345677789988776633222223566767666
Q ss_pred cCCceEEEEeCCCCccccCCcHHHH---HHHHhC-CCeEEEccCCcCccCCCC--chh-hhcCCCcEEEEcCCchhhccc
Q 019868 216 REKPKCIFLTSPNNPDGSIINDEDL---LKILEM-PILVVLDEAYTEFSGLES--RME-WVKKHDNLIVLRTFSKRAGLA 288 (334)
Q Consensus 216 ~~~~~~i~l~~p~NPtG~~~~~~~l---~~l~~~-~~~lIvDeay~~~~~~~~--~~~-~~~~~~~~i~i~S~SK~~gl~ 288 (334)
+.+...|+ +|.+.+..+. +++++. |+.. +.+++..+. .+. .+...-..+++ +.++ .|+.
T Consensus 83 ~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~-----~~PLW~~~~~~ll~e~i~~G~~aiIv-~v~a-~gL~ 148 (223)
T TIGR00290 83 TLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKS-----FAPLWHRDPEKLMEEFVEEKFEARII-AVAA-EGLD 148 (223)
T ss_pred HcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEE-----eccccCCCHHHHHHHHHHcCCeEEEE-EEec-CCCC
Confidence 44566666 7888775444 444544 5543 445554321 121 22222223332 2222 2333
Q ss_pred ccchheeEcCHHHHHHHHHhcCCC
Q 019868 289 GLRVGYGAFPLSIIEYLWRAKQPY 312 (334)
Q Consensus 289 G~R~G~l~~~~~~i~~l~~~~~~~ 312 (334)
.--+| -..++++++.+.+....+
T Consensus 149 ~~~LG-r~i~~e~i~~L~~~~~~~ 171 (223)
T TIGR00290 149 ESWLG-RRIDRKMIDELKKLNEKY 171 (223)
T ss_pred hHHcC-CcccHHHHHHHHHHHhcc
Confidence 32233 134677888777654333
No 442
>PRK06482 short chain dehydrogenase; Provisional
Probab=33.93 E-value=3.3e+02 Score=24.03 Aligned_cols=75 Identities=9% Similarity=0.073 Sum_probs=38.5
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
.+++|.|+...-..+...|.+.|..|++..-............+.++..+..+- -|.+.+++.+++ .+...|
T Consensus 4 ~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDV---TDSAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 467766655555556666788888887655443323322222333444443221 244555544321 245666
Q ss_pred EEe
Q 019868 223 FLT 225 (334)
Q Consensus 223 ~l~ 225 (334)
+.+
T Consensus 81 i~~ 83 (276)
T PRK06482 81 VSN 83 (276)
T ss_pred EEC
Confidence 655
No 443
>PRK08339 short chain dehydrogenase; Provisional
Probab=33.82 E-value=3.4e+02 Score=24.02 Aligned_cols=32 Identities=6% Similarity=0.049 Sum_probs=20.6
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPT 179 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~ 179 (334)
.+++|.|+...-..+...|.+.|.+|++..-.
T Consensus 10 ~~lItGas~gIG~aia~~l~~~G~~V~~~~r~ 41 (263)
T PRK08339 10 LAFTTASSKGIGFGVARVLARAGADVILLSRN 41 (263)
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCC
Confidence 45665555555555666678889888876543
No 444
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=33.64 E-value=22 Score=30.30 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=48.1
Q ss_pred eCCHHHHHHHHHHHhcCCCC-EEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCc
Q 019868 152 GCGADELIDLIMRCVLDPGD-KIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNP 230 (334)
Q Consensus 152 t~G~~~~i~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NP 230 (334)
+.|=+.++.+++..+...|. .|++..|...+.....+........+..+. +... .... +.....++.
T Consensus 7 GRGKSa~lGl~~a~l~~~~~~~I~vtAP~~~~~~~lf~~~~~~l~~~~~~~------~~~~-----~~~~-~~~~~~~~~ 74 (177)
T PF05127_consen 7 GRGKSAALGLAAAALIQKGKIRILVTAPSPENVQTLFEFAEKGLKALGYKE------EKKK-----RIGQ-IIKLRFNKQ 74 (177)
T ss_dssp TSSHHHHHHHCCCCSSS-----EEEE-SS--S-HHHHHCC--------------------------------------CC
T ss_pred CCCHHHHHHHHHHHHHHhcCceEEEecCCHHHHHHHHHHHHhhcccccccc------cccc-----cccc-ccccccccc
Confidence 35777788777777777765 899999999988887776543333222111 0000 0000 011111233
Q ss_pred cccCCcHHHHHHHHhCCCeEEEccCCcCccCCCCchhhhcCCCcEEEEcCCch
Q 019868 231 DGSIINDEDLLKILEMPILVVLDEAYTEFSGLESRMEWVKKHDNLIVLRTFSK 283 (334)
Q Consensus 231 tG~~~~~~~l~~l~~~~~~lIvDeay~~~~~~~~~~~~~~~~~~~i~i~S~SK 283 (334)
+=..+.++++.......-++|+||+=+-- -+-....+..+.++++..|.+-
T Consensus 75 ~i~f~~Pd~l~~~~~~~DlliVDEAAaIp--~p~L~~ll~~~~~vv~stTi~G 125 (177)
T PF05127_consen 75 RIEFVAPDELLAEKPQADLLIVDEAAAIP--LPLLKQLLRRFPRVVFSTTIHG 125 (177)
T ss_dssp C--B--HHHHCCT----SCEEECTGGGS---HHHHHHHHCCSSEEEEEEEBSS
T ss_pred eEEEECCHHHHhCcCCCCEEEEechhcCC--HHHHHHHHhhCCEEEEEeeccc
Confidence 33444555554443333578999974410 0011223446777777666665
No 445
>PRK08263 short chain dehydrogenase; Provisional
Probab=33.50 E-value=3.4e+02 Score=24.02 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=37.5
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
.|++|.|+...-..+...|.+.|..|++..-.-..........+..+..+..+- -|.+.+++.++. .+...+
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDV---TDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 466665555455555666778888777654332222223333343444444321 244555444331 245666
Q ss_pred EEe
Q 019868 223 FLT 225 (334)
Q Consensus 223 ~l~ 225 (334)
+.+
T Consensus 82 i~~ 84 (275)
T PRK08263 82 VNN 84 (275)
T ss_pred EEC
Confidence 655
No 446
>PRK08589 short chain dehydrogenase; Validated
Probab=33.30 E-value=3.5e+02 Score=24.01 Aligned_cols=94 Identities=10% Similarity=0.064 Sum_probs=46.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHH---HCCCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAA---VNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
..+++|.|+...-..+...|++.|.+|++..-. ........ ..+.++..+..+- -|.+.+++.++. .+
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDI---SDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeec---CCHHHHHHHHHHHHHHcCC
Confidence 356666655555555566778889888877655 43332222 2354555554321 133444433321 24
Q ss_pred ceEEEEeCCC-Ccccc--CCcHHHHHHHH
Q 019868 219 PKCIFLTSPN-NPDGS--IINDEDLLKIL 244 (334)
Q Consensus 219 ~~~i~l~~p~-NPtG~--~~~~~~l~~l~ 244 (334)
...++.+... .+.+. ..+.+++++..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIM 111 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHH
Confidence 5555544222 22222 33566665443
No 447
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=32.93 E-value=3.7e+02 Score=24.18 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=56.2
Q ss_pred CCEEEeCCHHHHHHHHHHHh---------c-------C-CCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCCCCCCCH
Q 019868 147 DHILVGCGADELIDLIMRCV---------L-------D-PGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSDFSLNV 207 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l---------~-------~-~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~~~~~d~ 207 (334)
.+|++|.|+...-... ..+ + + +++.++.-.|-|. .-...++.++++++-.+...+- --.
