Query 019873
Match_columns 334
No_of_seqs 156 out of 846
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 08:22:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019873.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019873hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2di4_A Zinc protease, cell div 100.0 4.8E-34 1.7E-38 265.0 17.2 151 127-305 8-202 (238)
2 2ce7_A Cell division protein F 99.9 2.9E-25 9.8E-30 222.6 17.3 151 127-304 264-458 (476)
3 2dhr_A FTSH; AAA+ protein, hex 99.9 1.9E-24 6.5E-29 217.7 15.2 163 117-308 267-472 (499)
4 3b4r_A Putative zinc metallopr 94.2 0.022 7.4E-07 51.9 2.8 27 137-163 50-76 (224)
5 2jsd_A Matrix metalloproteinas 69.4 1.9 6.4E-05 36.1 1.8 16 133-148 106-121 (160)
6 3gpv_A Transcriptional regulat 68.1 11 0.00038 31.5 6.4 68 240-307 57-133 (148)
7 2xs4_A Karilysin protease; hyd 66.9 2.2 7.7E-05 36.1 1.8 15 133-147 113-127 (167)
8 1q08_A Zn(II)-responsive regul 66.5 16 0.00054 27.8 6.5 62 241-302 1-72 (99)
9 3gp4_A Transcriptional regulat 65.9 23 0.00078 29.5 7.8 65 240-304 43-116 (142)
10 2ovx_A Matrix metalloproteinas 64.6 2.2 7.5E-05 36.2 1.3 14 134-147 110-123 (159)
11 1hy7_A Stromelysin-1, MMP-3; m 64.3 2.7 9.2E-05 36.0 1.8 16 133-148 111-126 (173)
12 1cge_A Fibroblast collagenase; 61.2 2.8 9.6E-05 35.8 1.3 14 134-147 110-123 (168)
13 1hv5_A Stromelysin 3; inhibiti 60.4 2.9 9.9E-05 35.5 1.3 15 133-147 111-125 (165)
14 3cqb_A Probable protease HTPX 58.7 5.4 0.00018 31.7 2.5 21 130-150 78-98 (107)
15 1i76_A MMP-8;, neutrophil coll 57.4 4.3 0.00015 34.5 1.9 15 134-148 111-125 (163)
16 1slm_A Stromelysin-1; hydrolas 50.8 5.1 0.00017 36.9 1.3 15 134-148 194-208 (255)
17 1y93_A Macrophage metalloelast 50.4 5.3 0.00018 33.8 1.3 15 133-147 106-120 (159)
18 3ezq_A Tumor necrosis factor r 50.2 49 0.0017 27.3 7.1 49 243-291 20-78 (115)
19 2y6d_A Matrilysin; hydrolase; 50.0 6.5 0.00022 33.8 1.8 15 133-147 113-127 (174)
20 1rm8_A MMP-16, matrix metallop 49.7 6.7 0.00023 33.3 1.8 17 132-148 114-130 (169)
21 3ayu_A 72 kDa type IV collagen 48.8 6.5 0.00022 33.6 1.6 14 134-147 113-126 (167)
22 1sat_A Serratia protease; para 44.3 9.7 0.00033 37.9 2.3 16 133-148 168-183 (471)
23 1ich_A TNF-1, tumor necrosis f 43.7 45 0.0015 27.5 5.8 62 245-307 27-99 (112)
24 2cki_A Ulilysin; metalloprotea 43.3 7.7 0.00026 36.0 1.3 16 134-149 161-176 (262)
25 1g9k_A Serralysin; beta jelly 43.3 10 0.00035 37.7 2.3 15 134-148 162-176 (463)
26 1c7k_A NCNP, zinc endoprotease 42.7 11 0.00039 31.8 2.1 14 134-147 76-89 (132)
27 1kap_P Alkaline protease; calc 42.2 11 0.00037 37.7 2.3 15 134-148 178-192 (479)
28 1k7i_A PROC, secreted protease 40.6 12 0.00041 37.4 2.3 16 133-148 180-195 (479)
29 3oq9_A Tumor necrosis factor r 40.6 19 0.00064 28.2 2.9 48 244-291 13-70 (86)
30 1r8e_A Multidrug-efflux transp 36.1 34 0.0012 30.3 4.3 65 240-304 47-114 (278)
31 1q06_A Transcriptional regulat 36.0 1.2E+02 0.0041 24.6 7.4 50 240-289 41-98 (135)
32 830c_A MMP-13, MMP-13; matrix 34.9 13 0.00044 32.0 1.3 16 133-148 111-126 (168)
33 1fad_A Protein (FADD protein); 31.2 1.7E+02 0.0059 22.2 7.8 48 245-292 27-84 (99)
34 3qao_A LMO0526 protein, MERR-l 31.0 54 0.0018 29.8 4.8 24 240-263 44-69 (249)
35 3ma2_D Matrix metalloproteinas 30.7 17 0.00057 31.8 1.3 15 133-147 120-134 (181)
36 3ba0_A Macrophage metalloelast 29.6 20 0.00069 34.3 1.8 15 134-148 106-120 (365)
37 3sks_A Putative oligoendopepti 29.6 32 0.0011 34.7 3.3 18 137-154 355-372 (567)
38 4aw6_A CAAX prenyl protease 1 28.6 30 0.001 34.8 2.8 24 129-152 323-346 (482)
39 3ahn_A Oligopeptidase, PZ pept 28.0 36 0.0012 33.9 3.3 17 137-153 352-368 (564)
40 3edh_A Bone morphogenetic prot 26.7 24 0.00082 31.2 1.6 19 135-153 87-105 (201)
41 2vz4_A Tipal, HTH-type transcr 26.3 60 0.0021 25.3 3.8 45 240-284 42-88 (108)
42 1r8d_A Transcription activator 26.2 69 0.0024 24.9 4.1 48 240-287 43-92 (109)
43 1l6j_A Matrix metalloproteinas 25.5 21 0.00072 35.5 1.1 14 134-147 375-388 (425)
44 3lqb_A Hatching enzyme, LOC792 25.4 26 0.00089 31.1 1.6 36 135-170 93-130 (199)
45 2o36_A ThiMet oligopeptidase; 25.4 43 0.0015 34.5 3.4 18 137-154 454-471 (674)
46 3c37_A Peptidase, M48 family; 25.2 35 0.0012 30.7 2.4 22 131-152 96-117 (253)
47 2o71_A Death domain-containing 25.1 2.4E+02 0.0083 22.7 7.3 47 245-291 37-93 (115)
48 2o3e_A Neurolysin; thermolysin 24.8 37 0.0013 35.0 2.8 17 137-153 470-486 (678)
49 3hh0_A Transcriptional regulat 24.0 1.1E+02 0.0039 25.3 5.3 20 241-260 46-67 (146)
50 1eak_A 72 kDa type IV collagen 23.2 25 0.00084 35.0 1.1 15 134-148 365-379 (421)
51 1uze_A Angiotensin converting 22.6 32 0.0011 34.9 1.8 13 137-149 343-355 (589)
52 3lq0_A Proastacin; metallopept 22.6 32 0.0011 31.3 1.6 36 135-170 120-157 (235)
53 3dte_A IRRE protein; radiotole 21.8 55 0.0019 30.9 3.1 22 130-151 91-112 (301)
54 3ezq_B Protein FADD; apoptosis 21.7 3.3E+02 0.011 22.1 7.7 47 245-291 19-75 (122)
