Query 019876
Match_columns 334
No_of_seqs 340 out of 3033
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:25:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1cjc_A Protein (adrenodoxin re 100.0 1.4E-38 4.7E-43 308.6 28.1 306 18-329 5-316 (460)
2 1lqt_A FPRA; NADP+ derivative, 100.0 9.5E-39 3.3E-43 309.4 25.7 302 19-330 3-310 (456)
3 2vdc_G Glutamate synthase [NAD 100.0 6.4E-31 2.2E-35 254.3 15.2 237 17-331 120-363 (456)
4 1gte_A Dihydropyrimidine dehyd 99.9 5.5E-25 1.9E-29 231.7 16.4 226 18-322 186-419 (1025)
5 3oc4_A Oxidoreductase, pyridin 99.9 3.1E-23 1.1E-27 200.4 16.4 215 20-314 3-231 (452)
6 4gcm_A TRXR, thioredoxin reduc 99.9 2.2E-22 7.5E-27 184.6 19.6 180 18-237 5-200 (312)
7 4a5l_A Thioredoxin reductase; 99.9 1.3E-22 4.5E-27 185.8 17.8 165 19-215 4-187 (314)
8 3lxd_A FAD-dependent pyridine 99.9 1.9E-23 6.4E-28 199.7 12.2 217 18-312 8-235 (415)
9 3ef6_A Toluene 1,2-dioxygenase 99.9 1.3E-23 4.6E-28 200.6 10.2 213 20-312 3-225 (410)
10 3fg2_P Putative rubredoxin red 99.9 5.5E-23 1.9E-27 195.8 12.0 216 19-312 1-225 (404)
11 3r9u_A Thioredoxin reductase; 99.9 9.5E-22 3.3E-26 179.7 19.2 199 18-310 3-222 (315)
12 3kd9_A Coenzyme A disulfide re 99.9 2.6E-22 9.1E-27 193.7 15.6 170 19-218 3-186 (449)
13 3itj_A Thioredoxin reductase 1 99.9 1.1E-21 3.6E-26 181.2 18.9 205 17-311 20-249 (338)
14 2bc0_A NADH oxidase; flavoprot 99.9 3.9E-22 1.3E-26 194.7 16.2 183 4-217 17-231 (490)
15 3klj_A NAD(FAD)-dependent dehy 99.9 3.7E-23 1.3E-27 195.9 8.4 191 18-241 8-211 (385)
16 1mo9_A ORF3; nucleotide bindin 99.9 7.3E-22 2.5E-26 194.2 17.6 168 17-219 41-253 (523)
17 2qae_A Lipoamide, dihydrolipoy 99.9 6.9E-22 2.4E-26 191.7 16.4 165 19-220 2-214 (468)
18 1zk7_A HGII, reductase, mercur 99.9 8.7E-22 3E-26 191.0 16.9 162 18-217 3-213 (467)
19 1nhp_A NADH peroxidase; oxidor 99.9 4E-22 1.4E-26 192.3 14.4 211 20-310 1-229 (447)
20 3f8d_A Thioredoxin reductase ( 99.9 5.2E-21 1.8E-25 175.2 21.1 198 19-311 15-229 (323)
21 1zmd_A Dihydrolipoyl dehydroge 99.9 7.2E-22 2.5E-26 191.9 16.1 162 19-217 6-215 (474)
22 2q7v_A Thioredoxin reductase; 99.9 1E-20 3.5E-25 174.3 22.1 199 19-311 8-227 (325)
23 1vdc_A NTR, NADPH dependent th 99.9 9E-21 3.1E-25 175.1 19.6 166 19-215 8-194 (333)
24 1trb_A Thioredoxin reductase; 99.9 8.2E-21 2.8E-25 174.3 19.1 203 19-311 5-224 (320)
25 1q1r_A Putidaredoxin reductase 99.9 1.2E-21 4.2E-26 188.1 14.1 216 19-311 4-233 (431)
26 1fl2_A Alkyl hydroperoxide red 99.9 2.3E-20 8E-25 170.6 21.7 198 20-311 2-220 (310)
27 2wpf_A Trypanothione reductase 99.9 1.2E-21 4.2E-26 191.4 13.8 163 19-220 7-234 (495)
28 1dxl_A Dihydrolipoamide dehydr 99.9 1.8E-21 6.1E-26 188.9 14.8 165 18-219 5-216 (470)
29 2a87_A TRXR, TR, thioredoxin r 99.9 1.4E-20 4.7E-25 174.5 20.0 161 17-215 12-190 (335)
30 2cdu_A NADPH oxidase; flavoenz 99.9 3.2E-21 1.1E-25 186.2 16.3 168 20-217 1-186 (452)
31 2v3a_A Rubredoxin reductase; a 99.9 2.4E-21 8.3E-26 183.2 15.1 170 19-219 4-184 (384)
32 2q0l_A TRXR, thioredoxin reduc 99.9 1.8E-20 6.1E-25 171.4 20.3 158 20-215 2-178 (311)
33 1onf_A GR, grase, glutathione 99.9 2.1E-21 7.2E-26 190.0 14.8 161 19-220 2-216 (500)
34 3lzw_A Ferredoxin--NADP reduct 99.9 6.6E-21 2.3E-25 175.4 17.1 160 19-215 7-189 (332)
35 1fec_A Trypanothione reductase 99.9 4E-21 1.4E-25 187.5 16.4 163 19-220 3-230 (490)
36 3iwa_A FAD-dependent pyridine 99.9 3.8E-21 1.3E-25 186.7 15.8 212 19-311 3-241 (472)
37 2yqu_A 2-oxoglutarate dehydrog 99.9 3.3E-21 1.1E-25 186.3 15.0 162 20-218 2-205 (455)
38 2zbw_A Thioredoxin reductase; 99.9 9.2E-21 3.2E-25 175.2 17.4 202 19-310 5-229 (335)
39 1ges_A Glutathione reductase; 99.9 2.6E-21 8.9E-26 186.9 14.3 162 19-220 4-207 (450)
40 1ebd_A E3BD, dihydrolipoamide 99.9 8.6E-21 2.9E-25 183.4 17.7 162 19-219 3-209 (455)
41 3cgb_A Pyridine nucleotide-dis 99.9 3.6E-21 1.2E-25 187.4 14.7 172 19-219 36-225 (480)
42 2r9z_A Glutathione amide reduc 99.9 4.2E-21 1.4E-25 186.1 15.0 162 19-220 4-206 (463)
43 3dk9_A Grase, GR, glutathione 99.8 7.9E-21 2.7E-25 184.8 15.7 162 19-220 20-227 (478)
44 2hqm_A GR, grase, glutathione 99.8 6.2E-21 2.1E-25 185.6 15.0 163 18-220 10-225 (479)
45 1ps9_A 2,4-dienoyl-COA reducta 99.8 2E-20 7E-25 189.2 18.5 201 18-241 372-596 (671)
46 3ntd_A FAD-dependent pyridine 99.8 6.9E-21 2.4E-25 188.8 14.7 193 19-241 1-215 (565)
47 2gag_A Heterotetrameric sarcos 99.8 1.1E-20 3.6E-25 197.9 16.8 202 19-311 128-357 (965)
48 3cty_A Thioredoxin reductase; 99.8 6.7E-20 2.3E-24 168.5 19.9 159 19-215 16-190 (319)
49 4dna_A Probable glutathione re 99.8 8.5E-21 2.9E-25 183.9 14.6 162 19-220 5-210 (463)
50 2eq6_A Pyruvate dehydrogenase 99.8 1.5E-20 5.3E-25 182.1 15.6 162 19-219 6-208 (464)
51 1xhc_A NADH oxidase /nitrite r 99.8 1.5E-21 5.1E-26 183.7 8.2 187 19-241 8-206 (367)
52 2gqw_A Ferredoxin reductase; f 99.8 2.1E-20 7.3E-25 178.3 16.2 165 18-218 6-183 (408)
53 4eqs_A Coenzyme A disulfide re 99.8 5.7E-21 2E-25 183.8 12.3 187 20-241 1-211 (437)
54 3lad_A Dihydrolipoamide dehydr 99.8 2.9E-20 9.8E-25 180.7 17.3 166 18-220 2-220 (476)
55 2a8x_A Dihydrolipoyl dehydroge 99.8 1.6E-20 5.4E-25 182.0 15.5 163 19-220 3-211 (464)
56 1xdi_A RV3303C-LPDA; reductase 99.8 1.1E-20 3.9E-25 184.6 14.5 165 20-220 3-222 (499)
57 3l8k_A Dihydrolipoyl dehydroge 99.8 1.2E-20 4.1E-25 183.0 13.7 184 19-240 4-233 (466)
58 3urh_A Dihydrolipoyl dehydroge 99.8 3.1E-20 1.1E-24 181.2 16.7 164 18-220 24-238 (491)
59 1ojt_A Surface protein; redox- 99.8 2.7E-20 9.1E-25 181.3 16.0 203 19-311 6-265 (482)
60 1o94_A Tmadh, trimethylamine d 99.8 2.8E-20 9.5E-25 189.7 16.7 185 17-241 387-594 (729)
61 3ab1_A Ferredoxin--NADP reduct 99.8 6.8E-20 2.3E-24 171.3 18.1 203 19-310 14-241 (360)
62 1v59_A Dihydrolipoamide dehydr 99.8 3.7E-20 1.3E-24 180.0 16.8 163 19-220 5-223 (478)
63 4b1b_A TRXR, thioredoxin reduc 99.8 9E-21 3.1E-25 186.5 11.8 164 20-221 43-263 (542)
64 3k30_A Histamine dehydrogenase 99.8 4.4E-20 1.5E-24 187.2 16.8 186 17-241 389-590 (690)
65 4fk1_A Putative thioredoxin re 99.8 6.2E-20 2.1E-24 167.9 16.2 160 17-215 4-182 (304)
66 3ics_A Coenzyme A-disulfide re 99.8 4.8E-20 1.6E-24 183.7 16.3 197 17-241 34-251 (588)
67 1hyu_A AHPF, alkyl hydroperoxi 99.8 1.9E-19 6.5E-24 176.9 20.0 200 18-311 211-431 (521)
68 3o0h_A Glutathione reductase; 99.8 3.7E-20 1.3E-24 180.3 14.7 162 19-220 26-231 (484)
69 1lvl_A Dihydrolipoamide dehydr 99.8 5.3E-20 1.8E-24 178.1 15.3 182 19-240 5-234 (458)
70 3dgz_A Thioredoxin reductase 2 99.8 3.7E-20 1.3E-24 180.5 14.0 163 18-219 5-223 (488)
71 3d1c_A Flavin-containing putat 99.8 2.3E-19 8E-24 167.8 18.7 157 19-216 4-202 (369)
72 3qfa_A Thioredoxin reductase 1 99.8 1E-19 3.4E-24 178.8 16.4 182 19-239 32-271 (519)
73 3ic9_A Dihydrolipoamide dehydr 99.8 3.5E-20 1.2E-24 181.0 12.8 164 19-220 8-214 (492)
74 2xve_A Flavin-containing monoo 99.8 1.4E-19 4.9E-24 175.3 16.6 162 20-216 3-233 (464)
75 3fbs_A Oxidoreductase; structu 99.8 4E-19 1.4E-23 160.9 18.1 175 20-237 3-193 (297)
76 3dgh_A TRXR-1, thioredoxin red 99.8 3.7E-19 1.3E-23 173.2 17.2 163 18-219 8-225 (483)
77 2gv8_A Monooxygenase; FMO, FAD 99.8 3.3E-19 1.1E-23 171.8 16.6 164 18-215 5-248 (447)
78 3gwf_A Cyclohexanone monooxyge 99.8 2.3E-19 7.8E-24 176.9 15.1 163 18-215 7-213 (540)
79 3s5w_A L-ornithine 5-monooxyge 99.8 4.7E-19 1.6E-23 171.3 16.8 173 19-217 30-266 (463)
80 4ap3_A Steroid monooxygenase; 99.8 2.4E-19 8.1E-24 177.1 13.1 167 18-219 20-230 (549)
81 3uox_A Otemo; baeyer-villiger 99.8 6.3E-19 2.1E-23 174.0 15.4 169 18-215 8-220 (545)
82 4g6h_A Rotenone-insensitive NA 99.8 5.7E-20 2E-24 179.7 6.7 216 16-241 39-295 (502)
83 4a9w_A Monooxygenase; baeyer-v 99.8 1.6E-18 5.4E-23 160.7 15.8 163 19-217 3-200 (357)
84 2x8g_A Thioredoxin glutathione 99.8 8.1E-19 2.8E-23 175.2 14.5 184 17-239 105-347 (598)
85 1m6i_A Programmed cell death p 99.7 8.2E-19 2.8E-23 171.3 6.5 172 18-216 10-220 (493)
86 1w4x_A Phenylacetone monooxyge 99.7 7.4E-17 2.5E-21 159.2 16.2 163 18-215 15-221 (542)
87 3sx6_A Sulfide-quinone reducta 99.7 3.2E-18 1.1E-22 164.5 6.2 199 19-241 4-231 (437)
88 1y56_A Hypothetical protein PH 99.7 2.8E-16 9.7E-21 153.3 14.3 141 20-173 109-264 (493)
89 3h8l_A NADH oxidase; membrane 99.7 6.8E-17 2.3E-21 153.8 9.1 195 20-241 2-241 (409)
90 3vrd_B FCCB subunit, flavocyto 99.7 6.8E-18 2.3E-22 160.1 0.6 109 19-129 2-117 (401)
91 3hyw_A Sulfide-quinone reducta 99.7 9.8E-18 3.4E-22 160.9 0.2 203 20-241 3-223 (430)
92 3h28_A Sulfide-quinone reducta 99.6 1E-16 3.5E-21 153.6 3.8 199 19-241 2-223 (430)
93 4b63_A L-ornithine N5 monooxyg 99.6 4.5E-14 1.5E-18 137.9 16.9 171 18-215 38-283 (501)
94 3fpz_A Thiazole biosynthetic e 99.3 8.5E-14 2.9E-18 128.4 -3.2 139 19-180 65-204 (326)
95 2gqf_A Hypothetical protein HI 99.1 2.3E-10 8E-15 108.5 10.8 98 19-118 4-167 (401)
96 3v76_A Flavoprotein; structura 99.0 8.3E-10 2.8E-14 105.2 9.2 109 9-119 17-187 (417)
97 2ywl_A Thioredoxin reductase r 99.0 2.1E-09 7.3E-14 89.9 10.7 97 20-120 2-110 (180)
98 2bry_A NEDD9 interacting prote 98.8 2.2E-08 7.6E-13 97.5 11.1 100 17-118 90-229 (497)
99 2cul_A Glucose-inhibited divis 98.8 7.5E-08 2.6E-12 84.1 12.4 98 19-118 3-124 (232)
100 2e5v_A L-aspartate oxidase; ar 98.8 5.5E-09 1.9E-13 101.1 5.4 31 21-53 1-31 (472)
101 1rp0_A ARA6, thiazole biosynth 98.7 8.2E-08 2.8E-12 86.5 12.3 38 19-58 39-77 (284)
102 3ces_A MNMG, tRNA uridine 5-ca 98.7 3.5E-08 1.2E-12 98.2 10.6 130 18-180 27-211 (651)
103 3alj_A 2-methyl-3-hydroxypyrid 98.7 8E-08 2.7E-12 89.9 10.3 100 18-119 10-160 (379)
104 2i0z_A NAD(FAD)-utilizing dehy 98.6 9.8E-08 3.3E-12 91.6 9.4 38 18-57 25-62 (447)
105 3kkj_A Amine oxidase, flavin-c 98.6 4.7E-08 1.6E-12 85.0 5.6 40 20-61 3-42 (336)
106 1y0p_A Fumarate reductase flav 98.5 2.8E-07 9.7E-12 91.1 11.0 39 18-58 125-163 (571)
107 3nlc_A Uncharacterized protein 98.5 2.6E-07 9.1E-12 90.7 10.4 35 19-55 107-141 (549)
108 3jsk_A Cypbp37 protein; octame 98.5 9.4E-07 3.2E-11 81.5 12.4 40 19-58 79-118 (344)
109 3nix_A Flavoprotein/dehydrogen 98.5 3.2E-07 1.1E-11 86.7 9.6 34 19-54 5-38 (421)
110 3oz2_A Digeranylgeranylglycero 98.5 3.8E-07 1.3E-11 84.9 9.0 36 19-56 4-39 (397)
111 1ryi_A Glycine oxidase; flavop 98.5 4.3E-07 1.5E-11 84.6 9.3 37 18-56 16-52 (382)
112 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 5E-07 1.7E-11 83.2 9.5 39 20-60 2-43 (342)
113 1yvv_A Amine oxidase, flavin-c 98.4 7.8E-07 2.7E-11 81.3 10.5 40 19-60 2-41 (336)
114 1nhp_A NADH peroxidase; oxidor 98.4 1E-06 3.4E-11 84.4 10.8 94 18-123 148-249 (447)
115 1xhc_A NADH oxidase /nitrite r 98.4 8.8E-07 3E-11 82.7 9.7 90 19-122 143-236 (367)
116 2x3n_A Probable FAD-dependent 98.4 9.7E-07 3.3E-11 82.9 10.1 99 19-119 6-166 (399)
117 3ihg_A RDME; flavoenzyme, anth 98.4 1.7E-06 5.7E-11 84.8 11.9 36 18-55 4-39 (535)
118 3dme_A Conserved exported prot 98.4 1E-06 3.4E-11 81.3 9.7 35 19-55 4-38 (369)
119 3cgv_A Geranylgeranyl reductas 98.4 1.3E-06 4.4E-11 81.7 10.4 37 19-57 4-40 (397)
120 3rp8_A Flavoprotein monooxygen 98.4 1.3E-06 4.5E-11 82.3 10.1 38 17-56 21-58 (407)
121 1qo8_A Flavocytochrome C3 fuma 98.4 1.2E-06 4.2E-11 86.4 10.2 39 18-58 120-158 (566)
122 3e1t_A Halogenase; flavoprotei 98.4 1.3E-06 4.4E-11 85.2 10.0 34 19-54 7-40 (512)
123 2uzz_A N-methyl-L-tryptophan o 98.3 1E-06 3.6E-11 81.7 8.8 36 19-56 2-37 (372)
124 3ps9_A TRNA 5-methylaminomethy 98.3 2.3E-06 7.7E-11 86.3 11.7 37 18-56 271-307 (676)
125 2gjc_A Thiazole biosynthetic e 98.3 3.1E-06 1E-10 77.6 11.5 39 20-58 66-104 (326)
126 3i3l_A Alkylhalidase CMLS; fla 98.3 1.7E-06 5.8E-11 85.8 10.4 36 18-55 22-57 (591)
127 3c4a_A Probable tryptophan hyd 98.3 9.8E-07 3.3E-11 82.6 8.2 99 20-120 1-144 (381)
128 2zxi_A TRNA uridine 5-carboxym 98.3 1.5E-06 5E-11 86.2 9.6 108 18-128 26-188 (637)
129 1lvl_A Dihydrolipoamide dehydr 98.3 2.3E-06 7.9E-11 82.2 10.7 93 18-123 170-271 (458)
130 2vou_A 2,6-dihydroxypyridine h 98.3 2.2E-06 7.6E-11 80.6 10.3 36 18-55 4-39 (397)
131 3fmw_A Oxygenase; mithramycin, 98.3 1.8E-06 6.3E-11 85.3 10.1 99 19-119 49-207 (570)
132 4b1b_A TRXR, thioredoxin reduc 98.3 1.8E-06 6.3E-11 84.7 9.9 95 14-122 218-321 (542)
133 2gqw_A Ferredoxin reductase; f 98.3 2.8E-06 9.5E-11 80.4 10.8 93 18-122 144-241 (408)
134 1y56_B Sarcosine oxidase; dehy 98.3 2.7E-06 9.4E-11 79.2 10.6 35 19-55 5-39 (382)
135 2eq6_A Pyruvate dehydrogenase 98.3 3E-06 1E-10 81.5 11.1 93 18-123 168-274 (464)
136 2yqu_A 2-oxoglutarate dehydrog 98.3 2.2E-06 7.4E-11 82.2 10.1 93 18-123 166-267 (455)
137 2v3a_A Rubredoxin reductase; a 98.3 3.3E-06 1.1E-10 79.1 10.9 92 19-122 145-245 (384)
138 2qa1_A PGAE, polyketide oxygen 98.3 3.7E-06 1.3E-10 81.8 11.5 102 16-119 8-165 (500)
139 1k0i_A P-hydroxybenzoate hydro 98.3 2E-06 6.8E-11 80.6 9.1 34 20-55 3-36 (394)
140 3pvc_A TRNA 5-methylaminomethy 98.3 3.7E-06 1.3E-10 85.0 11.6 37 18-56 263-299 (689)
141 2bc0_A NADH oxidase; flavoprot 98.3 3.7E-06 1.3E-10 81.5 11.2 94 17-122 192-293 (490)
142 2xdo_A TETX2 protein; tetracyc 98.3 4.6E-06 1.6E-10 78.4 11.3 36 18-55 25-60 (398)
143 3nyc_A D-arginine dehydrogenas 98.3 2.2E-06 7.7E-11 79.5 9.0 37 18-57 8-44 (381)
144 4dgk_A Phytoene dehydrogenase; 98.3 5.4E-07 1.9E-11 87.2 4.8 41 19-61 1-41 (501)
145 3klj_A NAD(FAD)-dependent dehy 98.2 1.3E-06 4.3E-11 82.2 6.9 88 19-122 146-233 (385)
146 2r9z_A Glutathione amide reduc 98.2 3.6E-06 1.2E-10 81.0 10.0 92 18-122 165-266 (463)
147 4eqs_A Coenzyme A disulfide re 98.2 2.6E-06 8.9E-11 81.4 8.7 91 19-122 147-242 (437)
148 3oc4_A Oxidoreductase, pyridin 98.2 8.7E-06 3E-10 78.0 12.4 94 18-123 146-247 (452)
149 1zk7_A HGII, reductase, mercur 98.2 4E-06 1.4E-10 80.7 10.0 91 18-122 175-273 (467)
150 3c4n_A Uncharacterized protein 98.2 2.6E-06 9E-11 80.4 8.5 37 19-55 36-72 (405)
151 2qa2_A CABE, polyketide oxygen 98.2 5.3E-06 1.8E-10 80.6 10.9 100 18-119 11-166 (499)
152 1d4d_A Flavocytochrome C fumar 98.2 6.5E-06 2.2E-10 81.4 11.4 39 19-59 126-164 (572)
153 2gag_B Heterotetrameric sarcos 98.2 4.4E-06 1.5E-10 78.3 9.6 39 17-56 19-58 (405)
154 2gf3_A MSOX, monomeric sarcosi 98.2 4.2E-06 1.4E-10 78.0 9.4 37 19-57 3-39 (389)
155 3atr_A Conserved archaeal prot 98.2 2.9E-06 9.8E-11 81.3 8.4 99 19-119 6-162 (453)
156 3cp8_A TRNA uridine 5-carboxym 98.2 3.4E-06 1.2E-10 83.8 9.2 35 18-54 20-54 (641)
157 1ebd_A E3BD, dihydrolipoamide 98.2 6.4E-06 2.2E-10 78.9 10.8 92 18-122 169-272 (455)
158 2gmh_A Electron transfer flavo 98.2 7.8E-06 2.7E-10 81.0 11.5 38 20-57 36-77 (584)
159 3lxd_A FAD-dependent pyridine 98.2 8.3E-06 2.8E-10 77.2 10.9 92 19-122 152-253 (415)
160 4gde_A UDP-galactopyranose mut 98.2 9.7E-07 3.3E-11 85.5 4.4 43 18-61 9-51 (513)
161 3ef6_A Toluene 1,2-dioxygenase 98.2 3.9E-06 1.3E-10 79.4 8.5 93 18-122 142-243 (410)
162 3cgb_A Pyridine nucleotide-dis 98.2 5.4E-06 1.8E-10 80.1 9.6 92 18-122 185-284 (480)
163 1v59_A Dihydrolipoamide dehydr 98.2 7.7E-06 2.6E-10 78.9 10.6 92 18-122 182-289 (478)
164 3c96_A Flavin-containing monoo 98.2 7.4E-06 2.5E-10 77.3 10.3 36 19-56 4-40 (410)
165 2hqm_A GR, grase, glutathione 98.2 6.8E-06 2.3E-10 79.4 10.0 92 18-122 184-287 (479)
166 1ojt_A Surface protein; redox- 98.1 5.9E-06 2E-10 79.8 9.5 92 18-122 184-288 (482)
167 3fg2_P Putative rubredoxin red 98.1 9E-06 3.1E-10 76.6 10.5 93 18-122 141-243 (404)
168 1onf_A GR, grase, glutathione 98.1 1.1E-05 3.7E-10 78.4 11.2 91 19-122 176-277 (500)
169 1ges_A Glutathione reductase; 98.1 7.6E-06 2.6E-10 78.4 9.7 92 18-122 166-267 (450)
170 2a8x_A Dihydrolipoyl dehydroge 98.1 1E-05 3.5E-10 77.7 10.5 92 18-122 170-273 (464)
171 2cdu_A NADPH oxidase; flavoenz 98.1 1.1E-05 3.6E-10 77.3 10.4 93 18-122 148-249 (452)
172 1zmd_A Dihydrolipoyl dehydroge 98.1 1.4E-05 4.9E-10 76.9 11.2 92 18-122 177-284 (474)
173 1mo9_A ORF3; nucleotide bindin 98.1 1.4E-05 4.7E-10 78.1 11.2 90 20-122 215-318 (523)
174 3urh_A Dihydrolipoyl dehydroge 98.1 1.8E-05 6E-10 76.6 11.4 93 17-122 196-302 (491)
175 2qae_A Lipoamide, dihydrolipoy 98.1 1.5E-05 5.3E-10 76.5 10.9 92 18-122 173-278 (468)
176 3dk9_A Grase, GR, glutathione 98.1 1.9E-05 6.6E-10 76.0 11.6 92 18-122 186-295 (478)
177 2wpf_A Trypanothione reductase 98.1 1.3E-05 4.4E-10 77.8 10.4 94 18-122 190-294 (495)
178 1fec_A Trypanothione reductase 98.1 1.2E-05 4.1E-10 77.9 10.2 92 18-122 186-290 (490)
179 3ic9_A Dihydrolipoamide dehydr 98.1 2.2E-05 7.5E-10 76.1 11.6 93 17-123 172-277 (492)
180 3lad_A Dihydrolipoamide dehydr 98.1 2.4E-05 8.3E-10 75.3 11.8 93 17-122 178-282 (476)
181 1q1r_A Putidaredoxin reductase 98.1 1.6E-05 5.5E-10 75.7 10.3 93 18-122 148-252 (431)
182 1xdi_A RV3303C-LPDA; reductase 98.0 2.1E-05 7E-10 76.4 11.0 92 18-122 181-281 (499)
183 4dna_A Probable glutathione re 98.0 2E-05 6.7E-10 75.7 10.6 93 17-122 168-270 (463)
184 1trb_A Thioredoxin reductase; 98.0 2.5E-05 8.4E-10 70.7 10.7 90 18-122 144-249 (320)
185 1dxl_A Dihydrolipoamide dehydr 98.0 1.2E-05 4E-10 77.4 9.0 92 18-122 176-281 (470)
186 3nrn_A Uncharacterized protein 98.0 4.3E-06 1.5E-10 79.1 5.8 40 20-61 1-40 (421)
187 3ics_A Coenzyme A-disulfide re 98.0 1.8E-05 6.3E-10 78.3 10.2 92 18-122 186-284 (588)
188 2e1m_A L-glutamate oxidase; L- 98.0 6.7E-06 2.3E-10 76.9 6.7 43 17-61 42-85 (376)
189 3ka7_A Oxidoreductase; structu 98.0 5E-06 1.7E-10 78.5 5.8 39 20-60 1-39 (425)
190 3i6d_A Protoporphyrinogen oxid 98.0 3.2E-06 1.1E-10 80.8 4.2 42 19-60 5-50 (470)
191 3kd9_A Coenzyme A disulfide re 98.0 3E-05 1E-09 74.1 11.0 92 18-122 147-246 (449)
192 3o0h_A Glutathione reductase; 98.0 2.9E-05 1E-09 74.9 10.8 93 17-122 189-290 (484)
193 3k7m_X 6-hydroxy-L-nicotine ox 98.0 5.1E-06 1.7E-10 78.7 5.3 47 20-68 2-51 (431)
194 3iwa_A FAD-dependent pyridine 98.0 2.9E-05 9.9E-10 74.7 10.6 93 18-122 158-260 (472)
195 3nks_A Protoporphyrinogen oxid 98.0 6.7E-06 2.3E-10 78.9 5.9 43 19-61 2-44 (477)
196 2jae_A L-amino acid oxidase; o 98.0 8.9E-06 3.1E-10 78.5 6.7 43 16-60 8-50 (489)
197 4hb9_A Similarities with proba 97.9 7.4E-06 2.5E-10 76.6 5.6 36 19-56 1-36 (412)
198 3dgh_A TRXR-1, thioredoxin red 97.9 4.1E-05 1.4E-09 73.9 10.8 92 17-122 185-291 (483)
199 3ntd_A FAD-dependent pyridine 97.9 3.3E-05 1.1E-09 75.9 10.4 92 18-122 150-269 (565)
200 1kf6_A Fumarate reductase flav 97.9 4.8E-05 1.6E-09 75.6 11.5 37 19-55 5-41 (602)
201 1s3e_A Amine oxidase [flavin-c 97.9 7.5E-06 2.6E-10 79.8 5.4 41 19-61 4-44 (520)
202 1m6i_A Programmed cell death p 97.9 3.7E-05 1.3E-09 74.5 10.3 94 19-122 180-284 (493)
203 1pj5_A N,N-dimethylglycine oxi 97.9 4.4E-05 1.5E-09 78.7 11.2 35 19-55 4-39 (830)
204 3dgz_A Thioredoxin reductase 2 97.9 4.9E-05 1.7E-09 73.4 10.9 92 17-122 183-289 (488)
205 3qfa_A Thioredoxin reductase 1 97.9 5.4E-05 1.8E-09 73.8 11.2 92 17-122 208-317 (519)
206 3lov_A Protoporphyrinogen oxid 97.9 1.1E-05 3.8E-10 77.4 6.2 42 19-60 4-45 (475)
207 2b9w_A Putative aminooxidase; 97.9 1.1E-05 3.8E-10 76.2 5.9 43 18-61 5-47 (424)
208 2zbw_A Thioredoxin reductase; 97.9 5.9E-05 2E-09 68.6 10.6 90 18-122 151-254 (335)
209 2bcg_G Secretory pathway GDP d 97.9 9.9E-06 3.4E-10 77.7 5.5 42 18-61 10-51 (453)
210 1rsg_A FMS1 protein; FAD bindi 97.9 7.4E-06 2.5E-10 79.8 4.5 42 18-60 7-48 (516)
211 3d1c_A Flavin-containing putat 97.9 5.1E-05 1.8E-09 70.0 9.9 99 18-122 165-274 (369)
212 2yg5_A Putrescine oxidase; oxi 97.9 7.1E-06 2.4E-10 78.3 4.1 41 19-61 5-45 (453)
213 4g6h_A Rotenone-insensitive NA 97.9 3.6E-05 1.2E-09 74.8 8.9 91 20-121 218-333 (502)
214 1v0j_A UDP-galactopyranose mut 97.9 1.3E-05 4.5E-10 75.5 5.5 41 19-61 7-48 (399)
215 2ivd_A PPO, PPOX, protoporphyr 97.9 1.2E-05 4.3E-10 77.1 5.5 42 18-61 15-56 (478)
216 3hdq_A UDP-galactopyranose mut 97.8 1.6E-05 5.5E-10 74.9 5.8 42 18-61 28-69 (397)
217 3s5w_A L-ornithine 5-monooxyge 97.8 4.6E-05 1.6E-09 72.9 8.8 38 18-55 226-263 (463)
218 2vvm_A Monoamine oxidase N; FA 97.8 1.5E-05 5E-10 77.1 5.2 40 20-61 40-79 (495)
219 3itj_A Thioredoxin reductase 1 97.8 8E-05 2.7E-09 67.5 9.7 87 18-122 172-273 (338)
220 1sez_A Protoporphyrinogen oxid 97.8 2.1E-05 7.2E-10 76.1 5.9 41 18-60 12-52 (504)
221 2bi7_A UDP-galactopyranose mut 97.8 2.4E-05 8.1E-10 73.4 6.0 41 19-61 3-43 (384)
222 2iid_A L-amino-acid oxidase; f 97.8 2.8E-05 9.5E-10 75.2 6.3 41 18-60 32-72 (498)
223 1i8t_A UDP-galactopyranose mut 97.7 2.4E-05 8.1E-10 72.9 5.3 40 20-61 2-41 (367)
224 2bry_A NEDD9 interacting prote 97.7 1.2E-05 4.1E-10 78.1 3.2 160 107-309 37-206 (497)
225 3ab1_A Ferredoxin--NADP reduct 97.7 0.00014 4.6E-09 67.1 9.3 90 18-122 162-265 (360)
226 2q7v_A Thioredoxin reductase; 97.7 0.00024 8.3E-09 64.3 10.9 87 18-122 151-251 (325)
227 4dsg_A UDP-galactopyranose mut 97.7 4.2E-05 1.4E-09 74.0 5.9 44 18-62 8-51 (484)
228 2ywl_A Thioredoxin reductase r 97.7 0.00011 3.7E-09 60.8 7.6 35 161-216 3-37 (180)
229 3ihm_A Styrene monooxygenase A 97.7 3.4E-05 1.2E-09 73.4 5.0 35 18-54 21-55 (430)
230 3dje_A Fructosyl amine: oxygen 97.6 4.9E-05 1.7E-09 72.1 5.9 38 18-57 5-43 (438)
231 2z3y_A Lysine-specific histone 97.6 6.5E-05 2.2E-09 75.5 7.0 43 17-61 105-147 (662)
232 2x8g_A Thioredoxin glutathione 97.6 0.00022 7.7E-09 70.6 10.6 91 18-122 285-397 (598)
233 3r9u_A Thioredoxin reductase; 97.6 0.00033 1.1E-08 62.8 10.8 87 18-122 146-246 (315)
234 3g3e_A D-amino-acid oxidase; F 97.6 3.5E-05 1.2E-09 70.9 4.3 36 20-55 1-40 (351)
235 2a87_A TRXR, TR, thioredoxin r 97.6 0.00031 1E-08 64.0 10.6 87 18-122 154-254 (335)
236 2q0l_A TRXR, thioredoxin reduc 97.6 0.00035 1.2E-08 62.8 10.8 87 18-122 142-243 (311)
237 1fl2_A Alkyl hydroperoxide red 97.6 0.0003 1E-08 63.1 10.3 86 18-122 143-244 (310)
238 1vdc_A NTR, NADPH dependent th 97.6 0.00035 1.2E-08 63.4 10.9 87 18-122 158-261 (333)
239 3k30_A Histamine dehydrogenase 97.6 0.00024 8.1E-09 71.7 10.1 94 17-122 521-626 (690)
240 2xag_A Lysine-specific histone 97.6 9.1E-05 3.1E-09 76.3 6.9 42 17-60 276-317 (852)
241 3l8k_A Dihydrolipoyl dehydroge 97.5 0.00031 1E-08 67.4 10.0 91 18-123 171-275 (466)
242 1c0p_A D-amino acid oxidase; a 97.5 0.00011 3.9E-09 67.7 6.3 36 18-55 5-40 (363)
243 3cty_A Thioredoxin reductase; 97.5 0.00041 1.4E-08 62.6 9.8 85 19-122 155-254 (319)
244 3f8d_A Thioredoxin reductase ( 97.5 0.00049 1.7E-08 61.8 10.3 86 18-121 153-252 (323)
245 1d5t_A Guanine nucleotide diss 97.5 9E-05 3.1E-09 70.5 5.5 42 18-61 5-46 (433)
246 2oln_A NIKD protein; flavoprot 97.5 9.3E-05 3.2E-09 69.2 5.3 36 19-56 4-39 (397)
247 1b37_A Protein (polyamine oxid 97.5 0.0001 3.4E-09 70.8 5.5 42 18-61 3-45 (472)
248 4at0_A 3-ketosteroid-delta4-5a 97.5 0.0001 3.4E-09 71.7 5.3 38 19-58 41-78 (510)
249 2aqj_A Tryptophan halogenase, 97.4 0.00014 5E-09 71.0 6.2 36 18-55 4-42 (538)
250 2e4g_A Tryptophan halogenase; 97.4 0.00016 5.6E-09 70.9 6.1 37 18-54 24-61 (550)
251 2pyx_A Tryptophan halogenase; 97.4 0.00016 5.4E-09 70.6 5.9 36 18-55 6-53 (526)
252 3fbs_A Oxidoreductase; structu 97.4 0.00037 1.3E-08 61.9 7.8 83 18-122 140-228 (297)
253 3lzw_A Ferredoxin--NADP reduct 97.4 0.00076 2.6E-08 60.8 10.0 85 19-122 154-252 (332)
254 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00086 3E-08 63.8 10.4 79 18-124 211-296 (447)
255 4a5l_A Thioredoxin reductase; 97.3 0.00085 2.9E-08 60.2 9.5 36 18-55 151-186 (314)
256 4gut_A Lysine-specific histone 97.3 0.00017 5.9E-09 73.6 5.3 39 18-58 335-373 (776)
257 3da1_A Glycerol-3-phosphate de 97.3 0.00014 4.7E-09 71.7 4.3 40 17-58 16-55 (561)
258 3g5s_A Methylenetetrahydrofola 97.3 0.00023 7.9E-09 66.5 5.6 34 19-54 1-34 (443)
259 2r0c_A REBC; flavin adenine di 97.3 0.00017 6E-09 70.7 5.0 36 19-56 26-61 (549)
260 1chu_A Protein (L-aspartate ox 97.3 0.00017 5.6E-09 70.8 4.7 37 18-57 7-43 (540)
261 2xve_A Flavin-containing monoo 97.3 0.00095 3.3E-08 64.0 9.7 81 18-123 196-279 (464)
262 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00091 3.1E-08 67.2 10.0 95 17-121 492-629 (671)
263 2weu_A Tryptophan 5-halogenase 97.2 0.00019 6.5E-09 69.6 4.6 34 19-54 2-38 (511)
264 3p1w_A Rabgdi protein; GDI RAB 97.2 0.00024 8.1E-09 68.4 5.1 42 18-61 19-60 (475)
265 3gwf_A Cyclohexanone monooxyge 97.2 0.0013 4.6E-08 64.3 10.4 37 17-55 176-212 (540)
266 2qcu_A Aerobic glycerol-3-phos 97.2 0.00025 8.5E-09 68.8 5.1 36 19-56 3-38 (501)
267 4gcm_A TRXR, thioredoxin reduc 97.2 0.0014 4.6E-08 59.0 9.5 36 18-55 144-179 (312)
268 1hyu_A AHPF, alkyl hydroperoxi 97.2 0.0015 5.1E-08 63.6 10.2 86 18-122 354-455 (521)
269 1pn0_A Phenol 2-monooxygenase; 97.2 0.00015 5.3E-09 72.8 3.2 35 19-55 8-47 (665)
270 2dkh_A 3-hydroxybenzoate hydro 97.2 0.00027 9.1E-09 70.7 4.9 36 19-56 32-68 (639)
271 3pl8_A Pyranose 2-oxidase; sub 97.2 0.00031 1.1E-08 70.0 5.3 40 19-60 46-85 (623)
272 3v76_A Flavoprotein; structura 97.2 0.00062 2.1E-08 64.4 7.1 98 159-295 27-159 (417)
273 1rp0_A ARA6, thiazole biosynth 97.2 0.0013 4.4E-08 58.7 8.7 109 160-311 40-160 (284)
274 2vdc_G Glutamate synthase [NAD 97.1 0.0015 5.2E-08 62.5 9.6 37 17-55 262-299 (456)
275 1o94_A Tmadh, trimethylamine d 97.1 0.00089 3.1E-08 68.0 8.2 92 18-122 527-648 (729)
276 2wdq_A Succinate dehydrogenase 97.1 0.00034 1.1E-08 69.3 4.8 36 19-56 7-42 (588)
277 3nlc_A Uncharacterized protein 97.1 0.0004 1.4E-08 68.1 5.2 35 159-214 107-141 (549)
278 4ap3_A Steroid monooxygenase; 97.1 0.0022 7.6E-08 62.8 10.0 36 18-55 190-225 (549)
279 2rgh_A Alpha-glycerophosphate 97.1 0.00047 1.6E-08 68.0 5.2 37 18-56 31-67 (571)
280 3uox_A Otemo; baeyer-villiger 97.1 0.0032 1.1E-07 61.6 11.1 36 18-55 184-219 (545)
281 2h88_A Succinate dehydrogenase 97.0 0.00043 1.5E-08 68.9 4.8 35 19-55 18-52 (621)
282 2i0z_A NAD(FAD)-utilizing dehy 97.0 0.00074 2.5E-08 64.4 6.2 34 160-214 27-60 (447)
283 3e1t_A Halogenase; flavoprotei 97.0 0.0019 6.5E-08 62.7 9.0 33 160-213 8-40 (512)
284 2bs2_A Quinol-fumarate reducta 97.0 0.0005 1.7E-08 68.9 4.7 36 19-56 5-40 (660)
285 3fwz_A Inner membrane protein 97.0 0.00093 3.2E-08 53.0 5.4 75 18-117 6-81 (140)
286 4a9w_A Monooxygenase; baeyer-v 96.9 0.0015 5E-08 59.4 7.2 34 18-54 162-195 (357)
287 3axb_A Putative oxidoreductase 96.9 0.00048 1.6E-08 65.4 3.9 35 18-53 22-56 (448)
288 3ayj_A Pro-enzyme of L-phenyla 96.9 0.00049 1.7E-08 69.3 4.0 39 18-56 55-100 (721)
289 2gag_A Heterotetrameric sarcos 96.9 0.0014 4.8E-08 68.6 7.4 82 19-122 284-385 (965)
290 2cul_A Glucose-inhibited divis 96.9 0.0023 7.9E-08 55.2 7.6 32 160-212 4-35 (232)
291 3lk7_A UDP-N-acetylmuramoylala 96.9 0.0013 4.4E-08 62.9 6.2 74 18-117 8-82 (451)
292 3gyx_A Adenylylsulfate reducta 96.8 0.00097 3.3E-08 66.9 5.0 37 19-55 22-62 (662)
293 1jnr_A Adenylylsulfate reducta 96.8 0.0011 3.7E-08 66.3 5.2 35 19-55 22-60 (643)
294 3sx6_A Sulfide-quinone reducta 96.7 0.004 1.4E-07 59.0 8.4 91 20-117 150-267 (437)
295 2x5o_A UDP-N-acetylmuramoylala 96.7 0.0017 5.7E-08 61.9 5.4 76 18-123 4-79 (439)
296 3h28_A Sulfide-quinone reducta 96.6 0.0049 1.7E-07 58.2 8.3 92 20-118 143-255 (430)
297 2gqf_A Hypothetical protein HI 96.6 0.0032 1.1E-07 59.2 6.9 34 160-214 5-38 (401)
298 1lqt_A FPRA; NADP+ derivative, 96.6 0.011 3.8E-07 56.4 10.6 38 18-55 146-202 (456)
299 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0045 1.5E-07 53.3 7.0 72 18-117 30-101 (223)
300 1gte_A Dihydropyrimidine dehyd 96.6 0.0075 2.6E-07 63.5 10.1 84 19-118 332-441 (1025)
301 3l4b_C TRKA K+ channel protien 96.6 0.0013 4.6E-08 56.2 3.7 32 20-53 1-32 (218)
302 1id1_A Putative potassium chan 96.6 0.0039 1.3E-07 50.0 6.2 78 19-117 3-81 (153)
303 3llv_A Exopolyphosphatase-rela 96.6 0.002 6.9E-08 50.9 4.4 33 19-53 6-38 (141)
304 1cjc_A Protein (adrenodoxin re 96.5 0.0098 3.4E-07 56.9 10.0 36 18-55 144-200 (460)
305 3cgv_A Geranylgeranyl reductas 96.4 0.0082 2.8E-07 55.5 8.3 35 160-215 5-39 (397)
306 1y0p_A Fumarate reductase flav 96.4 0.011 3.8E-07 58.0 9.4 36 159-215 126-161 (571)
307 3h8l_A NADH oxidase; membrane 96.4 0.012 4.2E-07 55.0 9.3 88 20-118 146-269 (409)
308 1kdg_A CDH, cellobiose dehydro 96.3 0.0029 9.8E-08 61.9 4.9 36 18-55 6-41 (546)
309 1ju2_A HydroxynitrIle lyase; f 96.3 0.0021 7.2E-08 62.8 3.5 36 18-56 25-60 (536)
310 3oz2_A Digeranylgeranylglycero 96.2 0.012 4.2E-07 53.9 8.2 34 161-215 6-39 (397)
311 2x3n_A Probable FAD-dependent 96.2 0.03 1E-06 52.0 10.8 35 160-215 7-41 (399)
312 3i3l_A Alkylhalidase CMLS; fla 96.2 0.024 8.2E-07 56.0 10.6 34 159-213 23-56 (591)
313 4g65_A TRK system potassium up 96.2 0.0017 6E-08 62.2 2.2 35 18-54 2-36 (461)
314 3t37_A Probable dehydrogenase; 96.1 0.0037 1.3E-07 60.5 4.5 36 18-54 16-51 (526)
315 3eag_A UDP-N-acetylmuramate:L- 96.1 0.02 6.8E-07 52.1 8.8 72 18-117 3-76 (326)
316 2qa1_A PGAE, polyketide oxygen 96.0 0.015 5.2E-07 56.1 8.3 37 158-215 10-46 (500)
317 2gjc_A Thiazole biosynthetic e 96.0 0.0095 3.2E-07 54.3 6.4 112 160-311 66-193 (326)
318 1qo8_A Flavocytochrome C3 fuma 96.0 0.0085 2.9E-07 58.8 6.5 35 160-215 122-156 (566)
319 3q9t_A Choline dehydrogenase a 96.0 0.0054 1.8E-07 60.5 4.8 37 18-55 5-41 (577)
320 3kkj_A Amine oxidase, flavin-c 96.0 0.0052 1.8E-07 52.4 4.2 34 161-215 4-37 (336)
321 2g1u_A Hypothetical protein TM 95.9 0.0094 3.2E-07 47.9 5.3 36 17-54 17-52 (155)
322 2gmh_A Electron transfer flavo 95.9 0.016 5.3E-07 57.2 7.7 35 160-215 36-76 (584)
323 1d4d_A Flavocytochrome C fumar 95.9 0.019 6.3E-07 56.5 8.2 35 159-214 126-160 (572)
324 2qa2_A CABE, polyketide oxygen 95.9 0.012 4.3E-07 56.7 6.8 37 158-215 11-47 (499)
325 1lss_A TRK system potassium up 95.8 0.011 3.9E-07 45.9 5.1 33 19-53 4-36 (140)
326 1pzg_A LDH, lactate dehydrogen 95.7 0.032 1.1E-06 50.9 8.6 36 17-54 7-43 (331)
327 3qvp_A Glucose oxidase; oxidor 95.7 0.0077 2.6E-07 59.4 4.5 37 17-54 17-53 (583)
328 1n4w_A CHOD, cholesterol oxida 95.6 0.0091 3.1E-07 57.8 4.7 36 19-56 5-40 (504)
329 4dgk_A Phytoene dehydrogenase; 95.5 0.0074 2.5E-07 57.9 3.5 35 160-215 2-36 (501)
330 1coy_A Cholesterol oxidase; ox 95.5 0.012 4.1E-07 57.0 4.9 36 18-55 10-45 (507)
331 3vrd_B FCCB subunit, flavocyto 95.4 0.018 6.2E-07 53.5 5.8 38 159-215 2-39 (401)
332 3jsk_A Cypbp37 protein; octame 95.4 0.016 5.6E-07 53.1 5.3 34 160-214 80-115 (344)
333 3fmw_A Oxygenase; mithramycin, 95.2 0.026 8.7E-07 55.5 6.3 35 160-215 50-84 (570)
334 3nep_X Malate dehydrogenase; h 95.2 0.075 2.6E-06 48.1 8.8 35 20-54 1-35 (314)
335 1pjq_A CYSG, siroheme synthase 95.1 0.029 1E-06 53.5 6.5 34 18-53 11-44 (457)
336 3l9w_A Glutathione-regulated p 95.1 0.012 4.1E-07 55.5 3.4 35 18-54 3-37 (413)
337 4fk1_A Putative thioredoxin re 95.0 0.07 2.4E-06 47.5 8.3 82 19-120 146-237 (304)
338 2jbv_A Choline oxidase; alcoho 95.0 0.019 6.5E-07 56.1 4.9 37 18-55 12-48 (546)
339 1gpe_A Protein (glucose oxidas 95.0 0.025 8.4E-07 55.8 5.7 37 18-55 23-59 (587)
340 3fim_B ARYL-alcohol oxidase; A 94.9 0.013 4.6E-07 57.5 3.2 36 19-55 2-37 (566)
341 3ic5_A Putative saccharopine d 94.9 0.031 1E-06 41.9 4.7 34 19-53 5-38 (118)
342 1vg0_A RAB proteins geranylger 94.8 0.031 1.1E-06 55.6 5.8 42 18-61 7-48 (650)
343 3doj_A AT3G25530, dehydrogenas 94.8 0.034 1.2E-06 50.1 5.4 41 12-54 14-54 (310)
344 3vtf_A UDP-glucose 6-dehydroge 94.7 0.033 1.1E-06 52.8 5.4 37 17-55 19-55 (444)
345 3dfz_A SIRC, precorrin-2 dehyd 94.7 0.058 2E-06 46.3 6.5 53 158-238 30-82 (223)
346 1oju_A MDH, malate dehydrogena 94.7 0.046 1.6E-06 49.0 6.1 35 20-54 1-35 (294)
347 4hb9_A Similarities with proba 94.7 0.024 8.1E-07 52.4 4.3 35 160-215 2-36 (412)
348 1yvv_A Amine oxidase, flavin-c 94.5 0.029 1E-06 50.4 4.3 34 160-214 3-36 (336)
349 2hmt_A YUAA protein; RCK, KTN, 94.5 0.035 1.2E-06 43.2 4.2 33 19-53 6-38 (144)
350 3c85_A Putative glutathione-re 94.3 0.052 1.8E-06 44.6 5.1 33 19-53 39-72 (183)
351 1kyq_A Met8P, siroheme biosynt 94.2 0.03 1E-06 49.6 3.8 35 18-54 12-46 (274)
352 4dio_A NAD(P) transhydrogenase 94.2 0.056 1.9E-06 50.6 5.6 35 18-54 189-223 (405)
353 3hyw_A Sulfide-quinone reducta 94.1 0.038 1.3E-06 52.1 4.5 37 160-215 3-39 (430)
354 2jae_A L-amino acid oxidase; o 94.0 0.06 2E-06 51.4 5.6 37 157-214 9-45 (489)
355 3nrn_A Uncharacterized protein 94.0 0.041 1.4E-06 51.4 4.4 34 160-214 1-34 (421)
356 2e5v_A L-aspartate oxidase; ar 94.0 0.077 2.6E-06 50.7 6.4 31 161-212 1-31 (472)
357 3p2y_A Alanine dehydrogenase/p 93.8 0.061 2.1E-06 49.9 5.0 35 18-54 183-217 (381)
358 1f0y_A HCDH, L-3-hydroxyacyl-C 93.8 0.08 2.7E-06 47.3 5.7 35 18-54 14-48 (302)
359 2iid_A L-amino-acid oxidase; f 93.8 0.039 1.3E-06 52.8 3.8 37 158-215 32-68 (498)
360 3ka7_A Oxidoreductase; structu 93.7 0.046 1.6E-06 51.0 4.2 34 160-214 1-34 (425)
361 3nks_A Protoporphyrinogen oxid 93.7 0.055 1.9E-06 51.3 4.8 34 160-213 3-37 (477)
362 2xdo_A TETX2 protein; tetracyc 93.7 0.066 2.3E-06 49.7 5.2 35 159-214 26-60 (398)
363 1lld_A L-lactate dehydrogenase 93.6 0.075 2.6E-06 47.8 5.2 34 18-53 6-41 (319)
364 3alj_A 2-methyl-3-hydroxypyrid 93.6 0.059 2E-06 49.6 4.6 36 159-215 11-46 (379)
365 3c96_A Flavin-containing monoo 93.5 0.064 2.2E-06 50.0 4.7 36 160-215 5-40 (410)
366 4a7p_A UDP-glucose dehydrogena 93.5 0.16 5.4E-06 48.3 7.4 36 19-56 8-43 (446)
367 3g5s_A Methylenetetrahydrofola 93.5 0.068 2.3E-06 50.0 4.7 33 160-213 2-34 (443)
368 2vou_A 2,6-dihydroxypyridine h 93.4 0.064 2.2E-06 49.8 4.6 36 159-215 5-40 (397)
369 4gde_A UDP-galactopyranose mut 93.4 0.047 1.6E-06 52.2 3.8 35 160-214 11-45 (513)
370 3rp8_A Flavoprotein monooxygen 93.4 0.068 2.3E-06 49.7 4.7 37 158-215 22-58 (407)
371 3ihm_A Styrene monooxygenase A 93.4 0.051 1.7E-06 51.2 3.9 34 159-213 22-55 (430)
372 4hv4_A UDP-N-acetylmuramate--L 93.4 0.18 6.1E-06 48.5 7.8 72 16-117 19-91 (494)
373 3k7m_X 6-hydroxy-L-nicotine ox 93.4 0.055 1.9E-06 50.6 4.1 33 161-214 3-35 (431)
374 2a9f_A Putative malic enzyme ( 93.4 0.082 2.8E-06 49.1 5.1 35 17-53 186-221 (398)
375 3c4a_A Probable tryptophan hyd 93.3 0.052 1.8E-06 50.1 3.8 35 160-215 1-37 (381)
376 3dme_A Conserved exported prot 93.3 0.066 2.3E-06 48.5 4.4 33 160-213 5-37 (369)
377 1x13_A NAD(P) transhydrogenase 93.2 0.092 3.1E-06 49.2 5.2 35 18-54 171-205 (401)
378 2oln_A NIKD protein; flavoprot 93.2 0.073 2.5E-06 49.2 4.5 34 160-214 5-38 (397)
379 3nyc_A D-arginine dehydrogenas 93.1 0.075 2.6E-06 48.5 4.5 35 158-214 8-42 (381)
380 2b9w_A Putative aminooxidase; 93.1 0.078 2.7E-06 49.4 4.7 38 158-215 5-42 (424)
381 1l7d_A Nicotinamide nucleotide 93.1 0.11 3.7E-06 48.3 5.6 35 18-54 171-205 (384)
382 1ryi_A Glycine oxidase; flavop 93.1 0.07 2.4E-06 48.9 4.3 33 160-213 18-50 (382)
383 1ks9_A KPA reductase;, 2-dehyd 93.1 0.11 3.7E-06 45.7 5.4 34 20-55 1-34 (291)
384 1rsg_A FMS1 protein; FAD bindi 93.1 0.062 2.1E-06 51.9 3.9 36 159-214 8-43 (516)
385 3nix_A Flavoprotein/dehydrogen 93.0 0.082 2.8E-06 49.2 4.6 33 160-213 6-38 (421)
386 3ic5_A Putative saccharopine d 92.9 0.11 3.6E-06 38.9 4.4 36 158-213 4-39 (118)
387 3i83_A 2-dehydropantoate 2-red 92.9 0.11 3.8E-06 46.8 5.2 32 20-53 3-34 (320)
388 3slk_A Polyketide synthase ext 92.9 0.86 2.9E-05 46.5 12.3 73 17-94 344-420 (795)
389 4g65_A TRK system potassium up 92.9 0.14 4.7E-06 48.9 6.0 79 16-117 232-310 (461)
390 2ew2_A 2-dehydropantoate 2-red 92.9 0.11 3.7E-06 46.3 5.1 33 19-53 3-35 (316)
391 2uzz_A N-methyl-L-tryptophan o 92.9 0.062 2.1E-06 49.0 3.5 33 161-214 4-36 (372)
392 2raf_A Putative dinucleotide-b 92.8 0.14 4.8E-06 43.2 5.4 36 18-55 18-53 (209)
393 1vl6_A Malate oxidoreductase; 92.8 0.11 3.9E-06 48.0 5.1 34 18-53 191-225 (388)
394 2gf3_A MSOX, monomeric sarcosi 92.8 0.085 2.9E-06 48.4 4.3 34 160-214 4-37 (389)
395 3i6d_A Protoporphyrinogen oxid 92.7 0.046 1.6E-06 51.6 2.4 36 160-215 6-46 (470)
396 4e12_A Diketoreductase; oxidor 92.6 0.14 4.9E-06 45.3 5.5 34 19-54 4-37 (283)
397 3oj0_A Glutr, glutamyl-tRNA re 92.6 0.064 2.2E-06 42.2 2.8 33 19-53 21-53 (144)
398 4ffl_A PYLC; amino acid, biosy 92.6 0.14 4.7E-06 46.9 5.5 35 19-55 1-35 (363)
399 1y56_B Sarcosine oxidase; dehy 92.5 0.085 2.9E-06 48.3 4.0 33 160-213 6-38 (382)
400 3fwz_A Inner membrane protein 92.5 0.2 6.7E-06 39.2 5.6 35 158-213 6-40 (140)
401 2g1u_A Hypothetical protein TM 92.5 0.14 4.9E-06 40.7 4.9 35 158-213 18-52 (155)
402 1c0p_A D-amino acid oxidase; a 92.5 0.13 4.4E-06 46.9 5.1 34 159-213 6-39 (363)
403 3k96_A Glycerol-3-phosphate de 92.5 0.13 4.6E-06 47.2 5.2 35 18-54 28-62 (356)
404 1k0i_A P-hydroxybenzoate hydro 92.4 0.073 2.5E-06 49.1 3.3 34 160-214 3-36 (394)
405 2ivd_A PPO, PPOX, protoporphyr 92.4 0.1 3.5E-06 49.5 4.4 37 158-215 15-51 (478)
406 2e1m_A L-glutamate oxidase; L- 92.4 0.11 3.9E-06 48.1 4.6 34 158-212 43-76 (376)
407 3ghy_A Ketopantoate reductase 92.4 0.13 4.6E-06 46.6 5.0 33 19-53 3-35 (335)
408 1guz_A Malate dehydrogenase; o 92.3 0.16 5.6E-06 45.6 5.5 35 20-54 1-35 (310)
409 3dje_A Fructosyl amine: oxygen 92.3 0.1 3.4E-06 49.0 4.2 36 159-214 6-41 (438)
410 2v6b_A L-LDH, L-lactate dehydr 92.2 0.15 5.1E-06 45.8 5.1 34 20-53 1-34 (304)
411 1s3e_A Amine oxidase [flavin-c 92.2 0.095 3.2E-06 50.5 4.0 35 160-215 5-39 (520)
412 1kyq_A Met8P, siroheme biosynt 92.2 0.12 4.2E-06 45.7 4.4 34 158-212 12-45 (274)
413 2bcg_G Secretory pathway GDP d 92.2 0.12 4.3E-06 48.9 4.7 35 159-214 11-45 (453)
414 3dtt_A NADP oxidoreductase; st 92.2 0.17 5.8E-06 43.7 5.2 36 17-54 17-52 (245)
415 1y6j_A L-lactate dehydrogenase 92.1 0.16 5.4E-06 46.0 5.1 37 18-54 6-42 (318)
416 3hn2_A 2-dehydropantoate 2-red 92.1 0.12 4.2E-06 46.4 4.3 32 20-53 3-34 (312)
417 3atr_A Conserved archaeal prot 92.1 0.12 4E-06 49.0 4.4 34 160-214 7-40 (453)
418 2ewd_A Lactate dehydrogenase,; 91.9 0.19 6.4E-06 45.3 5.4 34 19-54 4-38 (317)
419 1pjc_A Protein (L-alanine dehy 91.9 0.18 6.2E-06 46.4 5.4 33 19-53 167-199 (361)
420 1jw9_B Molybdopterin biosynthe 91.9 0.17 5.9E-06 44.0 4.9 35 19-54 31-65 (249)
421 2o3j_A UDP-glucose 6-dehydroge 91.9 0.19 6.4E-06 48.2 5.6 37 18-54 8-44 (481)
422 2y0c_A BCEC, UDP-glucose dehyd 91.9 0.17 5.8E-06 48.5 5.3 35 18-54 7-41 (478)
423 3qj4_A Renalase; FAD/NAD(P)-bi 91.8 0.14 4.8E-06 46.3 4.5 36 160-213 2-37 (342)
424 3ado_A Lambda-crystallin; L-gu 91.8 0.14 4.8E-06 46.3 4.4 35 18-54 5-39 (319)
425 1sez_A Protoporphyrinogen oxid 91.8 0.15 5.1E-06 48.8 4.8 37 158-215 12-48 (504)
426 3g79_A NDP-N-acetyl-D-galactos 91.8 0.19 6.5E-06 48.1 5.5 36 18-55 17-54 (478)
427 3llv_A Exopolyphosphatase-rela 91.8 0.19 6.4E-06 39.1 4.7 22 159-180 6-27 (141)
428 1bg6_A N-(1-D-carboxylethyl)-L 91.8 0.19 6.3E-06 45.8 5.3 33 19-53 4-36 (359)
429 3pqe_A L-LDH, L-lactate dehydr 91.7 0.21 7.2E-06 45.3 5.4 36 18-53 4-39 (326)
430 3k6j_A Protein F01G10.3, confi 91.6 0.29 9.8E-06 46.6 6.5 37 17-55 52-88 (460)
431 2bi7_A UDP-galactopyranose mut 91.6 0.17 5.7E-06 47.0 4.8 34 160-214 4-37 (384)
432 3gg2_A Sugar dehydrogenase, UD 91.5 0.19 6.4E-06 47.8 5.1 33 20-54 3-35 (450)
433 3ps9_A TRNA 5-methylaminomethy 91.5 0.18 6.3E-06 50.3 5.3 34 159-213 272-305 (676)
434 2vns_A Metalloreductase steap3 91.5 0.19 6.5E-06 42.5 4.7 34 18-53 27-60 (215)
435 2hjr_A Malate dehydrogenase; m 91.5 0.24 8.2E-06 45.0 5.6 34 19-54 14-48 (328)
436 2yg5_A Putrescine oxidase; oxi 91.5 0.15 5.1E-06 48.0 4.4 34 160-214 6-39 (453)
437 3ggo_A Prephenate dehydrogenas 91.4 0.26 8.8E-06 44.4 5.8 48 7-54 20-68 (314)
438 3ihg_A RDME; flavoenzyme, anth 91.4 0.16 5.5E-06 49.1 4.7 35 160-215 6-40 (535)
439 1t2d_A LDH-P, L-lactate dehydr 91.4 0.26 9E-06 44.6 5.7 34 19-54 4-38 (322)
440 3g17_A Similar to 2-dehydropan 91.3 0.14 4.9E-06 45.5 3.9 33 20-54 3-35 (294)
441 3q2o_A Phosphoribosylaminoimid 91.3 0.29 1E-05 45.3 6.1 40 14-55 9-48 (389)
442 3g3e_A D-amino-acid oxidase; F 91.3 0.12 4.2E-06 46.8 3.5 33 161-213 2-39 (351)
443 3gvi_A Malate dehydrogenase; N 91.3 0.26 8.9E-06 44.7 5.6 35 18-54 6-41 (324)
444 3pef_A 6-phosphogluconate dehy 91.2 0.22 7.6E-06 44.0 5.0 33 20-54 2-34 (287)
445 3g0o_A 3-hydroxyisobutyrate de 91.2 0.24 8.1E-06 44.2 5.3 35 18-54 6-40 (303)
446 2eez_A Alanine dehydrogenase; 91.2 0.24 8.1E-06 45.7 5.4 34 18-53 165-198 (369)
447 3tl2_A Malate dehydrogenase; c 91.2 0.27 9.2E-06 44.4 5.6 34 18-53 7-41 (315)
448 2vhw_A Alanine dehydrogenase; 91.1 0.24 8.3E-06 45.8 5.4 34 18-53 167-200 (377)
449 3c4n_A Uncharacterized protein 91.1 0.13 4.6E-06 47.8 3.6 33 160-213 37-71 (405)
450 3ces_A MNMG, tRNA uridine 5-ca 91.1 0.16 5.6E-06 50.4 4.4 33 160-213 29-61 (651)
451 2r0c_A REBC; flavin adenine di 91.1 0.17 5.8E-06 49.3 4.4 35 160-215 27-61 (549)
452 3pvc_A TRNA 5-methylaminomethy 91.1 0.24 8.3E-06 49.6 5.7 34 159-213 264-297 (689)
453 1jw9_B Molybdopterin biosynthe 91.0 0.17 5.7E-06 44.1 3.9 36 158-213 30-65 (249)
454 2vvm_A Monoamine oxidase N; FA 91.0 0.16 5.5E-06 48.4 4.2 35 160-215 40-74 (495)
455 3ego_A Probable 2-dehydropanto 91.0 0.25 8.5E-06 44.3 5.1 32 19-53 2-33 (307)
456 2q3e_A UDP-glucose 6-dehydroge 91.0 0.24 8.3E-06 47.2 5.3 36 19-54 5-40 (467)
457 1id1_A Putative potassium chan 91.0 0.25 8.5E-06 39.1 4.6 34 159-213 3-36 (153)
458 2dpo_A L-gulonate 3-dehydrogen 90.9 0.24 8.3E-06 44.8 5.0 35 18-54 5-39 (319)
459 1lss_A TRK system potassium up 90.8 0.24 8.4E-06 38.0 4.4 22 159-180 4-25 (140)
460 3gpi_A NAD-dependent epimerase 90.8 0.28 9.6E-06 43.0 5.3 35 19-55 3-37 (286)
461 2qcu_A Aerobic glycerol-3-phos 90.8 0.16 5.6E-06 48.7 4.0 33 160-213 4-36 (501)
462 4dsg_A UDP-galactopyranose mut 90.8 0.21 7.1E-06 47.8 4.7 36 159-214 9-44 (484)
463 3phh_A Shikimate dehydrogenase 90.8 0.32 1.1E-05 42.9 5.5 34 19-54 118-151 (269)
464 2zxi_A TRNA uridine 5-carboxym 90.8 0.17 5.8E-06 50.1 4.1 33 160-213 28-60 (637)
465 3p7m_A Malate dehydrogenase; p 90.8 0.32 1.1E-05 44.1 5.6 35 18-54 4-39 (321)
466 2i6t_A Ubiquitin-conjugating e 90.7 0.27 9.1E-06 44.1 5.1 37 18-54 13-49 (303)
467 1z82_A Glycerol-3-phosphate de 90.7 0.27 9.3E-06 44.5 5.2 33 19-53 14-46 (335)
468 1mv8_A GMD, GDP-mannose 6-dehy 90.7 0.22 7.5E-06 47.0 4.7 33 20-54 1-33 (436)
469 3ojo_A CAP5O; rossmann fold, c 90.7 0.37 1.3E-05 45.5 6.2 35 19-55 11-45 (431)
470 2h78_A Hibadh, 3-hydroxyisobut 90.7 0.25 8.5E-06 44.0 4.8 34 19-54 3-36 (302)
471 3cp8_A TRNA uridine 5-carboxym 90.7 0.19 6.5E-06 49.9 4.4 33 160-213 22-54 (641)
472 3hdq_A UDP-galactopyranose mut 90.6 0.21 7E-06 46.7 4.4 34 159-213 29-62 (397)
473 1a5z_A L-lactate dehydrogenase 90.6 0.25 8.6E-06 44.6 4.8 32 20-53 1-34 (319)
474 1nyt_A Shikimate 5-dehydrogena 90.5 0.32 1.1E-05 42.8 5.3 34 18-53 118-151 (271)
475 4dll_A 2-hydroxy-3-oxopropiona 90.5 0.29 9.8E-06 44.1 5.1 35 18-54 30-64 (320)
476 1txg_A Glycerol-3-phosphate de 90.5 0.26 8.9E-06 44.3 4.8 31 20-52 1-31 (335)
477 3ius_A Uncharacterized conserv 90.5 0.3 1E-05 42.7 5.1 34 19-54 5-38 (286)
478 3oj0_A Glutr, glutamyl-tRNA re 90.4 0.18 6.2E-06 39.6 3.3 34 159-213 21-54 (144)
479 1jay_A Coenzyme F420H2:NADP+ o 90.4 0.31 1E-05 40.8 5.0 32 20-53 1-33 (212)
480 3lov_A Protoporphyrinogen oxid 90.4 0.16 5.5E-06 48.1 3.5 35 160-214 5-40 (475)
481 4huj_A Uncharacterized protein 90.4 0.2 6.9E-06 42.5 3.8 35 18-54 22-57 (220)
482 1ldn_A L-lactate dehydrogenase 90.4 0.36 1.2E-05 43.5 5.7 36 18-53 5-40 (316)
483 2uyy_A N-PAC protein; long-cha 90.4 0.32 1.1E-05 43.6 5.3 34 19-54 30-63 (316)
484 3ldh_A Lactate dehydrogenase; 90.4 0.42 1.4E-05 43.4 6.1 36 18-53 20-55 (330)
485 3pdu_A 3-hydroxyisobutyrate de 90.3 0.22 7.4E-06 44.1 4.1 33 20-54 2-34 (287)
486 3d0o_A L-LDH 1, L-lactate dehy 90.3 0.35 1.2E-05 43.6 5.6 36 18-53 5-40 (317)
487 3hwr_A 2-dehydropantoate 2-red 90.3 0.31 1.1E-05 43.9 5.1 33 18-53 18-50 (318)
488 1v0j_A UDP-galactopyranose mut 90.3 0.17 5.7E-06 47.2 3.4 35 159-214 7-42 (399)
489 2pv7_A T-protein [includes: ch 90.3 0.41 1.4E-05 42.6 5.9 35 18-54 20-55 (298)
490 2egg_A AROE, shikimate 5-dehyd 90.2 0.34 1.1E-05 43.3 5.3 34 18-53 140-174 (297)
491 3hn7_A UDP-N-acetylmuramate-L- 90.2 0.81 2.8E-05 44.3 8.4 72 18-117 18-90 (524)
492 3vku_A L-LDH, L-lactate dehydr 90.2 0.34 1.2E-05 43.9 5.3 37 17-53 7-43 (326)
493 4aj2_A L-lactate dehydrogenase 90.2 0.42 1.4E-05 43.4 5.9 38 16-53 16-53 (331)
494 3pid_A UDP-glucose 6-dehydroge 90.2 0.32 1.1E-05 45.9 5.3 35 18-55 35-69 (432)
495 3qha_A Putative oxidoreductase 90.1 0.27 9.2E-06 43.8 4.6 35 19-55 15-49 (296)
496 1i8t_A UDP-galactopyranose mut 90.1 0.26 8.7E-06 45.4 4.5 32 161-213 3-34 (367)
497 3ew7_A LMO0794 protein; Q8Y8U8 90.1 0.36 1.2E-05 40.2 5.2 33 20-54 1-34 (221)
498 2z3y_A Lysine-specific histone 90.1 0.24 8.3E-06 49.4 4.6 36 158-214 106-141 (662)
499 1dlj_A UDP-glucose dehydrogena 90.0 0.28 9.7E-06 45.8 4.8 32 20-54 1-32 (402)
500 2aqj_A Tryptophan halogenase, 90.0 0.25 8.5E-06 47.9 4.6 37 159-213 5-41 (538)
No 1
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=100.00 E-value=1.4e-38 Score=308.60 Aligned_cols=306 Identities=48% Similarity=0.809 Sum_probs=245.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
.+++|+||||||||+++|..|++.+++.+|+|||+++.+||++++++.|+++..+++..++.+++++.+++++.++.++.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 84 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRCAFYGNVEVGR 84 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTEEEEBSCCBTT
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCcEEEeeeEEee
Confidence 46799999999999999999999877799999999999999999999888877788888888899999999999988766
Q ss_pred EEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHH
Q 019876 98 SVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARI 177 (334)
Q Consensus 98 ~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~ 177 (334)
++++.+....||+||||||+..++.|++||.+.+++++++++..+++..+++......+ .+++|+|||+|++|+|+|..