T Consensus 128 ~~vllttGsk~l~~f~-~~~~~~r~~~RvLP~~~s~~g~~~~~iiam~gPfs~e~n~aL~~~~~i~~lVtK~SG~~-g~~ 205 (248)
T PRK08057 128 RRVLLTTGRQPLAHFA-AILPEHRLLVRVLPPPEVLLGLPRAEIIALRGPFSLELERALLRQHRIDVVVTKNSGGA-GTE 205 (248)
T ss_pred CCEEEecCcchHHHHh-hcCCCCEEEEEECCCchhcCCCChhhEEEeeCCCCHHHHHHHHHHcCCCEEEEcCCCch-hhH
Confidence 5899999997643332 111 0 0 1233443334333 2334566688888877643221 234
Q ss_pred HHHHHhcccCCceEEEEeCCCCcc--ccCCcHHHHHHHHh
Q 019868 208 ELIADAVEREKPKCIFLTSPNNPD--GSIINDEDLLKILE 245 (334)
Q Consensus 208 ~~l~~~l~~~~~~~i~l~~p~NPt--G~~~~~~~l~~l~~ 245 (334)
++++.+.+ -+..+|+|..|.-|. ..+.+.+++.+.++
T Consensus 206 eKi~AA~~-lgi~vivI~RP~~~~~~~~~~~~~e~~~~l~ 244 (248)
T PRK08057 206 AKLEAARE-LGIPVVMIARPALPYADREFEDVAELVAWLR 244 (248)
T ss_pred HHHHHHHH-cCCeEEEEeCCCCCCCCcccCCHHHHHHHHH
Confidence 66666554 678899999886443 35568888877654
No 448
>PRK05928 hemD uroporphyrinogen-III synthase; Reviewed
Probab=32.85 E-value=2.3e+02 Score=24.56 Aligned_cols=87 Identities=14% Similarity=0.081 Sum_probs=44.6
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCh--hHHHHHHHCCCeEEEeeCCCC--CCCCHHHHHHhcccC
Q 019868 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFT--MYEFDAAVNGAAVVKVPRKSD--FSLNVELIADAVERE 217 (334)
Q Consensus 142 ~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~G~~v~~v~~~~~--~~~d~~~l~~~l~~~ 217 (334)
+|+.++ ++...+..+.+...+......|.+|+++.+.-. ......+..|+++..++..+. -..+.+.....+...
T Consensus 98 ~G~~~~-~~~~~~~~~~l~~~l~~~~~~~~~ili~~~~~~~~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~ 176 (249)
T PRK05928 98 LGGKVV-FVPEDGESSELLLELPELLLKGKRVLYLRGNGGREVLGDTLEERGAEVDECEVYERVPPKLDGAELLARLQSG 176 (249)
T ss_pred cCCCcc-ccCCCCcChHHHHhChhhhcCCCEEEEECCCCCHHHHHHHHHHCCCEEeEEEEEEeeCCCCChHHHHHHHHhC
Confidence 455432 233344444444433333235788888877654 344555668888888773211 011223333322224
Q ss_pred CceEEEEeCCCC
Q 019868 218 KPKCIFLTSPNN 229 (334)
Q Consensus 218 ~~~~i~l~~p~N 229 (334)
+...|++++|+.
T Consensus 177 ~~d~ivftS~~~ 188 (249)
T PRK05928 177 EVDAVIFTSPST 188 (249)
T ss_pred CCCEEEECCHHH
Confidence 677888776653
No 449
>PRK06114 short chain dehydrogenase; Provisional
Probab=32.51 E-value=3.4e+02 Score=23.67 Aligned_cols=100 Identities=10% Similarity=0.089 Sum_probs=49.2
Q ss_pred CCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC-hhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc--
Q 019868 143 GLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF-TMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-- 216 (334)
Q Consensus 143 ~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y-~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-- 216 (334)
.++...+++|.|+...-..+.+.|.+.|.+|++....- ..... ..+..|.++..++.+- -|.+.+++.+++
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~i~~~~~~~~ 81 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADV---TSKADLRAAVARTE 81 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCC---CCHHHHHHHHHHHH
Confidence 34444567776666555666667788888877654321 11122 2223455555555321 244555544431
Q ss_pred ---CCceEEEEeCC-CCc-cccCCcHHHHHHHHh
Q 019868 217 ---EKPKCIFLTSP-NNP-DGSIINDEDLLKILE 245 (334)
Q Consensus 217 ---~~~~~i~l~~p-~NP-tG~~~~~~~l~~l~~ 245 (334)
.+...++.+.. .++ .-...+.+++++..+
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 115 (254)
T PRK06114 82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMD 115 (254)
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHh
Confidence 23556654422 121 112235566665544
No 450
>PF13552 DUF4127: Protein of unknown function (DUF4127)
Probab=32.44 E-value=4.7e+02 Score=26.21 Aligned_cols=33 Identities=33% Similarity=0.465 Sum_probs=23.1
Q ss_pred HHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhc
Q 019868 133 RLRAALAKDSGLESDHILVGCGADELIDLIMRCVL 167 (334)
Q Consensus 133 ~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~ 167 (334)
.|++.+. .+++ .+.|.+.+|+.|.-..++.-..
T Consensus 216 ~L~~~~~-~~~l-~~rv~i~pGADEvg~~LlaRa~ 248 (497)
T PF13552_consen 216 ELEAYIE-ELGL-SDRVMIYPGADEVGLLLLARAY 248 (497)
T ss_pred HHHHHHH-hcCC-CCceeeeCChhHHHHHHHHHHH
Confidence 3443333 3566 7899999999998877776554
No 451
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=32.13 E-value=2.5e+02 Score=24.64 Aligned_cols=52 Identities=25% Similarity=0.236 Sum_probs=28.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEee
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVP 198 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~ 198 (334)
..+++|.|+...-..+.+.|.+.|.+|++.+-.-..........+.++..+.
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~ 57 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVE 57 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEE
Confidence 4566665555444556667788998888765333323333233344454444
No 452
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=31.96 E-value=1.4e+02 Score=24.25 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=37.9
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcH-HHHHHHHh----C-C-CeEEEccCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIIND-EDLLKILE----M-P-ILVVLDEAYT 257 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~-~~l~~l~~----~-~-~~lIvDeay~ 257 (334)
..+.+.+.+.+++.++..|++--|-|+.|..-+. ..++++++ . + -+..+||.|.
T Consensus 40 ~~~~~~l~~~i~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 40 TPDWDRLEKLIKEWQPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred chHHHHHHHHHHHhCCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 3468888888887889999999999999887542 22233332 2 3 3567899876
No 453
>CHL00197 carA carbamoyl-phosphate synthase arginine-specific small subunit; Provisional
Probab=31.95 E-value=2.2e+02 Score=27.42 Aligned_cols=67 Identities=19% Similarity=0.183 Sum_probs=41.5
Q ss_pred CCEEEEcCCCCh-hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCccccCCcHHHHHHHH
Q 019868 170 GDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGSIINDEDLLKIL 244 (334)
Q Consensus 170 gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~~~~~~~l~~l~ 244 (334)
+.+|++-+..+. +.....+..|+++..+|.+ .+.+.+++ .++.+|+|+ .|.+|.......+.++++.
T Consensus 192 ~~~I~viD~g~k~ni~~~L~~~G~~v~vvp~~----~~~~~i~~----~~~dgIilSgGPg~p~~~~~~i~~i~~~~ 260 (382)
T CHL00197 192 QLKIIVIDFGVKYNILRRLKSFGCSITVVPAT----SPYQDILS----YQPDGILLSNGPGDPSAIHYGIKTVKKLL 260 (382)
T ss_pred CCEEEEEECCcHHHHHHHHHHCCCeEEEEcCC----CCHHHHhc----cCCCEEEEcCCCCChhHHHHHHHHHHHHH
Confidence 457888777664 3445566689999998743 24555532 356788887 7888864333334455554
No 454
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=31.74 E-value=2.2e+02 Score=21.87 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=8.6
Q ss_pred EEeCCHHHHHHHHHHH
Q 019868 150 LVGCGADELIDLIMRC 165 (334)
Q Consensus 150 ~~t~G~~~~i~~~~~~ 165 (334)
+++.|++..+...+..