55 2gf5_A FADD protein; death dom 20.9 1.4E+02 0.0049 25.7 5.4 66 245-311 111-186 (191)
56 2x96_A Angiotensin converting 20.7 44 0.0015 34.3 2.4 15 134-148 344-358 (598)
57 2yqf_A Ankyrin-1; death domain 20.3 1.1E+02 0.0036 24.2 4.2 33 246-278 32-68 (111)
No 1
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=100.00 E-value=4.8e-34 Score=264.96 Aligned_cols=151 Identities=19% Similarity=0.161 Sum_probs=120.8
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHhC--CCCCceecCchhhhcccccccceeEEecchhhHHHHHHhhhcccCCCCCCC
Q 019873 127 YVSLKEEDHFMCVQHEAGHFLTGYLLG--VLPKGYEIPSVEALKQDDFTVGRVQFVGFDFLKEVADARKQKKDTGQVGSW 204 (334)
Q Consensus 127 ~r~ls~eer~RIA~HEAGHaLVAyLLg--iPV~gyTI~p~eal~~G~~g~gGv~f~~~e~~~e~~e~r~~~~d~~~~~~~ 204 (334)
++.+|+++|++||||||||||||++++ .||++|||+|+ | + .+|+++..|+ +
T Consensus 8 ~~~~s~~ek~~vAyHEAGHAlva~~l~~~~pV~KVTIiPR-----G-~-alG~t~~~P~-------------e------- 60 (238)
T 2di4_A 8 HMTISPKEKEKIAIHEAGHALMGLVSDDDDKVHKISIIPR-----G-M-ALGVTQQLPI-------------E------- 60 (238)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHCSSCCCCCCEECC------------------------------------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeEEEEeec-----C-C-cceEEEeCCc-------------c-------
Confidence 467899999999999999999999999 79999999992 3 1 2344333222 1
Q ss_pred CcccccCHHHHHHHHHHHhhHHHHHHHHh--CC-ccchhhHHHHHHHHHHH----hCCCcc-------------------
Q 019873 205 GNRGEISVKTLNNFSCVILGGLVAEHLVF--GH-SEGHYSDINKLDKVFQW----LGYNKS------------------- 258 (334)
Q Consensus 205 ~~~~~~t~~~L~r~~~VlLAGrAAE~Lvf--G~-atGg~~Dl~qat~l~r~----lGms~~------------------- 258 (334)
+++.+|+++|.+.++|+|||||||+|+| |+ ++|++||++++|+|++. ||||+.
T Consensus 61 -d~~~~tk~~l~~~i~v~LgGRaAEelifG~g~vttGA~~Dl~~AT~iAr~MV~~~GMs~~lG~v~~~~~~~~flg~~~~ 139 (238)
T 2di4_A 61 -DKHIYDKKDLYNKILVLLGGRAAEEVFFGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAIRRVANPFLGGMTT 139 (238)
T ss_dssp --CCCCBHHHHHHHHHHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC----------C
T ss_pred -cccccCHHHHHHHHHHHHhHHHHHHHHhCCCCcccChHhHHHHHHHHHHHHHHHhCCCCCCCceeecCCcccccccccc
Confidence 5788999999999999999999999999 55 68999999999999875 899852
Q ss_pred ----------hhHHHHH----HHHHHHHHHHHHcHHHHHHHHHHHHhhCcH--HHHHHHHhch
Q 019873 259 ----------EADSQVK----WAALNTVLISHHHIQVRSRLAEAMALGRSI--GSYTSKILTE 305 (334)
Q Consensus 259 ----------~id~evr----~A~~~A~~LL~~hr~aleaLAeaL~e~esl--~eci~~Ie~~ 305 (334)
.+|.+++ +||.+|++||++|++.+++||++|++++|| +++.++|+..
T Consensus 140 ~~~~Se~ta~~iD~Ev~~il~~ay~~a~~iL~~nr~~L~~lA~~Lle~EtL~~~ei~~il~~~ 202 (238)
T 2di4_A 140 AVDTSPDLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVFKLY 202 (238)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHHccC
Confidence 2456654 899999999999999999999999999999 5888888653
No 2
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=99.93 E-value=2.9e-25 Score=222.58 Aligned_cols=151 Identities=18% Similarity=0.199 Sum_probs=118.5
Q ss_pred CCCCChhHHHHHHHHhHHHHHHHHHhC--CCCCceecCchhhhcccccccceeEEecchhhHHHHHHhhhcccCCCCCCC
Q 019873 127 YVSLKEEDHFMCVQHEAGHFLTGYLLG--VLPKGYEIPSVEALKQDDFTVGRVQFVGFDFLKEVADARKQKKDTGQVGSW 204 (334)
Q Consensus 127 ~r~ls~eer~RIA~HEAGHaLVAyLLg--iPV~gyTI~p~eal~~G~~g~gGv~f~~~e~~~e~~e~r~~~~d~~~~~~~ 204 (334)
...++++++++++|||+||++++++++ .|++++||.| +|. ..+|+++..|+ +
T Consensus 264 ~~~~~~~e~~~~a~~e~G~a~~~~~l~~~~~~~~~~i~p-----rg~-~alg~~~~~p~-------------~------- 317 (476)
T 2ce7_A 264 SLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIP-----RGY-KALGYTLHLPE-------------E------- 317 (476)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHSTTCCCCCEEECC------------------------------------------
T ss_pred chhhhcchhhhhHHHHhhhHHHhhccCCccccceeeeec-----Ccc-cccceEEEcCc-------------c-------
Confidence 346799999999999999999999998 6999999999 221 12333332221 1
Q ss_pred CcccccCHHHHHHHHHHHhhHHHHHHHHhCC-ccchhhHHHHHHHHHHH----hCCCcc---------------------
Q 019873 205 GNRGEISVKTLNNFSCVILGGLVAEHLVFGH-SEGHYSDINKLDKVFQW----LGYNKS--------------------- 258 (334)
Q Consensus 205 ~~~~~~t~~~L~r~~~VlLAGrAAE~LvfG~-atGg~~Dl~qat~l~r~----lGms~~--------------------- 258 (334)
+++.+|+.+|.+.++|+|||||||+++||+ ++|++||++++|++++. ||||+.
T Consensus 318 -~~~~~~~~~l~~~i~~~l~Gr~ae~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~~~~~~~~~~~~~ 396 (476)
T 2ce7_A 318 -DKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKEEQEVFLGKEITR 396 (476)
T ss_dssp --CCSCBHHHHHHHHHHHTHHHHHHHHHHSSCCGGGHHHHHHHHHHHHHHHHTSCCCTTTCSCCCCC-------------
T ss_pred -cccccCHHHHHHHHHHHHhHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHhCCCCcCCceeecCCCccccccccccc
Confidence 578899999999999999999999999998 47999999999999875 788751
Q ss_pred ----------hhHHHHH----HHHHHHHHHHHHcHHHHHHHHHHHHhhCcH--HHHHHHHhc
Q 019873 259 ----------EADSQVK----WAALNTVLISHHHIQVRSRLAEAMALGRSI--GSYTSKILT 304 (334)
Q Consensus 259 ----------~id~evr----~A~~~A~~LL~~hr~aleaLAeaL~e~esl--~eci~~Ie~ 304 (334)
.+|.+++ .||.+|++||++|++.+++||++|+++||| +++.++++.