T Consensus 85 ~V~~~~~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~-~~~~vvVIGgG~~g~e~A~~ 163 (460)
T 1cjc_A 85 DVTVQELQDAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDL-SCDTAVILGQGNVALDVARI 163 (460)
T ss_dssp TBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCT-TSSEEEEESCSHHHHHHHHH
T ss_pred EEEeccceEEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCC-CCCEEEEECCCHHHHHHHHH
Confidence 66666555689999999999535888999998899999999998888776665443334 68999999999999999999
Q ss_pred HccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCchhhhhccHH
Q 019876 178 LLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRI 257 (334)
Q Consensus 178 L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~~ 257 (334)
|++..+++..|||++++++.+++.++++|+|++|++++...|+.+++++++..+++++.+++.+++. ........++.
T Consensus 164 L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~~~~~~--~~~~~~~~~~~ 241 (460)
T 1cjc_A 164 LLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDPADFLG--LQDRIKEAARP 241 (460)
T ss_dssp HHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCGGGGTT--HHHHTTTSCHH
T ss_pred HhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEechhhhcc--hhhhhhhccHH
Confidence 9999999999999999999999999988999999999999999999999988999999988877642 11111124566
Q ss_pred HHHHHHHHHHHHhcc-C--C--CCCCCceEEEEEeccccceeeccccCCC-CeeEEEEEEeeeecCCCCcceeecCCc
Q 019876 258 QRRVYELLSKAAASA-S--S--QPMLGQRELHFVFFRKPDSFLESNERSG-HVSGVHFEKTALKGGGPGKQYAVGTGE 329 (334)
Q Consensus 258 ~~~~~~~~~~~~~~~-~--~--~~~~~~~gv~~~~~~~~~~i~~~~~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~ 329 (334)
.+++.++|++.+.+. + . ......+||+|+++++|++|. +++++ ++++|++.++.+..+ +|+..++++|+
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~--~~~~~~~v~~v~~~~~~l~~~-~~~~~~~~~g~ 316 (460)
T 1cjc_A 242 RKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVL--PSPDGRRAAGIRLAVTRLEGI-GEATRAVPTGD 316 (460)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEE--ECTTSSSEEEEEEEEEEEESS-GGGCEEEEEEE
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEE--cCCCCceEEEEEEEEEEEccc-cCCCcccCCCc
Confidence 677777777665300 0 0 000123899999999999998 52126 899999987766432 23333444554
No 2
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=100.00 E-value=9.5e-39 Score=309.41 Aligned_cols=302 Identities=43% Similarity=0.683 Sum_probs=247.4
Q ss_pred CCeEEEECCchHHHHHHHHHhh-cCC----CCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCe
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK-AHQ----EAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNV 93 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~-~~~----~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (334)
+++|+||||||||++||.+|++ ..+ +.+|+|||+.+.+||.++|++.|++...+++..++.+++++.+++++.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~v~~~~~v 82 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPRFRFFGNV 82 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTTEEEEESC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCCCEEEeeE
Confidence 5799999999999999999999 722 39999999998999999999989888888888888888999999999887
Q ss_pred EEceEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCC-CCCCCCCCCCCeEEEEcCCHHHH
Q 019876 94 TLGSSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDG-KNLSPDLKSTDTAVILGQGNVAL 172 (334)
Q Consensus 94 ~v~~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~k~vvVIG~G~~g~ 172 (334)
.++.+++++++...||+||||||+..|+.+++||.+.++++++.++..+++.++++ ..+. .+ .+++|+|||+|++|+
T Consensus 83 ~v~~~v~~~~~~~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~-~~-~~~~vvVIG~G~~g~ 160 (456)
T 1lqt_A 83 VVGEHVQPGELSERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSP-DL-SGARAVVIGNGNVAL 160 (456)
T ss_dssp CBTTTBCHHHHHHHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCC-CC-CSSEEEEECCSHHHH
T ss_pred EECCEEEECCCeEeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchh-hc-CCCEEEEECCCHHHH
Confidence 76655666666678999999999944788899999888999999999888877655 2222 23 689999999999999
Q ss_pred HHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCchhhh
Q 019876 173 DVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEM 252 (334)
Q Consensus 173 e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~ 252 (334)
|+|..|++...++..||+++++++.|++.++++|++++|+++++..|+.+++++++..+++++++++.+++ ........
T Consensus 161 e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~lp~~~~~~~~~~~~-~~~~~~~~ 239 (456)
T 1lqt_A 161 DVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADLDGVDVVIDPAELD-GITDEDAA 239 (456)
T ss_dssp HHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGCTTEEEECCGGGGT-TCCHHHHH
T ss_pred HHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcCCCceeeeChHHhc-cchhhhhh
Confidence 99999999888889999999999999999988999999999999999999999999999999999888774 22221122
Q ss_pred hccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEeeeecCCCCcceeecCCce
Q 019876 253 KNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQYAVGTGEF 330 (334)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~ 330 (334)
..++..++..++|++.+.. ......+||+|+++++|++|. + ++++++|++.++++..+..|+..++.+|+.
T Consensus 240 ~~~~~~~~~~~~l~~~~~~---~~~~~~~gv~i~~~~~~~~i~--~--~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~ 310 (456)
T 1lqt_A 240 AVGKVCKQNIKVLRGYADR---EPRPGHRRMVFRFLTSPIEIK--G--KRKVERIVLGRNELVSDGSGRVAAKDTGER 310 (456)
T ss_dssp HHCHHHHHHHHHHHHHHTC---C-CTTSEEEEEECSEEEEEEE--C--SSSCCEEEEEEEEEEECSSSSEEEEEEEEE
T ss_pred hccHHHHHHHHHHHHHhhc---CCCCCCceEEEEeCCCCeEEe--c--CCcEeEEEEEEEEecCCCcccccccCCCce
Confidence 3456667777777776531 000122899999999999998 6 478999999988776665555556666654
No 3
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.97 E-value=6.4e-31 Score=254.34 Aligned_cols=237 Identities=25% Similarity=0.341 Sum_probs=181.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
.+.++|+||||||||+++|.+|++.+ ++|+|||+.+.+||++.|++ |.+..++++..+..+++++.|++|+.++.++
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G--~~V~v~e~~~~~GG~l~~gi-p~~~~~~~~~~~~~~~l~~~gv~~~~~~~v~ 196 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG--YEVHVYDRYDRMGGLLVYGI-PGFKLEKSVVERRVKLLADAGVIYHPNFEVG 196 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSCSTHHHHTS-CTTTSCHHHHHHHHHHHHHTTCEEETTCCBT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeccCCCCCeeeecC-CCccCCHHHHHHHHHHHHHCCcEEEeCCEec
Confidence 45789999999999999999999997 89999999999999999987 7777777888888888889999999998887
Q ss_pred eEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcC--CCCCCCCCC---CCCCCCeEEEEcCCHHH
Q 019876 97 SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNG--HPDGKNLSP---DLKSTDTAVILGQGNVA 171 (334)
Q Consensus 97 ~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~--~~~~~~~~~---~~~~~k~vvVIG~G~~g 171 (334)
.+++++++...||+||||||+..|+.+++||.+.+++++..+|+...+. ..+...... ....+++|+|||||++|
T Consensus 197 ~~v~~~~~~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a 276 (456)
T 2vdc_G 197 RDASLPELRRKHVAVLVATGVYKARDIKAPGSGLGNIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTA 276 (456)
T ss_dssp TTBCHHHHHSSCSEEEECCCCCEECCTTCSCCTTTTEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHH
T ss_pred cEEEhhHhHhhCCEEEEecCCCCCCCCCCCCCcCCCcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhH
Confidence 6666666667899999999996588889999988999988877653221 101000000 12378999999999999
Q ss_pred HHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCchhh
Q 019876 172 LDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEE 251 (334)
Q Consensus 172 ~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~ 251 (334)
+|+|..+.+ .|+++||+++|++....+....++
T Consensus 277 ~d~A~~~~r--------------------~Ga~~Vtiv~r~~~~~~p~~~~e~--------------------------- 309 (456)
T 2vdc_G 277 MDCVRTAIR--------------------QGATSVKCLYRRDRKNMPGSQREV--------------------------- 309 (456)
T ss_dssp HHHHHHHHH--------------------TTCSEEEEECSSCSTTCSSCHHHH---------------------------
T ss_pred HHHHHHHHH--------------------cCCCEEEEEEeCCccCCCCCHHHH---------------------------
Confidence 999999886 688789999998865222221111
Q ss_pred hhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEeeee-cCCCCcceeec-CCc
Q 019876 252 MKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALK-GGGPGKQYAVG-TGE 329 (334)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~~~~-~~~~~~~~~~~-~~~ 329 (334)
+ .+ .+.||+|++++.|++|. + ++++++|++.+.++. .+.+|+++|++ +|+
T Consensus 310 -----------~----~~---------~~~Gv~~~~~~~~~~i~--~--~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~ 361 (456)
T 2vdc_G 310 -----------A----HA---------EEEGVEFIWQAAPEGFT--G--DTVVTGVRAVRIHLGVADATGRQTPQVIEGS 361 (456)
T ss_dssp -----------H----HH---------HHTTCEEECCSSSCCEE--E--EEEEETTEEEEEEEEEEEECTTCCEEEEEEE
T ss_pred -----------H----HH---------HHCCCEEEeCCCceEEe--C--CCcEEEEEEEEEEecccCCcCCccccccCCc
Confidence 1 11 14589999999999998 6 578888888876654 24467776665 454
Q ss_pred eE
Q 019876 330 FE 331 (334)
Q Consensus 330 ~~ 331 (334)
.+
T Consensus 362 ~~ 363 (456)
T 2vdc_G 362 EF 363 (456)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 4
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.92 E-value=5.5e-25 Score=231.67 Aligned_cols=226 Identities=22% Similarity=0.337 Sum_probs=166.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
+.++|+||||||||++||.+|++.| + +|+|||+.+.+||.+.+++ |.+..++++..+..+++++.|++++.++.++
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--~~~Vtv~E~~~~~GG~~~~~i-p~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 262 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--YSDITIFEKQEYVGGLSTSEI-PQFRLPYDVVNFEIELMKDLGVKIICGKSLS 262 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSSSCSTHHHHTS-CTTTSCHHHHHHHHHHHHTTTCEEEESCCBS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--CCcEEEEeCCCCCCccccccC-CcccCCHHHHHHHHHHHHHCCcEEEcccEec
Confidence 4679999999999999999999997 7 7999999989999998877 7776667777777788889999999998875
Q ss_pred e-EEecccce-eccCeEEEeccCCCCCCCCC-CCcc-CCCccchhhHHHHhcCCC--CCCCCCCCC-CCCCeEEEEcCCH
Q 019876 97 S-SVSLSELR-QLYHVVVLAYGAESDRALGI-PGED-LIGVHSAREFVWWYNGHP--DGKNLSPDL-KSTDTAVILGQGN 169 (334)
Q Consensus 97 ~-~v~~~~~~-~~yd~lIlATGs~~p~~~~i-pG~~-~~~v~~~~~~~~~~~~~~--~~~~~~~~~-~~~k~vvVIG~G~ 169 (334)
. +++++++. ..||+||||||++.|+.+++ +|.+ .+++++..+|+...+... .+......+ ..+++|+|||||+
T Consensus 263 ~~~v~~~~~~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~ 342 (1025)
T 1gte_A 263 ENEITLNTLKEEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGD 342 (1025)
T ss_dssp TTSBCHHHHHHTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSH
T ss_pred cceEEhhhcCccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCCh
Confidence 3 45555543 58999999999954777765 4654 578998888876432110 000011111 2367999999999
Q ss_pred HHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCch
Q 019876 170 VALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDE 249 (334)
Q Consensus 170 ~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~ 249 (334)
+|+|+|..+.+ .|+++||+++|++....+..+.++
T Consensus 343 ~g~e~A~~~~~--------------------~G~~~Vtvv~r~~~~~~~~~~~e~------------------------- 377 (1025)
T 1gte_A 343 TAFDCATSALR--------------------CGARRVFLVFRKGFVNIRAVPEEV------------------------- 377 (1025)
T ss_dssp HHHHHHHHHHH--------------------TTCSEEEEECSSCGGGCCSCHHHH-------------------------
T ss_pred HHHHHHHHHHH--------------------cCCCEEEEEEecChhhCCCCHHHH-------------------------
Confidence 99999999986 787789999999843322222221
Q ss_pred hhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEeeeecCCCCcc
Q 019876 250 EEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTALKGGGPGKQ 322 (334)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~~~~~~~~~~~ 322 (334)
+.+ .+.||+|++++.+++|. + +++++++|++.+.+. +++|+.
T Consensus 378 -------------~~~-------------~~~Gv~~~~~~~~~~i~--~-~~g~v~~v~~~~~~~--~~~g~~ 419 (1025)
T 1gte_A 378 -------------ELA-------------KEEKCEFLPFLSPRKVI--V-KGGRIVAVQFVRTEQ--DETGKW 419 (1025)
T ss_dssp -------------HHH-------------HHTTCEEECSEEEEEEE--E-ETTEEEEEEEEEEEE--CTTSCE
T ss_pred -------------HHH-------------HHcCCEEEeCCCceEEE--c-cCCeEEEEEEEEeEE--cCCCCc
Confidence 111 14589999999999998 5 367899999886553 334543
No 5
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.90 E-value=3.1e-23 Score=200.40 Aligned_cols=215 Identities=16% Similarity=0.187 Sum_probs=140.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc----cccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF----GLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g----g~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
++|+|||||+||++||..|++.+++.+|+|||+++.+| +...+ .........++.....+.+.+.+++++.+..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAY-FNHTINELHEARYITEEELRRQKIQLLLNREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC-----------------CCCCHHHHHHTTEEEECSCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhh-hcCCCCCHHHhhcCCHHHHHHCCCEEEECCEE
Confidence 69999999999999999999996669999999998765 11111 10111111222222345556778998877665
Q ss_pred c------eEEec----ccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEE
Q 019876 96 G------SSVSL----SELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVIL 165 (334)
Q Consensus 96 ~------~~v~~----~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVI 165 (334)
. ..+.+ +...+.||+||||||+ .|..|++||.+.+++++.+++... ..+......+++++||
T Consensus 82 ~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~-~p~~p~i~g~~~~~v~~~~~~~~~-------~~~~~~~~~~~~vvVi 153 (452)
T 3oc4_A 82 VAMDVENQLIAWTRKEEQQWYSYDKLILATGA-SQFSTQIRGSQTEKLLKYKFLSGA-------LAAVPLLENSQTVAVI 153 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEECSEEEECCCC-CBCCCCCBTTTCTTEEEGGGCC-----------CCHHHHTCSEEEEE
T ss_pred EEEECCCCEEEEEecCceEEEEcCEEEECCCc-ccCCCCCCCCCCCCEEEeCCHHHH-------HHHHHHHhcCCEEEEE
Confidence 3 12322 2234689999999999 699999999988888876543211 1111112357999999
Q ss_pred cCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCC
Q 019876 166 GQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKS 245 (334)
Q Consensus 166 G~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~ 245 (334)
|+|++|+|+|..|.+ .|. +|++++|.+.++....++++.
T Consensus 154 GgG~~g~E~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~~~d~~~~-------------------- 192 (452)
T 3oc4_A 154 GAGPIGMEAIDFLVK--------------------MKK-TVHVFESLENLLPKYFDKEMV-------------------- 192 (452)
T ss_dssp CCSHHHHHHHHHHHH--------------------TTC-EEEEEESSSSSSTTTCCHHHH--------------------
T ss_pred CCCHHHHHHHHHHHh--------------------CCC-eEEEEEccCccccccCCHHHH--------------------
Confidence 999999999999986 665 699999998876543222222
Q ss_pred CCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEeee
Q 019876 246 PTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKTAL 314 (334)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~~~ 314 (334)
+.+.+.+. +.||+|++++.+++|. . .++++ .|.+.++.+
T Consensus 193 -----------------~~l~~~l~---------~~GV~i~~~~~v~~i~--~-~~~~v-~v~~~~g~i 231 (452)
T 3oc4_A 193 -----------------AEVQKSLE---------KQAVIFHFEETVLGIE--E-TANGI-VLETSEQEI 231 (452)
T ss_dssp -----------------HHHHHHHH---------TTTEEEEETCCEEEEE--E-CSSCE-EEEESSCEE
T ss_pred -----------------HHHHHHHH---------HcCCEEEeCCEEEEEE--c-cCCeE-EEEECCCEE
Confidence 12223332 5689999999999987 3 24566 565544333
No 6
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.90 E-value=2.2e-22 Score=184.64 Aligned_cols=180 Identities=17% Similarity=0.217 Sum_probs=123.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc-ccccCC---CCcc--hhHHHHHHHHHhhcCCcEEEe
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV-RSGVAP---DHPE--TKIVINQFSRVVQHERCSFFG 91 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~-~~~~~p---~~~~--~~~~~~~~~~~~~~~~i~~~~ 91 (334)
..++|+||||||||++||.+|++.+ ++|+|||+. .+||.+ +.++.+ .+.. ..++.........+.+..+..
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g--~~V~liE~~-~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRAN--LKTVMIERG-IPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQY 81 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEecC-CCCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccccc
Confidence 4589999999999999999999997 999999986 455554 445543 3322 235555555666666666655
Q ss_pred CeEEc-------eEEecccceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCCCCe
Q 019876 92 NVTLG-------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDT 161 (334)
Q Consensus 92 ~~~v~-------~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 161 (334)
+..+. ..+.....++.||+||||||+ .|+.|++||.+. .++.+...... ....+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs-~~~~~~ipG~~~~~~~~v~~~~~~~~-------------~~~~~k~ 147 (312)
T 4gcm_A 82 GDIKSVEDKGEYKVINFGNKELTAKAVIIATGA-EYKKIGVPGEQELGGRGVSYCAVCDG-------------AFFKNKR 147 (312)
T ss_dssp CCCCEEEECSSCEEEECSSCEEEEEEEEECCCE-EECCCCCTTTTTTBTTTEESCHHHHG-------------GGGTTCE
T ss_pred eeeeeeeeeecceeeccCCeEEEeceeEEcccC-ccCcCCCCChhhhCCccEEeeeccCc-------------cccCCCE
Confidence 43321 123334455789999999999 699999999763 23333211110 0125799
Q ss_pred EEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEE
Q 019876 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHI 237 (334)
Q Consensus 162 vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~ 237 (334)
|+|||||++|+|+|..|++ .|. +||+++|+++++.... .....++..++....
T Consensus 148 vvViGgG~ig~E~A~~l~~--------------------~g~-~Vtlv~~~~~~~~~~~--~~~~~~~~~~~~~~~ 200 (312)
T 4gcm_A 148 LFVIGGGDSAVEEGTFLTK--------------------FAD-KVTIVHRRDELRAQRI--LQDRAFKNDKIDFIW 200 (312)
T ss_dssp EEEECCSHHHHHHHHHHTT--------------------TCS-EEEEECSSSSCCSCHH--HHHHHHHCTTEEEEC
T ss_pred EEEECCCHHHHHHHHHHHh--------------------cCC-EEEEEecccccCcchh--HHHHHHHhcCcceee
Confidence 9999999999999999996 565 6999999988764332 223445555655543
No 7
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.89 E-value=1.3e-22 Score=185.80 Aligned_cols=165 Identities=17% Similarity=0.226 Sum_probs=115.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC----Cccccccc-----c--CCCCcchhHHHHHHHHHhhcCCc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT----PFGLVRSG-----V--APDHPETKIVINQFSRVVQHERC 87 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~----~gg~~~~~-----~--~p~~~~~~~~~~~~~~~~~~~~i 87 (334)
.++|+||||||||++||.+|++.+ .+|+|||+... ++|++... + +|......++..++.+.+.+.++
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g--~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~ 81 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSS--LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGT 81 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCc
Confidence 579999999999999999999997 99999999753 23333210 0 12223446777888888888888
Q ss_pred EEEeCeEEce-------EEec-ccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCC
Q 019876 88 SFFGNVTLGS-------SVSL-SELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKST 159 (334)
Q Consensus 88 ~~~~~~~v~~-------~v~~-~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
++........ .+.. +..++.||+||||||+ .|+.|++||.+........... ..... ..+..+
T Consensus 82 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~-~~~~~~ipG~~~~~~~~~~~~~-~~~~~-------~~~~~~ 152 (314)
T 4a5l_A 82 TIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA-TAKRMHVPGEDKYWQNGVSACA-ICDGA-------VPIFRN 152 (314)
T ss_dssp EEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE-EECCCCCTTHHHHBTTTEESCH-HHHTT-------SGGGTT
T ss_pred EEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccc-cccccCCCccccccccceeeeh-hhhhh-------hhhcCC
Confidence 8876654321 1222 2334689999999999 6999999998643222111111 11111 112367
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
++|+|||+|++|+|+|..|++ .|. +||+++|....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~--------------------~G~-~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTK--------------------YGS-KVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTT--------------------TSS-EEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHH--------------------hCC-eeeeecccccc
Confidence 999999999999999999996 675 69999987654
No 8
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.89 E-value=1.9e-23 Score=199.75 Aligned_cols=217 Identities=20% Similarity=0.210 Sum_probs=150.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc---cccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeE
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---VRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~---~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (334)
..++|+|||||+||++||..|++.++..+|+|||+++.++.. +......+......+.....+++.+.+++++.++.
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 87 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAE 87 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTTEEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCCcEEEeCCE
Confidence 457999999999999999999999855669999998764321 11112122222233333345566778999998854
Q ss_pred Ec------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCC-CCeEEEEc
Q 019876 95 LG------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKS-TDTAVILG 166 (334)
Q Consensus 95 v~------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~k~vvVIG 166 (334)
+. ..+.+.++ .+.||+||+|||+ .|+.|++||.+.++++..++...... . ...+.. +++|+|||
T Consensus 88 v~~id~~~~~v~~~~g~~~~~d~lvlAtG~-~~~~~~i~g~~~~~v~~~~~~~d~~~-l------~~~~~~~~~~vvViG 159 (415)
T 3lxd_A 88 VVSLDPAAHTVKLGDGSAIEYGKLIWATGG-DPRRLSCVGADLAGVHAVRTKEDADR-L------MAELDAGAKNAVVIG 159 (415)
T ss_dssp EEEEETTTTEEEETTSCEEEEEEEEECCCE-ECCCCBTTSSCCBTEECCCSHHHHHH-H------HHHHHTTCCEEEEEC
T ss_pred EEEEECCCCEEEECCCCEEEeeEEEEccCC-ccCCCCCCCccccCEEEEcCHHHHHH-H------HHHhhhcCCeEEEEC
Confidence 42 24555444 4689999999999 69999999988788875543322110 0 000113 79999999
Q ss_pred CCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCC
Q 019876 167 QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSP 246 (334)
Q Consensus 167 ~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~ 246 (334)
+|++|+|+|..|.+ .|. +||++++.+.++....++++.+.
T Consensus 160 gG~~g~e~A~~l~~--------------------~g~-~Vtvv~~~~~~l~~~~~~~~~~~------------------- 199 (415)
T 3lxd_A 160 GGYIGLEAAAVLTK--------------------FGV-NVTLLEALPRVLARVAGEALSEF------------------- 199 (415)
T ss_dssp CSHHHHHHHHHHHH--------------------TTC-EEEEEESSSSTTTTTSCHHHHHH-------------------
T ss_pred CCHHHHHHHHHHHh--------------------cCC-eEEEEecCCchhhhhcCHHHHHH-------------------
Confidence 99999999999986 565 69999999887654433333222
Q ss_pred CchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEe
Q 019876 247 TDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKT 312 (334)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~ 312 (334)
+.+.+ .+.||+|++++.+++|. + +++++++|.+.++
T Consensus 200 ------------------l~~~l---------~~~GV~i~~~~~v~~i~--~-~~~~v~~v~l~dG 235 (415)
T 3lxd_A 200 ------------------YQAEH---------RAHGVDLRTGAAMDCIE--G-DGTKVTGVRMQDG 235 (415)
T ss_dssp ------------------HHHHH---------HHTTCEEEETCCEEEEE--E-SSSBEEEEEESSS
T ss_pred ------------------HHHHH---------HhCCCEEEECCEEEEEE--e-cCCcEEEEEeCCC
Confidence 22222 25699999999999998 5 3578888988654
No 9
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.89 E-value=1.3e-23 Score=200.57 Aligned_cols=213 Identities=17% Similarity=0.207 Sum_probs=143.7
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc---cccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---VRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~---~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
++|+|||||+||++||.+|++.++..+|+|||+++.++.. +...+..+......+ ....+++.+.+++++.++.+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~~~v~ 81 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARIDMLTGPEVT 81 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCEEEESCCEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCEEEeCCEEE
Confidence 5899999999999999999999866679999998764321 110010110001111 122344566799999885442
Q ss_pred ------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCH
Q 019876 97 ------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGN 169 (334)
Q Consensus 97 ------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~ 169 (334)
..+.+.++ .+.||+||||||+ .|+.|++||.+.+++++.+++..... +...+..+++|+|||+|+
T Consensus 82 ~id~~~~~v~~~~g~~~~~d~lvlAtG~-~p~~~~ipG~~~~~v~~~~~~~d~~~-------l~~~~~~~~~vvViGgG~ 153 (410)
T 3ef6_A 82 ALDVQTRTISLDDGTTLSADAIVIATGS-RARTMALPGSQLPGVVTLRTYGDVQV-------LRDSWTSATRLLIVGGGL 153 (410)
T ss_dssp EEETTTTEEEETTSCEEECSEEEECCCE-EECCCCCTTTTSTTEECCCSHHHHHH-------HHHHCCTTCEEEEECCSH
T ss_pred EEECCCCEEEECCCCEEECCEEEEccCC-cccCCCCCCccccceEEeccHHHHHH-------HHHHhccCCeEEEECCCH
Confidence 24555544 4689999999999 59999999988888876544432111 000123689999999999
Q ss_pred HHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCch
Q 019876 170 VALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDE 249 (334)
Q Consensus 170 ~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~ 249 (334)
+|+|+|..|.+ .|. +||++++.+.++....+++
T Consensus 154 ~g~E~A~~l~~--------------------~g~-~Vtvv~~~~~~l~~~~~~~-------------------------- 186 (410)
T 3ef6_A 154 IGCEVATTARK--------------------LGL-SVTILEAGDELLVRVLGRR-------------------------- 186 (410)
T ss_dssp HHHHHHHHHHH--------------------TTC-EEEEECSSSSSSHHHHCHH--------------------------
T ss_pred HHHHHHHHHHh--------------------CCC-eEEEEecCCccchhhcCHH--------------------------
Confidence 99999999986 565 6999999887642211111
Q ss_pred hhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEe
Q 019876 250 EEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKT 312 (334)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~ 312 (334)
..+.+.+.+. +.||+|++++.+++|. + ++++.+|.+.++
T Consensus 187 -----------~~~~l~~~l~---------~~GV~i~~~~~v~~i~--~--~~~~~~v~~~dg 225 (410)
T 3ef6_A 187 -----------IGAWLRGLLT---------ELGVQVELGTGVVGFS--G--EGQLEQVMASDG 225 (410)
T ss_dssp -----------HHHHHHHHHH---------HHTCEEECSCCEEEEE--C--SSSCCEEEETTS
T ss_pred -----------HHHHHHHHHH---------HCCCEEEeCCEEEEEe--c--cCcEEEEEECCC
Confidence 1223333332 5699999999999998 5 457778887543
No 10
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.88 E-value=5.5e-23 Score=195.85 Aligned_cols=216 Identities=17% Similarity=0.190 Sum_probs=145.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc-ccc--ccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF-GLV--RSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g-g~~--~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
+++|+|||||+||++||.+|++.+++.+|+|||+++... ... ......+.....++.....+++.+.+++++.....
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~v~ 80 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQAIELISDRMV 80 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTTEEEECCCEE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCCCEEEEEEEE
Confidence 368999999999999999999998555999999987542 211 10111111111222223345566778998873322
Q ss_pred c-----eEEecccc-eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCH
Q 019876 96 G-----SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGN 169 (334)
Q Consensus 96 ~-----~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~ 169 (334)
. ..+.+.++ ...||+||+|||+ .|+.|++||.+.+++++.+........ ...+..+++++|||+|+
T Consensus 81 ~id~~~~~v~~~~g~~~~~d~lvlAtG~-~p~~~~i~g~~~~~v~~~~~~~d~~~l-------~~~~~~~~~vvViGgG~ 152 (404)
T 3fg2_P 81 SIDREGRKLLLASGTAIEYGHLVLATGA-RNRMLDVPNASLPDVLYLRTLDESEVL-------RQRMPDKKHVVVIGAGF 152 (404)
T ss_dssp EEETTTTEEEESSSCEEECSEEEECCCE-EECCCCSTTTTSTTEECCSSHHHHHHH-------HHHGGGCSEEEEECCSH
T ss_pred EEECCCCEEEECCCCEEECCEEEEeeCC-CccCCCCCCCCCCcEEEECCHHHHHHH-------HHHhhcCCeEEEECCCH
Confidence 1 24555554 4689999999999 699999999888888865443321100 00122579999999999
Q ss_pred HHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCch
Q 019876 170 VALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDE 249 (334)
Q Consensus 170 ~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~ 249 (334)
+|+|+|..|.+ .+. +|+++++.+.++....++++.+
T Consensus 153 ~g~e~A~~l~~--------------------~g~-~Vtvv~~~~~~~~~~~~~~~~~----------------------- 188 (404)
T 3fg2_P 153 IGLEFAATARA--------------------KGL-EVDVVELAPRVMARVVTPEISS----------------------- 188 (404)
T ss_dssp HHHHHHHHHHH--------------------TTC-EEEEECSSSSTTTTTSCHHHHH-----------------------
T ss_pred HHHHHHHHHHh--------------------CCC-EEEEEeCCCcchhhccCHHHHH-----------------------
Confidence 99999999986 565 6999999987764433333322
Q ss_pred hhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEEe
Q 019876 250 EEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEKT 312 (334)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~~ 312 (334)
.+.+.+ .+.||+|++++.+++|. + +++++.+|.+.++
T Consensus 189 --------------~l~~~l---------~~~GV~i~~~~~v~~i~--~-~~~~v~~V~~~dG 225 (404)
T 3fg2_P 189 --------------YFHDRH---------SGAGIRMHYGVRATEIA--A-EGDRVTGVVLSDG 225 (404)
T ss_dssp --------------HHHHHH---------HHTTCEEECSCCEEEEE--E-ETTEEEEEEETTS
T ss_pred --------------HHHHHH---------HhCCcEEEECCEEEEEE--e-cCCcEEEEEeCCC
Confidence 222222 25689999999999998 5 3578888888654
No 11
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.88 E-value=9.5e-22 Score=179.71 Aligned_cols=199 Identities=19% Similarity=0.282 Sum_probs=143.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEE-EcCCCCCccccccc----cCCCCc---chhHHHHHHHHHhhcCCcEE
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDI-IDRLPTPFGLVRSG----VAPDHP---ETKIVINQFSRVVQHERCSF 89 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~v-ie~~~~~gg~~~~~----~~p~~~---~~~~~~~~~~~~~~~~~i~~ 89 (334)
.+++|+|||||+||++||.+|++.+ .+|+| +|+ +.+||.+.+. .+|.+. ...++..++.+++.+.++++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~li~e~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGG--LKNVVMFEK-GMPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKH 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHT--CSCEEEECS-SSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCC--CCeEEEEeC-CCCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEE
Confidence 4579999999999999999999987 99999 999 5677776441 124433 45678888899999999999
Q ss_pred EeCeEEce--------E--EecccceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCC
Q 019876 90 FGNVTLGS--------S--VSLSELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDL 156 (334)
Q Consensus 90 ~~~~~v~~--------~--v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (334)
+.+..+.. . +..++ ...||+||+|||+ .|+.|++||.+. .+++....... . .
T Consensus 80 ~~~~v~~i~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~-~------------~ 144 (315)
T 3r9u_A 80 EMVGVEQILKNSDGSFTIKLEGGK-TELAKAVIVCTGS-APKKAGFKGEDEFFGKGVSTCATCDG-F------------F 144 (315)
T ss_dssp ECCCEEEEEECTTSCEEEEETTSC-EEEEEEEEECCCE-EECCCCCBTTTTTBTTTEESCHHHHG-G------------G
T ss_pred EEEEEEEEecCCCCcEEEEEecCC-EEEeCEEEEeeCC-CCCCCCCCChhhcCCCeEEeeecccc-c------------c
Confidence 88754332 1 22223 5689999999999 688889999764 44444322211 0 1
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEE
Q 019876 157 KSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (334)
Q Consensus 157 ~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~ 236 (334)
..+++++|||+|.+|+|+|..|.+ .+ .+|++++|++.+. .....
T Consensus 145 ~~~~~v~viG~g~~~~e~a~~l~~--------------------~g-~~v~~~~~~~~~~--~~~~~------------- 188 (315)
T 3r9u_A 145 YKNKEVAVLGGGDTALEEALYLAN--------------------IC-SKIYLIHRRDEFR--AAPST------------- 188 (315)
T ss_dssp GTTSEEEEECCBHHHHHHHHHHHT--------------------TS-SEEEEECSSSSCB--SCHHH-------------
T ss_pred cCcCEEEEECCCHHHHHHHHHHHh--------------------hC-CEEEEEEeCCCCC--CCHHH-------------
Confidence 257999999999999999999996 55 4699999987652 11111
Q ss_pred EccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEE
Q 019876 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (334)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~ 310 (334)
+++.+ .+.||+|++++.+++|. . +++++.+|.+.
T Consensus 189 ----------------------------~~~~~---------~~~gv~~~~~~~v~~i~--~-~~~~~~~v~~~ 222 (315)
T 3r9u_A 189 ----------------------------VEKVK---------KNEKIELITSASVDEVY--G-DKMGVAGVKVK 222 (315)
T ss_dssp ----------------------------HHHHH---------HCTTEEEECSCEEEEEE--E-ETTEEEEEEEE
T ss_pred ----------------------------HHHHH---------hcCCeEEEeCcEEEEEE--c-CCCcEEEEEEE
Confidence 11111 15689999999999997 5 35678888887
No 12
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.88 E-value=2.6e-22 Score=193.69 Aligned_cols=170 Identities=18% Similarity=0.192 Sum_probs=114.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc---CCCCcchhHHHHHHHHHh-hcCCcEEEeCeE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDHPETKIVINQFSRVV-QHERCSFFGNVT 94 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~---~p~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 94 (334)
+++|+|||||+||+++|..|++.+++.+|+|||+++..+... .++ .++.....++..+..+.+ ++.+++++.++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~ 81 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP-CGIPYVVEGLSTPDKLMYYPPEVFIKKRGIDLHLNAE 81 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-------------------------CTHHHHTTCEEETTCE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC-cCCccccCCCCCHHHhhhcCHHHHHHhcCcEEEecCE
Confidence 579999999999999999999987679999999988654221 111 111122233333333334 577999998865
Q ss_pred Ec------eEEecccc--eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHH--hcCCCCCCCCCCCCCCCCeEEE
Q 019876 95 LG------SSVSLSEL--RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKSTDTAVI 164 (334)
Q Consensus 95 v~------~~v~~~~~--~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~k~vvV 164 (334)
+. ..+...+. ...||+||||||+ .|+.|++||.+.+++++....... ....+. -..+++++|
T Consensus 82 v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~-------~~~~~~vvV 153 (449)
T 3kd9_A 82 VIEVDTGYVRVRENGGEKSYEWDYLVFANGA-SPQVPAIEGVNLKGVFTADLPPDALAIREYME-------KYKVENVVI 153 (449)
T ss_dssp EEEECSSEEEEECSSSEEEEECSEEEECCCE-EECCCSCBTTTSTTEECSCSTHHHHHHHHHHS-------SSCCCEEEE
T ss_pred EEEEecCCCEEEECCceEEEEcCEEEECCCC-CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH-------hcCCCeEEE
Confidence 42 23444443 4689999999999 589999999887777755332211 111100 015789999
Q ss_pred EcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccC
Q 019876 165 LGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAA 218 (334)
Q Consensus 165 IG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~ 218 (334)
||+|++|+|+|..|++ .|. +|++++|+++++..
T Consensus 154 iGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 154 IGGGYIGIEMAEAFAA--------------------QGK-NVTMIVRGERVLRR 186 (449)
T ss_dssp ECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSSSTTTT
T ss_pred ECCCHHHHHHHHHHHh--------------------CCC-eEEEEEcCCccchh
Confidence 9999999999999986 565 69999999887655
No 13
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.88 E-value=1.1e-21 Score=181.20 Aligned_cols=205 Identities=15% Similarity=0.236 Sum_probs=145.7
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC----CCcccccccc----CCC---CcchhHHHHHHHHHhhcC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP----TPFGLVRSGV----APD---HPETKIVINQFSRVVQHE 85 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~----~~gg~~~~~~----~p~---~~~~~~~~~~~~~~~~~~ 85 (334)
..+++|+|||||++|+++|..|++.+ ++|+|||+.+ .+||.+.+.. +|. .....++..++.+.+.+.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAE--IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKF 97 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHc
Confidence 35689999999999999999999997 9999999954 6788776421 233 334567888888888999
Q ss_pred CcEEEeCeEEce-------EEec----ccceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCC
Q 019876 86 RCSFFGNVTLGS-------SVSL----SELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKN 151 (334)
Q Consensus 86 ~i~~~~~~~v~~-------~v~~----~~~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~ 151 (334)
+++++.++.+.. .+.. ......||+||+|||+ .|+.|++||.+. .++....... ...
T Consensus 98 gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~-~~~~~~~~g~~~~~~~~~~~~~~~~----~~~---- 168 (338)
T 3itj_A 98 GTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA-SAKRMHLPGEETYWQKGISACAVCD----GAV---- 168 (338)
T ss_dssp TCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE-EECCCCCTTHHHHBTTTEESCHHHH----TTS----
T ss_pred CCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC-CcCCCCCCCchhccCccEEEchhcc----cch----
Confidence 999998874321 1222 2234689999999999 588889998642 3333332111 100
Q ss_pred CCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCC
Q 019876 152 LSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIK 231 (334)
Q Consensus 152 ~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~ 231 (334)
....+++|+|||+|.+|+|+|..|.+ .+. +|++++|++.+.. . +
T Consensus 169 ---~~~~~~~v~vvG~G~~g~e~a~~l~~--------------------~g~-~v~~v~~~~~~~~--~-~--------- 212 (338)
T 3itj_A 169 ---PIFRNKPLAVIGGGDSACEEAQFLTK--------------------YGS-KVFMLVRKDHLRA--S-T--------- 212 (338)
T ss_dssp ---GGGTTSEEEEECSSHHHHHHHHHHTT--------------------TSS-EEEEECSSSSCCS--C-H---------
T ss_pred ---hhcCCCEEEEECCCHHHHHHHHHHHh--------------------cCC-EEEEEEcCCccCC--C-H---------
Confidence 02367999999999999999999996 554 6999999876531 0 0
Q ss_pred ceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 232 NLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 232 gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
.+.+.+. ...||+|++++.+++|. + +++++.+|.+.+
T Consensus 213 --------------------------------~~~~~l~--------~~~gv~i~~~~~v~~i~--~-~~~~~~~v~~~~ 249 (338)
T 3itj_A 213 --------------------------------IMQKRAE--------KNEKIEILYNTVALEAK--G-DGKLLNALRIKN 249 (338)
T ss_dssp --------------------------------HHHHHHH--------HCTTEEEECSEEEEEEE--E-SSSSEEEEEEEE
T ss_pred --------------------------------HHHHHHH--------hcCCeEEeecceeEEEE--c-ccCcEEEEEEEE
Confidence 0111111 13489999999999998 5 356788898876
No 14
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.88 E-value=3.9e-22 Score=194.68 Aligned_cols=183 Identities=14% Similarity=0.164 Sum_probs=120.4
Q ss_pred ccccccccccc-CC--CCCCeEEEECCchHHHHHHHHHhhcC-CCCeEEEEcCCCCCcccccccc---CCCC-cchhHHH
Q 019876 4 ARAWLSRSFTA-LS--SNPLRVCVVGSGPAGFYTAEKTLKAH-QEAQVDIIDRLPTPFGLVRSGV---APDH-PETKIVI 75 (334)
Q Consensus 4 ~~~~~~~~~~~-~~--~~~~~vvIIGaG~aGl~aA~~l~~~~-~~~~v~vie~~~~~gg~~~~~~---~p~~-~~~~~~~ 75 (334)
+.+|+++.+.. +. ...++|+|||||+||+++|..|++.+ ++.+|+|||+++..+... .++ .... ....++.
T Consensus 17 ~~~~~~~~~~~~m~~~~m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 95 (490)
T 2bc0_A 17 GGQQMGRTLYDDDDKDRWGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLG-AGMALWIGEQIAGPEGLF 95 (490)
T ss_dssp -CCCCSCCTTCCCCTTCCCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCG-GGHHHHHTTSSSCSGGGB
T ss_pred chhhhccccccccchhccCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccc-cccchhhcCccCCHHHhh
Confidence 34566665322 11 12479999999999999999999986 569999999987543211 010 0000 1112222
Q ss_pred HHHHHHhhcCCcEEEeCeEEc------eEEecc-c---ceeccCeEEEeccCCCCCCCCCCCcc-----------CCCcc
Q 019876 76 NQFSRVVQHERCSFFGNVTLG------SSVSLS-E---LRQLYHVVVLAYGAESDRALGIPGED-----------LIGVH 134 (334)
Q Consensus 76 ~~~~~~~~~~~i~~~~~~~v~------~~v~~~-~---~~~~yd~lIlATGs~~p~~~~ipG~~-----------~~~v~ 134 (334)
....+.+++.+++++.+..+. ..+.+. + ..+.||+||||||+ .|+.|++||.+ .++++
T Consensus 96 ~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~~~~~f~~~~~~v~ 174 (490)
T 2bc0_A 96 YSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGS-QPILPPIKGAEIKEGSLEFEATLENLQ 174 (490)
T ss_dssp SCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCE-EECCCSCBTCCBCTTCTTCCBSSTTEE
T ss_pred hcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCC-CcCCCCCCCccccccccccccccCCEE
Confidence 222344556789987776432 234443 2 24689999999999 58888999987 56777
Q ss_pred chhhHHHH---hcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEee
Q 019876 135 SAREFVWW---YNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGR 211 (334)
Q Consensus 135 ~~~~~~~~---~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r 211 (334)
+.+.+... ..... -..+++|+|||+|++|+|+|..|++ .|. +||+++|
T Consensus 175 ~~~~~~~~~~~~~~~~--------~~~~~~vvVIGgG~ig~E~A~~l~~--------------------~g~-~Vtlv~~ 225 (490)
T 2bc0_A 175 FVKLYQNSADVIAKLE--------NKDIKRVAVVGAGYIGVELAEAFQR--------------------KGK-EVVLIDV 225 (490)
T ss_dssp ECSSHHHHHHHHHHTT--------STTCCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEES
T ss_pred EeCCHHHHHHHHHHhh--------hcCCceEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEEc
Confidence 65433211 11000 0257999999999999999999986 565 6999999
Q ss_pred cCcccc
Q 019876 212 RGPVQA 217 (334)
Q Consensus 212 ~~~~~~ 217 (334)
++.++.
T Consensus 226 ~~~~l~ 231 (490)
T 2bc0_A 226 VDTCLA 231 (490)
T ss_dssp SSSTTT
T ss_pred ccchhh
Confidence 988765
No 15
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.88 E-value=3.7e-23 Score=195.90 Aligned_cols=191 Identities=14% Similarity=0.159 Sum_probs=136.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc-cccc-ccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG-LVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg-~~~~-~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
+..||+|||||+||++||..|... +.+|+|||+++.++. .... ...++.....++..+..+++++.+++++.++.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~--~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~~~~~V 85 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK--CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFA 85 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT--CSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEECSCCE
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC--CCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEEeCCEE
Confidence 467999999999999999999444 599999999876531 1110 011222223344444556677789999988654
Q ss_pred c------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCC
Q 019876 96 G------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQG 168 (334)
Q Consensus 96 ~------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G 168 (334)
. +.+.+.++ .+.||+||||||+ .|+.|++||.+ ++++.+++...... ...+..+++|+|||+|
T Consensus 86 ~~id~~~~~v~~~~g~~~~yd~lvlAtG~-~p~~p~i~G~~--~v~~~~~~~d~~~l-------~~~l~~~~~vvVIGgG 155 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGEKIKYEKLIIASGS-IANKIKVPHAD--EIFSLYSYDDALKI-------KDECKNKGKAFIIGGG 155 (385)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCE-EECCCCCTTCS--CEECCSSHHHHHHH-------HHHHHHHSCEEEECCS
T ss_pred EEEECCCCEEEECCCCEEECCEEEEecCC-CcCCCCCCCCC--CeEEeCCHHHHHHH-------HHHhhcCCeEEEECCC
Confidence 2 24555555 4689999999999 69999999987 77765444321110 0001136899999999
Q ss_pred HHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccC-CCH---HHHHHHHcCCceEEEEccCc
Q 019876 169 NVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAA-CTA---KELREILGIKNLYVHIREDD 241 (334)
Q Consensus 169 ~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~-~~~---~~~~~~l~~~gv~~~~~~~~ 241 (334)
++|+|+|..|++ .|. +||++++++.++.. +++ +.+.+.++..||+++.+...
T Consensus 156 ~~g~E~A~~l~~--------------------~g~-~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~~~v 211 (385)
T 3klj_A 156 ILGIELAQAIID--------------------SGT-PASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNF 211 (385)
T ss_dssp HHHHHHHHHHHH--------------------HTC-CEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECSCCG
T ss_pred HHHHHHHHHHHh--------------------CCC-eEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 999999999986 565 69999999988876 444 45677788899999987544
No 16
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.88 E-value=7.3e-22 Score=194.25 Aligned_cols=168 Identities=19% Similarity=0.263 Sum_probs=121.1
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCC------------------------cc-
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH------------------------PE- 70 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~------------------------~~- 70 (334)
...++|+|||||++|++||.+|++.+ .+|+|||+++.+||.+.+ ++.|.+ ..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~ 118 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMG--GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEK 118 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhh
Confidence 34689999999999999999999997 999999999867776543 332221 11
Q ss_pred ---hhHHHHHHH-------HHh-----hcCCcEEE-eCeEE---ceEEecccceeccCeEEEeccCCCCCCCCCCCccCC
Q 019876 71 ---TKIVINQFS-------RVV-----QHERCSFF-GNVTL---GSSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLI 131 (334)
Q Consensus 71 ---~~~~~~~~~-------~~~-----~~~~i~~~-~~~~v---~~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~ 131 (334)
..++..++. .++ ++.+++++ .+... ...+.+....+.||+||+|||+ .|..|++||.+.+
T Consensus 119 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g~~~~~d~lViATGs-~p~~p~i~G~~~~ 197 (523)
T 1mo9_A 119 VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGA-GPGTLDVPGVNAK 197 (523)
T ss_dssp CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETTEEEEBSCEEECCCE-ECCCCCSTTTTSB
T ss_pred hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECCEEEEeCEEEECCCC-CCCCCCCCCcccC
Confidence 223333332 445 67789887 44321 1234444334689999999999 5899999998877
Q ss_pred CccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEee
Q 019876 132 GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGR 211 (334)
Q Consensus 132 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r 211 (334)
++++..++...+.. . .+++++|||+|++|+|+|..|.+ .|. +|+++++
T Consensus 198 ~v~~~~~~~~~l~~----------~-~g~~vvViGgG~~g~E~A~~l~~--------------------~G~-~Vtlv~~ 245 (523)
T 1mo9_A 198 GVFDHATLVEELDY----------E-PGSTVVVVGGSKTAVEYGCFFNA--------------------TGR-RTVMLVR 245 (523)
T ss_dssp TEEEHHHHHHHCCS----------C-CCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECS
T ss_pred cEeeHHHHHHHHHh----------c-CCCeEEEECCCHHHHHHHHHHHH--------------------cCC-eEEEEEe
Confidence 88877766522211 1 34999999999999999999986 675 6999999
Q ss_pred cCccccCC
Q 019876 212 RGPVQAAC 219 (334)
Q Consensus 212 ~~~~~~~~ 219 (334)
.+.++..+
T Consensus 246 ~~~~l~~~ 253 (523)
T 1mo9_A 246 TEPLKLIK 253 (523)
T ss_dssp SCTTTTCC
T ss_pred cCcccccc
Confidence 98776544
No 17
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.87 E-value=6.9e-22 Score=191.73 Aligned_cols=165 Identities=16% Similarity=0.224 Sum_probs=119.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc----------------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP---------------------------- 69 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~---------------------------- 69 (334)
.++|+|||||+||++||..|++.+ .+|+|||+++.+||.|.+ ++.|.+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLG--MKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 468999999999999999999997 999999999888876532 3333211
Q ss_pred chhHH-----------HHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCCCCCCccC
Q 019876 70 ETKIV-----------INQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGEDL 130 (334)
Q Consensus 70 ~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~~ipG~~~ 130 (334)
....+ ...+..++++.+++++.++.+. ..+...++ .+.||+||+|||+ .|..|+++|.+.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~-~p~~p~~~g~~~ 158 (468)
T 2qae_A 80 DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGS-EPTELPFLPFDE 158 (468)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCE-EECCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCC-CcCCCCCCCCCc
Confidence 01111 1122455566789988776542 12333333 4689999999999 588888999876
Q ss_pred CCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEe
Q 019876 131 IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVG 210 (334)
Q Consensus 131 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~ 210 (334)
+++++..++.. .. ..+++++|||+|++|+|+|..|.+ .|. +|++++
T Consensus 159 ~~v~t~~~~~~----~~---------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~ 204 (468)
T 2qae_A 159 KVVLSSTGALA----LP---------RVPKTMVVIGGGVIGLELGSVWAR--------------------LGA-EVTVVE 204 (468)
T ss_dssp SSEECHHHHHT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEC
T ss_pred CceechHHHhh----cc---------cCCceEEEECCCHHHHHHHHHHHH--------------------hCC-EEEEEe
Confidence 67877765542 11 146899999999999999999986 565 699999
Q ss_pred ecCccccCCC
Q 019876 211 RRGPVQAACT 220 (334)
Q Consensus 211 r~~~~~~~~~ 220 (334)
|++.++..++
T Consensus 205 ~~~~~l~~~d 214 (468)
T 2qae_A 205 FAPRCAPTLD 214 (468)
T ss_dssp SSSSSSTTSC
T ss_pred cCCcccccCC
Confidence 9988765443
No 18
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.87 E-value=8.7e-22 Score=190.99 Aligned_cols=162 Identities=23% Similarity=0.290 Sum_probs=115.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-cc------------------CCCC---------c
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GV------------------APDH---------P 69 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~------------------~p~~---------~ 69 (334)
..++|+|||||++|+++|..|++.+ .+|+|||++ .+||.|.+ ++ .|.+ .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQG--AQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 3579999999999999999999987 999999998 56665422 21 1111 0
Q ss_pred chhHHH-------HH-----HHHHhhcC-CcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCCCCCCc
Q 019876 70 ETKIVI-------NQ-----FSRVVQHE-RCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGE 128 (334)
Q Consensus 70 ~~~~~~-------~~-----~~~~~~~~-~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~~ipG~ 128 (334)
....+. .+ +.+++++. +++++.+.... ..+...++ .+.||+||||||+ .|+.|++||.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs-~p~~p~i~G~ 158 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGA-SPAVPPIPGL 158 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCE-EECCCCCTTT
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCC-CCCCCCCCCC
Confidence 111121 11 23455666 89988765321 12333333 4689999999999 6999999998
Q ss_pred cCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEE
Q 019876 129 DLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYL 208 (334)
Q Consensus 129 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vti 208 (334)
+..++++..++... . ..+++|+|||+|++|+|+|..|++ .|. +|++
T Consensus 159 ~~~~~~~~~~~~~~-~------------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g~-~Vtl 204 (467)
T 1zk7_A 159 KESPYWTSTEALAS-D------------TIPERLAVIGSSVVALELAQAFAR--------------------LGS-KVTV 204 (467)
T ss_dssp TTSCCBCHHHHHHC-S------------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEE
T ss_pred CcCceecHHHHhcc-c------------ccCCEEEEECCCHHHHHHHHHHHH--------------------cCC-EEEE
Confidence 76667766655421 0 146899999999999999999986 565 6999
Q ss_pred EeecCcccc
Q 019876 209 VGRRGPVQA 217 (334)
Q Consensus 209 v~r~~~~~~ 217 (334)
++|++.++.
T Consensus 205 v~~~~~~l~ 213 (467)
T 1zk7_A 205 LARNTLFFR 213 (467)
T ss_dssp ECSSCTTTT
T ss_pred EEECCccCC
Confidence 999987764
No 19
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.87 E-value=4e-22 Score=192.31 Aligned_cols=211 Identities=18% Similarity=0.284 Sum_probs=139.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc---CCC-CcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APD-HPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~---~p~-~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
|+|+|||||+||++||..|++.+++.+|+|||+++..+. ...++ ..+ ....+++..+..+.+++.+++++.+..+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISF-LSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVFSNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSB-CGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEEETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCc-ccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEEECCEE
Confidence 589999999999999999999855699999999876531 11111 001 0112222223344556678998777665
Q ss_pred c------eEEeccc---c---eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCC--CCCe
Q 019876 96 G------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLK--STDT 161 (334)
Q Consensus 96 ~------~~v~~~~---~---~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~k~ 161 (334)
. ..+.+.+ + ++.||+||||||+ .|..|++||.+.+++++..++....... ..+. .+++
T Consensus 80 ~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~l~-------~~~~~~~~~~ 151 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLVSGEERVENYDKLIISPGA-VPFELDIPGKDLDNIYLMRGRQWAIKLK-------QKTVDPEVNN 151 (447)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCSTTTTSBSEECCCHHHHHHHHH-------HHHTCTTCCE
T ss_pred EEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCC-CcCCCCCCCCCCCCeEEECCHHHHHHHH-------HHhhhcCCCe
Confidence 2 2344432 2 2689999999999 5888999998877888765543211000 0011 5689
Q ss_pred EEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCc
Q 019876 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDD 241 (334)
Q Consensus 162 vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~ 241 (334)
++|||+|++|+|+|..|++ .|. +|+++++.+.++..+.++++.
T Consensus 152 vvIiG~G~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~~~~~~~~---------------- 194 (447)
T 1nhp_A 152 VVVIGSGYIGIEAAEAFAK--------------------AGK-KVTVIDILDRPLGVYLDKEFT---------------- 194 (447)
T ss_dssp EEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSSSTTTTTCCHHHH----------------
T ss_pred EEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEecCcccccccCCHHHH----------------
Confidence 9999999999999999986 565 699999998775432222221
Q ss_pred cCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEE
Q 019876 242 LIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (334)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~ 310 (334)
+.+.+.+. +.||+|++++.+++|. + ++++..|.+.
T Consensus 195 ---------------------~~l~~~l~---------~~gv~i~~~~~v~~i~--~--~~~v~~v~~~ 229 (447)
T 1nhp_A 195 ---------------------DVLTEEME---------ANNITIATGETVERYE--G--DGRVQKVVTD 229 (447)
T ss_dssp ---------------------HHHHHHHH---------TTTEEEEESCCEEEEE--C--SSBCCEEEES
T ss_pred ---------------------HHHHHHHH---------hCCCEEEcCCEEEEEE--c--cCcEEEEEEC
Confidence 22233332 5689999999999987 5 3555555553
No 20
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.87 E-value=5.2e-21 Score=175.23 Aligned_cols=198 Identities=22% Similarity=0.278 Sum_probs=142.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc----cCCCCc--chhHHHHHHHHHhhcCCcEEEeC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDHP--ETKIVINQFSRVVQHERCSFFGN 92 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~----~~p~~~--~~~~~~~~~~~~~~~~~i~~~~~ 92 (334)
.++|+|||||++|+++|..|++.+ .+|+|||++ +||.+.+. ..|.+. ...++..++.+.+.+.+++++..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYM--LKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLD 90 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEES
T ss_pred ccCEEEECccHHHHHHHHHHHHCC--CcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEE
Confidence 469999999999999999999997 999999998 77777541 113332 34578888888888889998874
Q ss_pred eEEce-------EEeccc-ceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCCCCe
Q 019876 93 VTLGS-------SVSLSE-LRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDT 161 (334)
Q Consensus 93 ~~v~~-------~v~~~~-~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 161 (334)
..... .+...+ ..+.||+||+|||+. |..|++||.+. ++++... .... ....+++
T Consensus 91 ~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~-~~~~~i~g~~~~~~~~~~~~~-~~~~------------~~~~~~~ 156 (323)
T 3f8d_A 91 IVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK-RRKLGVPGEQEFAGRGISYCS-VADA------------PLFKNRV 156 (323)
T ss_dssp CEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE-ECCCCCTTTTTTBTTTEESCH-HHHG------------GGGTTCE
T ss_pred EEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC-CccCCCCchhhhcCCceEEec-cCCH------------hHcCCCE
Confidence 43321 234444 346899999999994 88889999764 4553321 1110 0125799
Q ss_pred EEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCc
Q 019876 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDD 241 (334)
Q Consensus 162 vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~ 241 (334)
|+|||+|.+|+|+|..|.+ .+. +|++++|++.+.. .+.
T Consensus 157 v~vvG~G~~~~e~a~~l~~--------------------~g~-~v~~~~~~~~~~~--~~~------------------- 194 (323)
T 3f8d_A 157 VAVIGGGDSALEGAEILSS--------------------YST-KVYLIHRRDTFKA--QPI------------------- 194 (323)
T ss_dssp EEEECCSHHHHHHHHHHHH--------------------HSS-EEEEECSSSSCCS--CHH-------------------
T ss_pred EEEECCCHHHHHHHHHHHH--------------------hCC-eEEEEEeCCCCCc--CHH-------------------
Confidence 9999999999999999986 454 6999999876532 110
Q ss_pred cCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 242 LIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
.+++.. ...||+|++++.+++|. + ++++.+|.+.+
T Consensus 195 ----------------------~~~~~~---------~~~gv~~~~~~~v~~i~--~--~~~~~~v~~~~ 229 (323)
T 3f8d_A 195 ----------------------YVETVK---------KKPNVEFVLNSVVKEIK--G--DKVVKQVVVEN 229 (323)
T ss_dssp ----------------------HHHHHH---------TCTTEEEECSEEEEEEE--E--SSSEEEEEEEE
T ss_pred ----------------------HHHHHH---------hCCCcEEEeCCEEEEEe--c--cCceeEEEEEE
Confidence 111111 24589999999999998 5 46788888876
No 21
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.87 E-value=7.2e-22 Score=191.92 Aligned_cols=162 Identities=17% Similarity=0.180 Sum_probs=118.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCcc---------------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPE--------------------------- 70 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~--------------------------- 70 (334)
.++|+||||||||++||..|++.+ .+|+|||+++.+||.|.+ ++.|.+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~ 83 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLG--FKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRL 83 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCcc
Confidence 478999999999999999999997 999999999888876543 33332110
Q ss_pred -hhHH-----------HHHHHHHhhcCCcEEEeCeEEc-----eEEeccc---ceeccCeEEEeccCCCCCCCCCCCccC
Q 019876 71 -TKIV-----------INQFSRVVQHERCSFFGNVTLG-----SSVSLSE---LRQLYHVVVLAYGAESDRALGIPGEDL 130 (334)
Q Consensus 71 -~~~~-----------~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~---~~~~yd~lIlATGs~~p~~~~ipG~~~ 130 (334)
...+ ...+.+++++.+++++.+..+. ..+...+ ..+.||+||+|||+ .|..|+++|.+.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs-~p~~p~i~g~~~ 162 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGS-EVTPFPGITIDE 162 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCE-EECCCTTCCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCC-CCCCCCCCCCCc
Confidence 1111 1122455667789998886542 1233333 24689999999999 588889999876
Q ss_pred CCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEe
Q 019876 131 IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVG 210 (334)
Q Consensus 131 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~ 210 (334)
.++++..++.. .. ..+++|+|||+|++|+|+|..|++ .|. +|++++
T Consensus 163 ~~v~t~~~~~~----~~---------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~ 208 (474)
T 1zmd_A 163 DTIVSSTGALS----LK---------KVPEKMVVIGAGVIGVELGSVWQR--------------------LGA-DVTAVE 208 (474)
T ss_dssp SSEECHHHHTT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEC
T ss_pred CcEEcHHHHhh----cc---------ccCceEEEECCCHHHHHHHHHHHH--------------------cCC-EEEEEe
Confidence 66776655431 11 136899999999999999999986 675 699999
Q ss_pred ecCcccc
Q 019876 211 RRGPVQA 217 (334)
Q Consensus 211 r~~~~~~ 217 (334)
+++.++.
T Consensus 209 ~~~~~l~ 215 (474)
T 1zmd_A 209 FLGHVGG 215 (474)
T ss_dssp SSSSSSC
T ss_pred ccCccCC
Confidence 9988765
No 22
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.87 E-value=1e-20 Score=174.34 Aligned_cols=199 Identities=22% Similarity=0.286 Sum_probs=139.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc----cCCCC---cchhHHHHHHHHHhhcCCcEEEe
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSFFG 91 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~----~~p~~---~~~~~~~~~~~~~~~~~~i~~~~ 91 (334)
.++|+||||||+|+++|..|++.+ .+|+|||+. .+||.+.+. ..|.+ ....++..++.+.+++.+++++.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~ 84 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQ--LSTLILEKG-MPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM 84 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHcC--CcEEEEeCC-CCCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 478999999999999999999987 999999998 577766531 12333 23456777788888888999877
Q ss_pred CeEEce----------EEeccc-ceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCC
Q 019876 92 NVTLGS----------SVSLSE-LRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLK 157 (334)
Q Consensus 92 ~~~v~~----------~v~~~~-~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~ 157 (334)
+..... .+...+ ..+.||+||+|||+ .|..|++||.+. .+++....... . ..
T Consensus 85 ~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~-~~~~~~i~g~~~~~~~~~~~~~~~~~----~---------~~ 150 (325)
T 2q7v_A 85 DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA-DPRKLGIPGEDNFWGKGVSTCATCDG----F---------FY 150 (325)
T ss_dssp CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE-EECCCCCTTTTTTBTTTEESCHHHHG----G---------GG
T ss_pred eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC-CcCCCCCCChhhccCceEEEeccCCH----H---------Hc
Confidence 543321 122222 23689999999999 588888998752 33433221111 0 12
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEE
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHI 237 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~ 237 (334)
.+++|+|||+|.+|+|+|..|++ .+ .+|++++|++.+. ..+.
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~~--~~~~--------------- 192 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTK--------------------FA-DEVTVIHRRDTLR--ANKV--------------- 192 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTT--------------------TC-SEEEEECSSSSCC--SCHH---------------
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--------------------cC-CEEEEEeCCCcCC--cchH---------------
Confidence 57999999999999999999986 55 4799999987542 1110
Q ss_pred ccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 238 REDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
+.+.+. ...||+|++++.+++|. + ++++.+|.+.+
T Consensus 193 ---------------------------~~~~l~--------~~~gv~i~~~~~v~~i~--~--~~~v~~v~~~~ 227 (325)
T 2q7v_A 193 ---------------------------AQARAF--------ANPKMKFIWDTAVEEIQ--G--ADSVSGVKLRN 227 (325)
T ss_dssp ---------------------------HHHHHH--------TCTTEEEECSEEEEEEE--E--SSSEEEEEEEE
T ss_pred ---------------------------HHHHHH--------hcCCceEecCCceEEEc--c--CCcEEEEEEEE
Confidence 111111 24589999999999998 5 46777888863
No 23
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.86 E-value=9e-21 Score=175.09 Aligned_cols=166 Identities=22% Similarity=0.309 Sum_probs=115.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcC----CCCCccccccc----cCCCC---cchhHHHHHHHHHhhcCCc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR----LPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERC 87 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~----~~~~gg~~~~~----~~p~~---~~~~~~~~~~~~~~~~~~i 87 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+ ....||.+.+. ..|.+ ....++..++.+.+.+.++
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv 85 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAE--LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGT 85 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCC
Confidence 469999999999999999999987 99999998 45566665431 11332 2345677778888888899
Q ss_pred EEEeCeEEce-------EEecccceeccCeEEEeccCCCCCCCCCCCccC-CCccchhhH--HHHhcCCCCCCCCCCCCC
Q 019876 88 SFFGNVTLGS-------SVSLSELRQLYHVVVLAYGAESDRALGIPGEDL-IGVHSAREF--VWWYNGHPDGKNLSPDLK 157 (334)
Q Consensus 88 ~~~~~~~v~~-------~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~-~~v~~~~~~--~~~~~~~~~~~~~~~~~~ 157 (334)
+++.+..... .+.++...+.||+||+|||+ .|..|++||.+. .+++....+ ........ ...
T Consensus 86 ~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~vv~A~G~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 157 (333)
T 1vdc_A 86 TIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGA-VAKRLSFVGSGEVLGGFWNRGISACAVCDGAA-------PIF 157 (333)
T ss_dssp EEECCCCCEEECSSSSEEEECSSEEEEEEEEEECCCE-EECCCCCBTCSSSSSCCBTTTEESCHHHHTTS-------GGG
T ss_pred EEEEeEEEEEEEcCCEEEEEECCcEEEcCEEEECCCC-CcCCCCCCCccccccccccCcEEEeccCccch-------hhc
Confidence 9988763211 23333334689999999999 488888998754 222211110 00111110 013
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.+++|+|||+|.+|+|+|..|.+ .+. +|++++|++.+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~--------------------~g~-~V~lv~~~~~~ 194 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTK--------------------YGS-KVYIIHRRDAF 194 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTT--------------------TSS-EEEEECSSSSC
T ss_pred CCCeEEEECCChHHHHHHHHHHh--------------------cCC-eEEEEecCCcC
Confidence 67999999999999999999986 554 79999998765
No 24
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.86 E-value=8.2e-21 Score=174.28 Aligned_cols=203 Identities=20% Similarity=0.256 Sum_probs=141.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc----cCCCC---cchhHHHHHHHHHhhcCCcEEEe
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSFFG 91 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~----~~p~~---~~~~~~~~~~~~~~~~~~i~~~~ 91 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+. .+||.+.+. ..|.+ ....++..++.+.+.+.+++++.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARAN--LQPVLITGM-EKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIF 81 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTT--CCCEEECCS-STTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEccC-CCCceEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 468999999999999999999987 999999975 567665431 12333 23456777778888888999988
Q ss_pred CeEEceE-----Ee-cc-cceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCCCCe
Q 019876 92 NVTLGSS-----VS-LS-ELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDT 161 (334)
Q Consensus 92 ~~~v~~~-----v~-~~-~~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 161 (334)
+.....+ +. .. .....||+||+|||+ .|..|++||.+. .++++....... +..+++
T Consensus 82 ~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~~-------------~~~~~~ 147 (320)
T 1trb_A 82 DHINKVDLQNRPFRLNGDNGEYTCDALIIATGA-SARYLGLPSEEAFKGRGVSACATSDGF-------------FYRNQK 147 (320)
T ss_dssp CCEEEEECSSSSEEEEESSCEEEEEEEEECCCE-EECCCCCHHHHHTBTTTEESCHHHHGG-------------GGTTSE
T ss_pred eeeeEEEecCCEEEEEeCCCEEEcCEEEECCCC-CcCCCCCCChHHhCCceeEecccCCcc-------------ccCCCe
Confidence 8643221 11 22 234689999999999 588888888642 334333221110 125799
Q ss_pred EEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCc
Q 019876 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDD 241 (334)
Q Consensus 162 vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~ 241 (334)
|+|||+|++|+|+|..|++ .+. +|++++|++.+.. .+.+
T Consensus 148 v~ViG~G~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~~~---~~~~----------------- 186 (320)
T 1trb_A 148 VAVIGGGNTAVEEALYLSN--------------------IAS-EVHLIHRRDGFRA---EKIL----------------- 186 (320)
T ss_dssp EEEECSSHHHHHHHHHHTT--------------------TSS-EEEEECSSSSCCC---CHHH-----------------
T ss_pred EEEECCCHHHHHHHHHHHh--------------------cCC-eEEEEEeCCcccc---CHHH-----------------
Confidence 9999999999999999996 554 7999999876521 1111
Q ss_pred cCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 242 LIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
.+.+.+.+ .+.||+|++++.+++|. + +++++.+|.+.+
T Consensus 187 --------------------~~~l~~~l---------~~~gv~i~~~~~v~~i~--~-~~~~v~~v~~~~ 224 (320)
T 1trb_A 187 --------------------IKRLMDKV---------ENGNIILHTNRTLEEVT--G-DQMGVTGVRLRD 224 (320)
T ss_dssp --------------------HHHHHHHH---------HTSSEEEECSCEEEEEE--E-CSSSEEEEEEEC
T ss_pred --------------------HHHHHHhc---------ccCCeEEEcCceeEEEE--c-CCCceEEEEEEe
Confidence 11222222 25799999999999998 5 345788888875
No 25
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.86 E-value=1.2e-21 Score=188.15 Aligned_cols=216 Identities=17% Similarity=0.175 Sum_probs=141.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc-cccc--cccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF-GLVR--SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g-g~~~--~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
.++|+|||||+||+++|..|++.+.+.+|+|||+++... .... ..+..+......+.....+++++.+++++.++.+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v 83 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQNIQLLGGTQV 83 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTTEEEECSCCE
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCCCEEEeCCEE
Confidence 479999999999999999999998445899999986532 1111 0111111111122112234456678999887654
Q ss_pred c------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccCCC---ccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEE
Q 019876 96 G------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDLIG---VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVIL 165 (334)
Q Consensus 96 ~------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVI 165 (334)
. ..+.+.++ .+.||+||+|||+ .|+.|++||.+.++ +++.++...... +...+..+++|+||
T Consensus 84 ~~i~~~~~~v~~~~g~~~~~d~lviAtG~-~p~~~~i~G~~~~~~~~v~~~~~~~d~~~-------l~~~l~~~~~vvVi 155 (431)
T 1q1r_A 84 TAINRDRQQVILSDGRALDYDRLVLATGG-RPRPLPVASGAVGKANNFRYLRTLEDAEC-------IRRQLIADNRLVVI 155 (431)
T ss_dssp EEEETTTTEEEETTSCEEECSEEEECCCE-EECCCGGGTTHHHHSTTEEESSSHHHHHH-------HHHTCCTTCEEEEE
T ss_pred EEEECCCCEEEECCCCEEECCEEEEcCCC-CccCCCCCCcccCCCceEEEECCHHHHHH-------HHHHhhcCCeEEEE
Confidence 2 24555444 4689999999999 68888999976555 654433221100 00112357999999
Q ss_pred cCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCC
Q 019876 166 GQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKS 245 (334)
Q Consensus 166 G~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~ 245 (334)
|+|++|+|+|..|.+ .|. +|+++++.+.++....++++.+
T Consensus 156 GgG~~g~E~A~~l~~--------------------~G~-~Vtlv~~~~~~l~~~~~~~~~~------------------- 195 (431)
T 1q1r_A 156 GGGYIGLEVAATAIK--------------------ANM-HVTLLDTAARVLERVTAPPVSA------------------- 195 (431)
T ss_dssp CCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSTTTTTSCHHHHH-------------------
T ss_pred CCCHHHHHHHHHHHh--------------------CCC-EEEEEEeCCccccchhhHHHHH-------------------
Confidence 999999999999986 565 6999999987764433322221
Q ss_pred CCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeecccc-CCCCeeEEEEEE
Q 019876 246 PTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNE-RSGHVSGVHFEK 311 (334)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~-~~~~v~~v~~~~ 311 (334)
.+.+.+ .+.||+|++++.+++|. ++ ++++++.|.+.+
T Consensus 196 ------------------~l~~~l---------~~~GV~i~~~~~v~~i~--~~~~~~~v~~v~~~~ 233 (431)
T 1q1r_A 196 ------------------FYEHLH---------REAGVDIRTGTQVCGFE--MSTDQQKVTAVLCED 233 (431)
T ss_dssp ------------------HHHHHH---------HHHTCEEECSCCEEEEE--ECTTTCCEEEEEETT
T ss_pred ------------------HHHHHH---------HhCCeEEEeCCEEEEEE--eccCCCcEEEEEeCC
Confidence 122222 14589999999999997 30 146777777754
No 26
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.86 E-value=2.3e-20 Score=170.59 Aligned_cols=198 Identities=17% Similarity=0.217 Sum_probs=138.6
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc--cc--CC--CCcchhHHHHHHHHHhhcCCcEEEeCe
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS--GV--AP--DHPETKIVINQFSRVVQHERCSFFGNV 93 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~--~~--~p--~~~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (334)
++|+||||||+|+++|..|++.+ .+|+|||+ ..||.+.. ++ .+ .+....++..++.+.+++.+++++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--~~v~li~~--~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 77 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKG--IRTGLMGE--RFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQ 77 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--CCEEEECS--STTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CcEEEEeC--CCCceeccccccccccCcCCCCHHHHHHHHHHHHHHcCCeEEccC
Confidence 58999999999999999999987 99999975 35666643 11 01 122345677788888888899999884
Q ss_pred EEc-----------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCC
Q 019876 94 TLG-----------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (334)
Q Consensus 94 ~v~-----------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
.+. ..+.++++ .+.||+||+|||+ .|..|++||.+. .+++....... ....