T Consensus 5 i~G~G~S~~~a~~~~~ 20 (128)
T cd05014 5 VTGVGKSGHIARKIAA 20 (128)
T ss_pred EEeCcHhHHHHHHHHH
Confidence 4466666655554443
No 455
>PRK06484 short chain dehydrogenase; Validated
Probab=31.67 E-value=3.5e+02 Score=26.71 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=48.4
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
.+++|.|+...-..+...|.+.|.+|++..-.-..........+.++..+..+- -|.+.+++.++. .+...+
T Consensus 271 ~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADI---TDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccC---CCHHHHHHHHHHHHHHcCCCCEE
Confidence 455555554444444556778888887765443334444444565655555321 244555544431 245666
Q ss_pred EEeCCCC-ccc--cCCcHHHHHHHHhC
Q 019868 223 FLTSPNN-PDG--SIINDEDLLKILEM 246 (334)
Q Consensus 223 ~l~~p~N-PtG--~~~~~~~l~~l~~~ 246 (334)
+.|.-.. +.+ .-.+.+++++..+.
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~ 374 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDV 374 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHh
Confidence 5442211 111 23456777776554
No 456
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=31.62 E-value=1.4e+02 Score=26.78 Aligned_cols=67 Identities=19% Similarity=0.041 Sum_probs=43.5
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CChhHHHHHHHCCCeEEEeeCCCCCCC-CHHHHHHhcccCCceEEEE
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEFDAAVNGAAVVKVPRKSDFSL-NVELIADAVEREKPKCIFL 224 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y~~~~~~~~~~G~~v~~v~~~~~~~~-d~~~l~~~l~~~~~~~i~l 224 (334)
..|++-.|++++-.++-. |.+.|..|+++.- .|.. ....+..++. +.+ |.+.+++.+.+.++++|+=
T Consensus 3 ~~IlvlgGT~egr~la~~-L~~~g~~v~~Svat~~g~----~~~~~~~v~~------G~l~~~~~l~~~l~~~~i~~VID 71 (248)
T PRK08057 3 PRILLLGGTSEARALARA-LAAAGVDIVLSLAGRTGG----PADLPGPVRV------GGFGGAEGLAAYLREEGIDLVID 71 (248)
T ss_pred ceEEEEechHHHHHHHHH-HHhCCCeEEEEEccCCCC----cccCCceEEE------CCCCCHHHHHHHHHHCCCCEEEE
Confidence 368899999999876654 5566776665543 3443 2223333332 356 8899999998777887664
No 457
>PRK08197 threonine synthase; Validated
Probab=31.34 E-value=4.8e+02 Score=25.04 Aligned_cols=103 Identities=19% Similarity=0.242 Sum_probs=53.3
Q ss_pred eeecCCCCCCCCCCHHHHHHHh--cC--cCCCCCCCcC--hHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHh-cCC
Q 019868 97 IVKIDANENPYGPPPEVREALG--QL--KFPYIYPDPE--SRRLRAALAKDSGLESDHILVGCGADELIDLIMRCV-LDP 169 (334)
Q Consensus 97 ~i~l~~~~~~~~~~~~v~~al~--~~--~~~~~Yp~~g--~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l-~~~ 169 (334)
.+.|+.|..|+-..+.+.+.+. ++ ..-..-|... .+...-.+.+......+.|+..+++..++.++..+- .+-
T Consensus 72 ~vslgeG~TPL~~~~~l~~~~G~~~l~~K~E~~nPtGSfKdRga~~~i~~a~~~g~~~vv~aSsGN~g~alA~~aa~~G~ 151 (394)
T PRK08197 72 IVSLGEGMTPLLPLPRLGKALGIGRLWVKDEGLNPTGSFKARGLAVGVSRAKELGVKHLAMPTNGNAGAAWAAYAARAGI 151 (394)
T ss_pred CCccCcCCCCceEhHHHHHHhCCCcEEEEeCCCCCCcCcHHhHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHHHcCC
Confidence 4777777777755555555442 22 1111113221 122222232222222356777666666666665532 222
Q ss_pred CCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 170 GDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 170 gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
.-.|+++.-.-..-....+.+|++++.++.
T Consensus 152 ~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~ 181 (394)
T PRK08197 152 RATIFMPADAPEITRLECALAGAELYLVDG 181 (394)
T ss_pred cEEEEEcCCCCHHHHHHHHHcCCEEEEECC
Confidence 245566554434455667779999999873
No 458
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=31.03 E-value=3.3e+02 Score=23.88 Aligned_cols=31 Identities=16% Similarity=0.089 Sum_probs=19.9
Q ss_pred CCEEEeCCH--HHHHHHHHHHhcCCCCEEEEcC
Q 019868 147 DHILVGCGA--DELIDLIMRCVLDPGDKIVDCP 177 (334)
Q Consensus 147 ~~I~~t~G~--~~~i~~~~~~l~~~gd~Vl~~~ 177 (334)
..+++|.|+ ...-..+.+.|.+.|.+|++..
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~ 40 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTY 40 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEec
Confidence 345665555 3455555666788998888764
No 459
>PRK01178 rps24e 30S ribosomal protein S24e; Reviewed
Probab=31.00 E-value=61 Score=24.81 Aligned_cols=26 Identities=19% Similarity=0.348 Sum_probs=21.1
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEe
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVG 152 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t 152 (334)
+.+.-.++|+.||+.++.+++.|++.
T Consensus 29 ~tpsr~eirekLa~~~~~~~~~vvv~ 54 (99)
T PRK01178 29 ATPSRKDVRKKLAAMLNADKELVVVR 54 (99)
T ss_pred CCCCHHHHHHHHHHHHCcCCCEEEEE
Confidence 34457899999999999888887773
No 460
>PRK06182 short chain dehydrogenase; Validated
Probab=30.96 E-value=3.7e+02 Score=23.69 Aligned_cols=74 Identities=14% Similarity=0.066 Sum_probs=38.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
.+++|.|+...-..+.+.|.+.|.+|++..-.-...... ...+.+++..+.. |.+.+++.++. .+...+
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDVT-----DEASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeCC-----CHHHHHHHHHHHHHhcCCCCEE
Confidence 466665554444555556778898887655332222222 2245555555432 44555444431 256666
Q ss_pred EEeCC
Q 019868 223 FLTSP 227 (334)
Q Consensus 223 ~l~~p 227 (334)
+.+..
T Consensus 79 i~~ag 83 (273)
T PRK06182 79 VNNAG 83 (273)
T ss_pred EECCC
Confidence 65533
No 461
>PRK07239 bifunctional uroporphyrinogen-III synthetase/response regulator domain protein; Validated
Probab=30.88 E-value=2.5e+02 Score=26.77 Aligned_cols=87 Identities=16% Similarity=0.121 Sum_probs=50.7
Q ss_pred cCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCC----C---hhHHHHHHHCCCeEEEeeCCCCCCC-C---HHHH
Q 019868 142 SGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPT----F---TMYEFDAAVNGAAVVKVPRKSDFSL-N---VELI 210 (334)
Q Consensus 142 ~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~----y---~~~~~~~~~~G~~v~~v~~~~~~~~-d---~~~l 210 (334)
+|+.++ ++...+..+++...+.....+|.+|+++.-. . .......+..|+++..++....-.. + .+.+
T Consensus 115 ~G~~~~-~~p~~~~~e~L~~~l~~~~~~g~~vli~~~~~~~~~~~~~~L~~~L~~~G~~V~~~~vY~~~~~~~~~~~~~~ 193 (381)
T PRK07239 115 AGLREE-WSPASESSAEVLEYLLEEGVAGKRIAVQLHGATDEWEPLPEFLEALRAAGAEVVPVPVYRWVPPPDPGPLDRL 193 (381)
T ss_pred cCCCCc-cCCCCCccHHHHHHHhcCCCCCCEEEEEcCCCccccCchHHHHHHHHHCCCEEEEeCcEEEcCCCChhHHHHH
Confidence 466443 3335555566655555444678898886432 1 2355666778999988873221111 1 2455
Q ss_pred HHhcccCCceEEEEeCCCC
Q 019868 211 ADAVEREKPKCIFLTSPNN 229 (334)
Q Consensus 211 ~~~l~~~~~~~i~l~~p~N 229 (334)
.+.+.+.+..+|++++++.