T Consensus 397 ~~~~s~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~ 458 (476)
T 2ce7_A 397 LRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE 458 (476)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEEEHHHHHHHTC-
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCeeCHHHHHHHhcc
Confidence 1455554 799999999999999999999999999999 588888765
No 3
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=99.91 E-value=1.9e-24 Score=217.74 Aligned_cols=163 Identities=18% Similarity=0.161 Sum_probs=132.6
Q ss_pred hhhHHhhcc--cCCCCChhHHHHHHHHhHHHHHHHHHhC--CCCCceecCchhhhcccccccceeEEecchhhHHHHHHh
Q 019873 117 TVESIVEDG--SYVSLKEEDHFMCVQHEAGHFLTGYLLG--VLPKGYEIPSVEALKQDDFTVGRVQFVGFDFLKEVADAR 192 (334)
Q Consensus 117 ~~~~llld~--~~r~ls~eer~RIA~HEAGHaLVAyLLg--iPV~gyTI~p~eal~~G~~g~gGv~f~~~e~~~e~~e~r 192 (334)
++..++... .++.+++++|++++|||+||++|+|+++ .||+++||.| +| ...|+.+ | ++.
T Consensus 267 al~~v~~~~~~~~~~~~~~e~~~~a~~e~g~av~~~~l~~~~~v~~~~i~p-----r~--~~~g~~~--p---~q~---- 330 (499)
T 2dhr_A 267 AADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVP-----RG--RALGFMM--P---RRE---- 330 (499)
T ss_dssp HHHHHTTCSSSSCCCCCTTHHHHHHHHHHHHHHHHCCSSSCCCCCCEESCC-----SS--CTTCSSH--H---HHT----
T ss_pred HHHHHhcccccccchhhHHHHhhhHHHHHHHHHHHhhcCCCCeeeEEEeec-----CC--CcCcccc--c---chh----
Confidence 345555542 2456899999999999999999999997 5999999999 22 2345444 2 111
Q ss_pred hhcccCCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHhCC-ccchhhHHHHHHHHHHH----hCCCcc---------
Q 019873 193 KQKKDTGQVGSWGNRGEISVKTLNNFSCVILGGLVAEHLVFGH-SEGHYSDINKLDKVFQW----LGYNKS--------- 258 (334)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~t~~~L~r~~~VlLAGrAAE~LvfG~-atGg~~Dl~qat~l~r~----lGms~~--------- 258 (334)
+.+.+|+.++...++++|||||||+++||+ ++|++||++++|++++. ||||++
T Consensus 331 -------------~~~~~t~~~l~~~i~~~lgGr~ae~~~~g~~~~ga~~Dl~~at~~a~~mv~~~gm~~~~g~~~~~~~ 397 (499)
T 2dhr_A 331 -------------DMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVR 397 (499)
T ss_dssp -------------TCCCCCHHHHHHHHHHHHHHHHHHHHHSCSCCBCCCHHHHHHHHHHHHHHTTSCCCSSSCSCCCCCC
T ss_pred -------------hhhccCHHHHHHHHHHHhhhHhHHHhhhcccCcccHHHHHHHHHHHHHHHHHhCCCCCCCceeecCC
Confidence 578899999999999999999999999998 57999999999999885 788752
Q ss_pred -------------------hhHHHH----HHHHHHHHHHHHHcHHHHHHHHHHHHhhCcH--HHHHHHHhchhhh
Q 019873 259 -------------------EADSQV----KWAALNTVLISHHHIQVRSRLAEAMALGRSI--GSYTSKILTEQSL 308 (334)
Q Consensus 259 -------------------~id~ev----r~A~~~A~~LL~~hr~aleaLAeaL~e~esl--~eci~~Ie~~~~~ 308 (334)
.+|.++ .+||.+|++||++|++.+++||++|+++||| +++.++++.....
T Consensus 398 ~~~~~~~~~~~~~s~~~~~~i~~~v~~~~~~~~~~~~~~l~~~~~~l~~~a~~l~~~e~l~~~~~~~~~~~~~~~ 472 (499)
T 2dhr_A 398 EDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLE 472 (499)
T ss_dssp CCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSEECHHHHHHHHTTCCCC
T ss_pred CccccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCHHHHHHHhccCCCC
Confidence 145554 4799999999999999999999999999999 5888888875443
No 4
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=94.21 E-value=0.022 Score=51.87 Aligned_cols=27 Identities=26% Similarity=0.220 Sum_probs=25.4
Q ss_pred HHHHHhHHHHHHHHHhCCCCCceecCc
Q 019873 137 MCVQHEAGHFLTGYLLGVLPKGYEIPS 163 (334)
Q Consensus 137 RIA~HEAGHaLVAyLLgiPV~gyTI~p 163 (334)
-+..||.||+++|+..|++++++++.|
T Consensus 50 ~v~~HElgH~~~A~~~G~~~~~i~l~p 76 (224)
T 3b4r_A 50 SVVLHELGHSYVAKKYGVKIEKILLLP 76 (224)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCEEECS
T ss_pred HHHHHHHHHHHHHHHcCCccccEEEEE
Confidence 478899999999999999999999988
No 5
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=69.36 E-value=1.9 Score=36.14 Aligned_cols=16 Identities=38% Similarity=0.484 Sum_probs=13.2
Q ss_pred hHHHHHHHHhHHHHHH
Q 019873 133 EDHFMCVQHEAGHFLT 148 (334)
Q Consensus 133 eer~RIA~HEAGHaLV 148 (334)
-+...|+.||.||+|=
T Consensus 106 ~~~~~v~~HEiGHaLG 121 (160)
T 2jsd_A 106 FNLFTVAAHEFGHALG 121 (160)
T ss_dssp EEHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhHhhhc
Confidence 3567899999999973
No 6
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=68.13 E-value=11 Score=31.52 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=45.1
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHh-hCcHHHHHHHHhchhh
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQVKW------AALNTVLISHHHIQVRSRLAEAMAL-GRSIGSYTSKILTEQS 307 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~evr~------A~~~A~~LL~~hr~aleaLAeaL~e-~esl~eci~~Ie~~~~ 307 (334)
.+|+.++..| ++.+|||.++|..-+.. ...+...+|+++...+++-.+.|.+ ...|+..++.++....
T Consensus 57 ~~dl~~l~~I~~lr~~G~sL~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~ 133 (148)
T 3gpv_A 57 EEALKYLEMILCLKNTGMPIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEIS 133 (148)
T ss_dssp HHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888887 55699998887766542 3456678888888888777666665 3466677766666543
No 7
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=66.90 E-value=2.2 Score=36.13 Aligned_cols=15 Identities=40% Similarity=0.618 Sum_probs=12.9
Q ss_pred hHHHHHHHHhHHHHH
Q 019873 133 EDHFMCVQHEAGHFL 147 (334)
Q Consensus 133 eer~RIA~HEAGHaL 147 (334)
.+...|+.||.||+|
T Consensus 113 ~~~~~v~~HEiGHaL 127 (167)
T 2xs4_A 113 IDLITVAAHEIGHLL 127 (167)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhh
Confidence 467789999999986
No 8
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=66.53 E-value=16 Score=27.84 Aligned_cols=62 Identities=15% Similarity=0.180 Sum_probs=39.5
Q ss_pred hHHHHHHHH--HHHhCCCcchhHHHHHH-------HHHHHHHHHHHcHHHHHHHHHHHHh-hCcHHHHHHHH
Q 019873 241 SDINKLDKV--FQWLGYNKSEADSQVKW-------AALNTVLISHHHIQVRSRLAEAMAL-GRSIGSYTSKI 302 (334)
Q Consensus 241 ~Dl~qat~l--~r~lGms~~~id~evr~-------A~~~A~~LL~~hr~aleaLAeaL~e-~esl~eci~~I 302 (334)
+|+..+..| ++.+|||-++|..-+.. .......+|++|...++.=-+.|.+ ...|...++..