T Consensus 78 ~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~-------------~~~~ 143 (310)
T 1fl2_A 78 SASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA-KWRNMNVPGEDQYRTKGVTYCPHCDG-------------PLFK 143 (310)
T ss_dssp CEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCE-EECCCCCTTTTTTBTTTEESCHHHHG-------------GGGB
T ss_pred EEEEEEecccCCceEEEEECCCCEEEeCEEEECcCC-CcCCCCCCChhhcccceeEEeccCcH-------------hhcC
Confidence 431 12344444 4689999999999 488888998752 23433221110 1225
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIR 238 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~ 238 (334)
+++|+|||+|++|+|+|..|++ .+ .+|++++|++.+. ++ +.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~--------------------~g-~~Vtlv~~~~~~~--~~-~~--------------- 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAG--------------------IV-EHVTLLEFAPEMK--AD-QV--------------- 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--------------------TB-SEEEEECSSSSCC--SC-HH---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHH--------------------hC-CEEEEEEeCcccC--cc-HH---------------
Confidence 7999999999999999999986 44 4799999987652 11 11
Q ss_pred cCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 239 EDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
+.+.+. ...||++++++.+++|. + +++++.+|.+.+
T Consensus 185 --------------------------~~~~l~--------~~~gv~v~~~~~v~~i~--~-~~~~v~~v~~~~ 220 (310)
T 1fl2_A 185 --------------------------LQDKLR--------SLKNVDIILNAQTTEVK--G-DGSKVVGLEYRD 220 (310)
T ss_dssp --------------------------HHHHHH--------TCTTEEEESSEEEEEEE--E-SSSSEEEEEEEE
T ss_pred --------------------------HHHHHh--------hCCCeEEecCCceEEEE--c-CCCcEEEEEEEE
Confidence 111121 12589999999999998 5 356788888875
No 27
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.86 E-value=1.2e-21 Score=191.39 Aligned_cols=163 Identities=20% Similarity=0.265 Sum_probs=114.2
Q ss_pred CCeEEEECCchHHHHHHHHHhh-cCCCCeEEEEc--------CCCCCcccccc-ccCCCC--------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIID--------RLPTPFGLVRS-GVAPDH-------------------- 68 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~-~~~~~~v~vie--------~~~~~gg~~~~-~~~p~~-------------------- 68 (334)
.++|+||||||||++||..|++ .+ .+|+||| +...+||.|.+ +|.|.+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G--~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~ 84 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYG--KRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGW 84 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHC--CCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcC--CeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCc
Confidence 4799999999999999999999 87 9999999 24566776543 443321
Q ss_pred --------cchhHHHH-----------HHHHHhhcC-CcEEEeCeEEc---eEEecc---------cceeccCeEEEecc
Q 019876 69 --------PETKIVIN-----------QFSRVVQHE-RCSFFGNVTLG---SSVSLS---------ELRQLYHVVVLAYG 116 (334)
Q Consensus 69 --------~~~~~~~~-----------~~~~~~~~~-~i~~~~~~~v~---~~v~~~---------~~~~~yd~lIlATG 116 (334)
.....+.. .+...+++. +++++.+.... ..+.+. ...+.||+||||||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATG 164 (495)
T 2wpf_A 85 EFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATG 164 (495)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCC
Confidence 11112221 223345566 89998886431 234443 23468999999999
Q ss_pred CCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHH
Q 019876 117 AESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWT 196 (334)
Q Consensus 117 s~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~ 196 (334)
+ .|+.|++||.+ .+++..++.. .. ..+++++|||+|++|+|+|..|++
T Consensus 165 s-~p~~p~i~G~~--~~~~~~~~~~----~~---------~~~~~vvViGgG~ig~E~A~~l~~---------------- 212 (495)
T 2wpf_A 165 S-WPQMPAIPGIE--HCISSNEAFY----LP---------EPPRRVLTVGGGFISVEFAGIFNA---------------- 212 (495)
T ss_dssp E-EECCCCCTTGG--GCEEHHHHTT----CS---------SCCSEEEEECSSHHHHHHHHHHHH----------------
T ss_pred C-CcCCCCCCCcc--ccccHHHHHh----hh---------hcCCeEEEECCCHHHHHHHHHHHh----------------
Confidence 9 58888999874 3555444331 11 146899999999999999999986
Q ss_pred HHhcC---CcceEEEEeecCccccCCC
Q 019876 197 ALEGS---SIRKVYLVGRRGPVQAACT 220 (334)
Q Consensus 197 ~~~~~---~~~~Vtiv~r~~~~~~~~~ 220 (334)
. |. +||+++|.+.++..++
T Consensus 213 ----~~~~g~-~Vtlv~~~~~~l~~~d 234 (495)
T 2wpf_A 213 ----YKPPGG-KVTLCYRNNLILRGFD 234 (495)
T ss_dssp ----HCCTTC-EEEEEESSSSSCTTSC
T ss_pred ----hCCCCC-eEEEEEcCCccccccC
Confidence 4 55 6999999988765544
No 28
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=1.8e-21 Score=188.87 Aligned_cols=165 Identities=16% Similarity=0.195 Sum_probs=118.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc---------------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP--------------------------- 69 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~--------------------------- 69 (334)
..++|+|||||+||+++|..|++.+ .+|+|||+++.+||.|.+ ++.|.+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g--~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 82 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLG--FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEI 82 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCcc
Confidence 4689999999999999999999997 999999999888876533 3333211
Q ss_pred chhH-----------HHHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCCCCCCccC
Q 019876 70 ETKI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGEDL 130 (334)
Q Consensus 70 ~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~~ipG~~~ 130 (334)
.... +...+...+++.+++++.+..+. ..+...++ .+.||+||+|||+ .|..|+++|.+.
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs-~p~~p~~~g~~~ 161 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGS-DVKSLPGVTIDE 161 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCE-EECCBTTBCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCC-CCCCCCCCCCCc
Confidence 0111 11123445566789998887542 12333333 4689999999999 588888998766
Q ss_pred CCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEe
Q 019876 131 IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVG 210 (334)
Q Consensus 131 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~ 210 (334)
+++++..++.. .. ..+++|+|||+|++|+|+|..|++ .|. +|++++
T Consensus 162 ~~v~~~~~~~~----~~---------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtli~ 207 (470)
T 1dxl_A 162 KKIVSSTGALA----LS---------EIPKKLVVIGAGYIGLEMGSVWGR--------------------IGS-EVTVVE 207 (470)
T ss_dssp SSEECHHHHTT----CS---------SCCSEEEESCCSHHHHHHHHHHHH--------------------HTC-EEEEEC
T ss_pred ccEEeHHHhhh----hh---------hcCCeEEEECCCHHHHHHHHHHHH--------------------cCC-cEEEEE
Confidence 66776654431 11 146899999999999999999986 565 699999
Q ss_pred ecCccccCC
Q 019876 211 RRGPVQAAC 219 (334)
Q Consensus 211 r~~~~~~~~ 219 (334)
|++.++..+
T Consensus 208 ~~~~~l~~~ 216 (470)
T 1dxl_A 208 FASEIVPTM 216 (470)
T ss_dssp SSSSSSTTS
T ss_pred cCCcccccc
Confidence 998776443
No 29
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.4e-20 Score=174.47 Aligned_cols=161 Identities=22% Similarity=0.252 Sum_probs=117.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc----cCCCC---cchhHHHHHHHHHhhcCCcEE
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSF 89 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~----~~p~~---~~~~~~~~~~~~~~~~~~i~~ 89 (334)
...++|+|||||++|+++|..|++.+ .+|+|||+. .+||.+.+. ..|.+ ....++..++.+++.+.++++
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 88 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQ--LAPLVFEGT-SFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADL 88 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTT--CCCEEECCS-SCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEE
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEecC-CCCCceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 34579999999999999999999986 999999975 567766441 12333 234567778888888889999
Q ss_pred EeCeEEce------EE-ecccc-eeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCC
Q 019876 90 FGNVTLGS------SV-SLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (334)
Q Consensus 90 ~~~~~v~~------~v-~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+.+..... .+ .+.++ .+.||+||+|||+ .|..|++||.+. .++++....... +..
T Consensus 89 ~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~-~~~~~~i~g~~~~~~~~~~~~~~~~~~-------------~~~ 154 (335)
T 2a87_A 89 RMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGA-AARYLQVPGEQELLGRGVSSCATCDGF-------------FFR 154 (335)
T ss_dssp ECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCE-EECCCCCTHHHHTBTTTEESCHHHHGG-------------GGT
T ss_pred EEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCC-CccCCCCCchHhccCCceEEeeccchh-------------hcC
Confidence 88764322 23 33333 4689999999999 588888988642 334433221111 125
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+++|+|||+|++|+|+|..|++ .+. +|++++|++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~--------------------~g~-~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTR--------------------FAR-SVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT--------------------TCS-EEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--------------------hCC-eEEEEEcCCcC
Confidence 7999999999999999999986 554 79999998765
No 30
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.86 E-value=3.2e-21 Score=186.24 Aligned_cols=168 Identities=15% Similarity=0.218 Sum_probs=115.2
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc---CCCC-c--chhHHHHHHHHHhhcCCcEEEeCe
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDH-P--ETKIVINQFSRVVQHERCSFFGNV 93 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~---~p~~-~--~~~~~~~~~~~~~~~~~i~~~~~~ 93 (334)
++|+|||||++|+++|..|++.+++.+|+|||+++.++. ...++ ..+. . .+.++...+.+.+++.+++++.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF-LSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQMRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB-CGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEEESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc-ccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEEeCC
Confidence 589999999999999999999855699999999875432 11110 0111 0 122222233445566789987776
Q ss_pred EEc------eEEeccc------ceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCe
Q 019876 94 TLG------SSVSLSE------LRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDT 161 (334)
Q Consensus 94 ~v~------~~v~~~~------~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 161 (334)
.+. ..+.+.+ ..+.||+||+|||+ .|+.|++||.+.+++++.+++.....-. .....+++
T Consensus 80 ~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs-~p~~p~i~g~~~~~v~~~~~~~~~~~~~-------~~~~~~~~ 151 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGS-KPTVPPIPGIDSSRVYLCKNYNDAKKLF-------EEAPKAKT 151 (452)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCTTTTSTTEEECSSHHHHHHHH-------HHGGGCSE
T ss_pred EEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCC-CcCCCCCCCCCCCCEEEeCcHHHHHHHH-------HHhccCCe
Confidence 542 2344322 24689999999999 5888999998777777654432210000 00125789
Q ss_pred EEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcccc
Q 019876 162 AVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (334)
Q Consensus 162 vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~ 217 (334)
++|||+|++|+|+|..|++ .|. +|+++++.+.++.
T Consensus 152 vvViGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~~~~~~l~ 186 (452)
T 2cdu_A 152 ITIIGSGYIGAELAEAYSN--------------------QNY-NVNLIDGHERVLY 186 (452)
T ss_dssp EEEECCSHHHHHHHHHHHT--------------------TTC-EEEEEESSSSTTT
T ss_pred EEEECcCHHHHHHHHHHHh--------------------cCC-EEEEEEcCCchhh
Confidence 9999999999999999986 565 6999999988765
No 31
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.86 E-value=2.4e-21 Score=183.20 Aligned_cols=170 Identities=14% Similarity=0.158 Sum_probs=119.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc----cccCCCCcchhHHHH-HHHHHhhcCCcEEEeCe
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR----SGVAPDHPETKIVIN-QFSRVVQHERCSFFGNV 93 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~----~~~~p~~~~~~~~~~-~~~~~~~~~~i~~~~~~ 93 (334)
.++|+|||||+||++||..|++.+++.+|+|+|+++ |..+. ....+......++.. .+.++++..+++++.+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 81 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNARILTHT 81 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCEEECSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcEEEeCC
Confidence 478999999999999999999998667899999875 21111 011122222333322 34555667789998765
Q ss_pred EEc------eEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcC
Q 019876 94 TLG------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQ 167 (334)
Q Consensus 94 ~v~------~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~ 167 (334)
.+. ..+.+.+..+.||+||+|||+ .|+.|++||.+.+++++.+++..... . ...+..+++++|||+
T Consensus 82 ~v~~i~~~~~~v~~~~~~~~~d~lviAtG~-~p~~p~i~g~~~~~v~~~~~~~~~~~-~------~~~~~~~~~v~ViGg 153 (384)
T 2v3a_A 82 RVTGIDPGHQRIWIGEEEVRYRDLVLAWGA-EPIRVPVEGDAQDALYPINDLEDYAR-F------RQAAAGKRRVLLLGA 153 (384)
T ss_dssp CCCEEEGGGTEEEETTEEEECSEEEECCCE-EECCCCCBSTTTTCEEECSSHHHHHH-H------HHHHTTCCEEEEECC
T ss_pred EEEEEECCCCEEEECCcEEECCEEEEeCCC-CcCCCCCCCcCcCCEEEECCHHHHHH-H------HHhhccCCeEEEECC
Confidence 432 345555556789999999999 58889999987677877666543211 0 001224799999999
Q ss_pred CHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCC
Q 019876 168 GNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAAC 219 (334)
Q Consensus 168 G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~ 219 (334)
|.+|+|+|..|.+ .|. +|+++++.+.++..+
T Consensus 154 G~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 154 GLIGCEFANDLSS--------------------GGY-QLDVVAPCEQVMPGL 184 (384)
T ss_dssp SHHHHHHHHHHHH--------------------TTC-EEEEEESSSSSSTTT
T ss_pred CHHHHHHHHHHHh--------------------CCC-eEEEEecCcchhhcc
Confidence 9999999999996 565 699999998776544
No 32
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.86 E-value=1.8e-20 Score=171.45 Aligned_cols=158 Identities=19% Similarity=0.245 Sum_probs=114.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCCCccccccc----cCCCC---cchhHHHHHHHHHhhcCCcEEEe
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRSG----VAPDH---PETKIVINQFSRVVQHERCSFFG 91 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~~gg~~~~~----~~p~~---~~~~~~~~~~~~~~~~~~i~~~~ 91 (334)
++|+|||||++|+++|..|++.+ . +|+|||++ .+||.+.+. ..|.+ ....++..++.+.+.+.+++++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--~~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~ 78 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGG--VKNAVLFEKG-MPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEM 78 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CSSEEEECSS-STTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEEC
T ss_pred ceEEEECccHHHHHHHHHHHHCC--CCcEEEEcCC-CCCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEE
Confidence 58999999999999999999987 8 99999995 566665431 12332 23456777888888888999887
Q ss_pred CeEEce-------EEecccc-eeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCCCC
Q 019876 92 NVTLGS-------SVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTD 160 (334)
Q Consensus 92 ~~~v~~-------~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k 160 (334)
...... .+...++ .+.||+||+|||+ .|+.|++||.+. +++++....... ...++
T Consensus 79 ~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~-~~~~~~~~g~~~~~~~~~~~~~~~~~~-------------~~~~~ 144 (311)
T 2q0l_A 79 TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG-SPKRTGIKGESEYWGKGVSTCATCDGF-------------FYKNK 144 (311)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE-EECCCCCBTHHHHBTTTEESCHHHHGG-------------GGTTS
T ss_pred EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC-CCCCCCCCChhhccCCcEEEeecCChh-------------hcCCC
Confidence 543321 2333333 4689999999999 588888998642 344443222110 12579
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+|+|||+|.+|+|+|..|++ .+. +|++++|++.+
T Consensus 145 ~v~VvG~G~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~ 178 (311)
T 2q0l_A 145 EVAVLGGGDTAVEEAIYLAN--------------------ICK-KVYLIHRRDGF 178 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHT--------------------TSS-EEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHh--------------------cCC-EEEEEeeCCcc
Confidence 99999999999999999986 554 69999998765
No 33
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=2.1e-21 Score=189.95 Aligned_cols=161 Identities=16% Similarity=0.282 Sum_probs=109.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCC-------------------------cch-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH-------------------------PET- 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~-------------------------~~~- 71 (334)
.++|+|||||+||++||..|++.+ .+|+|||+++ .||.|.+ ++.|.+ ...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g--~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHN--AKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHH
Confidence 368999999999999999999986 9999999985 6665432 332211 011
Q ss_pred ----------hHHHHHHHHHhhcCCcEEEeCeEEc---eEEeccc--------------ceeccCeEEEeccCCCCCCCC
Q 019876 72 ----------KIVINQFSRVVQHERCSFFGNVTLG---SSVSLSE--------------LRQLYHVVVLAYGAESDRALG 124 (334)
Q Consensus 72 ----------~~~~~~~~~~~~~~~i~~~~~~~v~---~~v~~~~--------------~~~~yd~lIlATGs~~p~~~~ 124 (334)
..+...+...+++.+++++.+..+. ..+.+.+ ..+.||+||||||+ .|..|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs-~p~~p~ 157 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGN-KPVFPP 157 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCC-CBCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCC-CCCCCC
Confidence 1122233455567789998875431 1233322 24689999999999 588888
Q ss_pred CCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcc
Q 019876 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (334)
Q Consensus 125 ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (334)
+||.+ .+++..++.. . ..+++|+|||+|++|+|+|..|++ .|.
T Consensus 158 i~G~~--~~~~~~~~~~----~----------~~~~~vvViGgG~ig~E~A~~l~~--------------------~g~- 200 (500)
T 1onf_A 158 VKGIE--NTISSDEFFN----I----------KESKKIGIVGSGYIAVELINVIKR--------------------LGI- 200 (500)
T ss_dssp CTTGG--GCEEHHHHTT----C----------CCCSEEEEECCSHHHHHHHHHHHT--------------------TTC-
T ss_pred CCCCC--cccCHHHHhc----c----------CCCCeEEEECChHHHHHHHHHHHH--------------------cCC-
Confidence 99874 3444433321 1 126899999999999999999986 675
Q ss_pred eEEEEeecCccccCCC
Q 019876 205 KVYLVGRRGPVQAACT 220 (334)
Q Consensus 205 ~Vtiv~r~~~~~~~~~ 220 (334)
+||+++|.+.++..++
T Consensus 201 ~Vtlv~~~~~~l~~~d 216 (500)
T 1onf_A 201 DSYIFARGNRILRKFD 216 (500)
T ss_dssp EEEEECSSSSSCTTSC
T ss_pred eEEEEecCCccCcccc
Confidence 6999999988765444
No 34
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.86 E-value=6.6e-21 Score=175.39 Aligned_cols=160 Identities=22% Similarity=0.289 Sum_probs=119.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc-------CCCCc--chhHHHHHHHHHhhcCCcEE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------APDHP--ETKIVINQFSRVVQHERCSF 89 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~-------~p~~~--~~~~~~~~~~~~~~~~~i~~ 89 (334)
.++|+|||||+||+++|..|++.+ .+|+|||+.+.+||.+.+.. .|.+. ...++..++.+.+.+.++++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQ--ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTI 84 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEE
T ss_pred cceEEEECCCHHHHHHHHHHHHCC--CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcE
Confidence 469999999999999999999986 99999999999888774311 23333 34678888888888889999
Q ss_pred EeCeEEce---------EEecccceeccCeEEEeccCC--CCCCCCCCCccC-C--CccchhhHHHHhcCCCCCCCCCCC
Q 019876 90 FGNVTLGS---------SVSLSELRQLYHVVVLAYGAE--SDRALGIPGEDL-I--GVHSAREFVWWYNGHPDGKNLSPD 155 (334)
Q Consensus 90 ~~~~~v~~---------~v~~~~~~~~yd~lIlATGs~--~p~~~~ipG~~~-~--~v~~~~~~~~~~~~~~~~~~~~~~ 155 (334)
+.++.+.. .+...++++.||+||+|||+. .|..|++||.+. . +++. ...+..
T Consensus 85 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~---------~~~~~~----- 150 (332)
T 3lzw_A 85 CLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY---------FVDDLQ----- 150 (332)
T ss_dssp ECSCCEEEEEECTTSCEEEEESSEEEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES---------SCSCGG-----
T ss_pred EccCEEEEEEECCCCcEEEEECCCEEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE---------ecCCHH-----
Confidence 87765421 344445557899999999983 377888998753 1 2221 111111
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 156 LKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 156 ~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
...+++|+|||+|.+|+|+|..|++ .+ .+|++++|++.+
T Consensus 151 ~~~~~~v~vvG~g~~~~e~a~~l~~--------------------~~-~~v~~~~~~~~~ 189 (332)
T 3lzw_A 151 KFAGRRVAILGGGDSAVDWALMLEP--------------------IA-KEVSIIHRRDKF 189 (332)
T ss_dssp GGBTCEEEEECSSHHHHHHHHHHTT--------------------TB-SEEEEECSSSSC
T ss_pred HcCCCEEEEECCCHhHHHHHHHHHh--------------------hC-CeEEEEEecCcC
Confidence 1157999999999999999999986 45 479999998765
No 35
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.86 E-value=4e-21 Score=187.49 Aligned_cols=163 Identities=19% Similarity=0.277 Sum_probs=114.3
Q ss_pred CCeEEEECCchHHHHHHHHHhh-cCCCCeEEEEc--------CCCCCcccccc-ccCCCC--------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIID--------RLPTPFGLVRS-GVAPDH-------------------- 68 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~-~~~~~~v~vie--------~~~~~gg~~~~-~~~p~~-------------------- 68 (334)
.++|+|||||++|++||..|++ .+ .+|+||| +...+||.|.+ +|.|.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G--~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHK--KRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHC--CCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcC--CEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 4799999999999999999999 87 9999999 24566776533 443321
Q ss_pred --------cchhHH-----------HHHHHHHhhcC-CcEEEeCeEEc---eEEecc-----c----ceeccCeEEEecc
Q 019876 69 --------PETKIV-----------INQFSRVVQHE-RCSFFGNVTLG---SSVSLS-----E----LRQLYHVVVLAYG 116 (334)
Q Consensus 69 --------~~~~~~-----------~~~~~~~~~~~-~i~~~~~~~v~---~~v~~~-----~----~~~~yd~lIlATG 116 (334)
.....+ ...+...+++. +++++.+.... ..+.+. + ..+.||+||||||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtG 160 (490)
T 1fec_A 81 ELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATG 160 (490)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCC
Confidence 011111 12334455677 99998886432 234332 2 3468999999999
Q ss_pred CCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHH
Q 019876 117 AESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWT 196 (334)
Q Consensus 117 s~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~ 196 (334)
+ .|..|++||.+ .+++..++.. .. ..+++++|||+|++|+|+|..|.+
T Consensus 161 s-~p~~p~i~g~~--~~~~~~~~~~----~~---------~~~~~vvViGgG~ig~E~A~~l~~---------------- 208 (490)
T 1fec_A 161 S-WPQHLGIEGDD--LCITSNEAFY----LD---------EAPKRALCVGGGYISIEFAGIFNA---------------- 208 (490)
T ss_dssp E-EECCCCSBTGG--GCBCHHHHTT----CS---------SCCSEEEEECSSHHHHHHHHHHHH----------------
T ss_pred C-CCCCCCCCCcc--ceecHHHHhh----hh---------hcCCeEEEECCCHHHHHHHHHHHh----------------
Confidence 9 58888899874 3555444331 11 146899999999999999999986
Q ss_pred HHhcC---CcceEEEEeecCccccCCC
Q 019876 197 ALEGS---SIRKVYLVGRRGPVQAACT 220 (334)
Q Consensus 197 ~~~~~---~~~~Vtiv~r~~~~~~~~~ 220 (334)
. |. +||+++|.+.++..++
T Consensus 209 ----~~~~g~-~Vtlv~~~~~~l~~~d 230 (490)
T 1fec_A 209 ----YKARGG-QVDLAYRGDMILRGFD 230 (490)
T ss_dssp ----HSCTTC-EEEEEESSSSSSTTSC
T ss_pred ----hccCcC-eEEEEEcCCCcccccC
Confidence 4 65 6999999988765443
No 36
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.86 E-value=3.8e-21 Score=186.73 Aligned_cols=212 Identities=19% Similarity=0.196 Sum_probs=129.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc----cccccccCCCC-cchhH-------HHHHHHHHhhcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF----GLVRSGVAPDH-PETKI-------VINQFSRVVQHER 86 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g----g~~~~~~~p~~-~~~~~-------~~~~~~~~~~~~~ 86 (334)
+++|+|||||+||++||..|++.+++.+|+|||+++.++ +...+ + ++. ....+ +..+...+.+..+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYY-V-SGEVSNIESLQATPYNVVRDPEFFRINKD 80 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchh-h-cCCCCchHHhccccchhccCHHHHhhhcC
Confidence 479999999999999999999996669999999987743 11111 1 111 01112 2333344444578
Q ss_pred cEEEeCeEEc------eEEeccc---c---eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHH--hcCCCCCCCC
Q 019876 87 CSFFGNVTLG------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNL 152 (334)
Q Consensus 87 i~~~~~~~v~------~~v~~~~---~---~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~--~~~~~~~~~~ 152 (334)
++++.+..+. ..+.+.+ + .+.||+||+|||+ .|..|++||.+.+++++....... +.....
T Consensus 81 i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~---- 155 (472)
T 3iwa_A 81 VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGS-KANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS---- 155 (472)
T ss_dssp CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCSCTTTTSBTEEECCSHHHHHHHHHHCC----
T ss_pred cEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCC-CcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh----
Confidence 9988877652 2233322 2 4589999999999 699999999887777655433211 110000
Q ss_pred CCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC-CcceEEEEeecCccccCCCHHHHHHHHcCC
Q 019876 153 SPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS-SIRKVYLVGRRGPVQAACTAKELREILGIK 231 (334)
Q Consensus 153 ~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~ 231 (334)
-..+++++|||+|++|+|+|..|.+ . +. +|++++|.+.++....++++.+
T Consensus 156 ---~~~~~~vvViGgG~~g~e~A~~l~~--------------------~~g~-~Vtlv~~~~~~l~~~~~~~~~~----- 206 (472)
T 3iwa_A 156 ---AGEVSKAVIVGGGFIGLEMAVSLAD--------------------MWGI-DTTVVELADQIMPGFTSKSLSQ----- 206 (472)
T ss_dssp ---TTSCSEEEEECCSHHHHHHHHHHHH--------------------HHCC-EEEEECSSSSSSTTTSCHHHHH-----
T ss_pred ---cCCCCEEEEECCCHHHHHHHHHHHH--------------------hcCC-cEEEEEccCcccccccCHHHHH-----
Confidence 0147899999999999999999986 5 55 6999999987765222222221
Q ss_pred ceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 232 NLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 232 gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
.+.+.+. +.||+|++++.+++|. . .+++++ |.+.+
T Consensus 207 --------------------------------~l~~~l~---------~~GV~i~~~~~v~~i~--~-~~~~v~-v~~~~ 241 (472)
T 3iwa_A 207 --------------------------------MLRHDLE---------KNDVVVHTGEKVVRLE--G-ENGKVA-RVITD 241 (472)
T ss_dssp --------------------------------HHHHHHH---------HTTCEEECSCCEEEEE--E-SSSBEE-EEEES
T ss_pred --------------------------------HHHHHHH---------hcCCEEEeCCEEEEEE--c-cCCeEE-EEEeC
Confidence 2222222 5689999999999997 4 345555 55554
No 37
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.86 E-value=3.3e-21 Score=186.32 Aligned_cols=162 Identities=14% Similarity=0.209 Sum_probs=116.1
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc-------------------------chhH
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP-------------------------ETKI 73 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~-------------------------~~~~ 73 (334)
++|+||||||||++||..|++.+ .+|+|||+++.+||.+.+ ++.|.+. ....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLG--MKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCC--CeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHH
Confidence 68999999999999999999987 999999999778876533 3333210 1111
Q ss_pred H-----------HHHHHHHhhcCCcEEEeCeEEc---eEEecc--cceeccCeEEEeccCCCCCCCCCCCccCCCccchh
Q 019876 74 V-----------INQFSRVVQHERCSFFGNVTLG---SSVSLS--ELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAR 137 (334)
Q Consensus 74 ~-----------~~~~~~~~~~~~i~~~~~~~v~---~~v~~~--~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~ 137 (334)
+ ...+.+++++.+++++.+..+. ..+.+. ...+.||+||+|||+ .|+.|+++|.+..++++..
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g~~~~~d~lviAtG~-~p~~~~~~g~~~~~v~~~~ 158 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGS-APLIPPWAQVDYERVVTST 158 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTCCEEEEEEEEECCCE-EECCCTTBCCCSSSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCCEEEEecEEEECCCC-CCCCCCCCCCCcCcEechH
Confidence 1 1122445566789998876542 123222 234689999999999 5888888887655677665
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcccc
Q 019876 138 EFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (334)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~ 217 (334)
++.. .. ..+++|+|||+|.+|+|+|..|++ .|. +|+++++++.+++
T Consensus 159 ~~~~----~~---------~~~~~vvIiGgG~~g~e~A~~l~~--------------------~g~-~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 159 EALS----FP---------EVPKRLIVVGGGVIGLELGVVWHR--------------------LGA-EVIVLEYMDRILP 204 (455)
T ss_dssp HHTC----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSSCT
T ss_pred Hhhc----cc---------cCCCeEEEECCCHHHHHHHHHHHH--------------------cCC-EEEEEecCCcccc
Confidence 4431 11 146899999999999999999986 565 6999999987654
Q ss_pred C
Q 019876 218 A 218 (334)
Q Consensus 218 ~ 218 (334)
.
T Consensus 205 ~ 205 (455)
T 2yqu_A 205 T 205 (455)
T ss_dssp T
T ss_pred c
Confidence 3
No 38
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.86 E-value=9.2e-21 Score=175.18 Aligned_cols=202 Identities=22% Similarity=0.221 Sum_probs=139.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc-------CCCCc--chhHHHHHHHHHhhcCCcEE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------APDHP--ETKIVINQFSRVVQHERCSF 89 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~-------~p~~~--~~~~~~~~~~~~~~~~~i~~ 89 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+.+.+||.+.... .|.++ ...++..++.+.+...++++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRG--LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVY 82 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEE
Confidence 479999999999999999999986 99999999988887764211 12221 24567777878888888988
Q ss_pred EeCeEEce--------EEecccc-eeccCeEEEeccCC--CCCCCCCCCccC-C--CccchhhHHHHhcCCCCCCCCCCC
Q 019876 90 FGNVTLGS--------SVSLSEL-RQLYHVVVLAYGAE--SDRALGIPGEDL-I--GVHSAREFVWWYNGHPDGKNLSPD 155 (334)
Q Consensus 90 ~~~~~v~~--------~v~~~~~-~~~yd~lIlATGs~--~p~~~~ipG~~~-~--~v~~~~~~~~~~~~~~~~~~~~~~ 155 (334)
+.++.+.. .+...++ .+.||+||+|||+. .|..+++||.+. . +++.. ..+. .
T Consensus 83 ~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~---------~~~~-----~ 148 (335)
T 2zbw_A 83 SLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYA---------VKSK-----A 148 (335)
T ss_dssp EESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESS---------CSCG-----G
T ss_pred EeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEe---------cCch-----h
Confidence 87755421 2333333 46899999999984 377778888642 1 12111 0010 0
Q ss_pred CCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEE
Q 019876 156 LKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYV 235 (334)
Q Consensus 156 ~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~ 235 (334)
...+++|+|||+|++|+|+|..|++ .+. +|++++|++.+... + ..
T Consensus 149 ~~~~~~v~viG~G~~g~e~a~~l~~--------------------~g~-~V~~v~~~~~~~~~--~-~~----------- 193 (335)
T 2zbw_A 149 EFQGKRVLIVGGGDSAVDWALNLLD--------------------TAR-RITLIHRRPQFRAH--E-AS----------- 193 (335)
T ss_dssp GGTTCEEEEECSSHHHHHHHHHTTT--------------------TSS-EEEEECSSSSCCSC--H-HH-----------
T ss_pred hcCCCEEEEECCCHHHHHHHHHHHh--------------------hCC-EEEEEEcCCccCcc--H-HH-----------
Confidence 1257999999999999999999986 454 69999998765311 0 00
Q ss_pred EEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEE
Q 019876 236 HIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (334)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~ 310 (334)
.+.+.+.+. +.||++++++.+++|. + ++++.+|.+.
T Consensus 194 --------------------------~~~l~~~l~---------~~gv~v~~~~~v~~i~--~--~~~~~~v~~~ 229 (335)
T 2zbw_A 194 --------------------------VKELMKAHE---------EGRLEVLTPYELRRVE--G--DERVRWAVVF 229 (335)
T ss_dssp --------------------------HHHHHHHHH---------TTSSEEETTEEEEEEE--E--SSSEEEEEEE
T ss_pred --------------------------HHHHHhccc---------cCCeEEecCCcceeEc--c--CCCeeEEEEE
Confidence 112223322 5689999999999998 5 4677788876
No 39
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.86 E-value=2.6e-21 Score=186.86 Aligned_cols=162 Identities=12% Similarity=0.187 Sum_probs=114.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc---------------------------c
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP---------------------------E 70 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~---------------------------~ 70 (334)
.++|+|||||++|+++|..|++.+ .+|+|||++ ..||.|.+ +|.|.+. .
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~ 80 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYG--QKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFN 80 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTT--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccC
Confidence 479999999999999999999986 999999998 56665532 3333210 0
Q ss_pred hhH-----------HHHHHHHHhhcCCcEEEeCeEEc---eEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccch
Q 019876 71 TKI-----------VINQFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSA 136 (334)
Q Consensus 71 ~~~-----------~~~~~~~~~~~~~i~~~~~~~v~---~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~ 136 (334)
... +...+...+...+++++.+.... ..+.++...+.||+||||||+ .|..|++||.+ .+++.
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs-~p~~p~i~g~~--~~~~~ 157 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGG-RPSHPDIPGVE--YGIDS 157 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETTEEEEEEEEEECCCE-EECCCCSTTGG--GSBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECCEEEEeCEEEECCCC-CCCCCCCCCcc--ceecH
Confidence 111 11222344566789998875421 234443334689999999999 58888999874 35555
Q ss_pred hhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccc
Q 019876 137 REFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~ 216 (334)
.++.. .. ..+++++|||+|++|+|+|..|++ .|. +|+++++.+.++
T Consensus 158 ~~~~~----~~---------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l 203 (450)
T 1ges_A 158 DGFFA----LP---------ALPERVAVVGAGYIGVELGGVING--------------------LGA-KTHLFEMFDAPL 203 (450)
T ss_dssp HHHHH----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSSS
T ss_pred HHhhh----hh---------hcCCeEEEECCCHHHHHHHHHHHh--------------------cCC-EEEEEEeCCchh
Confidence 44442 11 146899999999999999999986 565 699999998776
Q ss_pred cCCC
Q 019876 217 AACT 220 (334)
Q Consensus 217 ~~~~ 220 (334)
..++
T Consensus 204 ~~~~ 207 (450)
T 1ges_A 204 PSFD 207 (450)
T ss_dssp TTSC
T ss_pred hhhh
Confidence 5443
No 40
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=8.6e-21 Score=183.41 Aligned_cols=162 Identities=14% Similarity=0.201 Sum_probs=114.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc-cccCCCCc--------------------------ch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDHP--------------------------ET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~-~~~~p~~~--------------------------~~ 71 (334)
.++|+|||||+||++||..|++.+ .+|+|||++ .+||.+. +++.|.+. ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g--~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLG--QKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 478999999999999999999997 999999998 5666542 23222110 01
Q ss_pred hH-----------HHHHHHHHhhcCCcEEEeCeEEc-----eEEecccc--eeccCeEEEeccCCCCCCCCCCCccCCCc
Q 019876 72 KI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL--RQLYHVVVLAYGAESDRALGIPGEDLIGV 133 (334)
Q Consensus 72 ~~-----------~~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~--~~~yd~lIlATGs~~p~~~~ipG~~~~~v 133 (334)
.. +...+...+++.+++++.+..+. ..+...++ .+.||+||+|||+ .|..|+++|.+.. +
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs-~p~~~~~~g~~~~-v 157 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGS-RPIELPNFKFSNR-I 157 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCE-EECCBTTBCCCSS-E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCC-CCCCCCCCCccce-E
Confidence 11 22233456677899998887642 12333333 4689999999999 5888888886543 5
Q ss_pred cchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
++..++.. .. ..+++|+|||+|++|+|+|..|++ .|. +|+++++++
T Consensus 158 ~~~~~~~~----~~---------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~ 203 (455)
T 1ebd_A 158 LDSTGALN----LG---------EVPKSLVVIGGGYIGIELGTAYAN--------------------FGT-KVTILEGAG 203 (455)
T ss_dssp ECHHHHHT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSS
T ss_pred ecHHHHhc----cc---------cCCCeEEEECCCHHHHHHHHHHHH--------------------cCC-cEEEEEcCC
Confidence 55544331 11 146899999999999999999986 675 699999998
Q ss_pred ccccCC
Q 019876 214 PVQAAC 219 (334)
Q Consensus 214 ~~~~~~ 219 (334)
.++..+
T Consensus 204 ~~l~~~ 209 (455)
T 1ebd_A 204 EILSGF 209 (455)
T ss_dssp SSSTTS
T ss_pred cccccc
Confidence 776443
No 41
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.85 E-value=3.6e-21 Score=187.38 Aligned_cols=172 Identities=15% Similarity=0.170 Sum_probs=114.3
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc-c--ccccCCCCcchhHHHHHHHHHh-hcCCcEEEeCeE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-V--RSGVAPDHPETKIVINQFSRVV-QHERCSFFGNVT 94 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~-~--~~~~~p~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 94 (334)
+++|+|||||+||++||..|++.+++.+|+|||+++..+.. + .+-.........++..+..+.+ +..+++++.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~~~~~ 115 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHE 115 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEESSEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEEeCCE
Confidence 47999999999999999999997556999999998765321 1 0000011111222222222333 455899988765
Q ss_pred Ec------eEEeccc---c---eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHH--hcCCCCCCCCCCCCCCCC
Q 019876 95 LG------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKSTD 160 (334)
Q Consensus 95 v~------~~v~~~~---~---~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~k 160 (334)
+. ..+.+.. + .+.||+||+|||+ .|+.|++||.+.+++++..++... +..... -..++
T Consensus 116 v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~-------~~~~~ 187 (480)
T 3cgb_A 116 VTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGV-RPVMPEWEGRDLQGVHLLKTIPDAERILKTLE-------TNKVE 187 (480)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCBTTTSBTEECCSSHHHHHHHHHHHH-------SSCCC
T ss_pred EEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCC-cccCCCCCCccCCCEEEeCCHHHHHHHHHHhh-------hcCCC
Confidence 42 2343332 3 4689999999999 588899999877777765433221 110000 01579
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCC
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAAC 219 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~ 219 (334)
+|+|||+|++|+|+|..|.+ .|. +|+++++++.++..+
T Consensus 188 ~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~~ 225 (480)
T 3cgb_A 188 DVTIIGGGAIGLEMAETFVE--------------------LGK-KVRMIERNDHIGTIY 225 (480)
T ss_dssp EEEEECCHHHHHHHHHHHHH--------------------TTC-EEEEECCGGGTTSSS
T ss_pred eEEEECCCHHHHHHHHHHHh--------------------cCC-eEEEEEeCCchhhcC
Confidence 99999999999999999986 565 699999998775433
No 42
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.85 E-value=4.2e-21 Score=186.07 Aligned_cols=162 Identities=16% Similarity=0.207 Sum_probs=114.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCC--------------------------cch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH--------------------------PET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~--------------------------~~~ 71 (334)
.++|+|||||++|+++|..|++.+ .+|+|||++ .+||.|.+ +|.|.+ ...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g--~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 80 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFG--KRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDW 80 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--CcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCH
Confidence 579999999999999999999986 999999998 56665432 322211 011
Q ss_pred hH-----------HHHHHHHHhhcCCcEEEeCeEEc---eEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchh
Q 019876 72 KI-----------VINQFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAR 137 (334)
Q Consensus 72 ~~-----------~~~~~~~~~~~~~i~~~~~~~v~---~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~ 137 (334)
.. +...+...+...+++++.+.... ..+.++...+.||+||||||+ .|..|++||.+ .+++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g~~~~~d~lviAtGs-~p~~p~i~G~~--~~~~~~ 157 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGG-RPIVPRLPGAE--LGITSD 157 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCE-EECCCSCTTGG--GSBCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECCEEEEcCEEEECCCC-CCCCCCCCCcc--ceecHH
Confidence 11 11223344566789998876531 234443335689999999999 58888999874 345554
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcccc
Q 019876 138 EFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (334)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~ 217 (334)
++.. .. ..+++|+|||+|++|+|+|..|++ .|. +|+++++++.++.
T Consensus 158 ~~~~----~~---------~~~~~vvVvGgG~~g~e~A~~l~~--------------------~G~-~Vtlv~~~~~~l~ 203 (463)
T 2r9z_A 158 GFFA----LQ---------QQPKRVAIIGAGYIGIELAGLLRS--------------------FGS-EVTVVALEDRLLF 203 (463)
T ss_dssp HHHH----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSSST
T ss_pred HHhh----hh---------ccCCEEEEECCCHHHHHHHHHHHh--------------------cCC-EEEEEEcCCcccc
Confidence 4432 11 146899999999999999999986 675 6999999987765
Q ss_pred CCC
Q 019876 218 ACT 220 (334)
Q Consensus 218 ~~~ 220 (334)
.++
T Consensus 204 ~~~ 206 (463)
T 2r9z_A 204 QFD 206 (463)
T ss_dssp TSC
T ss_pred ccC
Confidence 444
No 43
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.85 E-value=7.9e-21 Score=184.77 Aligned_cols=162 Identities=17% Similarity=0.225 Sum_probs=113.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc-cccCCCC--------------------------cch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDH--------------------------PET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~-~~~~p~~--------------------------~~~ 71 (334)
.++|+||||||+|++||..|++.+ .+|+|||++ ..||.|. .++.|.+ ...
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G--~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELG--ARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 579999999999999999999997 999999987 4565532 2332211 011
Q ss_pred h-----------HHHHHHHHHhhcCCcEEEeCeEEc-----eEEecccceeccCeEEEeccCCCCCCC---CCCCccCCC
Q 019876 72 K-----------IVINQFSRVVQHERCSFFGNVTLG-----SSVSLSELRQLYHVVVLAYGAESDRAL---GIPGEDLIG 132 (334)
Q Consensus 72 ~-----------~~~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~~~~yd~lIlATGs~~p~~~---~ipG~~~~~ 132 (334)
. .+...+...++..+++++.+.... ..+..+..++.||+||||||+ .|..| ++||.+ .
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g~~~~~d~lviAtG~-~p~~p~~~~i~G~~--~ 173 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGG-MPSTPHESQIPGAS--L 173 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETTEEEECSCEEECCCE-EECCCCTTTSTTGG--G
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECCEEEEeeEEEEccCC-CCCCCCcCCCCCCc--e
Confidence 1 122233445566789988776431 234444445789999999999 58888 899875 2
Q ss_pred ccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeec
Q 019876 133 VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (334)
Q Consensus 133 v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~ 212 (334)
+.+..++.. .. ..+++++|||+|++|+|+|..|++ .|. +||+++|.
T Consensus 174 ~~~~~~~~~----~~---------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~~~ 219 (478)
T 3dk9_A 174 GITSDGFFQ----LE---------ELPGRSVIVGAGYIAVEMAGILSA--------------------LGS-KTSLMIRH 219 (478)
T ss_dssp SBCHHHHTT----CC---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSS
T ss_pred eEchHHhhc----hh---------hcCccEEEECCCHHHHHHHHHHHH--------------------cCC-eEEEEEeC
Confidence 333333321 11 146899999999999999999986 665 69999999
Q ss_pred CccccCCC
Q 019876 213 GPVQAACT 220 (334)
Q Consensus 213 ~~~~~~~~ 220 (334)
+.++..++
T Consensus 220 ~~~l~~~d 227 (478)
T 3dk9_A 220 DKVLRSFD 227 (478)
T ss_dssp SSSCTTSC
T ss_pred CccccccC
Confidence 88765444
No 44
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=6.2e-21 Score=185.64 Aligned_cols=163 Identities=15% Similarity=0.170 Sum_probs=113.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCC----------------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH---------------------------- 68 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~---------------------------- 68 (334)
..++|+|||||++|++||..|++.+ .+|+|||++ ..||.|.+ +|.|.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g--~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYG--AKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDK 86 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTS--CCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCC--CcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccc
Confidence 3579999999999999999999986 999999997 46665432 221210
Q ss_pred ----cchhHH-----------HHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCC-C
Q 019876 69 ----PETKIV-----------INQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRAL-G 124 (334)
Q Consensus 69 ----~~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~-~ 124 (334)
.....+ ...+...++..+++++.+.... ..+...++ .+.||+||||||+ .|..| +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs-~p~~p~~ 165 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGG-KAIFPEN 165 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCE-EECCCTT
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCC-CCCCCCC
Confidence 011111 1223345566789988775431 12333333 4689999999999 58888 8
Q ss_pred CCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcc
Q 019876 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (334)
Q Consensus 125 ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (334)
+||.+ .+++..++.. .. ..+++++|||+|++|+|+|..|++ .|.
T Consensus 166 i~g~~--~~~~~~~~~~----l~---------~~~~~vvViGgG~ig~E~A~~l~~--------------------~g~- 209 (479)
T 2hqm_A 166 IPGFE--LGTDSDGFFR----LE---------EQPKKVVVVGAGYIGIELAGVFHG--------------------LGS- 209 (479)
T ss_dssp STTGG--GSBCHHHHHH----CS---------SCCSEEEEECSSHHHHHHHHHHHH--------------------TTC-
T ss_pred CCCcc--cccchHHHhc----cc---------ccCCeEEEECCCHHHHHHHHHHHH--------------------cCC-
Confidence 99874 2455544432 10 146899999999999999999986 565
Q ss_pred eEEEEeecCccccCCC
Q 019876 205 KVYLVGRRGPVQAACT 220 (334)
Q Consensus 205 ~Vtiv~r~~~~~~~~~ 220 (334)
+|++++|.+.++..++
T Consensus 210 ~Vtlv~~~~~~l~~~d 225 (479)
T 2hqm_A 210 ETHLVIRGETVLRKFD 225 (479)
T ss_dssp EEEEECSSSSSCTTSC
T ss_pred ceEEEEeCCccccccC
Confidence 6999999988765443
No 45
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.85 E-value=2e-20 Score=189.15 Aligned_cols=201 Identities=20% Similarity=0.189 Sum_probs=145.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..++|+|||||+||++||..|++.+ .+|+|||+++.+||.+.+ ...|++....++..++..++++.+++++.++.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g--~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~ 449 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARG--HQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVT 449 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHHcCCEEEeCcEec
Confidence 4689999999999999999999987 999999999888888765 3457665555666777777888899999887653
Q ss_pred eEEeccccee-ccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHH
Q 019876 97 SSVSLSELRQ-LYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVA 175 (334)
Q Consensus 97 ~~v~~~~~~~-~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A 175 (334)
. ... .||+||||||+ .|+.|++||.+..++++..+++. . ....+++|+|||||++|+|+|
T Consensus 450 ~------~~~~~~d~lviAtG~-~p~~~~i~G~~~~~v~~~~~~l~---~---------~~~~~~~VvVIGgG~~g~E~A 510 (671)
T 1ps9_A 450 A------DQLQAFDETILASGI-VPRTPPIDGIDHPKVLSYLDVLR---D---------KAPVGNKVAIIGCGGIGFDTA 510 (671)
T ss_dssp S------SSSCCSSEEEECCCE-EECCCCCBTTTSTTEEEHHHHHT---S---------CCCCCSEEEEECCHHHHHHHH
T ss_pred H------HHhhcCCEEEEccCC-CcCCCCCCCCCCCcEeeHHHHhh---C---------CCCCCCeEEEECCChhHHHHH
Confidence 2 123 89999999999 69999999988778887655442 1 123689999999999999999
Q ss_pred HHHccCCcccccccccHHHHHHH------------------hcCCcceEEEEeecCcccc----CCCHHHHHHHHcCCce
Q 019876 176 RILLRPTEELATTDIASYAWTAL------------------EGSSIRKVYLVGRRGPVQA----ACTAKELREILGIKNL 233 (334)
Q Consensus 176 ~~L~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~Vtiv~r~~~~~~----~~~~~~~~~~l~~~gv 233 (334)
..|++...+... ....+...+ -.....+|+++++.+..+. +.....+.+.|+..||
T Consensus 511 ~~l~~~G~~vtv--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV 588 (671)
T 1ps9_A 511 MYLSQPGESTSQ--NIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGV 588 (671)
T ss_dssp HHHTCCSSCGGG--CHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTC
T ss_pred HHHHhcCCCccc--chhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCC
Confidence 999974432210 000000000 0012257999998765432 2234566788888999
Q ss_pred EEEEccCc
Q 019876 234 YVHIREDD 241 (334)
Q Consensus 234 ~~~~~~~~ 241 (334)
+++.+...
T Consensus 589 ~v~~~~~v 596 (671)
T 1ps9_A 589 KMIPGVSY 596 (671)
T ss_dssp EEECSCEE
T ss_pred EEEeCcEE
Confidence 99987643
No 46
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.85 E-value=6.9e-21 Score=188.76 Aligned_cols=193 Identities=15% Similarity=0.153 Sum_probs=134.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc---CCCC-cchh-HHHHHHHHHhhcCCcEEEeCe
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDH-PETK-IVINQFSRVVQHERCSFFGNV 93 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~---~p~~-~~~~-~~~~~~~~~~~~~~i~~~~~~ 93 (334)
+++|+|||||+||++||..|++.+++.+|+|||+++.++. ...++ .++. .... .+..+...+.++.+++++.+.
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 79 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF-ANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVRVKH 79 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-CGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEETTE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc-cccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEEECC
Confidence 3699999999999999999999976799999999987541 11111 0111 1111 122333444455789988877
Q ss_pred EEc------eEEeccc---c---eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHH--hcCCCCCCCCCCCCCCC
Q 019876 94 TLG------SSVSLSE---L---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKST 159 (334)
Q Consensus 94 ~v~------~~v~~~~---~---~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~ 159 (334)
.+. ..+.+.+ + .+.||+||||||+ .|+.|++||.+.+++++..++... +.... ....+
T Consensus 80 ~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~-~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~-------~~~~~ 151 (565)
T 3ntd_A 80 EVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA-APIVPPIPGVDNPLTHSLRNIPDMDRILQTI-------QMNNV 151 (565)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCTTCCSTTEECCSSHHHHHHHHHHH-------HHTTC
T ss_pred EEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC-CCCCCCCCCCCCCCEEEeCCHHHHHHHHHHH-------hhCCC
Confidence 663 2233322 2 4589999999999 699999999987777765543321 11000 00256
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCH---HHHHHHHcCCceEEE
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTA---KELREILGIKNLYVH 236 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~---~~~~~~l~~~gv~~~ 236 (334)
++|+|||+|++|+|+|..|++ .|. +|++++|++.++..++. ..+.+.++..||+++
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~ 210 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH--------------------LGI-KTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLR 210 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh--------------------cCC-cEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEE
Confidence 899999999999999999986 565 69999999988887665 456677888999999
Q ss_pred EccCc
Q 019876 237 IREDD 241 (334)
Q Consensus 237 ~~~~~ 241 (334)
++...
T Consensus 211 ~~~~v 215 (565)
T 3ntd_A 211 LGTAL 215 (565)
T ss_dssp ETCCE
T ss_pred eCCeE
Confidence 87543
No 47
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.85 E-value=1.1e-20 Score=197.93 Aligned_cols=202 Identities=19% Similarity=0.201 Sum_probs=145.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc---cCCCCcchhHHHHHHHHHhhc-CCcEEEeCeE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG---VAPDHPETKIVINQFSRVVQH-ERCSFFGNVT 94 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~---~~p~~~~~~~~~~~~~~~~~~-~~i~~~~~~~ 94 (334)
.++|+||||||||++||.+|++.+ ++|+|||+++.+||.+.+. ..++. ...+....+.+.+.. .+++++.++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G--~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSG--ARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 468999999999999999999987 9999999998888877641 11221 123444444444444 4899888765
Q ss_pred EceE---------------Eec--------cc-ceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCC
Q 019876 95 LGSS---------------VSL--------SE-LRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGK 150 (334)
Q Consensus 95 v~~~---------------v~~--------~~-~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~ 150 (334)
+... +.+ .+ ..+.||+||||||+ .|+.|++||.+.+++++..++...+....
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs-~p~~~~ipG~~~~gv~~~~~~~~~l~~~~--- 280 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGA-HERPIVFENNDRPGIMLAGAVRSYLNRYG--- 280 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE-EECCCCCBTCCSTTEEEHHHHHHHHHTTC---
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCC-ccCCCCCCCCCCCCEEEhHHHHHHHHhcC---
Confidence 4210 011 11 13589999999999 58999999999999998876654333211
Q ss_pred CCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcC
Q 019876 151 NLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGI 230 (334)
Q Consensus 151 ~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~ 230 (334)
...+++|+|||+|++|+|+|..|++ .|.+ |+|+++++.+...
T Consensus 281 -----~~~gk~vvViGgG~~g~E~A~~L~~--------------------~G~~-Vtvv~~~~~~~~~------------ 322 (965)
T 2gag_A 281 -----VRAGARIAVATTNDSAYELVRELAA--------------------TGGV-VAVIDARSSISAA------------ 322 (965)
T ss_dssp -----EESCSSEEEEESSTTHHHHHHHHGG--------------------GTCC-SEEEESCSSCCHH------------
T ss_pred -----CCCCCeEEEEcCCHHHHHHHHHHHH--------------------cCCc-EEEEECCCccchh------------
Confidence 1257899999999999999999996 6775 9999998765310
Q ss_pred CceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEE
Q 019876 231 KNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (334)
Q Consensus 231 ~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~ 310 (334)
.+.+ .+.||+|++++.+++|. +++++++++|.+.
T Consensus 323 -------------------------------~~~l-------------~~~GV~v~~~~~v~~i~--~~~~~~v~~v~~~ 356 (965)
T 2gag_A 323 -------------------------------AAQA-------------VADGVQVISGSVVVDTE--ADENGELSAIVVA 356 (965)
T ss_dssp -------------------------------HHHH-------------HHTTCCEEETEEEEEEE--ECTTSCEEEEEEE
T ss_pred -------------------------------HHHH-------------HhCCeEEEeCCEeEEEe--ccCCCCEEEEEEE
Confidence 0111 14589999999999998 5115678888887
Q ss_pred E
Q 019876 311 K 311 (334)
Q Consensus 311 ~ 311 (334)
+
T Consensus 357 ~ 357 (965)
T 2gag_A 357 E 357 (965)
T ss_dssp E
T ss_pred e
Confidence 5
No 48
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.85 E-value=6.7e-20 Score=168.45 Aligned_cols=159 Identities=18% Similarity=0.170 Sum_probs=113.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc----cCCCC--cchhHHHHHHHHHhhcCCcEEEeC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG----VAPDH--PETKIVINQFSRVVQHERCSFFGN 92 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~----~~p~~--~~~~~~~~~~~~~~~~~~i~~~~~ 92 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+. .+||.+.+. ..|++ ....++..++.+.+.+.+++++..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g--~~v~lie~~-~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 92 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSG--FSVAILDKA-VAGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGV 92 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-STTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETC
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CcEEEEeCC-CCCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEe
Confidence 468999999999999999999987 899999995 566665431 12332 223466777777888889988775
Q ss_pred eEEce-------EEecccceeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCCCCeE
Q 019876 93 VTLGS-------SVSLSELRQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTA 162 (334)
Q Consensus 93 ~~v~~-------~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~v 162 (334)
..... .+..++..+.||+||+|||+ .|+.|++||.+. .+++....... ....+++|
T Consensus 93 ~v~~i~~~~~~~~v~~~~~~~~~~~li~AtG~-~~~~~~i~g~~~~~~~~~~~~~~~~~-------------~~~~~~~v 158 (319)
T 3cty_A 93 EVRSIKKTQGGFDIETNDDTYHAKYVIITTGT-THKHLGVKGESEYFGKGTSYCSTCDG-------------YLFKGKRV 158 (319)
T ss_dssp CEEEEEEETTEEEEEESSSEEEEEEEEECCCE-EECCCCCBTTTTTBTTTEESCHHHHG-------------GGGBTSEE
T ss_pred eEEEEEEeCCEEEEEECCCEEEeCEEEECCCC-CcccCCCCChHHhCCceEEEEEecch-------------hhcCCCeE
Confidence 43221 23333345689999999999 588888888642 34433222111 01257999
Q ss_pred EEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 163 VILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 163 vVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+|||+|.+|+|+|..|++ .+ .+|++++|++.+
T Consensus 159 ~viG~G~~g~e~a~~l~~--------------------~g-~~V~~i~~~~~~ 190 (319)
T 3cty_A 159 VTIGGGNSGAIAAISMSE--------------------YV-KNVTIIEYMPKY 190 (319)
T ss_dssp EEECCSHHHHHHHHHHTT--------------------TB-SEEEEECSSSSC
T ss_pred EEECCCHHHHHHHHHHHh--------------------hC-CcEEEEEcCCcc
Confidence 999999999999999996 45 479999998754
No 49
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.85 E-value=8.5e-21 Score=183.86 Aligned_cols=162 Identities=17% Similarity=0.222 Sum_probs=114.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCC--------------------------cch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH--------------------------PET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~--------------------------~~~ 71 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+ +.+||.|.+ ++.|.+ ...
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G--~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALG--KKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTT--CCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCH
Confidence 479999999999999999999997 99999999 567775432 322211 011
Q ss_pred h-----------HHHHHHHHHhhcCCcEEEeCeEE---ceEEec--ccceeccCeEEEeccCCCCC-CCCCCCccCCCcc
Q 019876 72 K-----------IVINQFSRVVQHERCSFFGNVTL---GSSVSL--SELRQLYHVVVLAYGAESDR-ALGIPGEDLIGVH 134 (334)
Q Consensus 72 ~-----------~~~~~~~~~~~~~~i~~~~~~~v---~~~v~~--~~~~~~yd~lIlATGs~~p~-~~~ipG~~~~~v~ 134 (334)
. .+...+..++...+++++.+... ...+.+ +...+.||++|+|||+ .|. .|++||.+ .++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~-~p~~~p~i~G~~--~~~ 158 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGG-HPSPHDALPGHE--LCI 158 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCE-EECCCTTSTTGG--GCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCC-CcccCCCCCCcc--ccc
Confidence 1 22233445556678998877543 123444 3334689999999999 588 88999875 244
Q ss_pred chhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 135 SAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
+..++.. .. ..+++++|||+|++|+|+|..|.+ .|. +|+++++.+.
T Consensus 159 ~~~~~~~----~~---------~~~~~v~ViGgG~~g~e~A~~l~~--------------------~g~-~Vt~v~~~~~ 204 (463)
T 4dna_A 159 TSNEAFD----LP---------ALPESILIAGGGYIAVEFANIFHG--------------------LGV-KTTLIYRGKE 204 (463)
T ss_dssp CHHHHTT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSS
T ss_pred cHHHHhh----hh---------cCCCeEEEECCCHHHHHHHHHHHH--------------------cCC-eEEEEEcCCc
Confidence 4443321 11 147899999999999999999986 565 6999999987
Q ss_pred cccCCC
Q 019876 215 VQAACT 220 (334)
Q Consensus 215 ~~~~~~ 220 (334)
++..++
T Consensus 205 ~l~~~~ 210 (463)
T 4dna_A 205 ILSRFD 210 (463)
T ss_dssp SSTTSC
T ss_pred cccccC
Confidence 764443
No 50
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.84 E-value=1.5e-20 Score=182.15 Aligned_cols=162 Identities=16% Similarity=0.219 Sum_probs=112.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc-cccCCCCc-------------------------chh
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDHP-------------------------ETK 72 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~-~~~~p~~~-------------------------~~~ 72 (334)
.++|+|||||+||++||..|++.+ .+|+|||+++ .||.|. .++.|.+. ...
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g--~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLG--LKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHH
Confidence 478999999999999999999987 8999999987 666542 24333211 111
Q ss_pred HHHH-----------HHHHHhhcCCcEEEeCeEEc---eEEecccceeccCeEEEeccCCCCCCCC-CCCccCCCccchh
Q 019876 73 IVIN-----------QFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALG-IPGEDLIGVHSAR 137 (334)
Q Consensus 73 ~~~~-----------~~~~~~~~~~i~~~~~~~v~---~~v~~~~~~~~yd~lIlATGs~~p~~~~-ipG~~~~~v~~~~ 137 (334)
.+.. .+..++++.+++++.+..+. ..+.+....+.||+||||||+ .|+.|+ +||. ..+++..
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g~~~~~d~lViATGs-~p~~p~gi~~~--~~v~~~~ 159 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGGERYGAKSLILATGS-EPLELKGFPFG--EDVWDST 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTEEEEEEEEEECCCE-EECCBTTBCCS--SSEECHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEccEEEEeCEEEEcCCC-CCCCCCCCCCC--CcEEcHH
Confidence 1111 12345666799998886542 234443334689999999999 587775 7762 2466554
Q ss_pred hHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcccc
Q 019876 138 EFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (334)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~ 217 (334)
++.. ..+ ..+++++|||+|++|+|+|..|++ .|. +|+++++.+.++.
T Consensus 160 ~~~~----l~~--------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 160 RALK----VEE--------GLPKRLLVIGGGAVGLELGQVYRR--------------------LGA-EVTLIEYMPEILP 206 (464)
T ss_dssp HHTC----GGG--------CCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSSST
T ss_pred HHHh----hhh--------hcCCEEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEEcCCcccc
Confidence 4431 100 035899999999999999999986 675 6999999987764
Q ss_pred CC
Q 019876 218 AC 219 (334)
Q Consensus 218 ~~ 219 (334)
.+
T Consensus 207 ~~ 208 (464)
T 2eq6_A 207 QG 208 (464)
T ss_dssp TS
T ss_pred cc
Confidence 33
No 51
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=1.5e-21 Score=183.74 Aligned_cols=187 Identities=19% Similarity=0.233 Sum_probs=127.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc---ccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG---LVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg---~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
..+++||||||||++||..|++.+ +|+|||+++.++- .+.. ...+....+++..+..+++++.+++++.++.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g---~V~lie~~~~~~~~~~~l~~-~~~g~~~~~~~~~~~~~~~~~~~v~~~~g~~v 83 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY---EVTVIDKEPVPYYSKPMLSH-YIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEA 83 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS---EEEEECSSSSCCCCSTTHHH-HHTTSSCGGGGCSSCHHHHHHHTEEEECSCCE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC---CEEEEECCCCCccccchhHH-HHhCCCCHHHhccCCHHHHHhCCcEEEECCEE
Confidence 469999999999999999998874 9999999875321 1111 11122222333333445566778999888543
Q ss_pred c------eEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCH
Q 019876 96 G------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGN 169 (334)
Q Consensus 96 ~------~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~ 169 (334)
. ..+..+..++.||+||||||+ .|+.|++|| .+++++..++..... . ...+..+++++|||+|+
T Consensus 84 ~~id~~~~~V~~~g~~~~~d~lViATGs-~p~~p~i~G--~~~v~~~~~~~~~~~-l------~~~~~~~~~vvViGgG~ 153 (367)
T 1xhc_A 84 KLIDRGRKVVITEKGEVPYDTLVLATGA-RAREPQIKG--KEYLLTLRTIFDADR-I------KESIENSGEAIIIGGGF 153 (367)
T ss_dssp EEEETTTTEEEESSCEEECSEEEECCCE-EECCCCSBT--GGGEECCCSHHHHHH-H------HHHHHHHSEEEEEECSH
T ss_pred EEEECCCCEEEECCcEEECCEEEECCCC-CCCCCCCCC--cCCEEEEcCHHHHHH-H------HHHhhcCCcEEEECCCH
Confidence 2 134422334689999999999 688899998 345665433322110 0 00011358999999999
Q ss_pred HHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCH---HHHHHHHcCCceEEEEccCc
Q 019876 170 VALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTA---KELREILGIKNLYVHIREDD 241 (334)
Q Consensus 170 ~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~---~~~~~~l~~~gv~~~~~~~~ 241 (334)
+|+|+|..|++ .|. +||+++|.+.++. +++ +.+.+.|+..||+++++...
T Consensus 154 ~g~E~A~~l~~--------------------~g~-~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i~~~~~v 206 (367)
T 1xhc_A 154 IGLELAGNLAE--------------------AGY-HVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKFFLNSEL 206 (367)
T ss_dssp HHHHHHHHHHH--------------------TTC-EEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEEECSCCE
T ss_pred HHHHHHHHHHh--------------------CCC-EEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEEEcCCEE
Confidence 99999999986 675 6999999988877 665 45677788899999987543
No 52
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.84 E-value=2.1e-20 Score=178.26 Aligned_cols=165 Identities=20% Similarity=0.240 Sum_probs=114.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc-ccccc--ccCCCCcchhHHHHHHHHHhhcCCcEEEeCeE
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF-GLVRS--GVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g-g~~~~--~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (334)
..++|+|||||+||+++|..|++.+++.+|+|||+++..+ ..+.. .+..+.. .+.+ .+. ++++.+++++.++.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~~v~~~~~~~ 81 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKI--RLD-CKRAPEVEWLLGVT 81 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGS--BCC-CTTSCSCEEEETCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhh--hHH-HHHHCCCEEEcCCE
Confidence 4579999999999999999999998555799999987532 11110 0000000 0000 011 45677899988864
Q ss_pred Ec------eEEecccc-eeccCeEEEeccCCCCCCCCC-CCccCCCccchhhHHHH--hcCCCCCCCCCCCCCCCCeEEE
Q 019876 95 LG------SSVSLSEL-RQLYHVVVLAYGAESDRALGI-PGEDLIGVHSAREFVWW--YNGHPDGKNLSPDLKSTDTAVI 164 (334)
Q Consensus 95 v~------~~v~~~~~-~~~yd~lIlATGs~~p~~~~i-pG~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~k~vvV 164 (334)
+. ..+.+.++ .+.||+||+|||+ .|+.|++ ||.+ +++++.++.... +.. .+..+++|+|
T Consensus 82 v~~i~~~~~~v~~~~g~~~~~d~lviAtG~-~~~~~~i~~G~~-~~v~~~~~~~~~~~l~~---------~~~~~~~vvV 150 (408)
T 2gqw_A 82 AQSFDPQAHTVALSDGRTLPYGTLVLATGA-APRALPTLQGAT-MPVHTLRTLEDARRIQA---------GLRPQSRLLI 150 (408)
T ss_dssp EEEEETTTTEEEETTSCEEECSEEEECCCE-EECCCGGGTTCS-SCEEECCSHHHHHHHHT---------TCCTTCEEEE
T ss_pred EEEEECCCCEEEECCCCEEECCEEEECCCC-CCCCCCccCCCC-CcEEEECCHHHHHHHHH---------HhhcCCeEEE
Confidence 32 23555444 4689999999999 5888899 9987 777654433221 111 1335799999
Q ss_pred EcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccC
Q 019876 165 LGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAA 218 (334)
Q Consensus 165 IG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~ 218 (334)
||+|++|+|+|..|++ .|. +||++++.+.++..
T Consensus 151 iGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 151 VGGGVIGLELAATART--------------------AGV-HVSLVETQPRLMSR 183 (408)
T ss_dssp ECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSSSSSTT
T ss_pred ECCCHHHHHHHHHHHh--------------------CCC-EEEEEEeCCccccc
Confidence 9999999999999986 565 69999999887654
No 53
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.84 E-value=5.7e-21 Score=183.82 Aligned_cols=187 Identities=16% Similarity=0.231 Sum_probs=128.0
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc---cccc---ccCCCCcchhHHHHHHHHHhhcCCcEEEeCe
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG---LVRS---GVAPDHPETKIVINQFSRVVQHERCSFFGNV 93 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg---~~~~---~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (334)
.|||||||||||++||..|++.+++.+|+|||+++..+. .+.+ +..... ...+......++++.+++++.+.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDR--RYALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCG--GGTBCCCHHHHHHHHCCEEEETE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccch--hhhhhcCHHHHHHhcCCEEEeCC
Confidence 479999999999999999999987889999999876432 1111 111110 00111122345566789988876
Q ss_pred EEc------eEEecc------cceeccCeEEEeccCCCCCCCCCCCccCC---CccchhhHHHHhcCCCCCCCCCCCCCC
Q 019876 94 TLG------SSVSLS------ELRQLYHVVVLAYGAESDRALGIPGEDLI---GVHSAREFVWWYNGHPDGKNLSPDLKS 158 (334)
Q Consensus 94 ~v~------~~v~~~------~~~~~yd~lIlATGs~~p~~~~ipG~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
.+. +.+.+. ..+..||+||||||+ .|+.|++||.... ++.++..+..... ...
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs-~p~~p~i~g~~~~~~~~~~~~~~l~~~~~-----------~~~ 146 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA-SANSLGFESDITFTLRNLEDTDAIDQFIK-----------ANQ 146 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE-EECCCCCCCTTEECCSSHHHHHHHHHHHH-----------HHT
T ss_pred eEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC-ccccccccCceEEeeccHHHHHHHHHhhh-----------ccC
Confidence 542 122221 123589999999999 5888888885421 1111111111111 014
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCH---HHHHHHHcCCceEE
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTA---KELREILGIKNLYV 235 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~---~~~~~~l~~~gv~~ 235 (334)
+++++|||||++|+|+|..+++ .|. +||+++|+++++..+++ +.+.+.++..||++
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~--------------------~g~-~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV~i 205 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYE--------------------RGL-HPTLIHRSDKINKLMDADMNQPILDELDKREIPY 205 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--------------------HTC-EEEEEESSSCCSTTSCGGGGHHHHHHHHHTTCCE
T ss_pred CcEEEEECCccchhhhHHHHHh--------------------cCC-cceeeeeeccccccccchhHHHHHHHhhccceEE
Confidence 6899999999999999999986 565 69999999999887776 67888889999999
Q ss_pred EEccCc
Q 019876 236 HIREDD 241 (334)
Q Consensus 236 ~~~~~~ 241 (334)
+++...
T Consensus 206 ~~~~~v 211 (437)
T 4eqs_A 206 RLNEEI 211 (437)
T ss_dssp EESCCE
T ss_pred EeccEE
Confidence 987654
No 54
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.84 E-value=2.9e-20 Score=180.68 Aligned_cols=166 Identities=15% Similarity=0.205 Sum_probs=115.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC------Ccccccc-ccCCCCc---------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT------PFGLVRS-GVAPDHP--------------------- 69 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~------~gg~~~~-~~~p~~~--------------------- 69 (334)
..++|+|||||++|++||..|++.+ .+|+|||+++. .||.|.+ ++.|.+.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLG--LKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHT--CCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCC--CEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 3579999999999999999999997 99999999863 3443321 2222110
Q ss_pred ------chh-----------HHHHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCCC
Q 019876 70 ------ETK-----------IVINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALG 124 (334)
Q Consensus 70 ------~~~-----------~~~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~~ 124 (334)
... .+...+...++..+++++.+.... ..+...++ .+.||+||||||+ .|..|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~-~p~~~~ 158 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGS-KPVEIP 158 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCE-EECCCT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCC-CCCCCC
Confidence 011 111222344556789988876542 23333333 4689999999999 587776
Q ss_pred CCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcc
Q 019876 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (334)
Q Consensus 125 ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (334)
.++.+...+++..++.. .. ..+++|+|||+|++|+|+|..|.+ .|.