T Consensus 194 ~~~l~~~~~d~v~FtS~st 212 (381)
T PRK07239 194 VDAIASRGLDAVTFTSAPA 212 (381)
T ss_pred HHHHHcCCccEEEEcCHHH
Confidence 5666545678888887754
No 462
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=30.64 E-value=1.9e+02 Score=22.91 Aligned_cols=62 Identities=15% Similarity=0.070 Sum_probs=38.5
Q ss_pred ChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc--CCceEEEEeCCCCccccCCcHHHHHHHH
Q 019868 180 FTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--EKPKCIFLTSPNNPDGSIINDEDLLKIL 244 (334)
Q Consensus 180 y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~~i~l~~p~NPtG~~~~~~~l~~l~ 244 (334)
-......++..|.++..+..-.+ |.+.+.+.+.+ .+..+|+++.--.++-..+..+.++++.
T Consensus 21 ~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~i~~~~~~~DlvittGG~g~g~~D~t~~ai~~~g 84 (133)
T cd00758 21 GPALEALLEDLGCEVIYAGVVPD---DADSIRAALIEASREADLVLTTGGTGVGRRDVTPEALAELG 84 (133)
T ss_pred HHHHHHHHHHCCCEEEEeeecCC---CHHHHHHHHHHHHhcCCEEEECCCCCCCCCcchHHHHHHhc
Confidence 33455566778998877653222 45555555432 2467888876666666667777776654
No 463
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=30.14 E-value=3.1e+02 Score=24.87 Aligned_cols=13 Identities=31% Similarity=0.363 Sum_probs=7.0
Q ss_pred EEeCCHHHHHHHH
Q 019868 150 LVGCGADELIDLI 162 (334)
Q Consensus 150 ~~t~G~~~~i~~~ 162 (334)
+++.|++..+..-
T Consensus 145 i~G~G~S~~~A~~ 157 (292)
T PRK11337 145 LYGAGGSAAIARD 157 (292)
T ss_pred EEEecHHHHHHHH
Confidence 5566666554443
No 464
>PLN02565 cysteine synthase
Probab=30.06 E-value=2.6e+02 Score=26.14 Aligned_cols=51 Identities=12% Similarity=-0.072 Sum_probs=32.6
Q ss_pred EEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 149 ILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
|+-.+++..++.++..+- ++---.|++|.-.-..-....+.+|++++.++.
T Consensus 70 vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 666666667766665542 222244556655555666778889999998864
No 465
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed
Probab=30.06 E-value=2.9e+02 Score=26.38 Aligned_cols=56 Identities=25% Similarity=0.297 Sum_probs=37.1
Q ss_pred CCEEEEcCCCCh-hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe-CCCCcccc
Q 019868 170 GDKIVDCPPTFT-MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT-SPNNPDGS 233 (334)
Q Consensus 170 gd~Vl~~~p~y~-~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~-~p~NPtG~ 233 (334)
+.+|++.+.... ++.......|+.++.+|.+ .+.+++.. .+...|+|+ .|.+|...
T Consensus 177 ~~~I~viD~G~k~nivr~L~~~G~~v~vvp~~----~~~~~i~~----~~~DGIvLSgGPgdp~~~ 234 (360)
T PRK12564 177 KYKVVAIDFGVKRNILRELAERGCRVTVVPAT----TTAEEILA----LNPDGVFLSNGPGDPAAL 234 (360)
T ss_pred CCEEEEEeCCcHHHHHHHHHHCCCEEEEEeCC----CCHHHHHh----cCCCEEEEeCCCCChHHH
Confidence 457888886653 4566667789999998853 24555543 246778887 67777543
No 466
>PRK06841 short chain dehydrogenase; Provisional
Probab=30.05 E-value=3.7e+02 Score=23.30 Aligned_cols=79 Identities=14% Similarity=0.110 Sum_probs=39.8
Q ss_pred CCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 144 LESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 144 ~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
+....+++|.|+...-..+...|.+.|.+|++....-..........+.++..++.+- .|.+.+++.++. .+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~~~ 89 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDV---SDSQSVEAAVAAVISAFGR 89 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecC---CCHHHHHHHHHHHHHHhCC
Confidence 3334577766555555556666778888887665433222222222333443444321 245555544431 24
Q ss_pred ceEEEEe
Q 019868 219 PKCIFLT 225 (334)
Q Consensus 219 ~~~i~l~ 225 (334)
...++.+
T Consensus 90 ~d~vi~~ 96 (255)
T PRK06841 90 IDILVNS 96 (255)
T ss_pred CCEEEEC
Confidence 5666655
No 467
>KOG3424 consensus 40S ribosomal protein S24 [Translation, ribosomal structure and biogenesis]
Probab=29.91 E-value=69 Score=25.28 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=21.3
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEE
Q 019868 127 PDPESRRLRAALAKDSGLESDHILV 151 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~ 151 (334)
|...-.++||.||+.|..++|.|++
T Consensus 33 a~vsK~EirEKla~mYkt~~d~V~v 57 (132)
T KOG3424|consen 33 ANVSKTEIREKLAKMYKTTPDAVFV 57 (132)
T ss_pred CCCCHHHHHHHHHHHhcCCcceEEE
Confidence 4445689999999999999998887
No 468
>PRK05867 short chain dehydrogenase; Provisional
Probab=29.64 E-value=3.8e+02 Score=23.31 Aligned_cols=97 Identities=9% Similarity=0.073 Sum_probs=48.6
Q ss_pred CCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhccc-----C
Q 019868 146 SDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----E 217 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~ 217 (334)
...+++|.|+...-..+...|.+.|.+|++..-.-....... +..|.++..+..+- -|.+.+++.+++ .
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDV---SQHQQVTSMLDQVTAELG 85 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccC---CCHHHHHHHHHHHHHHhC
Confidence 345666666655555666667888988877654333332222 22355555554321 244555444321 2
Q ss_pred CceEEEEeC-CCCccc-cCCcHHHHHHHHh
Q 019868 218 KPKCIFLTS-PNNPDG-SIINDEDLLKILE 245 (334)
Q Consensus 218 ~~~~i~l~~-p~NPtG-~~~~~~~l~~l~~ 245 (334)
+...++.+. ...+.. ...+.+++++..+
T Consensus 86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~ 115 (253)
T PRK05867 86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQN 115 (253)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 566666552 222111 1235566655444
No 469
>PRK07063 short chain dehydrogenase; Provisional
Probab=29.35 E-value=3.9e+02 Score=23.33 Aligned_cols=96 Identities=22% Similarity=0.185 Sum_probs=47.1
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHH-----CCCeEEEeeCCCCCCCCHHHHHHhccc-----
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAV-----NGAAVVKVPRKSDFSLNVELIADAVER----- 216 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-----~G~~v~~v~~~~~~~~d~~~l~~~l~~----- 216 (334)
..+++|.|+...-..+.+.|++.|.+|++..-.-......... .+.++..+..+- -|.+.+++.++.