T Consensus 1 ~dl~rL~~I~~lr~lGfsL~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~~~~~ 72 (99)
T 1q08_A 1 SDLQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDAC 72 (99)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCCHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477777777 67799999887765542 2345677888888777766665544 22344433333
No 9
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=65.91 E-value=23 Score=29.51 Aligned_cols=65 Identities=6% Similarity=-0.103 Sum_probs=40.4
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHHHHH------HHHHHHHHHHHcHHHHHHHHHHHHh-hCcHHHHHHHHhc
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQVKW------AALNTVLISHHHIQVRSRLAEAMAL-GRSIGSYTSKILT 304 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~evr~------A~~~A~~LL~~hr~aleaLAeaL~e-~esl~eci~~Ie~ 304 (334)
.+|+..+..| ++.+|||.++|..-+.. ......++|+++...+++-.+.|.+ ...|...++..+.
T Consensus 43 ~~dl~~l~~I~~lr~~G~sL~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~ 116 (142)
T 3gp4_A 43 AEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDT 116 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678777776 56689998777655432 3445567777777777666655555 3344544444443
No 10
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=64.62 E-value=2.2 Score=36.18 Aligned_cols=14 Identities=36% Similarity=0.667 Sum_probs=12.2
Q ss_pred HHHHHHHHhHHHHH
Q 019873 134 DHFMCVQHEAGHFL 147 (334)
Q Consensus 134 er~RIA~HEAGHaL 147 (334)
+...|+.||.||+|
T Consensus 110 ~~~~va~HEiGHaL 123 (159)
T 2ovx_A 110 SLFLVAAHQFGHAL 123 (159)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhh
Confidence 56789999999986
No 11
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=64.28 E-value=2.7 Score=35.97 Aligned_cols=16 Identities=38% Similarity=0.654 Sum_probs=13.0
Q ss_pred hHHHHHHHHhHHHHHH
Q 019873 133 EDHFMCVQHEAGHFLT 148 (334)
Q Consensus 133 eer~RIA~HEAGHaLV 148 (334)
-+...|+.||.||+|=
T Consensus 111 ~~~~~v~~HEiGHaLG 126 (173)
T 1hy7_A 111 TNLFLVAAHEIGHSLG 126 (173)
T ss_dssp EEHHHHHHHHHHHHHT
T ss_pred chhhhhHHHHHHHhhc
Confidence 3467899999999973
No 12
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=61.21 E-value=2.8 Score=35.77 Aligned_cols=14 Identities=36% Similarity=0.491 Sum_probs=12.1
Q ss_pred HHHHHHHHhHHHHH
Q 019873 134 DHFMCVQHEAGHFL 147 (334)
Q Consensus 134 er~RIA~HEAGHaL 147 (334)
+...|+.||.||+|
T Consensus 110 ~~~~v~~HEiGHaL 123 (168)
T 1cge_A 110 NLHRVAAHELGHSL 123 (168)
T ss_dssp BHHHHHHHHHHHHT
T ss_pred chhhhhhhHhHhhh
Confidence 46789999999986
No 13
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=60.37 E-value=2.9 Score=35.49 Aligned_cols=15 Identities=40% Similarity=0.614 Sum_probs=12.8
Q ss_pred hHHHHHHHHhHHHHH
Q 019873 133 EDHFMCVQHEAGHFL 147 (334)
Q Consensus 133 eer~RIA~HEAGHaL 147 (334)
.+...|+.||.||+|
T Consensus 111 ~~~~~v~~HEiGHaL 125 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVL 125 (165)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhHHHHhHhhh
Confidence 456789999999986
No 14
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=58.73 E-value=5.4 Score=31.73 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=17.6
Q ss_pred CChhHHHHHHHHhHHHHHHHH
Q 019873 130 LKEEDHFMCVQHEAGHFLTGY 150 (334)
Q Consensus 130 ls~eer~RIA~HEAGHaLVAy 150 (334)
++++|..-|+.||.||..-.+
T Consensus 78 l~~~El~aVlaHElgH~~~~h 98 (107)
T 3cqb_A 78 MTRDEAEAVLAHEVSHIANGD 98 (107)
T ss_dssp SCHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHCCC
Confidence 388999999999999986443
No 15
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=57.39 E-value=4.3 Score=34.47 Aligned_cols=15 Identities=40% Similarity=0.667 Sum_probs=12.6
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
+...|+.||.||+|=
T Consensus 111 ~~~~v~~HE~GHalG 125 (163)
T 1i76_A 111 NLFLVAAHEFGHSLG 125 (163)
T ss_dssp BHHHHHHHHHHHHHT
T ss_pred hhhhhhHHHhhhhhc
Confidence 467899999999863
No 16
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=50.76 E-value=5.1 Score=36.87 Aligned_cols=15 Identities=40% Similarity=0.700 Sum_probs=12.7
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
+...|+.||.||+|=
T Consensus 194 ~l~~va~HEiGHaLG 208 (255)
T 1slm_A 194 NLFLVAAHEIGHSLG 208 (255)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred eehhhhHHHHHHHhc
Confidence 467899999999864
No 17
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=50.40 E-value=5.3 Score=33.82 Aligned_cols=15 Identities=40% Similarity=0.682 Sum_probs=12.5
Q ss_pred hHHHHHHHHhHHHHH
Q 019873 133 EDHFMCVQHEAGHFL 147 (334)
Q Consensus 133 eer~RIA~HEAGHaL 147 (334)
-+...|+.||.||+|
T Consensus 106 ~~~~~~~~HE~GH~l 120 (159)
T 1y93_A 106 TNLFLTAVHEIGHSL 120 (159)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhhhhh
Confidence 356789999999985
No 18
>3ezq_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} SCOP: a.77.1.2 PDB: 1ddf_A
Probab=50.18 E-value=49 Score=27.29 Aligned_cols=49 Identities=12% Similarity=0.127 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCCCcchhHHHH----HHHHHHHHHHHHHc------HHHHHHHHHHHHh
Q 019873 243 INKLDKVFQWLGYNKSEADSQV----KWAALNTVLISHHH------IQVRSRLAEAMAL 291 (334)
Q Consensus 243 l~qat~l~r~lGms~~~id~ev----r~A~~~A~~LL~~h------r~aleaLAeaL~e 291 (334)
+.+..+++|.+|+|+.+||.-. +...++..++|+.. ..++..|.++|..