T Consensus 159 ~~~~~~~~v~~~~~~~~----~~---------~~~~~v~ViGgG~~g~e~A~~l~~--------------------~g~- 204 (476)
T 3lad_A 159 PAPVDQDVIVDSTGALD----FQ---------NVPGKLGVIGAGVIGLELGSVWAR--------------------LGA- 204 (476)
T ss_dssp TSCCCSSSEEEHHHHTS----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-
T ss_pred CCCCCcccEEechhhhc----cc---------cCCCeEEEECCCHHHHHHHHHHHH--------------------cCC-
Confidence 66666667776654431 11 256899999999999999999986 565
Q ss_pred eEEEEeecCccccCCC
Q 019876 205 KVYLVGRRGPVQAACT 220 (334)
Q Consensus 205 ~Vtiv~r~~~~~~~~~ 220 (334)
+|++++|.+.++..++
T Consensus 205 ~Vtlv~~~~~~l~~~~ 220 (476)
T 3lad_A 205 EVTVLEAMDKFLPAVD 220 (476)
T ss_dssp EEEEEESSSSSSTTSC
T ss_pred cEEEEecCCCcCcccC
Confidence 6999999988765444
No 55
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.84 E-value=1.6e-20 Score=181.96 Aligned_cols=163 Identities=16% Similarity=0.201 Sum_probs=114.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc-cccCCCCc--------------------------ch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDHP--------------------------ET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~-~~~~p~~~--------------------------~~ 71 (334)
.++|+|||||+||+++|..|++.+ .+|+|||++ ..||.+. .++.|.+. ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G--~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLG--LSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 368999999999999999999997 999999998 5565442 23222210 01
Q ss_pred hH-----------HHHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCCCCCCccCCC
Q 019876 72 KI-----------VINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGEDLIG 132 (334)
Q Consensus 72 ~~-----------~~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~~ipG~~~~~ 132 (334)
.. +...+.+.+++.+++++.++.+. ..+...++ .+.||+||+|||+ .|+.|+++|.+..
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~-~~~~~~~~g~~~~- 157 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGS-STRLVPGTSLSAN- 157 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCE-EECCCTTCCCBTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCC-CCCCCCCCCCCce-
Confidence 11 11223455666789998876542 12333333 4689999999999 5888888886543
Q ss_pred ccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeec
Q 019876 133 VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (334)
Q Consensus 133 v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~ 212 (334)
+++..++.. .. ..+++|+|||+|++|+|+|..|++ .|. +||+++|+
T Consensus 158 ~~~~~~~~~----~~---------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g~-~Vtlv~~~ 203 (464)
T 2a8x_A 158 VVTYEEQIL----SR---------ELPKSIIIAGAGAIGMEFGYVLKN--------------------YGV-DVTIVEFL 203 (464)
T ss_dssp EECHHHHHT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSS
T ss_pred EEecHHHhh----cc---------ccCCeEEEECCcHHHHHHHHHHHH--------------------cCC-eEEEEEcC
Confidence 555544331 11 146899999999999999999986 675 69999999
Q ss_pred CccccCCC
Q 019876 213 GPVQAACT 220 (334)
Q Consensus 213 ~~~~~~~~ 220 (334)
+++++.++
T Consensus 204 ~~~l~~~~ 211 (464)
T 2a8x_A 204 PRALPNED 211 (464)
T ss_dssp SSSSTTSC
T ss_pred CccccccC
Confidence 88765443
No 56
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.84 E-value=1.1e-20 Score=184.64 Aligned_cols=165 Identities=18% Similarity=0.177 Sum_probs=117.7
Q ss_pred CeEEEECCchHHHHHHHHHhhcCC-CCeEEEEcCCCCCccccc-cccCCCC----------------------------c
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQ-EAQVDIIDRLPTPFGLVR-SGVAPDH----------------------------P 69 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~-~~~v~vie~~~~~gg~~~-~~~~p~~----------------------------~ 69 (334)
++|+|||||++|++||..|++..| +.+|+|||+++ +||.+. +++.|.+ .
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 689999999999999999999833 49999999987 666532 2222210 0
Q ss_pred chhH-----------HHHHHHHHhhcCCcEEEeCeEEc---------eE--Eecccc---eeccCeEEEeccCCCCCCCC
Q 019876 70 ETKI-----------VINQFSRVVQHERCSFFGNVTLG---------SS--VSLSEL---RQLYHVVVLAYGAESDRALG 124 (334)
Q Consensus 70 ~~~~-----------~~~~~~~~~~~~~i~~~~~~~v~---------~~--v~~~~~---~~~yd~lIlATGs~~p~~~~ 124 (334)
.... +...+.+++++.+++++.+.... .. +...++ ...||+||+|||+ .|..|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs-~p~~p~ 160 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGA-SPRILP 160 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCE-EECCCG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCC-CCCCCC
Confidence 1112 22234566677899998876431 22 222333 4689999999999 588889
Q ss_pred CCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcc
Q 019876 125 IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR 204 (334)
Q Consensus 125 ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (334)
+||.+..++++..++.. .. ..+++++|||+|++|+|+|..|.+ .|.
T Consensus 161 i~g~~~~~v~~~~~~~~----~~---------~~~~~vvViGgG~ig~E~A~~l~~--------------------~g~- 206 (499)
T 1xdi_A 161 SAQPDGERILTWRQLYD----LD---------ALPDHLIVVGSGVTGAEFVDAYTE--------------------LGV- 206 (499)
T ss_dssp GGCCCSSSEEEGGGGGG----CS---------SCCSSEEEESCSHHHHHHHHHHHH--------------------TTC-
T ss_pred CCCCCcCcEEehhHhhh----hh---------ccCCeEEEECCCHHHHHHHHHHHH--------------------cCC-
Confidence 99987667776655432 10 146899999999999999999986 565
Q ss_pred eEEEEeecCccccCCC
Q 019876 205 KVYLVGRRGPVQAACT 220 (334)
Q Consensus 205 ~Vtiv~r~~~~~~~~~ 220 (334)
+|+++++.+.++..++
T Consensus 207 ~Vtlv~~~~~~l~~~d 222 (499)
T 1xdi_A 207 PVTVVASQDHVLPYED 222 (499)
T ss_dssp CEEEECSSSSSSCCSS
T ss_pred eEEEEEcCCccccccC
Confidence 5999999988765543
No 57
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.84 E-value=1.2e-20 Score=182.98 Aligned_cols=184 Identities=21% Similarity=0.247 Sum_probs=130.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc---------------------chhHH--
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP---------------------ETKIV-- 74 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~---------------------~~~~~-- 74 (334)
.++|+||||||||++||..|++.+ .+|+|||+.+.+||.|.+ ++.|.+. ....+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G--~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAK--YNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQD 81 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCC--CeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHH
Confidence 369999999999999999999997 999999988888887654 4434211 11111
Q ss_pred --------H--HHHHHHhhcCCcEEEeCeEEc-----eEEecccc-e--eccCeEEEeccCCCCCCCCCCCccCCCccch
Q 019876 75 --------I--NQFSRVVQHERCSFFGNVTLG-----SSVSLSEL-R--QLYHVVVLAYGAESDRALGIPGEDLIGVHSA 136 (334)
Q Consensus 75 --------~--~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~-~--~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~ 136 (334)
. ..+...+++.+++++.+.... ..+...++ . +.||+||||||+ .|+.|++||.+ ++++.
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~--~~~t~ 158 (466)
T 3l8k_A 82 RKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGA-ETAKLRLPGVE--YCLTS 158 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCE-EECCCCCTTGG--GSBCH
T ss_pred HHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCC-CccCCCCCCcc--ceEeH
Confidence 1 344456677889988775431 12333332 3 689999999999 69999999987 67777
Q ss_pred hhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccc
Q 019876 137 REFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~ 216 (334)
.++....... ...+++++|||+|++|+|+|..|++ .|. +|++++|.+.++
T Consensus 159 ~~~~~~~~~l---------~~~~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l 208 (466)
T 3l8k_A 159 DDIFGYKTSF---------RKLPQDMVIIGAGYIGLEIASIFRL--------------------MGV-QTHIIEMLDRAL 208 (466)
T ss_dssp HHHHSTTCSC---------CSCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSSC
T ss_pred HHHHHHHHHH---------hhCCCeEEEECCCHHHHHHHHHHHH--------------------cCC-EEEEEEeCCcCC
Confidence 6655211111 1146899999999999999999986 565 699999999988
Q ss_pred cCC-CHH---HHHHHHcCCceEEEEccC
Q 019876 217 AAC-TAK---ELREILGIKNLYVHIRED 240 (334)
Q Consensus 217 ~~~-~~~---~~~~~l~~~gv~~~~~~~ 240 (334)
..+ ++. .+.+.++ |+++++..
T Consensus 209 ~~~~d~~~~~~l~~~l~---v~i~~~~~ 233 (466)
T 3l8k_A 209 ITLEDQDIVNTLLSILK---LNIKFNSP 233 (466)
T ss_dssp TTSCCHHHHHHHHHHHC---CCEECSCC
T ss_pred CCCCCHHHHHHHHhcCE---EEEEECCE
Confidence 887 542 2333333 77776544
No 58
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.84 E-value=3.1e-20 Score=181.15 Aligned_cols=164 Identities=21% Similarity=0.269 Sum_probs=111.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCcc--------------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPE-------------------------- 70 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~-------------------------- 70 (334)
..++|+||||||||++||..|++.+ .+|+|||+.+.+||.|.+ ++.|.+..
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 101 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLG--MKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKL 101 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCcc
Confidence 3478999999999999999999997 999999998888886533 33232110
Q ss_pred -hh-----------HHHHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCCCCCCcc-
Q 019876 71 -TK-----------IVINQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRALGIPGED- 129 (334)
Q Consensus 71 -~~-----------~~~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~~ipG~~- 129 (334)
.. .+...+...++..+++++.+.... ..+...++ .+.||+||||||+. | +++||.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~-p--~~ipg~~~ 178 (491)
T 3urh_A 102 NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSD-V--AGIPGVEV 178 (491)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEE-C--CCBTTBCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCC-C--CCCCCccc
Confidence 01 111223344566788888776531 12333333 46899999999994 4 3567764
Q ss_pred ---CCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceE
Q 019876 130 ---LIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKV 206 (334)
Q Consensus 130 ---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~V 206 (334)
...+++..++. .. ...+++|+|||+|++|+|+|..|++ .|. +|
T Consensus 179 ~~~~~~~~~~~~~~----~~---------~~~~~~vvViGgG~~g~E~A~~l~~--------------------~g~-~V 224 (491)
T 3urh_A 179 AFDEKTIVSSTGAL----AL---------EKVPASMIVVGGGVIGLELGSVWAR--------------------LGA-KV 224 (491)
T ss_dssp CCCSSSEECHHHHT----SC---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------HTC-EE
T ss_pred ccCCeeEEehhHhh----hh---------hhcCCeEEEECCCHHHHHHHHHHHH--------------------cCC-EE
Confidence 23344443322 11 1257999999999999999999986 565 69
Q ss_pred EEEeecCccccCCC
Q 019876 207 YLVGRRGPVQAACT 220 (334)
Q Consensus 207 tiv~r~~~~~~~~~ 220 (334)
+++++.+.++..++
T Consensus 225 tlv~~~~~~l~~~d 238 (491)
T 3urh_A 225 TVVEFLDTILGGMD 238 (491)
T ss_dssp EEECSSSSSSSSSC
T ss_pred EEEeccccccccCC
Confidence 99999988765544
No 59
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.84 E-value=2.7e-20 Score=181.29 Aligned_cols=203 Identities=16% Similarity=0.216 Sum_probs=134.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCC--------------------------cch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDH--------------------------PET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~--------------------------~~~ 71 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+++.+||.+.+ ++.|.+ ...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G--~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEG--LKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 478999999999999999999987 999999997777765422 222210 011
Q ss_pred hHHH-----------HHHHHHhhcCCcEEEeCeEEc---eEEec--cc-------------ceeccCeEEEeccCCCCCC
Q 019876 72 KIVI-----------NQFSRVVQHERCSFFGNVTLG---SSVSL--SE-------------LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 72 ~~~~-----------~~~~~~~~~~~i~~~~~~~v~---~~v~~--~~-------------~~~~yd~lIlATGs~~p~~ 122 (334)
..+. ..+...++..+++++.++.+. ..+.+ .+ ..+.||+||+|||++ |..
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~-p~~ 162 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSR-VTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEE-ECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCC-CCC
Confidence 1111 123345566789988776432 12222 22 246899999999994 777
Q ss_pred CC-CCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC
Q 019876 123 LG-IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (334)
Q Consensus 123 ~~-ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (334)
|+ +| .+. .+++..++.. .. ..+++++|||+|++|+|+|..|++ .
T Consensus 163 ~~~i~-~~~-~v~~~~~~~~----~~---------~~~~~vvViGgG~ig~E~A~~l~~--------------------~ 207 (482)
T 1ojt_A 163 LPFIP-EDP-RIIDSSGALA----LK---------EVPGKLLIIGGGIIGLEMGTVYST--------------------L 207 (482)
T ss_dssp CSSCC-CCT-TEECHHHHTT----CC---------CCCSEEEEESCSHHHHHHHHHHHH--------------------H
T ss_pred CCCCC-ccC-cEEcHHHHhc----cc---------ccCCeEEEECCCHHHHHHHHHHHH--------------------c
Confidence 76 66 332 4555544331 11 147899999999999999999986 5
Q ss_pred CcceEEEEeecCccccCCCHHHHHHHHcCCceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCce
Q 019876 202 SIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQR 281 (334)
Q Consensus 202 ~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (334)
|. +||+++|.+.++..+++. + .+.+++.+ .+.
T Consensus 208 G~-~Vtlv~~~~~~l~~~~~~-~-------------------------------------~~~l~~~l---------~~~ 239 (482)
T 1ojt_A 208 GS-RLDVVEMMDGLMQGADRD-L-------------------------------------VKVWQKQN---------EYR 239 (482)
T ss_dssp TC-EEEEECSSSSSSTTSCHH-H-------------------------------------HHHHHHHH---------GGG
T ss_pred CC-eEEEEEECCccccccCHH-H-------------------------------------HHHHHHHH---------Hhc
Confidence 65 699999998876544321 1 12233333 267
Q ss_pred EEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 282 ELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 282 gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
||+|++++.+++|. + ++....|.+.+
T Consensus 240 gV~i~~~~~v~~i~--~--~~~~~~v~~~~ 265 (482)
T 1ojt_A 240 FDNIMVNTKTVAVE--P--KEDGVYVTFEG 265 (482)
T ss_dssp EEEEECSCEEEEEE--E--ETTEEEEEEES
T ss_pred CCEEEECCEEEEEE--E--cCCeEEEEEec
Confidence 99999999999997 4 23334555553
No 60
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.84 E-value=2.8e-20 Score=189.69 Aligned_cols=185 Identities=19% Similarity=0.131 Sum_probs=137.6
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCcchhHHHHHHHHHhhc------CCcEE
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQH------ERCSF 89 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~~~~~~~~~~~~~~~------~~i~~ 89 (334)
...++|+||||||||++||.+|++.+ ++|+|||+++.+||.+.+ ...|++.....+..++...++. .++++
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G--~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i 464 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESG--YTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLA 464 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEE
Confidence 35689999999999999999999997 999999999999998876 4456655444444444333332 25666
Q ss_pred EeCeEEceEEecccc-eeccCeEEEeccCCC-------CCCCCCCCcc--CCCccchhhHHHHhcCCCCCCCCCCCCCCC
Q 019876 90 FGNVTLGSSVSLSEL-RQLYHVVVLAYGAES-------DRALGIPGED--LIGVHSAREFVWWYNGHPDGKNLSPDLKST 159 (334)
Q Consensus 90 ~~~~~v~~~v~~~~~-~~~yd~lIlATGs~~-------p~~~~ipG~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (334)
..+. .++.+++ ...||+||||||+.. |..|++||.+ .+++++..+++. .. ...+
T Consensus 465 ~~~~----~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~---~~---------~~~g 528 (729)
T 1o94_A 465 LGQK----PMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD---GK---------KKIG 528 (729)
T ss_dssp CSCC----CCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH---CC---------SCCC
T ss_pred EeCe----EEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc---CC---------CCCC
Confidence 5443 2334443 358999999999941 4667899987 678888777653 11 2367
Q ss_pred CeEEEEc--CCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcccc----CCCHHHHHHHHcCCce
Q 019876 160 DTAVILG--QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA----ACTAKELREILGIKNL 233 (334)
Q Consensus 160 k~vvVIG--~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~----~~~~~~~~~~l~~~gv 233 (334)
++|+||| ||++|+|+|..|++ .|. +||+++|++ +.. +...+.+.+.|+..||
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~--------------------~G~-~Vtlv~~~~-l~~~~~~~~~~~~~~~~l~~~GV 586 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLAT--------------------AGH-EVTIVSGVH-LANYMHFTLEYPNMMRRLHELHV 586 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHH--------------------TTC-EEEEEESSC-TTHHHHHTTCHHHHHHHHHHTTC
T ss_pred CeEEEEcCCCCchHHHHHHHHHH--------------------cCC-EEEEEeccc-ccccccccccHHHHHHHHHhCCC
Confidence 9999999 99999999999996 676 699999988 533 2235778888889999
Q ss_pred EEEEccCc
Q 019876 234 YVHIREDD 241 (334)
Q Consensus 234 ~~~~~~~~ 241 (334)
+++++...
T Consensus 587 ~i~~~~~v 594 (729)
T 1o94_A 587 EELGDHFC 594 (729)
T ss_dssp EEECSEEE
T ss_pred EEEcCcEE
Confidence 99987543
No 61
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.84 E-value=6.8e-20 Score=171.31 Aligned_cols=203 Identities=20% Similarity=0.212 Sum_probs=139.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc-------CCCCc--chhHHHHHHHHHhhcCCcEE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------APDHP--ETKIVINQFSRVVQHERCSF 89 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~-------~p~~~--~~~~~~~~~~~~~~~~~i~~ 89 (334)
.++|+|||||++|+++|.+|++.+ .+|+|||+.+.+||.+..-. .|.++ ...++..++.+.+...++++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 91 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNN--ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDV 91 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEE
Confidence 579999999999999999999986 99999999988887664211 12222 23567777888888888998
Q ss_pred EeCeEEce---------EEecccc-eeccCeEEEeccCC--CCCCCCCCC-cc-CC--CccchhhHHHHhcCCCCCCCCC
Q 019876 90 FGNVTLGS---------SVSLSEL-RQLYHVVVLAYGAE--SDRALGIPG-ED-LI--GVHSAREFVWWYNGHPDGKNLS 153 (334)
Q Consensus 90 ~~~~~v~~---------~v~~~~~-~~~yd~lIlATGs~--~p~~~~ipG-~~-~~--~v~~~~~~~~~~~~~~~~~~~~ 153 (334)
+.+..+.. .+.+.++ .+.||+||+|||+. .|..+++|| .+ .. +++.. ..+.
T Consensus 92 ~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~---------~~~~---- 158 (360)
T 3ab1_A 92 VLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYA---------VKSV---- 158 (360)
T ss_dssp ECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESS---------CSCG----
T ss_pred EcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEe---------cCCH----
Confidence 87754421 2333333 46899999999984 266667777 43 11 12211 0010
Q ss_pred CCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCce
Q 019876 154 PDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNL 233 (334)
Q Consensus 154 ~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv 233 (334)
....+++|+|||+|++|+|+|..|.+ .+. +|++++|++.+... + .+.
T Consensus 159 -~~~~~~~vvVvG~G~~g~e~A~~l~~--------------------~g~-~V~lv~~~~~~~~~--~-~~~-------- 205 (360)
T 3ab1_A 159 -EDFKGKRVVIVGGGDSALDWTVGLIK--------------------NAA-SVTLVHRGHEFQGH--G-KTA-------- 205 (360)
T ss_dssp -GGGTTCEEEEECSSHHHHHHHHHTTT--------------------TSS-EEEEECSSSSCSSC--S-HHH--------
T ss_pred -HHcCCCcEEEECCCHHHHHHHHHHHh--------------------cCC-EEEEEEcCCCCCCC--H-HHH--------
Confidence 01257999999999999999999986 454 79999998765311 0 000
Q ss_pred EEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEE
Q 019876 234 YVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFE 310 (334)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~ 310 (334)
+.+.+.. .+.||+|++++.+++|. + +++++.+|.+.
T Consensus 206 -----------------------------~~l~~~~---------~~~gv~i~~~~~v~~i~--~-~~~~v~~v~~~ 241 (360)
T 3ab1_A 206 -----------------------------HEVERAR---------ANGTIDVYLETEVASIE--E-SNGVLTRVHLR 241 (360)
T ss_dssp -----------------------------HSSHHHH---------HHTSEEEESSEEEEEEE--E-ETTEEEEEEEE
T ss_pred -----------------------------HHHHHHh---------hcCceEEEcCcCHHHhc--c-CCCceEEEEEE
Confidence 1111221 14589999999999998 5 35778788885
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.84 E-value=3.7e-20 Score=180.02 Aligned_cols=163 Identities=17% Similarity=0.237 Sum_probs=111.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc----------------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP---------------------------- 69 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~---------------------------- 69 (334)
.++|+||||||+|+++|..|++.+ .+|+|||+++.+||.+.+ ++.|.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G--~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLG--FNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCcc
Confidence 468999999999999999999997 899999998777776532 2222110
Q ss_pred chhHH-----------HHHHHHHhhcCCcEEEeCeEEc-----eEEecccc---e------eccCeEEEeccCCCCCCCC
Q 019876 70 ETKIV-----------INQFSRVVQHERCSFFGNVTLG-----SSVSLSEL---R------QLYHVVVLAYGAESDRALG 124 (334)
Q Consensus 70 ~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~------~~yd~lIlATGs~~p~~~~ 124 (334)
....+ ...+.+.+++.+++++.++.+. ..+...++ . +.||+||+|||+. |+ .
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~-p~--~ 159 (478)
T 1v59_A 83 NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSE-VT--P 159 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEE-EC--C
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCC-CC--C
Confidence 01111 1123345566789998887542 12333332 4 7899999999994 53 4
Q ss_pred CCCccCCC--ccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCC
Q 019876 125 IPGEDLIG--VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS 202 (334)
Q Consensus 125 ipG~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~ 202 (334)
+||.+..+ +++..++.. .. ..+++++|||+|++|+|+|..|++ .|
T Consensus 160 ~~g~~~~~~~v~~~~~~~~----~~---------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g 206 (478)
T 1v59_A 160 FPGIEIDEEKIVSSTGALS----LK---------EIPKRLTIIGGGIIGLEMGSVYSR--------------------LG 206 (478)
T ss_dssp CTTCCCCSSSEECHHHHTT----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------TT
T ss_pred CCCCCCCCceEEcHHHHHh----hh---------ccCceEEEECCCHHHHHHHHHHHH--------------------cC
Confidence 56654333 555443321 11 136899999999999999999986 67
Q ss_pred cceEEEEeecCccccCCC
Q 019876 203 IRKVYLVGRRGPVQAACT 220 (334)
Q Consensus 203 ~~~Vtiv~r~~~~~~~~~ 220 (334)
. +||+++|++.++..++
T Consensus 207 ~-~Vtlv~~~~~~l~~~~ 223 (478)
T 1v59_A 207 S-KVTVVEFQPQIGASMD 223 (478)
T ss_dssp C-EEEEECSSSSSSSSSC
T ss_pred C-EEEEEEeCCccccccC
Confidence 5 6999999988765443
No 63
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.83 E-value=9e-21 Score=186.54 Aligned_cols=164 Identities=17% Similarity=0.200 Sum_probs=110.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC--------CCccc-cccccCCCCcch-------------------
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP--------TPFGL-VRSGVAPDHPET------------------- 71 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~--------~~gg~-~~~~~~p~~~~~------------------- 71 (334)
++++|||+||||+.||..+++.| .+|+|||+.. .+||. ++.||.|.+.+.
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G--~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHG--ARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--CCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--CeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 79999999999999999999997 9999999643 25664 455776643211
Q ss_pred --------hHHH-----------HHHHHHhhcCCcEEEeCeEE---ceEEec-------ccceeccCeEEEeccCCCCCC
Q 019876 72 --------KIVI-----------NQFSRVVQHERCSFFGNVTL---GSSVSL-------SELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 72 --------~~~~-----------~~~~~~~~~~~i~~~~~~~v---~~~v~~-------~~~~~~yd~lIlATGs~~p~~ 122 (334)
..+. ..+...+++.+|+++.+... ..++.+ ....+.+|++|||||+ +|..
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs-~P~~ 199 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGC-RPHI 199 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCE-EECC
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCC-CCCC
Confidence 1111 11223455667877655432 112221 1223589999999999 5888
Q ss_pred CCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCC
Q 019876 123 LGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS 202 (334)
Q Consensus 123 ~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~ 202 (334)
|+.++.+...++++.+++. .. ..+++++|||||++|+|+|..+++ +|
T Consensus 200 P~~~~~~~~~~~ts~~~l~----l~---------~lP~~lvIIGgG~IGlE~A~~~~~--------------------lG 246 (542)
T 4b1b_A 200 PDDVEGAKELSITSDDIFS----LK---------KDPGKTLVVGASYVALECSGFLNS--------------------LG 246 (542)
T ss_dssp CSSSBTHHHHCBCHHHHTT----CS---------SCCCSEEEECCSHHHHHHHHHHHH--------------------HT
T ss_pred CCcccCCCccccCchhhhc----cc---------cCCceEEEECCCHHHHHHHHHHHh--------------------cC
Confidence 8665554445566665542 11 146899999999999999999996 78
Q ss_pred cceEEEEeecCccccCCCH
Q 019876 203 IRKVYLVGRRGPVQAACTA 221 (334)
Q Consensus 203 ~~~Vtiv~r~~~~~~~~~~ 221 (334)
.+ ||++.|. +++..+++
T Consensus 247 ~~-VTii~~~-~~L~~~D~ 263 (542)
T 4b1b_A 247 YD-VTVAVRS-IVLRGFDQ 263 (542)
T ss_dssp CC-EEEEESS-CSSTTSCH
T ss_pred Ce-EEEeccc-ccccccch
Confidence 74 9999874 55555543
No 64
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.83 E-value=4.4e-20 Score=187.23 Aligned_cols=186 Identities=16% Similarity=0.119 Sum_probs=148.0
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCcchhHHHHHHHHHhhcC-CcEEEeCeE
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHE-RCSFFGNVT 94 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 94 (334)
...++|+|||||+||++||.+|++.+ ++|+|||+++.+||.+.+ ...|++....++..++...+.+. +++++.++.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G--~~V~liE~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~gv~~~~~~~ 466 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRG--YDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESP 466 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTTEEEESSCC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCCCEEEECCe
Confidence 35689999999999999999999997 999999999999988766 34577777778888888888887 899988865
Q ss_pred EceEEecccc-eeccCeEEEeccCCC-------CCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEc
Q 019876 95 LGSSVSLSEL-RQLYHVVVLAYGAES-------DRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILG 166 (334)
Q Consensus 95 v~~~v~~~~~-~~~yd~lIlATGs~~-------p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG 166 (334)
+ +..+. ...||+||+|||+.. |..|++||.+.+++++..+++.. ....+++|+|||
T Consensus 467 v----~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~------------~~~~g~~VvViG 530 (690)
T 3k30_A 467 M----TGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAG------------RLPDGKKVVVYD 530 (690)
T ss_dssp C----CHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTT------------CCCSSSEEEEEE
T ss_pred e----cHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCC------------CCCCCCEEEEEc
Confidence 4 23333 358999999999931 44678999887788877665421 133678999999
Q ss_pred --CCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccC----CCHHHHHHHHcCCceEEEEccC
Q 019876 167 --QGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAA----CTAKELREILGIKNLYVHIRED 240 (334)
Q Consensus 167 --~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~----~~~~~~~~~l~~~gv~~~~~~~ 240 (334)
+|.+|+|+|..|.+ .+. +|+++++.+.+... .....+.+.|+..||+++.+..
T Consensus 531 ~ggG~~g~e~A~~L~~--------------------~g~-~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~ 589 (690)
T 3k30_A 531 DDHYYLGGVVAELLAQ--------------------KGY-EVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHA 589 (690)
T ss_dssp CSCSSHHHHHHHHHHH--------------------TTC-EEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEE
T ss_pred CCCCccHHHHHHHHHh--------------------CCC-eeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcE
Confidence 99999999999996 565 69999999876543 3357788888999999998765
Q ss_pred c
Q 019876 241 D 241 (334)
Q Consensus 241 ~ 241 (334)
.
T Consensus 590 V 590 (690)
T 3k30_A 590 V 590 (690)
T ss_dssp E
T ss_pred E
Confidence 4
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.83 E-value=6.2e-20 Score=167.89 Aligned_cols=160 Identities=14% Similarity=0.149 Sum_probs=104.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCC-----cchhHHHHHHHHHhhcC-CcEEE
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDH-----PETKIVINQFSRVVQHE-RCSFF 90 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~-----~~~~~~~~~~~~~~~~~-~i~~~ 90 (334)
++.++|+||||||||++||.+|++.+ .+|+|||++. +||.+.... |++ ....++.....+.+.++ .+.+.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g--~~v~lie~~~-~gg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRAR--KQIALFDNNT-NRNRVTQNS-HGFITRDGIKPEEFKEIGLNEVMKYPSVHYY 79 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSC-CGGGGSSCB-CCSTTCTTBCHHHHHHHHHHHHTTSTTEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCC-CCCeeeeec-CCccCCCCCCHHHHHHHHHHHHHhcCCEEEE
Confidence 45689999999999999999999997 9999999974 455442211 222 23445555555555544 45555
Q ss_pred eCeEEc--------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCC
Q 019876 91 GNVTLG--------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (334)
Q Consensus 91 ~~~~v~--------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
....+. ..+...++ ++.||+||||||+ .|+.|++||.+. .+++++..... . ..+
T Consensus 80 ~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs-~p~~p~i~G~~~~~~~~v~~~~~~~~----~---------~~~ 145 (304)
T 4fk1_A 80 EKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM-QEEFPSIPNVREYYGKSLFSCPYCDG----W---------ELK 145 (304)
T ss_dssp ECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC-EEECCSCTTHHHHBTTTEESCHHHHS----G---------GGT
T ss_pred eeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC-ccccccccCccccccceeeeccccch----h---------Hhc
Confidence 554432 12333333 4689999999999 699999999752 34444322211 0 125
Q ss_pred CCeEEEEcCCHH-HHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 159 TDTAVILGQGNV-ALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 159 ~k~vvVIG~G~~-g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+++++|||||.. ++|+|..+.+ .+ .+|+++.+...+
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~--------------------~~-~~v~i~~~~~~~ 182 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYN--------------------WS-TDLVIATNGNEL 182 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTT--------------------TC-SCEEEECSSCCC
T ss_pred CCceeeecCCCchhhhHHHHHHh--------------------CC-ceEEEEeccccc
Confidence 678888888865 5777777774 44 569999877644
No 66
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.83 E-value=4.8e-20 Score=183.71 Aligned_cols=197 Identities=15% Similarity=0.176 Sum_probs=137.6
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc---CCCC--cchhHHHHHHHHHhhcCCcEEEe
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV---APDH--PETKIVINQFSRVVQHERCSFFG 91 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~---~p~~--~~~~~~~~~~~~~~~~~~i~~~~ 91 (334)
+.+++|+|||||+||++||.+|++.+++.+|+|||+++.++- ...++ .++. .....+..++..+.+..+++++.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~-~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v~~ 112 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF-ANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRV 112 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-CGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEEEC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc-cCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEEEE
Confidence 456899999999999999999999966799999999887531 11111 0111 01112334455566677899888
Q ss_pred CeEEc------eEEecc---cc---eeccCeEEEeccCCCCCCCCCCCc-cCCCccchhhHHHHhcCCCCCCCCCCCCCC
Q 019876 92 NVTLG------SSVSLS---EL---RQLYHVVVLAYGAESDRALGIPGE-DLIGVHSAREFVWWYNGHPDGKNLSPDLKS 158 (334)
Q Consensus 92 ~~~v~------~~v~~~---~~---~~~yd~lIlATGs~~p~~~~ipG~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (334)
+..+. ..+.+. ++ ...||+||||||+ .|+.|++||. +.+++++...+....... .. +. -..
T Consensus 113 ~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~-~p~~p~i~G~~~~~~v~~~~~~~~~~~~~-~~--l~--~~~ 186 (588)
T 3ics_A 113 LSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA-KPIVPSIPGIEEAKALFTLRNVPDTDRIK-AY--ID--EKK 186 (588)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE-EECCCCCTTTTTCTTEEECSSHHHHHHHH-HH--HH--HHC
T ss_pred CCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC-CCCCCCCCCcccCCCeEEeCCHHHHHHHH-HH--Hh--hcC
Confidence 77652 123332 22 3589999999999 6899999998 677777665443221000 00 00 014
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCH---HHHHHHHcCCceEE
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTA---KELREILGIKNLYV 235 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~---~~~~~~l~~~gv~~ 235 (334)
+++++|||+|++|+|+|..|++ .|. +|++++|.+.++..++. +.+.+.++..||++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i 245 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRE--------------------RGI-EVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVEL 245 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHh--------------------CCC-eEEEEecCCcccccCCHHHHHHHHHHHHHcCCEE
Confidence 7899999999999999999986 565 69999999988888775 45677788899999
Q ss_pred EEccCc
Q 019876 236 HIREDD 241 (334)
Q Consensus 236 ~~~~~~ 241 (334)
+.+...
T Consensus 246 ~~~~~v 251 (588)
T 3ics_A 246 VFEDGV 251 (588)
T ss_dssp ECSCCE
T ss_pred EECCeE
Confidence 876543
No 67
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.83 E-value=1.9e-19 Score=176.91 Aligned_cols=200 Identities=18% Similarity=0.252 Sum_probs=140.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc--cc--CCC--CcchhHHHHHHHHHhhcCCcEEEe
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS--GV--APD--HPETKIVINQFSRVVQHERCSFFG 91 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~--~~--~p~--~~~~~~~~~~~~~~~~~~~i~~~~ 91 (334)
..++|+||||||||+++|.+|++.+ .+|+|+|+ ..||.+.. ++ ++. +....++..++.+.+.+.+++++.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G--~~v~lie~--~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~v~~ 286 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKG--IRTGLMGE--RFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYDVDVID 286 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECS--STTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSCEEEEC
T ss_pred CcccEEEECCcHHHHHHHHHHHhCC--CeEEEEEC--CCCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEc
Confidence 4679999999999999999999987 99999986 45666542 11 011 123456777888888889999998
Q ss_pred CeEEc-----------eEEecccc-eeccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCC
Q 019876 92 NVTLG-----------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDL 156 (334)
Q Consensus 92 ~~~v~-----------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~ 156 (334)
++.+. ..+.+.++ .+.||+||+|||+ .|+.+++||.+. .+++.+. .. ....
T Consensus 287 ~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~-~~~~~~ipG~~~~~~~~v~~~~--------~~-----~~~~ 352 (521)
T 1hyu_A 287 SQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA-KWRNMNVPGEDQYRTKGVTYCP--------HC-----DGPL 352 (521)
T ss_dssp SCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE-EECCCCCTTTTTTTTTTEECCT--------TC-----CGGG
T ss_pred CCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC-CcCCCCCCChhhhcCceEEEee--------cC-----chhh
Confidence 85431 12444444 4689999999999 588888998752 2222211 00 1112
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEE
Q 019876 157 KSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVH 236 (334)
Q Consensus 157 ~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~ 236 (334)
..+++|+|||+|++|+|+|..|++ .+ .+||+++|.+.+.. ++
T Consensus 353 ~~~k~V~ViGgG~~g~E~A~~L~~--------------------~g-~~Vtlv~~~~~l~~---~~-------------- 394 (521)
T 1hyu_A 353 FKGKRVAVIGGGNSGVEAAIDLAG--------------------IV-EHVTLLEFAPEMKA---DQ-------------- 394 (521)
T ss_dssp GBTSEEEEECCSHHHHHHHHHHHH--------------------HB-SEEEEECSSSSCCS---CH--------------
T ss_pred cCCCeEEEECCCHHHHHHHHHHHh--------------------hC-CEEEEEEeCcccCc---CH--------------
Confidence 368999999999999999999986 44 47999999876531 01
Q ss_pred EccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEEEE
Q 019876 237 IREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHFEK 311 (334)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~~~ 311 (334)
.+++.+. ...||++++++.+++|. + +++++++|.+.+
T Consensus 395 ---------------------------~l~~~l~--------~~~gV~v~~~~~v~~i~--~-~~~~v~~v~~~~ 431 (521)
T 1hyu_A 395 ---------------------------VLQDKVR--------SLKNVDIILNAQTTEVK--G-DGSKVVGLEYRD 431 (521)
T ss_dssp ---------------------------HHHHHHT--------TCTTEEEECSEEEEEEE--E-CSSSEEEEEEEE
T ss_pred ---------------------------HHHHHHh--------cCCCcEEEeCCEEEEEE--c-CCCcEEEEEEEe
Confidence 1222221 12589999999999998 5 356888888875
No 68
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.83 E-value=3.7e-20 Score=180.34 Aligned_cols=162 Identities=19% Similarity=0.215 Sum_probs=111.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCc--------------------------ch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHP--------------------------ET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~--------------------------~~ 71 (334)
.++|+|||||++|++||..|++.+ .+|+|||+ +.+||.+.+ ++.|.+. ..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G--~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALG--KRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTT--CCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCc--CEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCH
Confidence 469999999999999999999997 99999999 456665432 3322110 01
Q ss_pred -----------hHHHHHHHHHhhcCCcEEEeCeEEc---eEEec--ccceeccCeEEEeccCCCCC-CCCCCCccCCCcc
Q 019876 72 -----------KIVINQFSRVVQHERCSFFGNVTLG---SSVSL--SELRQLYHVVVLAYGAESDR-ALGIPGEDLIGVH 134 (334)
Q Consensus 72 -----------~~~~~~~~~~~~~~~i~~~~~~~v~---~~v~~--~~~~~~yd~lIlATGs~~p~-~~~ipG~~~~~v~ 134 (334)
..+...+...+...+++++.+.... ..+.+ +...+.||++|||||+ .|. .|++||.+ .++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~-~p~~~p~i~G~~--~~~ 179 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGA-KIVSNSAIKGSD--LCL 179 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCE-EECCC--CBTGG--GSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCC-CcccCCCCCCcc--ccc
Confidence 1222334455667789988775431 23444 3345689999999999 588 88899875 233
Q ss_pred chhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 135 SAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
+..++.. . ...+++++|||+|++|+|+|..|.+ .|. +|+++++.+.
T Consensus 180 ~~~~~~~----~---------~~~~~~v~ViGgG~~g~e~A~~l~~--------------------~g~-~Vtli~~~~~ 225 (484)
T 3o0h_A 180 TSNEIFD----L---------EKLPKSIVIVGGGYIGVEFANIFHG--------------------LGV-KTTLLHRGDL 225 (484)
T ss_dssp CTTTGGG----C---------SSCCSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSS
T ss_pred cHHHHHh----H---------HhcCCcEEEECcCHHHHHHHHHHHH--------------------cCC-eEEEEECCCc
Confidence 3333221 0 1247899999999999999999986 565 6999999987
Q ss_pred cccCCC
Q 019876 215 VQAACT 220 (334)
Q Consensus 215 ~~~~~~ 220 (334)
++..++
T Consensus 226 ~l~~~~ 231 (484)
T 3o0h_A 226 ILRNFD 231 (484)
T ss_dssp SSTTSC
T ss_pred cccccC
Confidence 765443
No 69
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.83 E-value=5.3e-20 Score=178.08 Aligned_cols=182 Identities=16% Similarity=0.213 Sum_probs=128.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc-cccCCCC-----------------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDH----------------------------- 68 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~-~~~~p~~----------------------------- 68 (334)
.++|+||||||||++||..|++.+ .+|+|||+ +.+||.|. +++.|.+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g--~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~ 81 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLG--IPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPR 81 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHT--CCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCc
Confidence 479999999999999999999997 99999999 56676543 2322211
Q ss_pred cchhHHHH-----------HHHHHhhcCCcEEEeCeEEc---eEEecccceeccCeEEEeccCCCCCCCC-CCCccCCCc
Q 019876 69 PETKIVIN-----------QFSRVVQHERCSFFGNVTLG---SSVSLSELRQLYHVVVLAYGAESDRALG-IPGEDLIGV 133 (334)
Q Consensus 69 ~~~~~~~~-----------~~~~~~~~~~i~~~~~~~v~---~~v~~~~~~~~yd~lIlATGs~~p~~~~-ipG~~~~~v 133 (334)
.....+.. .+..++++.+++++.+..+. ..+.+.+..+.||+||||||+ .|+.|+ +|. +. .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~~~~d~lviATGs-~p~~~~~~~~-~~-~v 158 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQCEHLLLATGS-SSVELPMLPL-GG-PV 158 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETTEEEECSEEEECCCE-EECCBTTBCC-BT-TE
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEeeEEEEeCEEEEeCCC-CCCCCCCCCc-cC-cE
Confidence 01112211 23356677899998887542 245554545689999999999 577665 552 22 45
Q ss_pred cchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
++..++.. .. ..+++|+|||+|++|+|+|..|++ .|. +|+++++++
T Consensus 159 ~~~~~~~~----~~---------~~~~~vvViGgG~~g~e~A~~l~~--------------------~g~-~Vtlv~~~~ 204 (458)
T 1lvl_A 159 ISSTEALA----PK---------ALPQHLVVVGGGYIGLELGIAYRK--------------------LGA-QVSVVEARE 204 (458)
T ss_dssp ECHHHHTC----CS---------SCCSEEEEECCSHHHHHHHHHHHH--------------------HTC-EEEEECSSS
T ss_pred ecHHHHhh----hh---------ccCCeEEEECcCHHHHHHHHHHHH--------------------CCC-eEEEEEcCC
Confidence 55443321 11 146899999999999999999986 565 699999999
Q ss_pred ccccCCCH---HHHHHHHcCCceEEEEccC
Q 019876 214 PVQAACTA---KELREILGIKNLYVHIRED 240 (334)
Q Consensus 214 ~~~~~~~~---~~~~~~l~~~gv~~~~~~~ 240 (334)
.++..+++ +.+.+.++..||+++++..
T Consensus 205 ~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~ 234 (458)
T 1lvl_A 205 RILPTYDSELTAPVAESLKKLGIALHLGHS 234 (458)
T ss_dssp SSSTTSCHHHHHHHHHHHHHHTCEEETTCE
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEECCE
Confidence 88876665 4566677788999987644
No 70
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.83 E-value=3.7e-20 Score=180.53 Aligned_cols=163 Identities=16% Similarity=0.137 Sum_probs=109.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcC--------CCCCcccccc-ccCCCC--------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR--------LPTPFGLVRS-GVAPDH-------------------- 68 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~--------~~~~gg~~~~-~~~p~~-------------------- 68 (334)
..++|+||||||||++||..|++.+ .+|+|||+ ...+||.|.+ +|.|.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G--~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 82 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLG--KKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGW 82 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCC--CeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCc
Confidence 3579999999999999999999997 99999997 3456775432 332211
Q ss_pred -------cchhHHHH-----------HHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCC
Q 019876 69 -------PETKIVIN-----------QFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 69 -------~~~~~~~~-----------~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~ 122 (334)
.....+.. .+...+...+++++.+.... ..+...++ .+.||+||||||+ .|..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs-~p~~ 161 (488)
T 3dgz_A 83 EVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGG-RPRY 161 (488)
T ss_dssp CCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCE-EECC
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCC-CCCC
Confidence 11111111 12334556788887665431 12333333 4689999999999 6888
Q ss_pred CC-CCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC
Q 019876 123 LG-IPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS 201 (334)
Q Consensus 123 ~~-ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~ 201 (334)
|+ +||.+.. +++..++. ... ..+++++|||+|++|+|+|..|++ .
T Consensus 162 p~~i~G~~~~-~~~~~~~~----~~~---------~~~~~vvViGgG~ig~E~A~~l~~--------------------~ 207 (488)
T 3dgz_A 162 PTQVKGALEY-GITSDDIF----WLK---------ESPGKTLVVGASYVALECAGFLTG--------------------I 207 (488)
T ss_dssp CSSCBTHHHH-CBCHHHHT----TCS---------SCCCSEEEECCSHHHHHHHHHHHH--------------------T
T ss_pred CCCCCCcccc-cCcHHHHH----hhh---------hcCCeEEEECCCHHHHHHHHHHHH--------------------c
Confidence 88 9997532 23333332 111 146789999999999999999996 6
Q ss_pred CcceEEEEeecCccccCC
Q 019876 202 SIRKVYLVGRRGPVQAAC 219 (334)
Q Consensus 202 ~~~~Vtiv~r~~~~~~~~ 219 (334)
|. +||+++|.. ++..+
T Consensus 208 g~-~Vtlv~~~~-~l~~~ 223 (488)
T 3dgz_A 208 GL-DTTVMMRSI-PLRGF 223 (488)
T ss_dssp TC-CEEEEESSC-SSTTS
T ss_pred CC-ceEEEEcCc-ccccC
Confidence 75 599999864 44333
No 71
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.82 E-value=2.3e-19 Score=167.80 Aligned_cols=157 Identities=16% Similarity=0.134 Sum_probs=106.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCCCcccccc-----------------ccC---------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRS-----------------GVA--------------- 65 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~~gg~~~~-----------------~~~--------------- 65 (334)
.++|+|||||++|+++|..|++.+ . +|+|||+++ +||.|.+ ++.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g--~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFG--ITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcC--CCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 468999999999999999999987 7 999999987 6665421 110
Q ss_pred -CCCcchhHHHHHHHHHhhcCCcEEEeCeEEc--------eEEecccceeccCeEEEeccCCCCCCCCCCCccCCCccch
Q 019876 66 -PDHPETKIVINQFSRVVQHERCSFFGNVTLG--------SSVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSA 136 (334)
Q Consensus 66 -p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~--------~~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~ 136 (334)
..+.....+..++.+++++.+++++.++.+. ..+...+..+.||+||+|||++ +. |.+|+ ..+++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vVlAtG~~-~~-p~ip~---~~~~~~ 155 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIFVATGDY-NF-PKKPF---KYGIHY 155 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEEECCCST-TS-BCCCS---SSCEEG
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEEECCCCC-Cc-cCCCC---Cceech
Confidence 0011224566677777788899998876442 1344444457899999999995 43 45666 123332
Q ss_pred hhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccc
Q 019876 137 REFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (334)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~ 216 (334)
..+. +.. ...+++|+|||+|++|+|+|..|++ .+. +|++++|++.+.
T Consensus 156 ~~~~-------~~~-----~~~~~~vvVvG~G~~g~e~a~~l~~--------------------~g~-~V~lv~~~~~~~ 202 (369)
T 3d1c_A 156 SEIE-------DFD-----NFNKGQYVVIGGNESGFDAAYQLAK--------------------NGS-DIALYTSTTGLN 202 (369)
T ss_dssp GGCS-------CGG-----GSCSSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECC-----
T ss_pred hhcC-------Chh-----hcCCCEEEEECCCcCHHHHHHHHHh--------------------cCC-eEEEEecCCCCC
Confidence 2211 110 1257899999999999999999986 565 699999987664
No 72
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.82 E-value=1e-19 Score=178.81 Aligned_cols=182 Identities=16% Similarity=0.222 Sum_probs=126.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC--------CCcccccc-ccCCCC---------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP--------TPFGLVRS-GVAPDH--------------------- 68 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~--------~~gg~~~~-~~~p~~--------------------- 68 (334)
.++|+||||||||++||..|++.+ .+|+|||+.+ .+||.|.+ +|.|.+
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G--~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYG--KKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 479999999999999999999997 9999999854 56775432 333311
Q ss_pred ------cchhHHHH-----------HHHHHhhcCCcEEEeCeEEc-----eEEecccc---eeccCeEEEeccCCCCCCC
Q 019876 69 ------PETKIVIN-----------QFSRVVQHERCSFFGNVTLG-----SSVSLSEL---RQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 69 ------~~~~~~~~-----------~~~~~~~~~~i~~~~~~~v~-----~~v~~~~~---~~~yd~lIlATGs~~p~~~ 123 (334)
.....+.. .+...++..+++++.+.... ..+...++ .+.||+||||||+ .|+.|
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs-~p~~p 188 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGE-RPRYL 188 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCE-EECCC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCC-CcCCC
Confidence 11111111 12234556789888775431 12333333 4689999999999 69989
Q ss_pred CCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCc
Q 019876 124 GIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSI 203 (334)
Q Consensus 124 ~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (334)
++||.+. .+++..++. ... ...++++|||+|++|+|+|..|++ .|.
T Consensus 189 ~i~G~~~-~~~t~~~~~----~l~---------~~~~~vvVIGgG~ig~E~A~~l~~--------------------~G~ 234 (519)
T 3qfa_A 189 GIPGDKE-YCISSDDLF----SLP---------YCPGKTLVVGASYVALECAGFLAG--------------------IGL 234 (519)
T ss_dssp CCTTHHH-HCBCHHHHT----TCS---------SCCCSEEEECCSHHHHHHHHHHHH--------------------TTC
T ss_pred CCCCccC-ceEcHHHHh----hhh---------hcCCeEEEECCcHHHHHHHHHHHH--------------------cCC
Confidence 9999643 233333332 111 145789999999999999999996 676
Q ss_pred ceEEEEeecCccccCCCH---HHHHHHHcCCceEEEEcc
Q 019876 204 RKVYLVGRRGPVQAACTA---KELREILGIKNLYVHIRE 239 (334)
Q Consensus 204 ~~Vtiv~r~~~~~~~~~~---~~~~~~l~~~gv~~~~~~ 239 (334)
+||+++|. .++..+++ +.+.+.|+..||+++.+.
T Consensus 235 -~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~GV~v~~~~ 271 (519)
T 3qfa_A 235 -DVTVMVRS-ILLRGFDQDMANKIGEHMEEHGIKFIRQF 271 (519)
T ss_dssp -CEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEESE
T ss_pred -eEEEEecc-cccccCCHHHHHHHHHHHHHCCCEEEeCC
Confidence 59999985 66677765 456677888999998874
No 73
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.82 E-value=3.5e-20 Score=180.95 Aligned_cols=164 Identities=16% Similarity=0.238 Sum_probs=109.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc-ccccCCCC--------------------------cch
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV-RSGVAPDH--------------------------PET 71 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~-~~~~~p~~--------------------------~~~ 71 (334)
.++|+||||||||++||..|++.+ .+|+|||+++ +||.+ ++||.|.+ ...
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G--~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHT--DKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTC--SCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCH
Confidence 379999999999999999999997 9999999975 66654 22332221 111
Q ss_pred hHHHHHHHH-----------Hhhc-CCcEEEeCeEE---ceEEeccc-ceeccCeEEEeccCCCCCCCCCCCccCCCccc
Q 019876 72 KIVINQFSR-----------VVQH-ERCSFFGNVTL---GSSVSLSE-LRQLYHVVVLAYGAESDRALGIPGEDLIGVHS 135 (334)
Q Consensus 72 ~~~~~~~~~-----------~~~~-~~i~~~~~~~v---~~~v~~~~-~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~ 135 (334)
.++..++.. .+.. .+++++.+... ...+.+.+ ..+.||+||||||+ .|..|++++...+++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~~~~~~d~lViATGs-~p~~p~~~~~~~~~v~t 163 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDHSQVIAKRIVIATGS-RPNYPEFLAAAGSRLLT 163 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTTEEEEEEEEEECCCE-ECCCCHHHHTTGGGEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCCcEEEeCEEEEccCC-CCcCCCCCCccCCcEEc
Confidence 222222211 1111 13334433221 23455533 34689999999999 58888776655556776
Q ss_pred hhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 136 AREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+.++.. .. ..+++|+|||+|++|+|+|..|++ .|. +||+++|++.+
T Consensus 164 ~~~~~~----~~---------~~~k~vvViGgG~ig~E~A~~l~~--------------------~g~-~Vtlv~~~~~~ 209 (492)
T 3ic9_A 164 NDNLFE----LN---------DLPKSVAVFGPGVIGLELGQALSR--------------------LGV-IVKVFGRSGSV 209 (492)
T ss_dssp HHHHTT----CS---------SCCSEEEEESSCHHHHHHHHHHHH--------------------TTC-EEEEECCTTCC
T ss_pred HHHHhh----hh---------hcCCeEEEECCCHHHHHHHHHHHH--------------------cCC-eEEEEEECCcc
Confidence 655432 11 147999999999999999999996 665 69999999887
Q ss_pred ccCCC
Q 019876 216 QAACT 220 (334)
Q Consensus 216 ~~~~~ 220 (334)
+..++
T Consensus 210 l~~~d 214 (492)
T 3ic9_A 210 ANLQD 214 (492)
T ss_dssp TTCCC
T ss_pred cccCC
Confidence 64443
No 74
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.82 E-value=1.4e-19 Score=175.33 Aligned_cols=162 Identities=15% Similarity=0.175 Sum_probs=117.4
Q ss_pred CeEEEECCchHHHHHHHHHhh---cCCCCe---EEEEcCCCCCccccccc----c-------------------------
Q 019876 20 LRVCVVGSGPAGFYTAEKTLK---AHQEAQ---VDIIDRLPTPFGLVRSG----V------------------------- 64 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~---~~~~~~---v~vie~~~~~gg~~~~~----~------------------------- 64 (334)
++|+|||||+||++||..|++ .+ .+ |+|||+.+.+||.|.+. +
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G--~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG--AEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT--CCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC--CCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcc
Confidence 699999999999999999999 76 88 99999998899888652 1
Q ss_pred C-------------CCCcchhHHHHHHHHHhhcCCcE--EEeCeEEc------e----EEeccc------ceeccCeEEE
Q 019876 65 A-------------PDHPETKIVINQFSRVVQHERCS--FFGNVTLG------S----SVSLSE------LRQLYHVVVL 113 (334)
Q Consensus 65 ~-------------p~~~~~~~~~~~~~~~~~~~~i~--~~~~~~v~------~----~v~~~~------~~~~yd~lIl 113 (334)
+ +.+....++..++.+++++.+++ ++.++.|. . .|++.+ ....||+||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVv 160 (464)
T 2xve_A 81 FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVC 160 (464)
T ss_dssp BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEE
Confidence 0 11222346677777877777876 77676542 1 344433 2358999999
Q ss_pred eccCC-CCCCCCCCCccC-CC-ccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccc
Q 019876 114 AYGAE-SDRALGIPGEDL-IG-VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDI 190 (334)
Q Consensus 114 ATGs~-~p~~~~ipG~~~-~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~ 190 (334)
|||.+ .|+.|++||.+. ++ +++..++. .. ....+++|+|||+|++|+|+|..|++
T Consensus 161 AtG~~s~p~~p~ipG~~~~~g~~~hs~~~~----~~--------~~~~~k~VvVVG~G~sg~eiA~~l~~---------- 218 (464)
T 2xve_A 161 CTGHFSTPYVPEFEGFEKFGGRILHAHDFR----DA--------LEFKDKTVLLVGSSYSAEDIGSQCYK---------- 218 (464)
T ss_dssp CCCSSSSBCCCCCBTTTTCCSEEEEGGGCC----CG--------GGGTTSEEEEECCSTTHHHHHHHHHH----------
T ss_pred CCCCCCCCccCCCCCcccCCceEEehhhhC----CH--------hHcCCCEEEEEcCCCCHHHHHHHHHH----------
Confidence 99942 588889999763 33 33332221 11 01268999999999999999999996
Q ss_pred cHHHHHHHhcCCcceEEEEeecCccc
Q 019876 191 ASYAWTALEGSSIRKVYLVGRRGPVQ 216 (334)
Q Consensus 191 ~~~~~~~~~~~~~~~Vtiv~r~~~~~ 216 (334)
.+. +|++++|++.++
T Consensus 219 ----------~g~-~V~li~~~~~~~ 233 (464)
T 2xve_A 219 ----------YGA-KKLISCYRTAPM 233 (464)
T ss_dssp ----------TTC-SEEEEECSSCCC
T ss_pred ----------hCC-eEEEEEECCCCC
Confidence 565 699999987654
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.82 E-value=4e-19 Score=160.87 Aligned_cols=175 Identities=14% Similarity=0.153 Sum_probs=127.2
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc--cccCCC--CcchhHHHHHHHHHhhcC-CcEEEeCeE
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR--SGVAPD--HPETKIVINQFSRVVQHE-RCSFFGNVT 94 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~--~~~~p~--~~~~~~~~~~~~~~~~~~-~i~~~~~~~ 94 (334)
++|+|||||++|+++|..|++.+ .+|+|||+.+..+.... ++. +. .....++..++.+.+.+. +++++.+..
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g--~~v~lie~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v 79 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRAR--KNILLVDAGERRNRFASHSHGF-LGQDGKAPGEIIAEARRQIERYPTIHWVEGRV 79 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCCGGGGCSCCCSS-TTCTTCCHHHHHHHHHHHHTTCTTEEEEESCE
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCcccccchhhcCC-cCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEE
Confidence 68999999999999999999997 89999999765443321 122 22 234557778888888776 788876644
Q ss_pred Ece-------EEecccce-eccCeEEEeccCCCCCCCCCCCccC---CCccchhhHHHHhcCCCCCCCCCCCCCCCCeEE
Q 019876 95 LGS-------SVSLSELR-QLYHVVVLAYGAESDRALGIPGEDL---IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAV 163 (334)
Q Consensus 95 v~~-------~v~~~~~~-~~yd~lIlATGs~~p~~~~ipG~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vv 163 (334)
... .+.+.++. +.||+||+|||+ .|+.|++||.+. .+++.+. +.. .. ...+++|+
T Consensus 80 ~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~-~~~~~~~~g~~~~~~~~~~~~~-~~~---~~---------~~~~~~v~ 145 (297)
T 3fbs_A 80 TDAKGSFGEFIVEIDGGRRETAGRLILAMGV-TDELPEIAGLRERWGSAVFHCP-YCH---GY---------ELDQGKIG 145 (297)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEEEEECCCC-EEECCCCBTTGGGBTTTEESCH-HHH---TG---------GGTTCEEE
T ss_pred EEEEEcCCeEEEEECCCCEEEcCEEEECCCC-CCCCCCCCCchhhcCCeeEEcc-cCc---ch---------hhcCCEEE
Confidence 321 34444443 689999999999 588888998763 3444332 111 10 12579999
Q ss_pred EEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEE
Q 019876 164 ILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHI 237 (334)
Q Consensus 164 VIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~ 237 (334)
|||+|++|+|+|..|.+ .+ +|+++.++.. ...+.+.+.|+..||+++.
T Consensus 146 vvG~G~~~~e~a~~l~~--------------------~g--~v~~v~~~~~----~~~~~~~~~l~~~gv~i~~ 193 (297)
T 3fbs_A 146 VIAASPMAIHHALMLPD--------------------WG--ETTFFTNGIV----EPDADQHALLAARGVRVET 193 (297)
T ss_dssp EECCSTTHHHHHHHGGG--------------------TS--EEEEECTTTC----CCCHHHHHHHHHTTCEEEC
T ss_pred EEecCccHHHHHHHhhh--------------------cC--cEEEEECCCC----CCCHHHHHHHHHCCcEEEc
Confidence 99999999999999996 55 7999998865 2245677888899999984
No 76
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.81 E-value=3.7e-19 Score=173.24 Aligned_cols=163 Identities=18% Similarity=0.274 Sum_probs=108.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC---C------CCcccccc-ccCCC--------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL---P------TPFGLVRS-GVAPD-------------------- 67 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~---~------~~gg~~~~-~~~p~-------------------- 67 (334)
..++|+||||||||++||..|++.+ .+|+|||+. + ..||.|.+ +|.|.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G--~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g 85 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNG--ARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYG 85 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcC
Confidence 4579999999999999999999997 999999942 1 25665532 33221
Q ss_pred -------CcchhHHHHH-----------HHHHhhcCCcEEEeCeEEc-----eEEecccc--eeccCeEEEeccCCCCCC
Q 019876 68 -------HPETKIVINQ-----------FSRVVQHERCSFFGNVTLG-----SSVSLSEL--RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 68 -------~~~~~~~~~~-----------~~~~~~~~~i~~~~~~~v~-----~~v~~~~~--~~~yd~lIlATGs~~p~~ 122 (334)
......+..+ +...+...+++++.+.... ..+...++ .+.||+||||||+ .|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs-~p~~ 164 (483)
T 3dgh_A 86 WNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGG-RPRY 164 (483)
T ss_dssp BCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCE-EECC
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCC-CcCC
Confidence 1111222111 2233456688887765431 12333333 4689999999999 6998
Q ss_pred CCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCC
Q 019876 123 LGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS 202 (334)
Q Consensus 123 ~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~ 202 (334)
|++||.+... ++..++. ... ..+++++|||+|++|+|+|..|++ .|
T Consensus 165 p~i~G~~~~~-~~~~~~~----~~~---------~~~~~vvViGgG~~g~E~A~~l~~--------------------~g 210 (483)
T 3dgh_A 165 PDIPGAVEYG-ITSDDLF----SLD---------REPGKTLVVGAGYIGLECAGFLKG--------------------LG 210 (483)
T ss_dssp CSSTTHHHHC-BCHHHHT----TCS---------SCCCEEEEECCSHHHHHHHHHHHH--------------------TT
T ss_pred CCCCCccccc-CcHHHHh----hhh---------hcCCcEEEECCCHHHHHHHHHHHH--------------------cC
Confidence 9999975332 3333332 111 146899999999999999999996 66
Q ss_pred cceEEEEeecCccccCC
Q 019876 203 IRKVYLVGRRGPVQAAC 219 (334)
Q Consensus 203 ~~~Vtiv~r~~~~~~~~ 219 (334)
. +|++++|. .++..+
T Consensus 211 ~-~Vtlv~~~-~~l~~~ 225 (483)
T 3dgh_A 211 Y-EPTVMVRS-IVLRGF 225 (483)
T ss_dssp C-EEEEEESS-CSSTTS
T ss_pred C-EEEEEeCC-CCCccc
Confidence 5 69999884 444333
No 77
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.81 E-value=3.3e-19 Score=171.84 Aligned_cols=164 Identities=20% Similarity=0.252 Sum_probs=116.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC--eEEEEcCCCCCccccccccC-------C----------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRLPTPFGLVRSGVA-------P---------------------- 66 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~--~v~vie~~~~~gg~~~~~~~-------p---------------------- 66 (334)
..++|+|||||++|+++|..|++.+ . +|+|||+.+.+||.|.+... |
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G--~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~ 82 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEK--AFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPS 82 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--CCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccC
Confidence 4579999999999999999999997 6 99999999888888766310 0
Q ss_pred ---------------------------CCcchhHHHHHHHHHhhcCCcEEEeCeEEce--------EEeccc---c----
Q 019876 67 ---------------------------DHPETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSE---L---- 104 (334)
Q Consensus 67 ---------------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~v~~~~---~---- 104 (334)
.+.....+..++.++++..+..+++++.|.. .+++.+ +
T Consensus 83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 83 PLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEE
T ss_pred chhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeE
Confidence 0111235666777777766667777766521 344433 3
Q ss_pred eeccCeEEEeccCCC-CCCCCCCCccC-----CC-ccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHH
Q 019876 105 RQLYHVVVLAYGAES-DRALGIPGEDL-----IG-VHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARI 177 (334)
Q Consensus 105 ~~~yd~lIlATGs~~-p~~~~ipG~~~-----~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~ 177 (334)
...||+||+|||+++ |+.|++||.+. ++ ++++.++. +. ....+++|+|||+|++|+|+|..
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~-------~~-----~~~~~k~VvVvG~G~sg~e~A~~ 230 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFR-------EP-----ELFVGESVLVVGGASSANDLVRH 230 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCC-------CG-----GGGTTCCEEEECSSHHHHHHHHH
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccC-------Ch-----hhcCCCEEEEEccCcCHHHHHHH
Confidence 368999999999843 77788998652 22 33332221 10 11268999999999999999999
Q ss_pred HccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 178 LLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 178 L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
|++ .+.+.|+++.|++.+
T Consensus 231 l~~--------------------~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 231 LTP--------------------VAKHPIYQSLLGGGD 248 (447)
T ss_dssp HTT--------------------TSCSSEEEECTTCCS
T ss_pred HHH--------------------HhCCcEEEEeCCCCc
Confidence 996 454339999998765
No 78
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.81 E-value=2.3e-19 Score=176.91 Aligned_cols=163 Identities=18% Similarity=0.196 Sum_probs=117.7
Q ss_pred CCCeEEEECCchHHHHHHHHHh-hcCCCCeEEEEcCCCCCccccccccCCCC---------------------------c
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTL-KAHQEAQVDIIDRLPTPFGLVRSGVAPDH---------------------------P 69 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~-~~~~~~~v~vie~~~~~gg~~~~~~~p~~---------------------------~ 69 (334)
..++|+|||||++|+++|..|+ +.+ .+|+|||+++.+||.|....+|+. .
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G--~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~ 84 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELG--LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYI 84 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC--CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCC--CCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCC
Confidence 3469999999999999999999 776 899999999888887754222221 1
Q ss_pred chhHHHHHHHHHhhcCCc--EEEeCeEEce----------EEecccce-eccCeEEEeccC-CCCCCCCCCCcc-CCCc-
Q 019876 70 ETKIVINQFSRVVQHERC--SFFGNVTLGS----------SVSLSELR-QLYHVVVLAYGA-ESDRALGIPGED-LIGV- 133 (334)
Q Consensus 70 ~~~~~~~~~~~~~~~~~i--~~~~~~~v~~----------~v~~~~~~-~~yd~lIlATGs-~~p~~~~ipG~~-~~~v- 133 (334)
...++..++...+++.++ +++.++.|.. .+.+.+++ +.||+||+|||. ..|+.|++||.+ ..|.
T Consensus 85 ~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~ 164 (540)
T 3gwf_A 85 TQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGET 164 (540)
T ss_dssp EHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSBCCCCCTTGGGCCSEE
T ss_pred CHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccCCCCCCCCccccCCCE
Confidence 234677778888888777 6776655421 34444444 689999999995 258889999976 2221
Q ss_pred cchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
++...+ .+. ....+|+|+|||+|.+|+|+|..|++ .+ .+||+++|++
T Consensus 165 ~~~~~~-------~~~-----~~~~~krV~VIG~G~sgve~a~~l~~--------------------~~-~~Vtv~~r~~ 211 (540)
T 3gwf_A 165 IHTAAW-------PEG-----KSLAGRRVGVIGTGSTGQQVITSLAP--------------------EV-EHLTVFVRTP 211 (540)
T ss_dssp EEGGGC-------CSS-----CCCTTSEEEEECCSHHHHHHHHHHTT--------------------TC-SEEEEEESSC
T ss_pred EEeecC-------CCc-----cccccceEEEECCCchHHHHHHHHHh--------------------hC-CEEEEEECCC
Confidence 211111 110 11368999999999999999999996 44 5799999998
Q ss_pred cc
Q 019876 214 PV 215 (334)
Q Consensus 214 ~~ 215 (334)
.+
T Consensus 212 ~~ 213 (540)
T 3gwf_A 212 QY 213 (540)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 79
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.81 E-value=4.7e-19 Score=171.28 Aligned_cols=173 Identities=14% Similarity=0.046 Sum_probs=112.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCC---CeEEEEcCCCCCccccc---cc--c------------CCC-----------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQE---AQVDIIDRLPTPFGLVR---SG--V------------APD----------- 67 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~---~~v~vie~~~~~gg~~~---~~--~------------~p~----------- 67 (334)
.++|+|||||++|+++|..|++.++. .+|+|||+++.+|.... .+ + .|.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~~ 109 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLHK 109 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhhh
Confidence 35899999999999999999998644 89999999986541110 00 0 010
Q ss_pred -------------CcchhHHHHHHHHHhhcCCcEEEeCeEEce-------------EEecccc-----eeccCeEEEecc
Q 019876 68 -------------HPETKIVINQFSRVVQHERCSFFGNVTLGS-------------SVSLSEL-----RQLYHVVVLAYG 116 (334)
Q Consensus 68 -------------~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~-------------~v~~~~~-----~~~yd~lIlATG 116 (334)
++...++..++.++.+..+++++.++.|.. .+...++ .+.||+||+|||
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 110 HDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred cCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 111234556667777777888887765421 2333333 468999999999
Q ss_pred CCCCCCCC-CCCccCC-CccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHH
Q 019876 117 AESDRALG-IPGEDLI-GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYA 194 (334)
Q Consensus 117 s~~p~~~~-ipG~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~ 194 (334)
+ .|..|+ +++.... .+++...+........ .....+++|+|||+|++|+|+|..|++
T Consensus 190 ~-~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~vvVvGgG~sg~e~a~~l~~-------------- 248 (463)
T 3s5w_A 190 G-TPRIPQVFRALKGDGRVFHHSQYLEHMAKQP------CSSGKPMKIAIIGGGQSAAEAFIDLND-------------- 248 (463)
T ss_dssp C-EECCCGGGGGGTTCTTEEEGGGHHHHHCC-------------CEEEEEECCSHHHHHHHHHHHH--------------
T ss_pred C-CCCCcchhhhcCCCCcEEECHHHHhhHHHhh------hcccCCCeEEEECCCHhHHHHHHHHHh--------------
Confidence 9 577665 3333222 4555555554332211 011257999999999999999999986
Q ss_pred HHHHhcCCcceEEEEeecCcccc
Q 019876 195 WTALEGSSIRKVYLVGRRGPVQA 217 (334)
Q Consensus 195 ~~~~~~~~~~~Vtiv~r~~~~~~ 217 (334)
..+..+|++++|++.+++
T Consensus 249 -----~~~~~~Vt~v~r~~~~~p 266 (463)
T 3s5w_A 249 -----SYPSVQADMILRASALKP 266 (463)
T ss_dssp -----HCTTEEEEEECSSSSCCB
T ss_pred -----cCCCCeEEEEEeCCCCcC
Confidence 223467999999987654
No 80
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.80 E-value=2.4e-19 Score=177.14 Aligned_cols=167 Identities=15% Similarity=0.219 Sum_probs=119.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCC---------------------------Ccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPD---------------------------HPE 70 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~---------------------------~~~ 70 (334)
..++|+|||||++|+++|..|++.+ .+|+|||+++.+||.|....+|+ +..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G--~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~ 97 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQG--LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYAT 97 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCB
T ss_pred CCCCEEEECchHHHHHHHHHHHhCC--CCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCC
Confidence 3579999999999999999999986 89999999988888775322121 112
Q ss_pred hhHHHHHHHHHhhcCCc--EEEeCeEEce----------EEecccce-eccCeEEEecc--CCCCCCCCCCCcc-CCC-c
Q 019876 71 TKIVINQFSRVVQHERC--SFFGNVTLGS----------SVSLSELR-QLYHVVVLAYG--AESDRALGIPGED-LIG-V 133 (334)
Q Consensus 71 ~~~~~~~~~~~~~~~~i--~~~~~~~v~~----------~v~~~~~~-~~yd~lIlATG--s~~p~~~~ipG~~-~~~-v 133 (334)
..++..++...+++.++ +++.++.|.. .+.+.++. +.||+||+||| + .|..|++||.+ ..| +
T Consensus 98 ~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s-~p~~p~ipG~~~f~g~~ 176 (549)
T 4ap3_A 98 QPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS-NANTPAFDGLDRFTGDI 176 (549)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE-ECCCCCCTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC-CCCCCCCCCcccCCCce
Confidence 34677788888888777 6776655421 34444444 68999999999 5 58889999976 233 2
Q ss_pred cchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
++...+. .... ++ .+|+|+|||+|.+|+|+|..|++ .+ ++||+++|++
T Consensus 177 ~~~~~~~---~~~~-------~~-~~krV~VIG~G~sgve~a~~l~~--------------------~~-~~Vtv~~r~~ 224 (549)
T 4ap3_A 177 VHTARWP---HDGV-------DF-TGKRVGVIGTGSSGIQSIPIIAE--------------------QA-EQLFVFQRSA 224 (549)
T ss_dssp EEGGGCC---TTCC-------CC-BTCEEEEECCSHHHHHHHHHHHH--------------------HB-SEEEEEESSC
T ss_pred EEecccc---cccc-------cc-CCCEEEEECCCchHHHHHHHHHh--------------------hC-CEEEEEECCC
Confidence 2221110 0011 12 68999999999999999999996 34 5799999998
Q ss_pred ccccCC
Q 019876 214 PVQAAC 219 (334)
Q Consensus 214 ~~~~~~ 219 (334)
.+..+.