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADV---TDAASVAAAVAAAEEAF 84 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccC---CCHHHHHHHHHHHHHHh
Confidence 4567766665555556667788898887765433322222221 244555555321 234444444321
Q ss_pred CCceEEEEeCCCCccc--cCCcHHHHHHHHh
Q 019868 217 EKPKCIFLTSPNNPDG--SIINDEDLLKILE 245 (334)
Q Consensus 217 ~~~~~i~l~~p~NPtG--~~~~~~~l~~l~~ 245 (334)
.+...++-+.-....+ ...+.+++++..+
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~ 115 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFA 115 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 2455665442211112 2345566665443
No 470
>PRK08862 short chain dehydrogenase; Provisional
Probab=29.15 E-value=2.2e+02 Score=24.71 Aligned_cols=65 Identities=15% Similarity=0.112 Sum_probs=35.6
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHH---HHHCCCeEEEeeCCCCCCCCHHHHHHhc
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFD---AAVNGAAVVKVPRKSDFSLNVELIADAV 214 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~G~~v~~v~~~~~~~~d~~~l~~~l 214 (334)
..+++|.|+...-..+...|.+.|..|++..-.-...... ....|.++..+..+. .|.+.+++.+
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~ 73 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD---FSQESIRHLF 73 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccC---CCHHHHHHHH
Confidence 3566666665555556666788999888765443332222 223466666665432 2455555443
No 471
>PRK06484 short chain dehydrogenase; Validated
Probab=29.08 E-value=4.4e+02 Score=25.96 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=40.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
.+++|.|+...-..+.+.|.+.|..|++..-.-..........|.++..+..+- -|.+.+++.++. .+...+
T Consensus 7 ~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 7 VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDV---SDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecc---CCHHHHHHHHHHHHHHhCCCCEE
Confidence 456665555545555666778898887764333334444444566665555332 245555554432 245555
Q ss_pred EEe
Q 019868 223 FLT 225 (334)
Q Consensus 223 ~l~ 225 (334)
+.+
T Consensus 84 i~n 86 (520)
T PRK06484 84 VNN 86 (520)
T ss_pred EEC
Confidence 544
No 472
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=28.95 E-value=1.7e+02 Score=26.35 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=46.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcC-CCChhHHHHHHH---CCCeEEEeeCCCCCCC-CHHHHHHhcccCCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCP-PTFTMYEFDAAV---NGAAVVKVPRKSDFSL-NVELIADAVEREKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~~~---~G~~v~~v~~~~~~~~-d~~~l~~~l~~~~~~~i 222 (334)
+|++-.|++++-.++-. |.+.|. |+++- ..|. ..... .+..++. +.+ |.+.+++.+++.++++|
T Consensus 2 ~ILvlgGTtE~r~la~~-L~~~g~-v~~sv~t~~g---~~~~~~~~~~~~v~~------G~lg~~~~l~~~l~~~~i~~v 70 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAER-LAEAGY-VIVSVATSYG---GELLKPELPGLEVRV------GRLGDEEGLAEFLRENGIDAV 70 (249)
T ss_pred EEEEEechHHHHHHHHH-HHhcCC-EEEEEEhhhh---HhhhccccCCceEEE------CCCCCHHHHHHHHHhCCCcEE
Confidence 58889999999876665 677777 55443 2222 21111 1222221 356 88999999987777776
Q ss_pred EEeCCCCccccCCcHHH
Q 019868 223 FLTSPNNPDGSIINDED 239 (334)
Q Consensus 223 ~l~~p~NPtG~~~~~~~ 239 (334)
+= ..+|--..++...
T Consensus 71 ID--ATHPfA~~is~na 85 (249)
T PF02571_consen 71 ID--ATHPFAAEISQNA 85 (249)
T ss_pred EE--CCCchHHHHHHHH
Confidence 64 3334444444433
No 473
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=27.94 E-value=2.2e+02 Score=26.65 Aligned_cols=71 Identities=17% Similarity=0.128 Sum_probs=45.2
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIF 223 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~ 223 (334)
.|++|.|+-=.-...+..|++.|-.|++-+.....+.......-.+.+.-+ -.|-+.|.+.+.+.++.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gD-----i~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGD-----LLDRALLTAVFEENKIDAVV 72 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEec-----cccHHHHHHHHHhcCCCEEE
Confidence 478888887777777888888997776666555555544433222333322 34667777777766666665
No 474
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=27.17 E-value=2e+02 Score=26.00 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=41.1
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEe
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLT 225 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~ 225 (334)
.|++..|++++- .+...|...|..|++..- .|. -. .....|...+.. ..+|.+.+.+.+.+.++++|+-.
T Consensus 2 ~ILvlGGT~egr-~la~~L~~~g~~v~~s~~t~~~-~~-~~~~~g~~~v~~-----g~l~~~~l~~~l~~~~i~~VIDA 72 (256)
T TIGR00715 2 TVLLMGGTVDSR-AIAKGLIAQGIEILVTVTTSEG-KH-LYPIHQALTVHT-----GALDPQELREFLKRHSIDILVDA 72 (256)
T ss_pred eEEEEechHHHH-HHHHHHHhCCCeEEEEEccCCc-cc-cccccCCceEEE-----CCCCHHHHHHHHHhcCCCEEEEc
Confidence 588888988854 445457777876665543 332 11 112233333332 24677888888876677766643
No 475
>PLN00011 cysteine synthase
Probab=27.14 E-value=2.9e+02 Score=25.74 Aligned_cols=53 Identities=11% Similarity=-0.070 Sum_probs=35.4
Q ss_pred CCEEEeCCHHHHHHHHHHHhc-CCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 147 DHILVGCGADELIDLIMRCVL-DPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
+.|+..+++..++.+...+-. +=.-.|+++...-..-....+.+|++++.++.
T Consensus 70 ~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 70 STLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred cEEEEeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 357777777777776665432 22245666665555666778889999998874
No 476
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=27.12 E-value=1.1e+02 Score=22.71 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=37.8
Q ss_pred CCcChHHHHHHHHHhcCCCCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCC-CChhHHHHHHHCCCeEEEe
Q 019868 127 PDPESRRLRAALAKDSGLESDHILVGCGADELIDLIMRCVLDPGDKIVDCPP-TFTMYEFDAAVNGAAVVKV 197 (334)
Q Consensus 127 p~~g~~~lr~~lA~~~~~~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p-~y~~~~~~~~~~G~~v~~v 197 (334)
|..|..+|++++++.+|.+.+. .+ . ..+..+=++||.|++..- .-..-...++..|-+.+.+
T Consensus 19 ~s~~~~~L~~~I~~Rl~~d~~~----~~---~--~~L~YlDDEgD~VllT~D~DL~e~v~iar~~g~~~v~L 81 (86)
T cd06409 19 PSESLEELRTLISQRLGDDDFE----TH---L--YALSYVDDEGDIVLITSDSDLVAAVLVARSAGLKKLDL 81 (86)
T ss_pred CCCCHHHHHHHHHHHhCCcccc----CC---c--ccEEEEcCCCCEEEEeccchHHHHHHHHHHcCCCEEEE
Confidence 4668999999999999876542 11 1 112223467888876643 3334455566667666544
No 477
>PF07179 SseB: SseB protein N-terminal domain; InterPro: IPR009839 This family consists of several SseB proteins, which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli [] and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon [].
Probab=27.07 E-value=1.5e+02 Score=22.71 Aligned_cols=65 Identities=17% Similarity=0.279 Sum_probs=37.9
Q ss_pred CCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHH
Q 019868 169 PGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKI 243 (334)
Q Consensus 169 ~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l 243 (334)
.|...+ |.|.....+.+..+ .-.. --.++.+++.+.+...+...|+ .||..+.|..++.+.++.|
T Consensus 60 dg~~~l---pvFTs~e~l~~~~~-~~~~-----~~~~~~~~l~~~~~~~~~~giv-iNP~~~~~~~l~~~~i~~l 124 (124)
T PF07179_consen 60 DGERYL---PVFTSWEELEKWYP-DERP-----IIVVPFEDLLEMLLNNEGDGIV-INPGTPSGFVLPREEIEAL 124 (124)
T ss_pred CCCEEE---EEECCHHHHHhhhc-ccCc-----eecccHHHHHHHhhcCCCcEEE-EECCCCceEEECHHHHhhC
Confidence 444443 45666665555443 1111 0145677777777423445555 4688888899999998764
No 478
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=26.85 E-value=3.3e+02 Score=23.51 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=40.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEc-CCCChhHH---HHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDC-PPTFTMYE---FDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~-~p~y~~~~---~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
.+++|.|+...-..+.+.|++.|..|++. ...=.... ...+..+.++..+..+- -|.+.+.+.+++ .+
T Consensus 6 ~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 6 VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANV---GDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCC---CCHHHHHHHHHHHHHHcCC
Confidence 56676666555556666778888777652 21111111 12233466666665432 255555554432 24
Q ss_pred ceEEEEeC
Q 019868 219 PKCIFLTS 226 (334)
Q Consensus 219 ~~~i~l~~ 226 (334)
++.++.+.