T Consensus 20 ~~~wK~laR~LGlse~~Id~I~~d~~~d~~Eq~~qlLr~W~~~~G~~aa~~~Li~aLr~ 78 (115)
T 3ezq_A 20 LSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKK 78 (115)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHhhHHHHHHcCCCChHHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 3567788999999999888543 33668888888754 4588888888876
No 19
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=50.03 E-value=6.5 Score=33.82 Aligned_cols=15 Identities=33% Similarity=0.534 Sum_probs=12.8
Q ss_pred hHHHHHHHHhHHHHH
Q 019873 133 EDHFMCVQHEAGHFL 147 (334)
Q Consensus 133 eer~RIA~HEAGHaL 147 (334)
.+...|+.||.||+|
T Consensus 113 ~~~~~~~~HE~gH~l 127 (174)
T 2y6d_A 113 INFLYAATHELGHSL 127 (174)
T ss_dssp EEHHHHHHHHHHHHH
T ss_pred ceeeehhhHHhHhhh
Confidence 456789999999986
No 20
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=49.72 E-value=6.7 Score=33.28 Aligned_cols=17 Identities=41% Similarity=0.645 Sum_probs=13.8
Q ss_pred hhHHHHHHHHhHHHHHH
Q 019873 132 EEDHFMCVQHEAGHFLT 148 (334)
Q Consensus 132 ~eer~RIA~HEAGHaLV 148 (334)
..+...|+.||.||+|=
T Consensus 114 g~~~~~~~~he~gh~lg 130 (169)
T 1rm8_A 114 GNDLFLVAVHELGHALG 130 (169)
T ss_dssp SEEHHHHHHHHHHHHHT
T ss_pred cceeeeehhhhhhhhcC
Confidence 35678899999999863
No 21
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=48.79 E-value=6.5 Score=33.59 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=12.1
Q ss_pred HHHHHHHHhHHHHH
Q 019873 134 DHFMCVQHEAGHFL 147 (334)
Q Consensus 134 er~RIA~HEAGHaL 147 (334)
+...|+.||.||+|
T Consensus 113 ~~~~~~~HE~gH~l 126 (167)
T 3ayu_A 113 SLFLVAAHAFGHAM 126 (167)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cceeehhhhhHHhc
Confidence 45789999999986
No 22
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=44.31 E-value=9.7 Score=37.92 Aligned_cols=16 Identities=31% Similarity=0.333 Sum_probs=12.9
Q ss_pred hHHHHHHHHhHHHHHH
Q 019873 133 EDHFMCVQHEAGHFLT 148 (334)
Q Consensus 133 eer~RIA~HEAGHaLV 148 (334)
.+...||.||-||+|=
T Consensus 168 ~~~~~va~HEiGHaLG 183 (471)
T 1sat_A 168 DYGRQTFTHEIGHALG 183 (471)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccceeeeeecccccc
Confidence 3456899999999973
No 23
>1ich_A TNF-1, tumor necrosis factor receptor-1; death domain, apoptosis; NMR {Homo sapiens} SCOP: a.77.1.2
Probab=43.74 E-value=45 Score=27.46 Aligned_cols=62 Identities=10% Similarity=0.024 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCcchhHHHH----HHHHHHHHHHHHHcH-------HHHHHHHHHHHhhCcHHHHHHHHhchhh
Q 019873 245 KLDKVFQWLGYNKSEADSQV----KWAALNTVLISHHHI-------QVRSRLAEAMALGRSIGSYTSKILTEQS 307 (334)
Q Consensus 245 qat~l~r~lGms~~~id~ev----r~A~~~A~~LL~~hr-------~aleaLAeaL~e~esl~eci~~Ie~~~~ 307 (334)
+..+++|.+|+|+.+||.-. |...++..++|+.-+ ..++.|.++|.+ --+..|.+.|+..+.
T Consensus 27 ~WK~~aRkLGLse~~Id~Ie~~~~r~l~Eq~yqmLr~W~~~~G~~~Atv~~L~~aLr~-~~l~~~ae~Ie~~l~ 99 (112)
T 1ich_A 27 RWKEFVKRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRD-MDLLGCLEDIEEALC 99 (112)
T ss_dssp THHHHHHHHTCCHHHHHHHHHHCCSCHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHH-TTCHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHCcCChHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHH-hccHHHHHHHHHHHh
Confidence 45667888999998887543 235666777776322 258899999884 445566666666543
No 24
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=43.32 E-value=7.7 Score=35.97 Aligned_cols=16 Identities=38% Similarity=0.482 Sum_probs=12.7
Q ss_pred HHHHHHHHhHHHHHHH
Q 019873 134 DHFMCVQHEAGHFLTG 149 (334)
Q Consensus 134 er~RIA~HEAGHaLVA 149 (334)
..-+++.||.||+|=-
T Consensus 161 n~g~TltHEvGH~LGL 176 (262)
T 2cki_A 161 DKGRTATHEIGHWLNL 176 (262)
T ss_dssp CSSHHHHHHHHHHTTC
T ss_pred cccchhhhhhhhhhcc
Confidence 3468999999998743
No 25
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=43.31 E-value=10 Score=37.75 Aligned_cols=15 Identities=33% Similarity=0.335 Sum_probs=12.8
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
+...|+.||.||+|=
T Consensus 162 ~~~~va~HEiGHaLG 176 (463)
T 1g9k_A 162 YGRQTLTHEIGHTLG 176 (463)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhhc
Confidence 557899999999974
No 26
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=42.72 E-value=11 Score=31.79 Aligned_cols=14 Identities=43% Similarity=0.650 Sum_probs=11.8
Q ss_pred HHHHHHHHhHHHHH
Q 019873 134 DHFMCVQHEAGHFL 147 (334)
Q Consensus 134 er~RIA~HEAGHaL 147 (334)
...+|+.||-||.|
T Consensus 76 ~~~~v~aHE~GH~L 89 (132)
T 1c7k_A 76 DSTRVTAHETGHVL 89 (132)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CCceEEeeeehhcc
Confidence 35689999999986
No 27
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=42.21 E-value=11 Score=37.72 Aligned_cols=15 Identities=33% Similarity=0.335 Sum_probs=12.7
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
+...|+.||.||+|=
T Consensus 178 ~~~~va~HEIGHaLG 192 (479)
T 1kap_P 178 YGRQTLTHEIGHTLG 192 (479)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred ccceeehhhhhhhhc
Confidence 567899999999874
No 28
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=40.59 E-value=12 Score=37.38 Aligned_cols=16 Identities=38% Similarity=0.351 Sum_probs=12.8
Q ss_pred hHHHHHHHHhHHHHHH
Q 019873 133 EDHFMCVQHEAGHFLT 148 (334)
Q Consensus 133 eer~RIA~HEAGHaLV 148 (334)
.+...|+.||-||+|=
T Consensus 180 ~~~~~va~HEiGHaLG 195 (479)
T 1k7i_A 180 EYGRQTFTHEIGHALG 195 (479)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred cccccccHHHHHHhhc
Confidence 3446899999999973
No 29
>3oq9_A Tumor necrosis factor receptor superfamily member; apoptosis, DISC, FAS; 6.80A {Mus musculus}
Probab=40.56 E-value=19 Score=28.24 Aligned_cols=48 Identities=10% Similarity=0.023 Sum_probs=33.1
Q ss_pred HHHHHHHHHhCCCcchhHHHH----HHHHHHHHHHHHHcH------HHHHHHHHHHHh
Q 019873 244 NKLDKVFQWLGYNKSEADSQV----KWAALNTVLISHHHI------QVRSRLAEAMAL 291 (334)
Q Consensus 244 ~qat~l~r~lGms~~~id~ev----r~A~~~A~~LL~~hr------~aleaLAeaL~e 291 (334)
.+..+++|.+|+|+.+||.-. +...++..++|+... .+++.|.++|..
T Consensus 13 ~~wK~~~R~LGlse~~Id~I~~~~~~d~~Eq~~qmL~~W~~~~g~~a~~~~Li~~Lr~ 70 (86)
T 3oq9_A 13 QEAKKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKSDAYQDLIKGLKK 70 (86)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHTCTTCCTTHHHHHHHHHHHHSCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHhHHHHHHHhCCCChHHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 456778999999999888543 234466666666544 566777777765
No 30
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=36.14 E-value=34 Score=30.29 Aligned_cols=65 Identities=9% Similarity=0.111 Sum_probs=39.3
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHh-hCcHHHHHHHHhc
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQVKWAALNTVLISHHHIQVRSRLAEAMAL-GRSIGSYTSKILT 304 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~evr~A~~~A~~LL~~hr~aleaLAeaL~e-~esl~eci~~Ie~ 304 (334)
.+|+.++..| ++.+|||.++|..-+........++|+++...+++-.+.|.+ ...|+..++.++.