T Consensus 225 ~~ilp~ 230 (549)
T 4ap3_A 225 NYSIPA 230 (549)
T ss_dssp CCEEEC
T ss_pred CccccC
Confidence 754433
No 81
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.79 E-value=6.3e-19 Score=173.96 Aligned_cols=169 Identities=18% Similarity=0.185 Sum_probs=115.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCC---------------------------cc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDH---------------------------PE 70 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~---------------------------~~ 70 (334)
..++|+|||||++|+++|..|++.+ .+|+|||+++.+||.|....+|+. ..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g--~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~ 85 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAG--MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFAS 85 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCC--CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCC
Confidence 4579999999999999999999976 899999999999988765444421 12
Q ss_pred hhHHHHHHHHHhhcCCc--EEEeCeEEce----------EEecccc-eeccCeEEEecc--CCCCCCCCCCCccC-CC-c
Q 019876 71 TKIVINQFSRVVQHERC--SFFGNVTLGS----------SVSLSEL-RQLYHVVVLAYG--AESDRALGIPGEDL-IG-V 133 (334)
Q Consensus 71 ~~~~~~~~~~~~~~~~i--~~~~~~~v~~----------~v~~~~~-~~~yd~lIlATG--s~~p~~~~ipG~~~-~~-v 133 (334)
..++..++....++.++ .++.++.|.. .+.+.++ .+.||+||+||| + .|+.|++||.+. .+ +
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s-~p~~p~ipG~~~f~g~~ 164 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLS-ASRMPDIKGIDSFKGES 164 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCB-C---CCCTTGGGCCSEE
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCC-CCcCCCCCCccccCCCe
Confidence 34667777777777666 5666654421 3444444 468999999999 5 588899999762 22 1
Q ss_pred cchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
+....+...+...++ .....+|+|+|||+|.+|+|+|..|++ . +++||+++|++
T Consensus 165 ~h~~~~~~~~~~~~~-----~~~~~~krV~VIG~G~tgve~a~~la~--------------------~-~~~Vtv~~r~~ 218 (545)
T 3uox_A 165 FHSSRWPTDAEGAPK-----GVDFTGKRVGVIGTGATGVQIIPIAAE--------------------T-AKELYVFQRTP 218 (545)
T ss_dssp EEGGGCCBCTTSCBS-----CCCCBTCEEEEECCSHHHHHHHHHHTT--------------------T-BSEEEEEESSC
T ss_pred EEccccccccccccc-----ccccCCCeEEEECCCccHHHHHHHHHh--------------------h-CCEEEEEEcCC
Confidence 221111100000000 011268999999999999999999996 3 46899999998
Q ss_pred cc
Q 019876 214 PV 215 (334)
Q Consensus 214 ~~ 215 (334)
.+
T Consensus 219 ~~ 220 (545)
T 3uox_A 219 NW 220 (545)
T ss_dssp CC
T ss_pred Cc
Confidence 74
No 82
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.79 E-value=5.7e-20 Score=179.70 Aligned_cols=216 Identities=17% Similarity=0.187 Sum_probs=127.0
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC-ccccccccCCCCcchhHHHHHHHHH--hhcCCcEEEeC
Q 019876 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP-FGLVRSGVAPDHPETKIVINQFSRV--VQHERCSFFGN 92 (334)
Q Consensus 16 ~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~-gg~~~~~~~p~~~~~~~~~~~~~~~--~~~~~i~~~~~ 92 (334)
...+++|||||||+||+++|..|.+.+ ++|+|||++++. +..+.+.+..+.....++...+... ....+++|+.+
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~--~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~ 116 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKK--YNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEA 116 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTT--CEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCC--CcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEE
Confidence 445679999999999999999998875 999999998642 1111121212222222222222222 23457888766
Q ss_pred eEEce-----EEecc---------------------cceeccCeEEEeccCCCCCCCCCCCccC-----CCccchhhHHH
Q 019876 93 VTLGS-----SVSLS---------------------ELRQLYHVVVLAYGAESDRALGIPGEDL-----IGVHSAREFVW 141 (334)
Q Consensus 93 ~~v~~-----~v~~~---------------------~~~~~yd~lIlATGs~~p~~~~ipG~~~-----~~v~~~~~~~~ 141 (334)
..... .+.++ ..+++||+||||||+ .|..+++||.+. ..+-.+..+..
T Consensus 117 ~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs-~~~~~~ipG~~e~a~~l~t~~dA~~ir~ 195 (502)
T 4g6h_A 117 EATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA-EPNTFGIPGVTDYGHFLKEIPNSLEIRR 195 (502)
T ss_dssp EEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC-EECCTTCTTHHHHCEECSSHHHHHHHHH
T ss_pred EEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc-ccccCCccCcccccCCCCCHHHHHHHHH
Confidence 54321 22221 224689999999999 588899999642 12222222111
Q ss_pred HhcCCCCC----CCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcccc
Q 019876 142 WYNGHPDG----KNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA 217 (334)
Q Consensus 142 ~~~~~~~~----~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~ 217 (334)
.+....+. ....+......+++|||||++|+|+|..|+....+. +. .....+. .. .+|+++++.++++.
T Consensus 196 ~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~----l~-~~~~~~~-~~-~~V~lve~~~~il~ 268 (502)
T 4g6h_A 196 TFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQD----LR-KFLPALA-EE-VQIHLVEALPIVLN 268 (502)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHT----HH-HHCHHHH-HH-CEEEEECSSSSSST
T ss_pred HHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHH----HH-hhccccc-cc-ceeEEecccccccc
Confidence 11000000 000000012358999999999999999987411000 00 0000111 12 36999999999998
Q ss_pred CCCH---HHHHHHHcCCceEEEEccCc
Q 019876 218 ACTA---KELREILGIKNLYVHIREDD 241 (334)
Q Consensus 218 ~~~~---~~~~~~l~~~gv~~~~~~~~ 241 (334)
.|++ +.+.+.|++.||+++++...
T Consensus 269 ~~~~~~~~~~~~~L~~~GV~v~~~~~v 295 (502)
T 4g6h_A 269 MFEKKLSSYAQSHLENTSIKVHLRTAV 295 (502)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEETTEEE
T ss_pred CCCHHHHHHHHHHHHhcceeeecCceE
Confidence 8886 46677888999999987544
No 83
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.79 E-value=1.6e-18 Score=160.73 Aligned_cols=163 Identities=15% Similarity=0.172 Sum_probs=117.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc-------------CCC---------CcchhHHHH
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV-------------APD---------HPETKIVIN 76 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~-------------~p~---------~~~~~~~~~ 76 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+.+.+||.|.+.. .++ +....++..
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g--~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSG--LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLA 80 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSS--CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHH
Confidence 368999999999999999999997 99999999988888765311 111 112256778
Q ss_pred HHHHHhhcCCcEEEeCeEEce--------E-EecccceeccCeEEEeccCC-CCCCCCCCCccC-CC-ccchhhHHHHhc
Q 019876 77 QFSRVVQHERCSFFGNVTLGS--------S-VSLSELRQLYHVVVLAYGAE-SDRALGIPGEDL-IG-VHSAREFVWWYN 144 (334)
Q Consensus 77 ~~~~~~~~~~i~~~~~~~v~~--------~-v~~~~~~~~yd~lIlATGs~-~p~~~~ipG~~~-~~-v~~~~~~~~~~~ 144 (334)
++.+++++.+++++.++.+.. . +...++.+.||+||+|||++ .|..|++||.+. .+ ++....+
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~----- 155 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHY----- 155 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGC-----
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccC-----
Confidence 888888888999888765421 2 55556667999999999963 477788998752 11 1111111
Q ss_pred CCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC-cccc
Q 019876 145 GHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG-PVQA 217 (334)
Q Consensus 145 ~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~-~~~~ 217 (334)
.+. ....+++|+|||+|++|+|+|..|++ .+ +|+++.|+. .++.
T Consensus 156 --~~~-----~~~~~~~v~VvG~G~~g~e~a~~l~~--------------------~~--~v~~v~~~~~~~~~ 200 (357)
T 4a9w_A 156 --STP-----APFAGMRVAIIGGGNSGAQILAEVST--------------------VA--ETTWITQHEPAFLA 200 (357)
T ss_dssp --CCS-----GGGTTSEEEEECCSHHHHHHHHHHTT--------------------TS--EEEEECSSCCCBCC
T ss_pred --CCh-----hhcCCCEEEEECCCcCHHHHHHHHHh--------------------hC--CEEEEECCCCeecc
Confidence 111 11267999999999999999999996 44 499999984 4433
No 84
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.79 E-value=8.1e-19 Score=175.21 Aligned_cols=184 Identities=15% Similarity=0.207 Sum_probs=122.9
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC-C-------CCccccc-cccCCCC-------------------
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL-P-------TPFGLVR-SGVAPDH------------------- 68 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~-~-------~~gg~~~-~~~~p~~------------------- 68 (334)
...++|+||||||||++||.+|++.+ .+|+|||+. + ..||.+. .++.|.+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g--~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYG--AKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTT--CCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccEEEECCCccHHHHHHHHHhCC--CeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 34689999999999999999999997 999999973 2 2555432 1222211
Q ss_pred ---------cchhHHHHHH-----------HHHhhcCCcEEEeCeEE--c-eEE--ecccc---eeccCeEEEeccCCCC
Q 019876 69 ---------PETKIVINQF-----------SRVVQHERCSFFGNVTL--G-SSV--SLSEL---RQLYHVVVLAYGAESD 120 (334)
Q Consensus 69 ---------~~~~~~~~~~-----------~~~~~~~~i~~~~~~~v--~-~~v--~~~~~---~~~yd~lIlATGs~~p 120 (334)
....++..++ ...+...+++++.+... + ..+ ...++ .+.||+||||||+ .|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v~~~~g~~~~~~~d~lviAtGs-~p 261 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGE-RP 261 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEEECCCE-EE
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEEEeCCCCeEEEEeCEEEEeCCC-CC
Confidence 1112222222 12244568888765432 1 122 22233 4689999999999 69
Q ss_pred CCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhc
Q 019876 121 RALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEG 200 (334)
Q Consensus 121 ~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~ 200 (334)
+.|++||.+.. +++..++. ... ..+++|+|||||++|+|+|..|++
T Consensus 262 ~~p~i~G~~~~-~~~~~~~~----~~~---------~~~~~vvViGgG~~g~E~A~~l~~-------------------- 307 (598)
T 2x8g_A 262 KYPEIPGAVEY-GITSDDLF----SLP---------YFPGKTLVIGASYVALECAGFLAS-------------------- 307 (598)
T ss_dssp CCCSSTTHHHH-CEEHHHHT----TCS---------SCCCSEEEECCSHHHHHHHHHHHH--------------------
T ss_pred CCCCCCCcccc-eEcHHHHh----hCc---------cCCCEEEEECCCHHHHHHHHHHHH--------------------
Confidence 99999996432 22332221 111 146789999999999999999996
Q ss_pred CCcceEEEEeecCccccCCCH---HHHHHHHcCCceEEEEcc
Q 019876 201 SSIRKVYLVGRRGPVQAACTA---KELREILGIKNLYVHIRE 239 (334)
Q Consensus 201 ~~~~~Vtiv~r~~~~~~~~~~---~~~~~~l~~~gv~~~~~~ 239 (334)
.|. +||+++|+ .++..+++ +.+.+.|+..||+++++.
T Consensus 308 ~g~-~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~ 347 (598)
T 2x8g_A 308 LGG-DVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLC 347 (598)
T ss_dssp TTC-CEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETE
T ss_pred cCC-EEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECC
Confidence 676 59999998 56666654 456667788899999864
No 85
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.74 E-value=8.2e-19 Score=171.26 Aligned_cols=172 Identities=15% Similarity=0.109 Sum_probs=104.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc-ccc------ccccCCC---------Cc--------chhH
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF-GLV------RSGVAPD---------HP--------ETKI 73 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g-g~~------~~~~~p~---------~~--------~~~~ 73 (334)
..++|+|||||+||++||..|++.+++.+|+|||+++.++ ..+ .++..+. +. ...+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 4579999999999999999999886679999999987542 111 1110000 00 0000
Q ss_pred HHHHHHHH--hhcCCcEEEeCeEEc------eEEecccc-eeccCeEEEeccCCCCCCCCCCCcc----CCCccchhhHH
Q 019876 74 VINQFSRV--VQHERCSFFGNVTLG------SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGED----LIGVHSAREFV 140 (334)
Q Consensus 74 ~~~~~~~~--~~~~~i~~~~~~~v~------~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~----~~~v~~~~~~~ 140 (334)
......++ +.+.+++++.++.+. ..+.+.++ .+.||+||||||+ .|+.|+++|.. .++++..++..
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g~~i~yd~lviATGs-~p~~~~~~~~~~~~~~~~v~~~~~~~ 168 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG-TPRSLSAIDRAGAEVKSRTTLFRKIG 168 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEETTSCEEEEEEEEECCCE-EECCCHHHHTSCHHHHHTEEECCSHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEECCCCEEECCEEEECCCC-CCCCCCCcccccccccCceEEEcCHH
Confidence 00000000 124578988875442 24555544 3689999999999 58877766532 23444332221
Q ss_pred H--HhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccc
Q 019876 141 W--WYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (334)
Q Consensus 141 ~--~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~ 216 (334)
. .+.. .+..+++|+|||+|++|+|+|..|++ ..++.|. +|+++++.+.++
T Consensus 169 d~~~l~~---------~~~~~~~vvViGgG~iG~E~A~~l~~----------------~~~~~g~-~V~~v~~~~~~~ 220 (493)
T 1m6i_A 169 DFRSLEK---------ISREVKSITIIGGGFLGSELACALGR----------------KARALGT-EVIQLFPEKGNM 220 (493)
T ss_dssp HHHHHHH---------HHHHCSEEEEECCSHHHHHHHHHHHH----------------HHHHHTC-EEEEECSSSSTT
T ss_pred HHHHHHH---------HhhcCCeEEEECCCHHHHHHHHHHHh----------------hhhhcCC-EEEEEecCcccc
Confidence 1 0110 01247999999999999999999874 0111244 699998876543
No 86
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.72 E-value=7.4e-17 Score=159.21 Aligned_cols=163 Identities=17% Similarity=0.241 Sum_probs=114.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCC---------------------------Ccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPD---------------------------HPE 70 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~---------------------------~~~ 70 (334)
..++|+|||||++|+++|..|++.+ .+|+|||+.+.+||.|....+|+ +..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G--~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~ 92 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELG--RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYAS 92 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCB
T ss_pred CCCCEEEECccHHHHHHHHHHHhCC--CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCC
Confidence 4579999999999999999999997 89999999988888775333232 111
Q ss_pred hhHHHHHHHHHhhcCC--cEEEeCeEEce----------EEecccc-eeccCeEEEeccCC-CCCCCCCCCcc-CCC--c
Q 019876 71 TKIVINQFSRVVQHER--CSFFGNVTLGS----------SVSLSEL-RQLYHVVVLAYGAE-SDRALGIPGED-LIG--V 133 (334)
Q Consensus 71 ~~~~~~~~~~~~~~~~--i~~~~~~~v~~----------~v~~~~~-~~~yd~lIlATGs~-~p~~~~ipG~~-~~~--v 133 (334)
..++..++....++.+ ++++.++.|.. .+.+.++ .+.||+||+|||.. .|+.|++||.+ .+| +
T Consensus 93 ~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~ 172 (542)
T 1w4x_A 93 QPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLY 172 (542)
T ss_dssp HHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEE
T ss_pred HHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCCCCCCCCCcccCCCceE
Confidence 2345666666666554 45666654421 2334444 46899999999963 47888899975 344 3
Q ss_pred cchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 134 HSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
++. .+ .. +. .+ ..+|+|+|||+|.+|+|+|..|++ .+ .+|+++.|++
T Consensus 173 hs~-~~----~~--~~----~~-~~gk~V~VIG~G~sg~e~a~~l~~--------------------~~-~~vtv~~r~~ 219 (542)
T 1w4x_A 173 HTG-NW----PH--EP----VD-FSGQRVGVIGTGSSGIQVSPQIAK--------------------QA-AELFVFQRTP 219 (542)
T ss_dssp EGG-GC----CS--SC----CC-CBTCEEEEECCSHHHHHHHHHHHH--------------------HB-SEEEEEESSC
T ss_pred ECC-CC----CC--ch----hc-cCCCEEEEECCCccHHHHHHHHhh--------------------cC-ceEEEEEcCC
Confidence 322 11 10 10 01 268999999999999999999986 34 5799999997
Q ss_pred cc
Q 019876 214 PV 215 (334)
Q Consensus 214 ~~ 215 (334)
.+
T Consensus 220 ~~ 221 (542)
T 1w4x_A 220 HF 221 (542)
T ss_dssp CC
T ss_pred cc
Confidence 66
No 87
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.72 E-value=3.2e-18 Score=164.53 Aligned_cols=199 Identities=13% Similarity=0.126 Sum_probs=126.6
Q ss_pred CCeEEEECCchHHHHHHHHHhh-cCCCCeEEEEcCCCCCccccc-cccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPTPFGLVR-SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~-~~~~~~v~vie~~~~~gg~~~-~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
+++|+|||||+||+++|..|++ .+++.+|+|||+++....... ..+..+.....++...+.++++..+++++.+....
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~ 83 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQ 83 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTTCEEECSCEEE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCCCEEEEeEEEE
Confidence 4799999999999999999998 112499999999875321110 01112223344555556677778899998765442
Q ss_pred -----eEEecccce-eccCeEEEeccCCCCCCCCCCCccCC-----CccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEE
Q 019876 97 -----SSVSLSELR-QLYHVVVLAYGAESDRALGIPGEDLI-----GVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVIL 165 (334)
Q Consensus 97 -----~~v~~~~~~-~~yd~lIlATGs~~p~~~~ipG~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVI 165 (334)
..+.++++. +.||+||+|||+ .|+.+++||.+.. .+++..+......... .+..+++++||
T Consensus 84 id~~~~~V~~~~g~~i~~d~lviAtG~-~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~-------~~~~~~~~vVV 155 (437)
T 3sx6_A 84 IDAEAQNITLADGNTVHYDYLMIATGP-KLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQ-------ALLREPGPIVI 155 (437)
T ss_dssp EETTTTEEEETTSCEEECSEEEECCCC-EECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHH-------HHHHSCCCEEE
T ss_pred EEcCCCEEEECCCCEEECCEEEECCCC-CcCcccCCCCCcccCcceecccccHHHHHHHHHH-------HHHhCCCEEEE
Confidence 245555554 689999999999 5888889997642 2333322221111000 00123567899
Q ss_pred cCCHH----H--HHHHHHHccCCcccccccccHHHHHHHhcCCcc---e-EEEEeecCccc----cCC--CHHHHHHHHc
Q 019876 166 GQGNV----A--LDVARILLRPTEELATTDIASYAWTALEGSSIR---K-VYLVGRRGPVQ----AAC--TAKELREILG 229 (334)
Q Consensus 166 G~G~~----g--~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~---~-Vtiv~r~~~~~----~~~--~~~~~~~~l~ 229 (334)
|+|.. | +|+|..++. .+++.|.+ + |+++++.+.+. ..+ ..+.+.+.|+
T Consensus 156 GgG~~~g~~G~~~E~a~~la~----------------~l~~~g~~~~~~~Vtlv~~~~~~~~~~l~~~~~~~~~~~~~l~ 219 (437)
T 3sx6_A 156 GAMAGASCFGPAYEYAMIVAS----------------DLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLK 219 (437)
T ss_dssp EECTTCCCCHHHHHHHHHHHH----------------HHHHTTCGGGCSCEEEEESSSSTTCTTTTCCTTHHHHHHHHHH
T ss_pred EcCCCCCcCcHHHHHHHHHHH----------------HHHHcCCcccCcEEEEEcCCccccccccCcchHHHHHHHHHHH
Confidence 98654 4 888866553 23335543 2 99999988652 222 2467788889
Q ss_pred CCceEEEEccCc
Q 019876 230 IKNLYVHIREDD 241 (334)
Q Consensus 230 ~~gv~~~~~~~~ 241 (334)
..||+++.+...
T Consensus 220 ~~gI~~~~~~~v 231 (437)
T 3sx6_A 220 EEGIEAYTNCKV 231 (437)
T ss_dssp HTTCEEECSEEE
T ss_pred HCCCEEEcCCEE
Confidence 999999876543
No 88
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.68 E-value=2.8e-16 Score=153.28 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=102.3
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccccc--CCCCc-chhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGV--APDHP-ETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~--~p~~~-~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
++|+|||||++|+++|.+|++. .+|+|||+++.+||.+.+.. ..++. ...++...+.+.+ ..+++++.+..+.
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~~~~~~v~ 184 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKIYLETSAL 184 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEEETTEEEC
T ss_pred CCEEEECccHHHHHHHHHHHhc---CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEEEcCCEEE
Confidence 5899999999999999999987 89999999998888775421 11111 2345555555555 6689888776652
Q ss_pred e--------EEe-cccc---eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEE
Q 019876 97 S--------SVS-LSEL---RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVI 164 (334)
Q Consensus 97 ~--------~v~-~~~~---~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvV 164 (334)
. .+. ..+. .+.||+||||||+ .|+.|++||.+.+++++..++....+... ...+++++|
T Consensus 185 ~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa-~~~~~~~~g~~~~gv~~~~~~~~~~~~~~--------~~~~~~vvV 255 (493)
T 1y56_A 185 GVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA-IDSTMLFENNDMPGVFRRDFALEVMNVWE--------VAPGRKVAV 255 (493)
T ss_dssp CCEECSSSEEEEEEETTEEEEEEESCEEECCCE-EECCCCCTTTTSTTEEEHHHHHHHHHTSC--------BCSCSEEEE
T ss_pred EEEcCCcEEEEEEecCCeEEEEECCEEEECCCC-CccCCCCCCCCCCCEEEcHHHHHHHHhcc--------cCCCCEEEE
Confidence 1 111 1222 3689999999999 58889999999999998776654332211 225799999
Q ss_pred EcCCHHHHH
Q 019876 165 LGQGNVALD 173 (334)
Q Consensus 165 IG~G~~g~e 173 (334)
||+|++|+|
T Consensus 256 iGgG~~gle 264 (493)
T 1y56_A 256 TGSKADEVI 264 (493)
T ss_dssp ESTTHHHHH
T ss_pred ECCCHHHHH
Confidence 999999998
No 89
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.67 E-value=6.8e-17 Score=153.76 Aligned_cols=195 Identities=13% Similarity=0.090 Sum_probs=123.3
Q ss_pred CeEEEECCchHHHHHHHHHhh-cCCCCeEEEEcCCCCCcccccc-ccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 20 LRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~-~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
++|+|||||++|+++|..|++ .+++.+|+|||+++..+..... ...++.....++...+.+.+++.+++++.+....
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKI 81 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGTCEEEECEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEE
Confidence 689999999999999999999 2224999999998764322111 1112222233444456667777899998874432
Q ss_pred ----eEEecccce-----eccCeEEEeccCCCCCCCCCCCccC--CCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEE
Q 019876 97 ----SSVSLSELR-----QLYHVVVLAYGAESDRALGIPGEDL--IGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVIL 165 (334)
Q Consensus 97 ----~~v~~~~~~-----~~yd~lIlATGs~~p~~~~ipG~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVI 165 (334)
..+.+.+.. +.||+||+|||+ .|..+++||.+. ..+++..+......... . ..++++||
T Consensus 82 ~~~~~~V~~~~g~~~~~~~~~d~lViAtG~-~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~-------~--~~~~~vVi 151 (409)
T 3h8l_A 82 DAKSSMVYYTKPDGSMAEEEYDYVIVGIGA-HLATELVKGWDKYGYSVCEPEFATKLREKLE-------S--FQGGNIAI 151 (409)
T ss_dssp ETTTTEEEEECTTSCEEEEECSEEEECCCC-EECGGGSBTHHHHCEESSSTTHHHHHHHHHH-------H--CCSEEEEE
T ss_pred eCCCCEEEEccCCcccceeeCCEEEECCCC-CcCccCCCChhhcCcCcCCHHHHHHHHHHHH-------H--hcCCeEEE
Confidence 134443333 689999999999 588888998753 12222211111100000 0 12567799
Q ss_pred cCCH-------------------------HHHHHHHHHccCCcccccccccHHHHHHHhcCCc---ceEEEEeecCcccc
Q 019876 166 GQGN-------------------------VALDVARILLRPTEELATTDIASYAWTALEGSSI---RKVYLVGRRGPVQA 217 (334)
Q Consensus 166 G~G~-------------------------~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~Vtiv~r~~~~~~ 217 (334)
|+|. +++|+|..++. .+++.|. .+|+++++.+ ++.
T Consensus 152 G~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~----------------~l~~~g~~~~~~v~~~~~~~-~l~ 214 (409)
T 3h8l_A 152 GSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHG----------------YFKKKGMLDKVHVTVFSPGE-YLS 214 (409)
T ss_dssp EECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHH----------------HHHTTTCTTTEEEEEECSSS-SST
T ss_pred EecccccCCCccccccccccCCCCcccCCHHHHHHHHHHH----------------HHHHcCCCCCeEEEEEeCCc-ccc
Confidence 9992 57888865542 2333553 3699999988 555
Q ss_pred CCCH---HHHHHHHcCCceEEEEccCc
Q 019876 218 ACTA---KELREILGIKNLYVHIREDD 241 (334)
Q Consensus 218 ~~~~---~~~~~~l~~~gv~~~~~~~~ 241 (334)
.++. +.+.+.++..||+++.+...
T Consensus 215 ~~~~~~~~~~~~~l~~~gV~~~~~~~v 241 (409)
T 3h8l_A 215 DLSPNSRKAVASIYNQLGIKLVHNFKI 241 (409)
T ss_dssp TBCHHHHHHHHHHHHHHTCEEECSCCE
T ss_pred ccCHHHHHHHHHHHHHCCCEEEcCCce
Confidence 5554 55677788889999986543
No 90
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.66 E-value=6.8e-18 Score=160.14 Aligned_cols=109 Identities=20% Similarity=0.162 Sum_probs=73.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc-cccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR-SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~-~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
.+||||||||+||++||.+|++.+++.+|+|||+++..+.+.. +.+..+....+++...+.. +...+++++.+..+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~-~~~~gv~~i~~~v~~i 80 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDG-LRAHGIQVVHDSALGI 80 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHH-HHHTTCEEECSCEEEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHH-HHHCCCEEEEeEEEEE
Confidence 5799999999999999999999887899999999875322111 0010111112222222222 334689998886653
Q ss_pred ----eEEecccc-eeccCeEEEeccCCCCCCCCCCCcc
Q 019876 97 ----SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGED 129 (334)
Q Consensus 97 ----~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~ 129 (334)
+.+.+.++ ++.||+||||||+ .+..+++||.+
T Consensus 81 d~~~~~v~~~~g~~i~yd~LviAtG~-~~~~~~i~G~~ 117 (401)
T 3vrd_B 81 DPDKKLVKTAGGAEFAYDRCVVAPGI-DLLYDKIEGYS 117 (401)
T ss_dssp ETTTTEEEETTSCEEECSEEEECCCE-EECGGGSBTCC
T ss_pred EccCcEEEecccceeecceeeeccCC-ccccCCccCch
Confidence 23455544 4699999999999 58888899865
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.65 E-value=9.8e-18 Score=160.85 Aligned_cols=203 Identities=13% Similarity=0.115 Sum_probs=117.6
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc-cccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc--
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG-- 96 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~-~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~-- 96 (334)
++|||||||+||++||.+|++.+++.+|+|||+++...-. ..+.+..+....+++...+.+++++.+++|+.+....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id 82 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESID 82 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCCcEEEEeEEEEEE
Confidence 5899999999999999999998888999999998753111 0001111122223333344566777899999886543
Q ss_pred ---eEEecccc-eeccCeEEEeccCCCCCCCCCCCcc--CCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHH
Q 019876 97 ---SSVSLSEL-RQLYHVVVLAYGAESDRALGIPGED--LIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNV 170 (334)
Q Consensus 97 ---~~v~~~~~-~~~yd~lIlATGs~~p~~~~ipG~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~ 170 (334)
+.|.++++ +++||+||||||+. + .+++||.+ ...+.+..+.....+... ++..++.++|+|++ .
T Consensus 83 ~~~~~V~~~~g~~i~YD~LViAtG~~-~-~~~i~G~~e~~~~~~~~~~a~~~~~~l~-------~~~~~~~~vv~gg~-~ 152 (430)
T 3hyw_A 83 PDANTVTTQSGKKIEYDYLVIATGPK-L-VFGAEGQEENSTSICTAEHALETQKKLQ-------ELYANPGPVVIGAI-P 152 (430)
T ss_dssp TTTTEEEETTCCEEECSEEEECCCCE-E-ECCSBTHHHHSCCCSSHHHHHHHHHHHH-------HHHHSCCCEEEEEC-T
T ss_pred CCCCEEEECCCCEEECCEEEEeCCCC-c-cCCccCcccCcCCcccHHHHHHHHHHHH-------hhccCCceEEEeCC-C
Confidence 35666665 46999999999994 4 35788864 223333322221111000 01134456666655 3
Q ss_pred HHHHHHHHccCCcccccccccHHHHHHHhcCCc---ceEEEEeecCcccc---CC---CHHHHHHHHcCCceEEEEccCc
Q 019876 171 ALDVARILLRPTEELATTDIASYAWTALEGSSI---RKVYLVGRRGPVQA---AC---TAKELREILGIKNLYVHIREDD 241 (334)
Q Consensus 171 g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~Vtiv~r~~~~~~---~~---~~~~~~~~l~~~gv~~~~~~~~ 241 (334)
|++++..+.+ +.......+++.+. -+|+++...+.+.. .. ..+.+.+.++..||+++++...
T Consensus 153 gve~~~~~~e---------~a~~~~~~l~~~g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~~~GV~~~~~~~v 223 (430)
T 3hyw_A 153 GVSCFGPAYE---------FALMLHYELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDWIANVAV 223 (430)
T ss_dssp TCCCCHHHHH---------HHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEEECSCEE
T ss_pred cEEEhHHHHH---------HHHHHHHHHHHhcccccceeeeecccchhhhccchhhHHHHHHHHHHHHhCCeEEEeCceE
Confidence 4443322221 11112223333332 14788876654321 11 1256778889999999987654
No 92
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.62 E-value=1e-16 Score=153.64 Aligned_cols=199 Identities=13% Similarity=0.089 Sum_probs=120.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc-ccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS-GVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~-~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
+++|+|||||+||+++|.+|++.+++.+|+|||+++..+..... ...++.....++...+.++++..+++++.+....
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i 81 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFNIEFINEKAESI 81 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGTEEEECSCEEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcCCEEEEEEEEEE
Confidence 36999999999999999999995446999999998765432211 1111222223333344556667899998765432
Q ss_pred ----eEEecccce-eccCeEEEeccCCCCCCCCCCCc-cCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHH
Q 019876 97 ----SSVSLSELR-QLYHVVVLAYGAESDRALGIPGE-DLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNV 170 (334)
Q Consensus 97 ----~~v~~~~~~-~~yd~lIlATGs~~p~~~~ipG~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~ 170 (334)
..+.+.++. +.||+||+|||+ .|..+++... ....+.+..+......... .+..+++++|||+|..
T Consensus 82 d~~~~~v~~~~g~~i~~d~liiAtG~-~~~~pg~~~~g~~~~~~~~~~a~~~~~~~~-------~~~~~~~~vVVGgG~~ 153 (430)
T 3h28_A 82 DPDANTVTTQSGKKIEYDYLVIATGP-KLVFGAEGQEENSTSICTAEHALETQKKLQ-------ELYANPGPVVIGAIPG 153 (430)
T ss_dssp ETTTTEEEETTCCEEECSEEEECCCC-EEECCSBTHHHHSCCCSSHHHHHHHHHHHH-------HHHHSCCCEEEEECTT
T ss_pred ECCCCEEEECCCcEEECCEEEEcCCc-ccccCCCCCcCCccCcCCHHHHHHHHHHHH-------HHHhcCCeEEEEcCCC
Confidence 235555544 689999999999 4554422110 0122333333322111000 0112356789999765
Q ss_pred H------HHHHHHHccCCcccccccccHHHHHHHhcCCc---ceEEEEeecCccc----cCC--CHHHHHHHHcCCceEE
Q 019876 171 A------LDVARILLRPTEELATTDIASYAWTALEGSSI---RKVYLVGRRGPVQ----AAC--TAKELREILGIKNLYV 235 (334)
Q Consensus 171 g------~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~---~~Vtiv~r~~~~~----~~~--~~~~~~~~l~~~gv~~ 235 (334)
| +|+|..++. .+++.|. .+|+++.+.+.+. ..+ ..+.+.+.++..||++
T Consensus 154 ~~~~G~~~E~a~~la~----------------~l~~~g~~~~~~V~~v~~~~~~~~~~l~~~~~~~~~l~~~l~~~GV~i 217 (430)
T 3h28_A 154 VSCFGPAYEFALMLHY----------------ELKKRGIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFAERNIDW 217 (430)
T ss_dssp CCCCHHHHHHHHHHHH----------------HHHHTTCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHHHTTCEE
T ss_pred CCcCcHHHHHHHHHHH----------------HHHHcCCccceEEEEecCCccccccccCcchHHHHHHHHHHHHCCCEE
Confidence 4 888866653 2223453 2599999887652 211 2467888899999999
Q ss_pred EEccCc
Q 019876 236 HIREDD 241 (334)
Q Consensus 236 ~~~~~~ 241 (334)
+.+...
T Consensus 218 ~~~~~v 223 (430)
T 3h28_A 218 IANVAV 223 (430)
T ss_dssp ECSCEE
T ss_pred EeCCEE
Confidence 987544
No 93
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.57 E-value=4.5e-14 Score=137.93 Aligned_cols=171 Identities=15% Similarity=0.125 Sum_probs=112.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcC------------CCCeEEEEcCCCCCc---ccccccc------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAH------------QEAQVDIIDRLPTPF---GLVRSGV------------------ 64 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~------------~~~~v~vie~~~~~g---g~~~~~~------------------ 64 (334)
..++|||||+||+||++|..|.+.+ .......+|+.+..+ |++..+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCC
Confidence 3468999999999999999997653 134677888876422 1110000
Q ss_pred --------------------CCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce----------------EEecccc----
Q 019876 65 --------------------APDHPETKIVINQFSRVVQHERCSFFGNVTLGS----------------SVSLSEL---- 104 (334)
Q Consensus 65 --------------------~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~----------------~v~~~~~---- 104 (334)
...++...++.+|+.++.++++..+++++.|.. .|+..+.
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~ 197 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE 197 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC
T ss_pred ccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCce
Confidence 011233457888888888887777777766521 1222221
Q ss_pred --eeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHccCC
Q 019876 105 --RQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLRPT 182 (334)
Q Consensus 105 --~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~~~ 182 (334)
...++.||+|||. .|..|+.++.. ..+++..++........ ..-..+|+|+|||+|.+|+|++..|++
T Consensus 198 ~~~~~ar~vVlatG~-~P~iP~~~~~~-g~v~Hss~y~~~~~~~~------~~~~~gKrV~VVG~G~SA~ei~~~L~~-- 267 (501)
T 4b63_A 198 ISARRTRKVVIAIGG-TAKMPSGLPQD-PRIIHSSKYCTTLPALL------KDKSKPYNIAVLGSGQSAAEIFHDLQK-- 267 (501)
T ss_dssp EEEEEEEEEEECCCC-EECCCTTSCCC-TTEEEGGGHHHHHHHHS------CCTTSCCEEEEECCSHHHHHHHHHHHH--
T ss_pred EEEEEeCEEEECcCC-CCCCCCCCCCC-cceeeccccccchhhcc------ccccCCcEEEEECCcHHHHHHHHHHHh--
Confidence 2468999999997 57776655432 34666666654432111 112378999999999999999999975
Q ss_pred cccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 183 EELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.....+|+++.|+..+
T Consensus 268 -----------------~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 268 -----------------RYPNSRTTLIMRDSAM 283 (501)
T ss_dssp -----------------HSTTCEEEEECSSSSC
T ss_pred -----------------cCCCceEEEEeCCCcc
Confidence 2344579999999654
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.29 E-value=8.5e-14 Score=128.41 Aligned_cols=139 Identities=17% Similarity=0.120 Sum_probs=89.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc-cCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG-VAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~-~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..+|+||||||||++||.+|++...+++|+|||+.+.+||.+.++ +.+...... .....++++.++++..+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~---~~~~~~~~e~Gv~~~~~~~--- 138 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMR---KPAHLFLQELEIPYEDEGD--- 138 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTTCCCEEEE---TTTHHHHHHTTCCCEECSS---
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCccCCHHHHH---HHHHHHHHHcCCEEEECCc---
Confidence 468999999999999999997643359999999999999987763 222222111 1223345566777654321
Q ss_pred EEecccceeccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHH
Q 019876 98 SVSLSELRQLYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARI 177 (334)
Q Consensus 98 ~v~~~~~~~~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~ 177 (334)
.....+.++++++. .++.++++|.+........++.. + + .....+++++|||+|+++++.|..
T Consensus 139 ------~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~--~---~-----~~~~~~~~v~viggg~~av~~a~~ 201 (326)
T 3fpz_A 139 ------YVVVKHAALFISTV-LSKVLQLPNVKLFNATCVEDLVT--R---P-----PTEKGEVTVAGVVTNWTLVTQAHG 201 (326)
T ss_dssp ------EEEESCHHHHHHHH-HHHHHTSTTEEEETTEEEEEEEE--E---S-----SCSSSSCEEEEEEEEEHHHHTCTT
T ss_pred ------ceecceeEEEEcch-hhhccccccceeecccccceeec--c---C-----CcccCCCEEEEEccCceeeehhhh
Confidence 11233445556665 46677888876333322222211 1 1 123478999999999999999988
Q ss_pred Hcc
Q 019876 178 LLR 180 (334)
Q Consensus 178 L~~ 180 (334)
+..
T Consensus 202 ~~~ 204 (326)
T 3fpz_A 202 TQC 204 (326)
T ss_dssp SSS
T ss_pred hhh
Confidence 875
No 95
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=2.3e-10 Score=108.49 Aligned_cols=98 Identities=12% Similarity=0.174 Sum_probs=67.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc--------cccc---ccCC--------CCc----------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG--------LVRS---GVAP--------DHP---------- 69 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg--------~~~~---~~~p--------~~~---------- 69 (334)
.++|+|||||++|++||..|++.+ .+|+|+|+.+.+|+ .+.+ ++.| .+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G--~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLG--KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCC--CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 368999999999999999999997 89999999876632 2211 1110 000
Q ss_pred -------------------------chhHHHHHHHHHhhcCCcEEEeCeEEce------------EEecccceeccCeEE
Q 019876 70 -------------------------ETKIVINQFSRVVQHERCSFFGNVTLGS------------SVSLSELRQLYHVVV 112 (334)
Q Consensus 70 -------------------------~~~~~~~~~~~~~~~~~i~~~~~~~v~~------------~v~~~~~~~~yd~lI 112 (334)
...++...+.+.+++.|++++.++.+.. .+...++.+.+|+||
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g~i~ad~VV 161 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLI 161 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTEEEEESEEE
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCCEEECCEEE
Confidence 1234556666777778899988765421 122333456899999
Q ss_pred EeccCC
Q 019876 113 LAYGAE 118 (334)
Q Consensus 113 lATGs~ 118 (334)
+|||+.
T Consensus 162 lAtG~~ 167 (401)
T 2gqf_A 162 VATGGL 167 (401)
T ss_dssp ECCCCS
T ss_pred ECCCCc
Confidence 999985
No 96
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.00 E-value=8.3e-10 Score=105.20 Aligned_cols=109 Identities=20% Similarity=0.241 Sum_probs=69.0
Q ss_pred ccccccCCCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc--------cc---cc--------CCCC-
Q 019876 9 SRSFTALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV--------RS---GV--------APDH- 68 (334)
Q Consensus 9 ~~~~~~~~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~--------~~---~~--------~p~~- 68 (334)
++.+..+.+..++|+|||||++|++||..|++.+ .+|+|+|+.+.+|+.+ .. .. .+.+
T Consensus 17 n~~~~~M~~~~~dViIIGgG~AGl~aA~~La~~G--~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 17 NLYFQSMVAEKQDVVIIGAGAAGMMCAIEAGKRG--RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp -----------CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred ccccccccCCCCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 3444445555689999999999999999999997 9999999998764322 10 00 0111
Q ss_pred ----------------------------------cchhHHHHHHHHHhhcCCcEEEeCeEEce--------EEeccccee
Q 019876 69 ----------------------------------PETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSELRQ 106 (334)
Q Consensus 69 ----------------------------------~~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~v~~~~~~~ 106 (334)
....++...+.+.+++.|++++.++.|.. .+...++.+
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g~i 174 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAGTV 174 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTEEE
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCcEE
Confidence 01124555666677777999998865521 234444567
Q ss_pred ccCeEEEeccCCC
Q 019876 107 LYHVVVLAYGAES 119 (334)
Q Consensus 107 ~yd~lIlATGs~~ 119 (334)
.+|+||+|||..+
T Consensus 175 ~ad~VIlAtG~~S 187 (417)
T 3v76_A 175 DAASLVVASGGKS 187 (417)
T ss_dssp EESEEEECCCCSS
T ss_pred EeeEEEECCCCcc
Confidence 8999999999853
No 97
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.00 E-value=2.1e-09 Score=89.89 Aligned_cols=97 Identities=18% Similarity=0.162 Sum_probs=69.9
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc-cccccCCCC---cchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-VRSGVAPDH---PETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~-~~~~~~p~~---~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
++|+|||||++|+.+|..|.+.+ .+|+|+|+.+..... ......|++ ....++...+.+.+++.+++++.+ .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g--~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~v~~~-~v 78 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAG--LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARRYGAEVRPG-VV 78 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHHTTCEEEEC-CC
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHHcCCEEEeC-EE
Confidence 58999999999999999999997 999999997632111 000011222 234677888888888899999888 44
Q ss_pred ce--------EEecccceeccCeEEEeccCCCC
Q 019876 96 GS--------SVSLSELRQLYHVVVLAYGAESD 120 (334)
Q Consensus 96 ~~--------~v~~~~~~~~yd~lIlATGs~~p 120 (334)
.. .+.++++.+.+|.||+|+|.. |
T Consensus 79 ~~i~~~~~~~~v~~~~g~i~ad~vI~A~G~~-~ 110 (180)
T 2ywl_A 79 KGVRDMGGVFEVETEEGVEKAERLLLCTHKD-P 110 (180)
T ss_dssp CEEEECSSSEEEECSSCEEEEEEEEECCTTC-C
T ss_pred EEEEEcCCEEEEEECCCEEEECEEEECCCCC-C
Confidence 21 244445567899999999994 5
No 98
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.79 E-value=2.2e-08 Score=97.47 Aligned_cols=100 Identities=16% Similarity=0.145 Sum_probs=70.0
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCC----------------CC-------cchhH
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAP----------------DH-------PETKI 73 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p----------------~~-------~~~~~ 73 (334)
...++|+|||||++|+++|..|++.| .+|+|||+.+.+|+.....+.| .+ ....+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G--~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 167 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLG--ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQ 167 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCC--CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHH
Confidence 45689999999999999999999997 9999999987765432111111 00 11135
Q ss_pred HHHHHHHHhhcCCcEEEeCeEEce-----------EEec--c-cc---eeccCeEEEeccCC
Q 019876 74 VINQFSRVVQHERCSFFGNVTLGS-----------SVSL--S-EL---RQLYHVVVLAYGAE 118 (334)
Q Consensus 74 ~~~~~~~~~~~~~i~~~~~~~v~~-----------~v~~--~-~~---~~~yd~lIlATGs~ 118 (334)
+...+.+.+++.|++++.++.+.. .+.+ . ++ .+.+|+||+|+|..
T Consensus 168 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 168 LQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 556667777778999988876521 2333 2 33 35899999999995
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.76 E-value=7.5e-08 Score=84.07 Aligned_cols=98 Identities=18% Similarity=0.099 Sum_probs=64.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCC---c-----------chhHHHHHHHHHhhc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDH---P-----------ETKIVINQFSRVVQH 84 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~---~-----------~~~~~~~~~~~~~~~ 84 (334)
.++|+|||||++|+++|..|++.+ .+|+|+|+.....|.+.....+.+ . ....+...+.+.+++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g--~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKG--VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 479999999999999999999997 999999997433232211000000 0 122455666777777
Q ss_pred C-CcEEEeCeEEce--------EEecccc-eeccCeEEEeccCC
Q 019876 85 E-RCSFFGNVTLGS--------SVSLSEL-RQLYHVVVLAYGAE 118 (334)
Q Consensus 85 ~-~i~~~~~~~v~~--------~v~~~~~-~~~yd~lIlATGs~ 118 (334)
. +++++....... .+.+.++ .+.+|.||+|||.+
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTC
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCC
Confidence 6 898875432211 1333344 46899999999995
No 100
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.75 E-value=5.5e-09 Score=101.11 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=29.5
Q ss_pred eEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 21 RVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 21 ~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
+|+|||+|+||++||..|++.+ .+|+|+|+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G--~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAG--KKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--CCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--CCEEEEeCC
Confidence 6899999999999999999987 999999998
No 101
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.74 E-value=8.2e-08 Score=86.48 Aligned_cols=38 Identities=39% Similarity=0.523 Sum_probs=34.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhc-CCCCeEEEEcCCCCCcc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~-~~~~~v~vie~~~~~gg 58 (334)
.++|+|||||++|+++|..|++. + .+|+|+|+.+.+++
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G--~~V~viEk~~~~gg 77 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPN--VQVAIIEQSVSPGG 77 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTT--SCEEEEESSSSCCT
T ss_pred ccCEEEECccHHHHHHHHHHHHcCC--CeEEEEECCCCCCC
Confidence 46999999999999999999996 6 99999999887654
No 102
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.73 E-value=3.5e-08 Score=98.16 Aligned_cols=130 Identities=16% Similarity=0.140 Sum_probs=76.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC-CCccc-cc--c-cc-----------CCC--------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP-TPFGL-VR--S-GV-----------APD-------------- 67 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~-~~gg~-~~--~-~~-----------~p~-------------- 67 (334)
..++|+|||||+||++||..|++.| .+|+|+|+.+ .+|.. +. . ++ ..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G--~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMG--QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR 104 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCC--CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchh
Confidence 3579999999999999999999997 9999999874 22210 00 0 00 000
Q ss_pred ---------C------cchhHHHHHHHHHhhc-CCcEEEeCeEEce--------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 68 ---------H------PETKIVINQFSRVVQH-ERCSFFGNVTLGS--------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 68 ---------~------~~~~~~~~~~~~~~~~-~~i~~~~~~~v~~--------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
. .....+...+.+.+++ .|++++....... .|.+.++ .+.+|.||+|||++ +..
T Consensus 105 ~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~-s~~ 183 (651)
T 3ces_A 105 ILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF-LDG 183 (651)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT-TCC
T ss_pred hhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC-ccC
Confidence 0 0112345556666666 6888854433211 1223233 36799999999995 555
Q ss_pred CCCCCccCCCccchhhHHHHhcCCCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHcc
Q 019876 123 LGIPGEDLIGVHSAREFVWWYNGHPDGKNLSPDLKSTDTAVILGQGNVALDVARILLR 180 (334)
Q Consensus 123 ~~ipG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~ 180 (334)
+.++|.+. + .+.+ +| |.+++++|..|.+
T Consensus 184 ~~i~G~~~--------~------------------~~gr---iG-g~~a~eLA~~L~~ 211 (651)
T 3ces_A 184 KIHIGLDN--------Y------------------SGGR---AG-DPPSIPLSRRLRE 211 (651)
T ss_dssp EEECC-------------------------------------------CCHHHHHHHT
T ss_pred ccccCccc--------C------------------CCCC---cc-chhhhHHHHHHHh
Confidence 56666531 0 1122 56 8899999999986
No 103
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.66 E-value=8e-08 Score=89.91 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=68.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc---c-----------cccc-------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL---V-----------RSGV------------------- 64 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~---~-----------~~~~------------------- 64 (334)
..++|+|||||++|+++|..|++.+ .+|+|||+.+.+++. . ..++
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G--~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 87 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNG--WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH 87 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC
Confidence 3579999999999999999999997 999999998665321 0 0000
Q ss_pred ------CC--CC----cchhHHHHHHHHHhhcCCcEEEeCeEEce-----EEecccc-eeccCeEEEeccCCC
Q 019876 65 ------AP--DH----PETKIVINQFSRVVQHERCSFFGNVTLGS-----SVSLSEL-RQLYHVVVLAYGAES 119 (334)
Q Consensus 65 ------~p--~~----~~~~~~~~~~~~~~~~~~i~~~~~~~v~~-----~v~~~~~-~~~yd~lIlATGs~~ 119 (334)
.+ +. .....+...+.+.+.+.|++++.++.+.. .+.+.++ .+.+|.||.|+|.++
T Consensus 88 g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 88 NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTC
T ss_pred CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccH
Confidence 00 00 01134556666777777999998876532 3444444 368999999999853
No 104
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.61 E-value=9.8e-08 Score=91.58 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=34.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g 57 (334)
..++|+|||||++|+++|..|++.+ .+|+|+|+.+.+|
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G--~~V~llEk~~~~g 62 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEG--ANVLLLDKGNKLG 62 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC--CCEEEEECCCCCC
Confidence 4579999999999999999999987 9999999987654
No 105
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.57 E-value=4.7e-08 Score=85.02 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=37.1
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
.+|+||||||||++||..|++.| ++|+|||+.+.+||.+.
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G--~~V~v~Ek~~~~GG~~~ 42 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSRGSGGRMS 42 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCccc
Confidence 58999999999999999999997 99999999999988653
No 106
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.55 E-value=2.8e-07 Score=91.12 Aligned_cols=39 Identities=38% Similarity=0.523 Sum_probs=35.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
..++|+|||||+||++||..|++.| .+|+|+|+.+.+||
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G--~~V~vlEk~~~~gg 163 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSG--AKVILIEKEPVIGG 163 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCCCC
Confidence 3579999999999999999999997 99999999887654
No 107
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.54 E-value=2.6e-07 Score=90.68 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=32.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
.++|+|||||++|++||..|++.| ++|+|+|+.+.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G--~kV~VlEr~~~ 141 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMG--FNPIIVERGKE 141 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTT--CCCEEECSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CeEEEEEccCc
Confidence 479999999999999999999987 99999999854
No 108
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.50 E-value=9.4e-07 Score=81.48 Aligned_cols=40 Identities=20% Similarity=0.356 Sum_probs=34.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
.++|+|||||++|+++|..|++..++.+|+|+|+.+.+||
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GG 118 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGG 118 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCC
Confidence 4799999999999999999999733499999999877653
No 109
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.50 E-value=3.2e-07 Score=86.69 Aligned_cols=34 Identities=32% Similarity=0.504 Sum_probs=31.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.++|+|||||++|+++|..|++.| .+|+|+|+.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G--~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSG--FKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCC
Confidence 469999999999999999999987 9999999985
No 110
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.47 E-value=3.8e-07 Score=84.88 Aligned_cols=36 Identities=31% Similarity=0.402 Sum_probs=32.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
.++|+||||||||+++|..|++.| ++|+|||+.+.+
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G--~~V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCC
Confidence 478999999999999999999997 999999997654
No 111
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.46 E-value=4.3e-07 Score=84.65 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=33.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..++|+|||||++|+++|..|++.+ .+|+|+|+....
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G--~~V~llE~~~~~ 52 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKEN--KNTALFESGTMG 52 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCC--CcEEEEeCCCCC
Confidence 4579999999999999999999987 999999997543
No 112
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.46 E-value=5e-07 Score=83.17 Aligned_cols=39 Identities=21% Similarity=0.258 Sum_probs=34.8
Q ss_pred CeEEEECCchHHHHHHHHHhh---cCCCCeEEEEcCCCCCcccc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~---~~~~~~v~vie~~~~~gg~~ 60 (334)
++|+|||||++|+++|..|++ .+ .+|+|||+.+.+||.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G--~~V~v~Ek~~~~gg~~ 43 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGP--LYLAVWDKADDSGGRM 43 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CC--EEEEEECSSSSSCGGG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCC--ceEEEEECCCCCccce
Confidence 589999999999999999999 65 9999999998777643
No 113
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.45 E-value=7.8e-07 Score=81.27 Aligned_cols=40 Identities=25% Similarity=0.404 Sum_probs=35.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
.++|+|||||++|+++|..|++.| .+|+|||+.+.+||.+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G--~~V~vlE~~~~~gg~~ 41 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAG--HQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGG
T ss_pred CceEEEECCcHHHHHHHHHHHHCC--CcEEEEECCCCCcccc
Confidence 368999999999999999999997 9999999998776644
No 114
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.42 E-value=1e-06 Score=84.38 Aligned_cols=94 Identities=23% Similarity=0.218 Sum_probs=70.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|++|+.+|..|++.+ .+|+++++.+.+. +. ....++...+.+.+++.|++++.++.+..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 216 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAG--KKVTVIDILDRPL--------GV-YLDKEFTDVLTEEMEANNITIATGETVER 216 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTT--------TT-TCCHHHHHHHHHHHHTTTEEEEESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CeEEEEecCcccc--------cc-cCCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 4689999999999999999999987 8999999987542 11 01245667778888889999998865421
Q ss_pred --------EEecccceeccCeEEEeccCCCCCCC
Q 019876 98 --------SVSLSELRQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 --------~v~~~~~~~~yd~lIlATGs~~p~~~ 123 (334)
.+..++..+++|.||+|+|. .|...
T Consensus 217 i~~~~~v~~v~~~~~~i~~d~vi~a~G~-~p~~~ 249 (447)
T 1nhp_A 217 YEGDGRVQKVVTDKNAYDADLVVVAVGV-RPNTA 249 (447)
T ss_dssp EECSSBCCEEEESSCEEECSEEEECSCE-EESCG
T ss_pred EEccCcEEEEEECCCEEECCEEEECcCC-CCChH
Confidence 13333345689999999998 46543
No 115
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=8.8e-07 Score=82.72 Aligned_cols=90 Identities=19% Similarity=0.132 Sum_probs=70.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc--
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG-- 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~-- 96 (334)
.++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. | ...++...+.+.+++.||++++++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~---~~~~~~~~l~~~l~~~gV~i~~~~~v~~i 209 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAG--YHVKLIHRGAMFL--------G---LDEELSNMIKDMLEETGVKFFLNSELLEA 209 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTT--CEEEEECSSSCCT--------T---CCHHHHHHHHHHHHHTTEEEECSCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCCeec--------c---CCHHHHHHHHHHHHHCCCEEEcCCEEEEE
Confidence 379999999999999999999997 8999999987542 2 234666777888888999999886653
Q ss_pred --eEEecccceeccCeEEEeccCCCCCC
Q 019876 97 --SSVSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 --~~v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
..+.+.+++.++|.||+|+|. .|..
T Consensus 210 ~~~~v~~~~g~i~~D~vi~a~G~-~p~~ 236 (367)
T 1xhc_A 210 NEEGVLTNSGFIEGKVKICAIGI-VPNV 236 (367)
T ss_dssp CSSEEEETTEEEECSCEEEECCE-EECC
T ss_pred EeeEEEECCCEEEcCEEEECcCC-CcCH
Confidence 234444445789999999998 4654
No 116
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.40 E-value=9.7e-07 Score=82.95 Aligned_cols=99 Identities=16% Similarity=0.093 Sum_probs=66.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc----cc-c---------cccc--------------------
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF----GL-V---------RSGV-------------------- 64 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g----g~-~---------~~~~-------------------- 64 (334)
.++|+|||||++|+++|..|++.+ .+|+|||+.+.+. +. + ..++
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G--~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQG--HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred cCCEEEECcCHHHHHHHHHHHhCC--CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 469999999999999999999997 9999999976531 00 0 0000
Q ss_pred ------CCC----------CcchhHHHHHHHHHhhcC-CcEEEeCeEEc--------e--EEecccc-eeccCeEEEecc
Q 019876 65 ------APD----------HPETKIVINQFSRVVQHE-RCSFFGNVTLG--------S--SVSLSEL-RQLYHVVVLAYG 116 (334)
Q Consensus 65 ------~p~----------~~~~~~~~~~~~~~~~~~-~i~~~~~~~v~--------~--~v~~~~~-~~~yd~lIlATG 116 (334)
.+. ......+...+.+.+.+. |++++.++.+. . .+.+.++ .+.+|.||.|+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG 163 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADG 163 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCC
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCC
Confidence 000 011235566667777776 89998886542 1 3444444 468999999999
Q ss_pred CCC
Q 019876 117 AES 119 (334)
Q Consensus 117 s~~ 119 (334)
.++
T Consensus 164 ~~s 166 (399)
T 2x3n_A 164 IAS 166 (399)
T ss_dssp TTC
T ss_pred CCh
Confidence 854
No 117
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.39 E-value=1.7e-06 Score=84.81 Aligned_cols=36 Identities=31% Similarity=0.438 Sum_probs=32.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
...+|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G--~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQG--VRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCC
Confidence 4579999999999999999999997 99999999854
No 118
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.39 E-value=1e-06 Score=81.30 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=32.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
.++|+|||||++|+++|..|++.+ .+|+|+|+.+.
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G--~~V~vlE~~~~ 38 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGG--HEVLVAEAAEG 38 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCC
Confidence 469999999999999999999987 99999999853
No 119
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.38 E-value=1.3e-06 Score=81.66 Aligned_cols=37 Identities=30% Similarity=0.345 Sum_probs=33.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g 57 (334)
.++|+|||||++|+++|..|++.| .+|+|+|+.+.+|
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G--~~V~l~E~~~~~g 40 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYG--LKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCCCC
Confidence 368999999999999999999997 9999999987543
No 120
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.36 E-value=1.3e-06 Score=82.28 Aligned_cols=38 Identities=16% Similarity=0.315 Sum_probs=33.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
.+.++|+|||||++|+++|..|++.| .+|+|||+.+.+
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G--~~V~v~E~~~~~ 58 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSG--IDCDVYEAVKEI 58 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CCEEEEeCCCCC
Confidence 35689999999999999999999997 999999998653
No 121
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.36 E-value=1.2e-06 Score=86.45 Aligned_cols=39 Identities=38% Similarity=0.534 Sum_probs=35.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
...+|+|||+|++|+++|..|++.| .+|+|||+.+.++|
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G--~~V~vlEk~~~~gg 158 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAG--ANVILVDKAPFSGG 158 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCCCC
Confidence 4569999999999999999999997 99999999887654
No 122
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.35 E-value=1.3e-06 Score=85.17 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=31.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.++|+|||||++|+++|..|++.+ ++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G--~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRG--HRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTT--CCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCC--CCEEEEccCC
Confidence 469999999999999999999987 9999999986
No 123
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.35 E-value=1e-06 Score=81.68 Aligned_cols=36 Identities=22% Similarity=0.294 Sum_probs=32.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+|+|||||++|+++|.+|++.+ .+|+|+|+.+.+
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G--~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAG--LNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTT--CCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CeEEEEecCCCC
Confidence 358999999999999999999997 999999997644
No 124
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.34 E-value=2.3e-06 Score=86.35 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=33.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..++|+|||||++|+++|..|++.| .+|+|+|+.+.+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G--~~V~vlEk~~~~ 307 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRG--WQVTLYCADEAP 307 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCcc
Confidence 3479999999999999999999997 999999996544
No 125
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.34 E-value=3.1e-06 Score=77.56 Aligned_cols=39 Identities=31% Similarity=0.415 Sum_probs=34.5
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
.+|+|||+|++|+++|..|++.+++.+|+|+|+.+.+||
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~gg 104 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccc
Confidence 389999999999999999999844499999999888764
No 126
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.33 E-value=1.7e-06 Score=85.85 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||||++|+++|..|++.+ .+|+|+|+.+.
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G--~~V~LiEr~~~ 57 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLG--HDVTIYERSAF 57 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCC--CCEEEEcCCCC
Confidence 3479999999999999999999997 99999999854
No 127
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.33 E-value=9.8e-07 Score=82.60 Aligned_cols=99 Identities=19% Similarity=0.161 Sum_probs=65.9
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC---cccccc-----------ccC-C------------------
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP---FGLVRS-----------GVA-P------------------ 66 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~---gg~~~~-----------~~~-p------------------ 66 (334)
++|+|||||++|+++|..|++..|+.+|+|+|+.+.+ |..+.. ++. .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 5899999999999999999998444999999998654 211000 000 0
Q ss_pred --------CC----cchhHHHHHHHHHhhcCCcEEEeCeEEceEEecccceeccCeEEEeccCCCC
Q 019876 67 --------DH----PETKIVINQFSRVVQHERCSFFGNVTLGSSVSLSELRQLYHVVVLAYGAESD 120 (334)
Q Consensus 67 --------~~----~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~v~~~~~~~~yd~lIlATGs~~p 120 (334)
+. ....++...+.+.+.+.|++++.++.+.. +.. .....+|.||.|+|.++.
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~-i~~-~~~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLE-HGE-LPLADYDLVVLANGVNHK 144 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCS-GGG-CCGGGCSEEEECCGGGGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEecc-chh-cccccCCEEEECCCCCch
Confidence 00 11235666667777777899988877632 111 112579999999998544
No 128
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.32 E-value=1.5e-06 Score=86.23 Aligned_cols=108 Identities=17% Similarity=0.131 Sum_probs=67.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC-CCcccc-c-----------------c-c----------c---
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP-TPFGLV-R-----------------S-G----------V--- 64 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~-~~gg~~-~-----------------~-~----------~--- 64 (334)
..++|+|||||+||++||..+++.| .+|+|+|+.+ .+|... . . + +
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G--~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMG--AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 3579999999999999999999997 9999999874 222100 0 0 0 0
Q ss_pred ------CCCC------cchhHHHHHHHHHhhc-CCcEEEeCeEEce--------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 65 ------APDH------PETKIVINQFSRVVQH-ERCSFFGNVTLGS--------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 65 ------~p~~------~~~~~~~~~~~~~~~~-~~i~~~~~~~v~~--------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
-|.. .....+...+.+.+++ .+++++....... .|.+.++ .+.+|.||+|||.+ +..
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~-s~~ 182 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF-LNG 182 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC-BTC
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC-ccC
Confidence 0000 0112355566666766 5888864433211 1223333 46899999999995 555
Q ss_pred CCCCCc
Q 019876 123 LGIPGE 128 (334)
Q Consensus 123 ~~ipG~ 128 (334)
+.++|.
T Consensus 183 ~~~~G~ 188 (637)
T 2zxi_A 183 VIYIGD 188 (637)
T ss_dssp EEEETT
T ss_pred ceeccc
Confidence 556664
No 129
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.32 E-value=2.3e-06 Score=82.22 Aligned_cols=93 Identities=17% Similarity=0.167 Sum_probs=69.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|++|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.||+++.++.+..
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLG--AQVSVVEARERIL--------PT--YDSELTAPVAESLKKLGIALHLGHSVEG 237 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEETTCEEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 4579999999999999999999997 8999999987642 21 1245666777778888999998876531
Q ss_pred ----EEecc--cc---eeccCeEEEeccCCCCCCC
Q 019876 98 ----SVSLS--EL---RQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 ----~v~~~--~~---~~~yd~lIlATGs~~p~~~ 123 (334)
.+.+. ++ .+++|.||+|+|. .|+..
T Consensus 238 i~~~~v~v~~~~G~~~~i~~D~vv~a~G~-~p~~~ 271 (458)
T 1lvl_A 238 YENGCLLANDGKGGQLRLEADRVLVAVGR-RPRTK 271 (458)
T ss_dssp EETTEEEEECSSSCCCEECCSCEEECCCE-EECCS
T ss_pred EEeCCEEEEECCCceEEEECCEEEECcCC-CcCCC
Confidence 12222 33 4689999999998 46654
No 130
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.31 E-value=2.2e-06 Score=80.56 Aligned_cols=36 Identities=31% Similarity=0.422 Sum_probs=33.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||||++|+++|..|++.| ++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAG--VDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCC--CCEEEEecCCC
Confidence 4579999999999999999999997 99999999765
No 131
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.31 E-value=1.8e-06 Score=85.28 Aligned_cols=99 Identities=18% Similarity=0.196 Sum_probs=65.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc-------------------ccc------------c-c-cc-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF-------------------GLV------------R-S-GV- 64 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g-------------------g~~------------~-~-~~- 64 (334)
.++|+|||||++|+++|..|++.| ++|+|||+.+.+. |++ . + +.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G--~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 126 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGG--VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIF 126 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTT--CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcc
Confidence 468999999999999999999997 9999999875432 110 0 1 00
Q ss_pred ------------CCC--CcchhHHHHHHHHHhhcCCcEEEeCeEEc--------eEEec--ccc--eeccCeEEEeccCC
Q 019876 65 ------------APD--HPETKIVINQFSRVVQHERCSFFGNVTLG--------SSVSL--SEL--RQLYHVVVLAYGAE 118 (334)
Q Consensus 65 ------------~p~--~~~~~~~~~~~~~~~~~~~i~~~~~~~v~--------~~v~~--~~~--~~~yd~lIlATGs~ 118 (334)
.|. ......+...+.+.+.+.|++++.++.+. ..+++ .++ .+.+|+||.|+|.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 000 00122455556666666789988887652 13333 344 46899999999985
Q ss_pred C
Q 019876 119 S 119 (334)
Q Consensus 119 ~ 119 (334)
+
T Consensus 207 S 207 (570)
T 3fmw_A 207 S 207 (570)
T ss_dssp C
T ss_pred c
Confidence 4
No 132
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.31 E-value=1.8e-06 Score=84.66 Aligned_cols=95 Identities=16% Similarity=0.165 Sum_probs=71.4
Q ss_pred cCCCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCe
Q 019876 14 ALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNV 93 (334)
Q Consensus 14 ~~~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~ 93 (334)
....-+++++|||||+.|+..|..+.+.| .+|+|+++... .|.+ ..++...+...+++.|++++++.
T Consensus 218 ~l~~lP~~lvIIGgG~IGlE~A~~~~~lG--~~VTii~~~~~---------L~~~--D~ei~~~l~~~l~~~gi~~~~~~ 284 (542)
T 4b1b_A 218 SLKKDPGKTLVVGASYVALECSGFLNSLG--YDVTVAVRSIV---------LRGF--DQQCAVKVKLYMEEQGVMFKNGI 284 (542)
T ss_dssp TCSSCCCSEEEECCSHHHHHHHHHHHHHT--CCEEEEESSCS---------STTS--CHHHHHHHHHHHHHTTCEEEETC
T ss_pred ccccCCceEEEECCCHHHHHHHHHHHhcC--CeEEEeccccc---------cccc--chhHHHHHHHHHHhhcceeecce
Confidence 33445789999999999999999999998 99999987532 1433 35677788888999999999887
Q ss_pred EEce--------EEeccc-ceeccCeEEEeccCCCCCC
Q 019876 94 TLGS--------SVSLSE-LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 94 ~v~~--------~v~~~~-~~~~yd~lIlATGs~~p~~ 122 (334)
.+.. .+...+ ....+|.|++|+|- .|+.
T Consensus 285 ~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR-~Pnt 321 (542)
T 4b1b_A 285 LPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR-KGDI 321 (542)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEESEEEECSCE-EESC
T ss_pred EEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc-cCCc
Confidence 6532 222322 23579999999998 4664
No 133
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.31 E-value=2.8e-06 Score=80.41 Aligned_cols=93 Identities=17% Similarity=0.217 Sum_probs=70.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. |. ....++...+.+.+++.||+++.++.+..
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 212 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAG--VHVSLVETQPRLM--------SR-AAPATLADFVARYHAAQGVDLRFERSVTG 212 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TT-TSCHHHHHHHHHHHHHTTCEEEESCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CEEEEEEeCCccc--------cc-ccCHHHHHHHHHHHHHcCcEEEeCCEEEE
Confidence 4689999999999999999999997 8999999987542 21 01245666777788889999998866532
Q ss_pred ----EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 ----SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ----~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+++|.||+|+|. .|..
T Consensus 213 i~~~~v~~~~g~~i~~D~vi~a~G~-~p~~ 241 (408)
T 2gqw_A 213 SVDGVVLLDDGTRIAADMVVVGIGV-LAND 241 (408)
T ss_dssp EETTEEEETTSCEEECSEEEECSCE-EECC
T ss_pred EECCEEEECCCCEEEcCEEEECcCC-CccH
Confidence 3444444 4689999999998 4653
No 134
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.31 E-value=2.7e-06 Score=79.17 Aligned_cols=35 Identities=23% Similarity=0.347 Sum_probs=32.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
.++|+|||||++|+++|..|++.+ .+|+|+|+...
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G--~~V~lle~~~~ 39 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRG--EEVTVIEKRFI 39 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSST
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCC
Confidence 579999999999999999999987 89999999743
No 135
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.30 E-value=3e-06 Score=81.54 Aligned_cols=93 Identities=20% Similarity=0.280 Sum_probs=70.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
.+++++|||+|++|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.||+++.++.+..
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 235 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLG--AEVTLIEYMPEIL--------PQ--GDPETAALLRRALEKEGIRVRTKTKAVG 235 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHhcCCEEEcCCEEEE
Confidence 3579999999999999999999987 9999999987542 22 1345666777888888999998876521
Q ss_pred --------EEecc-c--c---eeccCeEEEeccCCCCCCC
Q 019876 98 --------SVSLS-E--L---RQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 --------~v~~~-~--~---~~~yd~lIlATGs~~p~~~ 123 (334)
.+.+. + + .+++|.||+|+|. .|...
T Consensus 236 i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~-~p~~~ 274 (464)
T 2eq6_A 236 YEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR-KPRTE 274 (464)
T ss_dssp EEEETTEEEEEEEETTCCSCEEEEESEEEECSCE-EESCT
T ss_pred EEEeCCEEEEEEeecCCCceeEEEcCEEEECCCc-ccCCC
Confidence 23332 3 3 4689999999998 46553
No 136
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.30 E-value=2.2e-06 Score=82.24 Aligned_cols=93 Identities=20% Similarity=0.180 Sum_probs=69.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|++|+.+|..|++.+ .+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 166 ~~~~vvIiGgG~~g~e~A~~l~~~g--~~V~lv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~V~~ 233 (455)
T 2yqu_A 166 VPKRLIVVGGGVIGLELGVVWHRLG--AEVIVLEYMDRIL--------PT--MDLEVSRAAERVFKKQGLTIRTGVRVTA 233 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CEEEEEecCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEECCEEEE
Confidence 3579999999999999999999987 8999999986532 32 1245666677778888999998865521
Q ss_pred --------EEecccc-eeccCeEEEeccCCCCCCC
Q 019876 98 --------SVSLSEL-RQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 --------~v~~~~~-~~~yd~lIlATGs~~p~~~ 123 (334)
.+.+.++ .+++|.||+|+|. .|...