T Consensus 83 id~vi~~a 90 (250)
T PRK08063 83 LDVFVNNA 90 (250)
T ss_pred CCEEEECC
Confidence 67777654
No 479
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=26.79 E-value=4.2e+02 Score=22.97 Aligned_cols=78 Identities=6% Similarity=0.027 Sum_probs=42.4
Q ss_pred CCCCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----
Q 019868 145 ESDHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (334)
Q Consensus 145 ~~~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----- 216 (334)
....+++|.|+...-..+.+.|++.|-+|++..-.-..... ..+..|.++..+..+- -|.+.+++.++.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDV---TDHDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccC---CCHHHHHHHHHHHHHhc
Confidence 33467777766666666667788889888776533222222 2223455666655332 245555554431
Q ss_pred CCceEEEEe
Q 019868 217 EKPKCIFLT 225 (334)
Q Consensus 217 ~~~~~i~l~ 225 (334)
.+...++.+
T Consensus 86 ~~~d~li~~ 94 (255)
T PRK07523 86 GPIDILVNN 94 (255)
T ss_pred CCCCEEEEC
Confidence 235666655
No 480
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=26.69 E-value=3e+02 Score=24.22 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=51.0
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCC--eEEEeeCCCCCCCCHHH-HHHhcccC-CceEEEE
Q 019868 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGA--AVVKVPRKSDFSLNVEL-IADAVERE-KPKCIFL 224 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~--~v~~v~~~~~~~~d~~~-l~~~l~~~-~~~~i~l 224 (334)
.++|.|+...-..+...+.+.|-+|++.+-.-..-...+...|. .-..+..+-...-|.+. +++..+.- .+..++=
T Consensus 17 ~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVn 96 (256)
T KOG1200|consen 17 AAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVN 96 (256)
T ss_pred eEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEE
Confidence 34444444334444555668999999988777666666666554 22222211111123333 33333322 3444443
Q ss_pred eCCCCccccCC--cHHHHHHHHhC
Q 019868 225 TSPNNPDGSII--NDEDLLKILEM 246 (334)
Q Consensus 225 ~~p~NPtG~~~--~~~~l~~l~~~ 246 (334)
|.--+-.+..+ ..++|.+....
T Consensus 97 cAGItrD~~Llrmkq~qwd~vi~v 120 (256)
T KOG1200|consen 97 CAGITRDGLLLRMKQEQWDSVIAV 120 (256)
T ss_pred cCccccccceeeccHHHHHHHHHh
Confidence 34445555544 67888887765
No 481
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=26.64 E-value=4.1e+02 Score=24.17 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=25.6
Q ss_pred ceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEccC
Q 019868 219 PKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDEA 255 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDea 255 (334)
..+++-++|. .||..++.+.+++|++. ++.-|=|..
T Consensus 129 lpi~iYn~P~-~tg~~l~~~~~~~L~~~pnivgiK~s~ 165 (288)
T cd00954 129 LPMIIYHIPA-LTGVNLTLEQFLELFEIPNVIGVKFTA 165 (288)
T ss_pred CCEEEEeCcc-ccCCCCCHHHHHHHhcCCCEEEEEeCC
Confidence 3455545554 47999999999999987 666666654
No 482
>PRK10892 D-arabinose 5-phosphate isomerase; Provisional
Probab=26.64 E-value=3.9e+02 Score=24.65 Aligned_cols=16 Identities=19% Similarity=0.200 Sum_probs=8.0
Q ss_pred CCceEEEEe-CCCCccc
Q 019868 217 EKPKCIFLT-SPNNPDG 232 (334)
Q Consensus 217 ~~~~~i~l~-~p~NPtG 232 (334)
.+.+.|.++ +++||-+
T Consensus 120 ~g~~vi~iT~~~~s~la 136 (326)
T PRK10892 120 LHVPLICITGRPESSMA 136 (326)
T ss_pred CCCcEEEEECCCCCccc
Confidence 445555555 4555533
No 483
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=26.61 E-value=2.8e+02 Score=20.89 Aligned_cols=90 Identities=19% Similarity=0.227 Sum_probs=51.0
Q ss_pred EEeCCHHHHHHHHHHHhcCCC-CEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868 150 LVGCGADELIDLIMRCVLDPG-DKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 150 ~~t~G~~~~i~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
+++.|...........-..++ ..+.+.++.-......++..|.. .+. |++++.+ .+++.+++++.|+
T Consensus 5 iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~--~~~-------~~~~ll~---~~~~D~V~I~tp~ 72 (120)
T PF01408_consen 5 IIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP--VYT-------DLEELLA---DEDVDAVIIATPP 72 (120)
T ss_dssp EESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE--EES-------SHHHHHH---HTTESEEEEESSG
T ss_pred EECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc--chh-------HHHHHHH---hhcCCEEEEecCC
Confidence 456666533332111112234 33446677665566667778887 222 3444443 4578899999887
Q ss_pred CccccCCcHHHHHHHHhCCCeEEEccCC
Q 019868 229 NPDGSIINDEDLLKILEMPILVVLDEAY 256 (334)
Q Consensus 229 NPtG~~~~~~~l~~l~~~~~~lIvDeay 256 (334)
. .-.+...+.++.|..++++=..
T Consensus 73 ~-----~h~~~~~~~l~~g~~v~~EKP~ 95 (120)
T PF01408_consen 73 S-----SHAEIAKKALEAGKHVLVEKPL 95 (120)
T ss_dssp G-----GHHHHHHHHHHTTSEEEEESSS
T ss_pred c-----chHHHHHHHHHcCCEEEEEcCC
Confidence 3 2345556666668888776543
No 484
>PRK06483 dihydromonapterin reductase; Provisional
Probab=26.54 E-value=4.1e+02 Score=22.73 Aligned_cols=93 Identities=11% Similarity=0.065 Sum_probs=45.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceEE
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKCI 222 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~i 222 (334)
.+++|.|+...-..+...|...|.+|++..-.-.......+..|...+..+.. |.+.+++.++. .+...+
T Consensus 4 ~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 4 PILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFS-----TNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCC-----CHHHHHHHHHHHHhhCCCccEE
Confidence 46666666555555666677888888766433222223333356555444322 33444433321 235555
Q ss_pred EEeCCCCccc--cCCcHHHHHHHHh
Q 019868 223 FLTSPNNPDG--SIINDEDLLKILE 245 (334)
Q Consensus 223 ~l~~p~NPtG--~~~~~~~l~~l~~ 245 (334)
+-+.-....+ ...+.+++++..+
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~ 103 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQ 103 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHH
Confidence 5442211111 1234666666554
No 485
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=26.48 E-value=3.1e+02 Score=25.92 Aligned_cols=101 Identities=17% Similarity=0.269 Sum_probs=64.4
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcC-CCChh-----HHHHHHHCCCeEEEeeCCCCCCCC-----HHHHHHhcccCCce
Q 019868 152 GCGADELIDLIMRCVLDPGDKIVDCP-PTFTM-----YEFDAAVNGAAVVKVPRKSDFSLN-----VELIADAVEREKPK 220 (334)
Q Consensus 152 t~G~~~~i~~~~~~l~~~gd~Vl~~~-p~y~~-----~~~~~~~~G~~v~~v~~~~~~~~d-----~~~l~~~l~~~~~~ 220 (334)
+.|=|..|..+...+.+.|-+|++.. -+|.. ....++..|..++.-+ .+-| .+.++.+.. .+..
