Your job contains 1 sequence.
>019871
MSLAPSSYASLYSPPPLPRTNQNPFLFSQNSHVWFKKNCFLSASGCSCNTLLVKPSVFVA
KASETEAQASPEAESGSEEQEEKYEEYEVEIEQPYGLKFAKGRDGGTYIDAIAPGGSADK
TGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGKMEQTGELSE
KEIIRAERNSGVISNRVREIQMQNYMKKKEQKERREQDLREGLQLYRTGKYEVAREKFES
VLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLAGYEDFKRVRTDPDLENLRA
SEEFDVLLKRFDESFINENAINAIKSLFGLLDKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 019871
(334 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2193844 - symbol:ZKT "protein containing PDZ d... 1002 4.9e-101 1
TAIR|locus:2024720 - symbol:LPA1 "LOW PSII ACCUMULATION1"... 137 1.6e-06 1
TAIR|locus:2167150 - symbol:ENH1 "enhancer of sos3-1" spe... 113 0.00033 1
>TAIR|locus:2193844 [details] [associations]
symbol:ZKT "protein containing PDZ domain, a K-box
domain, and a TPR region" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] [GO:0015979 "photosynthesis" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
InterPro:IPR001478 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50106 PROSITE:PS50293
EMBL:CP002684 GO:GO:0009570 GO:GO:0009611 GO:GO:0009941
Gene3D:1.25.40.10 SUPFAM:SSF50156 GO:GO:0009535 EMBL:AY039926
EMBL:AY079359 EMBL:AY986818 EMBL:AB190499 IPI:IPI00548632
RefSeq:NP_564691.1 UniGene:At.19231 ProteinModelPortal:Q94BS2
SMR:Q94BS2 STRING:Q94BS2 PRIDE:Q94BS2 ProMEX:Q94BS2
EnsemblPlants:AT1G55480.1 GeneID:841995 KEGG:ath:AT1G55480
TAIR:At1g55480 InParanoid:Q94BS2 OMA:DFKRIRT PhylomeDB:Q94BS2
ProtClustDB:CLSN2688838 ArrayExpress:Q94BS2 Genevestigator:Q94BS2
Uniprot:Q94BS2
Length = 335
Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
Identities = 207/317 (65%), Positives = 238/317 (75%)
Query: 19 RTNQNPFLFSQNSHVWFKKNCFLSASGCS-CNTLLVKPSVFVAKASETXXXXXXXXXXXX 77
+T QNP L +Q+S + K+ FLS++ S CNT + K KASET
Sbjct: 22 QTKQNPSLITQSSFI-SAKSLFLSSNSASLCNTHVAKRRNLALKASETESSAKAEAGGDG 80
Query: 78 XXXXXXXXXXXXXXXXXXGLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVF 137
GLKF KGRDGGTYIDAI PGGSADKTG F VGD+V+ATSAVF
Sbjct: 81 EEEEKYETYEIEVEQPY-GLKFRKGRDGGTYIDAILPGGSADKTGKFTVGDRVIATSAVF 139
Query: 138 GTEIWPAAEYGRTMYTIRQRVGPLLMKMQKRYGKMEQTGELSEKEIIRAERNSGVISNRV 197
GTEIWPAAEYGRTMYTIRQR+GPLLM+M+KR GK E TGEL+EKEIIRAERN+G IS+R+
Sbjct: 140 GTEIWPAAEYGRTMYTIRQRIGPLLMQMEKRNGKAEDTGELTEKEIIRAERNAGYISSRL 199
Query: 198 REIQMQNYMXXXXXXXXXXXDLREGLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYN 257
REIQMQNY+ DLREGLQ + GKYE A E+FESVLGSKPTPEE+SVASYN
Sbjct: 200 REIQMQNYLKKKEQKAQREKDLREGLQFSKNGKYEEALERFESVLGSKPTPEEASVASYN 259
Query: 258 VACCYSKLNQVKAGLSALEDALLAGYEDFKRVRTDPDLENLRASEEFDVLLKRFDESFIN 317
VACCYSKLNQV+AGLSALE+AL +GYEDFKR+R+DPDLE LR S++FD LLK+FDESFIN
Sbjct: 260 VACCYSKLNQVQAGLSALEEALKSGYEDFKRIRSDPDLETLRKSKDFDPLLKQFDESFIN 319
Query: 318 ENAINAIKSLFGLLDKK 334
E+AINAIKSLFG +KK
Sbjct: 320 ESAINAIKSLFGF-NKK 335
>TAIR|locus:2024720 [details] [associations]