T Consensus 234 i~~~~~~v~v~~~~g~~i~~D~vv~A~G~-~p~~~ 267 (455)
T 2yqu_A 234 VVPEAKGARVELEGGEVLEADRVLVAVGR-RPYTE 267 (455)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECSCE-EECCT
T ss_pred EEEeCCEEEEEECCCeEEEcCEEEECcCC-CcCCC
Confidence 1222233 4689999999998 46553
No 137
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.29 E-value=3.3e-06 Score=79.08 Aligned_cols=92 Identities=21% Similarity=0.177 Sum_probs=69.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 97 (334)
.++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +.. ...++...+.+.+++.|++++.++.+..
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~~-~~~~~~~~l~~~l~~~gv~i~~~~~v~~i 213 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGG--YQLDVVAPCEQVM--------PGL-LHPAAAKAVQAGLEGLGVRFHLGPVLASL 213 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TTT-SCHHHHHHHHHHHHTTTCEEEESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--CeEEEEecCcchh--------hcc-cCHHHHHHHHHHHHHcCCEEEeCCEEEEE
Confidence 689999999999999999999997 8999999876532 211 1245667777888889999998865421
Q ss_pred -------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 -------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 -------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+++|.||+|+|. .|..
T Consensus 214 ~~~~~~~~v~~~~g~~i~~d~vv~a~G~-~p~~ 245 (384)
T 2v3a_A 214 KKAGEGLEAHLSDGEVIPCDLVVSAVGL-RPRT 245 (384)
T ss_dssp EEETTEEEEEETTSCEEEESEEEECSCE-EECC
T ss_pred EecCCEEEEEECCCCEEECCEEEECcCC-CcCH
Confidence 2333344 3689999999998 4554
No 138
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.29 E-value=3.7e-06 Score=81.79 Aligned_cols=102 Identities=20% Similarity=0.198 Sum_probs=67.3
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc-----c---------ccccC----------------
Q 019876 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL-----V---------RSGVA---------------- 65 (334)
Q Consensus 16 ~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~-----~---------~~~~~---------------- 65 (334)
.+..++|+||||||+|+++|..|++.| ++|+|||+.+.++.. + ..|+.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G--~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAG--VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGG 85 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETT
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccc
Confidence 345689999999999999999999997 999999997653210 0 00110
Q ss_pred --------C-CCc-----chhHHHHHHHHHhhcCCcEEEeCeEEce--------EEecccc----eeccCeEEEeccCCC
Q 019876 66 --------P-DHP-----ETKIVINQFSRVVQHERCSFFGNVTLGS--------SVSLSEL----RQLYHVVVLAYGAES 119 (334)
Q Consensus 66 --------p-~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~v~~--------~v~~~~~----~~~yd~lIlATGs~~ 119 (334)
+ .++ ....+...+.+.+.+.+++++.++.+.. .+++.+. ++.+|+||.|.|.++
T Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 86 LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred eecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 0 000 0123445566666677899988876531 2333333 468999999999864
No 139
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.28 E-value=2e-06 Score=80.59 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=31.5
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
++|+|||||++|+++|..|++.| .+|+|+|+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAG--IDNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHT--CCEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCC
Confidence 58999999999999999999997 99999998763
No 140
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.28 E-value=3.7e-06 Score=85.01 Aligned_cols=37 Identities=19% Similarity=0.163 Sum_probs=33.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..++|+|||||.+|+++|..|++.| .+|+|+|+.+.+
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G--~~V~vlEk~~~~ 299 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRG--AVVTLYCADAQP 299 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTT--CCEEEEESSSST
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC--CcEEEEeCCCcc
Confidence 3479999999999999999999997 999999997544
No 141
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.28 E-value=3.7e-06 Score=81.49 Aligned_cols=94 Identities=19% Similarity=0.180 Sum_probs=70.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
...++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. |. ....++...+.+.+++.||+++++..+.
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~ 260 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKG--KEVVLIDVVDTCL--------AG-YYDRDLTDLMAKNMEEHGIQLAFGETVK 260 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHTTTCEEEETCCEE
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCC--CeEEEEEcccchh--------hh-HHHHHHHHHHHHHHHhCCeEEEeCCEEE
Confidence 35689999999999999999999987 8999999986532 21 1134566777888888999999886553
Q ss_pred e--------EEecccceeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
. .+..+...+++|.||+|+|. .|..
T Consensus 261 ~i~~~~~v~~v~~~g~~i~~D~Vi~a~G~-~p~~ 293 (490)
T 2bc0_A 261 EVAGNGKVEKIITDKNEYDVDMVILAVGF-RPNT 293 (490)
T ss_dssp EEECSSSCCEEEESSCEEECSEEEECCCE-EECC
T ss_pred EEEcCCcEEEEEECCcEEECCEEEECCCC-CcCh
Confidence 1 13333334689999999998 4654
No 142
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.27 E-value=4.6e-06 Score=78.43 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=32.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||||++|+++|..|++.| .+|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNG--IDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT--CEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCC
Confidence 3579999999999999999999987 99999999764
No 143
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.26 E-value=2.2e-06 Score=79.45 Aligned_cols=37 Identities=30% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g 57 (334)
..++|+|||||++|+++|.+|+ ++ .+|+|+|+.+.+|
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G--~~V~vlE~~~~~g 44 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AH--GRVVVLEREAQPG 44 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TT--SCEEEECSSSSTT
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CC--CCEEEEECCCCcc
Confidence 3579999999999999999999 46 9999999986543
No 144
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.26 E-value=5.4e-07 Score=87.25 Aligned_cols=41 Identities=22% Similarity=0.224 Sum_probs=32.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
+++|||||||++||+||.+|++.| .+|+|+|+++.+||...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G--~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAG--IPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTT--CCEEEECCC-------C
T ss_pred CCCEEEECCcHHHHHHHHHHHHCC--CcEEEEccCCCCCCcEE
Confidence 579999999999999999999997 99999999999998753
No 145
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.25 E-value=1.3e-06 Score=82.23 Aligned_cols=88 Identities=13% Similarity=0.060 Sum_probs=68.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEceE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGSS 98 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~ 98 (334)
.++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. ....++...+.+.+++.|++++.+..+..-
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g--~~Vtvv~~~~~~l--------~~-~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i 214 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSG--TPASIGIILEYPL--------ER-QLDRDGGLFLKDKLDRLGIKIYTNSNFEEM 214 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHT--CCEEEECSSSSSC--------TT-TSCHHHHHHHHHHHHTTTCEEECSCCGGGC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--CeEEEEEcCCccc--------hh-hcCHHHHHHHHHHHHhCCCEEEeCCEEEEc
Confidence 479999999999999999999997 9999999987642 21 112456677778888899999988766422
Q ss_pred EecccceeccCeEEEeccCCCCCC
Q 019876 99 VSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 99 v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
...+++|.||+|+|. .|..
T Consensus 215 ----g~~~~~D~vv~a~G~-~p~~ 233 (385)
T 3klj_A 215 ----GDLIRSSCVITAVGV-KPNL 233 (385)
T ss_dssp ----HHHHHHSEEEECCCE-EECC
T ss_pred ----CeEEecCeEEECcCc-ccCh
Confidence 334689999999998 4654
No 146
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.24 E-value=3.6e-06 Score=80.99 Aligned_cols=92 Identities=12% Similarity=0.182 Sum_probs=69.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
..++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. +.+ ..++...+.+.+++.|++++.++.+.
T Consensus 165 ~~~~vvVvGgG~~g~e~A~~l~~~G--~~Vtlv~~~~~~l--------~~~--~~~~~~~l~~~l~~~gv~i~~~~~v~~ 232 (463)
T 2r9z_A 165 QPKRVAIIGAGYIGIELAGLLRSFG--SEVTVVALEDRLL--------FQF--DPLLSATLAENMHAQGIETHLEFAVAA 232 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TTS--CHHHHHHHHHHHHHTTCEEESSCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEEcCCccc--------ccc--CHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 3579999999999999999999997 9999999886532 221 23556667777888899999886542
Q ss_pred -------eEEecccce--eccCeEEEeccCCCCCC
Q 019876 97 -------SSVSLSELR--QLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 -------~~v~~~~~~--~~yd~lIlATGs~~p~~ 122 (334)
..+.+.+++ +++|.||+|+|. .|+.
T Consensus 233 i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~-~p~~ 266 (463)
T 2r9z_A 233 LERDAQGTTLVAQDGTRLEGFDSVIWAVGR-APNT 266 (463)
T ss_dssp EEEETTEEEEEETTCCEEEEESEEEECSCE-EESC
T ss_pred EEEeCCeEEEEEeCCcEEEEcCEEEECCCC-CcCC
Confidence 134444554 689999999998 4654
No 147
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.23 E-value=2.6e-06 Score=81.42 Aligned_cols=91 Identities=12% Similarity=0.140 Sum_probs=70.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc--
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG-- 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~-- 96 (334)
.++++|||+|+.|+.+|..+++.+ .+|+|+++.+.+. |.+ ..++...+.+.+++.||+++.+..+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~ll--------~~~--d~~~~~~~~~~l~~~gV~i~~~~~v~~~ 214 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERG--LHPTLIHRSDKIN--------KLM--DADMNQPILDELDKREIPYRLNEEINAI 214 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSCCS--------TTS--CGGGGHHHHHHHHHTTCCEEESCCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcC--Ccceeeeeecccc--------ccc--cchhHHHHHHHhhccceEEEeccEEEEe
Confidence 579999999999999999999997 9999999887542 221 23455567777888899999987763
Q ss_pred --eEEecccce-eccCeEEEeccCCCCCC
Q 019876 97 --SSVSLSELR-QLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 --~~v~~~~~~-~~yd~lIlATGs~~p~~ 122 (334)
..+.+++++ +++|.|++|+|. .|+.
T Consensus 215 ~~~~v~~~~g~~~~~D~vl~a~G~-~Pn~ 242 (437)
T 4eqs_A 215 NGNEITFKSGKVEHYDMIIEGVGT-HPNS 242 (437)
T ss_dssp ETTEEEETTSCEEECSEEEECCCE-EESC
T ss_pred cCCeeeecCCeEEeeeeEEEEece-ecCc
Confidence 234555544 589999999998 4654
No 148
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.23 E-value=8.7e-06 Score=77.97 Aligned_cols=94 Identities=18% Similarity=0.256 Sum_probs=71.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..+.+.+ .+|+++++.+.+. |.. ...++...+.+.+++.|++++.++.+..
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~~-~d~~~~~~l~~~l~~~GV~i~~~~~v~~ 214 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMK--KTVHVFESLENLL--------PKY-FDKEMVAEVQKSLEKQAVIFHFEETVLG 214 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TTT-CCHHHHHHHHHHHHTTTEEEEETCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEEccCccc--------ccc-CCHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 3579999999999999999999997 9999999887532 211 1346677788888899999998865521
Q ss_pred --------EEecccceeccCeEEEeccCCCCCCC
Q 019876 98 --------SVSLSELRQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 --------~v~~~~~~~~yd~lIlATGs~~p~~~ 123 (334)
.+..+++.+++|.||+|+|. .|...
T Consensus 215 i~~~~~~v~v~~~~g~i~aD~Vv~A~G~-~p~~~ 247 (452)
T 3oc4_A 215 IEETANGIVLETSEQEISCDSGIFALNL-HPQLA 247 (452)
T ss_dssp EEECSSCEEEEESSCEEEESEEEECSCC-BCCCS
T ss_pred EEccCCeEEEEECCCEEEeCEEEECcCC-CCChH
Confidence 13344456789999999998 46543
No 149
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.22 E-value=4e-06 Score=80.66 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=70.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. | ...++...+.+.+++.|++++.++.+..
T Consensus 175 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~---~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 241 (467)
T 1zk7_A 175 IPERLAVIGSSVVALELAQAFARLG--SKVTVLARNTLFF--------R---EDPAIGEAVTAAFRAEGIEVLEHTQASQ 241 (467)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTT--------T---SCHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEEECCccC--------C---CCHHHHHHHHHHHHhCCCEEEcCCEEEE
Confidence 4689999999999999999999997 8999999876531 3 1345677778888889999998865421
Q ss_pred --------EEecccceeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+++..+++|.||+|+|. .|..
T Consensus 242 i~~~~~~~~v~~~~~~i~aD~Vv~a~G~-~p~~ 273 (467)
T 1zk7_A 242 VAHMDGEFVLTTTHGELRADKLLVATGR-TPNT 273 (467)
T ss_dssp EEEETTEEEEEETTEEEEESEEEECSCE-EESC
T ss_pred EEEeCCEEEEEECCcEEEcCEEEECCCC-CcCC
Confidence 13334445689999999998 4654
No 150
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.22 E-value=2.6e-06 Score=80.39 Aligned_cols=37 Identities=14% Similarity=0.150 Sum_probs=32.3
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
.++|+|||||++|+++|..|++..|+.+|+|+|+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 4689999999999999999999933399999999754
No 151
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.22 E-value=5.3e-06 Score=80.62 Aligned_cols=100 Identities=21% Similarity=0.244 Sum_probs=67.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc--------------cccc-------------------
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV--------------RSGV------------------- 64 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~--------------~~~~------------------- 64 (334)
..++|+||||||+|+++|..|++.| ++|+|||+.+.+.... ..|+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G--~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGG--VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 5679999999999999999999997 9999999975432100 0000
Q ss_pred -----CC-CCc-----chhHHHHHHHHHhhcCCcEEEeCeEEc--------eEEecccc----eeccCeEEEeccCCC
Q 019876 65 -----AP-DHP-----ETKIVINQFSRVVQHERCSFFGNVTLG--------SSVSLSEL----RQLYHVVVLAYGAES 119 (334)
Q Consensus 65 -----~p-~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~v~--------~~v~~~~~----~~~yd~lIlATGs~~ 119 (334)
.+ .++ ....+...+.+.+.+.+++++.++.+. ..+++.+. ++.+|+||.|.|.++
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 00 010 112455556666667789998887652 12333333 468999999999864
No 152
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.21 E-value=6.5e-06 Score=81.37 Aligned_cols=39 Identities=33% Similarity=0.484 Sum_probs=34.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGL 59 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~ 59 (334)
.++|+|||+|++|+++|..|.+.+ .+|+|+|+.+.++|.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g--~~v~~~e~~~~~~~~ 164 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAG--AKVILLEKEPIPGGN 164 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSS--CCEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCC--CcEEEEecCCCCCcc
Confidence 568999999999999999999987 999999998876653
No 153
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.20 E-value=4.4e-06 Score=78.28 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=33.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhh-cCCCCeEEEEcCCCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPTP 56 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~-~~~~~~v~vie~~~~~ 56 (334)
+..++|+|||||++|+++|.+|++ .+ ..+|+|+|+.+..
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G-~~~V~vlE~~~~~ 58 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHG-ITNVAVLEKGWLA 58 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHC-CCCEEEECSSSTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcC-CCcEEEEeCCCCC
Confidence 345799999999999999999999 74 2799999998643
No 154
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.20 E-value=4.2e-06 Score=77.99 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=33.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g 57 (334)
.++|+|||||++|+++|..|++.+ .+|+|+|+.+..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G--~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQG--VKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCCCCC
Confidence 469999999999999999999997 9999999976543
No 155
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.20 E-value=2.9e-06 Score=81.35 Aligned_cols=99 Identities=19% Similarity=0.166 Sum_probs=65.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC--cccc-----------cccc------------------CCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP--FGLV-----------RSGV------------------APD 67 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~--gg~~-----------~~~~------------------~p~ 67 (334)
.++|+|||||++|+++|..|++.| .+|+|+|+.+.+ |... ..++ .|.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G--~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 83 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRG--LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPD 83 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSS--CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCC
Confidence 369999999999999999999987 999999997643 1110 0000 000
Q ss_pred C------------cchhHHHHHHHHHhhcCCcEEEeCeEEce------E---Eecc---cc---eeccCeEEEeccCCC
Q 019876 68 H------------PETKIVINQFSRVVQHERCSFFGNVTLGS------S---VSLS---EL---RQLYHVVVLAYGAES 119 (334)
Q Consensus 68 ~------------~~~~~~~~~~~~~~~~~~i~~~~~~~v~~------~---v~~~---~~---~~~yd~lIlATGs~~ 119 (334)
. .....+...+.+.+.+.|++++.++.+.. . +.+. ++ .+.+|.||.|+|.++
T Consensus 84 ~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 84 MQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp SSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 0 01124555566666667899988876521 1 2232 33 458999999999853
No 156
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.20 E-value=3.4e-06 Score=83.82 Aligned_cols=35 Identities=26% Similarity=0.221 Sum_probs=32.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|+|||||+||++||..|++.| .+|+|+|+.+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G--~kVlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGG--LHCLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHHCC--CcEEEEEecc
Confidence 4579999999999999999999997 9999999874
No 157
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=6.4e-06 Score=78.94 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=69.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 236 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFG--TKVTILEGAGEIL--------SG--FEKQMAAIIKKRLKKKGVEVVTNALAKG 236 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTCEEEESEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4589999999999999999999987 8999999986542 32 1345666777788888999998876521
Q ss_pred --------EEecc---c-ceeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS---E-LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~---~-~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. + ..+++|.||+|+|. .|..
T Consensus 237 i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~-~p~~ 272 (455)
T 1ebd_A 237 AEEREDGVTVTYEANGETKTIDADYVLVTVGR-RPNT 272 (455)
T ss_dssp EEEETTEEEEEEEETTEEEEEEESEEEECSCE-EESC
T ss_pred EEEeCCeEEEEEEeCCceeEEEcCEEEECcCC-Cccc
Confidence 12222 2 23589999999998 4654
No 158
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.19 E-value=7.8e-06 Score=81.03 Aligned_cols=38 Identities=24% Similarity=0.433 Sum_probs=33.0
Q ss_pred CeEEEECCchHHHHHHHHHhhc----CCCCeEEEEcCCCCCc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKA----HQEAQVDIIDRLPTPF 57 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~----~~~~~v~vie~~~~~g 57 (334)
++|+|||||+||+++|..|++. +++.+|+|||+.+.++
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 6899999999999999999998 2239999999986654
No 159
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.18 E-value=8.3e-06 Score=77.16 Aligned_cols=92 Identities=13% Similarity=0.188 Sum_probs=70.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 97 (334)
.++++|||+|+.|+.+|..+.+.+ .+|+++++.+.+. +. ....++...+.+.+++.|+++++++.+..
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g--~~Vtvv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFG--VNVTLLEALPRVL--------AR-VAGEALSEFYQAEHRAHGVDLRTGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEEETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcC--CeEEEEecCCchh--------hh-hcCHHHHHHHHHHHHhCCCEEEECCEEEEE
Confidence 679999999999999999999997 9999999987542 11 11245667778888889999998865521
Q ss_pred --------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+++|.||+|+|. .|..
T Consensus 221 ~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~-~p~~ 253 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGSVIPADIVIVGIGI-VPCV 253 (415)
T ss_dssp EESSSBEEEEEESSSCEEECSEEEECSCC-EESC
T ss_pred EecCCcEEEEEeCCCCEEEcCEEEECCCC-ccCh
Confidence 2444444 3689999999998 4654
No 160
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.17 E-value=9.7e-07 Score=85.52 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=37.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
...+|+|||||++||+||..|++.. +.+|+|+|+++.+||.+.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~-G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQID-GPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHC-CSCEEEEESSSSCCGGGC
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhC-CCCEEEEECCCCCcCCee
Confidence 4579999999999999999998752 399999999999999764
No 161
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.17 E-value=3.9e-06 Score=79.40 Aligned_cols=93 Identities=14% Similarity=0.065 Sum_probs=70.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+... ....++...+.+.+++.||+++++..+..
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtvv~~~~~~l~~---------~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 210 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLG--LSVTILEAGDELLVR---------VLGRRIGAWLRGLLTELGVQVELGTGVVG 210 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSSHH---------HHCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCccchh---------hcCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4689999999999999999999987 999999988654211 01235666777788888999998866531
Q ss_pred --------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+++|.||+|+|. .|..
T Consensus 211 i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~-~p~~ 243 (410)
T 3ef6_A 211 FSGEGQLEQVMASDGRSFVADSALICVGA-EPAD 243 (410)
T ss_dssp EECSSSCCEEEETTSCEEECSEEEECSCE-EECC
T ss_pred EeccCcEEEEEECCCCEEEcCEEEEeeCC-eecH
Confidence 2444444 3589999999998 4654
No 162
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.17 E-value=5.4e-06 Score=80.10 Aligned_cols=92 Identities=14% Similarity=0.151 Sum_probs=69.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|++|+.+|..|++.+ .+|+++++.+.+. +. ...++...+.+.+++.|++++.++.+..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELG--KKVRMIERNDHIG--------TI--YDGDMAEYIYKEADKHHIEILTNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTT--CEEEEECCGGGTT--------SS--SCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CeEEEEEeCCchh--------hc--CCHHHHHHHHHHHHHcCcEEEcCCEEEE
Confidence 4689999999999999999999987 8999999876532 21 1245667777788888999998765421
Q ss_pred --------EEecccceeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
.+..++..+++|.||+|+|. .|..
T Consensus 253 i~~~~~v~~v~~~~~~i~~D~vi~a~G~-~p~~ 284 (480)
T 3cgb_A 253 FKGNERVEAVETDKGTYKADLVLVSVGV-KPNT 284 (480)
T ss_dssp EEESSBEEEEEETTEEEECSEEEECSCE-EESC
T ss_pred EEcCCcEEEEEECCCEEEcCEEEECcCC-CcCh
Confidence 12333445689999999998 4554
No 163
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.16 E-value=7.7e-06 Score=78.86 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=69.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
.+++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. |. ...++...+.+.+++.||+++.++.+..
T Consensus 182 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 249 (478)
T 1v59_A 182 IPKRLTIIGGGIIGLEMGSVYSRLG--SKVTVVEFQPQIG--------AS--MDGEVAKATQKFLKKQGLDFKLSTKVIS 249 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------SS--SCHHHHHHHHHHHHHTTCEEECSEEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcC--CEEEEEEeCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 3589999999999999999999997 8999999987642 21 1245667777888889999998866521
Q ss_pred ----------EEecc-----c-ceeccCeEEEeccCCCCCC
Q 019876 98 ----------SVSLS-----E-LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ----------~v~~~-----~-~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. + ..+++|.||+|+|. .|..
T Consensus 250 i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~-~p~~ 289 (478)
T 1v59_A 250 AKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGR-RPYI 289 (478)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCE-EECC
T ss_pred EEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCC-CcCC
Confidence 12222 2 23589999999998 4654
No 164
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.16 E-value=7.4e-06 Score=77.27 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCe-EEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQ-VDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~-v~vie~~~~~ 56 (334)
.++|+|||||++|+++|..|++.| .+ |+|||+.+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G--~~~v~v~E~~~~~ 40 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAG--IGKVTLLESSSEI 40 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCCCc
Confidence 479999999999999999999997 99 9999997653
No 165
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.16 E-value=6.8e-06 Score=79.39 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=70.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+++.||++++++.+.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~Gv~i~~~~~v~~ 251 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLG--SETHLVIRGETVL--------RK--FDECIQNTITDHYVKEGINVHKLSKIVK 251 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CceEEEEeCCccc--------cc--cCHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 4689999999999999999999997 8999999987542 22 134566677778888899999886542
Q ss_pred ---------eEEecccc--eeccCeEEEeccCCCCCC
Q 019876 97 ---------SSVSLSEL--RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ---------~~v~~~~~--~~~yd~lIlATGs~~p~~ 122 (334)
..+.+.++ .+++|.||+|+|. .|..
T Consensus 252 i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~-~p~~ 287 (479)
T 2hqm_A 252 VEKNVETDKLKIHMNDSKSIDDVDELIWTIGR-KSHL 287 (479)
T ss_dssp EEECC-CCCEEEEETTSCEEEEESEEEECSCE-EECC
T ss_pred EEEcCCCcEEEEEECCCcEEEEcCEEEECCCC-CCcc
Confidence 12444454 4689999999998 4654
No 166
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.15 E-value=5.9e-06 Score=79.84 Aligned_cols=92 Identities=13% Similarity=0.216 Sum_probs=70.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+|+++.+.+. |. ...++...+.+.+++.||++++++.+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~G--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gV~i~~~~~v~~ 251 (482)
T 1ojt_A 184 VPGKLLIIGGGIIGLEMGTVYSTLG--SRLDVVEMMDGLM--------QG--ADRDLVKVWQKQNEYRFDNIMVNTKTVA 251 (482)
T ss_dssp CCSEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHGGGEEEEECSCEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEECCccc--------cc--cCHHHHHHHHHHHHhcCCEEEECCEEEE
Confidence 3689999999999999999999997 8999999987642 32 2345667778888889999998876521
Q ss_pred --------EEeccc----c-eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSE----L-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~----~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.+ + .+.+|.||+|+|. .|+.
T Consensus 252 i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~-~p~~ 288 (482)
T 1ojt_A 252 VEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR-APNG 288 (482)
T ss_dssp EEEETTEEEEEEESSSCCSSCEEESCEEECCCE-EECG
T ss_pred EEEcCCeEEEEEeccCCCceEEEcCEEEECcCC-CcCC
Confidence 233333 3 3579999999998 4654
No 167
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.14 E-value=9e-06 Score=76.65 Aligned_cols=93 Identities=19% Similarity=0.199 Sum_probs=70.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..+.+.+ .+|+++++.+.+. +. ....++...+.+.+++.|+++++++.+..
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtvv~~~~~~~--------~~-~~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 209 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKG--LEVDVVELAPRVM--------AR-VVTPEISSYFHDRHSGAGIRMHYGVRATE 209 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCCCcch--------hh-ccCHHHHHHHHHHHHhCCcEEEECCEEEE
Confidence 3579999999999999999999997 9999999887542 11 11245667777888889999998865421
Q ss_pred ---------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+++|.||+|+|. .|..
T Consensus 210 i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~-~p~~ 243 (404)
T 3fg2_P 210 IAAEGDRVTGVVLSDGNTLPCDLVVVGVGV-IPNV 243 (404)
T ss_dssp EEEETTEEEEEEETTSCEEECSEEEECCCE-EECC
T ss_pred EEecCCcEEEEEeCCCCEEEcCEEEECcCC-ccCH
Confidence 2444444 4689999999998 4654
No 168
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=1.1e-05 Score=78.40 Aligned_cols=91 Identities=18% Similarity=0.170 Sum_probs=69.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc--
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG-- 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~-- 96 (334)
.++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. |. ...++...+.+.+++.||++++++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~gv~i~~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLG--IDSYIFARGNRIL--------RK--FDESVINVLENDMKKNNINIVTFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcC--CeEEEEecCCccC--------cc--cchhhHHHHHHHHHhCCCEEEECCEEEEE
Confidence 679999999999999999999987 8999999877542 22 134566777788888999999886542
Q ss_pred -------eEEecccce--eccCeEEEeccCCCCCC
Q 019876 97 -------SSVSLSELR--QLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 -------~~v~~~~~~--~~yd~lIlATGs~~p~~ 122 (334)
..+.+.+++ +++|.||+|+|. .|..
T Consensus 244 ~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~-~p~~ 277 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGRIYEHFDHVIYCVGR-SPDT 277 (500)
T ss_dssp EESSTTCEEEEETTSCEEEEESEEEECCCB-CCTT
T ss_pred EEcCCceEEEEECCCcEEEECCEEEECCCC-CcCC
Confidence 123344443 689999999998 4654
No 169
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.13 E-value=7.6e-06 Score=78.40 Aligned_cols=92 Identities=18% Similarity=0.257 Sum_probs=69.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+.
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 233 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLG--AKTHLFEMFDAPL--------PS--FDPMISETLVEVMNAEGPQLHTNAIPKA 233 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHSCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcC--CEEEEEEeCCchh--------hh--hhHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4579999999999999999999987 8999999876532 22 123566677778888899999886542
Q ss_pred --------eEEecccc-eeccCeEEEeccCCCCCC
Q 019876 97 --------SSVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 --------~~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
..+.+.++ .+++|.||+|+|. .|..
T Consensus 234 i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~-~p~~ 267 (450)
T 1ges_A 234 VVKNTDGSLTLELEDGRSETVDCLIWAIGR-EPAN 267 (450)
T ss_dssp EEECTTSCEEEEETTSCEEEESEEEECSCE-EESC
T ss_pred EEEeCCcEEEEEECCCcEEEcCEEEECCCC-CcCC
Confidence 12334444 4689999999998 4654
No 170
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.12 E-value=1e-05 Score=77.69 Aligned_cols=92 Identities=17% Similarity=0.260 Sum_probs=69.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+++.||++++++.+..
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 237 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYG--VDVTIVEFLPRAL--------PN--EDADVSKEIEKQFKKLGVTILTATKVES 237 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCEEECSCEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHcCCEEEeCcEEEE
Confidence 4589999999999999999999997 8999999987532 32 2345667777888888999999876521
Q ss_pred --------EEecc-cc---eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS-EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~-~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+++|.||+|+|. .|..
T Consensus 238 i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~-~p~~ 273 (464)
T 2a8x_A 238 IADGGSQVTVTVTKDGVAQELKAEKVLQAIGF-APNV 273 (464)
T ss_dssp EEECSSCEEEEEESSSCEEEEEESEEEECSCE-EECC
T ss_pred EEEcCCeEEEEEEcCCceEEEEcCEEEECCCC-CccC
Confidence 22322 22 4589999999998 4654
No 171
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.12 E-value=1.1e-05 Score=77.32 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=69.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. |. ....++...+.+.+++.|+++++++.+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~ 216 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQN--YNVNLIDGHERVL--------YK-YFDKEFTDILAKDYEAHGVNLVLGSKVAA 216 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHHHTTCEEEESSCEEE
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcC--CEEEEEEcCCchh--------hh-hhhhhHHHHHHHHHHHCCCEEEcCCeeEE
Confidence 3679999999999999999999987 8999999876532 21 11345667778888889999998865421
Q ss_pred ---------EEecccceeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
.+..+..++++|.||+|+|. .|..
T Consensus 217 i~~~~~~v~~v~~~g~~i~~D~vv~a~G~-~p~~ 249 (452)
T 2cdu_A 217 FEEVDDEIITKTLDGKEIKSDIAILCIGF-RPNT 249 (452)
T ss_dssp EEEETTEEEEEETTSCEEEESEEEECCCE-EECC
T ss_pred EEcCCCeEEEEEeCCCEEECCEEEECcCC-CCCH
Confidence 12232334689999999998 4654
No 172
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.11 E-value=1.4e-05 Score=76.92 Aligned_cols=92 Identities=18% Similarity=0.211 Sum_probs=69.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCC-CCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAP-DHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p-~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
.+++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. | . ...++...+.+.+++.|++++.++.+.
T Consensus 177 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~ 244 (474)
T 1zmd_A 177 VPEKMVVIGAGVIGVELGSVWQRLG--ADVTAVEFLGHVG--------GVG--IDMEISKNFQRILQKQGFKFKLNTKVT 244 (474)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------CSS--CCHHHHHHHHHHHHHTTCEEECSEEEE
T ss_pred cCceEEEECCCHHHHHHHHHHHHcC--CEEEEEeccCccC--------Ccc--cCHHHHHHHHHHHHHCCCEEEeCceEE
Confidence 3579999999999999999999997 8999999987532 2 2 134566777788888999999887652
Q ss_pred e---------EEec-----cc-ceeccCeEEEeccCCCCCC
Q 019876 97 S---------SVSL-----SE-LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~---------~v~~-----~~-~~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+ .+ ..+++|.||+|+|. .|..
T Consensus 245 ~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~-~p~~ 284 (474)
T 1zmd_A 245 GATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGR-RPFT 284 (474)
T ss_dssp EEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCE-EECC
T ss_pred EEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCC-CcCC
Confidence 1 2221 12 23589999999998 4654
No 173
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.11 E-value=1.4e-05 Score=78.11 Aligned_cols=90 Identities=11% Similarity=-0.002 Sum_probs=69.7
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc---
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG--- 96 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~--- 96 (334)
++++|||+|+.|+.+|..+.+.+ .+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATG--RRTVMLVRTEPLK--------LI--KDNETRAYVLDRMKEQGMEIISGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCTTT--------TC--CSHHHHHHHHHHHHHTTCEEESSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcC--CeEEEEEecCccc--------cc--ccHHHHHHHHHHHHhCCcEEEECCEEEEEE
Confidence 89999999999999999999987 8999999887532 22 234566777888888999999887652
Q ss_pred ---------eEEecccc--eeccCeEEEeccCCCCCC
Q 019876 97 ---------SSVSLSEL--RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ---------~~v~~~~~--~~~yd~lIlATGs~~p~~ 122 (334)
..+.+.++ .+.+|.||+|+|. .|..
T Consensus 283 ~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~-~p~~ 318 (523)
T 1mo9_A 283 EDANGRVQAVVAMTPNGEMRIETDFVFLGLGE-QPRS 318 (523)
T ss_dssp ECTTSBEEEEEEEETTEEEEEECSCEEECCCC-EECC
T ss_pred EcCCCceEEEEEEECCCcEEEEcCEEEECcCC-ccCC
Confidence 12334444 4689999999998 4654
No 174
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.09 E-value=1.8e-05 Score=76.65 Aligned_cols=93 Identities=20% Similarity=0.238 Sum_probs=70.1
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
...++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ...++...+.+.+++.||+++.++.+.
T Consensus 196 ~~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~gV~v~~~~~v~ 263 (491)
T 3urh_A 196 KVPASMIVVGGGVIGLELGSVWARLG--AKVTVVEFLDTIL--------GG--MDGEVAKQLQRMLTKQGIDFKLGAKVT 263 (491)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------SS--SCHHHHHHHHHHHHHTTCEEECSEEEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcC--CEEEEEecccccc--------cc--CCHHHHHHHHHHHHhCCCEEEECCeEE
Confidence 34689999999999999999999997 8999999887542 22 134566777788888899999887652
Q ss_pred e--------EEeccc------ceeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSE------LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~------~~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.+ ..+++|.||+|+|. .|..
T Consensus 264 ~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~-~p~~ 302 (491)
T 3urh_A 264 GAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR-KPST 302 (491)
T ss_dssp EEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC-EECC
T ss_pred EEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC-ccCC
Confidence 1 133321 24589999999998 4654
No 175
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.08 E-value=1.5e-05 Score=76.53 Aligned_cols=92 Identities=16% Similarity=0.251 Sum_probs=69.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHh-hcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVV-QHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~-~~~~i~~~~~~~v~ 96 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+ ++.|++++.++.+.
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~~gv~i~~~~~v~ 240 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLG--AEVTVVEFAPRCA--------PT--LDEDVTNALVGALAKNEKMKFMTSTKVV 240 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHHTCCEEECSCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHhC--CEEEEEecCCccc--------cc--CCHHHHHHHHHHHhhcCCcEEEeCCEEE
Confidence 4589999999999999999999987 8999999886532 32 2345667777888 88899999887652
Q ss_pred e--------EEecc--cc---eeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLS--EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~--~~---~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+. ++ .+++|.||+|+|. .|..
T Consensus 241 ~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~-~p~~ 278 (468)
T 2qae_A 241 GGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGR-RPFT 278 (468)
T ss_dssp EEEECSSSEEEEEECC---EEEEEESEEEECSCE-EECC
T ss_pred EEEEcCCeEEEEEEcCCCceEEEECCEEEECCCc-ccCC
Confidence 1 22332 33 4689999999998 4654
No 176
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.08 E-value=1.9e-05 Score=76.05 Aligned_cols=92 Identities=11% Similarity=0.110 Sum_probs=69.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. +.+ ..++...+.+.+++.||+++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~~--d~~~~~~~~~~l~~~gv~i~~~~~v~~ 253 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALG--SKTSLMIRHDKVL--------RSF--DSMISTNCTEELENAGVEVLKFSQVKE 253 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TTS--CHHHHHHHHHHHHHTTCEEETTEEEEE
T ss_pred cCccEEEECCCHHHHHHHHHHHHcC--CeEEEEEeCCccc--------ccc--CHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4689999999999999999999997 8999999876532 221 345667777888889999998876521
Q ss_pred ----------EEeccc--------ceeccCeEEEeccCCCCCC
Q 019876 98 ----------SVSLSE--------LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ----------~v~~~~--------~~~~yd~lIlATGs~~p~~ 122 (334)
.+...+ ..+++|.||+|+|. .|..
T Consensus 254 i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~-~p~~ 295 (478)
T 3dk9_A 254 VKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR-VPNT 295 (478)
T ss_dssp EEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE-EESC
T ss_pred EEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc-ccCC
Confidence 133332 24589999999998 4654
No 177
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.08 E-value=1.3e-05 Score=77.81 Aligned_cols=94 Identities=17% Similarity=0.129 Sum_probs=70.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCC-CCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQ-EAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~-~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..++++|||+|+.|+.+|..|.+..+ +.+|+++++.+.+. |. ...++...+.+.+++.||++++++.+.
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~v~ 259 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--------RG--FDETIREEVTKQLTANGIEIMTNENPA 259 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEEESCCEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 45799999999999999999999821 28999999987532 22 134566777788888999999886542
Q ss_pred e---------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 97 S---------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~---------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.++ .+++|.||+|+|. .|..
T Consensus 260 ~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~-~p~~ 294 (495)
T 2wpf_A 260 KVSLNTDGSKHVTFESGKTLDVDVVMMAIGR-IPRT 294 (495)
T ss_dssp EEEECTTSCEEEEETTSCEEEESEEEECSCE-EECC
T ss_pred EEEEcCCceEEEEECCCcEEEcCEEEECCCC-cccc
Confidence 1 2333344 4689999999998 4654
No 178
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.08 E-value=1.2e-05 Score=77.87 Aligned_cols=92 Identities=21% Similarity=0.148 Sum_probs=70.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhc---CCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeE
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKA---HQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~---~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (334)
..++++|||+|+.|+.+|..|.+. + .+|+++++.+.+. |. ...++...+.+.+++.|+++++++.
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~ 253 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARG--GQVDLAYRGDMIL--------RG--FDSELRKQLTEQLRANGINVRTHEN 253 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTT--CEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTEEEEETCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCc--CeEEEEEcCCCcc--------cc--cCHHHHHHHHHHHHhCCCEEEeCCE
Confidence 457999999999999999999998 6 8999999987532 32 1345667777888889999998865
Q ss_pred Ece---------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 95 LGS---------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 95 v~~---------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
+.. .+.+.++ .+++|.||+|+|. .|..
T Consensus 254 v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~-~p~~ 290 (490)
T 1fec_A 254 PAKVTKNADGTRHVVFESGAEADYDVVMLAIGR-VPRS 290 (490)
T ss_dssp EEEEEECTTSCEEEEETTSCEEEESEEEECSCE-EESC
T ss_pred EEEEEEcCCCEEEEEECCCcEEEcCEEEEccCC-CcCc
Confidence 421 2334444 4689999999998 4654
No 179
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.06 E-value=2.2e-05 Score=76.08 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=68.9
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..+++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |.+ ..++...+.+.+++. ++++.++.+.
T Consensus 172 ~~~k~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~~--d~~~~~~l~~~l~~~-V~i~~~~~v~ 238 (492)
T 3ic9_A 172 DLPKSVAVFGPGVIGLELGQALSRLG--VIVKVFGRSGSVA--------NLQ--DEEMKRYAEKTFNEE-FYFDAKARVI 238 (492)
T ss_dssp SCCSEEEEESSCHHHHHHHHHHHHTT--CEEEEECCTTCCT--------TCC--CHHHHHHHHHHHHTT-SEEETTCEEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEECCccc--------ccC--CHHHHHHHHHHHhhC-cEEEECCEEE
Confidence 34689999999999999999999997 8999999987642 221 245666777777776 9999887652
Q ss_pred e--------EEecc--cc---eeccCeEEEeccCCCCCCC
Q 019876 97 S--------SVSLS--EL---RQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 97 ~--------~v~~~--~~---~~~yd~lIlATGs~~p~~~ 123 (334)
. .+... ++ .+++|.||+|+|. .|...
T Consensus 239 ~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~-~p~~~ 277 (492)
T 3ic9_A 239 STIEKEDAVEVIYFDKSGQKTTESFQYVLAATGR-KANVD 277 (492)
T ss_dssp EEEECSSSEEEEEECTTCCEEEEEESEEEECSCC-EESCS
T ss_pred EEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCC-ccCCC
Confidence 1 23332 22 4689999999998 46543
No 180
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.06 E-value=2.4e-05 Score=75.28 Aligned_cols=93 Identities=14% Similarity=0.274 Sum_probs=70.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
...++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+++.||+++.++.+.
T Consensus 178 ~~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~Gv~v~~~~~v~ 245 (476)
T 3lad_A 178 NVPGKLGVIGAGVIGLELGSVWARLG--AEVTVLEAMDKFL--------PA--VDEQVAKEAQKILTKQGLKILLGARVT 245 (476)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSS--------TT--SCHHHHHHHHHHHHHTTEEEEETCEEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEecCCCcC--------cc--cCHHHHHHHHHHHHhCCCEEEECCEEE
Confidence 34679999999999999999999997 8999999987532 32 134566777788888999999887653
Q ss_pred e--------EEeccc----ceeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSE----LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~----~~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.+ ..+++|.||+|+|. .|..
T Consensus 246 ~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~-~p~~ 282 (476)
T 3lad_A 246 GTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGR-RPVT 282 (476)
T ss_dssp EEEECSSCEEEEEESSSEEEEEEESEEEECSCE-EECC
T ss_pred EEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCC-cccC
Confidence 1 123322 24589999999998 4654
No 181
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.06 E-value=1.6e-05 Score=75.70 Aligned_cols=93 Identities=16% Similarity=0.206 Sum_probs=68.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. +.. ...++...+.+.+++.|+++++++.+..
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G--~~Vtlv~~~~~~l--------~~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 216 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKAN--MHVTLLDTAARVL--------ERV-TAPPVSAFYEHLHREAGVDIRTGTQVCG 216 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSTT--------TTT-SCHHHHHHHHHHHHHHTCEEECSCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCC--CEEEEEEeCCccc--------cch-hhHHHHHHHHHHHHhCCeEEEeCCEEEE
Confidence 4689999999999999999999997 8999999876532 110 1235566677777888999998865421
Q ss_pred -----------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 -----------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 -----------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+.+|.||+|+|. .|..
T Consensus 217 i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~-~p~~ 252 (431)
T 1q1r_A 217 FEMSTDQQKVTAVLCEDGTRLPADLVIAGIGL-IPNC 252 (431)
T ss_dssp EEECTTTCCEEEEEETTSCEEECSEEEECCCE-EECC
T ss_pred EEeccCCCcEEEEEeCCCCEEEcCEEEECCCC-CcCc
Confidence 2333333 3589999999998 4543
No 182
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.05 E-value=2.1e-05 Score=76.37 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=70.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..+.+.+ .+|+++++.+.+. |. ...++...+.+.+++.|+++++++.+..
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~d~~~~~~l~~~l~~~GV~i~~~~~V~~ 248 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELG--VPVTVVASQDHVL--------PY--EDADAALVLEESFAERGVRLFKNARAAS 248 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTT--CCEEEECSSSSSS--------CC--SSHHHHHHHHHHHHHTTCEEETTCCEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEcCCccc--------cc--cCHHHHHHHHHHHHHCCCEEEeCCEEEE
Confidence 4579999999999999999999987 8999999887532 32 2345667778888889999998865521
Q ss_pred --------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+...++ .+.+|.||+|+|. .|..
T Consensus 249 i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~-~p~~ 281 (499)
T 1xdi_A 249 VTRTGAGVLVTMTDGRTVEGSHALMTIGS-VPNT 281 (499)
T ss_dssp EEECSSSEEEEETTSCEEEESEEEECCCE-EECC
T ss_pred EEEeCCEEEEEECCCcEEEcCEEEECCCC-CcCC
Confidence 2223333 4689999999998 4654
No 183
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.04 E-value=2e-05 Score=75.72 Aligned_cols=93 Identities=11% Similarity=0.087 Sum_probs=71.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
...++++|||+|+.|+.+|..+.+.+ .+|+++++.+.+. |.+ ..++...+.+.+++.|++++.++.+.
T Consensus 168 ~~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vt~v~~~~~~l--------~~~--~~~~~~~l~~~l~~~Gv~i~~~~~v~ 235 (463)
T 4dna_A 168 ALPESILIAGGGYIAVEFANIFHGLG--VKTTLIYRGKEIL--------SRF--DQDMRRGLHAAMEEKGIRILCEDIIQ 235 (463)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TTS--CHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHcC--CeEEEEEcCCccc--------ccc--CHHHHHHHHHHHHHCCCEEECCCEEE
Confidence 34689999999999999999999987 8999999876532 221 24566777888888999999886542
Q ss_pred ---------eEEe-cccceeccCeEEEeccCCCCCC
Q 019876 97 ---------SSVS-LSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ---------~~v~-~~~~~~~yd~lIlATGs~~p~~ 122 (334)
..+. +.++++.+|.||+|+|. .|..
T Consensus 236 ~i~~~~~~~~~v~~~~~g~i~aD~Vv~a~G~-~p~~ 270 (463)
T 4dna_A 236 SVSADADGRRVATTMKHGEIVADQVMLALGR-MPNT 270 (463)
T ss_dssp EEEECTTSCEEEEESSSCEEEESEEEECSCE-EESC
T ss_pred EEEEcCCCEEEEEEcCCCeEEeCEEEEeeCc-ccCC
Confidence 1344 54555789999999998 4654
No 184
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.04 E-value=2.5e-05 Score=70.65 Aligned_cols=90 Identities=22% Similarity=0.217 Sum_probs=66.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. + ...+...+.+.+++.||++++++.+..
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~----~~~~~~~l~~~l~~~gv~i~~~~~v~~ 209 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIA--SEVHLIHRRDGFR--------A----EKILIKRLMDKVENGNIILHTNRTLEE 209 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTS--SEEEEECSSSSCC--------C----CHHHHHHHHHHHHTSSEEEECSCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CeEEEEEeCCccc--------c----CHHHHHHHHHhcccCCeEEEcCceeEE
Confidence 4579999999999999999999987 8999999876431 1 134555666677788999998876521
Q ss_pred ---------EEeccc-------ceeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLSE-------LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~~-------~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.+ ..+++|.||+|+|. .|..
T Consensus 210 i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~-~p~~ 249 (320)
T 1trb_A 210 VTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGH-SPNT 249 (320)
T ss_dssp EEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCE-EESC
T ss_pred EEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCC-CCCh
Confidence 133322 24589999999998 4554
No 185
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=1.2e-05 Score=77.39 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=69.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+++.||+++.++.+..
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtli~~~~~~l--------~~--~~~~~~~~l~~~l~~~gv~i~~~~~v~~ 243 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIG--SEVTVVEFASEIV--------PT--MDAEIRKQFQRSLEKQGMKFKLKTKVVG 243 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHT--CEEEEECSSSSSS--------TT--SCHHHHHHHHHHHHHSSCCEECSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcC--CcEEEEEcCCccc--------cc--ccHHHHHHHHHHHHHcCCEEEeCCEEEE
Confidence 4689999999999999999999997 8999999987542 32 1345667777888889999998876521
Q ss_pred --------EEecc---c---ceeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS---E---LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~---~---~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. + ..+++|.||+|+|. .|..
T Consensus 244 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~-~p~~ 281 (470)
T 1dxl_A 244 VDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGR-TPFT 281 (470)
T ss_dssp EECSSSSEEEEEEESSSCCCEEEEESEEECCCCE-EECC
T ss_pred EEEcCCeEEEEEEecCCCcceEEECCEEEECCCC-CcCC
Confidence 22322 2 24689999999998 4654
No 186
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.03 E-value=4.3e-06 Score=79.09 Aligned_cols=40 Identities=18% Similarity=0.313 Sum_probs=36.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
|+|+|||||++|++||..|++.+ .+|+|+|+++.+||.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNG--HEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCCCceeE
Confidence 58999999999999999999997 99999999998888653
No 187
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.02 E-value=1.8e-05 Score=78.28 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=70.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 253 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERG--IEVTLVEMANQVM--------PP--IDYEMAAYVHEHMKNHDVELVFEDGVDA 253 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEecCCccc--------cc--CCHHHHHHHHHHHHHcCCEEEECCeEEE
Confidence 3579999999999999999999997 8999999876532 22 2345667777888889999998866531
Q ss_pred ------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 ------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.++ .+++|.||+|+|. .|..
T Consensus 254 i~~~~~~v~~~~g~~i~~D~Vi~a~G~-~p~~ 284 (588)
T 3ics_A 254 LEENGAVVRLKSGSVIQTDMLILAIGV-QPES 284 (588)
T ss_dssp EEGGGTEEEETTSCEEECSEEEECSCE-EECC
T ss_pred EecCCCEEEECCCCEEEcCEEEEccCC-CCCh
Confidence 2344444 4689999999998 4554
No 188
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.02 E-value=6.7e-06 Score=76.90 Aligned_cols=43 Identities=26% Similarity=0.417 Sum_probs=38.8
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC-CCCccccc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL-PTPFGLVR 61 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~-~~~gg~~~ 61 (334)
...++|+|||||++|++||..|.+.+ .+|+|+|++ +.+||.+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G--~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAG--HDVTILEANANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTS--CEEEEECSCSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCC--CcEEEEeccccccCCcee
Confidence 35689999999999999999999997 999999999 88888664
No 189
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.01 E-value=5e-06 Score=78.54 Aligned_cols=39 Identities=31% Similarity=0.594 Sum_probs=36.3
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
|+|+|||||.+|++||.+|++.+ .+|+|+|+++.+||..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G--~~V~vlE~~~~~GG~~ 39 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAG--HEVEVFERLPITGGRF 39 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSSSSBTTS
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--CceEEEeCCCCCCCce
Confidence 58999999999999999999997 9999999999888765
No 190
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.00 E-value=3.2e-06 Score=80.79 Aligned_cols=42 Identities=19% Similarity=0.273 Sum_probs=37.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcC----CCCeEEEEcCCCCCcccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAH----QEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~----~~~~v~vie~~~~~gg~~ 60 (334)
+++|+|||||++|++||.+|.+.| |+.+|+|+|+.+.+||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceE
Confidence 479999999999999999999986 568999999998888764
No 191
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=3e-05 Score=74.09 Aligned_cols=92 Identities=17% Similarity=0.110 Sum_probs=67.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. ....++...+.+.+++. ++++.+..+..
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~~~l--------~~-~~~~~~~~~l~~~l~~~-v~i~~~~~v~~ 214 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQG--KNVTMIVRGERVL--------RR-SFDKEVTDILEEKLKKH-VNLRLQEITMK 214 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSTT--------TT-TSCHHHHHHHHHHHTTT-SEEEESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--CeEEEEEcCCccc--------hh-hcCHHHHHHHHHHHHhC-cEEEeCCeEEE
Confidence 4579999999999999999999997 9999999987532 21 01345667777778887 99988865521
Q ss_pred --------EEecccceeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLSELRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~~~~~~yd~lIlATGs~~p~~ 122 (334)
.+..+..++++|.||+|+|. .|..
T Consensus 215 i~~~~~v~~v~~~g~~i~~D~Vv~a~G~-~p~~ 246 (449)
T 3kd9_A 215 IEGEERVEKVVTDAGEYKAELVILATGI-KPNI 246 (449)
T ss_dssp EECSSSCCEEEETTEEEECSEEEECSCE-EECC
T ss_pred EeccCcEEEEEeCCCEEECCEEEEeeCC-ccCH
Confidence 12223334689999999998 4553
No 192
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.99 E-value=2.9e-05 Score=74.95 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=70.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
...++++|||+|+.|+.+|..+++.+ .+|+++++.+.+. +.+ ..++...+.+.+++.|++++.++.+.
T Consensus 189 ~~~~~v~ViGgG~~g~e~A~~l~~~g--~~Vtli~~~~~~l--------~~~--~~~~~~~l~~~l~~~Gv~i~~~~~V~ 256 (484)
T 3o0h_A 189 KLPKSIVIVGGGYIGVEFANIFHGLG--VKTTLLHRGDLIL--------RNF--DYDLRQLLNDAMVAKGISIIYEATVS 256 (484)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSS--------TTS--CHHHHHHHHHHHHHHTCEEESSCCEE
T ss_pred hcCCcEEEECcCHHHHHHHHHHHHcC--CeEEEEECCCccc--------ccc--CHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 34689999999999999999999987 8999999876532 221 24566677777888899999886552
Q ss_pred e--------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.++ .+.+|.||+|+|. .|..
T Consensus 257 ~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~-~p~~ 290 (484)
T 3o0h_A 257 QVQSTENCYNVVLTNGQTICADRVMLATGR-VPNT 290 (484)
T ss_dssp EEEECSSSEEEEETTSCEEEESEEEECCCE-EECC
T ss_pred EEEeeCCEEEEEECCCcEEEcCEEEEeeCC-CcCC
Confidence 1 2444444 4689999999998 4554
No 193
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.98 E-value=5.1e-06 Score=78.68 Aligned_cols=47 Identities=23% Similarity=0.206 Sum_probs=39.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc---cccCCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR---SGVAPDH 68 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~---~~~~p~~ 68 (334)
++|+|||||++|++||..|++.| .+|+|+|+++.+||.+. .++.|++
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G--~~V~vlE~~~~~GG~~~t~~~~cipg~ 51 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAG--KKVLLLEGGERLGGRAYSRESRNVPGL 51 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSSSBTTCCEEECSSSTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHcC--CeEEEEecCCCccCeecceeccCCCCc
Confidence 58999999999999999999997 89999999888888663 2444554
No 194
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.98 E-value=2.9e-05 Score=74.68 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=69.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhc-CCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~-~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..++++|||+|+.|+.+|..+.+. + .+|+++++.+.+. |.. ...++...+.+.+++.|++++.++.+.
T Consensus 158 ~~~~vvViGgG~~g~e~A~~l~~~~g--~~Vtlv~~~~~~l--------~~~-~~~~~~~~l~~~l~~~GV~i~~~~~v~ 226 (472)
T 3iwa_A 158 EVSKAVIVGGGFIGLEMAVSLADMWG--IDTTVVELADQIM--------PGF-TSKSLSQMLRHDLEKNDVVVHTGEKVV 226 (472)
T ss_dssp SCSEEEEECCSHHHHHHHHHHHHHHC--CEEEEECSSSSSS--------TTT-SCHHHHHHHHHHHHHTTCEEECSCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcC--CcEEEEEccCccc--------ccc-cCHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 357999999999999999999998 8 8999999876532 211 124566777788888999999886542
Q ss_pred e--------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.++ .+++|.||+|+|. .|..
T Consensus 227 ~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~-~p~~ 260 (472)
T 3iwa_A 227 RLEGENGKVARVITDKRTLDADLVILAAGV-SPNT 260 (472)
T ss_dssp EEEESSSBEEEEEESSCEEECSEEEECSCE-EECC
T ss_pred EEEccCCeEEEEEeCCCEEEcCEEEECCCC-CcCH
Confidence 1 1333333 4689999999998 4553
No 195
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.97 E-value=6.7e-06 Score=78.92 Aligned_cols=43 Identities=21% Similarity=0.269 Sum_probs=37.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
+++|+|||||.+|++||.+|++.+...+|+|+|+++.+||.+.
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceE
Confidence 3699999999999999999999972229999999999888763
No 196
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.96 E-value=8.9e-06 Score=78.46 Aligned_cols=43 Identities=33% Similarity=0.460 Sum_probs=38.6
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 16 ~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
....++|+|||||++|++||..|.+.+ .+|+|+|+.+.+||.+
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g--~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAG--YKVTVLEARTRPGGRV 50 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCC--CCEEEEeccCCCCCce
Confidence 345689999999999999999999987 8999999999998864
No 197
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.95 E-value=7.4e-06 Score=76.60 Aligned_cols=36 Identities=25% Similarity=0.358 Sum_probs=32.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
.+||+||||||+|+++|..|++.| ++|+|||+.+.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G--~~v~v~Er~~~~ 36 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHG--IKVTIYERNSAA 36 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC--CCEEEEecCCCC
Confidence 379999999999999999999997 999999987653
No 198
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.94 E-value=4.1e-05 Score=73.88 Aligned_cols=92 Identities=16% Similarity=0.173 Sum_probs=68.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..+++++|||+|+.|+.+|..|++.+ .+|+++++.. + .+.+ ..++...+.+.+++.||+++.++.+.
T Consensus 185 ~~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~~-~--------l~~~--d~~~~~~l~~~l~~~Gv~i~~~~~v~ 251 (483)
T 3dgh_A 185 REPGKTLVVGAGYIGLECAGFLKGLG--YEPTVMVRSI-V--------LRGF--DQQMAELVAASMEERGIPFLRKTVPL 251 (483)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSC-S--------STTS--CHHHHHHHHHHHHHTTCCEEETEEEE
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCC-C--------Cccc--CHHHHHHHHHHHHhCCCEEEeCCEEE
Confidence 34679999999999999999999997 8999998742 1 1222 34566777888888999999887652
Q ss_pred e---------EEecccc------eeccCeEEEeccCCCCCC
Q 019876 97 S---------SVSLSEL------RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~---------~v~~~~~------~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.+. .+.+|.||+|+|. .|..
T Consensus 252 ~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~-~p~~ 291 (483)
T 3dgh_A 252 SVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR-KGLV 291 (483)
T ss_dssp EEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE-EECC
T ss_pred EEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc-ccCc
Confidence 1 1333222 3589999999998 4654
No 199
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.94 E-value=3.3e-05 Score=75.89 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=68.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. |. ...++...+.+.+++.|++++.++.+..
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~--~~~~~~~~l~~~l~~~GV~i~~~~~v~~ 217 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLG--IKTTLLELADQVM--------TP--VDREMAGFAHQAIRDQGVDLRLGTALSE 217 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSSSSC--------TT--SCHHHHHHHHHHHHHTTCEEEETCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CcEEEEEcCCccc--------hh--cCHHHHHHHHHHHHHCCCEEEeCCeEEE
Confidence 3579999999999999999999997 9999999986531 31 1345666777778889999998765421
Q ss_pred ---------------------------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 98 ---------------------------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------------------------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
.+...++ .+++|.||+|+|. .|..
T Consensus 218 i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~-~p~~ 269 (565)
T 3ntd_A 218 VSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV-RPET 269 (565)
T ss_dssp EEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE-EECC
T ss_pred EeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC-ccch
Confidence 1222233 3589999999998 4553
No 200
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.93 E-value=4.8e-05 Score=75.59 Aligned_cols=37 Identities=24% Similarity=0.448 Sum_probs=33.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..+|+|||||+||++||..|++.+++.+|+|+|+.+.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 3689999999999999999999866689999999754
No 201
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.93 E-value=7.5e-06 Score=79.75 Aligned_cols=41 Identities=22% Similarity=0.209 Sum_probs=37.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
.++|+|||||++|++||..|++.| .+|+|+|+++.+||.+.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G--~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSG--LNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSSSBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcee
Confidence 468999999999999999999997 89999999999988763
No 202
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.92 E-value=3.7e-05 Score=74.48 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=67.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcC--CCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAH--QEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~--~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
.++|+|||+|+.|+.+|..|.+.+ .+.+|+++++.+.+.+. . .+.++...+.+.+++.||++++++.+.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~----~-----l~~~~~~~~~~~l~~~GV~v~~~~~V~ 250 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK----I-----LPEYLSNWTMEKVRREGVKVMPNAIVQ 250 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT----T-----SCHHHHHHHHHHHHTTTCEEECSCCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc----c-----CCHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 579999999999999999987732 13899999886542111 1 123566677778888999999886542
Q ss_pred e--------EEecccc-eeccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.++ .+.+|.||+|+|. .|..
T Consensus 251 ~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~-~pn~ 284 (493)
T 1m6i_A 251 SVGVSSGKLLIKLKDGRKVETDHIVAAVGL-EPNV 284 (493)
T ss_dssp EEEEETTEEEEEETTSCEEEESEEEECCCE-EECC
T ss_pred EEEecCCeEEEEECCCCEEECCEEEECCCC-CccH
Confidence 1 2334444 4689999999998 4654
No 203
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=97.91 E-value=4.4e-05 Score=78.69 Aligned_cols=35 Identities=20% Similarity=0.424 Sum_probs=32.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~ 55 (334)
..+|+|||||++|+++|.+|++.+ . +|+|+|+.+.
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G--~~~V~vlE~~~~ 39 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRG--WNNITVLDQGPL 39 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCCEEEECSSCT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC--CCcEEEEeCCCC
Confidence 579999999999999999999997 7 8999999865
No 204
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.91 E-value=4.9e-05 Score=73.44 Aligned_cols=92 Identities=12% Similarity=0.135 Sum_probs=67.7
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..+++++|||+|+.|+.+|..|++.+ .+|+++++... .+.+ ..++...+.+.+++.||+++.++.+.
T Consensus 183 ~~~~~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~---------l~~~--d~~~~~~l~~~l~~~gv~~~~~~~v~ 249 (488)
T 3dgz_A 183 ESPGKTLVVGASYVALECAGFLTGIG--LDTTVMMRSIP---------LRGF--DQQMSSLVTEHMESHGTQFLKGCVPS 249 (488)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCS---------STTS--CHHHHHHHHHHHHHTTCEEEETEEEE
T ss_pred hcCCeEEEECCCHHHHHHHHHHHHcC--CceEEEEcCcc---------cccC--CHHHHHHHHHHHHHCCCEEEeCCEEE
Confidence 34578999999999999999999997 89999987531 1222 34567777888888999999886542
Q ss_pred e---------EEeccc---ce---eccCeEEEeccCCCCCC
Q 019876 97 S---------SVSLSE---LR---QLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~---------~v~~~~---~~---~~yd~lIlATGs~~p~~ 122 (334)
. .+...+ ++ +++|.||+|+|. .|..
T Consensus 250 ~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~-~p~~ 289 (488)
T 3dgz_A 250 HIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGR-VPET 289 (488)
T ss_dssp EEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCE-EESC
T ss_pred EEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccC-Cccc
Confidence 1 122222 22 579999999998 4654
No 205
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.91 E-value=5.4e-05 Score=73.85 Aligned_cols=92 Identities=16% Similarity=0.128 Sum_probs=66.2
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..+++++|||+|+.|+.+|..|++.+ .+|+++++.. + .+.+ ..++...+.+.+++.||+++.+..+.
T Consensus 208 ~~~~~vvVIGgG~ig~E~A~~l~~~G--~~Vtlv~~~~-~--------l~~~--d~~~~~~~~~~l~~~GV~v~~~~~v~ 274 (519)
T 3qfa_A 208 YCPGKTLVVGASYVALECAGFLAGIG--LDVTVMVRSI-L--------LRGF--DQDMANKIGEHMEEHGIKFIRQFVPI 274 (519)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESSC-S--------STTS--CHHHHHHHHHHHHHTTCEEEESEEEE
T ss_pred hcCCeEEEECCcHHHHHHHHHHHHcC--CeEEEEeccc-c--------cccC--CHHHHHHHHHHHHHCCCEEEeCCeEE
Confidence 34568999999999999999999997 8999998742 1 1322 34567777788888999999885431
Q ss_pred e------------EEec--ccc----eeccCeEEEeccCCCCCC
Q 019876 97 S------------SVSL--SEL----RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~------------~v~~--~~~----~~~yd~lIlATGs~~p~~ 122 (334)
. .+.. .++ ..++|.||+|+|. .|..
T Consensus 275 ~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~-~p~~ 317 (519)
T 3qfa_A 275 KVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGR-DACT 317 (519)
T ss_dssp EEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCE-EESC
T ss_pred EEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCC-cccC
Confidence 1 1111 122 2469999999998 4654
No 206
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.91 E-value=1.1e-05 Score=77.40 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=38.3
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
+++|+|||||++|+++|.+|.+.+++.+|+|+|+++.+||.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCcee
Confidence 579999999999999999999997779999999998888754
No 207
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.90 E-value=1.1e-05 Score=76.22 Aligned_cols=43 Identities=23% Similarity=0.350 Sum_probs=37.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++|+|||||++|++||..|++.++ .+|+|+|+++.+||.+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~-~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGF-HDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCC-CcEEEEECCCCCCCccc
Confidence 46799999999999999999999842 79999999999988653
No 208
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.89 E-value=5.9e-05 Score=68.62 Aligned_cols=90 Identities=16% Similarity=0.172 Sum_probs=66.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. .+....+.+.+++.+++++.+..+..
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g--~~V~~v~~~~~~~--------~~----~~~~~~l~~~l~~~gv~v~~~~~v~~ 216 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTA--RRITLIHRRPQFR--------AH----EASVKELMKAHEEGRLEVLTPYELRR 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTS--SEEEEECSSSSCC--------SC----HHHHHHHHHHHHTTSSEEETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhC--CEEEEEEcCCccC--------cc----HHHHHHHHhccccCCeEEecCCccee
Confidence 3579999999999999999999886 8999999876431 21 23455667777888999998865521
Q ss_pred --------EEecc---cc---eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS---EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~---~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+++|.||+|+|. .|..
T Consensus 217 i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 254 (335)
T 2zbw_A 217 VEGDERVRWAVVFHNQTQEELALEVDAVLILAGY-ITKL 254 (335)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECCCE-EEEC
T ss_pred EccCCCeeEEEEEECCCCceEEEecCEEEEeecC-CCCc
Confidence 23333 33 4589999999998 4543
No 209
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.89 E-value=9.9e-06 Score=77.69 Aligned_cols=42 Identities=19% Similarity=0.078 Sum_probs=38.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++|+|||||.+|++||..|++.| .+|+|+|+++.+||.+.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G--~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDG--KKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCCCCCcccc
Confidence 4579999999999999999999997 99999999999999764
No 210
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.88 E-value=7.4e-06 Score=79.81 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=37.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
..++|+|||||++||+||..|.+.| ..+|+|+|+++.+||.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G-~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNG-IQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTT-CCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcC-CCCEEEEeCCCCCCCce
Confidence 3469999999999999999999984 37999999999999875
No 211
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.87 E-value=5.1e-05 Score=69.97 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=64.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCC-cEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHER-CSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~-i~~~~~~~v~ 96 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+... ..-+.......+...+.+.+++.| ++++.+..+.
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g--~~V~lv~~~~~~~~~---~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~ 239 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNG--SDIALYTSTTGLNDP---DADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVK 239 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTT--CEEEEECC-------------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcC--CeEEEEecCCCCCCC---CCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEE
Confidence 3569999999999999999999987 899999987653210 011222223455667777778886 9998876542
Q ss_pred e--------EEecccce-e-ccCeEEEeccCCCCCC
Q 019876 97 S--------SVSLSELR-Q-LYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~--------~v~~~~~~-~-~yd~lIlATGs~~p~~ 122 (334)
. .+.+.+++ . .+|.+|+|||. .|..
T Consensus 240 ~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~-~~~~ 274 (369)
T 3d1c_A 240 DIDFNNGQYHISFDSGQSVHTPHEPILATGF-DATK 274 (369)
T ss_dssp EEEEETTEEEEEESSSCCEEESSCCEECCCB-CGGG
T ss_pred EEEecCCceEEEecCCeEeccCCceEEeecc-CCcc
Confidence 1 23333443 3 46999999998 4544
No 212
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.87 E-value=7.1e-06 Score=78.27 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=37.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
.++|+|||||++|++||.+|++.+ .+|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAG--LSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CcEEEEECCCCCCCcee
Confidence 469999999999999999999987 89999999999988763
No 213
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.86 E-value=3.6e-05 Score=74.78 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=66.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcC------------CCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAH------------QEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERC 87 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~------------~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i 87 (334)
.+++|||||+.|+.+|..|.... ...+|+|+|..+.+ .|.+ .+++..+..+.+++.||
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i--------l~~~--~~~~~~~~~~~L~~~GV 287 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV--------LNMF--EKKLSSYAQSHLENTSI 287 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS--------STTS--CHHHHHHHHHHHHHTTC
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc--------ccCC--CHHHHHHHHHHHHhcce
Confidence 57999999999999999886431 13689999998764 2332 35677788888999999
Q ss_pred EEEeCeEEce----EE----ecccc-----eeccCeEEEeccCCCCC
Q 019876 88 SFFGNVTLGS----SV----SLSEL-----RQLYHVVVLAYGAESDR 121 (334)
Q Consensus 88 ~~~~~~~v~~----~v----~~~~~-----~~~yd~lIlATGs~~p~ 121 (334)
++++++.+.. .+ ...++ +++||.||+|+|. .|+
T Consensus 288 ~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv-~~~ 333 (502)
T 4g6h_A 288 KVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN-KAR 333 (502)
T ss_dssp EEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE-ECC
T ss_pred eeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC-cCC
Confidence 9999987631 11 11222 3689999999998 354
No 214
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.85 E-value=1.3e-05 Score=75.55 Aligned_cols=41 Identities=29% Similarity=0.365 Sum_probs=37.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhc-CCCCeEEEEcCCCCCccccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~-~~~~~v~vie~~~~~gg~~~ 61 (334)
.++|+|||||++|++||..|.+. + .+|+|+|+++.+||.+.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g--~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLD--KRVLVLERRPHIGGNAY 48 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSC--CCEEEECSSSSSSGGGC
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCC--CCEEEEeCCCCCCCeee
Confidence 57999999999999999999998 6 89999999999988764
No 215
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.85 E-value=1.2e-05 Score=77.11 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=37.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++|+|||||++|++||..|++.| .+|+|+|+++.+||.+.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g--~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRG--TDAVLLESSARLGGAVG 56 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTT--CCEEEECSSSSSBTTCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCC--CCEEEEEcCCCCCceee
Confidence 4579999999999999999999987 99999999999988753
No 216
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.84 E-value=1.6e-05 Score=74.87 Aligned_cols=42 Identities=31% Similarity=0.331 Sum_probs=38.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++|+|||||++|+++|..|++.+ .+|+|+|+.+.+||.+.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g--~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSG--QRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSSGGGC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCC--CceEEEeccCCCCCccc
Confidence 4579999999999999999999986 89999999999988765
No 217
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.81 E-value=4.6e-05 Score=72.88 Aligned_cols=38 Identities=18% Similarity=0.348 Sum_probs=33.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||+|..|+.+|..|.+..++.+|+++++.+.
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 46799999999999999999999855599999998864
No 218
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.81 E-value=1.5e-05 Score=77.06 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=37.2
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
++|+|||||++|++||..|.+.+ .+|+|+|+++.+||.+.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g--~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAG--FKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTT--CCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--CCEEEEeCCCCCCCcce
Confidence 79999999999999999999987 99999999999998753
No 219
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.80 E-value=8e-05 Score=67.55 Aligned_cols=87 Identities=15% Similarity=0.132 Sum_probs=61.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. + ...+ ...+.+..||+++.+..+..
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g--~~v~~v~~~~~~~--------~----~~~~---~~~l~~~~gv~i~~~~~v~~ 234 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYG--SKVFMLVRKDHLR--------A----STIM---QKRAEKNEKIEILYNTVALE 234 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTS--SEEEEECSSSSCC--------S----CHHH---HHHHHHCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEEcCCccC--------C----CHHH---HHHHHhcCCeEEeecceeEE
Confidence 4679999999999999999999987 8999999876531 1 1122 22223445999998876521
Q ss_pred ---------EEeccc------ceeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLSE------LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~~------~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.+ ..+++|.||+|+|. .|..