T Consensus 47 ~~~~~~l~~i~~l~~~g~~l~~i~~~~~~~~~~~~~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~~~~ 114 (278)
T 1r8e_A 47 DSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFLSALEQTISLVKKRMKR 114 (278)
T ss_dssp TGGGGHHHHHHHHHHTTCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678877776 567999987766543221345667777777766655555544 3345554444443
No 31
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=36.02 E-value=1.2e+02 Score=24.64 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=28.5
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHHHHH------HHHHHHHHHHHcHHHHHHHHHHH
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQVKW------AALNTVLISHHHIQVRSRLAEAM 289 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~evr~------A~~~A~~LL~~hr~aleaLAeaL 289 (334)
.+|+..+..| ++.+|||.++|..-+.. ......++|+++...+++-.+.|
T Consensus 41 ~~dl~~l~~I~~lr~~G~sl~eI~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L 98 (135)
T 1q06_A 41 QQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEEL 98 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567766665 45688887766554432 12345566666666655444444
No 32
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=34.92 E-value=13 Score=32.01 Aligned_cols=16 Identities=38% Similarity=0.569 Sum_probs=13.0
Q ss_pred hHHHHHHHHhHHHHHH
Q 019873 133 EDHFMCVQHEAGHFLT 148 (334)
Q Consensus 133 eer~RIA~HEAGHaLV 148 (334)
-+...|+.||.||+|=
T Consensus 111 ~~l~~v~~hE~Gh~lG 126 (168)
T 830c_A 111 YNLFLVAAHEFGHSLG 126 (168)
T ss_dssp EEHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhcchhc
Confidence 3567899999999863
No 33
>1fad_A Protein (FADD protein); apoptosis, death domain; NMR {Mus musculus} SCOP: a.77.1.2
Probab=31.20 E-value=1.7e+02 Score=22.20 Aligned_cols=48 Identities=10% Similarity=-0.037 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCCcchhHHHH-H---HHHHHHHHHHHHcH------HHHHHHHHHHHhh
Q 019873 245 KLDKVFQWLGYNKSEADSQV-K---WAALNTVLISHHHI------QVRSRLAEAMALG 292 (334)
Q Consensus 245 qat~l~r~lGms~~~id~ev-r---~A~~~A~~LL~~hr------~aleaLAeaL~e~ 292 (334)
.-.++++.+||++.+|+.-. + .-..++.++|+.-+ ..++.|.++|.+-
T Consensus 27 ~Wk~Lar~Lg~~~~~I~~I~~~~~~d~~eq~~~mL~~W~~~~g~~At~~~L~~AL~~~ 84 (99)
T 1fad_A 27 DWKRLARELKVSEAKMDGIEEKYPRSLSERVRESLKVWKNAEKKNASVAGLVKALRTC 84 (99)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHGGGGSHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHC
Confidence 45567888999988876532 2 24567777776543 3456677776653
No 34
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=31.02 E-value=54 Score=29.75 Aligned_cols=24 Identities=21% Similarity=0.421 Sum_probs=16.1
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHH
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQ 263 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~e 263 (334)
.+|+..+..| ++.+|||.++|..-
T Consensus 44 ~~dl~~L~~I~~lr~~G~sL~eIk~~ 69 (249)
T 3qao_A 44 EKDVDKLQQILFFKELDFPLKKIQQI 69 (249)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 3677777776 55688887766543
No 35
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=30.71 E-value=17 Score=31.79 Aligned_cols=15 Identities=47% Similarity=0.767 Sum_probs=12.4
Q ss_pred hHHHHHHHHhHHHHH
Q 019873 133 EDHFMCVQHEAGHFL 147 (334)
Q Consensus 133 eer~RIA~HEAGHaL 147 (334)
.+..-|+.||.||+|
T Consensus 120 ~~l~~v~~hE~Gh~l 134 (181)
T 3ma2_D 120 NDIFLVAVHELGHAL 134 (181)
T ss_dssp EEHHHHHHHHHHHHT
T ss_pred ceeeeeehhhccccc
Confidence 466789999999983
No 36
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=29.62 E-value=20 Score=34.29 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=12.4
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
+...|+.||.||+|=
T Consensus 106 ~~~~~~~HE~gH~lG 120 (365)
T 3ba0_A 106 NLFLTAVHEIGHSLG 120 (365)
T ss_dssp ESSHHHHHHHHHHHT
T ss_pred cceeehhhhhhhhhc
Confidence 346899999999984
No 37
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis}
Probab=29.55 E-value=32 Score=34.69 Aligned_cols=18 Identities=33% Similarity=0.372 Sum_probs=15.8
Q ss_pred HHHHHhHHHHHHHHHhCC
Q 019873 137 MCVQHEAGHFLTGYLLGV 154 (334)
Q Consensus 137 RIA~HEAGHaLVAyLLgi 154 (334)
.+..||.||++=.++...
T Consensus 355 ~TL~HE~GHalH~~ls~~ 372 (567)
T 3sks_A 355 DVLTHEAGHAFQVYESRK 372 (567)
T ss_dssp HHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHccHHHHHHHHcc
Confidence 579999999999999863
No 38
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=28.60 E-value=30 Score=34.84 Aligned_cols=24 Identities=29% Similarity=0.494 Sum_probs=19.9
Q ss_pred CCChhHHHHHHHHhHHHHHHHHHh
Q 019873 129 SLKEEDHFMCVQHEAGHFLTGYLL 152 (334)
Q Consensus 129 ~ls~eer~RIA~HEAGHaLVAyLL 152 (334)
.++++|-.-|..||.||.--.+.+
T Consensus 323 ~l~~~El~aVlaHElgH~~~~~~~ 346 (482)
T 4aw6_A 323 GCKNEEVLAVLGHELGHWKLGHTV 346 (482)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHHHHHHHcccHH
Confidence 379999999999999998665544
No 39
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A
Probab=28.05 E-value=36 Score=33.89 Aligned_cols=17 Identities=35% Similarity=0.427 Sum_probs=14.6
Q ss_pred HHHHHhHHHHHHHHHhC
Q 019873 137 MCVQHEAGHFLTGYLLG 153 (334)
Q Consensus 137 RIA~HEAGHaLVAyLLg 153 (334)
.++.||.||++=.++..
T Consensus 352 ~TL~HE~GHa~H~~ls~ 368 (564)
T 3ahn_A 352 DVLTHEAGHAFQVYESR 368 (564)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hhHHHHhCHHHHHHHhc
Confidence 57999999999888775
No 40
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=26.72 E-value=24 Score=31.23 Aligned_cols=19 Identities=32% Similarity=0.343 Sum_probs=14.8
Q ss_pred HHHHHHHhHHHHHHHHHhC
Q 019873 135 HFMCVQHEAGHFLTGYLLG 153 (334)
Q Consensus 135 r~RIA~HEAGHaLVAyLLg 153 (334)
+.-++.||.||+|=-+..-
T Consensus 87 ~~g~i~HEl~HalGf~HE~ 105 (201)
T 3edh_A 87 KFGIVVHELGHVVGFWHEH 105 (201)
T ss_dssp SHHHHHHHHHHHHTBCCGG
T ss_pred ccchhHHHHHHHhcchhhh
Confidence 4579999999998665554
No 41
>2vz4_A Tipal, HTH-type transcriptional activator TIPA; transcription, resistance, antibiotic; 2.90A {Streptomyces lividans}
Probab=26.28 E-value=60 Score=25.30 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=24.0
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHHHHHHHHHHHHHHHHcHHHHHH
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQVKWAALNTVLISHHHIQVRSR 284 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~evr~A~~~A~~LL~~hr~alea 284 (334)
.+|+..+..| ++.+|||.++|..-+...-....++|+++.+.++.