symbol:LPA1 "LOW PSII ACCUMULATION1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0010270 "photosystem II oxygen evolving complex assembly"
evidence=IMP] [GO:0010027 "thylakoid membrane organization"
evidence=RCA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009507 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
EMBL:AC009525 GO:GO:0010270 InterPro:IPR021883 Pfam:PF11998
IPI:IPI00538024 PIR:E86159 RefSeq:NP_171790.1 UniGene:At.42573
ProteinModelPortal:Q9SRY4 SMR:Q9SRY4 STRING:Q9SRY4 PaxDb:Q9SRY4
PRIDE:Q9SRY4 EnsemblPlants:AT1G02910.1 GeneID:839350
KEGG:ath:AT1G02910 TAIR:At1g02910 eggNOG:NOG253077
HOGENOM:HOG000006163 InParanoid:Q9SRY4 OMA:KACCHAY PhylomeDB:Q9SRY4
ProtClustDB:PLN03098 Genevestigator:Q9SRY4 Uniprot:Q9SRY4
Length = 453
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 222 GLQLYRTGKYEVAREKFESVLGSKPTPEESSVASYNVACCYSKLNQVKAGLSALEDALLA 281
GL L++ G+ + A +FE+ L P P ES A YN ACC++ + K + L AL
Sbjct: 82 GLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKACCHAYRGEGKKAVDCLRIALRD 141
Query: 282 GYEDFKRVRTDPDLENLRASEEFDVL 307
F + DPDL + RA EF L
Sbjct: 142 YNLKFATILNDPDLASFRALPEFKEL 167
>TAIR|locus:2167150 [details] [associations]
symbol:ENH1 "enhancer of sos3-1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0046872 "metal ion binding" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009535 "chloroplast
thylakoid membrane" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009657
"plastid organization" evidence=RCA] [GO:0010114 "response to red
light" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
InterPro:IPR001478 InterPro:IPR024934 PROSITE:PS50106
PROSITE:PS50903 SMART:SM00228 InterPro:IPR004039 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005506 GO:GO:0009941
SUPFAM:SSF50156 GO:GO:0009535 EMBL:AB005238 Gene3D:2.20.28.10
EMBL:AY035119 EMBL:BT000984 IPI:IPI00531946 RefSeq:NP_568342.1
UniGene:At.22701 HSSP:P24297 ProteinModelPortal:Q9FFJ2 SMR:Q9FFJ2
IntAct:Q9FFJ2 STRING:Q9FFJ2 PRIDE:Q9FFJ2 ProMEX:Q9FFJ2
EnsemblPlants:AT5G17170.1 GeneID:831581 KEGG:ath:AT5G17170
TAIR:At5g17170 HOGENOM:HOG000012648 InParanoid:Q9FFJ2 OMA:THICLDC
PhylomeDB:Q9FFJ2 ProtClustDB:CLSN2689731 ArrayExpress:Q9FFJ2
Genevestigator:Q9FFJ2 Uniprot:Q9FFJ2
Length = 271
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00033
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 96 GLKFAKGRDGGTYIDAIAPGGSADKTGMFQVGDKVLATSAVFGTEIWPAAEYGRTMYTIR 155
GL + + GG I + GG+A K G+ + GD+V+ TS+ FG E+WPA + G T I+
Sbjct: 95 GLTLGQKQGGGVVITGVDGGGNAAKAGL-KSGDQVVYTSSFFGDELWPADKLGFTKTAIQ 153
Query: 156 QR 157
+
Sbjct: 154 AK 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 334 276 0.00079 115 3 11 22 0.37 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 604 (64 KB)
Total size of DFA: 180 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.28u 0.11s 20.39t Elapsed: 00:00:01
Total cpu time: 20.28u 0.11s 20.39t Elapsed: 00:00:01
Start: Fri May 10 11:29:31 2013 End: Fri May 10 11:29:32 2013