T Consensus 235 i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 273 (338)
T 3itj_A 235 AKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGH-TPAT 273 (338)
T ss_dssp EEESSSSEEEEEEEETTTTEEEEEECSEEEECSCE-EECC
T ss_pred EEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCC-CCCh
Confidence 133333 23589999999998 4544
No 220
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.78 E-value=2.1e-05 Score=76.07 Aligned_cols=41 Identities=24% Similarity=0.296 Sum_probs=37.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
..++|+|||||++|++||..|.+.+ .+|+|+|+.+.+||.+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHG--LNVTVFEAEGKAGGKL 52 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTS--CEEEEECSSSSSCSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEEeCCCCCCce
Confidence 3579999999999999999999987 9999999999998865
No 221
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.78 E-value=2.4e-05 Score=73.43 Aligned_cols=41 Identities=24% Similarity=0.264 Sum_probs=37.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
.++|+|||||++|+++|..|.+.+ .+|+|+|+++.+||.+.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~~~GG~~~ 43 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKG--HQVHIIDQRDHIGGNSY 43 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT--CEEEEEESSSSSSGGGC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEEecCCcCCccc
Confidence 479999999999999999999986 99999999999988763
No 222
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.76 E-value=2.8e-05 Score=75.17 Aligned_cols=41 Identities=37% Similarity=0.468 Sum_probs=37.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
..++|+|||||++|++||..|.+.| .+|+|+|+.+.+||.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g--~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAG--HQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHT--CEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CeEEEEECCCCCCCce
Confidence 4679999999999999999999997 9999999999998865
No 223
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.74 E-value=2.4e-05 Score=72.95 Aligned_cols=40 Identities=25% Similarity=0.214 Sum_probs=36.6
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
++|+|||||++|+++|..|.+.+ .+|+|+|+++.+||.+.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g--~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLN--KKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGT--CCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--CcEEEEecCCCCCcceE
Confidence 58999999999999999999987 89999999998888753
No 224
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.73 E-value=1.2e-05 Score=78.06 Aligned_cols=160 Identities=14% Similarity=0.046 Sum_probs=85.2
Q ss_pred ccCeEEEeccCCCCCCCCCCCccCCCccchhhHHHHhcC------CCCCCCCCCCCCCCCeEEEEcCCHHHHHHHHHHcc
Q 019876 107 LYHVVVLAYGAESDRALGIPGEDLIGVHSAREFVWWYNG------HPDGKNLSPDLKSTDTAVILGQGNVALDVARILLR 180 (334)
Q Consensus 107 ~yd~lIlATGs~~p~~~~ipG~~~~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~k~vvVIG~G~~g~e~A~~L~~ 180 (334)
.||++++++|+. |..+++++.+.++++........... ..... ........+|+|||||.+|+.+|..|++
T Consensus 37 ~~~~l~~~~g~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dVvIVGgG~aGl~aA~~La~ 113 (497)
T 2bry_A 37 SFQGLCRALGVE-SGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQPVYQ--QGQACTNTKCLVVGAGPCGLRAAVELAL 113 (497)
T ss_dssp HHHHHHHHHTCC-TTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTSGGGG--GGTTTTTCEEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CCCCcEeehhhHHHHHHHHHHHhhhhhhhhhcccccc--CccccCCCCEEEECccHHHHHHHHHHHH
Confidence 689999999994 77777766554444433221111000 00000 0011246799999999999999999996
Q ss_pred CCcccccccccHHHHHHHhcCCcceEEEEeecCcccc----CCCHHHHHHHHcCCceEEEEccCccCCCCCchhhhhccH
Q 019876 181 PTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQA----ACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSR 256 (334)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~----~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~ 256 (334)
.|. +|+|+++++.+.. ...+..+ +.+...|+.-... .+. ........
T Consensus 114 --------------------~G~-~V~liEk~~~~g~~~~~~~~~~~~-~~l~~~g~~~~~~--~~~--~~~~~~~~--- 164 (497)
T 2bry_A 114 --------------------LGA-RVVLVEKRIKFSRHNVLHLWPFTI-HDLRALGAKKFYG--RFC--TGTLDHIS--- 164 (497)
T ss_dssp --------------------TTC-EEEEEESCSSCCCCCEEECCHHHH-HHHHTTTHHHHCT--TTT--CTTCCEEE---
T ss_pred --------------------CCC-eEEEEEeccccCCCCcccCChhHH-HHHHHcCCccccc--ccc--ccccccCC---
Confidence 676 6999999865421 1222222 2333333210000 000 00000000
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEEEE
Q 019876 257 IQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGVHF 309 (334)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v~~ 309 (334)
..++.+.|.+.+. +.||++++++.+++|.... .++....|.+
T Consensus 165 -~~~l~~~L~~~~~---------~~gv~v~~~~~v~~i~~~~-~~~~~~~v~~ 206 (497)
T 2bry_A 165 -IRQLQLLLLKVAL---------LLGVEIHWGVKFTGLQPPP-RKGSGWRAQL 206 (497)
T ss_dssp -HHHHHHHHHHHHH---------HTTCEEEESCEEEEEECCC-STTCCBEEEE
T ss_pred -HHHHHHHHHHHHH---------hCCCEEEeCCEEEEEEEec-CCCCEEEEEE
Confidence 1233344555543 4589999999999997210 1234455666
No 225
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.68 E-value=0.00014 Score=67.09 Aligned_cols=90 Identities=16% Similarity=0.149 Sum_probs=64.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. ..+...+.+..++.+++++.++.+..
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~~--------~~----~~~~~~l~~~~~~~gv~i~~~~~v~~ 227 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNA--ASVTLVHRGHEFQ--------GH----GKTAHEVERARANGTIDVYLETEVAS 227 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTS--SEEEEECSSSSCS--------SC----SHHHHSSHHHHHHTSEEEESSEEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcC--CEEEEEEcCCCCC--------CC----HHHHHHHHHHhhcCceEEEcCcCHHH
Confidence 3579999999999999999999986 8999999876431 11 12334455556677899988865421
Q ss_pred ---------EEecc--cc---eeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLS--EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~--~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+++|.||+|+|. .|..
T Consensus 228 i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 265 (360)
T 3ab1_A 228 IEESNGVLTRVHLRSSDGSKWTVEADRLLILIGF-KSNL 265 (360)
T ss_dssp EEEETTEEEEEEEEETTCCEEEEECSEEEECCCB-CCSC
T ss_pred hccCCCceEEEEEEecCCCeEEEeCCEEEECCCC-CCCH
Confidence 23332 33 3589999999997 4543
No 226
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.67 E-value=0.00024 Score=64.32 Aligned_cols=87 Identities=20% Similarity=0.207 Sum_probs=61.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ..+ ...+.+..+|+++.++.+..
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~~----~~~---~~~l~~~~gv~i~~~~~v~~ 213 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFA--DEVTVIHRRDTLR--------AN----KVA---QARAFANPKMKFIWDTAVEE 213 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTC--SEEEEECSSSSCC--------SC----HHH---HHHHHTCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEeCCCcCC--------cc----hHH---HHHHHhcCCceEecCCceEE
Confidence 3579999999999999999999986 8999999876431 11 122 22334456999988876521
Q ss_pred --------EEecc---cc---eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS---EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~---~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+++|.||+|+|. .|..
T Consensus 214 i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 251 (325)
T 2q7v_A 214 IQGADSVSGVKLRNLKTGEVSELATDGVFIFIGH-VPNT 251 (325)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECSCE-EESC
T ss_pred EccCCcEEEEEEEECCCCcEEEEEcCEEEEccCC-CCCh
Confidence 23332 23 3589999999998 4553
No 227
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.66 E-value=4.2e-05 Score=73.98 Aligned_cols=44 Identities=25% Similarity=0.375 Sum_probs=38.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRS 62 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~ 62 (334)
..++|+|||||++|+++|..|.+.+ ..+|+|+|+++.+||.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g-~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELG-YKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTT-CCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEeCCCCCCCeeee
Confidence 4579999999999999999999985 3699999999999887653
No 228
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.66 E-value=0.00011 Score=60.82 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=30.2
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccc
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ 216 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~ 216 (334)
+|+|||||.+|+++|..|++ .|. +|+++++++.++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~--------------------~g~-~v~lie~~~~~~ 37 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLAR--------------------AGL-KVLVLDGGRSKV 37 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEECSCCTT
T ss_pred eEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEeCCCCcc
Confidence 69999999999999999996 565 699999987543
No 229
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.65 E-value=3.4e-05 Score=73.36 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.+++|+||||||+|+++|..|++.| ++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G--~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHD--VDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTT--CEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCC--CeEEEEcCCC
Confidence 3479999999999999999999997 9999999875
No 230
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=97.64 E-value=4.9e-05 Score=72.13 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=34.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCCCc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPF 57 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~~g 57 (334)
...+|+|||||++|+++|.+|++.+ . +|+|+|+.+.++
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G--~~~V~vlE~~~~~~ 43 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRG--YTNVTVLDPYPVPS 43 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTT--CCCEEEEESSCSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcC--CCcEEEEeCCCCCC
Confidence 3579999999999999999999997 8 999999987654
No 231
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.63 E-value=6.5e-05 Score=75.48 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=38.8
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
...++|+|||||++|++||..|.+.| ++|+|+|+.+.+||.+.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g--~~v~~~e~~~~~gg~~~ 147 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFG--MDVTLLEARDRVGGRVA 147 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTT--CEEEEECSSSSSBTTCC
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCC--CeEEEEecCCCCCCccc
Confidence 45689999999999999999999997 99999999999988653
No 232
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.62 E-value=0.00022 Score=70.60 Aligned_cols=91 Identities=12% Similarity=0.129 Sum_probs=64.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|++.+ .+|+++++. .+ .|.+ ..++...+.+.+++.||+++++..+..
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g--~~Vtlv~~~-~~--------l~~~--d~~~~~~~~~~l~~~gv~i~~~~~v~~ 351 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLG--GDVTVMVRS-IL--------LRGF--DQQMAEKVGDYMENHGVKFAKLCVPDE 351 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESS-CS--------STTS--CHHHHHHHHHHHHHTTCEEEETEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEECC-cC--------cCcC--CHHHHHHHHHHHHhCCCEEEECCeEEE
Confidence 3568999999999999999999997 899999986 21 1322 235566677778888999988753211
Q ss_pred ---------------E--Ee--cccc-ee--ccCeEEEeccCCCCCC
Q 019876 98 ---------------S--VS--LSEL-RQ--LYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------------~--v~--~~~~-~~--~yd~lIlATGs~~p~~ 122 (334)
. +. ..++ +. ++|.||+|+|. .|..
T Consensus 352 v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~-~p~~ 397 (598)
T 2x8g_A 352 IKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGR-EPQL 397 (598)
T ss_dssp EEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCE-EECG
T ss_pred EEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCC-cccc
Confidence 1 11 1222 23 49999999998 4654
No 233
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.62 E-value=0.00033 Score=62.77 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=62.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. + ..++ +.+.+++.|++++.++.+..
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g--~~v~~~~~~~~~~--------~----~~~~---~~~~~~~~gv~~~~~~~v~~ 208 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANIC--SKIYLIHRRDEFR--------A----APST---VEKVKKNEKIELITSASVDE 208 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTS--SEEEEECSSSSCB--------S----CHHH---HHHHHHCTTEEEECSCEEEE
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhC--CEEEEEEeCCCCC--------C----CHHH---HHHHHhcCCeEEEeCcEEEE
Confidence 4579999999999999999999986 8999999876531 1 1122 23444678999998876521
Q ss_pred ---------EEecc--cc---eeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLS--EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~--~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+++|.||+|+|. .|..
T Consensus 209 i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~-~p~~ 246 (315)
T 3r9u_A 209 VYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL-NVRN 246 (315)
T ss_dssp EEEETTEEEEEEEECTTSCEEEECCSCEEECSCE-EECC
T ss_pred EEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC-CCCc
Confidence 13332 33 4689999999998 4654
No 234
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.61 E-value=3.5e-05 Score=70.89 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=32.6
Q ss_pred CeEEEECCchHHHHHHHHHhhcC----CCCeEEEEcCCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAH----QEAQVDIIDRLPT 55 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~----~~~~v~vie~~~~ 55 (334)
|+|+|||||.+|+++|.+|++.+ |+.+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 58999999999999999999986 5689999999854
No 235
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.61 E-value=0.00031 Score=64.04 Aligned_cols=87 Identities=18% Similarity=0.255 Sum_probs=61.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. +.+. .+++++.||+++.+..+..
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g--~~V~l~~~~~~~~--------~~----~~~~---~~~~~~~gV~v~~~~~v~~ 216 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFA--RSVTLVHRRDEFR--------AS----KIML---DRARNNDKIRFLTNHTVVA 216 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTC--SEEEEECSSSSCS--------SC----TTHH---HHHHHCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--CeEEEEEcCCcCC--------cc----HHHH---HHHhccCCcEEEeCceeEE
Confidence 4689999999999999999999986 8999999876431 11 1111 2334567999998876521
Q ss_pred --------EEecc---c---ceeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS---E---LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~---~---~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. + ..+++|.||+|+|. .|..
T Consensus 217 i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 254 (335)
T 2a87_A 217 VDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGH-EPRS 254 (335)
T ss_dssp EECSSSCCEEEEEEETTSCCEEECCSCEEECSCE-EECC
T ss_pred EecCCcEeEEEEEEcCCCceEEeecCEEEEccCC-ccCh
Confidence 13332 1 24589999999998 4654
No 236
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.61 E-value=0.00035 Score=62.75 Aligned_cols=87 Identities=15% Similarity=0.130 Sum_probs=60.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. . ...+ ...+.++.||+++.+..+..
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~----~~~~---~~~l~~~~gv~v~~~~~v~~ 204 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANIC--KKVYLIHRRDGFR--------C----APIT---LEHAKNNDKIEFLTPYVVEE 204 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTS--SEEEEECSSSSCC--------S----CHHH---HHHHHTCTTEEEETTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEeeCCccC--------C----CHHH---HHHHhhCCCeEEEeCCEEEE
Confidence 3589999999999999999999986 8999999876431 1 1122 22233457899988765421
Q ss_pred ---------EEecc---cc---eeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLS---EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~---~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+++|.||+|+|. .|..
T Consensus 205 i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 243 (311)
T 2q0l_A 205 IKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGY-DVNN 243 (311)
T ss_dssp EEEETTEEEEEEEEETTTCCEEEEECSEEEECSCE-EECC
T ss_pred EECCCCcEeEEEEEecCCCceEEEecCEEEEEecC-ccCh
Confidence 13333 23 3589999999998 4654
No 237
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.60 E-value=0.0003 Score=63.12 Aligned_cols=86 Identities=13% Similarity=0.172 Sum_probs=60.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhc-CCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQH-ERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~-~~i~~~~~~~v~ 96 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. . ... +.+.+.+ .+++++.+..+.
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~Vtlv~~~~~~~--------~----~~~----~~~~l~~~~gv~v~~~~~v~ 204 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIV--EHVTLLEFAPEMK--------A----DQV----LQDKLRSLKNVDIILNAQTT 204 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTB--SEEEEECSSSSCC--------S----CHH----HHHHHHTCTTEEEESSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--CEEEEEEeCcccC--------c----cHH----HHHHHhhCCCeEEecCCceE
Confidence 3579999999999999999999986 8999999876531 1 111 2233444 689998886652
Q ss_pred e---------EEeccc---c---eeccCeEEEeccCCCCCC
Q 019876 97 S---------SVSLSE---L---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~---------~v~~~~---~---~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.+ + .+.+|.||+|+|. .|..
T Consensus 205 ~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 244 (310)
T 1fl2_A 205 EVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL-LPNT 244 (310)
T ss_dssp EEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE-EESC
T ss_pred EEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC-ccCc
Confidence 1 133322 2 3579999999998 4553
No 238
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.60 E-value=0.00035 Score=63.37 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=61.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. ..+ ..+.+++.+|+++.+..+..
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g--~~V~lv~~~~~~~--------~~----~~~---~~~~~~~~gv~i~~~~~v~~ 220 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYG--SKVYIIHRRDAFR--------AS----KIM---QQRALSNPKIDVIWNSSVVE 220 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS--SEEEEECSSSSCC--------SC----HHH---HHHHHTCTTEEEECSEEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcC--CeEEEEecCCcCC--------cc----HHH---HHHHHhCCCeeEecCCceEE
Confidence 4679999999999999999999986 8999999876431 11 111 12345678999988766521
Q ss_pred -----------EEecc---c---ceeccCeEEEeccCCCCCC
Q 019876 98 -----------SVSLS---E---LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 -----------~v~~~---~---~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. + ..+++|.||+|+|. .|..
T Consensus 221 i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 261 (333)
T 1vdc_A 221 AYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH-EPAT 261 (333)
T ss_dssp EEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE-EESC
T ss_pred EeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC-ccch
Confidence 13332 1 23589999999998 4554
No 239
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.57 E-value=0.00024 Score=71.74 Aligned_cols=94 Identities=15% Similarity=0.051 Sum_probs=66.4
Q ss_pred CCCCeEEEEC--CchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeE
Q 019876 17 SNPLRVCVVG--SGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (334)
Q Consensus 17 ~~~~~vvIIG--aG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (334)
...++|+||| +|+.|+.+|..|.+.+ .+|+++++.+.+..... .......+.+.+++.||+++.++.
T Consensus 521 ~~g~~VvViG~ggG~~g~e~A~~L~~~g--~~Vtlv~~~~~l~~~~~---------~~~~~~~l~~~l~~~GV~i~~~~~ 589 (690)
T 3k30_A 521 PDGKKVVVYDDDHYYLGGVVAELLAQKG--YEVSIVTPGAQVSSWTN---------NTFEVNRIQRRLIENGVARVTDHA 589 (690)
T ss_dssp CSSSEEEEEECSCSSHHHHHHHHHHHTT--CEEEEEESSSSTTGGGG---------GGTCHHHHHHHHHHTTCEEEESEE
T ss_pred CCCCEEEEEcCCCCccHHHHHHHHHhCC--CeeEEEecccccccccc---------cchhHHHHHHHHHHCCCEEEcCcE
Confidence 3457899999 9999999999999997 89999998765432111 112234556667788999999977
Q ss_pred Ece------EEec---ccc-eeccCeEEEeccCCCCCC
Q 019876 95 LGS------SVSL---SEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 95 v~~------~v~~---~~~-~~~yd~lIlATGs~~p~~ 122 (334)
+.. .+.. .+. .+.+|.||+|+|. .|..
T Consensus 590 V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~-~p~~ 626 (690)
T 3k30_A 590 VVAVGAGGVTVRDTYASIERELECDAVVMVTAR-LPRE 626 (690)
T ss_dssp EEEEETTEEEEEETTTCCEEEEECSEEEEESCE-EECC
T ss_pred EEEEECCeEEEEEccCCeEEEEECCEEEECCCC-CCCh
Confidence 631 1221 122 3589999999998 4543
No 240
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.56 E-value=9.1e-05 Score=76.29 Aligned_cols=42 Identities=21% Similarity=0.290 Sum_probs=38.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
...++|+|||||++|++||..|.+.| ++|+|||+.+.+||.+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g--~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFG--MDVTLLEARDRVGGRV 317 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSCTTC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEEecCcCCCce
Confidence 35689999999999999999999997 9999999999998865
No 241
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.55 E-value=0.00031 Score=67.43 Aligned_cols=91 Identities=21% Similarity=0.206 Sum_probs=62.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. |.+ ...++...+.+.++ |+++.+..+..
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g--~~Vtlv~~~~~~l--------~~~-~d~~~~~~l~~~l~---v~i~~~~~v~~ 236 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMG--VQTHIIEMLDRAL--------ITL-EDQDIVNTLLSILK---LNIKFNSPVTE 236 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSSSSC--------TTS-CCHHHHHHHHHHHC---CCEECSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcC--CEEEEEEeCCcCC--------CCC-CCHHHHHHHHhcCE---EEEEECCEEEE
Confidence 4689999999999999999999997 8999999877531 221 02345555555554 77776654311
Q ss_pred ---------EEecc--cc---eeccCeEEEeccCCCCCCC
Q 019876 98 ---------SVSLS--EL---RQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 ---------~v~~~--~~---~~~yd~lIlATGs~~p~~~ 123 (334)
.+.+. ++ .+++|.||+|+|. .|...
T Consensus 237 i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~-~p~~~ 275 (466)
T 3l8k_A 237 VKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGR-RPVIP 275 (466)
T ss_dssp EEEEETTEEEEEECCTTSCCEEEEESCEEECCCE-EECCC
T ss_pred EEEcCCCcEEEEEEecCCceEEEEcCEEEECcCC-Ccccc
Confidence 13333 22 4689999999998 46543
No 242
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.51 E-value=0.00011 Score=67.73 Aligned_cols=36 Identities=31% Similarity=0.331 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||||++|+++|..|++.+ .+|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G--~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKG--YSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC--CEEEEEeccCC
Confidence 4579999999999999999999987 99999998754
No 243
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.50 E-value=0.00041 Score=62.61 Aligned_cols=85 Identities=16% Similarity=0.174 Sum_probs=60.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 97 (334)
.++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. + ...+ .+.+.+.|++++.++.+..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g--~~V~~i~~~~~~~--------~----~~~l----~~~l~~~gv~i~~~~~v~~i 216 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYV--KNVTIIEYMPKYM--------C----ENAY----VQEIKKRNIPYIMNAQVTEI 216 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTB--SEEEEECSSSSCC--------S----CHHH----HHHHHHTTCCEECSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhC--CcEEEEEcCCccC--------C----CHHH----HHHHhcCCcEEEcCCeEEEE
Confidence 579999999999999999999986 8999999876431 1 1222 2333467899988866521
Q ss_pred --------EEecc---cc---eeccCeEEEeccCCCCCC
Q 019876 98 --------SVSLS---EL---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 --------~v~~~---~~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+. ++ .+.+|.||+|+|. .|..
T Consensus 217 ~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~-~p~~ 254 (319)
T 3cty_A 217 VGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL-IPQT 254 (319)
T ss_dssp EESSSSEEEEEEEETTTCCEEEECCSEEEECCCE-EECC
T ss_pred ecCCceEEEEEEEEcCCCceEEEecCEEEEeeCC-ccCh
Confidence 13332 23 3589999999998 4554
No 244
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.50 E-value=0.00049 Score=61.76 Aligned_cols=86 Identities=20% Similarity=0.156 Sum_probs=62.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++++|||+|+.|+.+|..|.+.+ .+|+++++.+.+. +. .. ...+..+..||+++.+..+..
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g--~~v~~~~~~~~~~--------~~----~~---~~~~~~~~~gv~~~~~~~v~~ 215 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYS--TKVYLIHRRDTFK--------AQ----PI---YVETVKKKPNVEFVLNSVVKE 215 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHS--SEEEEECSSSSCC--------SC----HH---HHHHHHTCTTEEEECSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhC--CeEEEEEeCCCCC--------cC----HH---HHHHHHhCCCcEEEeCCEEEE
Confidence 4579999999999999999999987 8999999876531 21 12 233444556999998876521
Q ss_pred --------EEeccc---c---eeccCeEEEeccCCCCC
Q 019876 98 --------SVSLSE---L---RQLYHVVVLAYGAESDR 121 (334)
Q Consensus 98 --------~v~~~~---~---~~~yd~lIlATGs~~p~ 121 (334)
.+.+.+ + .+++|.||+|+|. .|.
T Consensus 216 i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~-~p~ 252 (323)
T 3f8d_A 216 IKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGF-DPP 252 (323)
T ss_dssp EEESSSEEEEEEEETTTCCEEEEECSEEEECCCE-ECC
T ss_pred EeccCceeEEEEEECCCCceEEEEcCEEEEEECC-CCC
Confidence 133332 3 3589999999998 454
No 245
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.50 E-value=9e-05 Score=70.55 Aligned_cols=42 Identities=21% Similarity=0.131 Sum_probs=37.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++|+|||+|++|+++|..|.+.| .+|+|+|+++.+||.+.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g--~~v~~~e~~~~~gg~~~ 46 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNG--KKVLHMDRNPYYGGESS 46 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCTTSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCC--CcEEEEecCCCcccccc
Confidence 3579999999999999999999987 99999999999888753
No 246
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.48 E-value=9.3e-05 Score=69.17 Aligned_cols=36 Identities=31% Similarity=0.406 Sum_probs=32.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+|+|||||++|+++|..|++.| .+|+|+|+.+.+
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G--~~V~vlE~~~~~ 39 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERG--HRVLVLERHTFF 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCCCC
Confidence 369999999999999999999997 999999998654
No 247
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.47 E-value=0.0001 Score=70.81 Aligned_cols=42 Identities=26% Similarity=0.283 Sum_probs=36.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~~gg~~~ 61 (334)
..++|+|||||++|+++|..|.+.+ . +|+|+|+.+.+||.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g--~~~v~~~e~~~~~gg~~~ 45 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAG--ITDLLILEATDHIGGRMH 45 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTT--CCCEEEECSSSSSBTTSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcC--CCceEEEeCCCCCCCcee
Confidence 3579999999999999999999987 7 8999999998888653
No 248
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.45 E-value=0.0001 Score=71.74 Aligned_cols=38 Identities=29% Similarity=0.302 Sum_probs=34.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
..+|+|||+|++|++||..|++.+ .+|+|+|+.+.+||
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G--~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAG--ADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeCCCCCCC
Confidence 468999999999999999999997 99999999987654
No 249
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.43 E-value=0.00014 Score=71.02 Aligned_cols=36 Identities=22% Similarity=0.461 Sum_probs=32.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhh---cCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~---~~~~~~v~vie~~~~ 55 (334)
+.++|+|||||++|+++|..|++ .| .+|+|||+.+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G--~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQ--ANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSS--CEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCC--CEEEEECCCCC
Confidence 35799999999999999999999 65 99999999653
No 250
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.40 E-value=0.00016 Score=70.92 Aligned_cols=37 Identities=24% Similarity=0.347 Sum_probs=31.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcC-CCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAH-QEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~-~~~~v~vie~~~ 54 (334)
..++|+|||||++|+++|..|++.. .+.+|+|||+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4679999999999999999999932 249999999864
No 251
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.39 E-value=0.00016 Score=70.56 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhh------------cCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLK------------AHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~------------~~~~~~v~vie~~~~ 55 (334)
..++|+|||||+||+.+|..|++ .+ .+|+|||+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G--~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPK--LNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCS--CEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCC--CeEEEEeCCCC
Confidence 35799999999999999999999 55 99999998754
No 252
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.38 E-value=0.00037 Score=61.86 Aligned_cols=83 Identities=6% Similarity=-0.049 Sum_probs=59.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
..++++|||+|+.|+.+|..|.+.+ +|+++.+.+.. . . ..+.+.+.+.||+++. ..+.
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g---~v~~v~~~~~~-------~------~----~~~~~~l~~~gv~i~~-~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG---ETTFFTNGIVE-------P------D----ADQHALLAARGVRVET-TRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS---EEEEECTTTCC-------C------C----HHHHHHHHHTTCEEEC-SCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC---cEEEEECCCCC-------C------C----HHHHHHHHHCCcEEEc-ceeee
Confidence 4689999999999999999999883 99999876530 1 1 1244566778999885 3331
Q ss_pred ----eEEecccc-eeccCeEEEeccCCCCCC
Q 019876 97 ----SSVSLSEL-RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ----~~v~~~~~-~~~yd~lIlATGs~~p~~ 122 (334)
..+.+.++ .+++|.||+|+|. .|..
T Consensus 199 i~~~~~v~~~~g~~~~~D~vi~a~G~-~p~~ 228 (297)
T 3fbs_A 199 IAGHADVVLADGRSIALAGLFTQPKL-RITV 228 (297)
T ss_dssp EETTEEEEETTSCEEEESEEEECCEE-ECCC
T ss_pred eecCCeEEeCCCCEEEEEEEEEccCc-ccCc
Confidence 13444444 3589999999998 4543
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.38 E-value=0.00076 Score=60.82 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=61.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 97 (334)
.++++|||+|+.|+.+|..|++.+ .+|+++++.+.+. +. ... .+.+++.||+++.+..+..
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~--~~v~~~~~~~~~~--------~~----~~~----~~~l~~~gv~~~~~~~v~~i 215 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIA--KEVSIIHRRDKFR--------AH----EHS----VENLHASKVNVLTPFVPAEL 215 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTB--SEEEEECSSSSCS--------SC----HHH----HHHHHHSSCEEETTEEEEEE
T ss_pred CCEEEEECCCHhHHHHHHHHHhhC--CeEEEEEecCcCC--------cc----HHH----HHHHhcCCeEEEeCceeeEE
Confidence 579999999999999999999986 8999999876431 11 111 2235677999998876531
Q ss_pred -------EEeccc------ceeccCeEEEeccCCCCCC
Q 019876 98 -------SVSLSE------LRQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 -------~v~~~~------~~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.+ ..+.+|.||+|+|. .|..
T Consensus 216 ~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~-~p~~ 252 (332)
T 3lzw_A 216 IGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGF-VSSL 252 (332)
T ss_dssp ECSSSCCEEEEEETTSCCEEEEECSEEEECCCE-ECCC
T ss_pred ecCCceEEEEEEecCCCceEEEECCEEEEeecc-CCCc
Confidence 133333 23589999999998 4544
No 254
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.35 E-value=0.00086 Score=63.82 Aligned_cols=79 Identities=11% Similarity=-0.042 Sum_probs=54.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCe-EEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCe-EE
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQ-VDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNV-TL 95 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~-v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~-~v 95 (334)
..++|+|||+|++|+.+|..|.+.+ .+ |+++++.+.. +...+|.+.... .+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~--~~~V~l~~r~~~~-------------------------l~~~~i~~~~~v~~~ 263 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVA--KHPIYQSLLGGGD-------------------------IQNESLQQVPEITKF 263 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTS--CSSEEEECTTCCS-------------------------CBCSSEEEECCEEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHh--CCcEEEEeCCCCc-------------------------CCCCCeEEecCeEEE
Confidence 4689999999999999999999987 77 9999987543 122334332111 11
Q ss_pred ---ceEEecccce--eccCeEEEeccCCCCCCCC
Q 019876 96 ---GSSVSLSELR--QLYHVVVLAYGAESDRALG 124 (334)
Q Consensus 96 ---~~~v~~~~~~--~~yd~lIlATGs~~p~~~~ 124 (334)
+..+.+.+++ ..+|.||+|||. .|..+-
T Consensus 264 ~~~~~~v~~~dG~~~~~~D~vi~atG~-~~~~~~ 296 (447)
T 2gv8_A 264 DPTTREIYLKGGKVLSNIDRVIYCTGY-LYSVPF 296 (447)
T ss_dssp ETTTTEEEETTTEEECCCSEEEECCCB-CCCCCC
T ss_pred ecCCCEEEECCCCEeccCCEEEECCCC-CcCCCC
Confidence 1234555554 479999999998 465433
No 255
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.32 E-value=0.00085 Score=60.18 Aligned_cols=36 Identities=28% Similarity=0.248 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++++|||+|+.|+.+|..|++.+ .+|+|+++.+.
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G--~~Vt~v~~~~~ 186 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYG--SKVIILHRRDA 186 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTS--SEEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhC--Ceeeeeccccc
Confidence 3579999999999999999999997 99999997643
No 256
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.31 E-value=0.00017 Score=73.56 Aligned_cols=39 Identities=23% Similarity=0.376 Sum_probs=35.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
..++|+|||||++|+++|..|.+.| .+|+|+|+.+.+||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g--~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFG--IKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CcEEEEecccceec
Confidence 4579999999999999999999997 99999999888776
No 257
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.31 E-value=0.00014 Score=71.71 Aligned_cols=40 Identities=20% Similarity=0.211 Sum_probs=35.1
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFG 58 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg 58 (334)
....+|+|||||++|+.+|..|++.| .+|+|+|+.+..+|
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G--~~V~LlEk~d~~~G 55 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRG--IQTGLVEMNDFASG 55 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTT--CCEEEEESSSTTCS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCC--CcEEEEECCCCCCC
Confidence 34689999999999999999999997 99999999865443
No 258
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.31 E-value=0.00023 Score=66.52 Aligned_cols=34 Identities=35% Similarity=0.376 Sum_probs=31.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
+++|+|||||+||+.||..|++.| .+|+|+|+++
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G--~~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLG--VPVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCC--CcEEEEeccC
Confidence 368999999999999999999997 9999999876
No 259
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.30 E-value=0.00017 Score=70.71 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=32.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
.++|+||||||+|+++|..|++.| .+|+|||+.+.+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G--~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQ--VGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--CCEEEEeCCCCC
Confidence 368999999999999999999997 999999998654
No 260
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.29 E-value=0.00017 Score=70.77 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=33.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPF 57 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~g 57 (334)
...+|+|||||+||++||..|++ + .+|+|+|+.+..+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G--~~V~vlEk~~~~~ 43 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-Q--HQVIVLSKGPVTE 43 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-T--SCEEEECSSCTTC
T ss_pred CCCCEEEECccHHHHHHHHHHhc-C--CcEEEEECCCCCC
Confidence 34799999999999999999999 7 9999999987654
No 261
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.27 E-value=0.00095 Score=64.00 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=54.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeE-E-
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT-L- 95 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~-v- 95 (334)
..++|+|||+|++|+.+|..|.+.+ .+|+++++.+.+.+.. . | .+|+++.... +
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g--~~V~li~~~~~~~~~~---~-~------------------~~V~~~~~V~~i~ 251 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYG--AKKLISCYRTAPMGYK---W-P------------------ENWDERPNLVRVD 251 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTT--CSEEEEECSSCCCCCC---C-C------------------TTEEECSCEEEEC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhC--CeEEEEEECCCCCCCC---C-C------------------CceEEcCCeEEEe
Confidence 4689999999999999999999997 8999999876532110 0 1 2444431110 1
Q ss_pred ceEEecccce-eccCeEEEeccCCCCCCC
Q 019876 96 GSSVSLSELR-QLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 96 ~~~v~~~~~~-~~yd~lIlATGs~~p~~~ 123 (334)
+..+.+.+++ +.+|.||+|||. .|..+
T Consensus 252 ~~~V~~~dG~~i~~D~Vi~atG~-~p~~~ 279 (464)
T 2xve_A 252 TENAYFADGSSEKVDAIILCTGY-IHHFP 279 (464)
T ss_dssp SSEEEETTSCEEECSEEEECCCB-CCCCT
T ss_pred CCEEEECCCCEEeCCEEEECCCC-CCCCC
Confidence 1234444443 589999999998 46543
No 262
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.27 E-value=0.00091 Score=67.21 Aligned_cols=95 Identities=16% Similarity=0.145 Sum_probs=60.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCC-----------------------------------CeEEEEcCCCCCccccc
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQE-----------------------------------AQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~-----------------------------------~~v~vie~~~~~gg~~~ 61 (334)
...++|+|||+|+.|+.+|..|.+.+.. .+|+++++.+..-+
T Consensus 492 ~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~--- 568 (671)
T 1ps9_A 492 PVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPG--- 568 (671)
T ss_dssp CCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTT---
T ss_pred CCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhc---
Confidence 3468999999999999999999987511 24455554332100
Q ss_pred cccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce----EEec-ccc---eeccCeEEEeccCCCCC
Q 019876 62 SGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS----SVSL-SEL---RQLYHVVVLAYGAESDR 121 (334)
Q Consensus 62 ~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~----~v~~-~~~---~~~yd~lIlATGs~~p~ 121 (334)
.. ........+.+.+++.||+++.++.+.. .+.+ .++ .+++|.||+|+|. .|.
T Consensus 569 ----~~--l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~-~p~ 629 (671)
T 1ps9_A 569 ----QG--LGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQ-EPN 629 (671)
T ss_dssp ----TT--SCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCE-EEC
T ss_pred ----cc--cccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCc-ccc
Confidence 00 0112333455667788999999876531 1222 233 4689999999998 454
No 263
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.25 E-value=0.00019 Score=69.59 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhh---cCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK---AHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~---~~~~~~v~vie~~~ 54 (334)
.++|+|||||++|+++|..|++ .+ .+|+|||+.+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G--~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDR--IDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGG--SEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCC--CEEEEEecCC
Confidence 3699999999999999999999 76 9999999874
No 264
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.25 E-value=0.00024 Score=68.37 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=37.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++|+|||+|.+|+.+|..|.+.| .+|+++|+++.+||.+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g--~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYG--KKILVLDRNPYYGGETA 60 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCC--CcEEEEeccCCCCCCcc
Confidence 4579999999999999999999997 99999999998888653
No 265
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.23 E-value=0.0013 Score=64.29 Aligned_cols=37 Identities=22% Similarity=0.305 Sum_probs=33.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
...++|+|||+|..|+.+|..|++.+ .+|+++++.+.
T Consensus 176 ~~~krV~VIG~G~sgve~a~~l~~~~--~~Vtv~~r~~~ 212 (540)
T 3gwf_A 176 LAGRRVGVIGTGSTGQQVITSLAPEV--EHLTVFVRTPQ 212 (540)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHTTTC--SEEEEEESSCC
T ss_pred cccceEEEECCCchHHHHHHHHHhhC--CEEEEEECCCC
Confidence 35689999999999999999999986 89999999865
No 266
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.22 E-value=0.00025 Score=68.76 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=32.6
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+|+|||||++|+++|..|++.| .+|+|+|+.+..
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G--~~V~llE~~~~~ 38 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRG--LSVLMLEAQDLA 38 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhCC--CCEEEEECCCCC
Confidence 469999999999999999999997 999999997643
No 267
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.20 E-value=0.0014 Score=59.00 Aligned_cols=36 Identities=22% Similarity=0.281 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||||+.|+.+|..|++.+ .+|+|+++.+.
T Consensus 144 ~~k~vvViGgG~ig~E~A~~l~~~g--~~Vtlv~~~~~ 179 (312)
T 4gcm_A 144 KNKRLFVIGGGDSAVEEGTFLTKFA--DKVTIVHRRDE 179 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTC--SEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CEEEEEecccc
Confidence 3579999999999999999999987 89999998765
No 268
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.18 E-value=0.0015 Score=63.62 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=60.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhc-CCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQH-ERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~-~~i~~~~~~~v~ 96 (334)
..++|+|||+|+.|+.+|..|++.+ .+|+++++.+.+. ++ ..+.+.+.+ .||+++.+..+.
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g--~~Vtlv~~~~~l~--------~~--------~~l~~~l~~~~gV~v~~~~~v~ 415 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIV--EHVTLLEFAPEMK--------AD--------QVLQDKVRSLKNVDIILNAQTT 415 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHB--SEEEEECSSSSCC--------SC--------HHHHHHHTTCTTEEEECSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhC--CEEEEEEeCcccC--------cC--------HHHHHHHhcCCCcEEEeCCEEE
Confidence 3579999999999999999999987 8999999876531 11 123344455 589998886652
Q ss_pred e---------EEeccc---c---eeccCeEEEeccCCCCCC
Q 019876 97 S---------SVSLSE---L---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 97 ~---------~v~~~~---~---~~~yd~lIlATGs~~p~~ 122 (334)
. .+.+.+ + .+.+|.||+|+|. .|..
T Consensus 416 ~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~-~pn~ 455 (521)
T 1hyu_A 416 EVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL-LPNT 455 (521)
T ss_dssp EEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE-EESC
T ss_pred EEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC-CCCc
Confidence 1 122221 2 3579999999997 4554
No 269
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.18 E-value=0.00015 Score=72.79 Aligned_cols=35 Identities=37% Similarity=0.533 Sum_probs=31.7
Q ss_pred CCeEEEECCchHHHHHHHHHhh-----cCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK-----AHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~-----~~~~~~v~vie~~~~ 55 (334)
..+|+||||||+|+++|..|++ .| ++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~G--i~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPD--LKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTT--CCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCC--CCEEEEeCCCC
Confidence 4689999999999999999999 76 99999998753
No 270
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.18 E-value=0.00027 Score=70.73 Aligned_cols=36 Identities=28% Similarity=0.490 Sum_probs=32.4
Q ss_pred CCeEEEECCchHHHHHHHHHhh-cCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLK-AHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~-~~~~~~v~vie~~~~~ 56 (334)
..+|+||||||+|+++|..|++ .| ++|+|||+.+.+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G--~~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPD--IRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTT--SCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCC--CCEEEEeCCCCC
Confidence 4689999999999999999999 87 999999997653
No 271
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.18 E-value=0.00031 Score=70.02 Aligned_cols=40 Identities=33% Similarity=0.382 Sum_probs=35.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCcccc
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLV 60 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~ 60 (334)
.++|+|||+|++|+.+|..|++.+ ++|+|+|+.+..+|..
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G--~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAG--YKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCC--CcEEEEeccCCCCCcc
Confidence 468999999999999999999987 9999999998777643
No 272
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.16 E-value=0.00062 Score=64.45 Aligned_cols=98 Identities=9% Similarity=0.115 Sum_probs=62.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccc----------------------
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQ---------------------- 216 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~---------------------- 216 (334)
..+|+|||||..|+-+|..|++ .|. +|+|+++.+.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~--------------------~G~-~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~ 85 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGK--------------------RGR-RVLVIDHARAPGEKIRISGGGRCNFTNIHASPRN 85 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH--------------------CCC-cEEEEeCCCCCCceeEEcCCCceeccCCCCCHHH
Confidence 3589999999999999999996 576 599999876421
Q ss_pred -------------cCCCHHHHHHHHcCCceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEE
Q 019876 217 -------------AACTAKELREILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQREL 283 (334)
Q Consensus 217 -------------~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 283 (334)
..|....+.+.++..|+.+........+.... ...+.+.|.+.+. +.||
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~---------~~~l~~~L~~~l~---------~~Gv 147 (417)
T 3v76_A 86 FLSGNPHFCKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHS---------AKDIIRMLMAEMK---------EAGV 147 (417)
T ss_dssp EEESSTTTTHHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSC---------HHHHHHHHHHHHH---------HHTC
T ss_pred HhhcCHHHHHHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCC---------HHHHHHHHHHHHH---------HCCC
Confidence 11233455556666676665543322111100 1122334444442 4589
Q ss_pred EEEeccccceee
Q 019876 284 HFVFFRKPDSFL 295 (334)
Q Consensus 284 ~~~~~~~~~~i~ 295 (334)
++++++.+++|.
T Consensus 148 ~i~~~~~V~~i~ 159 (417)
T 3v76_A 148 QLRLETSIGEVE 159 (417)
T ss_dssp EEECSCCEEEEE
T ss_pred EEEECCEEEEEE
Confidence 999999999997
No 273
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.15 E-value=0.0013 Score=58.72 Aligned_cols=109 Identities=10% Similarity=0.127 Sum_probs=62.5
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC-CcceEEEEeecCccccCCCH-----------HHHHHH
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS-SIRKVYLVGRRGPVQAACTA-----------KELREI 227 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~Vtiv~r~~~~~~~~~~-----------~~~~~~ 227 (334)
..|+|||||.+|+.+|..|++ . |. +|+|+++...+...... ....+.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~--------------------~~G~-~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~ 98 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISK--------------------NPNV-QVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLF 98 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--------------------STTS-CEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHH
T ss_pred cCEEEECccHHHHHHHHHHHH--------------------cCCC-eEEEEECCCCCCCceecCCcchHHHHcCcHHHHH
Confidence 479999999999999999996 5 65 59999998654211000 001122
Q ss_pred HcCCceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCCCCeeEE
Q 019876 228 LGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERSGHVSGV 307 (334)
Q Consensus 228 l~~~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~~v~~v 307 (334)
+...|+.+....... .. .....+...+.+.+. ...||++++++.+++|. . +++++.+|
T Consensus 99 l~~~G~~~~~~~~~~---~~--------~~~~~~~~~l~~~~~--------~~~gv~i~~~~~V~~i~--~-~~~~v~gv 156 (284)
T 1rp0_A 99 LDEIGVAYDEQDTYV---VV--------KHAALFTSTIMSKLL--------ARPNVKLFNAVAAEDLI--V-KGNRVGGV 156 (284)
T ss_dssp HHHHTCCCEECSSEE---EE--------SCHHHHHHHHHHHHH--------TSTTEEEEETEEEEEEE--E-ETTEEEEE
T ss_pred HHHcCCCcccCCCEE---Ee--------cCHHHHHHHHHHHHH--------hcCCCEEEcCcEEEEEE--e-cCCeEEEE
Confidence 222344332211000 00 001112223333332 24699999999999997 4 35678888
Q ss_pred EEEE
Q 019876 308 HFEK 311 (334)
Q Consensus 308 ~~~~ 311 (334)
.+..
T Consensus 157 ~~~~ 160 (284)
T 1rp0_A 157 VTNW 160 (284)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7753
No 274
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.14 E-value=0.0015 Score=62.52 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=32.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPT 55 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~ 55 (334)
...++|+|||+|..|+.+|..+.+.+ . +|+++++.+.
T Consensus 262 ~~gk~VvVIGgG~~a~d~A~~~~r~G--a~~Vtiv~r~~~ 299 (456)
T 2vdc_G 262 AAGKHVVVLGGGDTAMDCVRTAIRQG--ATSVKCLYRRDR 299 (456)
T ss_dssp CCCSEEEEECSSHHHHHHHHHHHHTT--CSEEEEECSSCS
T ss_pred cCCCEEEEECCChhHHHHHHHHHHcC--CCEEEEEEeCCc
Confidence 35689999999999999999999986 5 5999998764
No 275
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.12 E-value=0.00089 Score=67.95 Aligned_cols=92 Identities=15% Similarity=0.124 Sum_probs=63.1
Q ss_pred CCCeEEEEC--CchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 18 NPLRVCVVG--SGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 18 ~~~~vvIIG--aG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
..++|+||| +|+.|+.+|..|++.+ .+|+++++.+ +..... . +. . ...+.+.+++.||+++.++.+
T Consensus 527 ~gk~VvVIG~GgG~~g~e~A~~l~~~G--~~Vtlv~~~~-l~~~~~--~-~~-----~-~~~~~~~l~~~GV~i~~~~~v 594 (729)
T 1o94_A 527 IGKRVVILNADTYFMAPSLAEKLATAG--HEVTIVSGVH-LANYMH--F-TL-----E-YPNMMRRLHELHVEELGDHFC 594 (729)
T ss_dssp CCSEEEEEECCCSSHHHHHHHHHHHTT--CEEEEEESSC-TTHHHH--H-TT-----C-HHHHHHHHHHTTCEEECSEEE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC--CEEEEEeccc-cccccc--c-cc-----c-HHHHHHHHHhCCCEEEcCcEE
Confidence 467999999 9999999999999997 8999999876 421110 1 11 1 234455667789999988765
Q ss_pred ce----EEec----cc--ce------------------eccCeEEEeccCCCCCC
Q 019876 96 GS----SVSL----SE--LR------------------QLYHVVVLAYGAESDRA 122 (334)
Q Consensus 96 ~~----~v~~----~~--~~------------------~~yd~lIlATGs~~p~~ 122 (334)
.. .+.+ .+ .. +++|.||+|+|. .|..
T Consensus 595 ~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~-~p~~ 648 (729)
T 1o94_A 595 SRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGR-HSEC 648 (729)
T ss_dssp EEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCE-EECC
T ss_pred EEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCC-CCCh
Confidence 21 1111 11 11 689999999998 4543
No 276
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.11 E-value=0.00034 Score=69.30 Aligned_cols=36 Identities=17% Similarity=0.335 Sum_probs=32.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+|+|||||+||++||..|++.+ .+|+|+|+.+..
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G--~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSG--QTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCC--CcEEEEecCCCC
Confidence 468999999999999999999987 999999998654
No 277
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.10 E-value=0.0004 Score=68.09 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=30.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..+|+|||+|.+|+-+|..|++ .|. +|+|+++...
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~--------------------~G~-kV~VlEr~~~ 141 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQ--------------------MGF-NPIIVERGKE 141 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHH--------------------TTC-CCEEECSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHH--------------------CCC-eEEEEEccCc
Confidence 4689999999999999999996 676 5999998754
No 278
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.06 E-value=0.0022 Score=62.85 Aligned_cols=36 Identities=22% Similarity=0.338 Sum_probs=33.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||+|+.|+.+|..|++.+ .+|++|++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~--~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQA--EQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHB--SEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhC--CEEEEEECCCC
Confidence 5689999999999999999999987 89999999875
No 279
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.06 E-value=0.00047 Score=68.02 Aligned_cols=37 Identities=16% Similarity=0.250 Sum_probs=33.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..++|+|||||.+|+++|..|++.| .+|+|+|+.+..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG--~~V~LlE~~~~~ 67 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASG--IKTGLIEMQDFA 67 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CcEEEEeCCCCC
Confidence 4579999999999999999999997 999999998643
No 280
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.05 E-value=0.0032 Score=61.62 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=32.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|+|||+|+.|+.+|..|++.+ .+|+||++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~--~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETA--KELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTB--SEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhC--CEEEEEEcCCC
Confidence 5689999999999999999999986 89999999875
No 281
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.04 E-value=0.00043 Score=68.92 Aligned_cols=35 Identities=26% Similarity=0.286 Sum_probs=32.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..+|+|||||+||++||..|++.| .+|+|+|+.+.
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G--~~V~vlEK~~~ 52 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAG--FNTACVTKLFP 52 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCC--CcEEEEeccCC
Confidence 469999999999999999999987 99999999754
No 282
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.03 E-value=0.00074 Score=64.39 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=29.0
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..|+|||||.+|+-+|..|++ .|. +|+|+++.+.
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~--------------------~G~-~V~llEk~~~ 60 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAE--------------------EGA-NVLLLDKGNK 60 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHH--------------------CCC-CEEEEECCCC
Confidence 479999999999999999996 565 5999998753
No 283
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.00 E-value=0.0019 Score=62.66 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+|+|||||..|+-+|..|++ .|. +|+|+++..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~--------------------~G~-~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAM--------------------RGH-RVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--------------------TTC-CEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHh--------------------CCC-CEEEEccCC
Confidence 479999999999999999996 676 599999986
No 284
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.98 E-value=0.0005 Score=68.92 Aligned_cols=36 Identities=22% Similarity=0.280 Sum_probs=32.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+|+|||||.||++||..|++.| .+|+|+|+.+..
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G--~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKG--LSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTT--CCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCC--CcEEEEeccCCC
Confidence 468999999999999999999987 999999997643
No 285
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.97 E-value=0.00093 Score=53.02 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=49.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
...+|+|+|+|..|...|..|.+.+ ++|+++|+++. .... +...++.++.+.....
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~------------------~~~~----~~~~g~~~i~gd~~~~ 61 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRT------------------RVDE----LRERGVRAVLGNAANE 61 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHH------------------HHHH----HHHTTCEEEESCTTSH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHH------------------HHHH----HHHcCCCEEECCCCCH
Confidence 3568999999999999999999987 99999998631 1111 2234666544322111
Q ss_pred EEeccc-ceeccCeEEEeccC
Q 019876 98 SVSLSE-LRQLYHVVVLAYGA 117 (334)
Q Consensus 98 ~v~~~~-~~~~yd~lIlATGs 117 (334)
.+ +.. .-..+|.+|+|++.
T Consensus 62 ~~-l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 62 EI-MQLAHLECAKWLILTIPN 81 (140)
T ss_dssp HH-HHHTTGGGCSEEEECCSC
T ss_pred HH-HHhcCcccCCEEEEECCC
Confidence 11 111 12378999999987
No 286
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.95 E-value=0.0015 Score=59.43 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=29.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|+|||+|+.|+.+|..|.+.+ +|+++.+.+
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~---~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA---ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS---EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC---CEEEEECCC
Confidence 4589999999999999999999985 699998763
No 287
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=96.93 E-value=0.00048 Score=65.43 Aligned_cols=35 Identities=23% Similarity=0.182 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||||++|+++|..|++.++ .+|+|+|++
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~-~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSG-GSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHC-SCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC-CcEEEEccC
Confidence 34699999999999999999999852 699999993
No 288
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.92 E-value=0.00049 Score=69.31 Aligned_cols=39 Identities=21% Similarity=0.319 Sum_probs=33.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCC------CCeEEEEcCCC-CC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQ------EAQVDIIDRLP-TP 56 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~------~~~v~vie~~~-~~ 56 (334)
..++|+|||||++|++||..|.+.+. +.+|+|||+++ .+
T Consensus 55 ~~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 55 GNYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 35789999999999999999998751 27999999998 87
No 289
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.89 E-value=0.0014 Score=68.58 Aligned_cols=82 Identities=12% Similarity=0.110 Sum_probs=60.2
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce-
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS- 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~- 97 (334)
.++|+|||+|+.|+.+|..|++.+ .+|+|+++.+.+. + . .+.+++.||+++++..+..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G--~~Vtvv~~~~~~~--------~------~-----~~~l~~~GV~v~~~~~v~~i 342 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATG--GVVAVIDARSSIS--------A------A-----AAQAVADGVQVISGSVVVDT 342 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGT--CCSEEEESCSSCC--------H------H-----HHHHHHTTCCEEETEEEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcC--CcEEEEECCCccc--------h------h-----HHHHHhCCeEEEeCCEeEEE
Confidence 479999999999999999999997 7899999876431 1 1 2345677999988875421
Q ss_pred ---------EEeccc-------c---eeccCeEEEeccCCCCCC
Q 019876 98 ---------SVSLSE-------L---RQLYHVVVLAYGAESDRA 122 (334)
Q Consensus 98 ---------~v~~~~-------~---~~~yd~lIlATGs~~p~~ 122 (334)
.+.+.+ + .+.+|.||+|+|. .|..
T Consensus 343 ~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~-~P~~ 385 (965)
T 2gag_A 343 EADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF-NPVV 385 (965)
T ss_dssp EECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE-EECC
T ss_pred eccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc-CcCh
Confidence 233322 2 3589999999997 4653
No 290
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.88 E-value=0.0023 Score=55.21 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=28.5
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeec
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~ 212 (334)
-+|+|||||.+|+++|..|++ .|. +|+++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~--------------------~g~-~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQ--------------------KGV-RVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEecC
Confidence 469999999999999999996 676 59999987
No 291
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.86 E-value=0.0013 Score=62.92 Aligned_cols=74 Identities=19% Similarity=0.119 Sum_probs=53.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|.|||.|.+|+++|..|.++| ++|+++|..+.. . + ...+.++..|++++.+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--~~V~~~D~~~~~-------~-~----------~~~~~L~~~gi~~~~g~~~-- 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--AIVTVNDGKPFD-------E-N----------PTAQSLLEEGIKVVCGSHP-- 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--CEEEEEESSCGG-------G-C----------HHHHHHHHTTCEEEESCCC--
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--CEEEEEeCCccc-------C-C----------hHHHHHHhCCCEEEECCCh--
Confidence 4689999999999999999999997 999999986420 0 1 1223455668988765431
Q ss_pred EEecccceec-cCeEEEeccC
Q 019876 98 SVSLSELRQL-YHVVVLAYGA 117 (334)
Q Consensus 98 ~v~~~~~~~~-yd~lIlATGs 117 (334)
.+.... +|.||+++|.
T Consensus 66 ----~~~~~~~~d~vv~spgi 82 (451)
T 3lk7_A 66 ----LELLDEDFCYMIKNPGI 82 (451)
T ss_dssp ----GGGGGSCEEEEEECTTS
T ss_pred ----HHhhcCCCCEEEECCcC
Confidence 111123 8999999998
No 292
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.80 E-value=0.00097 Score=66.87 Aligned_cols=37 Identities=19% Similarity=0.300 Sum_probs=31.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhc----CCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKA----HQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~----~~~~~v~vie~~~~ 55 (334)
..+|+|||||.||++||..|++. +|+.+|+|+|+.+.
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 46899999999999999999987 12399999999753
No 293
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.78 E-value=0.0011 Score=66.35 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=31.3
Q ss_pred CCeEEEECCchHHHHHHHHHh---h-cCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTL---K-AHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~---~-~~~~~~v~vie~~~~ 55 (334)
..+|+|||||+||++||..|+ + .+ .+|+|+|+.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G--~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGG--LKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTT--CCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCC--CeEEEEeCcCC
Confidence 468999999999999999999 5 66 89999999864
No 294
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.70 E-value=0.004 Score=59.01 Aligned_cols=91 Identities=11% Similarity=0.041 Sum_probs=57.6
Q ss_pred CeEEEECCchHH------HHHH----HHHhhcCC--CCe-EEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCC
Q 019876 20 LRVCVVGSGPAG------FYTA----EKTLKAHQ--EAQ-VDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHER 86 (334)
Q Consensus 20 ~~vvIIGaG~aG------l~aA----~~l~~~~~--~~~-v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 86 (334)
.+++|||+|+.| +..| ..+++.+. ..+ |+++++.+.++... . +.. .+....+.+.+++.|
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~---l-~~~---~~~~~~~~~~l~~~g 222 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLG---I-QGV---GDSKGILTKGLKEEG 222 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTT---T-TCC---TTHHHHHHHHHHHTT
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccc---c-Ccc---hHHHHHHHHHHHHCC
Confidence 457899997653 5555 66666651 123 99999987654321 1 222 124456667778889
Q ss_pred cEEEeCeEEce----EEecc----------cceeccCeEEEeccC
Q 019876 87 CSFFGNVTLGS----SVSLS----------ELRQLYHVVVLAYGA 117 (334)
Q Consensus 87 i~~~~~~~v~~----~v~~~----------~~~~~yd~lIlATGs 117 (334)
|+++.+..+.. .+.+. ..++.||.+++|+|.
T Consensus 223 I~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 223 IEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp CEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred CEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 99999876631 12222 223589999999996
No 295
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.67 E-value=0.0017 Score=61.90 Aligned_cols=76 Identities=17% Similarity=0.133 Sum_probs=53.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||.|.+|+++|..|.++| ++|+++|..... |.. ..++ .|+++..+...
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G--~~v~~~D~~~~~---------~~~-----------~~l~-~G~~~~~g~~~-- 58 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARG--VTPRVMDTRMTP---------PGL-----------DKLP-EAVERHTGSLN-- 58 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTT--CCCEEEESSSSC---------TTG-----------GGSC-TTSCEEESSCC--
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCC--CEEEEEECCCCc---------chh-----------HHhh-CCCEEEECCCc--
Confidence 3578999999999999999999987 999999987532 211 2345 68877655421
Q ss_pred EEecccceeccCeEEEeccCCCCCCC
Q 019876 98 SVSLSELRQLYHVVVLAYGAESDRAL 123 (334)
Q Consensus 98 ~v~~~~~~~~yd~lIlATGs~~p~~~ 123 (334)
.+... .+|.||+++|. .+..|
T Consensus 59 ---~~~~~-~~d~vV~s~gi-~~~~p 79 (439)
T 2x5o_A 59 ---DEWLM-AADLIVASPGI-ALAHP 79 (439)
T ss_dssp ---HHHHH-TCSEEEECTTS-CTTCH
T ss_pred ---HHHhc-cCCEEEeCCCC-CCCCH
Confidence 11122 68999999997 34433
No 296
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.62 E-value=0.0049 Score=58.24 Aligned_cols=92 Identities=11% Similarity=0.035 Sum_probs=59.2
Q ss_pred CeEEEECCchHH------HHHH----HHHhhcC--CCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCc
Q 019876 20 LRVCVVGSGPAG------FYTA----EKTLKAH--QEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERC 87 (334)
Q Consensus 20 ~~vvIIGaG~aG------l~aA----~~l~~~~--~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i 87 (334)
.+++|||+|+.| +..| ..+++.+ ...+|+++++.+.++.... +.. .+....+.+.+++.||
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~~l----~~~---~~~~~~l~~~l~~~GV 215 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHFGV----GGI---GASKRLVEDLFAERNI 215 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCTTT----TCS---TTHHHHHHHHHHHTTC
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccccccc----Ccc---hHHHHHHHHHHHHCCC
Confidence 357899998754 5555 5555554 1268999998876542211 111 1244566677888899
Q ss_pred EEEeCeEEce----EEeccc-----ceeccCeEEEeccCC
Q 019876 88 SFFGNVTLGS----SVSLSE-----LRQLYHVVVLAYGAE 118 (334)
Q Consensus 88 ~~~~~~~v~~----~v~~~~-----~~~~yd~lIlATGs~ 118 (334)
++++++.+.. .+.+.+ .++++|.+|+|+|..
T Consensus 216 ~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 216 DWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp EEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred EEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCc
Confidence 9999877632 233332 346899999999973
No 297
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.61 E-value=0.0032 Score=59.15 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=29.2
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
-+|+|||||.+|+.+|..|++ .|. +|+|+++.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~--------------------~G~-~V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAK--------------------LGK-SVTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh--------------------CCC-CEEEEeCCCC
Confidence 369999999999999999996 676 5999998764
No 298
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.58 E-value=0.011 Score=56.39 Aligned_cols=38 Identities=24% Similarity=0.288 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhc-------------------CCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKA-------------------HQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~-------------------~~~~~v~vie~~~~ 55 (334)
..++|+|||+|+.|+.+|..|.+. ....+|+|+++.+.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 468999999999999999999874 11249999998764
No 299
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.57 E-value=0.0045 Score=53.30 Aligned_cols=72 Identities=14% Similarity=0.088 Sum_probs=50.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..++|+|||||..|...+..|.+.| .+|+|++++.. .+ +..+.+..++.++...
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~G--A~VtVvap~~~----------------~~----l~~l~~~~~i~~i~~~---- 83 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEG--AAITVVAPTVS----------------AE----INEWEAKGQLRVKRKK---- 83 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGC--CCEEEECSSCC----------------HH----HHHHHHTTSCEEECSC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEECCCCC----------------HH----HHHHHHcCCcEEEECC----
Confidence 5689999999999999999999997 99999987421 11 2333344556664322
Q ss_pred EEecccceeccCeEEEeccC
Q 019876 98 SVSLSELRQLYHVVVLAYGA 117 (334)
Q Consensus 98 ~v~~~~~~~~yd~lIlATGs 117 (334)
....+ -..+|.||.|||.
T Consensus 84 -~~~~d-L~~adLVIaAT~d 101 (223)
T 3dfz_A 84 -VGEED-LLNVFFIVVATND 101 (223)
T ss_dssp -CCGGG-SSSCSEEEECCCC
T ss_pred -CCHhH-hCCCCEEEECCCC
Confidence 11111 1368999999997
No 300
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.57 E-value=0.0075 Score=63.52 Aligned_cols=84 Identities=23% Similarity=0.309 Sum_probs=56.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEce
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGS 97 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~ 97 (334)
..+|+|||||..|+.+|..+++.+ . +|+++++.+.. ..|.. ..++ ..+++.|++++.+..+..
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G--~~~Vtvv~r~~~~-------~~~~~--~~e~-----~~~~~~Gv~~~~~~~~~~ 395 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCG--ARRVFLVFRKGFV-------NIRAV--PEEV-----ELAKEEKCEFLPFLSPRK 395 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTT--CSEEEEECSSCGG-------GCCSC--HHHH-----HHHHHTTCEEECSEEEEE
T ss_pred CCcEEEECCChHHHHHHHHHHHcC--CCEEEEEEecChh-------hCCCC--HHHH-----HHHHHcCCEEEeCCCceE
Confidence 469999999999999999999986 5 89999987521 11322 1222 234566888876654311
Q ss_pred ------E---Eecc--------------c--ceeccCeEEEeccCC
Q 019876 98 ------S---VSLS--------------E--LRQLYHVVVLAYGAE 118 (334)
Q Consensus 98 ------~---v~~~--------------~--~~~~yd~lIlATGs~ 118 (334)
. +.+. + ..+++|.||+|+|..
T Consensus 396 i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 396 VIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp EEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred EEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 1 1110 1 135899999999983
No 301
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.57 E-value=0.0013 Score=56.16 Aligned_cols=32 Identities=25% Similarity=0.476 Sum_probs=29.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
|+|+|+|+|..|...|..|.+.+ .+|+++|++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g--~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK--YGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT--CCEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 58999999999999999999987 999999976
No 302
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.57 E-value=0.0039 Score=50.04 Aligned_cols=78 Identities=15% Similarity=0.119 Sum_probs=49.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEceE
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLGSS 98 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~~~ 98 (334)
.++|+|+|+|..|...|..|.+.+ .+|+++++++. +....+...+ ..++.++.+......
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g--~~V~vid~~~~-----------------~~~~~~~~~~-~~~~~~i~gd~~~~~ 62 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRG--QNVTVISNLPE-----------------DDIKQLEQRL-GDNADVIPGDSNDSS 62 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTT--CCEEEEECCCH-----------------HHHHHHHHHH-CTTCEEEESCTTSHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CCEEEEECCCh-----------------HHHHHHHHhh-cCCCeEEEcCCCCHH
Confidence 468999999999999999999987 99999998631 1111222222 235666544321111
Q ss_pred Eecccc-eeccCeEEEeccC
Q 019876 99 VSLSEL-RQLYHVVVLAYGA 117 (334)
Q Consensus 99 v~~~~~-~~~yd~lIlATGs 117 (334)
.+... -..+|.||+||+.
T Consensus 63 -~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 63 -VLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp -HHHHHTTTTCSEEEECSSC
T ss_pred -HHHHcChhhCCEEEEecCC
Confidence 11111 2368999999986
No 303
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.56 E-value=0.002 Score=50.87 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
+++|+|+|+|..|...|..|.+.+ ++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g--~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAG--KKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECC
Confidence 468999999999999999999987 999999975
No 304
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.55 E-value=0.0098 Score=56.87 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=30.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhh--------------------cCCCC-eEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLK--------------------AHQEA-QVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~--------------------~~~~~-~v~vie~~~~ 55 (334)
..++|+|||+|..|+.+|..|.+ .+ . +|+|+++.+.
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g--~~~V~lv~r~~~ 200 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSR--VKTVWIVGRRGP 200 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCC--CCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCC--CcEEEEEEcCCh
Confidence 46899999999999999999983 43 5 7999998764
No 305
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.42 E-value=0.0082 Score=55.48 Aligned_cols=35 Identities=17% Similarity=0.337 Sum_probs=30.3
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
-.|+|||||.+|+-+|..|++ .|. +|+|+++....
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~--------------------~G~-~V~l~E~~~~~ 39 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAK--------------------YGL-KTLMIEKRPEI 39 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCCC
Confidence 379999999999999999996 676 59999998743
No 306
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.36 E-value=0.011 Score=57.99 Aligned_cols=36 Identities=25% Similarity=0.346 Sum_probs=30.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
...|+|||+|..|+.+|..|++ .|. +|+|+++.+.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~--------------------~G~-~V~vlEk~~~~ 161 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATD--------------------SGA-KVILIEKEPVI 161 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEeCCCCC
Confidence 3579999999999999999996 676 59999987543
No 307
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.36 E-value=0.012 Score=54.95 Aligned_cols=88 Identities=10% Similarity=0.008 Sum_probs=59.8
Q ss_pred CeEEEECCc-------------------h------HHHHHHH----HHhhcC--CCCeEEEEcCCCCCccccccccCCCC
Q 019876 20 LRVCVVGSG-------------------P------AGFYTAE----KTLKAH--QEAQVDIIDRLPTPFGLVRSGVAPDH 68 (334)
Q Consensus 20 ~~vvIIGaG-------------------~------aGl~aA~----~l~~~~--~~~~v~vie~~~~~gg~~~~~~~p~~ 68 (334)
.+++|||+| + +|+..|. .+++.+ ++.+|+++++.+.+ |.+
T Consensus 146 ~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~~l---------~~~ 216 (409)
T 3h8l_A 146 GGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYL---------SDL 216 (409)
T ss_dssp SEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSSSSS---------TTB
T ss_pred CCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCCccc---------ccc
Confidence 577899999 2 4666664 455554 23589999987521 211
Q ss_pred cchhHHHHHHHHHhhcCCcEEEeCeEEc----eEEecccc-eeccCeEEEeccCC
Q 019876 69 PETKIVINQFSRVVQHERCSFFGNVTLG----SSVSLSEL-RQLYHVVVLAYGAE 118 (334)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~i~~~~~~~v~----~~v~~~~~-~~~yd~lIlATGs~ 118 (334)
...+...+.+.+++.||++++++.+. ..+.+.++ ++++|.||+|+|..
T Consensus 217 --~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 217 --SPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp --CHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEE
T ss_pred --CHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCC
Confidence 24566677788888899999887652 23445444 46899999999983
No 308
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.34 E-value=0.0029 Score=61.89 Aligned_cols=36 Identities=28% Similarity=0.521 Sum_probs=32.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++++|||+|++|+.+|..|.+.+ .+|+|+|+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g--~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAG--KKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCC--CeEEEEeCCCC
Confidence 4579999999999999999999986 99999999764
No 309
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.28 E-value=0.0021 Score=62.82 Aligned_cols=36 Identities=22% Similarity=0.347 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+++||||+|+||+.+|..|.+ + .+|.|+|+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g--~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-K--YKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-T--SCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-C--CcEEEEecCCCc
Confidence 34799999999999999999999 6 899999998653
No 310
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=96.21 E-value=0.012 Score=53.92 Aligned_cols=34 Identities=18% Similarity=0.374 Sum_probs=29.8
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.|+|||||.+|+-+|..|++ .|. +|+|++|++.+
T Consensus 6 DViIVGaGpaGl~~A~~La~--------------------~G~-~V~v~Er~~~~ 39 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAK--------------------YGL-KTLMIEKRPEI 39 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSST
T ss_pred CEEEECcCHHHHHHHHHHHH--------------------CCC-cEEEEeCCCCC
Confidence 49999999999999999997 677 59999998654
No 311
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=96.19 E-value=0.03 Score=51.98 Aligned_cols=35 Identities=23% Similarity=0.140 Sum_probs=30.1
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.+|+|||||.+|+-+|..|++ .|. +|+|++++...
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~--------------------~G~-~V~viE~~~~~ 41 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGR--------------------QGH-RVVVVEQARRE 41 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSCCC
T ss_pred CCEEEECcCHHHHHHHHHHHh--------------------CCC-cEEEEeCCCCC
Confidence 479999999999999999996 676 59999987543
No 312
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.18 E-value=0.024 Score=55.96 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=30.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
..+|+|||||.+|+-+|..|++ .|. +|+|+++..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar--------------------~G~-~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHK--------------------LGH-DVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHc--------------------CCC-CEEEEcCCC
Confidence 4689999999999999999996 676 699999984
No 313
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.16 E-value=0.0017 Score=62.17 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..|+|+|+|+|-.|...|..|...+ .+|+++|+++
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~--~~v~vId~d~ 36 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGEN--NDITIVDKDG 36 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTT--EEEEEEESCH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCC--CCEEEEECCH
Confidence 4689999999999999999999886 9999999874
No 314
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.14 E-value=0.0037 Score=60.54 Aligned_cols=36 Identities=22% Similarity=0.335 Sum_probs=31.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..+++||||+|+||..+|..|.+. ++.+|.|+|+.+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-PDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-CCCeEEEEcCCC
Confidence 468999999999999999999874 258999999874
No 315
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.08 E-value=0.02 Score=52.11 Aligned_cols=72 Identities=18% Similarity=0.130 Sum_probs=51.6
Q ss_pred CCCeEEEECCchHHHH-HHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFY-TAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~-aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
..++|.|||.|.+|++ +|..|.++| ++|+++|..+.+ | ..+.++..|++++.+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G--~~V~~~D~~~~~---------~-----------~~~~L~~~gi~v~~g~~-- 58 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAG--FEVSGCDAKMYP---------P-----------MSTQLEALGIDVYEGFD-- 58 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTT--CEEEEEESSCCT---------T-----------HHHHHHHTTCEEEESCC--
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCC--CEEEEEcCCCCc---------H-----------HHHHHHhCCCEEECCCC--
Confidence 3579999999999997 788888887 999999986431 1 12234556888875532
Q ss_pred eEEecccce-eccCeEEEeccC
Q 019876 97 SSVSLSELR-QLYHVVVLAYGA 117 (334)
Q Consensus 97 ~~v~~~~~~-~~yd~lIlATGs 117 (334)
..... ..+|.||++.|.
T Consensus 59 ----~~~l~~~~~d~vV~Spgi 76 (326)
T 3eag_A 59 ----AAQLDEFKADVYVIGNVA 76 (326)
T ss_dssp ----GGGGGSCCCSEEEECTTC
T ss_pred ----HHHcCCCCCCEEEECCCc
Confidence 12222 358999999998
No 316
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.05 E-value=0.015 Score=56.15 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
....|+|||+|.+|+-+|..|++ .|. +|+|+++....
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~--------------------~G~-~v~vlE~~~~~ 46 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRL--------------------AGV-EVVVLERLVER 46 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCCC-
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCCC
Confidence 44689999999999999999996 677 59999988644
No 317
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.05 E-value=0.0095 Score=54.30 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=64.8
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC--CcceEEEEeecCccccCCC-----------HHHHHH
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS--SIRKVYLVGRRGPVQAACT-----------AKELRE 226 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~~Vtiv~r~~~~~~~~~-----------~~~~~~ 226 (334)
-+|+|||+|..|+-+|..|++ . |. +|+|+++......... ......