T Consensus 42 ~~dl~~l~~I~~lr~~G~sl~~I~~~l~~~~~~~~~~l~~~~~~l~~ 88 (108)
T 2vz4_A 42 DADLDRLQQILFYRELGFPLDEVAALLDDPAADPRAHLRRQHELLSA 88 (108)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHTC-----CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 4677777766 46689987766544321111234555555554443
No 42
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=26.18 E-value=69 Score=24.92 Aligned_cols=48 Identities=10% Similarity=0.291 Sum_probs=24.9
Q ss_pred hhHHHHHHHH--HHHhCCCcchhHHHHHHHHHHHHHHHHHcHHHHHHHHH
Q 019873 240 YSDINKLDKV--FQWLGYNKSEADSQVKWAALNTVLISHHHIQVRSRLAE 287 (334)
Q Consensus 240 ~~Dl~qat~l--~r~lGms~~~id~evr~A~~~A~~LL~~hr~aleaLAe 287 (334)
.+|+..+..+ ++.+|||.++|..-+...-....++|+++.+.++.=.+
T Consensus 43 ~~dl~~l~~I~~l~~~G~~l~~I~~~l~~~~~~~~~~l~~~~~~l~~~i~ 92 (109)
T 1r8d_A 43 DADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKKQ 92 (109)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 3566666665 45678887666444321111234455555555444333
No 43
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=25.45 E-value=21 Score=35.55 Aligned_cols=14 Identities=43% Similarity=0.712 Sum_probs=12.0
Q ss_pred HHHHHHHHhHHHHH
Q 019873 134 DHFMCVQHEAGHFL 147 (334)
Q Consensus 134 er~RIA~HEAGHaL 147 (334)
....||.||-||+|
T Consensus 375 ~l~~Va~HE~GHaL 388 (425)
T 1l6j_A 375 SLFLVAAHEFGHAL 388 (425)
T ss_dssp EHHHHHHHHHHHHT
T ss_pred cchhhhhhhhhhhc
Confidence 55689999999986
No 44
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=25.45 E-value=26 Score=31.11 Aligned_cols=36 Identities=19% Similarity=0.058 Sum_probs=22.1
Q ss_pred HHHHHHHhHHHHHHHHHhCC-CCC-ceecCchhhhccc
Q 019873 135 HFMCVQHEAGHFLTGYLLGV-LPK-GYEIPSVEALKQD 170 (334)
Q Consensus 135 r~RIA~HEAGHaLVAyLLgi-PV~-gyTI~p~eal~~G 170 (334)
...++.||.||+|=-+..-. |=+ .|--+-|+-+..|
T Consensus 93 ~~g~i~HEl~HaLGf~HEh~R~DRD~yV~I~~~nI~~~ 130 (199)
T 3lqb_A 93 YSGIAQHELNHALGFYHEQSRSDRDQYVRINWNNISPG 130 (199)
T ss_dssp SHHHHHHHHHHHHTCCCGGGSTTGGGTEEECGGGBCTT
T ss_pred ccchHHHHHHHHhccceeeeccCcCceEEeehhhcCcc
Confidence 35799999999986665542 211 3333456665554
No 45
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P
Probab=25.36 E-value=43 Score=34.53 Aligned_cols=18 Identities=22% Similarity=0.207 Sum_probs=15.6
Q ss_pred HHHHHhHHHHHHHHHhCC
Q 019873 137 MCVQHEAGHFLTGYLLGV 154 (334)
Q Consensus 137 RIA~HEAGHaLVAyLLgi 154 (334)
.+..||.||++=.++...
T Consensus 454 ~TLfHE~GHalH~~ls~~ 471 (674)
T 2o36_A 454 RTYFHEFGHVMHQLCSQA 471 (674)
T ss_dssp HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 579999999999888764
No 46
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=25.15 E-value=35 Score=30.74 Aligned_cols=22 Identities=18% Similarity=0.113 Sum_probs=19.2
Q ss_pred ChhHHHHHHHHhHHHHHHHHHh
Q 019873 131 KEEDHFMCVQHEAGHFLTGYLL 152 (334)
Q Consensus 131 s~eer~RIA~HEAGHaLVAyLL 152 (334)
+++|..-|+.||.||..-.+..
T Consensus 96 ~~~ELaaVLaHElgH~~~~H~~ 117 (253)
T 3c37_A 96 NETELAGVLAHEINHAVARHGT 117 (253)
T ss_dssp SHHHHHHHHHHHHHHHHTTHHH
T ss_pred CHHHHHHHHHHHHHHHHCcCHH
Confidence 7899999999999999776654
No 47
>2o71_A Death domain-containing protein cradd; raidd, apoptosis; 2.00A {Homo sapiens}
Probab=25.05 E-value=2.4e+02 Score=22.68 Aligned_cols=47 Identities=9% Similarity=-0.014 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCcchhHHHHH----HHHHHHHHHHHHcH------HHHHHHHHHHHh
Q 019873 245 KLDKVFQWLGYNKSEADSQVK----WAALNTVLISHHHI------QVRSRLAEAMAL 291 (334)
Q Consensus 245 qat~l~r~lGms~~~id~evr----~A~~~A~~LL~~hr------~aleaLAeaL~e 291 (334)
.-..++|.+|+++.+|+.-.. .-..++.++|+.-+ ..++.|.++|.+
T Consensus 37 ~Wk~LAR~LGlse~dId~I~~~~p~dl~eq~~qmL~~W~~r~G~~AT~~~L~~AL~~ 93 (115)
T 2o71_A 37 EWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGLRA 93 (115)
T ss_dssp THHHHHHHTTCCHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHH
T ss_pred hHHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 456678889999988876321 23466677776443 334555555555
No 48
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P
Probab=24.81 E-value=37 Score=34.99 Aligned_cols=17 Identities=24% Similarity=0.215 Sum_probs=14.9
Q ss_pred HHHHHhHHHHHHHHHhC
Q 019873 137 MCVQHEAGHFLTGYLLG 153 (334)
Q Consensus 137 RIA~HEAGHaLVAyLLg 153 (334)
.+..||.||++=.++..