T Consensus 149 G~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~----~G~DpAaVafDAi~~Aka-r~~D 223 (340)
T COG0552 149 GVGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK----EGADPAAVAFDAIQAAKA-RGID 223 (340)
T ss_pred CCchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC----CCCCcHHHHHHHHHHHHH-cCCC
Confidence 46778899999998888998776554 46631 2334556888888753 2334 355666654 5778
Q ss_pred EEEEeCC---CCccccCCcHHHHHHHHhC-------CCeEEEccCCc
Q 019868 221 CIFLTSP---NNPDGSIINDEDLLKILEM-------PILVVLDEAYT 257 (334)
Q Consensus 221 ~i~l~~p---~NPtG~~~~~~~l~~l~~~-------~~~lIvDeay~ 257 (334)
+|++... ||-+...-..+.+.++++. .++++.|..-+
T Consensus 224 vvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 224 VVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred EEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 8888644 6766665455555555544 26677787643
No 486
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=26.47 E-value=4.7e+02 Score=23.40 Aligned_cols=17 Identities=29% Similarity=0.526 Sum_probs=8.3
Q ss_pred CEEE-eCCHHHHHHHHHH
Q 019868 148 HILV-GCGADELIDLIMR 164 (334)
Q Consensus 148 ~I~~-t~G~~~~i~~~~~ 164 (334)
+|++ +.|.+..+..-+.
T Consensus 130 ~I~i~G~G~s~~~A~~~~ 147 (278)
T PRK11557 130 RIILTGIGASGLVAQNFA 147 (278)
T ss_pred eEEEEecChhHHHHHHHH
Confidence 4433 5565555544444
No 487
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=26.29 E-value=3.2e+02 Score=24.84 Aligned_cols=53 Identities=19% Similarity=0.013 Sum_probs=33.2
Q ss_pred CCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 147 DHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
..|+..+++..+...+..+- ++-.-.|+++.-.-..-....+.+|++++.++.
T Consensus 54 ~~vv~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~ 107 (291)
T cd01561 54 TTIIEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPE 107 (291)
T ss_pred CEEEEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 34666677766666655532 222245566654445566777789999999874
No 488
>PRK05717 oxidoreductase; Validated
Probab=26.25 E-value=4.4e+02 Score=22.93 Aligned_cols=76 Identities=13% Similarity=-0.012 Sum_probs=39.7
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCceE
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKPKC 221 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~~ 221 (334)
..+++|.|+...-..+.+.|.+.|.+|++.+..-.......+..+.++..+..+- -|.+.+.+++++ .+...
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDV---ADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccC---CCHHHHHHHHHHHHHHhCCCCE
Confidence 3466666665555566667778888888765443323333333444455544321 244444333221 24566
Q ss_pred EEEe
Q 019868 222 IFLT 225 (334)
Q Consensus 222 i~l~ 225 (334)
++-+
T Consensus 88 li~~ 91 (255)
T PRK05717 88 LVCN 91 (255)
T ss_pred EEEC
Confidence 6655
No 489
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=26.15 E-value=3.9e+02 Score=24.44 Aligned_cols=36 Identities=17% Similarity=0.083 Sum_probs=25.4
Q ss_pred CceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEcc
Q 019868 218 KPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLDE 254 (334)
Q Consensus 218 ~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvDe 254 (334)
+..+++-++|.. ||..++.+.+.+|++. ++.-|=|.
T Consensus 128 ~lpv~lYn~P~~-tg~~l~~~~i~~L~~~pnv~giK~s 164 (290)
T TIGR00683 128 GLNMIVYSIPFL-TGVNMGIEQFGELYKNPKVLGVKFT 164 (290)
T ss_pred CCCEEEEeCccc-cccCcCHHHHHHHhcCCCEEEEEeC
Confidence 345666556543 8999999999999976 55555554
No 490
>PRK05876 short chain dehydrogenase; Provisional
Probab=25.90 E-value=4.8e+02 Score=23.27 Aligned_cols=96 Identities=11% Similarity=0.049 Sum_probs=48.0
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHH---HHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDA---AVNGAAVVKVPRKSDFSLNVELIADAVER-----EK 218 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~ 218 (334)
..+++|.|+...-..+...|...|.+|++..-.-....... ...|.++..+..+- -|.+.+++.++. .+
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv---~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDV---RHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCC---CCHHHHHHHHHHHHHHcCC
Confidence 35677666655555666667788888876653333222222 22465666555431 245555554431 24
Q ss_pred ceEEEEeCCCCcccc--CCcHHHHHHHHh
Q 019868 219 PKCIFLTSPNNPDGS--IINDEDLLKILE 245 (334)
Q Consensus 219 ~~~i~l~~p~NPtG~--~~~~~~l~~l~~ 245 (334)
..+++-+..-...|. ..+.++++++.+
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~ 112 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVID 112 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHh
Confidence 555554321111122 245666655443
No 491
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=25.84 E-value=3.3e+02 Score=26.69 Aligned_cols=99 Identities=10% Similarity=0.090 Sum_probs=52.0
Q ss_pred eCCHHHHHHHHHHHhcCCCCEEEEcC-CCCh--hH---HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc----CCceE
Q 019868 152 GCGADELIDLIMRCVLDPGDKIVDCP-PTFT--MY---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----EKPKC 221 (334)
Q Consensus 152 t~G~~~~i~~~~~~l~~~gd~Vl~~~-p~y~--~~---~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~~ 221 (334)
+.|=|..+..+...+...|.+|.+.+ -+|. .. ...+...|+.++... +.+.+.+.+.. .+...
T Consensus 251 GvGKTTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~~-------d~~~L~~aL~~lk~~~~~Dv 323 (436)
T PRK11889 251 GVGKTTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAVR-------DEAAMTRALTYFKEEARVDY 323 (436)
T ss_pred CCcHHHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEecC-------CHHHHHHHHHHHHhccCCCE
Confidence 45666677777666667776554333 2442 22 233344666655432 44555555531 24578
Q ss_pred EEEeCCCCccccCCcHHHHHHHHhC----CCeEEEccCCc
Q 019868 222 IFLTSPNNPDGSIINDEDLLKILEM----PILVVLDEAYT 257 (334)
Q Consensus 222 i~l~~p~NPtG~~~~~~~l~~l~~~----~~~lIvDeay~ 257 (334)
|++..+...--..-..+++.++.+. .+++++|....
T Consensus 324 VLIDTaGRs~kd~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 324 ILIDTAGKNYRASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EEEeCccccCcCHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 8887663221122234555555543 46777887543
No 492
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=25.69 E-value=1.8e+02 Score=23.27 Aligned_cols=54 Identities=20% Similarity=0.158 Sum_probs=38.1
Q ss_pred CCCHHHHHHhcccCCceEEEEeCCCCccccCCcHH-HHHHHHh----C-C-CeEEEccCCc
Q 019868 204 SLNVELIADAVEREKPKCIFLTSPNNPDGSIINDE-DLLKILE----M-P-ILVVLDEAYT 257 (334)
Q Consensus 204 ~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~-~l~~l~~----~-~-~~lIvDeay~ 257 (334)
..+.+.+.+.+++.++..|++--|-|+.|..-+.. ..+++++ . + -+..+||-|.
T Consensus 34 ~~~~~~l~~~i~~~~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 34 EPDWSRIEELLKEWTPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred cHHHHHHHHHHHHcCCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 45678888888878899999999999999886532 2223332 2 3 3567898775
No 493
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=25.42 E-value=3.1e+02 Score=24.07 Aligned_cols=52 Identities=25% Similarity=0.156 Sum_probs=30.9
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCC--CEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 147 DHILVGCGADELIDLIMRCVLDPG--DKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
..|+..+++..+..++..+- ..| -.|+++.-.-.......+..|++++.++.
T Consensus 51 ~~vv~~ssGN~g~alA~~a~-~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 51 GVIIESTGGNTGIALAAAAA-RLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred CEEEEeCCcHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 34555556566665555432 234 34455544444555667779999999874
No 494
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=25.29 E-value=4.3e+02 Score=22.59 Aligned_cols=80 Identities=11% Similarity=0.067 Sum_probs=40.3
Q ss_pred CEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHH---HHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----CCc
Q 019868 148 HILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEF---DAAVNGAAVVKVPRKSDFSLNVELIADAVER-----EKP 219 (334)
Q Consensus 148 ~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~ 219 (334)
.+++|.|+...-..+...|+..|..|++..-.-..... .....+.++..+..+- -|.+.+++.++. .+.