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~--------------------~~~g~-~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~ 124 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAK--------------------NRPDL-KVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHL 124 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHH--------------------HCTTS-CEEEECSSSSCCTTTTCCGGGCCCEEEETTTHH
T ss_pred CCEEEECccHHHHHHHHHHHh--------------------cCCCC-eEEEEecCccccccccccCcccchhhhhhHHHH
Confidence 379999999999999999986 3 54 6999998754321100 022234
Q ss_pred HHcCCceEEEEccCccCCCCCchhhhhccHHHHHHHHHHHHHHhccCCCCCCCceEEEEEeccccceeeccccCC-C--C
Q 019876 227 ILGIKNLYVHIREDDLIKSPTDEEEMKNSRIQRRVYELLSKAAASASSQPMLGQRELHFVFFRKPDSFLESNERS-G--H 303 (334)
Q Consensus 227 ~l~~~gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~-~--~ 303 (334)
.|...|+.+.... .+. .........+.|.+.+. ...||+++.++.++++....+.+ + +
T Consensus 125 ~L~~~Gv~~~~~g-~~~----------~~~~~~~~~~~L~~~a~--------~~~GV~i~~~~~V~~Ll~~~~~~~g~~r 185 (326)
T 2gjc_A 125 FLQELEIPYEDEG-DYV----------VVKHAALFISTVLSKVL--------QLPNVKLFNATCVEDLVTRPPTEKGEVT 185 (326)
T ss_dssp HHHHTTCCCEECS-SEE----------EESCHHHHHHHHHHHHH--------TSTTEEEETTEEEEEEEECCCC-----C
T ss_pred HHHhhCcccccCC-CeE----------EEcchHHHHHHHHHHHH--------HhcCcEEEecceeeeeeecccccCCCcE
Confidence 4444555544321 110 00001122333444433 23589999999999997211002 4 8
Q ss_pred eeEEEEEE
Q 019876 304 VSGVHFEK 311 (334)
Q Consensus 304 v~~v~~~~ 311 (334)
|.+|.+..
T Consensus 186 V~GVvv~~ 193 (326)
T 2gjc_A 186 VAGVVTNW 193 (326)
T ss_dssp EEEEEEEE
T ss_pred EEEEEecc
Confidence 99998864
No 318
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.03 E-value=0.0085 Score=58.83 Aligned_cols=35 Identities=14% Similarity=0.292 Sum_probs=29.8
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
-.|+|||+|..|+-+|..|++ .|. +|+|+++.+.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~--------------------~G~-~V~vlEk~~~~ 156 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKK--------------------AGA-NVILVDKAPFS 156 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------HTC-CEEEECSSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEeCCCCC
Confidence 479999999999999999986 576 59999987643
No 319
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.99 E-value=0.0054 Score=60.47 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=32.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..+++||||||.||+.+|..|.+.+ +.+|.|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~-~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENP-NVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTST-TSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCC-CCcEEEEecCCC
Confidence 3579999999999999999999874 679999999765
No 320
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.97 E-value=0.0052 Score=52.41 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=29.7
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.|+|||+|.+|+-+|..|++ .|. +|+|+++++.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~--------------------~G~-~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTA--------------------AGH-QVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEECCCCC
Confidence 59999999999999999997 787 59999987643
No 321
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.94 E-value=0.0094 Score=47.87 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=32.1
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...++|+|+|+|..|..+|..|.+.+ .+|+++++++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--~~V~vid~~~ 52 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--HSVVVVDKNE 52 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 35679999999999999999999987 8999999864
No 322
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.90 E-value=0.016 Score=57.22 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=29.7
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC------CcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS------SIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~------~~~~Vtiv~r~~~~ 215 (334)
-.|+|||||..|+-+|..|++ . |. +|+|+++...+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~--------------------~~~~~~~G~-~V~vlEk~~~~ 76 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQ--------------------LAAQHEKDL-RVCLVEKAAHI 76 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------HHHHTTCCC-CEEEECSSSST
T ss_pred CCEEEECcCHHHHHHHHHHHh--------------------cccccCCCC-cEEEEeCCCCC
Confidence 479999999999999999986 4 65 59999998654
No 323
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.89 E-value=0.019 Score=56.50 Aligned_cols=35 Identities=29% Similarity=0.348 Sum_probs=29.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..+|+|||+|..|+.+|..|++ .|. +|+|+++.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~--------------------~g~-~v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARD--------------------AGA-KVILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHS--------------------SSC-CEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEecCCC
Confidence 4589999999999999999996 565 5999998754
No 324
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.87 E-value=0.012 Score=56.72 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
...+|+|||+|.+|+-+|..|++ .|. +|+|+++....
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~--------------------~G~-~v~vlE~~~~~ 47 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRL--------------------GGV-DVMVLEQLPQR 47 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEECCCCC
Confidence 34689999999999999999996 677 59999987544
No 325
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.78 E-value=0.011 Score=45.92 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.++|+|||+|..|...|..|.+.+ .+|++++++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g--~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKG--HDIVLIDID 36 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECC
Confidence 479999999999999999999986 899999875
No 326
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.74 E-value=0.032 Score=50.93 Aligned_cols=36 Identities=19% Similarity=0.167 Sum_probs=31.3
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~ 54 (334)
..+++|+|||+|..|...|..|...+ + +|+++|.++
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~~g--~~~V~L~D~~~ 43 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCALRE--LADVVLYDVVK 43 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCh
Confidence 34579999999999999999999886 5 899999864
No 327
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.69 E-value=0.0077 Score=59.38 Aligned_cols=37 Identities=19% Similarity=0.298 Sum_probs=32.5
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...+++||||||.||+.+|..|.+. ++.+|.|+|+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~-~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN-PNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS-TTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC-CCCcEEEEecCC
Confidence 3468999999999999999999875 369999999876
No 328
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.61 E-value=0.0091 Score=57.76 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=32.3
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
.++++|||+|++|+.+|..|.+.+ .+|+|+|+.+..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~--~~v~~~e~~~~~ 40 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAG--VQTLMLEMGQLW 40 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT--CCEEEEESSCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCC--CcEEEEeCCCCC
Confidence 479999999999999999999976 999999998643
No 329
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.48 E-value=0.0074 Score=57.91 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=29.0
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
|+|+|||+|..|+-+|..|++ .|. +|+|+++++.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~--------------------~G~-~V~VlEa~~~~ 36 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQA--------------------AGI-PVLLLEQRDKP 36 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHH--------------------TTC-CEEEECCC---
T ss_pred CCEEEECCcHHHHHHHHHHHH--------------------CCC-cEEEEccCCCC
Confidence 789999999999999999997 675 59999988643
No 330
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=95.46 E-value=0.012 Score=57.00 Aligned_cols=36 Identities=22% Similarity=0.282 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++++|||+|++|+.+|..|.+.+ .+|.|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~--~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAG--IPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--CCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCC--CcEEEEECCCC
Confidence 4579999999999999999999975 99999998754
No 331
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.41 E-value=0.018 Score=53.54 Aligned_cols=38 Identities=16% Similarity=0.200 Sum_probs=30.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+|||||||||..|+-+|..|++ ....-+|+||++++..
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~-------------------~~~~~~Vtlie~~~~~ 39 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKL-------------------ADPSIEVTLIEPNETY 39 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-------------------HCTTSEEEEECSCSSE
T ss_pred cCEEEEECCcHHHHHHHHHHHh-------------------cCcCCeEEEEeCCCCC
Confidence 7999999999999999999875 1122369999988653
No 332
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=95.40 E-value=0.016 Score=53.07 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC--CcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS--SIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~~Vtiv~r~~~ 214 (334)
-.|+|||+|..|+-+|..|++ . |. +|+|+++...
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~--------------------~~~G~-~V~LiEk~~~ 115 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLST--------------------LRPDL-RITIVEAGVA 115 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------HCTTS-CEEEEESSSS
T ss_pred CCEEEECccHHHHHHHHHHHh--------------------cCCCC-EEEEEeCCCc
Confidence 479999999999999999986 3 55 5999998854
No 333
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.19 E-value=0.026 Score=55.51 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.8
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
-.|+|||+|.+|+-+|..|++ .|. +|+|+++....
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~--------------------~G~-~V~VlEr~~~~ 84 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRA--------------------GGV-GALVLEKLVEP 84 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEBSCSSC
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEcCCCCC
Confidence 479999999999999999996 677 59999987543
No 334
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.15 E-value=0.075 Score=48.06 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=29.7
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|+|||+|..|.+.|..++..+-..+++++|..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 68999999999999999998876222899999864
No 335
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.15 E-value=0.029 Score=53.52 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||+|..|...+..|.+.| .+|+|++++
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~g--a~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAG--ARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTT--BEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCc--CEEEEEcCC
Confidence 4689999999999999999999997 999999975
No 336
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=95.08 E-value=0.012 Score=55.50 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=31.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|+|||.|..|...|..|.+.+ .+|+++|+++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g--~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSG--VKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTT--CCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CCEEEEECCH
Confidence 3468999999999999999999987 9999999874
No 337
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=95.04 E-value=0.07 Score=47.48 Aligned_cols=82 Identities=2% Similarity=-0.116 Sum_probs=52.1
Q ss_pred CCeEEEECCch-HHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc-
Q 019876 19 PLRVCVVGSGP-AGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG- 96 (334)
Q Consensus 19 ~~~vvIIGaG~-aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~- 96 (334)
.++++|||+|. +++.+|..+.+.+ .+|+++.+.+.. . . .+.+.+++.++.++.+....
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~--~~v~i~~~~~~~---------~-----~----~~~~~l~~~g~~~~~~~v~~~ 205 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWS--TDLVIATNGNEL---------S-----Q----TIMDELSNKNIPVITESIRTL 205 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTC--SCEEEECSSCCC---------C-----H----HHHHHHHTTTCCEECSCEEEE
T ss_pred CCceeeecCCCchhhhHHHHHHhCC--ceEEEEeccccc---------h-----h----hhhhhhhccceeEeeeeEEEe
Confidence 45677777775 6788898888876 889998775431 1 1 23344566788887665321
Q ss_pred -------eEEecccce-eccCeEEEeccCCCC
Q 019876 97 -------SSVSLSELR-QLYHVVVLAYGAESD 120 (334)
Q Consensus 97 -------~~v~~~~~~-~~yd~lIlATGs~~p 120 (334)
..+.+.+++ ..+|.+|+++|...|
T Consensus 206 ~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~ 237 (304)
T 4fk1_A 206 QGEGGYLKKVEFHSGLRIERAGGFIVPTFFRP 237 (304)
T ss_dssp ESGGGCCCEEEETTSCEECCCEEEECCEEECS
T ss_pred ecCCCeeeeeeccccceeeecceeeeeccccC
Confidence 123444443 478889998887433
No 338
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.04 E-value=0.019 Score=56.12 Aligned_cols=37 Identities=24% Similarity=0.376 Sum_probs=32.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++++|||+|++|+.+|..|.+. ++.+|.|+|+.+.
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~-~~~~v~~~e~g~~ 48 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSED-PAVSVALVEAGPD 48 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTS-TTSCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCCEEEEecCCc
Confidence 357999999999999999999987 2489999999754
No 339
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.02 E-value=0.025 Score=55.85 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++++|||+|++|+.+|..|.+. ++.+|.|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-PKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-TTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEecCCc
Confidence 457999999999999999999983 2499999998754
No 340
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=94.86 E-value=0.013 Score=57.50 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
.+++||||||.||+.+|..|.+. ++.+|.|+|+.+.
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-~~~~VlllEaG~~ 37 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-PDVSVLVLEAGVS 37 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-TTCCEEEECSSBC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-cCCcEEEEecCCc
Confidence 36899999999999999999984 3699999998754
No 341
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.85 E-value=0.031 Score=41.93 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
+++|+|+|+|..|..++..|.+.+ ..+|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g-~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSS-NYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCS-SEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC-CceEEEEeCC
Confidence 468999999999999999999885 3789999875
No 342
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=94.84 E-value=0.031 Score=55.56 Aligned_cols=42 Identities=19% Similarity=0.120 Sum_probs=38.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccc
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVR 61 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~ 61 (334)
..++++|||+|..|...|..|.+.| .+|.++|++++.||.+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g--~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSG--QRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTT--CCEEEECSSSSSCGGGC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCCcccCccc
Confidence 3589999999999999999999997 99999999999988763
No 343
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.75 E-value=0.034 Score=50.12 Aligned_cols=41 Identities=22% Similarity=0.226 Sum_probs=33.4
Q ss_pred cccCCCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 12 FTALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 12 ~~~~~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
+......+++|.|||.|..|...|..|.+.| ++|+++++++
T Consensus 14 ~~~~~~~m~~I~iIG~G~mG~~~A~~l~~~G--~~V~~~dr~~ 54 (310)
T 3doj_A 14 LVPRGSHMMEVGFLGLGIMGKAMSMNLLKNG--FKVTVWNRTL 54 (310)
T ss_dssp ----CCCSCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSG
T ss_pred cCcccccCCEEEEECccHHHHHHHHHHHHCC--CeEEEEeCCH
Confidence 4444556789999999999999999999997 8999999874
No 344
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.72 E-value=0.033 Score=52.84 Aligned_cols=37 Identities=24% Similarity=0.148 Sum_probs=32.9
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..+.+|.|||.|+.|+..|..+++.| ++|+.||-++.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G--~~V~g~Did~~ 55 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLG--HRVVGYDVNPS 55 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHT--CEEEEECSCHH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCC--CcEEEEECCHH
Confidence 35679999999999999999999997 99999998754
No 345
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.72 E-value=0.058 Score=46.29 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=41.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCccccCCCHHHHHHHHcCCceEEEE
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPVQAACTAKELREILGIKNLYVHI 237 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~~~~~~~~~~~~~l~~~gv~~~~ 237 (334)
.+++|+|||||.+|...+..|.+ .|+ +|+++... ..+++.++.+..++.++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~--------------------~GA-~VtVvap~-------~~~~l~~l~~~~~i~~i~ 81 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQ--------------------EGA-AITVVAPT-------VSAEINEWEAKGQLRVKR 81 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGG--------------------GCC-CEEEECSS-------CCHHHHHHHHTTSCEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--------------------CCC-EEEEECCC-------CCHHHHHHHHcCCcEEEE
Confidence 68999999999999999999996 677 59999753 124566666666677764
Q ss_pred c
Q 019876 238 R 238 (334)
Q Consensus 238 ~ 238 (334)
.
T Consensus 82 ~ 82 (223)
T 3dfz_A 82 K 82 (223)
T ss_dssp S
T ss_pred C
Confidence 3
No 346
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.70 E-value=0.046 Score=49.00 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=29.5
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|+|||+|..|.+.|..|...+...+++++|..+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 68999999999999999998886222899999763
No 347
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.67 E-value=0.024 Score=52.39 Aligned_cols=35 Identities=26% Similarity=0.227 Sum_probs=30.5
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
-+|+|||||.+|+-+|..|++ .|. +|+|++|.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~--------------------~G~-~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK--------------------HGI-KVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHh--------------------CCC-CEEEEecCCCC
Confidence 379999999999999999997 687 59999987644
No 348
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.47 E-value=0.029 Score=50.43 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=29.7
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.+|+|||||.+|+-+|..|++ .|. +|+|++++..
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~--------------------~G~-~V~vlE~~~~ 36 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTA--------------------AGH-QVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred ceEEEECCcHHHHHHHHHHHH--------------------CCC-cEEEEECCCC
Confidence 479999999999999999996 676 5999998853
No 349
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.46 E-value=0.035 Score=43.22 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=29.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
+++|+|+|+|..|...|..|.+.+ .+|++++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g--~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMG--HEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTT--CCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 457999999999999999999987 899999875
No 350
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.27 E-value=0.052 Score=44.57 Aligned_cols=33 Identities=15% Similarity=0.035 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhc-CCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKA-HQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~-~~~~~v~vie~~ 53 (334)
.++|+|+|+|..|..+|..|.+. + .+|+++|++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECC
Confidence 56899999999999999999998 8 899999976
No 351
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.24 E-value=0.03 Score=49.60 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=32.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|+|||+|..|...+..|.+.| ++|+|++++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~G--a~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTG--CKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGT--CEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCC--CEEEEEcCCC
Confidence 5689999999999999999999997 9999999753
No 352
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.19 E-value=0.056 Score=50.55 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...+|+|||+|++|+.+|..++..| .+|+++|+.+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLG--AVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCC--CEEEEEcCCH
Confidence 3579999999999999999999997 8999999875
No 353
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.15 E-value=0.038 Score=52.09 Aligned_cols=37 Identities=22% Similarity=0.178 Sum_probs=29.8
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
|+|||||||+.|+.+|..|++ ...--+||||++++.+
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~-------------------~~~~~~VtlI~~~~~~ 39 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRN-------------------LMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-------------------HCTTCEEEEECSSSEE
T ss_pred CcEEEECCCHHHHHHHHHHhc-------------------cCcCCeEEEEcCCCCC
Confidence 789999999999999999985 1122369999998753
No 354
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.01 E-value=0.06 Score=51.38 Aligned_cols=37 Identities=30% Similarity=0.373 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 157 KSTDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 157 ~~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
....+|+|||+|.+|+-+|..|++ .|. +|+|++++++
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~--------------------~g~-~v~v~E~~~~ 45 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK--------------------AGY-KVTVLEARTR 45 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEeccCC
Confidence 356799999999999999999996 565 6999988754
No 355
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=94.00 E-value=0.041 Score=51.42 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
++|+|||+|.+|+-+|..|++ .|. +|+|+++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--------------------~G~-~V~vlE~~~~ 34 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLAR--------------------NGH-EIIVLEKSAM 34 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEeCCCC
Confidence 479999999999999999996 575 6999998754
No 356
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=94.00 E-value=0.077 Score=50.72 Aligned_cols=31 Identities=32% Similarity=0.467 Sum_probs=27.1
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeec
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~ 212 (334)
.|+|||+|..|+-+|..|++ .|. +|+|+++.
T Consensus 1 DVvVIG~G~AGl~aA~~la~--------------------~G~-~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR--------------------AGK-KVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEeCC
Confidence 38999999999999999996 575 59999887
No 357
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.79 E-value=0.061 Score=49.90 Aligned_cols=35 Identities=26% Similarity=0.338 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.+.+|+|||+|.+|+.+|..++..| .+|+++|+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG--a~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG--AKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT--CEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 4579999999999999999999997 8999999874
No 358
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.78 E-value=0.08 Score=47.33 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=31.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.|||+|..|...|..|.+.| ++|+++|+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G--~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATG--HTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 4578999999999999999999987 8999999864
No 359
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.77 E-value=0.039 Score=52.83 Aligned_cols=37 Identities=22% Similarity=0.297 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
..++|+|||+|.+|+.+|..|++ .|. +|+|+++++++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~--------------------~g~-~v~vlE~~~~~ 68 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG--------------------AGH-QVTVLEASERP 68 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--------------------HTC-EEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHh--------------------CCC-eEEEEECCCCC
Confidence 45799999999999999999986 565 69999987543
No 360
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.73 E-value=0.046 Score=50.95 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=29.5
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.+|+|||+|..|+-+|..|++ .|. +|+|+++++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~--------------------~G~-~V~vlE~~~~ 34 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK--------------------AGH-EVEVFERLPI 34 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH--------------------TTC-EEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh--------------------CCC-ceEEEeCCCC
Confidence 379999999999999999996 564 6999999754
No 361
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.72 E-value=0.055 Score=51.32 Aligned_cols=34 Identities=35% Similarity=0.389 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcc-eEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIR-KVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-~Vtiv~r~~ 213 (334)
++|+|||||.+|+-+|..|++ .|.. +|+|+++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~--------------------~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR--------------------APCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT--------------------SSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHh--------------------CCCCCcEEEEeCCC
Confidence 589999999999999999996 4541 699999864
No 362
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.70 E-value=0.066 Score=49.67 Aligned_cols=35 Identities=29% Similarity=0.495 Sum_probs=30.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..+|+|||||.+|+-+|..|++ .|. +|+|+++.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~--------------------~G~-~v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQ--------------------NGI-DVSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT--------------------TTC-EEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCC
Confidence 4689999999999999999996 676 6999999864
No 363
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.60 E-value=0.075 Score=47.84 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=29.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC--eEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~--~v~vie~~ 53 (334)
.+++|+|||+|..|...|..|.+.+ . +|++++++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~g--~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQRG--IAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCCEEEEEeCC
Confidence 3579999999999999999999886 6 99999875
No 364
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.58 E-value=0.059 Score=49.64 Aligned_cols=36 Identities=25% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
..+|+|||||.+|+.+|..|++ .|. +|+|++++...
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~--------------------~G~-~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQ--------------------NGW-DVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEecCCCC
Confidence 4689999999999999999996 676 69999988654
No 365
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.50 E-value=0.064 Score=49.97 Aligned_cols=36 Identities=28% Similarity=0.295 Sum_probs=30.8
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.+|+|||||.+|+-+|..|++ .|.++|+|+++++.+
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~--------------------~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQ--------------------AGIGKVTLLESSSEI 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--------------------TTCSEEEEEESSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHh--------------------CCCCeEEEEECCCCc
Confidence 589999999999999999996 676449999998653
No 366
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.50 E-value=0.16 Score=48.27 Aligned_cols=36 Identities=17% Similarity=0.301 Sum_probs=32.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTP 56 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~ 56 (334)
..+|.|||.|..|+..|..|++.| ++|+++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G--~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG--HEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC--CEEEEEeCCHHH
Confidence 468999999999999999999997 999999998653
No 367
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.46 E-value=0.068 Score=50.00 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
++|+|||||..|+++|..+++ .|. +|++++++.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~--------------------~G~-~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR--------------------LGV-PVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHH--------------------CCC-cEEEEeccC
Confidence 479999999999999999996 676 599999764
No 368
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.43 E-value=0.064 Score=49.77 Aligned_cols=36 Identities=22% Similarity=0.267 Sum_probs=31.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
..+|+|||||.+|+-+|..|++ .|. +|+|+++++..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~--------------------~G~-~v~v~E~~~~~ 40 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRD--------------------AGV-DVDVYERSPQP 40 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEECSSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh--------------------CCC-CEEEEecCCCC
Confidence 4689999999999999999996 676 69999998653
No 369
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=93.43 E-value=0.047 Score=52.22 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=28.1
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
-.|+|||||.+|+-+|..|++ ..|. +|+|++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k-------------------~~G~-~V~VlE~~~~ 45 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQ-------------------IDGP-SWMIVDSNET 45 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-------------------HCCS-CEEEEESSSS
T ss_pred CCEEEECCcHHHHHHHHHHHh-------------------hCCC-CEEEEECCCC
Confidence 469999999999999999985 1354 5899988753
No 370
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=93.42 E-value=0.068 Score=49.67 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
+.-+|+|||||.+|+-+|..|++ .|. +|+|++|.+..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~--------------------~G~-~V~v~E~~~~~ 58 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQ--------------------SGI-DCDVYEAVKEI 58 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--------------------CCC-CEEEEeCCCCC
Confidence 44689999999999999999996 676 59999998643
No 371
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.41 E-value=0.051 Score=51.25 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=29.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.++|+|||||.+|+-+|..|++ .|. +|+|++++.
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~--------------------~G~-~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQ--------------------HDV-DVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHH--------------------TTC-EEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHH--------------------CCC-eEEEEcCCC
Confidence 3689999999999999999996 676 699999876
No 372
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.41 E-value=0.18 Score=48.52 Aligned_cols=72 Identities=18% Similarity=0.102 Sum_probs=50.6
Q ss_pred CCCCCeEEEECCchHHHH-HHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeE
Q 019876 16 SSNPLRVCVVGSGPAGFY-TAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVT 94 (334)
Q Consensus 16 ~~~~~~vvIIGaG~aGl~-aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 94 (334)
....++|.|||.|-+|++ +|..|.++| ++|++.|.... . ..+.++..|+++..+..
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G--~~V~~~D~~~~-----------------~----~~~~l~~~gi~~~~g~~ 75 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEG--YQISGSDLAPN-----------------S----VTQHLTALGAQIYFHHR 75 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTT--CEEEEECSSCC-----------------H----HHHHHHHTTCEEESSCC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCC--CeEEEEECCCC-----------------H----HHHHHHHCCCEEECCCC
Confidence 345689999999999997 699999997 99999987531 1 11234566888876532
Q ss_pred EceEEecccceeccCeEEEeccC
Q 019876 95 LGSSVSLSELRQLYHVVVLAYGA 117 (334)
Q Consensus 95 v~~~v~~~~~~~~yd~lIlATGs 117 (334)
.+. -..+|.||+.+|.
T Consensus 76 ------~~~-~~~~d~vV~Spgi 91 (494)
T 4hv4_A 76 ------PEN-VLDASVVVVSTAI 91 (494)
T ss_dssp ------GGG-GTTCSEEEECTTS
T ss_pred ------HHH-cCCCCEEEECCCC
Confidence 111 1258999999997
No 373
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=93.41 E-value=0.055 Score=50.57 Aligned_cols=33 Identities=30% Similarity=0.377 Sum_probs=28.9
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
+|+|||+|..|+-+|..|++ .|. +|+|++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~--------------------~G~-~V~vlE~~~~ 35 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTN--------------------AGK-KVLLLEGGER 35 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred CEEEECCcHHHHHHHHHHHH--------------------cCC-eEEEEecCCC
Confidence 69999999999999999996 676 6999998654
No 374
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.38 E-value=0.082 Score=49.09 Aligned_cols=35 Identities=31% Similarity=0.557 Sum_probs=31.8
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~ 53 (334)
-...+|||+|||.||+.+|..+...| . +|+++|+.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~G--a~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAG--ATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHT--CCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcC--CCeEEEEECC
Confidence 35679999999999999999999997 7 99999986
No 375
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.32 E-value=0.052 Score=50.11 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=29.7
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC--CcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS--SIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~~Vtiv~r~~~~ 215 (334)
++|+|||||.+|+-+|..|++ . |. +|+|+++.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~--------------------~~~G~-~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQ--------------------ARPLW-AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--------------------HCTTS-EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHh--------------------cCCCC-CEEEEECCCCC
Confidence 379999999999999999996 4 65 69999998654
No 376
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.28 E-value=0.066 Score=48.52 Aligned_cols=33 Identities=24% Similarity=0.385 Sum_probs=29.3
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
-.|+|||+|.+|+-+|..|++ .|. +|+|+++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~--------------------~G~-~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAA--------------------GGH-EVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHh--------------------CCC-eEEEEeCCC
Confidence 479999999999999999996 676 599999985
No 377
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.19 E-value=0.092 Score=49.17 Aligned_cols=35 Identities=31% Similarity=0.438 Sum_probs=31.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...+|+|||+|.+|+.++..++..| .+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~ 205 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRP 205 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCH
Confidence 3679999999999999999999987 8999999864
No 378
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.17 E-value=0.073 Score=49.21 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=29.7
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
-.|+|||+|.+|+-+|..|++ .|. +|+|+++...
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~--------------------~G~-~V~vlE~~~~ 38 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAE--------------------RGH-RVLVLERHTF 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESSCT
T ss_pred CCEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEeCCCC
Confidence 379999999999999999996 676 5999998754
No 379
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.15 E-value=0.075 Score=48.50 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=30.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..++|+|||+|.+|+-+|..|++ |. +|+|+++.+.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La~---------------------G~-~V~vlE~~~~ 42 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLSA---------------------HG-RVVVLEREAQ 42 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT---------------------TS-CEEEECSSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHhC---------------------CC-CEEEEECCCC
Confidence 35789999999999999999984 65 5999999853
No 380
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=93.14 E-value=0.078 Score=49.45 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
...+|+|||||..|+-+|..|++ .|..+|+|+++++++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~--------------------~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ--------------------AGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--------------------TTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh--------------------CCCCcEEEEECCCCC
Confidence 45789999999999999999996 562369999987543
No 381
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.13 E-value=0.11 Score=48.31 Aligned_cols=35 Identities=31% Similarity=0.330 Sum_probs=31.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...+|+|||+|.+|+.++..++..| .+|+++|+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 4689999999999999999999987 8999999864
No 382
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.12 E-value=0.07 Score=48.90 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.3
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+|+|||||.+|+-+|..|++ .|. +|+|+++..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~--------------------~G~-~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAK--------------------ENK-NTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh--------------------CCC-cEEEEeCCC
Confidence 589999999999999999996 676 599999874
No 383
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.08 E-value=0.11 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=30.7
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
|+|.|||+|..|...|..|.+.+ .+|+++++++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG--HEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCC--CCEEEEEcCcc
Confidence 58999999999999999999987 89999998753
No 384
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=93.05 E-value=0.062 Score=51.85 Aligned_cols=36 Identities=22% Similarity=0.415 Sum_probs=29.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..+|+|||||..|+-+|..|.+ .|..+|+|++++++
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~--------------------~G~~~V~VlEa~~r 43 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQ--------------------NGIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHH--------------------TTCCSEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHh--------------------cCCCCEEEEeCCCC
Confidence 3689999999999999999996 56235999988753
No 385
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.00 E-value=0.082 Score=49.15 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+|+|||||.+|+-+|..|++ .|. +|+|+++..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~--------------------~G~-~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNK--------------------SGF-KVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--------------------TTC-CEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh--------------------CCC-CEEEEeCCC
Confidence 479999999999999999996 676 599999985
No 386
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.95 E-value=0.11 Score=38.85 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=29.3
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
..++|+|+|+|.+|..++..|.+ .|..+|+++.|+.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~--------------------~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKT--------------------SSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHH--------------------CSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHh--------------------CCCceEEEEeCCH
Confidence 35789999999999999999986 5644688888763
No 387
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.91 E-value=0.11 Score=46.84 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=29.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
++|+|||+|..|...|..|.+.+ .+|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG--HCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT--CEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEeCC
Confidence 79999999999999999999987 899999875
No 388
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=92.90 E-value=0.86 Score=46.48 Aligned_cols=73 Identities=15% Similarity=0.002 Sum_probs=44.5
Q ss_pred CCCCeEEEECC-chHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccc---cCCCCcchhHHHHHHHHHhhcCCcEEEeC
Q 019876 17 SNPLRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSG---VAPDHPETKIVINQFSRVVQHERCSFFGN 92 (334)
Q Consensus 17 ~~~~~vvIIGa-G~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~---~~p~~~~~~~~~~~~~~~~~~~~i~~~~~ 92 (334)
....+|+|.|+ |..|+.+...++..| .+|+.....+.. ..+..+ ++... ..++...+.+.....|++++.+
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~G--a~V~~t~~~~k~-~~l~lga~~v~~~~--~~~~~~~i~~~t~g~GvDvVld 418 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLG--AEVYATASEDKW-QAVELSREHLASSR--TCDFEQQFLGATGGRGVDVVLN 418 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTT--CCEEEECCGGGG-GGSCSCGGGEECSS--SSTHHHHHHHHSCSSCCSEEEE
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcC--CEEEEEeChHHh-hhhhcChhheeecC--ChhHHHHHHHHcCCCCeEEEEE
Confidence 45689999996 999999999888887 888887654321 111111 10100 1134445555555567887766
Q ss_pred eE
Q 019876 93 VT 94 (334)
Q Consensus 93 ~~ 94 (334)
+.
T Consensus 419 ~~ 420 (795)
T 3slk_A 419 SL 420 (795)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 389
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.89 E-value=0.14 Score=48.93 Aligned_cols=79 Identities=16% Similarity=0.163 Sum_probs=51.4
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEE
Q 019876 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTL 95 (334)
Q Consensus 16 ~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v 95 (334)
....++|+|+|||-.|..+|..|.+. ++|.++|++. +-...+.+.+. +..++.+...
T Consensus 232 ~~~~~~v~I~GgG~ig~~lA~~L~~~---~~v~iIE~d~------------------~r~~~la~~l~--~~~Vi~GD~t 288 (461)
T 4g65_A 232 EKPYRRIMIVGGGNIGASLAKRLEQT---YSVKLIERNL------------------QRAEKLSEELE--NTIVFCGDAA 288 (461)
T ss_dssp GSCCCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCH------------------HHHHHHHHHCT--TSEEEESCTT
T ss_pred cccccEEEEEcchHHHHHHHHHhhhc---CceEEEecCH------------------HHHHHHHHHCC--CceEEecccc
Confidence 34567999999999999999998654 8999999863 22233444443 3444443322
Q ss_pred ceEEecccceeccCeEEEeccC
Q 019876 96 GSSVSLSELRQLYHVVVLAYGA 117 (334)
Q Consensus 96 ~~~v~~~~~~~~yd~lIlATGs 117 (334)
+..+-.+.+-..+|.+|-+||.
T Consensus 289 d~~~L~ee~i~~~D~~ia~T~~ 310 (461)
T 4g65_A 289 DQELLTEENIDQVDVFIALTNE 310 (461)
T ss_dssp CHHHHHHTTGGGCSEEEECCSC
T ss_pred chhhHhhcCchhhcEEEEcccC
Confidence 2222222233579999999987
No 390
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.89 E-value=0.11 Score=46.29 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=29.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
+++|.|||+|..|...|..|.+.+ .+|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g--~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGG--NDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCC--CcEEEEECC
Confidence 479999999999999999999987 899999875
No 391
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=92.88 E-value=0.062 Score=49.04 Aligned_cols=33 Identities=21% Similarity=0.417 Sum_probs=29.0
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.|+|||||.+|+-+|..|++ .|. +|+|+++...
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~--------------------~G~-~V~vle~~~~ 36 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATR--------------------AGL-NVLMTDAHMP 36 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHH--------------------TTC-CEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEecCCC
Confidence 69999999999999999996 676 5999998753
No 392
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.81 E-value=0.14 Score=43.17 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=31.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|.|||+|..|.+.|..|.+.+ .+|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g--~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAG--HEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHH
Confidence 4579999999999999999999987 89999998754
No 393
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.79 E-value=0.11 Score=48.02 Aligned_cols=34 Identities=29% Similarity=0.421 Sum_probs=31.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~ 53 (334)
...+|+|+|||.+|..+|..|...| . +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G--~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLG--VKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHT--CCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECC
Confidence 5689999999999999999999997 5 89999986
No 394
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=92.76 E-value=0.085 Score=48.38 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=29.4
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
-+|+|||+|.+|+-+|..|++ .|. +|+|+++...
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~--------------------~G~-~V~vie~~~~ 37 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAK--------------------QGV-KTLLVDAFDP 37 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSCS
T ss_pred CCEEEECCCHHHHHHHHHHHh--------------------CCC-eEEEEeCCCC
Confidence 479999999999999999996 676 5999998753
No 395
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.69 E-value=0.046 Score=51.60 Aligned_cols=36 Identities=25% Similarity=0.250 Sum_probs=29.8
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCC-----cceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS-----IRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Vtiv~r~~~~ 215 (334)
++|+|||||.+|+-+|..|++ .| ..+|+|+++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~--------------------~G~~~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEK--------------------EIKEKNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------HHTTTTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHH--------------------hccccCCCCCEEEEECCCCC
Confidence 689999999999999999996 44 1469999987543
No 396
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.64 E-value=0.14 Score=45.28 Aligned_cols=34 Identities=26% Similarity=0.123 Sum_probs=31.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.++|.|||+|..|...|..+++.| ++|+++|+++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G--~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHG--FAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CeEEEEeCCH
Confidence 469999999999999999999997 9999999864
No 397
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.60 E-value=0.064 Score=42.23 Aligned_cols=33 Identities=18% Similarity=0.118 Sum_probs=29.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.++|+|||+|..|...+..|.+.+ .+|+++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g--~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQ--YKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTT--CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEcCC
Confidence 679999999999999999998876 789999875
No 398
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.59 E-value=0.14 Score=46.95 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=31.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
+++|+|||||..|..++..+++.| ++++++|.++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G--~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAG--MKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCCC
Confidence 479999999999999999999997 99999998754
No 399
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.54 E-value=0.085 Score=48.34 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+|+|||||.+|+-+|..|++ .|. +|+|+++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~--------------------~G~-~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAK--------------------RGE-EVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEeCCC
Confidence 579999999999999999996 676 599999874
No 400
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.53 E-value=0.2 Score=39.21 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=28.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
..++|+|+|.|.+|..+|..|.+ .|. +|+++.+..
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~--------------------~g~-~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLA--------------------SDI-PLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEECCH
Confidence 34789999999999999999986 565 588887753
No 401
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.51 E-value=0.14 Score=40.70 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+++|+|+|+|.+|..+|..|.. .|. +|+++.|+.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~--------------------~g~-~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASS--------------------SGH-SVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHh--------------------CCC-eEEEEECCH
Confidence 67899999999999999999986 565 699998864
No 402
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.50 E-value=0.13 Score=46.94 Aligned_cols=34 Identities=32% Similarity=0.463 Sum_probs=29.3
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
...|+|||+|.+|+-+|..|++ .|. +|+|+++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~--------------------~G~-~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILAR--------------------KGY-SVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH--------------------TTC-EEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh--------------------CCC-EEEEEeccC
Confidence 3589999999999999999986 575 699999853
No 403
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.46 E-value=0.13 Score=47.24 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=31.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.|||+|.-|.+.|..|.+.+ .+|+++++++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G--~~V~l~~r~~ 62 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKG--QKVRLWSYES 62 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTT--CCEEEECSCH
T ss_pred cCCeEEEECccHHHHHHHHHHHHCC--CeEEEEeCCH
Confidence 4579999999999999999999987 8999999863
No 404
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=92.40 E-value=0.073 Score=49.14 Aligned_cols=34 Identities=24% Similarity=0.483 Sum_probs=29.6
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.+|+|||||.+|+-+|..|++ .|. +|+|+++.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~--------------------~G~-~v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHK--------------------AGI-DNVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------HTC-CEEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCC
Confidence 369999999999999999996 576 5999998864
No 405
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.38 E-value=0.1 Score=49.49 Aligned_cols=37 Identities=19% Similarity=0.240 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
...+|+|||+|.+|+-+|..|++ .|. +|+|+++++.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~--------------------~g~-~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRS--------------------RGT-DAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHT--------------------TTC-CEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEEcCCCC
Confidence 56789999999999999999996 565 69999988643
No 406
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.38 E-value=0.11 Score=48.11 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeec
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~ 212 (334)
...+|+|||+|.+|+-+|..|.+ .|. +|+|++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~--------------------~G~-~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR--------------------AGH-DVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH--------------------TSC-EEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEecc
Confidence 56799999999999999999996 565 69999988
No 407
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.37 E-value=0.13 Score=46.64 Aligned_cols=33 Identities=27% Similarity=0.560 Sum_probs=30.0
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.++|+|||+|..|...|..|.+.+ .+|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g--~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAG--EAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTT--CCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC--CEEEEEECh
Confidence 479999999999999999999987 899999863
No 408
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.35 E-value=0.16 Score=45.64 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=30.0
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|+|||+|..|...|..|.+.+.+.+|+++|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 58999999999999999998853348999999864
No 409
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.33 E-value=0.1 Score=49.00 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=30.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
...|+|||||..|+-+|..|++ .|.++|+|+++...
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~--------------------~G~~~V~vlE~~~~ 41 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLAR--------------------RGYTNVTVLDPYPV 41 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--------------------TTCCCEEEEESSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--------------------cCCCcEEEEeCCCC
Confidence 3579999999999999999996 67535999998754
No 410
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.24 E-value=0.15 Score=45.81 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=29.0
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
++|+|||+|..|...|..|...+...+|+++|.+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 5899999999999999999888621289999975
No 411
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=92.23 E-value=0.095 Score=50.51 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=30.1
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.+|+|||||..|+-+|..|++ .|. +|+|+++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~--------------------~G~-~V~vlE~~~~~ 39 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHD--------------------SGL-NVVVLEARDRV 39 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHH--------------------TTC-CEEEECSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCCC
Confidence 579999999999999999996 565 69999987644
No 412
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.20 E-value=0.12 Score=45.66 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeec
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRR 212 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~ 212 (334)
.+++|+|||||.+|...+..|.+ .|+ +|+|+...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~--------------------~Ga-~VtViap~ 45 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMP--------------------TGC-KLTLVSPD 45 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGG--------------------GTC-EEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHh--------------------CCC-EEEEEcCC
Confidence 68999999999999999999996 687 59999765
No 413
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=92.17 E-value=0.12 Score=48.90 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=30.1
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..+|+|||+|..|+-+|..|++ .|. +|+++++++.
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~--------------------~G~-~V~vlE~~~~ 45 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSV--------------------DGK-KVLHIDKQDH 45 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH--------------------CCC-eEEEEeCCCC
Confidence 3579999999999999999996 565 6999999864
No 414
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.15 E-value=0.17 Score=43.75 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=31.4
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...++|.|||+|..|...|..|.+.+ ++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G--~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLG--HEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCh
Confidence 35689999999999999999999987 8999999864
No 415
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.12 E-value=0.16 Score=45.96 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=30.2
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
+++||+|||+|..|..+|..|...+.-.+++++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4579999999999999999999886223899999763
No 416
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.09 E-value=0.12 Score=46.41 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=28.8
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
++|+|||+|..|.+.|..|.+.+ .+|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g--~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSG--EDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTS--CCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCC--CeEEEEEcC
Confidence 68999999999999999999987 899999875
No 417
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=92.07 E-value=0.12 Score=48.96 Aligned_cols=34 Identities=26% Similarity=0.316 Sum_probs=29.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
-+|+|||||..|+-+|..|++ .|. +|+|+++...
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~--------------------~G~-~V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSR--------------------RGL-KILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSS--------------------SSC-CEEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEECCCC
Confidence 479999999999999999996 676 5999999865
No 418
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.91 E-value=0.19 Score=45.34 Aligned_cols=34 Identities=26% Similarity=0.251 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~ 54 (334)
.++|+|||+|..|...|..|.+.+ + +|+++|.++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g--~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDN--LADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT--CCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCc
Confidence 479999999999999999999986 6 899999864
No 419
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.89 E-value=0.18 Score=46.36 Aligned_cols=33 Identities=33% Similarity=0.435 Sum_probs=30.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..+|+|+|+|.+|..++..++..| .+|+++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G--a~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG--AQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCC
Confidence 479999999999999999999997 799999876
No 420
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.89 E-value=0.17 Score=43.97 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..+|+|||+|..|..+|.+|.+.| -.+++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~G-v~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAG-VGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHT-CSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcC-CCeEEEEcCCC
Confidence 479999999999999999999997 23899999874
No 421
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.88 E-value=0.19 Score=48.24 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=32.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.|||+|..|+..|..|++.+++++|+++|+++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 3579999999999999999999985558999999864
No 422
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.88 E-value=0.17 Score=48.52 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=31.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..|+|.|||+|..|+..|..|++.| .+|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G--~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIG--HDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCC--CEEEEEECCH
Confidence 4589999999999999999999997 8999999864
No 423
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=91.85 E-value=0.14 Score=46.26 Aligned_cols=36 Identities=19% Similarity=0.270 Sum_probs=28.0
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+|+|||||.+|+-+|..|++.. ..|. +|+|++++.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~-----------------~~G~-~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQT-----------------SGPL-YLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC------------------CCE-EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhc-----------------cCCc-eEEEEECCC
Confidence 37999999999999999998400 0355 699999874
No 424
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.83 E-value=0.14 Score=46.34 Aligned_cols=35 Identities=29% Similarity=0.205 Sum_probs=30.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
...+|+|||+|..|..-|..++..| ++|+++|..+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G--~~V~l~D~~~ 39 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCC--CeEEEEECCH
Confidence 3469999999999999999999997 9999999864
No 425
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.82 E-value=0.15 Score=48.76 Aligned_cols=37 Identities=22% Similarity=0.304 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
...+|+|||+|..|+-+|..|++ .|. +|+|+++++++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~--------------------~g~-~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI--------------------HGL-NVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT--------------------TSC-EEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEEeCCCC
Confidence 34789999999999999999996 565 69999988654
No 426
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.79 E-value=0.19 Score=48.14 Aligned_cols=36 Identities=22% Similarity=0.114 Sum_probs=33.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhc-CCCC-eEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKA-HQEA-QVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~-~~~~-~v~vie~~~~ 55 (334)
..++|.|||+|..|+..|..|++. | + +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G--~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPC--FEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTT--CCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCC--CCeEEEEECChh
Confidence 457999999999999999999999 7 8 9999998865
No 427
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.79 E-value=0.19 Score=39.13 Aligned_cols=22 Identities=14% Similarity=0.273 Sum_probs=20.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHcc
Q 019876 159 TDTAVILGQGNVALDVARILLR 180 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~ 180 (334)
.++++|+|+|.+|..+|..|.+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~ 27 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTA 27 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH
Confidence 4789999999999999999986
No 428
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.77 E-value=0.19 Score=45.79 Aligned_cols=33 Identities=21% Similarity=0.048 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.++|.|||+|..|...|..|.+.+ .+|+++++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g--~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG--QSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC--CEEEEEeCC
Confidence 479999999999999999999987 899999875
No 429
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.69 E-value=0.21 Score=45.33 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=30.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||+|..|.++|..|+..+.-.+++++|..
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 467999999999999999999988622389999875
No 430
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.62 E-value=0.29 Score=46.60 Aligned_cols=37 Identities=19% Similarity=0.081 Sum_probs=32.7
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
...++|.|||+|..|...|..+++.| ++|+++|.++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG--~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAG--IETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEECcHH
Confidence 34579999999999999999999997 99999998753
No 431
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=91.56 E-value=0.17 Score=46.95 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=28.6
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.+|+|||+|.+|+-+|..|++ .|. +|+|+++++.
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~--------------------~g~-~v~v~E~~~~ 37 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAE--------------------KGH-QVHIIDQRDH 37 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--------------------TTC-EEEEEESSSS
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-cEEEEEecCC
Confidence 489999999999999999996 454 6999988753
No 432
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.52 E-value=0.19 Score=47.81 Aligned_cols=33 Identities=33% Similarity=0.354 Sum_probs=30.9
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|.|||+|..|+..|..|++.| .+|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G--~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELG--ANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcC--CEEEEEECCH
Confidence 69999999999999999999997 8999999874
No 433
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.52 E-value=0.18 Score=50.35 Aligned_cols=34 Identities=26% Similarity=0.272 Sum_probs=29.8
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
..+|+|||||.+|+-+|..|++ .|. +|+|+++.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~--------------------~G~-~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLR--------------------RGW-QVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--------------------TTC-EEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHH--------------------CCC-eEEEEeCCC
Confidence 3689999999999999999996 676 699999864
No 434
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.51 E-value=0.19 Score=42.53 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=29.3
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|.|||+|..|...|..|.+.+ .+|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g--~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSG--FKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTT--CCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 5679999999999999999999886 899999875
No 435
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.48 E-value=0.24 Score=44.96 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=30.1
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~ 54 (334)
+++|+|||+|..|...|..|+..+ . +|+++|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g--~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKD--LGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEECCH
Confidence 369999999999999999999886 5 899999864
No 436
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=91.45 E-value=0.15 Score=47.99 Aligned_cols=34 Identities=24% Similarity=0.393 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.+|+|||+|..|+-+|..|++ .|. +|+|+++++.
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~--------------------~g~-~v~v~E~~~~ 39 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRK--------------------AGL-SVAVIEARDR 39 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHH--------------------CCC-cEEEEECCCC
Confidence 589999999999999999996 565 5999988753
No 437
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.45 E-value=0.26 Score=44.44 Aligned_cols=48 Identities=19% Similarity=0.132 Sum_probs=31.6
Q ss_pred ccccccccCC-CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 7 WLSRSFTALS-SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 7 ~~~~~~~~~~-~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+++++.... ...++|.|||.|..|.+.|..|++.|...+|+++++++
T Consensus 20 ~~~~~~~~~~~~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 20 HMKNIIKILKSLSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp ---------CCCSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CcCcCCchhhhcCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4444433322 23479999999999999999999997222999998864
No 438
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=91.42 E-value=0.16 Score=49.11 Aligned_cols=35 Identities=29% Similarity=0.449 Sum_probs=30.6
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
..|+|||||.+|+-+|..|++ .|. +|+|+++....
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~--------------------~G~-~v~viEr~~~~ 40 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLAR--------------------QGV-RVLVVERRPGL 40 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHT--------------------TTC-CEEEECSSSSC
T ss_pred CcEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCCC
Confidence 579999999999999999997 677 59999998643
No 439
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.35 E-value=0.26 Score=44.59 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=29.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~ 54 (334)
.++|+|||+|..|...|..|...+ . +|+++|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g--~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKN--LGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCH
Confidence 469999999999999999999886 5 799999764
No 440
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.32 E-value=0.14 Score=45.51 Aligned_cols=33 Identities=24% Similarity=0.405 Sum_probs=30.3
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
++|+|||+|..|...|..|.+.+ .+|+++++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g--~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSL--PHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHC--TTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCC--CeEEEEEecc
Confidence 68999999999999999999987 7999999874
No 441
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=91.29 E-value=0.29 Score=45.27 Aligned_cols=40 Identities=13% Similarity=0.192 Sum_probs=34.0
Q ss_pred cCCCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 14 ALSSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 14 ~~~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
......++|+|||+|..|..++..+++.| +++++++..+.
T Consensus 9 ~~~~~~k~IlIlG~G~~g~~la~aa~~~G--~~vi~~d~~~~ 48 (389)
T 3q2o_A 9 RIILPGKTIGIIGGGQLGRMMALAAKEMG--YKIAVLDPTKN 48 (389)
T ss_dssp CCCCTTSEEEEECCSHHHHHHHHHHHHTT--CEEEEEESSTT
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEeCCCC
Confidence 33346689999999999999999999997 99999997643
No 442
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=91.29 E-value=0.12 Score=46.84 Aligned_cols=33 Identities=18% Similarity=0.239 Sum_probs=28.0
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCC-----cceEEEEeecC
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS-----IRKVYLVGRRG 213 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Vtiv~r~~ 213 (334)
.|+|||||.+|+-+|..|++ .| ..+|+|+++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~--------------------~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHE--------------------RYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------------------HHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHH--------------------hccccCCCceEEEEECCC
Confidence 69999999999999999996 44 14699999874
No 443
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.25 E-value=0.26 Score=44.68 Aligned_cols=35 Identities=20% Similarity=0.162 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~ 54 (334)
+.++|+|||+|..|.+.|..|...+ . +++++|..+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~--~~~v~L~Di~~ 41 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKE--LGDVVLFDIAE 41 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEeCCc
Confidence 4579999999999999999999886 5 999999764
No 444
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.23 E-value=0.22 Score=44.01 Aligned_cols=33 Identities=30% Similarity=0.395 Sum_probs=30.6
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
++|.|||.|..|...|..|.+.+ ++|+++++++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG--CSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCC--CeEEEEcCCH
Confidence 68999999999999999999997 8999999874
No 445
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.22 E-value=0.24 Score=44.23 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=31.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.|||.|..|...|..|.+.| ++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG--LSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC--CeEEEEECCH
Confidence 4579999999999999999999987 8999998763
No 446
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.21 E-value=0.24 Score=45.73 Aligned_cols=34 Identities=35% Similarity=0.486 Sum_probs=30.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|+|+|..|..+|..++..| ++|++++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~G--a~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMG--AQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECC
Confidence 3589999999999999999999997 899999875
No 447
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=91.17 E-value=0.27 Score=44.40 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=30.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~ 53 (334)
..++|+|||+|..|...|..++..+ . +++++|..
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g--~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKE--LADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CCeEEEEecc
Confidence 4579999999999999999999886 6 99999986
No 448
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.13 E-value=0.24 Score=45.84 Aligned_cols=34 Identities=32% Similarity=0.498 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||+|..|..+|..++..| ++|+++++.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~G--a~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMG--ATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEeCC
Confidence 4689999999999999999999987 899999875
No 449
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=91.12 E-value=0.13 Score=47.80 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=28.5
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC--CcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS--SIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~--~~~~Vtiv~r~~ 213 (334)
..|+|||+|.+|+-+|..|++ . |. +|+|+++..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~--------------------~~pG~-~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQ--------------------LAPGR-SLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------HCTTS-CEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHh--------------------cCCCC-eEEEEeCCC
Confidence 479999999999999999996 5 65 599999864
No 450
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=91.11 E-value=0.16 Score=50.41 Aligned_cols=33 Identities=18% Similarity=0.233 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
-.|+|||||..|+++|..+++ .|. +|.|+++..
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr--------------------~G~-kVlLIEk~~ 61 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAAR--------------------MGQ-QTLLLTHNI 61 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCG
T ss_pred CCEEEECChHHHHHHHHHHHh--------------------CCC-CEEEEeecc
Confidence 479999999999999999996 676 599999863
No 451
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=91.06 E-value=0.17 Score=49.30 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=30.4
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
..|+|||+|.+|+-+|..|++ .|. +|+|+++++..
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~--------------------~G~-~V~vlEr~~~~ 61 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAH--------------------RQV-GHLVVEQTDGT 61 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSCSC
T ss_pred CCEEEECcCHHHHHHHHHHHH--------------------CCC-CEEEEeCCCCC
Confidence 479999999999999999996 677 49999998644
No 452
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.06 E-value=0.24 Score=49.60 Aligned_cols=34 Identities=29% Similarity=0.249 Sum_probs=29.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
...|+|||||.+|+-+|..|++ .|. +|+|+++.+
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~--------------------~G~-~V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQR--------------------RGA-VVTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHT--------------------TTC-CEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHH--------------------CCC-cEEEEeCCC
Confidence 3689999999999999999996 676 599999864
No 453
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.00 E-value=0.17 Score=44.09 Aligned_cols=36 Identities=14% Similarity=0.287 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.+++|+|||+|.+|.++|..|++ .|+.+++++.+..
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~--------------------~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLAS--------------------AGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHH--------------------HTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHH--------------------cCCCeEEEEcCCC
Confidence 45899999999999999999996 7888899998864
No 454
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=91.00 E-value=0.16 Score=48.42 Aligned_cols=35 Identities=23% Similarity=0.369 Sum_probs=30.0
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCcc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGPV 215 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~~ 215 (334)
.+|+|||+|..|+-+|..|.+ .|. +|+|+++++++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~--------------------~g~-~v~v~E~~~~~ 74 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV--------------------AGF-KTLLLEARDRI 74 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH--------------------TTC-CEEEECSSSBS
T ss_pred CCEEEECCcHHHHHHHHHHHH--------------------CCC-CEEEEeCCCCC
Confidence 689999999999999999996 565 69999987644
No 455
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.97 E-value=0.25 Score=44.29 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=28.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.|+|+|||+|..|...|..|. .+ .+|++++++
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g--~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LY--HDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT--SEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cC--CceEEEECC
Confidence 379999999999999999999 76 899999875
No 456
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.96 E-value=0.24 Score=47.21 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.8
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.++|.|||.|..|...|..|++.+++.+|+++++++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 479999999999999999999984448999999864
No 457
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.95 E-value=0.25 Score=39.15 Aligned_cols=34 Identities=15% Similarity=0.213 Sum_probs=28.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
.++++|+|+|.+|..++..|.+ .|. +|+++.+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~--------------------~g~-~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ--------------------RGQ-NVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEECCC
Confidence 4789999999999999999986 564 588888863
No 458
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.88 E-value=0.24 Score=44.77 Aligned_cols=35 Identities=29% Similarity=0.205 Sum_probs=30.7
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.|||+|..|...|..+++.| ++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G--~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGG--FRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT--CCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 3578999999999999999999997 9999999874
No 459
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=90.85 E-value=0.24 Score=38.02 Aligned_cols=22 Identities=27% Similarity=0.335 Sum_probs=19.6
Q ss_pred CCeEEEEcCCHHHHHHHHHHcc
Q 019876 159 TDTAVILGQGNVALDVARILLR 180 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~ 180 (334)
+.+|+|+|+|.+|..+|..|.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~ 25 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSE 25 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh
Confidence 4689999999999999999986
No 460
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.84 E-value=0.28 Score=42.96 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=31.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
+++|+|.|+|..|...+..|.+.+ ++|+++.+.+.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQG--HEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTT--CCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCcc
Confidence 578999999999999999999997 89999988643
No 461
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=90.79 E-value=0.16 Score=48.73 Aligned_cols=33 Identities=12% Similarity=0.243 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
-.|+|||||.+|+-+|..|++ .|. +|+|+++.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~--------------------~G~-~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAG--------------------RGL-SVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHh--------------------CCC-CEEEEECCC
Confidence 369999999999999999996 676 599999864
No 462
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.79 E-value=0.21 Score=47.85 Aligned_cols=36 Identities=25% Similarity=0.242 Sum_probs=29.9
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
..+|+|||+|.+|+-+|..|++ .|..+|+|+++++.
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~--------------------~g~~~v~v~E~~~~ 44 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTE--------------------LGYKNWHLYECNDT 44 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHH--------------------TTCCSEEEEESSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHH--------------------cCCCCEEEEeCCCC
Confidence 4689999999999999999986 55346999988753
No 463
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.77 E-value=0.32 Score=42.87 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=31.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.++++|||+|-+|-+++..|.+.| .+|+|++|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G--~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG--LQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCH
Confidence 689999999999999999999997 8999998864
No 464
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=90.76 E-value=0.17 Score=50.13 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=28.9
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
-.|+|||||..|+++|..+++ .|. +|.|+++..
T Consensus 28 yDVIVIGgG~AGl~AAlalAr--------------------~G~-kVlLIEk~~ 60 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAAR--------------------MGA-KTAMFVLNA 60 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCG
T ss_pred CCEEEECCCHHHHHHHHHHHH--------------------CCC-CEEEEEecc
Confidence 479999999999999999996 676 599999863
No 465
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.75 E-value=0.32 Score=44.06 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=30.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~~ 54 (334)
+.++|+|||+|..|.+.|..|...+ . +++++|..+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~--~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQ--LGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC--CceEEEEeCCh
Confidence 3579999999999999999998876 4 999999764
No 466
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=90.75 E-value=0.27 Score=44.15 Aligned_cols=37 Identities=16% Similarity=0.189 Sum_probs=30.0
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
+.++|+|||+|..|...|..+...+...+++|+|.++
T Consensus 13 ~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 13 TVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3579999999999999999998887223999999864
No 467
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.72 E-value=0.27 Score=44.50 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.++|.|||+|..|...|..|.+.+ .+|+++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G--~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENG--EEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSS
T ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CeEEEEeCC
Confidence 579999999999999999999987 899999875
No 468
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.70 E-value=0.22 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=30.3
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|.|||+|..|...|..|++.| .+|+++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G--~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG--HEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCH
Confidence 58999999999999999999987 8999999864
No 469
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.67 E-value=0.37 Score=45.50 Aligned_cols=35 Identities=26% Similarity=0.145 Sum_probs=31.5
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++-|||.|..|+..|..|++.| ++|+++|.++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G--~~V~~~D~~~~ 45 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHG--VDVLGVDINQQ 45 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTT--CEEEEECSCHH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCC--CEEEEEECCHH
Confidence 468999999999999999999997 99999998754
No 470
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.66 E-value=0.25 Score=43.96 Aligned_cols=34 Identities=24% Similarity=0.316 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
+++|.|||+|..|...|..|.+.+ ++|+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAG--YLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTT--CEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCC--CeEEEEcCCH
Confidence 579999999999999999999987 8999998763
No 471
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.65 E-value=0.19 Score=49.86 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=29.1
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
-.|+|||||..|+++|..|++ .|. +|.|+++..
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr--------------------~G~-kVlLIEk~~ 54 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVAR--------------------GGL-HCLLITSDL 54 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEEESCG
T ss_pred CCEEEECccHHHHHHHHHHHH--------------------CCC-cEEEEEecc
Confidence 589999999999999999996 676 599999874
No 472
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=90.61 E-value=0.21 Score=46.72 Aligned_cols=34 Identities=29% Similarity=0.305 Sum_probs=28.5
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
..+|+|||+|.+|+-+|..|++ .|. +|+|+++++
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~--------------------~g~-~v~v~E~~~ 62 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLAS--------------------SGQ-RVLIVDRRP 62 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH--------------------TTC-CEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHH--------------------CCC-ceEEEeccC
Confidence 4589999999999999999986 455 588888764
No 473
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.60 E-value=0.25 Score=44.57 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=29.0
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCC--eEEEEcCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEA--QVDIIDRL 53 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~--~v~vie~~ 53 (334)
++|+|||+|..|...|..|.+.+ . +|+++|++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g--~~~~V~l~D~~ 34 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG--FAREMVLIDVD 34 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT--CCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCCeEEEEeCC
Confidence 58999999999999999999887 6 89999875
No 474
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.54 E-value=0.32 Score=42.78 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=30.8
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++++|+|+|-+|.++|..|.+.| .+|+++++.
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G--~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLD--CAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcC--CEEEEEECC
Confidence 4579999999999999999999997 899999875
No 475
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.48 E-value=0.29 Score=44.13 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=31.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.|||.|..|...|..|.+.| ++|+++++.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAG--YALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTT--CEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCC--CeEEEEcCCH
Confidence 4579999999999999999999987 8999998863
No 476
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=90.46 E-value=0.26 Score=44.35 Aligned_cols=31 Identities=19% Similarity=0.297 Sum_probs=28.9
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDR 52 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~ 52 (334)
|+|.|||+|..|...|..|.+.+ .+|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g--~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG--NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC--CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC--CeEEEEEc
Confidence 58999999999999999999987 89999987
No 477
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.46 E-value=0.3 Score=42.70 Aligned_cols=34 Identities=12% Similarity=-0.011 Sum_probs=30.9
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
+++|+|.|+|..|-..+..|.+.+ ++|+++.+.+
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g--~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQG--WRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGT--CEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCC--CEEEEEEcCh
Confidence 479999999999999999999997 9999998864
No 478
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=90.44 E-value=0.18 Score=39.56 Aligned_cols=34 Identities=21% Similarity=0.378 Sum_probs=29.4
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
+++|+|||+|.+|..++..|.. .|.+ |+++.|..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~--------------------~g~~-v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY--------------------PQYK-VTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT--------------------TTCE-EEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh--------------------CCCE-EEEEcCCH
Confidence 6899999999999999998885 6776 99988863
No 479
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.44 E-value=0.31 Score=40.76 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=29.1
Q ss_pred CeEEEEC-CchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 20 LRVCVVG-SGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 20 ~~vvIIG-aG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
|+|+||| +|..|...|..|.+.+ .+|++++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g--~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG--HEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT--CEEEEEESS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC--CEEEEEeCC
Confidence 5899999 9999999999999986 899999875
No 480
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=90.41 E-value=0.16 Score=48.11 Aligned_cols=35 Identities=23% Similarity=0.179 Sum_probs=29.2
Q ss_pred CeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCC-cceEEEEeecCc
Q 019876 160 DTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSS-IRKVYLVGRRGP 214 (334)
Q Consensus 160 k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~Vtiv~r~~~ 214 (334)
.+|+|||+|.+|+-+|..|++ .| ..+|+|+++++.
T Consensus 5 ~~v~IiGaG~~Gl~~A~~L~~--------------------~g~~~~v~v~E~~~~ 40 (475)
T 3lov_A 5 KRLVIVGGGITGLAAAYYAER--------------------AFPDLNITLLEAGER 40 (475)
T ss_dssp CEEEEECCBHHHHHHHHHHHH--------------------HCTTSEEEEECSSSS
T ss_pred ccEEEECCCHHHHHHHHHHHH--------------------hCCCCCEEEEECCCC
Confidence 589999999999999999996 45 136999998654
No 481
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.39 E-value=0.2 Score=42.49 Aligned_cols=35 Identities=26% Similarity=0.287 Sum_probs=30.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEE-EcCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDI-IDRLP 54 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~v-ie~~~ 54 (334)
.+++|.|||+|..|...|..|.+.+ .+|++ +++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g--~~V~~v~~r~~ 57 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQ--IPAIIANSRGP 57 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTT--CCEEEECTTCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCC--CEEEEEECCCH
Confidence 3579999999999999999999987 88988 77653
No 482
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.36 E-value=0.36 Score=43.47 Aligned_cols=36 Identities=22% Similarity=0.255 Sum_probs=30.4
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||+|..|.+.|..++..+...+|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 457999999999999999999887633489999975
No 483
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.36 E-value=0.32 Score=43.57 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=30.4
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
.++|.|||+|..|...|..|.+.+ .+|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g--~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG--HTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT--CCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC--CEEEEEeCCH
Confidence 478999999999999999999886 8999998763
No 484
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.36 E-value=0.42 Score=43.38 Aligned_cols=36 Identities=22% Similarity=0.342 Sum_probs=30.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||+|..|..+|..++..+--.+++++|..
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 568999999999999999999988622289999975
No 485
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.33 E-value=0.22 Score=44.07 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=30.5
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
++|.|||.|..|...|..|.+.+ ++|+++++++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G--~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG--FDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT--CCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCC--CeEEEEcCCH
Confidence 58999999999999999999997 8999999874
No 486
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.32 E-value=0.35 Score=43.58 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=30.1
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
.+++|+|||+|..|..+|..|...+.-.+++++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 457999999999999999999887533489999865
No 487
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.27 E-value=0.31 Score=43.88 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=28.6
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
..++|+|||+|..|...|..|.+.+ .+|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G--~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAG--HEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTT--CEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCC--CeEEEE-Ec
Confidence 4689999999999999999999987 899999 54
No 488
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=90.26 E-value=0.17 Score=47.20 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=28.7
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcC-CcceEEEEeecCc
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGS-SIRKVYLVGRRGP 214 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~Vtiv~r~~~ 214 (334)
..+|+|||+|..|+-+|..|++ . |. +|+|++++++
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~--------------------~~g~-~v~v~E~~~~ 42 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVAT--------------------QLDK-RVLVLERRPH 42 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHH--------------------HSCC-CEEEECSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHH--------------------hCCC-CEEEEeCCCC
Confidence 3579999999999999999986 4 54 5888887753
No 489
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.25 E-value=0.41 Score=42.60 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=31.0
Q ss_pred CCCeEEEEC-CchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 18 NPLRVCVVG-SGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 18 ~~~~vvIIG-aG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
..++|.||| +|..|.+.|..|.+.+ .+|+++++++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G--~~V~~~~~~~ 55 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG--YPISILDRED 55 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT--CCEEEECTTC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC--CeEEEEECCc
Confidence 346899999 9999999999999987 8999999764
No 490
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.24 E-value=0.34 Score=43.31 Aligned_cols=34 Identities=24% Similarity=0.323 Sum_probs=30.5
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCC-eEEEEcCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEA-QVDIIDRL 53 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~-~v~vie~~ 53 (334)
..++++|||+|.+|..+|..|.+.+ . +|+|+++.
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G--~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTA--AERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCC--CCEEEEEeCC
Confidence 4679999999999999999999987 6 89999875
No 491
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.24 E-value=0.81 Score=44.26 Aligned_cols=72 Identities=13% Similarity=0.068 Sum_probs=49.9
Q ss_pred CCCeEEEECCchHHHHH-HHHHhhcCCCCeEEEEcCCCCCccccccccCCCCcchhHHHHHHHHHhhcCCcEEEeCeEEc
Q 019876 18 NPLRVCVVGSGPAGFYT-AEKTLKAHQEAQVDIIDRLPTPFGLVRSGVAPDHPETKIVINQFSRVVQHERCSFFGNVTLG 96 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~a-A~~l~~~~~~~~v~vie~~~~~gg~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~~~~~~v~ 96 (334)
+.++|.+||.|-+||++ |..|.++| ++|++.|.... +. ..+.++..|+++..+..
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G--~~V~~sD~~~~----------~~----------~~~~L~~~gi~~~~G~~-- 73 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALG--HTVTGSDANIY----------PP----------MSTQLEQAGVTIEEGYL-- 73 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCC----------TT----------HHHHHHHTTCEEEESCC--
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCC--CEEEEECCCCC----------cH----------HHHHHHHCCCEEECCCC--
Confidence 35799999999999985 77778887 99999998642 11 12234556888765532
Q ss_pred eEEecccceeccCeEEEeccC
Q 019876 97 SSVSLSELRQLYHVVVLAYGA 117 (334)
Q Consensus 97 ~~v~~~~~~~~yd~lIlATGs 117 (334)
.......+|.||+..|.
T Consensus 74 ----~~~~~~~~d~vV~Spgi 90 (524)
T 3hn7_A 74 ----IAHLQPAPDLVVVGNAM 90 (524)
T ss_dssp ----GGGGCSCCSEEEECTTC
T ss_pred ----HHHcCCCCCEEEECCCc
Confidence 11222358999999987
No 492
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.22 E-value=0.34 Score=43.93 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=30.8
Q ss_pred CCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 17 SNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 17 ~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
...++|+|||+|..|.++|..|...+.-.+++++|..
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 3567999999999999999999988622389999874
No 493
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.21 E-value=0.42 Score=43.43 Aligned_cols=38 Identities=21% Similarity=0.351 Sum_probs=31.2
Q ss_pred CCCCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCC
Q 019876 16 SSNPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRL 53 (334)
Q Consensus 16 ~~~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~ 53 (334)
....++|+|||+|..|.+.|..|...+...+++++|..
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 44678999999999999999999887622389999875
No 494
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.16 E-value=0.32 Score=45.88 Aligned_cols=35 Identities=14% Similarity=0.301 Sum_probs=30.9
Q ss_pred CCCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 18 NPLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 18 ~~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
..++|.|||+|..|+..|..|++ + .+|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G--~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-N--HEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-T--SEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-C--CeEEEEecCHH
Confidence 45799999999999999999887 6 99999998754
No 495
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.13 E-value=0.27 Score=43.78 Aligned_cols=35 Identities=20% Similarity=0.199 Sum_probs=31.7
Q ss_pred CCeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCCC
Q 019876 19 PLRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLPT 55 (334)
Q Consensus 19 ~~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~~ 55 (334)
.++|.|||.|..|...|..|.+.+ ++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G--~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP--GGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST--TCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC--CeEEEEeCCHH
Confidence 468999999999999999999997 89999998754
No 496
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=90.11 E-value=0.26 Score=45.36 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=27.1
Q ss_pred eEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 161 TAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 161 ~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
+|+|||+|..|+-+|..|++ .|. +|+|+++++
T Consensus 3 ~v~iiG~G~~Gl~~A~~l~~--------------------~g~-~v~v~E~~~ 34 (367)
T 1i8t_A 3 DYIIVGSGLFGAVCANELKK--------------------LNK-KVLVIEKRN 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHGG--------------------GTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHh--------------------CCC-cEEEEecCC
Confidence 68999999999999999996 454 588888764
No 497
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.10 E-value=0.36 Score=40.17 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.7
Q ss_pred CeEEEECC-chHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGS-GPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGa-G~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|+|.|| |..|...+..|.+.+ ++|+++.+++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g--~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG--HEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC--CEEEEEEcCc
Confidence 58999996 999999999999997 9999998863
No 498
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=90.06 E-value=0.24 Score=49.41 Aligned_cols=36 Identities=31% Similarity=0.419 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecCc
Q 019876 158 STDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRGP 214 (334)
Q Consensus 158 ~~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~~ 214 (334)
.+++|+|||+|..|+-+|..|.+ .|. +|+|++++++
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~--------------------~g~-~v~~~e~~~~ 141 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQS--------------------FGM-DVTLLEARDR 141 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHH--------------------TTC-EEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHH--------------------CCC-eEEEEecCCC
Confidence 56899999999999999999986 565 6999998754
No 499
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.04 E-value=0.28 Score=45.77 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=29.3
Q ss_pred CeEEEECCchHHHHHHHHHhhcCCCCeEEEEcCCC
Q 019876 20 LRVCVVGSGPAGFYTAEKTLKAHQEAQVDIIDRLP 54 (334)
Q Consensus 20 ~~vvIIGaG~aGl~aA~~l~~~~~~~~v~vie~~~ 54 (334)
|+|.|||+|..|+..|..|.+ + .+|+++++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G--~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q--NEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T--SEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-C--CEEEEEECCH
Confidence 589999999999999999998 7 8999999864
No 500
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=90.04 E-value=0.25 Score=47.88 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=29.2
Q ss_pred CCeEEEEcCCHHHHHHHHHHccCCcccccccccHHHHHHHhcCCcceEEEEeecC
Q 019876 159 TDTAVILGQGNVALDVARILLRPTEELATTDIASYAWTALEGSSIRKVYLVGRRG 213 (334)
Q Consensus 159 ~k~vvVIG~G~~g~e~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~Vtiv~r~~ 213 (334)
..+|+|||||.+|+-+|..|++.. ..|. +|+|+++..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~-----------------~~G~-~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRAL-----------------QQQA-NITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-----------------CSSC-EEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhc-----------------CCCC-EEEEECCCC
Confidence 368999999999999999998400 0365 699999964
Done!