T Consensus 470 ~TLfHE~GHalH~~ls~ 486 (678)
T 2o3e_A 470 ETYFHEFGHVMHQICAQ 486 (678)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 57999999999988776
No 49
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=24.04 E-value=1.1e+02 Score=25.29 Aligned_cols=20 Identities=30% Similarity=0.664 Sum_probs=10.6
Q ss_pred hHHHHHHHH--HHHhCCCcchh
Q 019873 241 SDINKLDKV--FQWLGYNKSEA 260 (334)
Q Consensus 241 ~Dl~qat~l--~r~lGms~~~i 260 (334)
+|+..+..| ++..|||.++|
T Consensus 46 ~dl~~l~~I~~lr~~G~sl~~I 67 (146)
T 3hh0_A 46 DDLYVLQQIQSFKHLGFSLGEI 67 (146)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHH
Confidence 455555554 34466665443
No 50
>1eak_A 72 kDa type IV collagenase; hydrolase-hydrolase inhibitor complex, hydrolyse, matrix metalloproteinase, gelatinase A, hydrolase- hydrolase inhib complex; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=23.24 E-value=25 Score=35.04 Aligned_cols=15 Identities=27% Similarity=0.572 Sum_probs=12.5
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
....||.||-||+|=
T Consensus 365 ~l~~va~HE~GHaLG 379 (421)
T 1eak_A 365 SLFLVAAHQFGHAMG 379 (421)
T ss_dssp EHHHHHHHHHHHHTT
T ss_pred cchhhhhhhhhhccC
Confidence 456899999999864
No 51
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=22.60 E-value=32 Score=34.95 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=11.4
Q ss_pred HHHHHhHHHHHHH
Q 019873 137 MCVQHEAGHFLTG 149 (334)
Q Consensus 137 RIA~HEAGHaLVA 149 (334)
.+++||.||++=-
T Consensus 343 ~tl~HE~GHa~y~ 355 (589)
T 1uze_A 343 VVAHHEMGHIQYF 355 (589)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5899999999984
No 52
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=22.59 E-value=32 Score=31.35 Aligned_cols=36 Identities=11% Similarity=0.096 Sum_probs=23.7
Q ss_pred HHHHHHHhHHHHHHHHHhCC-CCC-ceecCchhhhccc
Q 019873 135 HFMCVQHEAGHFLTGYLLGV-LPK-GYEIPSVEALKQD 170 (334)
Q Consensus 135 r~RIA~HEAGHaLVAyLLgi-PV~-gyTI~p~eal~~G 170 (334)
...++.||-||+|=-+..-. |=+ .|--+.|+-+..|
T Consensus 120 ~~g~i~HEl~HaLGf~HEhsR~DRD~yV~I~~~nI~~~ 157 (235)
T 3lq0_A 120 YHGTILHALMHAIGFYHEHTRMDRDNYVTINYQNVDPS 157 (235)
T ss_dssp SHHHHHHHHHHHHHBCCGGGSTTGGGTEEECGGGBCTT
T ss_pred ccchHHHHHHHHhccceeeecccccceeEeehhccCcc
Confidence 35899999999997776653 222 3444457666555
No 53
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=21.76 E-value=55 Score=30.92 Aligned_cols=22 Identities=23% Similarity=0.172 Sum_probs=18.2
Q ss_pred CChhHHHHHHHHhHHHHHHHHH
Q 019873 130 LKEEDHFMCVQHEAGHFLTGYL 151 (334)
Q Consensus 130 ls~eer~RIA~HEAGHaLVAyL 151 (334)
.++..++=++.||.||.+...-
T Consensus 91 ~~~~rqrFTLAHELGHllLh~~ 112 (301)
T 3dte_A 91 VRPERQRFTLAHEISHALLLGD 112 (301)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHC
T ss_pred CChhhHHHHHHHHHHHHHhccc
Confidence 3777778889999999998764
No 54
>3ezq_B Protein FADD; apoptosis, DISC, FAS, membrane,receptor, transmembrane; 2.73A {Homo sapiens} PDB: 1e3y_A 1e41_A 3oq9_H
Probab=21.67 E-value=3.3e+02 Score=22.15 Aligned_cols=47 Identities=11% Similarity=-0.036 Sum_probs=32.0
Q ss_pred HHHHHHHHhCCCcchhHHHHH----HHHHHHHHHHHHcH------HHHHHHHHHHHh
Q 019873 245 KLDKVFQWLGYNKSEADSQVK----WAALNTVLISHHHI------QVRSRLAEAMAL 291 (334)
Q Consensus 245 qat~l~r~lGms~~~id~evr----~A~~~A~~LL~~hr------~aleaLAeaL~e 291 (334)
.-.++++.+||++.+|+.-.. -...++.++|..-+ ..++.|.++|.+
T Consensus 19 ~Wk~LAR~LGlse~dId~Ie~~~p~dl~eq~~~mL~~W~~r~G~~ATv~~L~~AL~~ 75 (122)
T 3ezq_B 19 DWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRS 75 (122)
T ss_dssp THHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHH
T ss_pred hHHHHHHHhCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHhhCCCchHHHHHHHHHH
Confidence 345567889999888775321 24567778886433 457888888875
No 55
>2gf5_A FADD protein; death domain, death effector domain, apoptosis, death- inducing signaling complex; NMR {Homo sapiens} SCOP: a.77.1.2 a.77.1.4
Probab=20.89 E-value=1.4e+02 Score=25.69 Aligned_cols=66 Identities=11% Similarity=-0.026 Sum_probs=40.3
Q ss_pred HHHHHHHHhCCCcchhHHHHH----HHHHHHHHHHHHcH------HHHHHHHHHHHhhCcHHHHHHHHhchhhhhhh
Q 019873 245 KLDKVFQWLGYNKSEADSQVK----WAALNTVLISHHHI------QVRSRLAEAMALGRSIGSYTSKILTEQSLELL 311 (334)
Q Consensus 245 qat~l~r~lGms~~~id~evr----~A~~~A~~LL~~hr------~aleaLAeaL~e~esl~eci~~Ie~~~~~~~l 311 (334)
....+++.+||++.+|+.-.. .-..++.++|+..+ ..++.|.+||..-. ..+..+.|+.......+
T Consensus 111 ~Wk~Lar~Lgl~~~~I~~I~~~~~~d~~eq~~~mL~~W~~r~g~~At~~~L~~AL~~~~-~~diae~l~~~~~~~~~ 186 (191)
T 2gf5_A 111 DWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQ-MNLVADLVQEVQQARDL 186 (191)
T ss_dssp THHHHHHHTTCCHHHHHHHHHHSSSCSHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHT-CHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHcCCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHcC-cHHHHHHHHHHHHHhhh
Confidence 355578889999988765321 23466777776554 34788888888754 34444444444443333
No 56
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A
Probab=20.75 E-value=44 Score=34.29 Aligned_cols=15 Identities=40% Similarity=0.713 Sum_probs=12.4
Q ss_pred HHHHHHHHhHHHHHH
Q 019873 134 DHFMCVQHEAGHFLT 148 (334)
Q Consensus 134 er~RIA~HEAGHaLV 148 (334)
+.-.+++||+||++=
T Consensus 344 ~d~~~~~HE~GHa~Y 358 (598)
T 2x96_A 344 DQLFTVHHELGHIQY 358 (598)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhHhHHHHHHHHHHH
Confidence 345679999999997
No 57
>2yqf_A Ankyrin-1; death domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yvi_A
Probab=20.30 E-value=1.1e+02 Score=24.21 Aligned_cols=33 Identities=6% Similarity=-0.020 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCcchhHHHHH----HHHHHHHHHHHHc
Q 019873 246 LDKVFQWLGYNKSEADSQVK----WAALNTVLISHHH 278 (334)
Q Consensus 246 at~l~r~lGms~~~id~evr----~A~~~A~~LL~~h 278 (334)
-.++++.+||+..+|+.-.. --..++.++|+.-
T Consensus 32 Wk~LAr~Lg~s~~~I~~I~~~~p~~~~eq~~~mL~~W 68 (111)
T 2yqf_A 32 WAELARELQFSVEDINRIRVENPNSLLEQSVALLNLW 68 (111)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHSCSCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 55678889999988765322 2456777777654
Done!