T Consensus 9 ~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADV---SDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCC---CCHHHHHHHHHHHHHHcCCc
Confidence 46666555444445555677788777665432221111 1222455565555332 245555554431 256
Q ss_pred eEEEEeCCCCc
Q 019868 220 KCIFLTSPNNP 230 (334)
Q Consensus 220 ~~i~l~~p~NP 230 (334)
++|+.+...++
T Consensus 86 d~vi~~ag~~~ 96 (239)
T PRK07666 86 DILINNAGISK 96 (239)
T ss_pred cEEEEcCcccc
Confidence 77776644333
No 495
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=25.06 E-value=5.5e+02 Score=23.66 Aligned_cols=54 Identities=11% Similarity=-0.061 Sum_probs=33.2
Q ss_pred CCCEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeC
Q 019868 146 SDHILVGCGADELIDLIMRCV-LDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPR 199 (334)
Q Consensus 146 ~~~I~~t~G~~~~i~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~ 199 (334)
.+.|+..+++..++.++..+- ++-.-.|+++...=..-....+.+|++++.++.
T Consensus 70 ~~~vv~~SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~ 124 (324)
T cd01563 70 VKAVACASTGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEG 124 (324)
T ss_pred CCEEEEeCCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECC
Confidence 346777777777777665432 222244555554423445567779999999863
No 496
>cd08073 MPN_NLPC_P60 Mpr1p, Pad1p N-terminal (MPN) domains with catalytic isopeptidase activity (metal-binding) found in proteins also containing NlpC/P60 domains. This family contains bacterial MPN (also known as Mov34, PAD-1, JAMM, JAB, MPN+)-like domains at the N-terminus of NlpC/P60 phage tail protein domains. These domains contain the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity for the release of ubiquitin from ubiquitinated proteins (thus having deubiquitinating (DUB) activity) that are tagged for degradation. The JAMM proteins likely hydrolyze ubiquitin conjugates in a manner similar to thermolysin, in which the zinc-polarized aqua ligand serves as the nucleophile, compared with the classical DUBs that do so with a cysteine residue in the active site.
Probab=25.01 E-value=2.2e+02 Score=21.88 Aligned_cols=51 Identities=12% Similarity=0.166 Sum_probs=31.9
Q ss_pred CCCCCCHHHHHHhcccCCceEEEEeCCCCccccCCcHHHHHHHHhC-CCeEEEc
Q 019868 201 SDFSLNVELIADAVEREKPKCIFLTSPNNPDGSIINDEDLLKILEM-PILVVLD 253 (334)
Q Consensus 201 ~~~~~d~~~l~~~l~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~-~~~lIvD 253 (334)
..|.+|++++.++.+..+.-.++-++|+. ....+..+++..... -.++|+-
T Consensus 43 ~~F~idp~e~~~a~~~~~ivgi~HSHP~~--~a~PS~~D~~~~~~~~~~~iIvs 94 (108)
T cd08073 43 EHFEISPEDYAAAEDEGEIVAVVHSHPDG--SPAPSEADRAQQEATGLPWIIVS 94 (108)
T ss_pred ceEEeCHHHHHHHhcCCCEEEEEEcCCCC--CCCCCHHHHHHhhcCCCcEEEEE
Confidence 45889999998887644556666666653 345567776544333 3555553
No 497
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=24.90 E-value=2.9e+02 Score=22.46 Aligned_cols=62 Identities=16% Similarity=0.076 Sum_probs=42.9
Q ss_pred hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc--C--CceEEEEeCCCCccccCCcHHHHHHHHhC
Q 019868 182 MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER--E--KPKCIFLTSPNNPDGSIINDEDLLKILEM 246 (334)
Q Consensus 182 ~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~--~--~~~~i~l~~p~NPtG~~~~~~~l~~l~~~ 246 (334)
.....++..|+++..+..-.| |.+.+++.+++ . +..+|+++.-..++-..+..+.++++.+.
T Consensus 24 ~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~~~~ 89 (152)
T cd00886 24 ALVELLEEAGHEVVAYEIVPD---DKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPLLDK 89 (152)
T ss_pred HHHHHHHHcCCeeeeEEEcCC---CHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHHhCC
Confidence 445566779999887763223 56666665542 2 57888888777888888888888887654
No 498
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=24.86 E-value=3.6e+02 Score=21.95 Aligned_cols=70 Identities=11% Similarity=0.119 Sum_probs=40.6
Q ss_pred EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhcccCCceEEEEeCCC
Q 019868 149 ILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTMYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVEREKPKCIFLTSPN 228 (334)
Q Consensus 149 I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~~~i~l~~p~ 228 (334)
|+++.++...-..+++.|++.|-+|....-.-..... ..+++++..+. .|++.+.+++. +...|+.+.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~-----~d~~~~~~al~--~~d~vi~~~~~ 70 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDL-----FDPDSVKAALK--GADAVIHAAGP 70 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCT-----TCHHHHHHHHT--TSSEEEECCHS
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeee-----hhhhhhhhhhh--hcchhhhhhhh
Confidence 4455444445556666677777666544333222222 45666655432 47899999986 56777766543
No 499
>PRK08278 short chain dehydrogenase; Provisional
Probab=24.76 E-value=4.9e+02 Score=23.04 Aligned_cols=76 Identities=12% Similarity=0.055 Sum_probs=41.2
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCChh-------H---HHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTFTM-------Y---EFDAAVNGAAVVKVPRKSDFSLNVELIADAVER 216 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y~~-------~---~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~ 216 (334)
..+++|.|+...-..+.+.|.+.|.+|++....... . .......|.++..+..+ -.|.+.+++.++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D---~~~~~~i~~~~~~ 83 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGD---VRDEDQVAAAVAK 83 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEec---CCCHHHHHHHHHH
Confidence 356676666655556666777888888765543321 1 11122346666665533 1245555554431
Q ss_pred -----CCceEEEEe
Q 019868 217 -----EKPKCIFLT 225 (334)
Q Consensus 217 -----~~~~~i~l~ 225 (334)
.+...|+.+
T Consensus 84 ~~~~~g~id~li~~ 97 (273)
T PRK08278 84 AVERFGGIDICVNN 97 (273)
T ss_pred HHHHhCCCCEEEEC
Confidence 256777755
No 500
>PRK06128 oxidoreductase; Provisional
Probab=24.35 E-value=5.1e+02 Score=23.38 Aligned_cols=96 Identities=11% Similarity=0.013 Sum_probs=48.8
Q ss_pred CCEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCC--h---hHHHHHHHCCCeEEEeeCCCCCCCCHHHHHHhccc-----
Q 019868 147 DHILVGCGADELIDLIMRCVLDPGDKIVDCPPTF--T---MYEFDAAVNGAAVVKVPRKSDFSLNVELIADAVER----- 216 (334)
Q Consensus 147 ~~I~~t~G~~~~i~~~~~~l~~~gd~Vl~~~p~y--~---~~~~~~~~~G~~v~~v~~~~~~~~d~~~l~~~l~~----- 216 (334)
..+++|.|+...-..+...|++.|.+|++....- . ......+..|.++..+..+- -|.+.+++++++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDL---KDEAFCRQLVERAVKEL 132 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCC---CCHHHHHHHHHHHHHHh
Confidence 4677776666555666667788898887643211 1 11122233566666665332 245555544431
Q ss_pred CCceEEEEeCCCC-ccc--cCCcHHHHHHHHh
Q 019868 217 EKPKCIFLTSPNN-PDG--SIINDEDLLKILE 245 (334)
Q Consensus 217 ~~~~~i~l~~p~N-PtG--~~~~~~~l~~l~~ 245 (334)
.+...++.+.... +.+ ...+.+++++..+
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~ 164 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFK 164 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHH
Confidence 2456666543211 111 2335666666544
Done!